Query 002826
Match_columns 876
No_of_seqs 741 out of 6481
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 03:09:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002826.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002826hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 7.8E-67 2.7E-71 636.4 38.4 482 25-516 8-751 (768)
2 4ecn_A Leucine-rich repeat pro 100.0 1.2E-56 4E-61 542.5 31.1 463 27-508 267-870 (876)
3 4eco_A Uncharacterized protein 100.0 2.6E-56 8.9E-61 531.4 32.5 460 28-505 29-601 (636)
4 3t6q_A CD180 antigen; protein- 100.0 1.2E-51 4.2E-56 490.8 34.5 443 62-508 14-564 (606)
5 3j0a_A TOLL-like receptor 5; m 100.0 2.6E-50 8.9E-55 495.9 34.7 443 60-510 14-566 (844)
6 3rgz_A Protein brassinosteroid 100.0 3.8E-51 1.3E-55 498.2 25.5 404 76-483 224-742 (768)
7 1ziw_A TOLL-like receptor 3; i 100.0 1.6E-49 5.5E-54 479.1 36.8 447 60-509 4-627 (680)
8 4asz_A BDNF/NT-3 growth factor 100.0 1.9E-51 6.6E-56 438.6 13.3 253 587-858 19-290 (299)
9 3omv_A RAF proto-oncogene seri 100.0 1.9E-50 6.3E-55 430.8 19.7 256 587-859 42-302 (307)
10 4gt4_A Tyrosine-protein kinase 100.0 9E-51 3.1E-55 435.4 16.1 251 587-856 32-305 (308)
11 4aoj_A High affinity nerve gro 100.0 1.1E-50 3.7E-55 438.9 16.6 253 587-858 47-320 (329)
12 3vq2_A TLR4, TOLL-like recepto 100.0 7.7E-49 2.6E-53 466.8 31.5 437 64-509 15-563 (606)
13 4eco_A Uncharacterized protein 100.0 1.1E-48 3.7E-53 465.7 24.5 451 26-503 24-578 (636)
14 4fih_A Serine/threonine-protei 100.0 3.4E-48 1.2E-52 418.4 22.2 249 582-851 75-324 (346)
15 4g3f_A NF-kappa-beta-inducing 100.0 2.5E-48 8.6E-53 418.2 20.3 250 586-858 63-317 (336)
16 4b9d_A Serine/threonine-protei 100.0 4.9E-49 1.7E-53 425.6 14.3 247 583-850 26-276 (350)
17 3t6q_A CD180 antigen; protein- 100.0 6.5E-47 2.2E-51 450.1 31.7 409 76-487 58-565 (606)
18 2z81_A CD282 antigen, TOLL-lik 100.0 1.2E-47 4E-52 451.1 22.4 428 59-508 3-514 (549)
19 2z63_A TOLL-like receptor 4, v 100.0 1.4E-46 4.8E-51 444.0 31.1 415 76-509 29-536 (570)
20 3fpq_A Serine/threonine-protei 100.0 1.7E-47 5.8E-52 405.0 19.0 242 588-850 33-282 (290)
21 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.1E-48 7.2E-53 413.7 12.0 246 583-849 34-283 (311)
22 4fie_A Serine/threonine-protei 100.0 4.9E-47 1.7E-51 419.4 22.9 249 582-851 152-401 (423)
23 3hmm_A TGF-beta receptor type- 100.0 2.1E-47 7.2E-52 410.5 18.1 263 587-860 9-300 (303)
24 3hyh_A Carbon catabolite-derep 100.0 3.2E-47 1.1E-51 399.3 17.2 243 584-850 15-262 (275)
25 4ase_A Vascular endothelial gr 100.0 1.2E-47 4.2E-52 418.3 12.6 257 586-859 68-349 (353)
26 3vq2_A TLR4, TOLL-like recepto 100.0 6.1E-46 2.1E-50 441.8 28.1 401 76-488 57-564 (606)
27 3j0a_A TOLL-like receptor 5; m 100.0 1.5E-45 5E-50 453.6 31.2 417 83-504 12-539 (844)
28 4ecn_A Leucine-rich repeat pro 100.0 4.6E-46 1.6E-50 450.0 26.0 395 99-504 323-840 (876)
29 1ziw_A TOLL-like receptor 3; i 100.0 1E-44 3.5E-49 437.2 34.2 410 76-487 98-627 (680)
30 3ubd_A Ribosomal protein S6 ki 100.0 5.3E-47 1.8E-51 403.1 9.9 245 583-850 26-281 (304)
31 4g31_A Eukaryotic translation 100.0 2.5E-45 8.5E-50 392.2 18.5 248 582-850 6-279 (299)
32 2z63_A TOLL-like receptor 4, v 100.0 3.4E-44 1.2E-48 423.6 29.0 401 76-488 53-537 (570)
33 2z7x_B TOLL-like receptor 1, v 100.0 5E-45 1.7E-49 425.6 20.5 407 76-508 22-485 (520)
34 4g8a_A TOLL-like receptor 4; l 100.0 2.2E-43 7.5E-48 422.0 32.2 431 64-509 35-585 (635)
35 3v47_A TOLL-like receptor 5B a 100.0 2.9E-43 1E-47 403.5 26.1 362 99-486 30-412 (455)
36 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.3E-42 4.3E-47 408.9 26.7 403 79-508 35-514 (562)
37 2z7x_B TOLL-like receptor 1, v 100.0 9E-44 3.1E-48 414.9 16.3 386 76-486 46-485 (520)
38 3v47_A TOLL-like receptor 5B a 100.0 3.3E-42 1.1E-46 394.8 26.5 357 137-508 34-412 (455)
39 4b99_A Mitogen-activated prote 100.0 1E-42 3.6E-47 386.2 20.4 261 583-851 56-345 (398)
40 4f9c_A Cell division cycle 7-r 100.0 2E-42 6.9E-47 379.9 21.0 258 584-850 23-352 (361)
41 2z81_A CD282 antigen, TOLL-lik 100.0 2E-42 6.7E-47 406.5 21.6 399 76-486 51-514 (549)
42 1ogq_A PGIP-2, polygalacturona 100.0 1.9E-42 6.5E-47 375.4 19.3 295 25-362 2-302 (313)
43 3uto_A Twitchin; kinase, muscl 100.0 4.2E-42 1.4E-46 400.3 17.6 256 577-851 153-411 (573)
44 2qkw_B Protein kinase; three-h 100.0 2.3E-41 8E-46 368.8 20.6 273 582-859 40-317 (321)
45 3v5w_A G-protein coupled recep 100.0 1.9E-41 6.6E-46 390.8 19.0 246 583-850 191-449 (689)
46 1jl5_A Outer protein YOPM; leu 100.0 9.9E-41 3.4E-45 380.0 23.2 364 76-483 12-410 (454)
47 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 7E-40 2.4E-44 385.5 28.7 399 76-487 53-515 (562)
48 3uim_A Brassinosteroid insensi 100.0 2.2E-40 7.4E-45 362.1 18.7 283 572-856 18-310 (326)
49 3bz5_A Internalin-J, INLJ; leu 100.0 2.2E-39 7.4E-44 369.3 27.1 350 89-491 32-396 (457)
50 3fxz_A Serine/threonine-protei 100.0 6.8E-40 2.3E-44 352.8 20.9 254 577-851 16-270 (297)
51 3s95_A LIMK-1, LIM domain kina 100.0 2.1E-40 7.2E-45 359.5 16.9 255 587-858 16-283 (310)
52 3kul_A Ephrin type-A receptor 100.0 1.3E-40 4.6E-45 363.1 13.7 265 581-863 48-319 (325)
53 4hcu_A Tyrosine-protein kinase 100.0 3.7E-40 1.3E-44 349.8 16.6 254 584-858 13-267 (269)
54 2psq_A Fibroblast growth facto 100.0 3.9E-40 1.3E-44 365.8 16.8 253 586-857 86-364 (370)
55 2nru_A Interleukin-1 receptor- 100.0 2.9E-39 9.8E-44 350.0 22.9 264 587-857 37-306 (307)
56 1o6v_A Internalin A; bacterial 100.0 6.2E-39 2.1E-43 368.2 26.8 342 77-460 48-389 (466)
57 3sxs_A Cytoplasmic tyrosine-pr 100.0 4E-40 1.4E-44 349.3 15.6 254 585-859 12-266 (268)
58 2id5_A Lingo-1, leucine rich r 100.0 3.8E-39 1.3E-43 371.6 24.5 316 139-459 17-333 (477)
59 3p86_A Serine/threonine-protei 100.0 1E-39 3.5E-44 353.4 18.5 256 585-861 41-302 (309)
60 3soc_A Activin receptor type-2 100.0 1.1E-39 3.9E-44 355.5 18.1 266 585-859 28-320 (322)
61 3o6n_A APL1; leucine-rich repe 100.0 1.6E-38 5.4E-43 356.3 27.2 376 47-509 2-379 (390)
62 2izr_A Casein kinase I isoform 100.0 4E-39 1.4E-43 352.6 21.5 271 583-871 11-295 (330)
63 3gen_A Tyrosine-protein kinase 100.0 1.3E-39 4.4E-44 348.3 17.0 255 584-859 27-282 (283)
64 4eqm_A Protein kinase; transfe 100.0 4E-39 1.4E-43 346.4 20.2 264 582-861 11-279 (294)
65 2qol_A Ephrin receptor; recept 100.0 4.8E-40 1.6E-44 365.4 13.5 261 583-862 47-314 (373)
66 1o6v_A Internalin A; bacterial 100.0 2.8E-38 9.6E-43 362.8 28.4 346 96-483 43-389 (466)
67 3zgw_A Maternal embryonic leuc 100.0 1.3E-39 4.3E-44 357.2 16.4 253 577-851 6-261 (347)
68 3fe3_A MAP/microtubule affinit 100.0 1.6E-39 5.3E-44 354.4 16.9 245 583-851 17-265 (328)
69 1csn_A Casein kinase-1; phosph 100.0 4.2E-39 1.4E-43 347.0 19.7 270 583-868 12-294 (298)
70 3cbl_A C-FES, proto-oncogene t 100.0 1.9E-40 6.4E-45 369.7 9.5 255 586-859 119-376 (377)
71 3ugc_A Tyrosine-protein kinase 100.0 1.2E-40 4.1E-45 358.6 7.2 264 583-858 11-292 (295)
72 2id5_A Lingo-1, leucine rich r 100.0 1.4E-38 4.8E-43 366.8 24.6 336 99-471 32-368 (477)
73 2yab_A Death-associated protei 100.0 7.1E-39 2.4E-43 353.5 20.8 253 578-850 9-272 (361)
74 3tt0_A Basic fibroblast growth 100.0 1.9E-39 6.6E-44 362.3 15.7 261 584-862 71-357 (382)
75 1luf_A Muscle-specific tyrosin 100.0 1.3E-39 4.6E-44 358.5 14.2 259 583-860 49-338 (343)
76 1tki_A Titin; serine kinase, m 100.0 2.5E-39 8.6E-44 352.2 16.0 250 582-851 6-258 (321)
77 3lb7_A RAF proto-oncogene seri 100.0 2.8E-39 9.7E-44 349.7 16.3 259 586-861 41-304 (307)
78 3op5_A Serine/threonine-protei 100.0 6.9E-39 2.4E-43 355.6 19.3 278 582-869 36-341 (364)
79 3tki_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 351.8 16.2 252 582-851 8-262 (323)
80 3niz_A Rhodanese family protei 100.0 1.3E-38 4.5E-43 345.2 20.8 265 578-850 18-300 (311)
81 3l9p_A Anaplastic lymphoma kin 100.0 1.4E-39 4.6E-44 361.2 12.9 257 585-860 75-348 (367)
82 3q4u_A Activin receptor type-1 100.0 1.1E-38 3.7E-43 344.3 19.6 260 582-855 9-300 (301)
83 1kob_A Twitchin; kinase, intra 100.0 1.2E-38 4.1E-43 354.8 20.4 265 568-851 38-305 (387)
84 2c30_A Serine/threonine-protei 100.0 4.3E-38 1.5E-42 342.6 24.3 245 586-851 50-295 (321)
85 3vhe_A Vascular endothelial gr 100.0 1.9E-39 6.5E-44 359.6 12.9 256 585-858 26-356 (359)
86 2y0a_A Death-associated protei 100.0 3.2E-38 1.1E-42 344.5 22.3 254 578-851 8-272 (326)
87 3og7_A AKAP9-BRAF fusion prote 100.0 5.1E-39 1.7E-43 344.8 15.6 266 577-858 19-289 (289)
88 4f0f_A Serine/threonine-protei 100.0 2.3E-38 8E-43 339.3 20.4 249 585-855 22-287 (287)
89 1o6l_A RAC-beta serine/threoni 100.0 1.5E-38 5.2E-43 347.6 19.2 246 583-851 7-261 (337)
90 3poz_A Epidermal growth factor 100.0 4.2E-39 1.4E-43 351.8 14.8 256 583-858 17-279 (327)
91 4euu_A Serine/threonine-protei 100.0 4.4E-38 1.5E-42 342.6 22.6 268 583-857 10-309 (319)
92 3t9t_A Tyrosine-protein kinase 100.0 6.7E-39 2.3E-43 339.6 15.3 252 586-858 13-265 (267)
93 2ivs_A Proto-oncogene tyrosine 100.0 4.7E-39 1.6E-43 349.4 13.2 256 585-858 26-312 (314)
94 3oja_B Anopheles plasmodium-re 100.0 1.4E-37 4.9E-42 367.8 26.9 337 96-509 48-385 (597)
95 1rjb_A FL cytokine receptor; k 100.0 5.9E-39 2E-43 353.5 14.0 261 583-861 47-338 (344)
96 1qcf_A Haematopoetic cell kina 100.0 8.9E-39 3E-43 365.0 15.9 251 587-859 194-446 (454)
97 4e5w_A Tyrosine-protein kinase 100.0 2.1E-39 7.1E-44 350.2 10.1 270 574-856 13-301 (302)
98 3qup_A Tyrosine-protein kinase 100.0 6.1E-39 2.1E-43 350.1 13.5 257 585-859 26-300 (323)
99 1jl5_A Outer protein YOPM; leu 100.0 2E-37 6.7E-42 352.8 26.4 357 78-487 37-434 (454)
100 3o0g_A Cell division protein k 100.0 6.4E-38 2.2E-42 336.8 20.9 260 584-850 5-282 (292)
101 1ob3_A PFPK5, cell division co 100.0 3.6E-38 1.2E-42 338.0 18.8 258 585-850 6-280 (288)
102 3kex_A Receptor tyrosine-prote 100.0 5.7E-39 1.9E-43 350.5 12.8 254 585-858 17-277 (325)
103 2v62_A Serine/threonine-protei 100.0 2.3E-38 7.7E-43 348.8 17.6 269 582-862 37-333 (345)
104 1t46_A HOMO sapiens V-KIT hard 100.0 1.2E-38 4.1E-43 346.0 15.1 255 586-858 28-308 (313)
105 2x4f_A Myosin light chain kina 100.0 4.2E-38 1.4E-42 349.6 19.3 244 588-850 96-342 (373)
106 2eva_A TAK1 kinase - TAB1 chim 100.0 3.4E-38 1.2E-42 341.4 17.8 251 586-860 13-266 (307)
107 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.8E-38 6.1E-43 346.7 15.7 244 584-851 11-259 (336)
108 4g8a_A TOLL-like receptor 4; l 100.0 4.1E-37 1.4E-41 367.7 28.8 393 76-486 77-584 (635)
109 1mp8_A Focal adhesion kinase 1 100.0 6.5E-39 2.2E-43 342.5 11.9 255 584-858 17-277 (281)
110 3soa_A Calcium/calmodulin-depe 100.0 9.8E-38 3.4E-42 353.4 22.2 256 577-851 7-268 (444)
111 3lxl_A Tyrosine-protein kinase 100.0 2.6E-39 8.8E-44 353.7 8.3 264 585-862 27-308 (327)
112 3c0i_A Peripheral plasma membr 100.0 3.7E-38 1.3E-42 347.6 17.3 249 583-850 26-286 (351)
113 2bdw_A Hypothetical protein K1 100.0 1.6E-37 5.4E-42 343.6 21.9 252 580-851 28-285 (362)
114 2w4o_A Calcium/calmodulin-depe 100.0 9.8E-38 3.3E-42 343.8 20.1 248 583-851 55-306 (349)
115 1k9a_A Carboxyl-terminal SRC k 100.0 3.9E-38 1.3E-42 359.1 17.4 246 586-858 198-446 (450)
116 4dc2_A Protein kinase C IOTA t 100.0 4.5E-38 1.5E-42 350.1 17.4 246 582-845 53-307 (396)
117 1p4o_A Insulin-like growth fac 100.0 1.8E-38 6E-43 346.3 13.8 258 583-859 27-301 (322)
118 3bz5_A Internalin-J, INLJ; leu 100.0 3.2E-37 1.1E-41 351.3 24.6 339 76-468 43-396 (457)
119 1opk_A P150, C-ABL, proto-onco 100.0 2.5E-38 8.7E-43 364.7 15.4 255 585-860 224-481 (495)
120 4fvq_A Tyrosine-protein kinase 100.0 1.1E-38 3.6E-43 342.3 11.4 250 586-861 13-279 (289)
121 3dtc_A Mitogen-activated prote 100.0 2.2E-38 7.6E-43 336.4 13.8 248 586-855 12-271 (271)
122 4fr4_A YANK1, serine/threonine 100.0 1.4E-37 4.7E-42 345.1 20.6 247 583-850 17-271 (384)
123 3lzb_A Epidermal growth factor 100.0 3E-38 1E-42 344.8 14.9 256 583-858 17-279 (327)
124 4hgt_A Casein kinase I isoform 100.0 9.2E-38 3.2E-42 336.1 18.5 263 583-862 11-285 (296)
125 3uzp_A CKI-delta, CKID, casein 100.0 1.2E-37 4.1E-42 335.2 19.4 264 582-862 10-285 (296)
126 2pvf_A Fibroblast growth facto 100.0 2.5E-38 8.5E-43 346.9 14.1 257 585-860 39-321 (334)
127 3qd2_B Eukaryotic translation 100.0 1.6E-37 5.5E-42 340.0 20.5 249 582-851 7-326 (332)
128 1mqb_A Ephrin type-A receptor 100.0 4.7E-38 1.6E-42 344.3 16.0 257 587-862 50-314 (333)
129 1u59_A Tyrosine-protein kinase 100.0 3.6E-38 1.2E-42 337.9 14.8 252 588-859 17-274 (287)
130 4aw2_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 356.1 14.9 254 582-851 75-339 (437)
131 2jii_A Serine/threonine-protei 100.0 4.9E-38 1.7E-42 347.2 16.0 273 582-869 43-348 (352)
132 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.8E-38 9.5E-43 360.5 14.5 253 587-861 190-444 (452)
133 3txo_A PKC-L, NPKC-ETA, protei 100.0 2E-38 6.9E-43 349.0 12.7 245 583-850 25-280 (353)
134 2pmi_A Negative RE, cyclin-dep 100.0 1.9E-37 6.5E-42 337.1 20.3 260 583-851 7-294 (317)
135 3lxp_A Non-receptor tyrosine-p 100.0 1.1E-38 3.8E-43 347.1 10.5 264 582-860 31-313 (318)
136 3f3z_A Calcium/calmodulin-depe 100.0 2.2E-37 7.4E-42 329.9 20.1 252 578-850 6-261 (277)
137 1fot_A TPK1 delta, CAMP-depend 100.0 9.2E-38 3.2E-42 338.9 17.5 243 583-851 8-259 (318)
138 3kfa_A Tyrosine-protein kinase 100.0 4.1E-38 1.4E-42 337.5 14.6 258 582-860 14-274 (288)
139 3g33_A Cell division protein k 100.0 3.4E-37 1.2E-41 333.8 21.6 264 579-850 6-296 (308)
140 4eut_A Serine/threonine-protei 100.0 5.2E-38 1.8E-42 352.4 15.7 271 583-860 10-312 (396)
141 2yex_A Serine/threonine-protei 100.0 1.9E-37 6.4E-42 330.1 19.1 252 582-851 8-262 (276)
142 3mdy_A Bone morphogenetic prot 100.0 6.8E-37 2.3E-41 335.9 23.4 269 581-860 37-334 (337)
143 3uc3_A Serine/threonine-protei 100.0 4.7E-37 1.6E-41 339.9 22.2 251 582-851 21-275 (361)
144 3brb_A Proto-oncogene tyrosine 100.0 8.1E-38 2.8E-42 339.6 15.8 260 582-859 34-310 (313)
145 3ork_A Serine/threonine protei 100.0 3.7E-38 1.3E-42 341.9 13.0 264 580-860 11-284 (311)
146 2a2a_A Death-associated protei 100.0 2.9E-37 1E-41 336.4 20.2 254 578-851 9-273 (321)
147 1xjd_A Protein kinase C, theta 100.0 4.6E-38 1.6E-42 344.7 13.7 244 583-849 19-268 (345)
148 2eue_A Carbon catabolite derep 100.0 1.1E-37 3.9E-42 331.8 16.3 244 582-850 14-262 (275)
149 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.2E-37 4.1E-42 342.5 17.0 244 582-851 42-294 (350)
150 3a8x_A Protein kinase C IOTA t 100.0 1.2E-37 4.2E-42 341.9 17.0 245 583-845 11-264 (345)
151 3dbq_A Dual specificity protei 100.0 1.7E-37 5.8E-42 341.5 18.1 249 584-851 11-274 (343)
152 3gxj_A TGF-beta receptor type- 100.0 8.4E-39 2.9E-43 345.5 7.5 262 585-860 7-300 (303)
153 3gni_B Strad alpha; kinase fol 100.0 2.1E-37 7.1E-42 347.0 19.0 270 583-856 27-341 (389)
154 1b6c_B TGF-B superfamily recep 100.0 3.4E-37 1.2E-41 339.0 20.3 263 582-860 43-339 (342)
155 3c1x_A Hepatocyte growth facto 100.0 4.4E-38 1.5E-42 349.2 13.1 257 587-862 95-360 (373)
156 2ac3_A MAP kinase-interacting 100.0 7.4E-37 2.5E-41 332.5 22.4 254 587-851 18-296 (316)
157 3kmu_A ILK, integrin-linked ki 100.0 5.8E-38 2E-42 333.0 13.3 248 585-858 14-271 (271)
158 2yfx_A Tyrosine-protein kinase 100.0 5.8E-38 2E-42 342.9 13.7 260 584-861 32-308 (327)
159 3kn6_A Ribosomal protein S6 ki 100.0 1.8E-37 6.2E-42 338.2 17.5 247 588-851 18-271 (325)
160 3cok_A Serine/threonine-protei 100.0 2E-37 6.8E-42 330.4 17.3 247 582-850 12-262 (278)
161 2xir_A Vascular endothelial gr 100.0 6.3E-38 2.1E-42 340.9 13.6 258 584-858 29-311 (316)
162 2zv2_A Calcium/calmodulin-depe 100.0 1.2E-37 4.2E-42 335.6 15.7 246 583-850 15-292 (298)
163 3is5_A Calcium-dependent prote 100.0 2.3E-37 8E-42 331.1 17.7 253 577-850 18-278 (285)
164 2buj_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 339.3 15.2 261 584-861 32-310 (317)
165 2ozo_A Tyrosine-protein kinase 100.0 1.1E-37 3.9E-42 367.7 16.6 251 588-858 343-599 (613)
166 3f66_A Hepatocyte growth facto 100.0 1.1E-37 3.8E-42 336.0 15.1 255 587-860 31-294 (298)
167 3p1a_A MYT1 kinase, membrane-a 100.0 2.7E-37 9.2E-42 335.0 18.1 243 582-850 58-304 (311)
168 1nxk_A MAP kinase-activated pr 100.0 2E-37 6.7E-42 347.5 17.6 256 574-851 54-322 (400)
169 3a62_A Ribosomal protein S6 ki 100.0 1.3E-37 4.4E-42 339.8 15.7 245 583-850 19-276 (327)
170 2wqm_A Serine/threonine-protei 100.0 4E-37 1.4E-41 333.7 19.4 260 582-859 33-299 (310)
171 2y94_A 5'-AMP-activated protei 100.0 1.3E-37 4.4E-42 354.7 16.2 247 581-850 15-266 (476)
172 1qpc_A LCK kinase; alpha beta 100.0 1.1E-37 3.8E-42 332.6 14.3 254 583-858 15-270 (279)
173 2h34_A Serine/threonine-protei 100.0 7.9E-37 2.7E-41 331.0 21.2 262 581-861 34-300 (309)
174 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.9E-37 1.3E-41 341.7 19.1 248 585-859 69-341 (365)
175 2zmd_A Dual specificity protei 100.0 5.5E-37 1.9E-41 342.9 20.5 249 583-851 58-321 (390)
176 3pls_A Macrophage-stimulating 100.0 2.4E-37 8.3E-42 333.2 16.9 256 587-860 27-290 (298)
177 3hko_A Calcium/calmodulin-depe 100.0 5.9E-37 2E-41 337.6 20.2 259 576-850 21-330 (345)
178 2i1m_A Macrophage colony-stimu 100.0 3E-38 1E-42 346.1 9.8 260 583-860 48-329 (333)
179 3v8s_A RHO-associated protein 100.0 3.5E-37 1.2E-41 344.9 18.5 251 582-851 70-330 (410)
180 2i0e_A Protein kinase C-beta I 100.0 1.7E-37 5.7E-42 341.4 15.6 247 582-851 21-277 (353)
181 2w1i_A JAK2; chromosomal rearr 100.0 1.6E-38 5.4E-43 347.2 7.1 263 584-858 43-323 (326)
182 3ttj_A Mitogen-activated prote 100.0 4.3E-37 1.5E-41 351.0 19.1 258 582-851 63-356 (464)
183 3cc6_A Protein tyrosine kinase 100.0 1E-37 3.4E-42 333.3 12.9 251 586-857 17-273 (281)
184 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-37 3.6E-42 362.9 13.7 253 587-861 273-527 (535)
185 4agu_A Cyclin-dependent kinase 100.0 8.3E-37 2.8E-41 331.3 19.8 260 583-851 5-285 (311)
186 3llt_A Serine/threonine kinase 100.0 7.9E-37 2.7E-41 338.7 19.9 267 572-850 25-355 (360)
187 1u5q_A Serine/threonine protei 100.0 3E-37 1E-41 339.4 16.4 247 582-853 55-308 (348)
188 3dls_A PAS domain-containing s 100.0 2.8E-37 9.5E-42 338.2 15.9 245 577-851 20-275 (335)
189 2vd5_A DMPK protein; serine/th 100.0 4.1E-37 1.4E-41 344.5 17.6 253 582-851 62-328 (412)
190 1xbb_A Tyrosine-protein kinase 100.0 1.9E-37 6.5E-42 332.9 14.3 250 588-858 24-280 (291)
191 3fdn_A Serine/threonine-protei 100.0 3E-37 1E-41 329.2 15.5 242 585-851 13-258 (279)
192 2jam_A Calcium/calmodulin-depe 100.0 1.7E-36 5.9E-41 327.6 21.6 252 579-851 7-262 (304)
193 1byg_A CSK, protein (C-termina 100.0 1.2E-37 4E-42 332.2 12.1 249 583-858 23-274 (278)
194 3kk8_A Calcium/calmodulin depe 100.0 1.8E-36 6.1E-41 324.1 21.2 250 582-851 7-262 (284)
195 1fvr_A Tyrosine-protein kinase 100.0 3.9E-37 1.3E-41 336.3 16.1 254 586-861 30-304 (327)
196 4ejn_A RAC-alpha serine/threon 100.0 1.6E-37 5.6E-42 354.1 13.6 245 583-850 150-404 (446)
197 3mtl_A Cell division protein k 100.0 2.3E-37 7.8E-42 337.6 14.2 258 584-850 5-281 (324)
198 2r5t_A Serine/threonine-protei 100.0 2.4E-37 8.1E-42 342.6 14.4 248 582-852 39-291 (373)
199 4fl3_A Tyrosine-protein kinase 100.0 2.4E-37 8.1E-42 365.8 15.3 248 588-856 376-630 (635)
200 3oz6_A Mitogen-activated prote 100.0 5.5E-37 1.9E-41 343.4 17.5 261 582-851 10-329 (388)
201 3sv0_A Casein kinase I-like; t 100.0 1.3E-36 4.5E-41 347.0 20.5 261 582-859 8-280 (483)
202 3i6u_A CDS1, serine/threonine- 100.0 8.2E-37 2.8E-41 344.8 18.4 254 578-851 132-400 (419)
203 3bhy_A Death-associated protei 100.0 1.4E-36 4.8E-41 324.7 19.2 255 582-856 6-273 (283)
204 3mwu_A Calmodulin-domain prote 100.0 3.9E-36 1.3E-40 346.6 24.0 256 575-851 16-277 (486)
205 3mi9_A Cell division protein k 100.0 4.8E-36 1.6E-40 331.2 23.7 265 580-851 16-312 (351)
206 2acx_A G protein-coupled recep 100.0 1.4E-36 4.9E-41 350.3 20.3 250 583-851 186-445 (576)
207 3g2f_A Bone morphogenetic prot 100.0 3.2E-37 1.1E-41 338.5 14.0 269 585-863 17-324 (336)
208 2qr7_A Ribosomal protein S6 ki 100.0 7.1E-37 2.4E-41 335.4 16.6 251 580-851 21-278 (342)
209 1ua2_A CAK, cell division prot 100.0 9.5E-37 3.2E-41 335.9 17.4 263 582-852 11-293 (346)
210 2w5a_A Serine/threonine-protei 100.0 2.9E-37 1E-41 329.2 12.9 254 583-857 8-274 (279)
211 3eqc_A Dual specificity mitoge 100.0 2E-36 6.7E-41 335.5 19.9 267 578-851 29-325 (360)
212 2j7t_A Serine/threonine-protei 100.0 9.5E-37 3.3E-41 329.3 16.7 250 582-850 20-275 (302)
213 2h6d_A 5'-AMP-activated protei 100.0 8.6E-37 3E-41 325.1 16.0 245 584-851 13-262 (276)
214 2r3i_A Cell division protein k 100.0 3.7E-36 1.3E-40 324.1 21.2 260 583-850 5-283 (299)
215 2clq_A Mitogen-activated prote 100.0 1.6E-36 5.3E-41 326.4 17.9 244 588-850 29-278 (295)
216 3lm5_A Serine/threonine-protei 100.0 2E-36 7E-41 330.5 18.9 262 572-851 18-288 (327)
217 2a19_B Interferon-induced, dou 100.0 1.2E-36 4.2E-41 325.2 16.8 250 581-861 11-278 (284)
218 2vgo_A Serine/threonine-protei 100.0 9.1E-37 3.1E-41 326.4 15.4 243 583-850 16-262 (284)
219 3com_A Serine/threonine-protei 100.0 3.2E-36 1.1E-40 327.1 19.9 248 582-850 30-278 (314)
220 1t4h_A Serine/threonine-protei 100.0 2.7E-36 9.1E-41 323.8 18.9 245 584-850 28-282 (290)
221 3lij_A Calcium/calmodulin depe 100.0 5.5E-36 1.9E-40 345.9 22.9 253 578-851 34-292 (494)
222 3rp9_A Mitogen-activated prote 100.0 2E-36 6.7E-41 346.6 19.0 264 582-851 54-397 (458)
223 3a7i_A MST3 kinase, serine/thr 100.0 1.7E-36 5.6E-41 327.6 17.1 247 583-852 24-272 (303)
224 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.6E-36 5.3E-41 331.7 16.8 260 582-850 35-318 (329)
225 4aaa_A Cyclin-dependent kinase 100.0 2E-36 6.9E-41 331.3 17.7 261 583-851 27-307 (331)
226 1vzo_A Ribosomal protein S6 ki 100.0 1.4E-36 4.9E-41 335.4 16.6 253 582-852 55-323 (355)
227 1cm8_A Phosphorylated MAP kina 100.0 3.5E-36 1.2E-40 333.6 19.5 261 582-855 26-314 (367)
228 2y7j_A Phosphorylase B kinase 100.0 3.5E-36 1.2E-40 333.6 19.3 249 582-850 95-359 (365)
229 3nsz_A CK II alpha, casein kin 100.0 3.9E-36 1.3E-40 328.9 19.5 255 582-850 37-319 (330)
230 1u46_A ACK-1, activated CDC42 100.0 3E-37 1E-41 331.3 10.2 260 583-861 20-288 (291)
231 2rku_A Serine/threonine-protei 100.0 1.1E-36 3.9E-41 327.4 14.6 247 582-851 16-266 (294)
232 3n9x_A Phosphotransferase; mal 100.0 2.6E-36 8.9E-41 342.4 18.0 198 582-785 27-253 (432)
233 3pg1_A Mitogen-activated prote 100.0 3.9E-36 1.3E-40 333.4 19.1 261 582-851 23-317 (362)
234 3o6n_A APL1; leucine-rich repe 100.0 6.8E-36 2.3E-40 334.9 21.2 312 155-507 43-355 (390)
235 3c4z_A Rhodopsin kinase; Ser/T 100.0 6.9E-36 2.4E-40 344.1 21.7 250 583-850 187-448 (543)
236 3ll6_A Cyclin G-associated kin 100.0 1.7E-36 5.9E-41 332.6 15.9 253 585-859 31-310 (337)
237 3q5i_A Protein kinase; CDPK, m 100.0 3.5E-36 1.2E-40 348.5 19.1 253 578-851 33-302 (504)
238 3nyv_A Calmodulin-domain prote 100.0 5.7E-36 2E-40 345.3 20.7 249 582-851 27-282 (484)
239 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.8E-36 9.7E-41 328.3 17.0 259 584-862 35-307 (319)
240 3byv_A Rhoptry kinase; malaria 100.0 3.1E-37 1.1E-41 344.0 9.4 237 583-850 75-359 (377)
241 2pml_X PFPK7, Ser/Thr protein 100.0 1.1E-36 3.9E-41 335.8 13.8 264 578-850 27-322 (348)
242 1x8b_A WEE1HU, WEE1-like prote 100.0 1.6E-36 5.4E-41 325.0 14.4 242 582-851 12-280 (289)
243 2xrw_A Mitogen-activated prote 100.0 4.1E-36 1.4E-40 334.0 17.9 258 582-851 26-319 (371)
244 2owb_A Serine/threonine-protei 100.0 1.4E-36 4.7E-41 333.1 13.8 246 583-851 43-292 (335)
245 3rgf_A Cyclin-dependent kinase 100.0 8.5E-36 2.9E-40 335.7 20.6 259 587-851 26-334 (405)
246 2ycf_A Serine/threonine-protei 100.0 4.2E-36 1.4E-40 327.4 17.1 253 578-850 7-274 (322)
247 3kvw_A DYRK2, dual specificity 100.0 6.1E-36 2.1E-40 338.6 18.8 197 582-789 98-304 (429)
248 2vwi_A Serine/threonine-protei 100.0 1E-36 3.5E-41 329.2 11.3 256 585-851 19-288 (303)
249 2wtk_C Serine/threonine-protei 100.0 4.7E-36 1.6E-40 324.4 16.4 248 583-851 7-264 (305)
250 4fmz_A Internalin; leucine ric 100.0 4.2E-35 1.4E-39 323.1 24.3 306 95-459 40-346 (347)
251 3fme_A Dual specificity mitoge 100.0 5E-36 1.7E-40 321.6 15.3 248 583-850 9-266 (290)
252 2fst_X Mitogen-activated prote 100.0 4E-36 1.4E-40 332.9 14.8 256 582-851 30-312 (367)
253 3q60_A ROP5B; pseudokinase, tr 100.0 9.4E-37 3.2E-41 339.3 9.5 251 583-850 64-352 (371)
254 3eb0_A Putative uncharacterize 100.0 9.2E-36 3.2E-40 332.8 17.5 255 583-850 9-321 (383)
255 1phk_A Phosphorylase kinase; g 100.0 2.5E-35 8.5E-40 317.5 20.0 253 578-850 14-283 (298)
256 3an0_A Dual specificity mitoge 100.0 6.9E-36 2.4E-40 328.4 15.9 248 583-850 53-310 (340)
257 3qyz_A Mitogen-activated prote 100.0 1.3E-35 4.6E-40 329.2 18.3 262 582-851 28-314 (364)
258 3oja_B Anopheles plasmodium-re 100.0 1.8E-35 6E-40 350.0 20.4 306 138-507 56-361 (597)
259 1blx_A Cyclin-dependent kinase 100.0 2.7E-35 9.2E-40 321.6 20.4 268 583-859 13-307 (326)
260 1zy4_A Serine/threonine-protei 100.0 1.4E-35 4.7E-40 320.1 17.9 251 582-851 7-284 (303)
261 3pfq_A PKC-B, PKC-beta, protei 100.0 6.9E-36 2.4E-40 355.8 16.7 246 582-850 342-597 (674)
262 3cek_A Dual specificity protei 100.0 1.5E-35 5.1E-40 321.7 17.8 250 583-852 30-294 (313)
263 1z57_A Dual specificity protei 100.0 2.3E-35 7.8E-40 323.8 19.5 264 576-851 8-329 (339)
264 2j0j_A Focal adhesion kinase 1 100.0 2.7E-36 9.2E-41 358.1 12.6 255 584-858 392-652 (656)
265 3e3p_A Protein kinase, putativ 100.0 2.6E-35 9E-40 326.5 19.6 265 582-856 24-322 (360)
266 2x7f_A TRAF2 and NCK-interacti 100.0 1.2E-35 4.2E-40 324.3 16.7 247 583-850 26-286 (326)
267 4fmz_A Internalin; leucine ric 100.0 1.1E-34 3.7E-39 319.8 24.2 302 76-435 45-346 (347)
268 4exu_A Mitogen-activated prote 100.0 2.7E-35 9.4E-40 327.3 19.6 256 582-851 43-324 (371)
269 1wak_A Serine/threonine-protei 100.0 1.3E-35 4.3E-40 333.6 16.7 268 574-850 29-391 (397)
270 2i6l_A Mitogen-activated prote 100.0 1.2E-35 4.3E-40 323.2 16.0 261 582-850 12-305 (320)
271 4e7w_A Glycogen synthase kinas 100.0 1.5E-35 5.3E-40 331.8 16.9 261 583-855 42-328 (394)
272 1j1b_A Glycogen synthase kinas 100.0 1.7E-35 5.7E-40 334.3 17.1 256 583-851 56-337 (420)
273 2wei_A Calmodulin-domain prote 100.0 7.7E-35 2.6E-39 311.9 21.2 253 577-850 18-276 (287)
274 2vx3_A Dual specificity tyrosi 100.0 9.2E-35 3.2E-39 324.5 22.1 205 577-789 49-263 (382)
275 1ogq_A PGIP-2, polygalacturona 100.0 2.6E-35 9E-40 319.2 17.1 259 230-513 50-312 (313)
276 2b9h_A MAP kinase FUS3, mitoge 100.0 2.7E-35 9.1E-40 325.5 16.2 261 582-851 12-306 (353)
277 2rio_A Serine/threonine-protei 100.0 3.1E-35 1E-39 333.6 17.0 251 582-850 15-295 (434)
278 3fhr_A MAP kinase-activated pr 100.0 2E-35 6.7E-40 323.8 14.8 253 578-850 25-287 (336)
279 3p23_A Serine/threonine-protei 100.0 2.8E-35 9.7E-40 332.8 15.1 247 583-850 26-283 (432)
280 2eu9_A Dual specificity protei 100.0 9.7E-35 3.3E-39 321.1 18.7 265 574-850 11-333 (355)
281 3coi_A Mitogen-activated prote 100.0 7.1E-35 2.4E-39 322.0 16.7 255 582-851 25-306 (353)
282 2dyl_A Dual specificity mitoge 100.0 1.1E-34 3.6E-39 315.7 16.8 249 582-850 26-283 (318)
283 2ft3_A Biglycan; proteoglycan, 100.0 1.7E-33 6E-38 308.0 25.9 286 158-457 34-331 (332)
284 1xku_A Decorin; proteoglycan, 100.0 2.7E-33 9.3E-38 306.3 26.6 287 158-457 32-330 (330)
285 3a99_A Proto-oncogene serine/t 100.0 4.2E-35 1.4E-39 319.1 12.0 239 582-851 44-294 (320)
286 4fcg_A Uncharacterized protein 100.0 1.4E-34 4.8E-39 315.4 14.5 289 25-364 23-314 (328)
287 2ft3_A Biglycan; proteoglycan, 100.0 2.2E-33 7.4E-38 307.3 23.9 287 100-433 34-331 (332)
288 3aln_A Dual specificity mitoge 100.0 8E-35 2.7E-39 318.1 12.2 251 584-851 25-286 (327)
289 2iwi_A Serine/threonine-protei 100.0 4.3E-35 1.5E-39 317.9 9.5 241 580-851 30-284 (312)
290 1q8y_A SR protein kinase; tran 100.0 1.9E-34 6.6E-39 321.1 14.9 259 583-851 21-334 (373)
291 3uqc_A Probable conserved tran 100.0 1E-33 3.4E-38 302.5 18.5 244 572-860 20-268 (286)
292 3qa8_A MGC80376 protein; kinas 100.0 8.9E-35 3.1E-39 338.4 9.4 267 582-859 15-311 (676)
293 1xku_A Decorin; proteoglycan, 100.0 1.9E-32 6.5E-37 299.5 27.1 291 99-433 31-330 (330)
294 3m2w_A MAP kinase-activated pr 100.0 2.9E-33 9.8E-38 301.6 17.7 239 572-851 8-257 (299)
295 2pzi_A Probable serine/threoni 100.0 1.4E-33 4.8E-38 338.3 13.3 246 575-856 73-327 (681)
296 3dzo_A Rhoptry kinase domain; 100.0 3.4E-33 1.2E-37 314.7 10.8 233 587-850 84-363 (413)
297 2vuw_A Serine/threonine-protei 100.0 6E-33 2E-37 304.4 11.9 239 583-849 22-329 (336)
298 1z7x_W Ribonuclease inhibitor; 100.0 1.9E-35 6.6E-40 339.1 -14.5 349 76-435 4-411 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 7.6E-36 2.6E-40 342.4 -18.0 355 99-460 3-412 (461)
300 2z80_A TOLL-like receptor 2, v 100.0 2.4E-31 8.1E-36 293.7 15.7 175 139-316 58-235 (353)
301 2z66_A Variable lymphocyte rec 100.0 2.4E-31 8.1E-36 287.6 14.5 286 58-373 5-296 (306)
302 2z80_A TOLL-like receptor 2, v 100.0 1.1E-30 3.8E-35 288.3 15.5 282 155-463 29-318 (353)
303 2z66_A Variable lymphocyte rec 100.0 1.1E-30 3.8E-35 282.3 14.3 164 325-488 124-293 (306)
304 3zyi_A Leucine-rich repeat-con 100.0 2.7E-29 9.4E-34 286.8 22.6 244 232-481 56-302 (452)
305 1ozn_A Reticulon 4 receptor; N 100.0 1.2E-29 4.1E-34 271.2 16.3 254 184-442 14-268 (285)
306 1ozn_A Reticulon 4 receptor; N 100.0 2.4E-29 8.3E-34 268.8 17.9 252 233-488 14-267 (285)
307 3oja_A Leucine-rich immune mol 100.0 6.7E-31 2.3E-35 301.9 5.0 233 207-477 35-270 (487)
308 1wwl_A Monocyte differentiatio 100.0 1.9E-30 6.5E-35 281.1 7.9 260 152-460 38-310 (312)
309 3zyj_A Leucine-rich repeat-con 100.0 2E-28 6.7E-33 278.7 23.9 248 182-459 44-292 (440)
310 3o53_A Protein LRIM1, AGAP0063 100.0 6.4E-31 2.2E-35 285.5 3.0 279 125-442 2-283 (317)
311 4fcg_A Uncharacterized protein 100.0 1.1E-28 3.8E-33 268.8 20.5 224 158-387 82-313 (328)
312 3g06_A SSPH2 (leucine-rich rep 100.0 2.7E-28 9.2E-33 285.8 25.0 265 136-469 43-307 (622)
313 3ogk_B Coronatine-insensitive 100.0 2.7E-32 9.3E-37 323.3 -10.3 325 155-483 162-527 (592)
314 3zyj_A Leucine-rich repeat-con 100.0 2.5E-28 8.7E-33 277.8 22.8 247 158-412 44-292 (440)
315 3zyi_A Leucine-rich repeat-con 100.0 2.4E-28 8.1E-33 279.0 22.2 89 371-459 214-303 (452)
316 1wwl_A Monocyte differentiatio 100.0 3.3E-30 1.1E-34 279.2 6.1 201 277-483 93-310 (312)
317 3g06_A SSPH2 (leucine-rich rep 100.0 5.7E-28 2E-32 283.0 23.8 297 48-446 12-308 (622)
318 3o53_A Protein LRIM1, AGAP0063 100.0 5.1E-30 1.8E-34 278.3 5.1 265 182-486 11-280 (317)
319 3oja_A Leucine-rich immune mol 99.9 1.4E-28 4.8E-33 282.6 7.5 251 141-430 18-270 (487)
320 3ogk_B Coronatine-insensitive 99.9 4.1E-30 1.4E-34 304.6 -8.2 361 97-461 110-528 (592)
321 4azs_A Methyltransferase WBDD; 99.9 3.2E-28 1.1E-32 283.5 7.7 183 591-783 243-437 (569)
322 2o6q_A Variable lymphocyte rec 99.9 1.2E-26 4.1E-31 245.7 19.2 218 57-318 2-220 (270)
323 2z62_A TOLL-like receptor 4, v 99.9 1.4E-26 4.7E-31 246.2 17.9 226 234-463 11-241 (276)
324 2z62_A TOLL-like receptor 4, v 99.9 1.5E-25 5.1E-30 238.2 19.7 221 186-436 12-238 (276)
325 2o6q_A Variable lymphocyte rec 99.9 1.2E-24 4.2E-29 230.2 21.6 177 183-364 18-194 (270)
326 3rfs_A Internalin B, repeat mo 99.9 2.4E-25 8.2E-30 235.9 14.5 207 155-374 39-245 (272)
327 3rfs_A Internalin B, repeat mo 99.9 1.9E-25 6.4E-30 236.7 13.7 228 156-398 18-245 (272)
328 1p9a_G Platelet glycoprotein I 99.9 2.1E-24 7E-29 230.6 19.8 203 226-460 6-209 (290)
329 1p9a_G Platelet glycoprotein I 99.9 1.8E-24 6E-29 231.1 19.2 202 177-387 6-207 (290)
330 2xwt_C Thyrotropin receptor; s 99.9 2E-24 7E-29 224.1 15.5 198 99-313 31-236 (239)
331 3goz_A Leucine-rich repeat-con 99.9 1.3E-25 4.3E-30 248.5 2.3 250 213-463 5-301 (362)
332 4glp_A Monocyte differentiatio 99.9 3.9E-24 1.3E-28 231.3 13.3 209 206-460 91-308 (310)
333 2xwt_C Thyrotropin receptor; s 99.9 1.4E-23 4.8E-28 217.8 16.6 84 208-292 33-118 (239)
334 4glp_A Monocyte differentiatio 99.9 3.7E-24 1.3E-28 231.4 12.6 203 255-482 91-307 (310)
335 2p1m_B Transport inhibitor res 99.9 7.4E-27 2.5E-31 276.7 -11.1 129 96-237 102-242 (594)
336 3m19_A Variable lymphocyte rec 99.9 4.1E-23 1.4E-27 215.9 18.6 158 304-461 36-194 (251)
337 3goz_A Leucine-rich repeat-con 99.9 3.6E-25 1.2E-29 244.9 0.8 79 104-192 3-91 (362)
338 3m19_A Variable lymphocyte rec 99.9 5.7E-23 2E-27 214.8 17.4 181 230-414 14-194 (251)
339 2ast_B S-phase kinase-associat 99.9 1.1E-25 3.7E-30 246.6 -3.7 268 58-373 35-315 (336)
340 1h6u_A Internalin H; cell adhe 99.9 2.9E-23 9.8E-28 223.9 14.7 207 212-460 25-231 (308)
341 2ca6_A RAN GTPase-activating p 99.9 1.2E-25 4E-30 251.2 -4.3 247 149-415 24-319 (386)
342 2p1m_B Transport inhibitor res 99.9 3.3E-27 1.1E-31 279.6 -18.7 369 76-460 106-520 (594)
343 4ay9_X Follicle-stimulating ho 99.9 1.7E-22 5.7E-27 222.3 20.1 200 184-388 12-215 (350)
344 3en9_A Glycoprotease, O-sialog 99.9 5E-24 1.7E-28 246.7 8.1 181 589-784 343-538 (540)
345 1h6u_A Internalin H; cell adhe 99.9 5.5E-23 1.9E-27 221.7 13.8 189 158-364 20-208 (308)
346 2ca6_A RAN GTPase-activating p 99.9 2.3E-25 7.9E-30 248.8 -6.5 227 226-463 56-320 (386)
347 4ay9_X Follicle-stimulating ho 99.9 5.4E-22 1.8E-26 218.2 20.4 238 209-456 12-256 (350)
348 2ast_B S-phase kinase-associat 99.9 1.7E-24 6E-29 236.9 -0.5 235 157-397 70-315 (336)
349 3cvr_A Invasion plasmid antige 99.9 2.7E-22 9.3E-27 232.0 10.2 215 48-326 33-253 (571)
350 2o6s_A Variable lymphocyte rec 99.9 3.4E-21 1.2E-25 195.2 15.6 180 185-376 11-190 (208)
351 2o6s_A Variable lymphocyte rec 99.9 3E-21 1E-25 195.6 14.8 181 233-447 10-190 (208)
352 3cvr_A Invasion plasmid antige 99.9 3.8E-21 1.3E-25 222.5 16.1 168 157-351 80-254 (571)
353 4b8c_D Glucose-repressible alc 99.8 5.4E-22 1.9E-26 238.1 3.9 238 27-313 130-369 (727)
354 3e6j_A Variable lymphocyte rec 99.8 3.3E-20 1.1E-24 190.8 16.6 160 57-246 16-175 (229)
355 1h6t_A Internalin B; cell adhe 99.8 1.4E-20 4.9E-25 200.9 10.4 189 158-364 25-213 (291)
356 1m9s_A Internalin B; cell inva 99.8 3.1E-20 1E-24 217.4 13.1 172 153-340 39-210 (605)
357 1zar_A RIO2 kinase; serine kin 99.8 1E-20 3.5E-25 200.6 7.2 127 588-730 96-240 (282)
358 1m9s_A Internalin B; cell inva 99.8 8.8E-20 3E-24 213.5 15.7 200 98-325 20-219 (605)
359 1h6t_A Internalin B; cell adhe 99.8 2.7E-20 9.3E-25 198.8 8.8 170 254-460 45-214 (291)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 2.9E-19 9.8E-24 182.4 14.8 154 233-414 14-168 (220)
361 2v9t_B SLIT homolog 2 protein 99.8 2.9E-19 9.9E-24 182.4 14.8 150 233-386 14-163 (220)
362 2xot_A Amphoterin-induced prot 99.8 7.1E-20 2.4E-24 202.1 11.0 178 233-435 21-202 (361)
363 2xot_A Amphoterin-induced prot 99.8 1.3E-19 4.4E-24 200.0 12.9 175 185-364 22-202 (361)
364 2v9t_B SLIT homolog 2 protein 99.8 4.6E-19 1.6E-23 180.9 15.7 151 307-460 15-166 (220)
365 1xeu_A Internalin C; cellular 99.8 4.9E-20 1.7E-24 193.6 8.1 171 155-342 17-187 (263)
366 2v70_A SLIT-2, SLIT homolog 2 99.8 6.7E-19 2.3E-23 179.7 14.8 114 226-340 53-166 (220)
367 1dce_A Protein (RAB geranylger 99.8 1.3E-21 4.4E-26 227.7 -6.7 106 232-343 443-549 (567)
368 3e6j_A Variable lymphocyte rec 99.8 1.5E-18 5.2E-23 178.3 17.0 156 305-463 21-176 (229)
369 1dce_A Protein (RAB geranylger 99.8 1.7E-21 5.9E-26 226.6 -6.8 203 227-463 346-550 (567)
370 3sb4_A Hypothetical leucine ri 99.8 8.5E-20 2.9E-24 198.9 6.9 218 229-453 100-328 (329)
371 1xeu_A Internalin C; cellular 99.8 1.6E-19 5.5E-24 189.7 8.2 171 97-294 17-187 (263)
372 3sb4_A Hypothetical leucine ri 99.8 1.2E-19 4.2E-24 197.5 5.1 292 89-405 13-327 (329)
373 4b8c_D Glucose-repressible alc 99.8 1.6E-19 5.4E-24 216.8 5.2 196 157-385 173-369 (727)
374 1w8a_A SLIT protein; signaling 99.7 4.1E-18 1.4E-22 169.9 12.6 179 330-513 11-192 (192)
375 4ezg_A Putative uncharacterize 99.7 3.9E-18 1.3E-22 170.9 10.6 153 276-459 41-194 (197)
376 4ezg_A Putative uncharacterize 99.7 1.1E-17 3.7E-22 167.7 11.9 152 252-411 41-193 (197)
377 4fdw_A Leucine rich hypothetic 99.7 1.7E-16 5.9E-21 176.5 20.8 240 207-481 136-382 (401)
378 1w8a_A SLIT protein; signaling 99.7 3.5E-17 1.2E-21 163.2 11.2 112 304-415 30-142 (192)
379 4fdw_A Leucine rich hypothetic 99.7 4.1E-16 1.4E-20 173.4 20.0 270 99-412 113-383 (401)
380 1zth_A RIO1 serine protein kin 99.7 1.2E-17 4E-22 174.9 5.2 135 585-732 50-219 (258)
381 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.7E-21 155.9 9.3 136 98-248 23-164 (168)
382 2ell_A Acidic leucine-rich nuc 99.7 1.3E-16 4.4E-21 155.4 9.0 131 327-459 24-160 (168)
383 2wfh_A SLIT homolog 2 protein 99.6 8.5E-16 2.9E-20 153.0 12.7 127 233-364 13-139 (193)
384 2o6r_A Variable lymphocyte rec 99.6 1.6E-15 5.3E-20 149.1 12.1 131 232-366 9-139 (177)
385 2wfh_A SLIT homolog 2 protein 99.6 1.8E-15 6.3E-20 150.6 12.6 123 138-267 15-138 (193)
386 2o6r_A Variable lymphocyte rec 99.6 2.4E-15 8.3E-20 147.7 12.9 128 184-316 10-137 (177)
387 2je0_A Acidic leucine-rich nuc 99.6 4.6E-16 1.6E-20 148.2 7.1 127 98-238 16-148 (149)
388 2je0_A Acidic leucine-rich nuc 99.6 3.6E-16 1.2E-20 148.9 5.9 124 329-454 19-148 (149)
389 4fs7_A Uncharacterized protein 99.6 2E-14 6.8E-19 160.4 20.7 309 94-455 66-375 (394)
390 4fs7_A Uncharacterized protein 99.6 3.7E-14 1.3E-18 158.2 18.1 316 111-479 59-376 (394)
391 1ds9_A Outer arm dynein; leuci 99.5 1.1E-16 3.9E-21 160.4 -4.2 131 157-294 18-155 (198)
392 1a9n_A U2A', U2A'; complex (nu 99.5 7.5E-15 2.6E-19 144.0 8.5 82 207-292 43-126 (176)
393 1a9n_A U2A', U2A'; complex (nu 99.5 8.1E-15 2.8E-19 143.8 8.2 134 226-364 15-153 (176)
394 1ds9_A Outer arm dynein; leuci 99.5 3.2E-16 1.1E-20 157.1 -2.5 152 205-364 17-185 (198)
395 4gyi_A RIO2 kinase; protein ki 99.5 5.4E-15 1.9E-19 160.3 6.8 138 584-733 97-266 (397)
396 3g39_A Variable lymphocyte rec 99.5 1.5E-13 5.1E-18 133.7 12.3 107 353-462 11-118 (170)
397 3g39_A Variable lymphocyte rec 99.5 2E-13 6.8E-18 132.8 11.1 106 232-341 11-116 (170)
398 2r9u_A Variable lymphocyte rec 99.4 3.5E-13 1.2E-17 131.5 12.4 104 354-460 15-119 (174)
399 2r9u_A Variable lymphocyte rec 99.4 3.9E-13 1.3E-17 131.2 11.4 104 184-292 15-118 (174)
400 4gt6_A Cell surface protein; l 99.4 6.9E-12 2.4E-16 139.8 19.5 115 340-458 254-369 (394)
401 4gt6_A Cell surface protein; l 99.4 2.9E-11 9.8E-16 134.8 23.2 330 94-458 58-390 (394)
402 2ifg_A High affinity nerve gro 99.3 1.9E-12 6.6E-17 141.7 8.2 107 60-193 8-115 (347)
403 3un9_A NLR family member X1; l 99.3 2.1E-14 7.2E-19 158.0 -8.2 135 230-364 101-252 (372)
404 3un9_A NLR family member X1; l 99.3 3.5E-14 1.2E-18 156.3 -9.4 87 157-243 72-168 (372)
405 2ifg_A High affinity nerve gro 99.2 1.7E-11 5.7E-16 134.2 10.4 129 309-440 14-146 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 4.4E-11 1.5E-15 125.2 11.1 138 586-730 18-212 (263)
407 4h09_A Hypothetical leucine ri 99.2 9.4E-10 3.2E-14 121.8 21.0 313 95-469 42-355 (379)
408 1nd4_A Aminoglycoside 3'-phosp 99.1 1.2E-10 4.3E-15 121.5 10.6 133 586-730 24-213 (264)
409 4h09_A Hypothetical leucine ri 99.1 2.2E-09 7.6E-14 118.7 21.2 152 323-479 190-343 (379)
410 2ra8_A Uncharacterized protein 98.9 2.4E-10 8.3E-15 124.5 1.8 162 175-362 166-341 (362)
411 2ra8_A Uncharacterized protein 98.9 1.2E-10 4E-15 127.0 -1.4 191 92-314 132-341 (362)
412 3dxp_A Putative acyl-COA dehyd 98.8 5.7E-09 2E-13 114.5 10.4 140 587-731 44-248 (359)
413 3rw6_A Nuclear RNA export fact 98.8 4.8E-11 1.7E-15 123.3 -6.0 58 202-261 192-257 (267)
414 3sg8_A APH(2'')-ID; antibiotic 98.7 5E-09 1.7E-13 112.1 2.0 183 591-784 29-287 (304)
415 4gkh_A Aminoglycoside 3'-phosp 98.4 8.7E-07 3E-11 92.7 10.2 131 592-730 35-222 (272)
416 3r70_A Aminoglycoside phosphot 98.3 1.1E-06 3.9E-11 94.3 9.0 131 587-731 43-237 (320)
417 3rw6_A Nuclear RNA export fact 98.3 6.2E-08 2.1E-12 100.0 -1.7 39 254-292 169-209 (267)
418 3d1u_A Putative fructosamine-3 98.2 3.9E-06 1.3E-10 88.4 11.6 74 587-665 21-97 (288)
419 1io0_A Tropomodulin; LRR prote 98.2 4.8E-08 1.6E-12 95.9 -2.9 122 87-243 24-164 (185)
420 3tdw_A Gentamicin resistance p 98.2 6.1E-06 2.1E-10 87.9 11.6 132 591-731 28-224 (306)
421 1io0_A Tropomodulin; LRR prote 98.2 1.3E-07 4.4E-12 92.8 -1.8 69 223-292 29-106 (185)
422 3ats_A Putative uncharacterize 98.1 2.7E-06 9.3E-11 92.9 7.9 76 591-666 30-121 (357)
423 3ovc_A Hygromycin-B 4-O-kinase 98.0 8.2E-06 2.8E-10 89.0 8.5 70 591-666 50-122 (362)
424 2q83_A YTAA protein; 2635576, 97.9 3.8E-05 1.3E-09 83.1 11.9 134 591-729 41-250 (346)
425 2olc_A MTR kinase, methylthior 97.8 9.5E-05 3.2E-09 81.8 11.6 73 588-663 37-120 (397)
426 3jr1_A Putative fructosamine-3 97.8 0.00014 4.9E-09 77.0 12.3 132 591-727 45-232 (312)
427 3e4g_A ATP synthase subunit S, 97.5 2E-05 6.7E-10 75.3 1.4 84 158-241 62-150 (176)
428 3f7w_A Putative fructosamine-3 97.5 0.00059 2E-08 71.7 12.8 75 586-665 20-97 (288)
429 3e4g_A ATP synthase subunit S, 97.4 3.8E-05 1.3E-09 73.3 1.9 33 208-240 63-95 (176)
430 2pyw_A Uncharacterized protein 97.2 0.0011 3.7E-08 73.8 11.2 78 701-780 232-312 (420)
431 3csv_A Aminoglycoside phosphot 97.2 0.0014 4.9E-08 70.3 11.4 140 587-731 24-217 (333)
432 3feg_A Choline/ethanolamine ki 97.0 0.0016 5.6E-08 70.8 9.5 136 590-730 58-253 (379)
433 1nw1_A Choline kinase (49.2 KD 97.0 0.0014 4.7E-08 73.1 8.6 69 591-665 82-159 (429)
434 1zyl_A Hypothetical protein YI 96.9 0.01 3.5E-07 63.3 15.0 135 593-730 36-222 (328)
435 3rfe_A Platelet glycoprotein I 96.9 0.0011 3.9E-08 60.1 6.0 55 403-459 12-68 (130)
436 2ppq_A HSK, HK, homoserine kin 96.9 0.0024 8.3E-08 68.1 9.5 137 591-730 31-216 (322)
437 3dxq_A Choline/ethanolamine ki 96.8 0.0025 8.4E-08 67.4 8.9 67 591-665 27-95 (301)
438 3i1a_A Spectinomycin phosphotr 96.8 0.0068 2.3E-07 65.1 12.5 67 592-665 33-108 (339)
439 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00024 8E-09 69.2 0.1 65 227-292 38-111 (197)
440 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00013 4.5E-09 71.0 -2.7 92 90-191 32-136 (197)
441 3rfe_A Platelet glycoprotein I 96.6 0.0027 9.1E-08 57.7 6.2 55 234-291 12-67 (130)
442 2qg7_A Ethanolamine kinase PV0 96.5 0.0091 3.1E-07 66.7 10.7 70 591-665 117-188 (458)
443 2yle_A Protein spire homolog 1 96.4 0.025 8.6E-07 55.2 11.6 103 663-783 33-135 (229)
444 3c5i_A Choline kinase; choline 96.2 0.0074 2.5E-07 65.7 7.9 69 592-665 43-121 (369)
445 3f2s_A CK, chetk-alpha, cholin 96.0 0.022 7.4E-07 62.2 10.0 136 591-730 61-279 (401)
446 3mes_A Choline kinase; malaria 95.8 0.012 4.1E-07 64.9 7.0 70 591-665 79-157 (424)
447 3g15_A CK, chetk-alpha, cholin 90.9 0.2 6.9E-06 54.9 5.4 30 702-731 245-280 (401)
448 4ano_A ESSB; membrane protein, 80.8 4.2 0.00014 39.7 8.0 82 636-729 48-131 (219)
449 4ann_A ESSB; membrane protein, 79.3 3.1 0.00011 40.4 6.4 114 636-784 43-157 (215)
450 2ks1_B Epidermal growth factor 50.9 4.7 0.00016 28.1 0.8 14 542-555 26-39 (44)
451 2lz0_A Uncharacterized protein 48.7 36 0.0012 28.4 6.3 44 267-311 8-51 (100)
452 2jwa_A Receptor tyrosine-prote 48.3 4.3 0.00015 28.2 0.3 7 548-554 32-38 (44)
453 3cxl_A N-chimerin; SH2, RHO-GA 48.2 2.7 9.2E-05 46.7 -1.2 55 595-649 152-215 (463)
454 2l2t_A Receptor tyrosine-prote 45.0 5.6 0.00019 27.7 0.5 8 547-554 30-37 (44)
455 2lz0_A Uncharacterized protein 44.5 44 0.0015 27.9 6.2 43 293-336 10-52 (100)
456 2k1k_A Ephrin type-A receptor 42.3 9.1 0.00031 25.7 1.2 9 533-541 16-24 (38)
457 3ls8_A Phosphatidylinositol 3- 33.9 3.2E+02 0.011 30.9 12.8 81 642-730 403-501 (614)
458 2x6h_A GH13170P, VPS34, phosph 32.6 2.9E+02 0.0098 31.9 12.3 45 679-730 529-575 (696)
459 2klu_A T-cell surface glycopro 24.4 14 0.00048 27.8 -0.3 14 536-549 16-29 (70)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.8e-67 Score=636.38 Aligned_cols=482 Identities=34% Similarity=0.545 Sum_probs=332.6
Q ss_pred CCChhHHHHHHHHHhhccCCCCCCCCCCCCCCCCCccccceEecCCCCCccEEEEeecCCCCCccc---cc---------
Q 002826 25 TSASTEKDTLLSFKASIDDSKNSLSTWSNTSNIHYCNWTGVTCVTTATASLTVASINLQSLNLSGE---IS--------- 92 (876)
Q Consensus 25 ~~~~~~~~all~~k~~~~~~~~~~~sW~~~~~~~~C~w~gv~c~~~~~~~~~~~~l~l~~~~l~~~---~~--------- 92 (876)
.++++|++||++||+++.||. .+++|+.+ .|||.|+||+|+. .+|+.++|.+.++.|. +|
T Consensus 8 ~~~~~~~~all~~k~~~~~~~-~l~~W~~~--~~~C~w~gv~C~~-----~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKN-LLPDWSSN--KNPCTFDGVTCRD-----DKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTT-SSTTCCTT--SCGGGSTTEEEET-----TEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred cCCHHHHHHHHHHHhhCCCcc-cccCCCCC--CCCcCCcceEECC-----CcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 446789999999999999988 89999743 5899999999982 2788888888888776 43
Q ss_pred --------------ccccCCCCCCeeecCCCccccccCc--cccCCCCCCcccCCCccc---------------------
Q 002826 93 --------------SSVCELSSLSNLNLADNLFNQPIPL--HLSQCSSLETLNLSNNLI--------------------- 135 (876)
Q Consensus 93 --------------~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l--------------------- 135 (876)
+.++.+++|++|+|++|.+++.+|. .|+++++|++|+|++|.+
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls 159 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECC
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECC
Confidence 4666777788888888887777666 666666666666665531
Q ss_pred -------------------------------------------ceeecCCccccccCCCccCCccccceecccccccCCC
Q 002826 136 -------------------------------------------WVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGS 172 (876)
Q Consensus 136 -------------------------------------------~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 172 (876)
++|+|++|++++.+|. ++++++|++|+|++|++++.
T Consensus 160 ~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~ 238 (768)
T 3rgz_A 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGD 238 (768)
T ss_dssp SSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSC
T ss_pred CCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCc
Confidence 2355555555555555 77777788888888888777
Q ss_pred cCccccCCCcceEEEccCCCCc---------------------CCCCCCccccc-CcccEEEecCCCCcccCCccccCCC
Q 002826 173 VPFVFGNFSELVVLDLSQNAYL---------------------ISEIPSDIGKL-EKLEQLFLQSSGFHGVIPDSFVGLQ 230 (876)
Q Consensus 173 ~p~~~~~l~~L~~L~Ls~N~~~---------------------~~~~p~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~ 230 (876)
+|..|+++++|++|+|++|++. .+.+|..+..+ ++|++|+|++|++++.+|..|.+++
T Consensus 239 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~ 318 (768)
T 3rgz_A 239 FSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 318 (768)
T ss_dssp HHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCT
T ss_pred ccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCC
Confidence 7777777777777777776532 11344444433 5555555555555555555444444
Q ss_pred CCcEEecccCcc-------------------------CCCCCCccccc--------------------------cccccE
Q 002826 231 SLSILDLSQNNL-------------------------TGEVPQSLGSS--------------------------LLKLVS 259 (876)
Q Consensus 231 ~L~~L~Ls~N~l-------------------------~~~ip~~~~~~--------------------------l~~L~~ 259 (876)
+|++|+|++|++ ++.+|..+... +++|++
T Consensus 319 ~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~ 398 (768)
T 3rgz_A 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 398 (768)
T ss_dssp TCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCE
T ss_pred CccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccE
Confidence 444444444444 33333322110 122333
Q ss_pred EEeccccccCcCCcccccCCccceeeeecccccccCCCCC------------------------ccccccceeecccccC
Q 002826 260 FDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSI------------------------NECLNLERFQVQDNGF 315 (876)
Q Consensus 260 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~------------------------~~l~~L~~L~L~~N~l 315 (876)
|++++|++++.+|..+.++++|++|+|++|++++.+|..| ..+++|++|++++|++
T Consensus 399 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 478 (768)
T 3rgz_A 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478 (768)
T ss_dssp EECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred EECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcc
Confidence 3333333333444445555555555555555555555444 4455555555555555
Q ss_pred CCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCC-
Q 002826 316 SGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPN- 394 (876)
Q Consensus 316 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~- 394 (876)
++.+|..+.++++|+.|++++|++++.+|.++..+++|++|+|++|++++.+|..++++++|+.|++++|+++|.+|..
T Consensus 479 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~ 558 (768)
T 3rgz_A 479 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGG
T ss_pred cCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHH
Confidence 5555555555556666666666666666666666666666666666666666666666666666666666666555543
Q ss_pred ---------------------------------------------------------------------cCCCCCccEEE
Q 002826 395 ---------------------------------------------------------------------FCDSPVMSIIN 405 (876)
Q Consensus 395 ---------------------------------------------------------------------~~~~~~L~~L~ 405 (876)
|..++.|++||
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~Ld 638 (768)
T 3rgz_A 559 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638 (768)
T ss_dssp GTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEE
T ss_pred hcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEE
Confidence 22345677888
Q ss_pred ccCCccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccc-ccceEEccCCcccc
Q 002826 406 LSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL-KLALFNVSFNKLSG 483 (876)
Q Consensus 406 Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~ls~N~l~~ 483 (876)
|++|+++|.+| +++.+++|+.|+|++|+++|.+|..|+.+++|+.|||++|+++|.+|..+..+ .++.||+|+|+++|
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 718 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEE
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccc
Confidence 88888888887 79999999999999999999999999999999999999999999999999998 59999999999999
Q ss_pred ccCCcc-cCCCCCccccCCCCCCCCCCCCCCCCC
Q 002826 484 RVPYSL-ISGLPASYLQGNPGLCGPGLSNSCDEN 516 (876)
Q Consensus 484 ~~p~~~-~~~~~~~~~~~N~~~C~~~~~~~c~~~ 516 (876)
.+|... +.+++...+.|||++||.|+. .|...
T Consensus 719 ~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 719 PIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp ECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred cCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 999764 888999999999999999987 89654
No 2
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.2e-56 Score=542.50 Aligned_cols=463 Identities=17% Similarity=0.229 Sum_probs=330.1
Q ss_pred ChhHHHHHHHHHhhccCCCCCCCCCCCCC---CCCC--ccc------------cceEecCCCCCccEEEEeecCCCCCcc
Q 002826 27 ASTEKDTLLSFKASIDDSKNSLSTWSNTS---NIHY--CNW------------TGVTCVTTATASLTVASINLQSLNLSG 89 (876)
Q Consensus 27 ~~~~~~all~~k~~~~~~~~~~~sW~~~~---~~~~--C~w------------~gv~c~~~~~~~~~~~~l~l~~~~l~~ 89 (876)
..+|++||++||+++.+| +|+... +.+| |.| .||+|+.. .+|+.++|.+++++|
T Consensus 267 ~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~----~~V~~L~Ls~~~L~G 337 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNN----GRVTGLSLAGFGAKG 337 (876)
T ss_dssp HHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTT----SCEEEEECTTTCCEE
T ss_pred chHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCC----CCEEEEECccCCCCC
Confidence 357999999999999887 786543 2344 999 99999873 289999999999999
Q ss_pred cccccccCCCCCCeeec-CCCccccc------------------------------------------------------
Q 002826 90 EISSSVCELSSLSNLNL-ADNLFNQP------------------------------------------------------ 114 (876)
Q Consensus 90 ~~~~~~~~l~~L~~L~L-~~n~l~~~------------------------------------------------------ 114 (876)
.+|+++++|++|++|+| ++|.++|.
T Consensus 338 ~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i 417 (876)
T 4ecn_A 338 RVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPI 417 (876)
T ss_dssp EECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCC
T ss_pred cCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccc
Confidence 99999999999999999 88876655
Q ss_pred ----------------------cCccccCCCCCCcccCCCcccce-------eecCCccccccCCCccC--Cccccceec
Q 002826 115 ----------------------IPLHLSQCSSLETLNLSNNLIWV-------LDLSRNHIEGKIPESIG--SLVNLQVLN 163 (876)
Q Consensus 115 ----------------------~p~~~~~l~~L~~L~Ls~N~l~~-------LdL~~n~l~~~~p~~~~--~l~~L~~L~ 163 (876)
+|..|+++++|++|+|++|.|+. +.++.|.++|.+|+.++ ++++|++|+
T Consensus 418 ~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~ 497 (876)
T 4ecn_A 418 KKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVE 497 (876)
T ss_dssp CCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred ccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEE
Confidence 55666666666666555544422 11222333335777776 788888888
Q ss_pred ccccccCCCcCccccCCCcceEEEccCCCCcCC-CCCCcccccC-------cccEEEecCCCCcccCCc--cccCCCCCc
Q 002826 164 LGSNLLSGSVPFVFGNFSELVVLDLSQNAYLIS-EIPSDIGKLE-------KLEQLFLQSSGFHGVIPD--SFVGLQSLS 233 (876)
Q Consensus 164 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~-~~p~~~~~l~-------~L~~L~L~~n~l~~~~~~--~~~~l~~L~ 233 (876)
|++|++.+.+|..|+++++|++|+|++|+++.+ .+|..++.++ +|++|+|++|+++ .+|. .|.++++|+
T Consensus 498 Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~ 576 (876)
T 4ecn_A 498 LYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLG 576 (876)
T ss_dssp EESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCC
T ss_pred CcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCC
Confidence 888887777787788888888888888763233 5676665555 7888888888877 5666 777788888
Q ss_pred EEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCc-cceeeeecccccccCCCCCccccc--cceeec
Q 002826 234 ILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANG-LVNLSLHKNFFNGSIPGSINECLN--LERFQV 310 (876)
Q Consensus 234 ~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~i~~~~~~~~~~l~~--L~~L~L 310 (876)
+|+|++|+++ .+| . +..+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|.|+ .+|..+..+.. |+.|++
T Consensus 577 ~L~Ls~N~l~-~lp-~-~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~L 651 (876)
T 4ecn_A 577 LLDCVHNKVR-HLE-A-FGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDF 651 (876)
T ss_dssp EEECTTSCCC-BCC-C-CCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEEC
T ss_pred EEECCCCCcc-cch-h-hcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEEC
Confidence 8888888877 777 3 345778888888888877 67777777777 888888888877 56666666644 788888
Q ss_pred ccccCCCCCCccc---C--CCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCcccc--------ccCc
Q 002826 311 QDNGFSGDFPDKL---W--SLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGS--------VKSL 377 (876)
Q Consensus 311 ~~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--------l~~L 377 (876)
++|++++.+|... . .+++|+.|++++|+++..++..+..+++|+.|+|++|+++ .+|..+.. +++|
T Consensus 652 s~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L 730 (876)
T 4ecn_A 652 SYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLL 730 (876)
T ss_dssp CSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGC
T ss_pred cCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCc
Confidence 8888877665332 1 3347788888888887544444557777888888888887 55544332 2377
Q ss_pred cEEeCCCccccCCCCCCcC--CCCCccEEEccCCccccCCcCcccccccceEeccC------CcCCCCCCcCCCCCCCcc
Q 002826 378 YRFSASQNSFYGSLPPNFC--DSPVMSIINLSQNSISGQIPELKKCRKLVSLSLAD------NSLTGEIPPSLAELPVLT 449 (876)
Q Consensus 378 ~~L~ls~N~l~~~~~~~~~--~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~ 449 (876)
+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++.+..+..+++|+.|+|++ |++.+.+|..|..+++|+
T Consensus 731 ~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~ 809 (876)
T 4ecn_A 731 TTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLI 809 (876)
T ss_dssp CEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCC
T ss_pred cEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCC
Confidence 88888888877 5666665 77788888888888877555777788888887765 667777787888888888
Q ss_pred eeeCCCCcccccCCCcccccccceEEccCCccccccCCcc--cCCCCCccccCCCCCC--CCC
Q 002826 450 YLDLSDNNLTGPIPQGLQNLKLALFNVSFNKLSGRVPYSL--ISGLPASYLQGNPGLC--GPG 508 (876)
Q Consensus 450 ~L~Ls~N~l~~~~p~~~~~l~l~~l~ls~N~l~~~~p~~~--~~~~~~~~~~~N~~~C--~~~ 508 (876)
.|+|++|+| +.+|..+.. .++.||+++|++....+... ........+.+|++.| ||+
T Consensus 810 ~L~Ls~N~L-~~Ip~~l~~-~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~I~gC~ 870 (876)
T 4ecn_A 810 QLQIGSNDI-RKVDEKLTP-QLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIRGCD 870 (876)
T ss_dssp EEECCSSCC-CBCCSCCCS-SSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSEEESCG
T ss_pred EEECCCCCC-CccCHhhcC-CCCEEECCCCCCCccChHHccccccchheeecCCCccccCCCC
Confidence 888888888 567776553 67778888887764443332 1123344566666544 554
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.6e-56 Score=531.36 Aligned_cols=460 Identities=16% Similarity=0.261 Sum_probs=316.8
Q ss_pred hhHHHHHHHHHhhccCCCCC--------CCCCCCCCCCCCccc---cceEecCCCCCccEEEEeecCCCCCccccccccc
Q 002826 28 STEKDTLLSFKASIDDSKNS--------LSTWSNTSNIHYCNW---TGVTCVTTATASLTVASINLQSLNLSGEISSSVC 96 (876)
Q Consensus 28 ~~~~~all~~k~~~~~~~~~--------~~sW~~~~~~~~C~w---~gv~c~~~~~~~~~~~~l~l~~~~l~~~~~~~~~ 96 (876)
..|+.||.+||+++.++... ..+|+.. .+||.| .||+|+..+ +|+.++|.+++++|.+|++++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~--~~~c~w~~~~GV~C~~~~----~V~~L~L~~~~l~g~lp~~l~ 102 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN--KELDMWGAQPGVSLNSNG----RVTGLSLEGFGASGRVPDAIG 102 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCS--SCGGGTTCCTTEEECTTC----CEEEEECTTSCCEEEECGGGG
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC--CCcccccCCCCeEEcCCC----CEEEEEecCcccCCcCChHHh
Confidence 36899999999998765433 3479754 589999 999998652 899999999999999999999
Q ss_pred CCCCCCeeecCCCccc------c------ccCccccCCCCCCcccCCCccc-----------------------------
Q 002826 97 ELSSLSNLNLADNLFN------Q------PIPLHLSQCSSLETLNLSNNLI----------------------------- 135 (876)
Q Consensus 97 ~l~~L~~L~L~~n~l~------~------~~p~~~~~l~~L~~L~Ls~N~l----------------------------- 135 (876)
+|++|++|+|++|.+. + .+|... +..|+ +++++|.+
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 179 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSS 179 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCC
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccccc
Confidence 9999999999999761 1 111110 11111 11111110
Q ss_pred ----c--eeecCCccccccCCCccCCccccceecccccccCCC-----------------cCcccc--CCCcceEEEccC
Q 002826 136 ----W--VLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGS-----------------VPFVFG--NFSELVVLDLSQ 190 (876)
Q Consensus 136 ----~--~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~Ls~ 190 (876)
. .+....|++++ +|..|+++++|++|+|++|++++. +|..++ ++++|++|+|++
T Consensus 180 ~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~ 258 (636)
T 4eco_A 180 RITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYN 258 (636)
T ss_dssp CCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEEC
T ss_pred ccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecC
Confidence 0 01122566776 677777777777777777777764 677766 777777777777
Q ss_pred CCCcCCCCCCcccccCcccEEEecCCC-Ccc-cCCccccCC------CCCcEEecccCccCCCCCC--ccccccccccEE
Q 002826 191 NAYLISEIPSDIGKLEKLEQLFLQSSG-FHG-VIPDSFVGL------QSLSILDLSQNNLTGEVPQ--SLGSSLLKLVSF 260 (876)
Q Consensus 191 N~~~~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L~Ls~N~l~~~ip~--~~~~~l~~L~~L 260 (876)
|+ +.+.+|..|+++++|++|+|++|+ +++ .+|..+..+ ++|++|+|++|+++ .+|. .+ ..+++|++|
T Consensus 259 n~-l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l-~~l~~L~~L 335 (636)
T 4eco_A 259 CP-NLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSL-QKMKKLGML 335 (636)
T ss_dssp CT-TCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHH-TTCTTCCEE
T ss_pred Cc-CCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhh-ccCCCCCEE
Confidence 76 356677777777777777777776 776 666666665 77777777777777 6766 44 347777777
Q ss_pred EeccccccCcCCcccccCCccceeeeecccccccCCCCCccccc-cceeecccccCCCCCCcccCCCC--cccEEEecCC
Q 002826 261 DVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLN-LERFQVQDNGFSGDFPDKLWSLP--RIKLIRAESN 337 (876)
Q Consensus 261 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N 337 (876)
+|++|+++|.+| .+..+++|++|+|++|+++ .+|..|..+++ |++|++++|+++ .+|..+..++ +|+.|++++|
T Consensus 336 ~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N 412 (636)
T 4eco_A 336 ECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYN 412 (636)
T ss_dssp ECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSS
T ss_pred eCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCC
Confidence 777777776677 6777777777777777777 66666777777 777777777777 5666665544 6777777777
Q ss_pred cccccCccccc-------cCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCC-------CccE
Q 002826 338 RFSGAIPDSIS-------MAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSP-------VMSI 403 (876)
Q Consensus 338 ~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~-------~L~~ 403 (876)
++++.+|..+. .+.+|++|+|++|++++..+..+..+++|+.|++++|+++...+..+.... +|+.
T Consensus 413 ~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~ 492 (636)
T 4eco_A 413 EIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTS 492 (636)
T ss_dssp CTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCE
T ss_pred cCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccE
Confidence 77777777666 666777777777777733333345567777777777777733333333332 6777
Q ss_pred EEccCCccccCCcCcc--cccccceEeccCCcCCCCCCcCCCCCCCcceeeC------CCCcccccCCCccccc-ccceE
Q 002826 404 INLSQNSISGQIPELK--KCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDL------SDNNLTGPIPQGLQNL-KLALF 474 (876)
Q Consensus 404 L~Ls~N~l~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l-~l~~l 474 (876)
|+|++|+++..+..+. .+++|++|+|++|+|++ +|..+..+++|+.|+| ++|++.+.+|..+..+ +++.|
T Consensus 493 L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L 571 (636)
T 4eco_A 493 IDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQL 571 (636)
T ss_dssp EECCSSCCCBCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEE
T ss_pred EECcCCcCCccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEE
Confidence 7777777775444554 77777777777777775 6777777777777777 4566677777777666 47777
Q ss_pred EccCCccccccCCcccCCCCCccccCCCCCC
Q 002826 475 NVSFNKLSGRVPYSLISGLPASYLQGNPGLC 505 (876)
Q Consensus 475 ~ls~N~l~~~~p~~~~~~~~~~~~~~N~~~C 505 (876)
++++|++ +.+|..+..++..+.+.+||+.|
T Consensus 572 ~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 572 QIGSNDI-RKVNEKITPNISVLDIKDNPNIS 601 (636)
T ss_dssp ECCSSCC-CBCCSCCCTTCCEEECCSCTTCE
T ss_pred ECCCCcC-CccCHhHhCcCCEEECcCCCCcc
Confidence 7777777 56776666666777777777666
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.2e-51 Score=490.84 Aligned_cols=443 Identities=21% Similarity=0.198 Sum_probs=376.8
Q ss_pred ccceEecCCCC------CccEEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCccc
Q 002826 62 WTGVTCVTTAT------ASLTVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLI 135 (876)
Q Consensus 62 w~gv~c~~~~~------~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 135 (876)
+.-|.|...+. ....+..++++++.+++..|..+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 55678865432 123578899999999998899999999999999999999999999999999999999999964
Q ss_pred --------------ceeecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCc
Q 002826 136 --------------WVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSD 201 (876)
Q Consensus 136 --------------~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~ 201 (876)
++|+|++|++++..|..|+++++|++|+|++|++++..+..+.++++|++|+|++|++ ....|..
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l-~~~~~~~ 172 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAI-HYLSKED 172 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCC-CEECHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcc-cccChhh
Confidence 5789999999887788888899999999999988875545555588888888888872 2222334
Q ss_pred ccccCccc------------------------------------------------------------------------
Q 002826 202 IGKLEKLE------------------------------------------------------------------------ 209 (876)
Q Consensus 202 ~~~l~~L~------------------------------------------------------------------------ 209 (876)
|..+++|+
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~ 252 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLC 252 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhh
Confidence 55555544
Q ss_pred -----EEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCcccee
Q 002826 210 -----QLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNL 284 (876)
Q Consensus 210 -----~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 284 (876)
.|++++|+++++.+..|.++++|++|++++|+++ .+|..+. .+++|++|++++|++++..|..+..+++|++|
T Consensus 253 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 330 (606)
T 3t6q_A 253 EMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLV-GLSTLKKLVLSANKFENLCQISASNFPSLTHL 330 (606)
T ss_dssp GSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCC-SCTTCCEEECTTCCCSBGGGGCGGGCTTCSEE
T ss_pred cCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhc-ccccCCEEECccCCcCcCchhhhhccCcCCEE
Confidence 4444455555555556778889999999999998 8888764 58999999999999998888889999999999
Q ss_pred eeecccccccCCC-CCccccccceeecccccCCCCC--CcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCc
Q 002826 285 SLHKNFFNGSIPG-SINECLNLERFQVQDNGFSGDF--PDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNN 361 (876)
Q Consensus 285 ~L~~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 361 (876)
++++|.+.+.+|. .|..+++|++|++++|.+++.. +..+..+++|+.|++++|++++..|..|..+++|++|++++|
T Consensus 331 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 410 (606)
T 3t6q_A 331 SIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFT 410 (606)
T ss_dssp ECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTC
T ss_pred ECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCC
Confidence 9999998865554 5899999999999999998776 788999999999999999999999999999999999999999
Q ss_pred ccCCCCCCc-cccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccC-C---cCcccccccceEeccCCcCCC
Q 002826 362 RFTSSIPQG-LGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQ-I---PELKKCRKLVSLSLADNSLTG 436 (876)
Q Consensus 362 ~l~~~~p~~-~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~-~---~~~~~l~~L~~L~Ls~N~l~~ 436 (876)
++++..|.. +.++++|+.|++++|.+++..|..|..+++|+.|++++|++++. + ..+..+++|++|+|++|++++
T Consensus 411 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 490 (606)
T 3t6q_A 411 RLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS 490 (606)
T ss_dssp CEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCE
T ss_pred cCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCc
Confidence 999876654 89999999999999999999999999999999999999999873 2 258999999999999999999
Q ss_pred CCCcCCCCCCCcceeeCCCCcccccCCCcccccc-cceEEccCCccccccCCcc--cCCCCCccccCCCCCCCCC
Q 002826 437 EIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNLK-LALFNVSFNKLSGRVPYSL--ISGLPASYLQGNPGLCGPG 508 (876)
Q Consensus 437 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-l~~l~ls~N~l~~~~p~~~--~~~~~~~~~~~N~~~C~~~ 508 (876)
..|..|..+++|++|+|++|++++..|..+..++ + .||+++|++++.+|..+ +.++..+++.+|||.|+|+
T Consensus 491 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 491 IDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred cChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 9999999999999999999999999999999885 7 99999999998777543 6778899999999999875
No 5
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-50 Score=495.85 Aligned_cols=443 Identities=21% Similarity=0.222 Sum_probs=358.7
Q ss_pred ccccceEecCCCCCccEEEEeecCCCCCcccccccccCCCCCCeeecCCCcccccc-CccccCCCCCCcccCCCccc---
Q 002826 60 CNWTGVTCVTTATASLTVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPI-PLHLSQCSSLETLNLSNNLI--- 135 (876)
Q Consensus 60 C~w~gv~c~~~~~~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l--- 135 (876)
|.|..|.+.+ ..+..++|+++.+++..+..+.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.|
T Consensus 14 ~~L~~vP~lp-----~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~ 88 (844)
T 3j0a_A 14 CNLTQVPQVL-----NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFL 88 (844)
T ss_dssp CCSSCCCSSC-----TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEE
T ss_pred CCCCCCCCCC-----CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCccc
Confidence 4566666522 25778999999999999999999999999999999766655 88999999999999999875
Q ss_pred -----------ceeecCCccccccCCCc--cCCccccceecccccccCCCcC-ccccCCCcceEEEccCCCCcCCCCCCc
Q 002826 136 -----------WVLDLSRNHIEGKIPES--IGSLVNLQVLNLGSNLLSGSVP-FVFGNFSELVVLDLSQNAYLISEIPSD 201 (876)
Q Consensus 136 -----------~~LdL~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~~~~~~~p~~ 201 (876)
++|+|++|++++.+|.. |+++++|++|+|++|++++..+ ..|+++++|++|+|++|. +.+..|..
T Consensus 89 ~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~-i~~~~~~~ 167 (844)
T 3j0a_A 89 HPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQ-IFLVCEHE 167 (844)
T ss_dssp CTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSC-CCCCCSGG
T ss_pred CHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCc-CCeeCHHH
Confidence 46889999998866665 8889999999999999887655 578899999999999987 34455667
Q ss_pred cccc--CcccEEEecCCCCcccCCccccCCCC------CcEEecccCccCCCCCCccccc--------------------
Q 002826 202 IGKL--EKLEQLFLQSSGFHGVIPDSFVGLQS------LSILDLSQNNLTGEVPQSLGSS-------------------- 253 (876)
Q Consensus 202 ~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~------L~~L~Ls~N~l~~~ip~~~~~~-------------------- 253 (876)
+..+ ++|+.|+|++|.+.+..|..+..+++ |++|+|++|++++.+|..+...
T Consensus 168 l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~ 247 (844)
T 3j0a_A 168 LEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGF 247 (844)
T ss_dssp GHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSS
T ss_pred cccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccc
Confidence 7776 78888888888888877776666655 8888888888776665543321
Q ss_pred -----------------cccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCC
Q 002826 254 -----------------LLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFS 316 (876)
Q Consensus 254 -----------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 316 (876)
.++|+.|+|++|.+.+..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+++
T Consensus 248 ~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 327 (844)
T 3j0a_A 248 GFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLG 327 (844)
T ss_dssp SCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCS
T ss_pred cccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCC
Confidence 257888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCC------------------CC---------
Q 002826 317 GDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSI------------------PQ--------- 369 (876)
Q Consensus 317 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~------------------p~--------- 369 (876)
+..|..|.++++|+.|++++|++++..+..|..+++|++|+|++|.+++.. |.
T Consensus 328 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ 407 (844)
T 3j0a_A 328 ELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIH 407 (844)
T ss_dssp CCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEE
T ss_pred ccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceee
Confidence 888888888888888888888888888888888888888888888877421 11
Q ss_pred -------------ccccccCccEEeCCCccccCCCCC-CcCCCCCccEEEccCCccccC-----Cc-CcccccccceEec
Q 002826 370 -------------GLGSVKSLYRFSASQNSFYGSLPP-NFCDSPVMSIINLSQNSISGQ-----IP-ELKKCRKLVSLSL 429 (876)
Q Consensus 370 -------------~~~~l~~L~~L~ls~N~l~~~~~~-~~~~~~~L~~L~Ls~N~l~~~-----~~-~~~~l~~L~~L~L 429 (876)
.+.++++|+.|++++|++++..+. .+..+++|+.|+|++|.+++. .+ .|.++++|++|+|
T Consensus 408 ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~L 487 (844)
T 3j0a_A 408 LSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYL 487 (844)
T ss_dssp CCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCC
T ss_pred cccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEEC
Confidence 123567777777777777765443 455677888888888888633 22 5788999999999
Q ss_pred cCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCcccccccceEEccCCccccccCCcccCCCCCccccCCCCCCCCCC
Q 002826 430 ADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNLKLALFNVSFNKLSGRVPYSLISGLPASYLQGNPGLCGPGL 509 (876)
Q Consensus 430 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~l~ls~N~l~~~~p~~~~~~~~~~~~~~N~~~C~~~~ 509 (876)
++|+|++.+|..|.++++|+.|+|++|+|++..|..+. -.++.||+++|++++.+|.. +.++..+++.+|||.|+|++
T Consensus 488 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~~~~-~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 488 NHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAPNPDV-FVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCCCSCC-CSSCCEEEEEEECCCCSSSC
T ss_pred CCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCCChhH-hCCcCEEEecCCCccccccc
Confidence 99999999999999999999999999999987776665 57899999999999888855 56788899999999999875
Q ss_pred C
Q 002826 510 S 510 (876)
Q Consensus 510 ~ 510 (876)
.
T Consensus 566 ~ 566 (844)
T 3j0a_A 566 S 566 (844)
T ss_dssp C
T ss_pred H
Confidence 3
No 6
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.8e-51 Score=498.20 Aligned_cols=404 Identities=34% Similarity=0.543 Sum_probs=333.6
Q ss_pred EEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCccc---------------ceeec
Q 002826 76 TVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLI---------------WVLDL 140 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l---------------~~LdL 140 (876)
.+..+++.++.+++.+|..++.+++|++|+|++|.+.+.+|.. .+++|++|+|++|.+ ++|+|
T Consensus 224 ~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~L 301 (768)
T 3rgz_A 224 ALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDL 301 (768)
T ss_dssp SCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEEC
T ss_pred CCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEEC
Confidence 4667788888888888888888888888888888877766654 666677777666643 35666
Q ss_pred CCccccccCCCccCCccccceecccccccCCCcCcc-ccCCCcceEEEccCCCCcCCCCCCcccc---------------
Q 002826 141 SRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFV-FGNFSELVVLDLSQNAYLISEIPSDIGK--------------- 204 (876)
Q Consensus 141 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~~~~~~~p~~~~~--------------- 204 (876)
++|++++.+|..|+++++|++|+|++|++++.+|.. |.++++|++|+|++|++ .+.+|..+.+
T Consensus 302 s~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l-~~~~p~~l~~l~~~L~~L~Ls~N~l 380 (768)
T 3rgz_A 302 SGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF-SGELPESLTNLSASLLTLDLSSNNF 380 (768)
T ss_dssp CSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEE-EECCCTTHHHHTTTCSEEECCSSEE
T ss_pred cCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCcc-CccccHHHHhhhcCCcEEEccCCCc
Confidence 666666666666666666666666666666555543 66666666666666652 2344444333
Q ss_pred ------------cCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCC
Q 002826 205 ------------LEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFP 272 (876)
Q Consensus 205 ------------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~ 272 (876)
+++|++|++++|++++.+|..|.++++|++|+|++|++++.+|..+. .+++|++|++++|++++.+|
T Consensus 381 ~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p 459 (768)
T 3rgz_A 381 SGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG-SLSKLRDLKLWLNMLEGEIP 459 (768)
T ss_dssp EEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGG-GCTTCCEEECCSSCCCSCCC
T ss_pred CCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHh-cCCCCCEEECCCCcccCcCC
Confidence 55677777777778778888899999999999999999988887764 58999999999999999999
Q ss_pred cccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCC
Q 002826 273 NGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQ 352 (876)
Q Consensus 273 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 352 (876)
..+..+++|++|+|++|++++.+|..|..+++|++|++++|++++.+|.++..+++|++|++++|++++.+|..+..+++
T Consensus 460 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 539 (768)
T 3rgz_A 460 QELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 539 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTT
T ss_pred HHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeccCcccCCCCCCcc-------------------------------------------------------------
Q 002826 353 LEQVQIDNNRFTSSIPQGL------------------------------------------------------------- 371 (876)
Q Consensus 353 L~~L~L~~N~l~~~~p~~~------------------------------------------------------------- 371 (876)
|++|++++|+++|.+|..+
T Consensus 540 L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 619 (768)
T 3rgz_A 540 LIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 619 (768)
T ss_dssp CCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCE
T ss_pred CCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccce
Confidence 9999999999988777543
Q ss_pred ---------ccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCCcCCCCCCcC
Q 002826 372 ---------GSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPS 441 (876)
Q Consensus 372 ---------~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~ 441 (876)
..+++|+.|++++|+++|.+|..|.+++.|+.|+|++|+++|.+| .++.+++|+.|||++|+++|.+|..
T Consensus 620 ~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~ 699 (768)
T 3rgz_A 620 YGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQA 699 (768)
T ss_dssp EEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGG
T ss_pred ecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChH
Confidence 345789999999999999999999999999999999999999888 8999999999999999999999999
Q ss_pred CCCCCCcceeeCCCCcccccCCCcccccccceEEccCCc-ccc
Q 002826 442 LAELPVLTYLDLSDNNLTGPIPQGLQNLKLALFNVSFNK-LSG 483 (876)
Q Consensus 442 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~l~ls~N~-l~~ 483 (876)
++.+++|++|||++|+|+|.+|..-.-..+....+.+|+ |.|
T Consensus 700 l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 700 MSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 742 (768)
T ss_dssp GGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEES
T ss_pred HhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcC
Confidence 999999999999999999999986433334444455664 443
No 7
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.6e-49 Score=479.11 Aligned_cols=447 Identities=21% Similarity=0.188 Sum_probs=290.7
Q ss_pred ccccceEecCCCC------CccEEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCc
Q 002826 60 CNWTGVTCVTTAT------ASLTVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNN 133 (876)
Q Consensus 60 C~w~gv~c~~~~~------~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 133 (876)
|.++-|.|..... ....++.++++++++++..+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 5556666754321 1235778888888888877778888888888888888888888888888888888888888
Q ss_pred cc--------------ceeecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCC
Q 002826 134 LI--------------WVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIP 199 (876)
Q Consensus 134 ~l--------------~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p 199 (876)
.| ++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+ ..++
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l--~~~~ 161 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKI--QALK 161 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCC--CCBC
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcc--cccC
Confidence 64 5688888888877777888888888888888888877777777777777777777752 2222
Q ss_pred C-ccc--ccCcccEEEecCCCCcccC---------------------------------------------------Ccc
Q 002826 200 S-DIG--KLEKLEQLFLQSSGFHGVI---------------------------------------------------PDS 225 (876)
Q Consensus 200 ~-~~~--~l~~L~~L~L~~n~l~~~~---------------------------------------------------~~~ 225 (876)
. .+. .+++|++|++++|++++.. |.+
T Consensus 162 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~ 241 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 241 (680)
T ss_dssp HHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTT
T ss_pred HHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhH
Confidence 1 111 1233333333333333222 222
Q ss_pred ccCCCC--CcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcc-----------------------------
Q 002826 226 FVGLQS--LSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNG----------------------------- 274 (876)
Q Consensus 226 ~~~l~~--L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~----------------------------- 274 (876)
|.+++. |++|+|++|++++..|. .+..+++|++|+|++|++++..|..
T Consensus 242 ~~~l~~~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i 320 (680)
T 1ziw_A 242 FLGLKWTNLTMLDLSYNNLNVVGND-SFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKI 320 (680)
T ss_dssp TGGGGGSCCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEE
T ss_pred hhccCcCCCCEEECCCCCcCccCcc-cccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccccccc
Confidence 322222 44444444444422222 2223444444444444444333322
Q ss_pred ----cccCCccceeeeecccccccCCCCCccccccceeecc----------------------------cccCCCCCCcc
Q 002826 275 ----ICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQ----------------------------DNGFSGDFPDK 322 (876)
Q Consensus 275 ----~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~----------------------------~N~l~~~~p~~ 322 (876)
|..+++|++|++++|.+++..+..|.++++|++|+++ +|++++..|..
T Consensus 321 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~ 400 (680)
T 1ziw_A 321 DDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDA 400 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTT
T ss_pred ChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhh
Confidence 2223333344444444444444444443333333332 23333333444
Q ss_pred cCCCCcccEEEecCCcccccCc-cccccCCCCCeeeccCc------------------------ccC--CCCCCcccccc
Q 002826 323 LWSLPRIKLIRAESNRFSGAIP-DSISMAAQLEQVQIDNN------------------------RFT--SSIPQGLGSVK 375 (876)
Q Consensus 323 ~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N------------------------~l~--~~~p~~~~~l~ 375 (876)
|..+++|+.|++++|++++.+| ..|..+++|++|++++| .++ +.+|..+.+++
T Consensus 401 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~ 480 (680)
T 1ziw_A 401 FSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLR 480 (680)
T ss_dssp TTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCT
T ss_pred hhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCC
Confidence 4445555555555555544333 34444444444444444 443 35677788888
Q ss_pred CccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCc---------CcccccccceEeccCCcCCCCCCcCCCCCC
Q 002826 376 SLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIP---------ELKKCRKLVSLSLADNSLTGEIPPSLAELP 446 (876)
Q Consensus 376 ~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~---------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 446 (876)
+|+.|++++|++++..+..|.++++|++|+|++|++++..+ .+.++++|++|+|++|+++...+..|.+++
T Consensus 481 ~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 560 (680)
T 1ziw_A 481 NLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLF 560 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHccccc
Confidence 89999999999998888889999999999999999886422 378899999999999999966667899999
Q ss_pred CcceeeCCCCcccccCCCccccc-ccceEEccCCccccccCCc---ccCCCCCccccCCCCCCCCCC
Q 002826 447 VLTYLDLSDNNLTGPIPQGLQNL-KLALFNVSFNKLSGRVPYS---LISGLPASYLQGNPGLCGPGL 509 (876)
Q Consensus 447 ~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~ls~N~l~~~~p~~---~~~~~~~~~~~~N~~~C~~~~ 509 (876)
+|+.|||++|+|++..+..+..+ .++.|++++|++++..|.. .+.++..+.+.+|||.|+|+.
T Consensus 561 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 561 ELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 99999999999997666667776 6999999999999766643 357788899999999999874
No 8
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.9e-51 Score=438.64 Aligned_cols=253 Identities=25% Similarity=0.410 Sum_probs=209.3
Q ss_pred CCCCCCCCceEEEEEEeC------CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 587 SSAGNGGPFGRVYILSLP------SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
..+|.|| ||+||+|++. +++.||||++........++|.+|++++++++|||||+++|+|.+++..|+|||||
T Consensus 19 ~~lG~G~-fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 97 (299)
T 4asz_A 19 RELGEGA-FGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM 97 (299)
T ss_dssp EEEEC---CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred eEEeeCC-CcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcC
Confidence 4455555 9999999763 47889999998765555678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcc------------CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccc
Q 002826 661 QMGSLGDLICRQ------------DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFAL 728 (876)
Q Consensus 661 ~~gsL~~~l~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGl 728 (876)
++|+|.+++++. ...++|..+.+++.|||.||+|||++ +|+||||||+|||+++++.+||+|||+
T Consensus 98 ~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~DFGl 174 (299)
T 4asz_A 98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGM 174 (299)
T ss_dssp TTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCSC
T ss_pred CCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECCccc
Confidence 999999999754 24699999999999999999999999 999999999999999999999999999
Q ss_pred hhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccc
Q 002826 729 DRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNG 807 (876)
Q Consensus 729 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 807 (876)
|+...............||+.|||||++.+..++.++|||||||++|||+| |+.||...... +....+......
T Consensus 175 a~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~~~~~--- 249 (299)
T 4asz_A 175 SRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECITQGRVL--- 249 (299)
T ss_dssp HHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHHTCCC---
T ss_pred ceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcCCCC---
Confidence 998765544444445568999999999999999999999999999999999 89999865432 223332221100
Q ss_pred cccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 808 AIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 808 ~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
.. +...+.++.+++.+||+.||++||||+||.+.|+++.+.
T Consensus 250 -------~~---p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 250 -------QR---PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp -------CC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------CC---CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 01 112234678999999999999999999999999998654
No 9
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-50 Score=430.83 Aligned_cols=256 Identities=25% Similarity=0.387 Sum_probs=199.6
Q ss_pred CCCCCCCCceEEEEEEeCCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCCC
Q 002826 587 SSAGNGGPFGRVYILSLPSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMGS 664 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 664 (876)
.++|.|| ||+||+|++. ..||||+++.... ...+.|.+|++++++++|||||+++|++.+ +..|+|||||++|+
T Consensus 42 ~~iG~G~-fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGs 117 (307)
T 3omv_A 42 TRIGSGS-FGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSS 117 (307)
T ss_dssp EECCCCS-SSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCB
T ss_pred eEEeeCC-CcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCC
Confidence 4566665 9999999874 3699999864332 234678999999999999999999999865 56899999999999
Q ss_pred HHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccccccc
Q 002826 665 LGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSSE 744 (876)
Q Consensus 665 L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 744 (876)
|.+++......+++..+.+++.|||.||+|||+. +|+||||||+|||+++++.+||+|||+|+..............
T Consensus 118 L~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~ 194 (307)
T 3omv_A 118 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQP 194 (307)
T ss_dssp HHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC------------C
T ss_pred HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeeccc
Confidence 9999987777899999999999999999999999 9999999999999999999999999999876543333334556
Q ss_pred cccccccCccccCC---CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcH
Q 002826 745 YALSCYNAPEYGYS---KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQ 821 (876)
Q Consensus 745 ~gt~~y~aPE~~~~---~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 821 (876)
.||+.|||||++.+ ..++.++|||||||++|||+||+.||........ ....+... ...|.+...+.
T Consensus 195 ~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~~~~~~---------~~~p~~~~~~~ 264 (307)
T 3omv_A 195 TGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRG---------YASPDLSKLYK 264 (307)
T ss_dssp CCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHTT---------CCCCCSTTSCT
T ss_pred ccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHHHHhcC---------CCCCCcccccc
Confidence 79999999998753 4689999999999999999999999976443221 11111111 11122222223
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 822 QQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 822 ~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
..+..+.+++.+||+.||++||||.||++.|+.+....
T Consensus 265 ~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 265 NCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 34456889999999999999999999999999886543
No 10
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=9e-51 Score=435.37 Aligned_cols=251 Identities=24% Similarity=0.417 Sum_probs=206.6
Q ss_pred CCCCCCCCceEEEEEEe------CCCcEEEEEEEecCC-ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEc
Q 002826 587 SSAGNGGPFGRVYILSL------PSGELIAVKKLVNFG-CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 659 (876)
.++|.|| ||+||+|.+ .+++.||||++.... ....++|.+|+.++++++|||||+++|+|.+++..++||||
T Consensus 32 ~~lG~G~-fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey 110 (308)
T 4gt4_A 32 EELGEDR-FGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 110 (308)
T ss_dssp EEEEECS-SCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eEeccCC-CcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEc
Confidence 4566666 999999976 357899999996543 23467899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhcc---------------CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEc
Q 002826 660 LQMGSLGDLICRQ---------------DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLT 724 (876)
Q Consensus 660 ~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~ 724 (876)
|++|+|.+++... ...++|..+.+++.|||.||+|||+. +|+||||||+|||+++++.+||+
T Consensus 111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~Ki~ 187 (308)
T 4gt4_A 111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKIS 187 (308)
T ss_dssp CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCEEEC
Confidence 9999999999643 23589999999999999999999999 99999999999999999999999
Q ss_pred cccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhh
Q 002826 725 DFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKIN 803 (876)
Q Consensus 725 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 803 (876)
|||+|+...............||+.|||||++.++.++.++|||||||++|||+| |+.||...... ++...+.....
T Consensus 188 DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~~~i~~~~~ 265 (308)
T 4gt4_A 188 DLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVVEMIRNRQV 265 (308)
T ss_dssp CSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHHHHHHTTCC
T ss_pred CcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC
Confidence 9999998765544444556679999999999999999999999999999999999 89999865432 33333322110
Q ss_pred cccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 002826 804 ITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLS 856 (876)
Q Consensus 804 ~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~ 856 (876)
. | .+...+..+.+++.+||+.||++||||+||++.|+.+.
T Consensus 266 ~---------~----~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 266 L---------P----CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp C---------C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred C---------C----CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 0 1 11122346789999999999999999999999998763
No 11
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.1e-50 Score=438.94 Aligned_cols=253 Identities=23% Similarity=0.394 Sum_probs=201.3
Q ss_pred CCCCCCCCceEEEEEEeC------CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 587 SSAGNGGPFGRVYILSLP------SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
.++|.|| ||+||+|++. +++.||||++........++|.+|++++++++|||||+++|+|.+++..|+|||||
T Consensus 47 ~~LG~G~-fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 125 (329)
T 4aoj_A 47 WELGEGA-FGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM 125 (329)
T ss_dssp EEEEECS-SEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred EEEccCC-CcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 4566666 9999999764 57899999997765555678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccC--------------CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccc
Q 002826 661 QMGSLGDLICRQD--------------FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDF 726 (876)
Q Consensus 661 ~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~Df 726 (876)
++|+|.+++++.. .+++|.++.+++.|||.||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 126 ~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~DF 202 (329)
T 4aoj_A 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDF 202 (329)
T ss_dssp TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCC
T ss_pred CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEccc
Confidence 9999999997542 3589999999999999999999999 9999999999999999999999999
Q ss_pred cchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcc
Q 002826 727 ALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINIT 805 (876)
Q Consensus 727 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 805 (876)
|+|+...............||+.|||||++.+..++.++|||||||++|||+| |+.||...... .....+......
T Consensus 203 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~g~~~- 279 (329)
T 4aoj_A 203 GMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAIDCITQGREL- 279 (329)
T ss_dssp C----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHHHHHHHTCCC-
T ss_pred ccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcCCCC-
Confidence 99998765444444455679999999999999999999999999999999999 89999764432 223333221111
Q ss_pred cccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 806 NGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 806 ~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
..+ ...+.++.+++.+||+.||++||||+||++.|+.+.+.
T Consensus 280 ---------~~p---~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 280 ---------ERP---RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp ---------CCC---TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ---------CCc---ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 111 11234678999999999999999999999999998654
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7.7e-49 Score=466.76 Aligned_cols=437 Identities=18% Similarity=0.165 Sum_probs=317.5
Q ss_pred ceEecCCCC------CccEEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCccc--
Q 002826 64 GVTCVTTAT------ASLTVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLI-- 135 (876)
Q Consensus 64 gv~c~~~~~------~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l-- 135 (876)
.|.|..... ....+..++|+++.+++..+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.|
T Consensus 15 ~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~ 94 (606)
T 3vq2_A 15 TYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQS 94 (606)
T ss_dssp EEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCC
T ss_pred ceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccc
Confidence 577754322 224678899999999999888999999999999999999999999999999999998777653
Q ss_pred ------------ceeecCCccccccCCCccCCccccceecccccccCC-CcCccccCCCcceEEEccCCCCcCCCCCCcc
Q 002826 136 ------------WVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSG-SVPFVFGNFSELVVLDLSQNAYLISEIPSDI 202 (876)
Q Consensus 136 ------------~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~ 202 (876)
++|+|++|++++..|..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|++ .+..|..|
T Consensus 95 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l-~~~~~~~~ 173 (606)
T 3vq2_A 95 FSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYI-QTITVNDL 173 (606)
T ss_dssp CCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCC-CEECTTTT
T ss_pred cChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcc-eecChhhh
Confidence 345555555555554555555555555555555553 3355555555555555555541 22223344
Q ss_pred cccCccc----EEEecCCCCcccCCccccCCCCCcEEecccCccCC----------------------------------
Q 002826 203 GKLEKLE----QLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTG---------------------------------- 244 (876)
Q Consensus 203 ~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---------------------------------- 244 (876)
+.+++|+ +|++++|+++++.+..|... +|+.|++++|.+++
T Consensus 174 ~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~ 252 (606)
T 3vq2_A 174 QFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEP 252 (606)
T ss_dssp HHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCG
T ss_pred hhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccCh
Confidence 4444433 45555555555444444433 55555555554320
Q ss_pred ------------------------CCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCC----
Q 002826 245 ------------------------EVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIP---- 296 (876)
Q Consensus 245 ------------------------~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~---- 296 (876)
.+|. +..+++|+.|++++|.+. .+| .+..+++|++|++++|.+. .+|
T Consensus 253 ~~~~~l~~l~l~~l~l~~~~~~~~~~~~--~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l~-~lp~~~l 327 (606)
T 3vq2_A 253 SIMEGLCDVTIDEFRLTYTNDFSDDIVK--FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQLK-QFPTLDL 327 (606)
T ss_dssp GGGTTGGGSEEEEEEECCCTTCCGGGGS--CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCCS-SCCCCCC
T ss_pred HHhhhhhhccHhheeccccccccccccc--cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccCc-ccccCCC
Confidence 0111 112333333333333333 122 3444444444555544442 222
Q ss_pred ----------------CCCccccccceeecccccCCCC--CCcccCCCCcccEEEecCCcccccCccccccCCCCCeeec
Q 002826 297 ----------------GSINECLNLERFQVQDNGFSGD--FPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQI 358 (876)
Q Consensus 297 ----------------~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 358 (876)
..+..+++|++|++++|++++. .|..+..+++|+.|++++|++++ +|..+..+++|+.|++
T Consensus 328 ~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l 406 (606)
T 3vq2_A 328 PFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDF 406 (606)
T ss_dssp SSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEEC
T ss_pred CccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeEC
Confidence 2455677788888888888765 37788888999999999999886 4588899999999999
Q ss_pred cCcccCCCCC-CccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccC-Cc-CcccccccceEeccCCcCC
Q 002826 359 DNNRFTSSIP-QGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQ-IP-ELKKCRKLVSLSLADNSLT 435 (876)
Q Consensus 359 ~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~-~~-~~~~l~~L~~L~Ls~N~l~ 435 (876)
++|++++..| ..+.++++|+.|++++|.+++..|..|..+++|+.|++++|++++. +| .+..+++|++|+|++|+++
T Consensus 407 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 486 (606)
T 3vq2_A 407 QHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLE 486 (606)
T ss_dssp TTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCC
T ss_pred CCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCC
Confidence 9999998887 6899999999999999999999999999999999999999999983 45 7999999999999999999
Q ss_pred CCCCcCCCCCCCcceeeCCCCcccccCCCccccc-ccceEEccCCccccccCCcc--c-CCCCCccccCCCCCCCCCC
Q 002826 436 GEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL-KLALFNVSFNKLSGRVPYSL--I-SGLPASYLQGNPGLCGPGL 509 (876)
Q Consensus 436 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~ls~N~l~~~~p~~~--~-~~~~~~~~~~N~~~C~~~~ 509 (876)
+.+|..|..+++|++|+|++|++++.+|..+..+ .++.||+++|+++ .+|..+ + .++..+++.+|||.|+|++
T Consensus 487 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 487 QISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred ccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 9999999999999999999999999889999988 5999999999998 567553 2 3577889999999999875
No 13
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-48 Score=465.73 Aligned_cols=451 Identities=18% Similarity=0.232 Sum_probs=371.1
Q ss_pred CChhHHHHHHHHHhhccCCCCCCCCCCCCCC--CCCccccc-eEecCCCCCccEEEEeecCCCCCcccccccccCCCCCC
Q 002826 26 SASTEKDTLLSFKASIDDSKNSLSTWSNTSN--IHYCNWTG-VTCVTTATASLTVASINLQSLNLSGEISSSVCELSSLS 102 (876)
Q Consensus 26 ~~~~~~~all~~k~~~~~~~~~~~sW~~~~~--~~~C~w~g-v~c~~~~~~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~ 102 (876)
.++.....-.|+++-...-.+ ..|....+ ...|.|.. ..|...+. ...|+.- .-.+++
T Consensus 24 ~~~~~~~d~~aL~~~~~~~~~--~~w~~~~~~~~~~~~W~~~~~~c~w~~-~~GV~C~----------------~~~~V~ 84 (636)
T 4eco_A 24 RTAEYIKDYLALKEIWDALNG--KNWSQQGFGTQPGANWNFNKELDMWGA-QPGVSLN----------------SNGRVT 84 (636)
T ss_dssp CCCHHHHHHHHHHHHHHHTTG--GGCCCCC------CCCCCSSCGGGTTC-CTTEEEC----------------TTCCEE
T ss_pred hhhhHHHHHHHHHHHHHHcCC--CCcccCCcCCccCCCCCCCCCcccccC-CCCeEEc----------------CCCCEE
Confidence 345666778888877666543 36864332 22357862 22322210 0122210 004678
Q ss_pred eeecCCCccccccCccccCCCCCCcccCCCcccc-----------------------eeecCCccccccCCCccCCc-c-
Q 002826 103 NLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIW-----------------------VLDLSRNHIEGKIPESIGSL-V- 157 (876)
Q Consensus 103 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----------------------~LdL~~n~l~~~~p~~~~~l-~- 157 (876)
.|+|++|++.|.+|.+|++|++|++|+|++|.+. .+++++|.+.+.+|..+..+ .
T Consensus 85 ~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~ 164 (636)
T 4eco_A 85 GLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKD 164 (636)
T ss_dssp EEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHH
T ss_pred EEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHH
Confidence 9999999999999999999999999999999641 15666777777777766632 2
Q ss_pred -----------------ccceeccc--ccccCCCcCccccCCCcceEEEccCCCCcCCC-----------------CCCc
Q 002826 158 -----------------NLQVLNLG--SNLLSGSVPFVFGNFSELVVLDLSQNAYLISE-----------------IPSD 201 (876)
Q Consensus 158 -----------------~L~~L~L~--~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~-----------------~p~~ 201 (876)
.++.+.+. +|++++ +|..|+++++|++|+|++|++ .+. +|..
T Consensus 165 l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l-~~~~~~~~~~~~~~~~~~~~ip~~ 242 (636)
T 4eco_A 165 CINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPF-VAENICEAWENENSEYAQQYKTED 242 (636)
T ss_dssp HHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCC-CGGGBSSSCSCTTSHHHHHHTTSC
T ss_pred HhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcc-ccccccccccccccchhcccCchh
Confidence 22223332 689998 899999999999999999983 333 9999
Q ss_pred cc--ccCcccEEEecCCCCcccCCccccCCCCCcEEecccCc-cCC-CCCCcccc-----ccccccEEEeccccccCcCC
Q 002826 202 IG--KLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNN-LTG-EVPQSLGS-----SLLKLVSFDVSQNKLSGSFP 272 (876)
Q Consensus 202 ~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~-~ip~~~~~-----~l~~L~~L~L~~N~l~~~~~ 272 (876)
++ ++++|++|+|++|++.+.+|..|.++++|++|+|++|+ ++| .+|..++. .+++|++|+|++|+++ .+|
T Consensus 243 l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip 321 (636)
T 4eco_A 243 LKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFP 321 (636)
T ss_dssp CCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCC
T ss_pred hhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccC
Confidence 99 99999999999999999999999999999999999999 998 78887754 1399999999999999 788
Q ss_pred c--ccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCc-ccEEEecCCcccccCcccccc
Q 002826 273 N--GICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPR-IKLIRAESNRFSGAIPDSISM 349 (876)
Q Consensus 273 ~--~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~ 349 (876)
. .+.++++|++|++++|+++|.+| .|..+++|++|++++|+++ .+|..+..+++ |+.|++++|+++ .+|..+..
T Consensus 322 ~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~ 398 (636)
T 4eco_A 322 VETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDA 398 (636)
T ss_dssp CHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCT
T ss_pred chhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhh
Confidence 8 99999999999999999999999 9999999999999999999 88889999999 999999999999 77888877
Q ss_pred CC--CCCeeeccCcccCCCCCCccc-------cccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCcC-cc
Q 002826 350 AA--QLEQVQIDNNRFTSSIPQGLG-------SVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPE-LK 419 (876)
Q Consensus 350 l~--~L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~-~~ 419 (876)
.. +|++|++++|++++.+|..+. .+++|+.|++++|++++..+..+..+++|+.|+|++|+++..++. +.
T Consensus 399 ~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~ 478 (636)
T 4eco_A 399 KSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLK 478 (636)
T ss_dssp TCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSE
T ss_pred cccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhc
Confidence 65 899999999999999999998 888999999999999966556677799999999999999965553 33
Q ss_pred cc-------cccceEeccCCcCCCCCCcCCC--CCCCcceeeCCCCcccccCCCccccc-ccceEEc------cCCcccc
Q 002826 420 KC-------RKLVSLSLADNSLTGEIPPSLA--ELPVLTYLDLSDNNLTGPIPQGLQNL-KLALFNV------SFNKLSG 483 (876)
Q Consensus 420 ~l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~l------s~N~l~~ 483 (876)
.. ++|++|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..+ +++.|++ ++|++.+
T Consensus 479 ~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~ 556 (636)
T 4eco_A 479 DENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLR 556 (636)
T ss_dssp ETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCC
T ss_pred cccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccc
Confidence 33 39999999999999 7788776 99999999999999997 89888887 5999999 5688899
Q ss_pred ccCCcc--cCCCCCccccCCCC
Q 002826 484 RVPYSL--ISGLPASYLQGNPG 503 (876)
Q Consensus 484 ~~p~~~--~~~~~~~~~~~N~~ 503 (876)
.+|..+ +.++..+++.+|.-
T Consensus 557 ~~p~~l~~l~~L~~L~Ls~N~l 578 (636)
T 4eco_A 557 EWPEGITLCPSLTQLQIGSNDI 578 (636)
T ss_dssp CCCTTGGGCSSCCEEECCSSCC
T ss_pred cChHHHhcCCCCCEEECCCCcC
Confidence 999765 67788889999976
No 14
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.4e-48 Score=418.40 Aligned_cols=249 Identities=25% Similarity=0.379 Sum_probs=206.3
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
.|....++|.|+ ||+||+|... +|+.||||++........+.+.+|+++++.++|||||++++++.+++..|+|||||
T Consensus 75 ~y~~~~~iG~G~-fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 75 YLDNFIKIGEGS-TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp TEEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hcEEeEEeecCc-CeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 344556666666 9999999764 79999999998766666778899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQST 740 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 740 (876)
+||+|.+++.+. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..... .
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--C
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--c
Confidence 999999999763 589999999999999999999999 999999999999999999999999999987754321 2
Q ss_pred cccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhc
Q 002826 741 MSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCY 820 (876)
Q Consensus 741 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 820 (876)
....+||+.|||||++.+..|+.++||||+||++|||++|++||....... ....+..... +.+ ..+
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~~~~~----------~~~-~~~ 293 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRDNLP----------PRL-KNL 293 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSSC----------CCC-SCG
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHcCCC----------CCC-Ccc
Confidence 345579999999999999999999999999999999999999998654322 2222222110 000 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 821 QQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 821 ~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
...+.++.+++.+||+.||++|||+.|+++.
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1223467899999999999999999999874
No 15
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.5e-48 Score=418.20 Aligned_cols=250 Identities=23% Similarity=0.227 Sum_probs=201.0
Q ss_pred cCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCCC
Q 002826 586 KSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMGS 664 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 664 (876)
..++|.|| ||+||+|+. .+|+.||||++..... ..+|+.+++.++|||||++++++.+++..|+|||||+||+
T Consensus 63 ~~~lG~G~-fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 136 (336)
T 4g3f_A 63 QPRVGRGS-FGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 136 (336)
T ss_dssp EEEEEEET-TEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred CcEeccCC-CeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCc
Confidence 34566666 999999976 4799999999975421 2469999999999999999999999999999999999999
Q ss_pred HHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCC-CeEEccccchhhccccccc---cc
Q 002826 665 LGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADF-EPKLTDFALDRIVGEAAFQ---ST 740 (876)
Q Consensus 665 L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~-~~kl~DfGla~~~~~~~~~---~~ 740 (876)
|.+++.+.+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++ ++||+|||+|+........ ..
T Consensus 137 L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~ 212 (336)
T 4g3f_A 137 LGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212 (336)
T ss_dssp HHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----------
T ss_pred HHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceec
Confidence 999997764 699999999999999999999999 999999999999999887 6999999999877543221 12
Q ss_pred cccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhc
Q 002826 741 MSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCY 820 (876)
Q Consensus 741 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 820 (876)
.....||+.|||||++.+..++.++||||+||++|||+||++||........ ...+.. .. +.....+
T Consensus 213 ~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~i~~---~~--------~~~~~~~ 279 (336)
T 4g3f_A 213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL--CLKIAS---EP--------PPIREIP 279 (336)
T ss_dssp -CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC--HHHHHH---SC--------CGGGGSC
T ss_pred CCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH--HHHHHc---CC--------CCchhcC
Confidence 2345699999999999999999999999999999999999999987554332 111111 11 1111222
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 821 QQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 821 ~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
...+..+.+++.+||++||++|||+.|+++.|......
T Consensus 280 ~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 280 PSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 23345678999999999999999999999988876543
No 16
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.9e-49 Score=425.61 Aligned_cols=247 Identities=23% Similarity=0.333 Sum_probs=197.6
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEc
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 659 (876)
|.....+|.|| ||+||+|+. .+|+.||||++..... ...+.+.+|++++++++|||||++++++.+++..|+||||
T Consensus 26 Y~~~~~lG~G~-fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy 104 (350)
T 4b9d_A 26 YVRLQKIGEGS-FGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY 104 (350)
T ss_dssp EEEEEEC-------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEeEEEecCC-CeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 44445566655 999999965 5799999999976432 2346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 660 LQMGSLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 660 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
|+||+|.+++... +..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.......
T Consensus 105 ~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~- 180 (350)
T 4b9d_A 105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE- 180 (350)
T ss_dssp CTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH-
T ss_pred CCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCcc-
Confidence 9999999999755 45679999999999999999999999 999999999999999999999999999987754321
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
......||+.|||||++.+..++.++||||+||++|||+||++||....... ...+..... ...+.
T Consensus 181 -~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-----~~~~i~~~~---~~~~~----- 246 (350)
T 4b9d_A 181 -LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-----LVLKIISGS---FPPVS----- 246 (350)
T ss_dssp -HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHTC---CCCCC-----
T ss_pred -cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-----HHHHHHcCC---CCCCC-----
Confidence 2234569999999999999999999999999999999999999998654322 111111111 00111
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
...+.++.++|.+||+.||++|||+.|+++
T Consensus 247 --~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 247 --LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112346789999999999999999999986
No 17
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.5e-47 Score=450.14 Aligned_cols=409 Identities=18% Similarity=0.162 Sum_probs=348.3
Q ss_pred EEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCccc--------------ceeecC
Q 002826 76 TVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLI--------------WVLDLS 141 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l--------------~~LdL~ 141 (876)
.+..++++++.+.+..|..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.| ++|+|+
T Consensus 58 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~ 137 (606)
T 3t6q_A 58 NLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLG 137 (606)
T ss_dssp TCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECC
T ss_pred cceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECC
Confidence 456678888888887788888888888888888888887788888888888888888753 467788
Q ss_pred CccccccCCCccCCccccceecccccccCCCcCccccCCCcce--EEEccCCCCc-------------------------
Q 002826 142 RNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELV--VLDLSQNAYL------------------------- 194 (876)
Q Consensus 142 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~--~L~Ls~N~~~------------------------- 194 (876)
+|++++..+..+..+++|++|+|++|++++..|..|+.+++|+ +|++++|++.
T Consensus 138 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~ 217 (606)
T 3t6q_A 138 SNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLV 217 (606)
T ss_dssp SSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHH
T ss_pred CCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHH
Confidence 8888765444444577777777777777766666666666666 5555555421
Q ss_pred ------------------------------------------------CCCCC-CcccccCcccEEEecCCCCcccCCcc
Q 002826 195 ------------------------------------------------ISEIP-SDIGKLEKLEQLFLQSSGFHGVIPDS 225 (876)
Q Consensus 195 ------------------------------------------------~~~~p-~~~~~l~~L~~L~L~~n~l~~~~~~~ 225 (876)
+..++ ..|.++++|++|++++|+++ .+|..
T Consensus 218 ~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~ 296 (606)
T 3t6q_A 218 IFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSG 296 (606)
T ss_dssp HHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSS
T ss_pred HhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChh
Confidence 22333 33788999999999999999 56888
Q ss_pred ccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCc-ccccCCccceeeeecccccccC--CCCCccc
Q 002826 226 FVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPN-GICKANGLVNLSLHKNFFNGSI--PGSINEC 302 (876)
Q Consensus 226 ~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~i~~~~--~~~~~~l 302 (876)
+.++++|++|++++|++++..|. .+..+++|++|++++|++.+.+|. .+..+++|++|++++|.+++.. +..+..+
T Consensus 297 l~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l 375 (606)
T 3t6q_A 297 LVGLSTLKKLVLSANKFENLCQI-SASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNL 375 (606)
T ss_dssp CCSCTTCCEEECTTCCCSBGGGG-CGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTC
T ss_pred hcccccCCEEECccCCcCcCchh-hhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccC
Confidence 99999999999999999944444 446799999999999999876655 4899999999999999999877 8899999
Q ss_pred cccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCcc-ccccCCCCCeeeccCcccCCCCCCccccccCccEEe
Q 002826 303 LNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPD-SISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFS 381 (876)
Q Consensus 303 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 381 (876)
++|++|++++|++++..|..|..+++|+.|++++|++++..+. .+..+++|++|++++|++++..|..+..+++|++|+
T Consensus 376 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 455 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLN 455 (606)
T ss_dssp TTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEE
Confidence 9999999999999999999999999999999999999988765 489999999999999999999999999999999999
Q ss_pred CCCccccCC---CCCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCc
Q 002826 382 ASQNSFYGS---LPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNN 457 (876)
Q Consensus 382 ls~N~l~~~---~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 457 (876)
+++|++++. .+..+..+++|+.|+|++|++++.+| .|..+++|++|+|++|++++..|..|..+++| .|+|++|+
T Consensus 456 L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~ 534 (606)
T 3t6q_A 456 LQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNH 534 (606)
T ss_dssp CTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSC
T ss_pred CCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCc
Confidence 999999873 34679999999999999999999877 79999999999999999999999999999999 99999999
Q ss_pred ccccCCCccccc-ccceEEccCCccccccCC
Q 002826 458 LTGPIPQGLQNL-KLALFNVSFNKLSGRVPY 487 (876)
Q Consensus 458 l~~~~p~~~~~l-~l~~l~ls~N~l~~~~p~ 487 (876)
+++.+|..+..+ +++.+++++|++.+..+.
T Consensus 535 l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 535 ISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp CCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred ccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 999888888877 689999999999987763
No 18
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.2e-47 Score=451.06 Aligned_cols=428 Identities=20% Similarity=0.219 Sum_probs=301.4
Q ss_pred CccccceEecCCCC--------CccEEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccC
Q 002826 59 YCNWTGVTCVTTAT--------ASLTVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNL 130 (876)
Q Consensus 59 ~C~w~gv~c~~~~~--------~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 130 (876)
.|.|.|| |+.... ....+..++++++++++..|..+..+++|++|+|++|++++..|..|+++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5999998 865421 1235788999999999988999999999999999999999999999999999998877
Q ss_pred CCcccceeecCCccccccCCCccCCccccceecccccccCCC-cCccccCCCcceEEEccCCCCcCCCCC-CcccccCcc
Q 002826 131 SNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGS-VPFVFGNFSELVVLDLSQNAYLISEIP-SDIGKLEKL 208 (876)
Q Consensus 131 s~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~~~~~~~p-~~~~~l~~L 208 (876)
++|. +++..|..|+++++|++|+|++|++++. .|..|+++++|++|+|++|++ .+.+| ..|.++++|
T Consensus 82 s~n~----------l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~-~~~~~~~~~~~l~~L 150 (549)
T 2z81_A 82 SDNH----------LSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVET-FSEIRRIDFAGLTSL 150 (549)
T ss_dssp TTSC----------CCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSS-CCEECTTTTTTCCEE
T ss_pred CCCc----------cCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCcc-ccccCHhhhhccccc
Confidence 7664 3444444455555555555555555532 344455555555555555542 23333 345555555
Q ss_pred cEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccC-------------------
Q 002826 209 EQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSG------------------- 269 (876)
Q Consensus 209 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~------------------- 269 (876)
++|++++|++++..|..+..+++|++|++++|.++ .+|..++..+++|++|++++|++++
T Consensus 151 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~ 229 (549)
T 2z81_A 151 NELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLA 229 (549)
T ss_dssp EEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEE
T ss_pred CeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhccccee
Confidence 55555555555555555555555555555555544 4444333334455555555555443
Q ss_pred --------cCCc----ccccCCccceeeeecccccccCC---------CC--------------------------Cccc
Q 002826 270 --------SFPN----GICKANGLVNLSLHKNFFNGSIP---------GS--------------------------INEC 302 (876)
Q Consensus 270 --------~~~~----~~~~l~~L~~L~L~~N~i~~~~~---------~~--------------------------~~~l 302 (876)
..+. .+..+++|+.|++++|.+.+... .. +...
T Consensus 230 l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~ 309 (549)
T 2z81_A 230 FRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLL 309 (549)
T ss_dssp EESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHS
T ss_pred ccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhc
Confidence 2221 22345566666666666554211 00 1223
Q ss_pred cccceeecccccCCCCCCccc-CCCCcccEEEecCCcccccCcc---ccccCCCCCeeeccCcccCCCCC--CccccccC
Q 002826 303 LNLERFQVQDNGFSGDFPDKL-WSLPRIKLIRAESNRFSGAIPD---SISMAAQLEQVQIDNNRFTSSIP--QGLGSVKS 376 (876)
Q Consensus 303 ~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~ 376 (876)
.+|++|++++|+++ .+|..+ ..+++|+.|++++|++++..|. .+..+++|++|++++|++++..+ ..+..+++
T Consensus 310 ~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~ 388 (549)
T 2z81_A 310 EKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKN 388 (549)
T ss_dssp TTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTT
T ss_pred ccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCC
Confidence 56788888888887 566655 5799999999999999987643 47888999999999999986543 45889999
Q ss_pred ccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCC
Q 002826 377 LYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDN 456 (876)
Q Consensus 377 L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 456 (876)
|++|++++|+++ .+|..+..+++|++|++++|++++.+..+ .++|++|+|++|+|++.+ ..+++|++|+|++|
T Consensus 389 L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N 461 (549)
T 2z81_A 389 LTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRN 461 (549)
T ss_dssp CCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSS
T ss_pred CCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCC
Confidence 999999999998 67888999999999999999998665443 268999999999999753 58899999999999
Q ss_pred cccccCCCcccccccceEEccCCccccccCCcc--cCCCCCccccCCCCCCCCC
Q 002826 457 NLTGPIPQGLQNLKLALFNVSFNKLSGRVPYSL--ISGLPASYLQGNPGLCGPG 508 (876)
Q Consensus 457 ~l~~~~p~~~~~l~l~~l~ls~N~l~~~~p~~~--~~~~~~~~~~~N~~~C~~~ 508 (876)
+|+ .+|.....-.++.||+++|++++.+|..+ +.++..+++.+|||.|+|+
T Consensus 462 ~l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 462 KLK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CCS-SCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred ccC-cCCCcccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 999 67774332368999999999998777543 6778889999999999875
No 19
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-46 Score=443.97 Aligned_cols=415 Identities=20% Similarity=0.219 Sum_probs=302.0
Q ss_pred EEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCC
Q 002826 76 TVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGS 155 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~ 155 (876)
.+..++++++++++..+..+.++++|++|+|++|++++..|..|+++++|++|+|++|.+ ++..|..|++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l----------~~~~~~~~~~ 98 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI----------QSLALGAFSG 98 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC----------CEECTTTTTT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC----------CccCHhhhcC
Confidence 577899999999998888999999999999999999998899999999999997777653 3333444555
Q ss_pred ccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCC---
Q 002826 156 LVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSL--- 232 (876)
Q Consensus 156 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--- 232 (876)
+++|++|+|++|++++..+..|+++++|++|+|++|.+....+|..|.++++|++|++++|++++..+..|..+++|
T Consensus 99 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~ 178 (570)
T 2z63_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (570)
T ss_dssp CTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTC
T ss_pred ccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchh
Confidence 55555555555555444333445555555555555542111244445555555555555555544444444444444
Q ss_pred -cEEecccCccCCCCCCccc------------------------------------------------------------
Q 002826 233 -SILDLSQNNLTGEVPQSLG------------------------------------------------------------ 251 (876)
Q Consensus 233 -~~L~Ls~N~l~~~ip~~~~------------------------------------------------------------ 251 (876)
+.|++++|.+++ +++..+
T Consensus 179 ~~~L~l~~n~l~~-~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l 257 (570)
T 2z63_A 179 NLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 257 (570)
T ss_dssp CCEEECTTCCCCE-ECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGS
T ss_pred hhhcccCCCCcee-cCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhcccccc
Confidence 444554444442 222222
Q ss_pred ---------------------cccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeec
Q 002826 252 ---------------------SSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQV 310 (876)
Q Consensus 252 ---------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 310 (876)
..+++|++|++++|+++ .+|..+..+ +|++|++++|.+. .+|. ..+++|++|++
T Consensus 258 ~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l 332 (570)
T 2z63_A 258 TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTF 332 (570)
T ss_dssp EEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEE
T ss_pred chhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeC
Confidence 23455555555555555 345555555 5555666655555 2232 34556666666
Q ss_pred ccccCCCCCCcccCCCCcccEEEecCCcccccC--ccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCcccc
Q 002826 311 QDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAI--PDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFY 388 (876)
Q Consensus 311 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 388 (876)
++|.+.+..+. ..+++|+.|++++|++++.. |..+..+++|++|++++|++++..+. +..+++|+.|++++|.+.
T Consensus 333 ~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~ 409 (570)
T 2z63_A 333 TSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLK 409 (570)
T ss_dssp ESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEE
T ss_pred cCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccc
Confidence 66666555444 67889999999999998765 77888999999999999999965554 999999999999999999
Q ss_pred CCCC-CCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCCcCC-CCCCcCCCCCCCcceeeCCCCcccccCCCc
Q 002826 389 GSLP-PNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLT-GEIPPSLAELPVLTYLDLSDNNLTGPIPQG 465 (876)
Q Consensus 389 ~~~~-~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 465 (876)
+..| ..|..+++|++|++++|.+++.++ .+.++++|++|+|++|+++ +.+|..|..+++|++|+|++|++++..|..
T Consensus 410 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~ 489 (570)
T 2z63_A 410 QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489 (570)
T ss_dssp SCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT
T ss_pred cccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhh
Confidence 8876 578999999999999999998777 7899999999999999998 578999999999999999999999988999
Q ss_pred cccc-ccceEEccCCccccccCCcc--cCCCCCccccCCCCCCCCCC
Q 002826 466 LQNL-KLALFNVSFNKLSGRVPYSL--ISGLPASYLQGNPGLCGPGL 509 (876)
Q Consensus 466 ~~~l-~l~~l~ls~N~l~~~~p~~~--~~~~~~~~~~~N~~~C~~~~ 509 (876)
+..+ +++.|++++|++++..|..+ +.++..+++.+||+.|+|+.
T Consensus 490 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 490 FNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred hhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 9887 59999999999998766443 56778889999999998864
No 20
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-47 Score=405.02 Aligned_cols=242 Identities=21% Similarity=0.294 Sum_probs=190.9
Q ss_pred CCCCCCCceEEEEEEe-CCCcEEEEEEEecCC--ccCHHHHHHHHHHHhhccCccccceeeEEEe----CCeEEEEEEcC
Q 002826 588 SAGNGGPFGRVYILSL-PSGELIAVKKLVNFG--CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHS----DESIFLIYEFL 660 (876)
Q Consensus 588 ~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~ 660 (876)
++|.|| ||+||+|.. .+++.||+|++.... ....+.+.+|++++++++|||||+++++|.+ ++.+|+|||||
T Consensus 33 ~iG~G~-fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 33 EIGRGS-FKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEECS-SEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred EEecCc-CcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 355555 999999966 479999999996542 2234678999999999999999999999875 34689999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC-CCCeEEccccchhhcccccccc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA-DFEPKLTDFALDRIVGEAAFQS 739 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~-~~~~kl~DfGla~~~~~~~~~~ 739 (876)
+||+|.+++.+.+ .+++..+..++.||+.||+|||++.. +|+||||||+|||++. ++.+||+|||+|+.....
T Consensus 112 ~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~~~-~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~---- 185 (290)
T 3fpq_A 112 TSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---- 185 (290)
T ss_dssp CSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSSS-CCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT----
T ss_pred CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCC-CEEecccChhheeEECCCCCEEEEeCcCCEeCCCC----
Confidence 9999999997654 79999999999999999999999811 3999999999999984 799999999999865432
Q ss_pred ccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhh
Q 002826 740 TMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANC 819 (876)
Q Consensus 740 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 819 (876)
......||+.|||||++.+ +++.++|||||||++|||+||+.||........ ..+...... ..+.+...
T Consensus 186 ~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~----~~~~i~~~~------~~~~~~~~ 254 (290)
T 3fpq_A 186 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ----IYRRVTSGV------KPASFDKV 254 (290)
T ss_dssp SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH----HHHHHTTTC------CCGGGGGC
T ss_pred ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH----HHHHHHcCC------CCCCCCcc
Confidence 2234569999999998765 689999999999999999999999975432221 111111110 01111111
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 820 YQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 820 ~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
.+.++.+++.+||+.||++|||++|+++
T Consensus 255 ---~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 255 ---AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1235789999999999999999999986
No 21
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.1e-48 Score=413.67 Aligned_cols=246 Identities=20% Similarity=0.275 Sum_probs=202.7
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecC---CccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNF---GCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
|.-...+|.|+ ||+||+|+. .+|+.||||++.+. .....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 34 y~i~~~lG~G~-fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmE 112 (311)
T 4aw0_A 34 FKFGKILGEGS-FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS 112 (311)
T ss_dssp EEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cEEEEEEeccc-CeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 43444555555 999999965 58999999999653 22455789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
||+||+|.+++.+.+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+......
T Consensus 113 y~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 113 YAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred cCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 999999999997764 699999999999999999999999 9999999999999999999999999999987644433
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
......+||+.|||||++.+..++.++||||+||++|||+||++||....... ....+. ...... .+
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~---~~~~~~----p~---- 255 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL--IFAKII---KLEYDF----PE---- 255 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH---HTCCCC----CT----
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH---cCCCCC----Cc----
Confidence 34455679999999999998899999999999999999999999998654322 111111 111001 11
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVV 849 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell 849 (876)
..+.++.+++.+|++.||++|||++|+.
T Consensus 256 ---~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 256 ---KFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ---TCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ---ccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1233578999999999999999999874
No 22
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.9e-47 Score=419.39 Aligned_cols=249 Identities=25% Similarity=0.386 Sum_probs=206.5
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
.|....++|.|+ ||+||+|.. .+|+.||||++........+.+.+|+++|+.++|||||+++++|.+++.+|+|||||
T Consensus 152 ~y~~~~~iG~G~-fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 152 YLDNFIKIGEGS-TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp TEEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hcEeeeEeccCc-CcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 455556666666 999999976 479999999998776667778999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQST 740 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 740 (876)
+||+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.... ..
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 303 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--CC
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC--cc
Confidence 999999999754 589999999999999999999999 99999999999999999999999999998775432 12
Q ss_pred cccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhc
Q 002826 741 MSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCY 820 (876)
Q Consensus 741 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 820 (876)
....+||+.|||||++.+..|+.++||||+||++|||++|++||....... ....+..... +.+ ..+
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~~~~~----------~~~-~~~ 370 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRDNLP----------PRL-KNL 370 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCC----------CCC-SCT
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHcCCC----------CCC-ccc
Confidence 345579999999999999999999999999999999999999997654322 2222222110 000 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 821 QQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 821 ~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
...+..+.+++.+||+.||++|||+.|+++.
T Consensus 371 ~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 371 HKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp TSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1223467899999999999999999999873
No 23
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.1e-47 Score=410.45 Aligned_cols=263 Identities=25% Similarity=0.306 Sum_probs=197.2
Q ss_pred CCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCC----eEEEEEEcCCC
Q 002826 587 SSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDE----SIFLIYEFLQM 662 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~ 662 (876)
..+|.|| ||+||+|++ +|+.||||++.... .....++.|+..+.+++|||||+++|+|.+++ .+|+|||||++
T Consensus 9 ~~iG~G~-fG~Vy~~~~-~g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 9 ESIGKGR-FGEVWRGKW-RGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEECS-SSEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEeeCC-CeEEEEEEE-CCEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 3455555 999999988 69999999986532 11223345666677889999999999998754 58999999999
Q ss_pred CCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccC-----CCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 663 GSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDY-----VPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 663 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
|+|.+++++. .++|..+.+++.|++.||+|||+++ .++|+||||||+|||++.++++||+|||+|+.......
T Consensus 86 gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 163 (303)
T 3hmm_A 86 GSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 163 (303)
T ss_dssp CBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTT
T ss_pred CcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCC
Confidence 9999999764 5899999999999999999999862 45899999999999999999999999999987754332
Q ss_pred c--cccccccccccccCccccCCC------CCCCccchHHHHHHHHHHHhCCCCCCCCCcch----------hhHHHHHH
Q 002826 738 Q--STMSSEYALSCYNAPEYGYSK------KATAQMDAYSFGVVLLELITGRQAEQAEPAES----------LDVVKWVR 799 (876)
Q Consensus 738 ~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~----------~~~~~~~~ 799 (876)
. .......||+.|||||++.+. .++.++|||||||++|||+||++||....... ........
T Consensus 164 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 243 (303)
T 3hmm_A 164 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRK 243 (303)
T ss_dssp EESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHH
T ss_pred ceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHH
Confidence 2 122345699999999998654 35779999999999999999988775432211 11111111
Q ss_pred HHhhcccccccccChhhhhh--cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 800 RKINITNGAIQVLDPKIANC--YQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 800 ~~~~~~~~~~~~~d~~~~~~--~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
.. ....++|.++.. ..+....+.+++.+||+.||++||||.||++.|+++.++.+
T Consensus 244 ~~------~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ 300 (303)
T 3hmm_A 244 VV------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp HH------TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HH------hcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcC
Confidence 11 111223333221 12445678899999999999999999999999999876543
No 24
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.2e-47 Score=399.29 Aligned_cols=243 Identities=23% Similarity=0.351 Sum_probs=185.7
Q ss_pred cccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEc
Q 002826 584 DEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 659 (876)
|++.+..|.|+||+||+|.. .+|+.||+|++.+.. ......+.+|++++++++|||||++++++.+++..|+||||
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy 94 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeC
Confidence 34444444455999999976 479999999997542 23356789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccc
Q 002826 660 LQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQS 739 (876)
Q Consensus 660 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 739 (876)
+ +|+|.+++.+.+ .+++..+..++.||+.|++|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 95 ~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~--- 166 (275)
T 3hyh_A 95 A-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--- 166 (275)
T ss_dssp C-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred C-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCC---
Confidence 9 679999997654 799999999999999999999999 99999999999999999999999999998765432
Q ss_pred ccccccccccccCccccCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 740 TMSSEYALSCYNAPEYGYSKKA-TAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 740 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
......||+.|||||++.+..+ +.++||||+||++|||+||+.||....... ....+. ...... .+
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~--~~~~i~---~~~~~~----p~---- 233 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV--LFKNIS---NGVYTL----PK---- 233 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH---HTCCCC----CT----
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHH---cCCCCC----CC----
Confidence 2334569999999999987765 689999999999999999999997644322 111111 111001 11
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
..+.++.+++.+|++.||++|||++|+++
T Consensus 234 ---~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 234 ---FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---CCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 12345789999999999999999999987
No 25
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.2e-47 Score=418.34 Aligned_cols=257 Identities=24% Similarity=0.337 Sum_probs=205.1
Q ss_pred cCCCCCCCCceEEEEEEeC------CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccC-ccccceeeEEEeC-CeEEEE
Q 002826 586 KSSAGNGGPFGRVYILSLP------SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRH-KNIVKVLGFFHSD-ESIFLI 656 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~-~~~~lv 656 (876)
..+.+|.|+||+||+|.+. .++.||||++..... ...+.+.+|++++++++| ||||+++|+|.++ +..|+|
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 3344444559999999753 246899999975432 234678999999999965 8999999999764 568999
Q ss_pred EEcCCCCCHHHHhhcc---------------CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCe
Q 002826 657 YEFLQMGSLGDLICRQ---------------DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEP 721 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~ 721 (876)
||||++|+|.+++++. ...+++..+..++.|||.||+|||++ +|+||||||+|||+++++.+
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~v 224 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVV 224 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeCCCCCE
Confidence 9999999999999753 23489999999999999999999999 99999999999999999999
Q ss_pred EEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHH
Q 002826 722 KLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRR 800 (876)
Q Consensus 722 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 800 (876)
||+|||+|+...............||+.|||||++.+..++.++|||||||++|||+| |+.||....... .+...+..
T Consensus 225 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~-~~~~~i~~ 303 (353)
T 4ase_A 225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKE 303 (353)
T ss_dssp EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHH
T ss_pred EECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-HHHHHHHc
Confidence 9999999998765444444455678999999999999999999999999999999998 999998654332 22222222
Q ss_pred HhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 801 KINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 801 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
... +..+. ..+.++.+++.+||+.||++||||.||++.|+++.+..
T Consensus 304 g~~----------~~~p~---~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 304 GTR----------MRAPD---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp TCC----------CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred CCC----------CCCCc---cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 111 11111 12345789999999999999999999999999986543
No 26
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6.1e-46 Score=441.79 Aligned_cols=401 Identities=21% Similarity=0.192 Sum_probs=341.5
Q ss_pred EEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCccc--------------ceeecC
Q 002826 76 TVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLI--------------WVLDLS 141 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l--------------~~LdL~ 141 (876)
.+..++++++.+++..|..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+ ++|+|+
T Consensus 57 ~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 136 (606)
T 3vq2_A 57 ELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVA 136 (606)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECC
T ss_pred cCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCC
Confidence 577899999999998899999999999999999999999999999999999999999974 579999
Q ss_pred Cccccc-cCCCccCCccccceecccccccCCCcCccccCCCcce----EEEccCCCCcCCCCCCc---------------
Q 002826 142 RNHIEG-KIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELV----VLDLSQNAYLISEIPSD--------------- 201 (876)
Q Consensus 142 ~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~Ls~N~~~~~~~p~~--------------- 201 (876)
+|.+++ .+|..|+++++|++|+|++|++++..|..|+.+++|+ +|++++|+ +..+|..
T Consensus 137 ~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~--l~~~~~~~~~~~~L~~L~L~~n 214 (606)
T 3vq2_A 137 HNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNP--IDFIQDQAFQGIKLHELTLRGN 214 (606)
T ss_dssp SSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCC--CCEECTTTTTTCEEEEEEEESC
T ss_pred CCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCC--cceeCcccccCceeeeeeccCC
Confidence 999986 6799999999999999999999988888777666554 56666665 3334433
Q ss_pred ------------------------------------------------------------------ccccCcccEEEecC
Q 002826 202 ------------------------------------------------------------------IGKLEKLEQLFLQS 215 (876)
Q Consensus 202 ------------------------------------------------------------------~~~l~~L~~L~L~~ 215 (876)
+..+++|+.|++++
T Consensus 215 ~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~ 294 (606)
T 3vq2_A 215 FNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAG 294 (606)
T ss_dssp CSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEES
T ss_pred ccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecC
Confidence 23344455555555
Q ss_pred CCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeeccccccc-
Q 002826 216 SGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGS- 294 (876)
Q Consensus 216 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~- 294 (876)
|.+... | .+..+++|++|++++|+++ .+|. + .+++|++|++++|+..+.. .+..+++|++|++++|.+++.
T Consensus 295 ~~~~~l-~-~l~~~~~L~~L~l~~n~l~-~lp~-~--~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~ 366 (606)
T 3vq2_A 295 VSIKYL-E-DVPKHFKWQSLSIIRCQLK-QFPT-L--DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSG 366 (606)
T ss_dssp CCCCCC-C-CCCTTCCCSEEEEESCCCS-SCCC-C--CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEE
T ss_pred ccchhh-h-hccccccCCEEEcccccCc-cccc-C--CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCc
Confidence 555432 3 5666677777777777774 7773 3 5778888888888554333 567889999999999999877
Q ss_pred -CCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCc-cccccCCCCCeeeccCcccCCCCCCccc
Q 002826 295 -IPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIP-DSISMAAQLEQVQIDNNRFTSSIPQGLG 372 (876)
Q Consensus 295 -~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 372 (876)
.|..+..+++|++|++++|.+++ +|..+.++++|+.|++++|++++..| ..+..+++|++|++++|++++..|..+.
T Consensus 367 ~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 445 (606)
T 3vq2_A 367 CCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFL 445 (606)
T ss_dssp ECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred chhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhc
Confidence 37889999999999999999985 66899999999999999999999888 7899999999999999999999999999
Q ss_pred cccCccEEeCCCccccC-CCCCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcce
Q 002826 373 SVKSLYRFSASQNSFYG-SLPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTY 450 (876)
Q Consensus 373 ~l~~L~~L~ls~N~l~~-~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 450 (876)
++++|+.|++++|.+++ .+|..|..+++|+.|+|++|++++.++ .+..+++|++|+|++|++++.+|..|..+++|++
T Consensus 446 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 525 (606)
T 3vq2_A 446 GLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLST 525 (606)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCE
T ss_pred CCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCE
Confidence 99999999999999998 579999999999999999999999877 7999999999999999999999999999999999
Q ss_pred eeCCCCcccccCCCccccc--ccceEEccCCccccccCCc
Q 002826 451 LDLSDNNLTGPIPQGLQNL--KLALFNVSFNKLSGRVPYS 488 (876)
Q Consensus 451 L~Ls~N~l~~~~p~~~~~l--~l~~l~ls~N~l~~~~p~~ 488 (876)
|||++|+|+ .+|..+..+ .++.+++++|++.+..|..
T Consensus 526 L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 526 LDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp EECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred EECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 999999999 677778877 3899999999999877743
No 27
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-45 Score=453.58 Aligned_cols=417 Identities=20% Similarity=0.203 Sum_probs=356.4
Q ss_pred CCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcc---------------cceeecCCccccc
Q 002826 83 QSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNL---------------IWVLDLSRNHIEG 147 (876)
Q Consensus 83 ~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~---------------l~~LdL~~n~l~~ 147 (876)
.+++++. +|. -.++|++|||++|.+++..|..|+++++|++|+|++|. |++|+|++|++++
T Consensus 12 s~~~L~~-vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~ 87 (844)
T 3j0a_A 12 RFCNLTQ-VPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYF 87 (844)
T ss_dssp SCCCSSC-CCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCE
T ss_pred cCCCCCC-CCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcc
Confidence 3445553 344 45899999999999999999999999999999999992 5789999999999
Q ss_pred cCCCccCCccccceecccccccCCCcCcc--ccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCcc
Q 002826 148 KIPESIGSLVNLQVLNLGSNLLSGSVPFV--FGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDS 225 (876)
Q Consensus 148 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~ 225 (876)
..|..|+++++|++|+|++|++++..|.. |+++++|++|+|++|.+.....+..|+++++|++|+|++|++++..+..
T Consensus 88 ~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~ 167 (844)
T 3j0a_A 88 LHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHE 167 (844)
T ss_dssp ECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGG
T ss_pred cCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHH
Confidence 99999999999999999999999866655 9999999999999998432223457999999999999999999999999
Q ss_pred ccCC--CCCcEEecccCccCCCCCCccccccc------cccEEEeccccccCcCCccccc--------------------
Q 002826 226 FVGL--QSLSILDLSQNNLTGEVPQSLGSSLL------KLVSFDVSQNKLSGSFPNGICK-------------------- 277 (876)
Q Consensus 226 ~~~l--~~L~~L~Ls~N~l~~~ip~~~~~~l~------~L~~L~L~~N~l~~~~~~~~~~-------------------- 277 (876)
|..+ ++|+.|+|++|.+++..|..+.. ++ +|++|++++|++++..+..+..
T Consensus 168 l~~l~~~~L~~L~L~~n~l~~~~~~~~~~-~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~ 246 (844)
T 3j0a_A 168 LEPLQGKTLSFFSLAANSLYSRVSVDWGK-CMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAG 246 (844)
T ss_dssp GHHHHHCSSCCCEECCSBSCCCCCCCCCS-SSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCS
T ss_pred cccccCCccceEECCCCccccccccchhh-cCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccc
Confidence 9988 89999999999999877776533 33 4999999999888766655543
Q ss_pred ------------------CCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcc
Q 002826 278 ------------------ANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRF 339 (876)
Q Consensus 278 ------------------l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 339 (876)
.++|+.|+|++|.+.+..+..|..+++|+.|+|++|++++..|..|.++++|++|++++|++
T Consensus 247 ~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l 326 (844)
T 3j0a_A 247 FGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLL 326 (844)
T ss_dssp SSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCC
T ss_pred ccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCC
Confidence 26899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCC------------------C--------
Q 002826 340 SGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLP------------------P-------- 393 (876)
Q Consensus 340 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~------------------~-------- 393 (876)
++..|..|..+++|++|++++|++++..+..|.++++|+.|++++|.+++... .
T Consensus 327 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L 406 (844)
T 3j0a_A 327 GELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLI 406 (844)
T ss_dssp SCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEE
T ss_pred CccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCccccccccccccee
Confidence 99999999999999999999999998888889999999999999999875321 1
Q ss_pred --------------CcCCCCCccEEEccCCccccCCc--CcccccccceEeccCCcCC-----CCCCcCCCCCCCcceee
Q 002826 394 --------------NFCDSPVMSIINLSQNSISGQIP--ELKKCRKLVSLSLADNSLT-----GEIPPSLAELPVLTYLD 452 (876)
Q Consensus 394 --------------~~~~~~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~ 452 (876)
.+..+++|+.|+|++|++++..+ .+..+++|+.|+|++|.++ +..|..|.++++|+.|+
T Consensus 407 ~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~ 486 (844)
T 3j0a_A 407 HLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLY 486 (844)
T ss_dssp ECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCC
T ss_pred ecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEE
Confidence 12356778888888888876554 3566788888888888886 45567799999999999
Q ss_pred CCCCcccccCCCccccc-ccceEEccCCccccccCCcccCCCCCccccCCCCC
Q 002826 453 LSDNNLTGPIPQGLQNL-KLALFNVSFNKLSGRVPYSLISGLPASYLQGNPGL 504 (876)
Q Consensus 453 Ls~N~l~~~~p~~~~~l-~l~~l~ls~N~l~~~~p~~~~~~~~~~~~~~N~~~ 504 (876)
|++|+|++..|..+..+ .++.|++++|++++..|..+..++..+.+++|.-.
T Consensus 487 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~ 539 (844)
T 3j0a_A 487 LNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLL 539 (844)
T ss_dssp CCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCC
T ss_pred CCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCC
Confidence 99999999888888887 59999999999998666665677788888887643
No 28
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.6e-46 Score=450.03 Aligned_cols=395 Identities=17% Similarity=0.250 Sum_probs=346.9
Q ss_pred CCCCeeecCCCccccccCccccCCCCCCcccC-CCcccc-----------------------------------------
Q 002826 99 SSLSNLNLADNLFNQPIPLHLSQCSSLETLNL-SNNLIW----------------------------------------- 136 (876)
Q Consensus 99 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-s~N~l~----------------------------------------- 136 (876)
.+++.|+|++|++.|.+|.+|++|++|++|+| ++|.+.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 777531
Q ss_pred ------------------------eeec--CCccccccCCCccCCccccceecccccccCC-----------------Cc
Q 002826 137 ------------------------VLDL--SRNHIEGKIPESIGSLVNLQVLNLGSNLLSG-----------------SV 173 (876)
Q Consensus 137 ------------------------~LdL--~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~ 173 (876)
.+.+ ..|++++ +|..|+++++|++|+|++|+|++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 0111 3488888 89999999999999999999998 38
Q ss_pred Ccccc--CCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCC-Ccc-cCCccccCCC-------CCcEEecccCcc
Q 002826 174 PFVFG--NFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSG-FHG-VIPDSFVGLQ-------SLSILDLSQNNL 242 (876)
Q Consensus 174 p~~~~--~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l~-------~L~~L~Ls~N~l 242 (876)
|..++ ++++|++|+|++|+ ..+.+|..|.++++|++|+|++|+ +++ .+|..+..++ +|++|+|++|++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~-l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCP-NMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCT-TCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred ChhhhhccCCCCCEEECcCCC-CCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 88877 99999999999998 478899999999999999999998 998 7888776665 999999999999
Q ss_pred CCCCCC--ccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccc-cceeecccccCCCCC
Q 002826 243 TGEVPQ--SLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLN-LERFQVQDNGFSGDF 319 (876)
Q Consensus 243 ~~~ip~--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~-L~~L~L~~N~l~~~~ 319 (876)
+ .+|. .+ ..+++|+.|+|++|+++ .+| .|..+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|+++ .+
T Consensus 561 ~-~ip~~~~l-~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~l 634 (876)
T 4ecn_A 561 E-EFPASASL-QKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YI 634 (876)
T ss_dssp C-BCCCHHHH-TTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SC
T ss_pred C-ccCChhhh-hcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cC
Confidence 9 8998 55 46999999999999999 778 8999999999999999999 88989999999 999999999999 78
Q ss_pred CcccCCCCc--ccEEEecCCcccccCcccc---c--cCCCCCeeeccCcccCCCCCCcc-ccccCccEEeCCCccccCCC
Q 002826 320 PDKLWSLPR--IKLIRAESNRFSGAIPDSI---S--MAAQLEQVQIDNNRFTSSIPQGL-GSVKSLYRFSASQNSFYGSL 391 (876)
Q Consensus 320 p~~~~~l~~--L~~L~L~~N~l~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~~ 391 (876)
|..+..++. |+.|++++|++++.+|... . .+.+|+.|+|++|+++ .+|..+ ..+++|+.|+|++|+++...
T Consensus 635 p~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip 713 (876)
T 4ecn_A 635 PNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIP 713 (876)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCC
T ss_pred chhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccC
Confidence 888887754 9999999999998776533 2 3458999999999999 566554 58999999999999999444
Q ss_pred CCCcCCC-------CCccEEEccCCccccCCcCcc--cccccceEeccCCcCCCCCCcCCCCCCCcceeeCCC------C
Q 002826 392 PPNFCDS-------PVMSIINLSQNSISGQIPELK--KCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSD------N 456 (876)
Q Consensus 392 ~~~~~~~-------~~L~~L~Ls~N~l~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N 456 (876)
+..+... ++|+.|+|++|+|+..+..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |
T Consensus 714 ~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N 792 (876)
T 4ecn_A 714 ENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGN 792 (876)
T ss_dssp TTSSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCC
T ss_pred hHHhccccccccccCCccEEECCCCCCccchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccc
Confidence 4444433 289999999999996666776 99999999999999997 798999999999999976 8
Q ss_pred cccccCCCccccc-ccceEEccCCccccccCCcccCCCCCccccCCCCC
Q 002826 457 NLTGPIPQGLQNL-KLALFNVSFNKLSGRVPYSLISGLPASYLQGNPGL 504 (876)
Q Consensus 457 ~l~~~~p~~~~~l-~l~~l~ls~N~l~~~~p~~~~~~~~~~~~~~N~~~ 504 (876)
++.+.+|..+..+ +|+.|++++|++ +.+|..+..++..+.+.+||+.
T Consensus 793 ~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 793 RILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNI 840 (876)
T ss_dssp BCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTC
T ss_pred cccccChHHHhcCCCCCEEECCCCCC-CccCHhhcCCCCEEECCCCCCC
Confidence 8999999999988 599999999999 8999888888899999999864
No 29
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1e-44 Score=437.21 Aligned_cols=410 Identities=19% Similarity=0.210 Sum_probs=269.8
Q ss_pred EEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCccc----------------ceee
Q 002826 76 TVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLI----------------WVLD 139 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l----------------~~Ld 139 (876)
.+..+++.++.+++..+..++++++|++|+|++|.+++..|..|+++++|++|+|++|.+ +.|+
T Consensus 98 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 177 (680)
T 1ziw_A 98 NLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLE 177 (680)
T ss_dssp TCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEE
T ss_pred CCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEE
Confidence 345566666666665556677777777777777777776677777777777777776642 4567
Q ss_pred cCCccccccCCCccCCc---------------------------cccceecccccccCCCcCccccCCCc--ceEEEccC
Q 002826 140 LSRNHIEGKIPESIGSL---------------------------VNLQVLNLGSNLLSGSVPFVFGNFSE--LVVLDLSQ 190 (876)
Q Consensus 140 L~~n~l~~~~p~~~~~l---------------------------~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~ 190 (876)
+++|++++..|..|..+ ++|+.|+|++|++++..|..|.+++. |++|+|++
T Consensus 178 L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~ 257 (680)
T 1ziw_A 178 LSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSY 257 (680)
T ss_dssp CTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTT
T ss_pred CCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCC
Confidence 77777666655544332 22333334444444444444444332 44444444
Q ss_pred CCCcCCCCCCcccccCcccEEEecCCCCcccCCccccC---------------------------------CCCCcEEec
Q 002826 191 NAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVG---------------------------------LQSLSILDL 237 (876)
Q Consensus 191 N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~---------------------------------l~~L~~L~L 237 (876)
|++ .+..|..|..+++|++|+|++|++.+..|..|.+ +++|++|++
T Consensus 258 n~l-~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l 336 (680)
T 1ziw_A 258 NNL-NVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNM 336 (680)
T ss_dssp SCC-CEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEEC
T ss_pred CCc-CccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEEC
Confidence 441 1222333444444444444444444444333333 333333333
Q ss_pred ccCccCCCCCCccccccc----------------------------cccEEEeccccccCcCCcccccCCccceeeeecc
Q 002826 238 SQNNLTGEVPQSLGSSLL----------------------------KLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKN 289 (876)
Q Consensus 238 s~N~l~~~ip~~~~~~l~----------------------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 289 (876)
++|++++ ++...+..++ +|+.|++++|++++..|..|..+++|++|+|++|
T Consensus 337 ~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 415 (680)
T 1ziw_A 337 EDNDIPG-IKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLN 415 (680)
T ss_dssp CSCCBCC-CCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCccCC-CChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCC
Confidence 3333332 1111112222 3444444445555555555555666666666666
Q ss_pred cccccCC-CCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCccc--ccCccccccCCCCCeeeccCcccCCC
Q 002826 290 FFNGSIP-GSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFS--GAIPDSISMAAQLEQVQIDNNRFTSS 366 (876)
Q Consensus 290 ~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~ 366 (876)
.+++.+| ..|.++++|++|++++|++++..+..|..+++|+.|++++|.++ +..|..|..+++|++|++++|++++.
T Consensus 416 ~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i 495 (680)
T 1ziw_A 416 EIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANI 495 (680)
T ss_dssp CCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCC
T ss_pred cCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcC
Confidence 6654443 34555666666666666666555666666666666666666665 45778889999999999999999988
Q ss_pred CCCccccccCccEEeCCCccccCCC--------CCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCCcCCCC
Q 002826 367 IPQGLGSVKSLYRFSASQNSFYGSL--------PPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGE 437 (876)
Q Consensus 367 ~p~~~~~l~~L~~L~ls~N~l~~~~--------~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~ 437 (876)
.|..|.++++|++|++++|++++.. +..|.++++|++|+|++|+++..++ .|.++++|++|+|++|+|++.
T Consensus 496 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l 575 (680)
T 1ziw_A 496 NDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTL 575 (680)
T ss_dssp CTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred ChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcC
Confidence 8888999999999999999998753 2348899999999999999997776 699999999999999999988
Q ss_pred CCcCCCCCCCcceeeCCCCcccccCCCccc-cc-ccceEEccCCccccccCC
Q 002826 438 IPPSLAELPVLTYLDLSDNNLTGPIPQGLQ-NL-KLALFNVSFNKLSGRVPY 487 (876)
Q Consensus 438 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l-~l~~l~ls~N~l~~~~p~ 487 (876)
.+..|..+++|+.|+|++|+|++..|..+. .+ +++.+++++|++.+..+.
T Consensus 576 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 576 PASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 888899999999999999999987777665 44 688999999999987763
No 30
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=5.3e-47 Score=403.09 Aligned_cols=245 Identities=25% Similarity=0.299 Sum_probs=190.2
Q ss_pred ccccCCCCCCCCceEEEEEEe----CCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSL----PSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 656 (876)
|.-...+|.|| ||+||+|+. .+++.||+|++.+... .....+.+|++++++++|||||++++++.+++..|+|
T Consensus 26 Y~i~~~lG~G~-fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 104 (304)
T 3ubd_A 26 FELLKVLGQGS-FGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI 104 (304)
T ss_dssp EEEEEEEECGG-GCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred cEEEEEEecCC-CeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 44445555555 999999965 2578999999965321 2334688899999999999999999999999999999
Q ss_pred EEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccc
Q 002826 657 YEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 736 (876)
||||+||+|.+++.+.+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 105 mEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 105 LDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp ECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 99999999999998765 799999999999999999999999 99999999999999999999999999998654322
Q ss_pred cccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhh
Q 002826 737 FQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKI 816 (876)
Q Consensus 737 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 816 (876)
.......||+.|||||++.+..++.++||||+||++|||+||+.||....... ....+. ......
T Consensus 181 --~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~--~~~~i~---~~~~~~-------- 245 (304)
T 3ubd_A 181 --KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE--TMTMIL---KAKLGM-------- 245 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH---HCCCCC--------
T ss_pred --ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH--HHHHHH---cCCCCC--------
Confidence 12334569999999999999999999999999999999999999998654332 122111 111001
Q ss_pred hhhcHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 002826 817 ANCYQQQMLGALEIALRCTSVMPEKRPSM-----FEVVK 850 (876)
Q Consensus 817 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~-----~ell~ 850 (876)
+ ...+.++.+++.+||+.||++|||+ +|+++
T Consensus 246 p---~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 246 P---QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp C---TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred C---CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 1 1123457899999999999999985 56654
No 31
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.5e-45 Score=392.22 Aligned_cols=248 Identities=21% Similarity=0.345 Sum_probs=185.4
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCC--------
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDE-------- 651 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 651 (876)
+|.....+|.|| ||+||+|+. .+|+.||||++..... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 6 dy~~~~~lG~G~-fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 6 DFEPIQCLGRGG-FGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HEEEEEEEEECC---EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hCEEeeEEecCC-CeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 455566677766 999999976 4799999999975432 23467889999999999999999999987644
Q ss_pred ----eEEEEEEcCCCCCHHHHhhccC--CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEcc
Q 002826 652 ----SIFLIYEFLQMGSLGDLICRQD--FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTD 725 (876)
Q Consensus 652 ----~~~lv~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~D 725 (876)
..|+|||||++|+|.+++.+.. ...++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 3799999999999999997653 2356777899999999999999999 999999999999999999999999
Q ss_pred ccchhhccccccc----------cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHH
Q 002826 726 FALDRIVGEAAFQ----------STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVV 795 (876)
Q Consensus 726 fGla~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~ 795 (876)
||+|+........ ...+..+||+.|||||++.+..++.++||||+||++|||++ ||.... +..
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~----~~~ 234 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM----ERV 234 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----HHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----HHH
Confidence 9999887543211 12234569999999999999999999999999999999996 665321 111
Q ss_pred HHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 796 KWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 796 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
......... ...+. .........+++.+||++||++|||+.|+++
T Consensus 235 ~~~~~~~~~------~~p~~----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 RTLTDVRNL------KFPPL----FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHTT------CCCHH----HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHhcC------CCCCC----CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111111 11121 2233345678999999999999999999987
No 32
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-44 Score=423.57 Aligned_cols=401 Identities=20% Similarity=0.233 Sum_probs=354.4
Q ss_pred EEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCccc--------------ceeecC
Q 002826 76 TVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLI--------------WVLDLS 141 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l--------------~~LdL~ 141 (876)
.+..+++.++++++..+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+ ++|+|+
T Consensus 53 ~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 132 (570)
T 2z63_A 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 132 (570)
T ss_dssp SCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECC
T ss_pred CceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecC
Confidence 567899999999998888999999999999999999999999999999999999999854 578999
Q ss_pred Cccccc-cCCCccCCccccceecccccccCCCcCccccCCCcc----eEEEccCCCCcCCCCC-CcccccCcccEEEecC
Q 002826 142 RNHIEG-KIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSEL----VVLDLSQNAYLISEIP-SDIGKLEKLEQLFLQS 215 (876)
Q Consensus 142 ~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~Ls~N~~~~~~~p-~~~~~l~~L~~L~L~~ 215 (876)
+|.+++ .+|..|+++++|++|++++|++++..|..|+.+++| +.|++++|. +..++ ..+... +|+.|++++
T Consensus 133 ~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~--l~~~~~~~~~~~-~L~~L~l~~ 209 (570)
T 2z63_A 133 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP--MNFIQPGAFKEI-RLHKLTLRN 209 (570)
T ss_dssp SSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC--CCEECTTTTTTC-EEEEEEEES
T ss_pred CCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC--ceecCHHHhccC-cceeEeccc
Confidence 999987 468889999999999999999988888888888888 889999997 34444 334433 677777777
Q ss_pred C----------------------------------------------------------CCcccCCccccCCCCCcEEec
Q 002826 216 S----------------------------------------------------------GFHGVIPDSFVGLQSLSILDL 237 (876)
Q Consensus 216 n----------------------------------------------------------~l~~~~~~~~~~l~~L~~L~L 237 (876)
| .+.+..|..|..+++|++|++
T Consensus 210 n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l 289 (570)
T 2z63_A 210 NFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSL 289 (570)
T ss_dssp CCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEE
T ss_pred ccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEe
Confidence 6 344556778888999999999
Q ss_pred ccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCC
Q 002826 238 SQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSG 317 (876)
Q Consensus 238 s~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 317 (876)
++|.++ .+|..+.. + +|++|++++|++. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++
T Consensus 290 ~~~~l~-~l~~~~~~-~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~ 361 (570)
T 2z63_A 290 VSVTIE-RVKDFSYN-F-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSF 361 (570)
T ss_dssp ESCEEC-SCCBCCSC-C-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBE
T ss_pred cCccch-hhhhhhcc-C-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCc
Confidence 999999 78888764 6 9999999999998 5555 4789999999999999877665 789999999999999986
Q ss_pred CC--CcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCC-CccccccCccEEeCCCccccCCCCCC
Q 002826 318 DF--PDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIP-QGLGSVKSLYRFSASQNSFYGSLPPN 394 (876)
Q Consensus 318 ~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~~~~ 394 (876)
.. |..+.++++|++|++++|++++..+. +..+++|++|++++|++++..| ..+.++++|+.|++++|.+.+..|..
T Consensus 362 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 440 (570)
T 2z63_A 362 KGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI 440 (570)
T ss_dssp EEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTT
T ss_pred cccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhh
Confidence 65 78899999999999999999977666 9999999999999999998776 57899999999999999999999999
Q ss_pred cCCCCCccEEEccCCccc-cCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccc-cc
Q 002826 395 FCDSPVMSIINLSQNSIS-GQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL-KL 471 (876)
Q Consensus 395 ~~~~~~L~~L~Ls~N~l~-~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l 471 (876)
|.++++|+.|++++|+++ +.+| .+..+++|++|+|++|++++..|..|..+++|++|++++|++++..|..+..+ ++
T Consensus 441 ~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 520 (570)
T 2z63_A 441 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSL 520 (570)
T ss_dssp TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred hhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCC
Confidence 999999999999999998 4455 89999999999999999999999999999999999999999999888888887 59
Q ss_pred ceEEccCCccccccCCc
Q 002826 472 ALFNVSFNKLSGRVPYS 488 (876)
Q Consensus 472 ~~l~ls~N~l~~~~p~~ 488 (876)
+.|++++|+++|.+|..
T Consensus 521 ~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 521 QKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp CEEECCSSCBCCCTTTT
T ss_pred cEEEecCCcccCCCcch
Confidence 99999999999998853
No 33
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5e-45 Score=425.58 Aligned_cols=407 Identities=21% Similarity=0.253 Sum_probs=297.8
Q ss_pred EEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCC
Q 002826 76 TVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGS 155 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~ 155 (876)
.+..++++++.+++..|..+..+++|++|+|++|++++..|..|+++++|++|+|++|+| + .+|.. .
T Consensus 22 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l----------~-~lp~~--~ 88 (520)
T 2z7x_B 22 KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKL----------V-KISCH--P 88 (520)
T ss_dssp TCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCC----------C-EEECC--C
T ss_pred cccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCce----------e-ecCcc--c
Confidence 455667777777666666677777777777777777776677777777777665554443 3 33444 6
Q ss_pred ccccceecccccccCC-CcCccccCCCcceEEEccCCCCcCCCCCCcccccCcc--cEEEecCCCC--cccCCccccCCC
Q 002826 156 LVNLQVLNLGSNLLSG-SVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKL--EQLFLQSSGF--HGVIPDSFVGLQ 230 (876)
Q Consensus 156 l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L--~~L~L~~n~l--~~~~~~~~~~l~ 230 (876)
+++|++|+|++|++++ .+|..|+++++|++|+|++|++ .. ..+..+++| ++|++++|++ .+..|..|..+.
T Consensus 89 l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l--~~--~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 89 TVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHL--EK--SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp CCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSC--CG--GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred cCCccEEeccCCccccccchhhhccCCcceEEEecCccc--ch--hhccccccceeeEEEeecccccccccccccccccc
Confidence 7788888888888876 3677888888888888888873 22 356677777 8888888888 667777766654
Q ss_pred -CCcEEecccCccCCCCCCccccccccccEEEecccc-------ccCcCCcccccCC-----------------------
Q 002826 231 -SLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNK-------LSGSFPNGICKAN----------------------- 279 (876)
Q Consensus 231 -~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~-------l~~~~~~~~~~l~----------------------- 279 (876)
+...+++++|++.+.++...+..+++|+.|++++|+ +.+.+| .+..++
T Consensus 165 ~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~ 243 (520)
T 2z7x_B 165 TESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQL 243 (520)
T ss_dssp EEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHH
T ss_pred cceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHH
Confidence 233456666666666666555667777777777775 443333 344444
Q ss_pred ----ccceeeeecccccccCCCCC-----ccccccceeecccccCCCCCC-cccCCC---CcccEEEecCCcccccCccc
Q 002826 280 ----GLVNLSLHKNFFNGSIPGSI-----NECLNLERFQVQDNGFSGDFP-DKLWSL---PRIKLIRAESNRFSGAIPDS 346 (876)
Q Consensus 280 ----~L~~L~L~~N~i~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~~~~ 346 (876)
+|++|++++|++++.+|..+ ..+++|+.+++++|.+ .+| ..+..+ ++|+.|++++|.+.+.. .
T Consensus 244 ~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~ 319 (520)
T 2z7x_B 244 VWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--C 319 (520)
T ss_dssp HHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--C
T ss_pred hhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--c
Confidence 55566666666665666655 6666666666666666 233 333333 45666677776665322 1
Q ss_pred cccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccC--CCCCCcCCCCCccEEEccCCccccCCc--Cccccc
Q 002826 347 ISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYG--SLPPNFCDSPVMSIINLSQNSISGQIP--ELKKCR 422 (876)
Q Consensus 347 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~--~~~~~~~~~~~L~~L~Ls~N~l~~~~~--~~~~l~ 422 (876)
+..+++|++|++++|++++.+|..++++++|+.|++++|++++ .+|..|..+++|++|++++|++++.+| .+..++
T Consensus 320 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 399 (520)
T 2z7x_B 320 PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTK 399 (520)
T ss_dssp CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCT
T ss_pred hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCc
Confidence 2678899999999999999899999999999999999999987 556789999999999999999998444 488999
Q ss_pred ccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccc-ccceEEccCCccccccCCcc---cCCCCCccc
Q 002826 423 KLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL-KLALFNVSFNKLSGRVPYSL---ISGLPASYL 498 (876)
Q Consensus 423 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~ls~N~l~~~~p~~~---~~~~~~~~~ 498 (876)
+|++|+|++|++++..|..+. ++|+.|||++|+++ .+|..+..+ +++.|++++|+++ .+|... +.++..+++
T Consensus 400 ~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 475 (520)
T 2z7x_B 400 SLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWL 475 (520)
T ss_dssp TCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred cCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEEC
Confidence 999999999999988887775 79999999999999 788877776 6999999999998 577553 556777899
Q ss_pred cCCCCCCCCC
Q 002826 499 QGNPGLCGPG 508 (876)
Q Consensus 499 ~~N~~~C~~~ 508 (876)
.+||+.|+|+
T Consensus 476 ~~N~~~c~c~ 485 (520)
T 2z7x_B 476 HTNPWDCSCP 485 (520)
T ss_dssp CSSCBCCCHH
T ss_pred cCCCCcccCC
Confidence 9999999875
No 34
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.2e-43 Score=422.05 Aligned_cols=431 Identities=19% Similarity=0.187 Sum_probs=330.8
Q ss_pred ceEecCCCC------CccEEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccce
Q 002826 64 GVTCVTTAT------ASLTVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWV 137 (876)
Q Consensus 64 gv~c~~~~~------~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 137 (876)
.|.|...+. .+..++.++|++|+|++..+.+|.++++|++|+|++|+|+++.|.+|++|++|++|+|++|
T Consensus 35 ~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N---- 110 (635)
T 4g8a_A 35 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN---- 110 (635)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC----
T ss_pred EEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCC----
Confidence 466764332 1235788999999999888889999999999999999999988899999999998866554
Q ss_pred eecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCC
Q 002826 138 LDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSG 217 (876)
Q Consensus 138 LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~ 217 (876)
+|++..+..|.++++|++|+|++|+|++..+..|+++++|++|+|++|.+....+|..+..+++|++|+|++|+
T Consensus 111 ------~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 184 (635)
T 4g8a_A 111 ------PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 184 (635)
T ss_dssp ------CCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred ------cCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcc
Confidence 55566677899999999999999999988888899999999999999985445667888999999999999999
Q ss_pred CcccCCccccCCCCCc----EEecccCccCCCCCCccccccccccEEEecccc---------------------------
Q 002826 218 FHGVIPDSFVGLQSLS----ILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNK--------------------------- 266 (876)
Q Consensus 218 l~~~~~~~~~~l~~L~----~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~--------------------------- 266 (876)
++++.+..|..+.+++ .++++.|.++ .++...+. ...+..+++.+|.
T Consensus 185 l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~-~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~ 262 (635)
T 4g8a_A 185 IQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFR 262 (635)
T ss_dssp CCEECGGGGHHHHTCTTCCCEEECTTCCCC-EECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCT
T ss_pred ccccccccccchhhhhhhhhhhhcccCccc-ccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccc
Confidence 9988888887766544 5777888776 44443332 2233344444332
Q ss_pred -------------------------------------------------------ccCcCCcccccCCccceeeeecccc
Q 002826 267 -------------------------------------------------------LSGSFPNGICKANGLVNLSLHKNFF 291 (876)
Q Consensus 267 -------------------------------------------------------l~~~~~~~~~~l~~L~~L~L~~N~i 291 (876)
+... ..+....+|+.|++++|.+
T Consensus 263 ~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~ 340 (635)
T 4g8a_A 263 NEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKF 340 (635)
T ss_dssp TSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEE
T ss_pred cccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccc
Confidence 1111 1122334455566666655
Q ss_pred cccCCC-------------------CCccccccceeecccccCCC--CCCcccCCCCcccEEEecCCcccccCccccccC
Q 002826 292 NGSIPG-------------------SINECLNLERFQVQDNGFSG--DFPDKLWSLPRIKLIRAESNRFSGAIPDSISMA 350 (876)
Q Consensus 292 ~~~~~~-------------------~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 350 (876)
.+..+. .+..+++|+.|++++|.+.. ..+..+..+.+|+.+++..|.+.. .+..+..+
T Consensus 341 ~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l 419 (635)
T 4g8a_A 341 GQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGL 419 (635)
T ss_dssp SSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTC
T ss_pred cCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-cccccccc
Confidence 433222 12345566666666666542 334445556666666666666653 34556778
Q ss_pred CCCCeeeccCcccCCCCC-CccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCcccc-CCc-CcccccccceE
Q 002826 351 AQLEQVQIDNNRFTSSIP-QGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISG-QIP-ELKKCRKLVSL 427 (876)
Q Consensus 351 ~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~-~~~-~~~~l~~L~~L 427 (876)
++|+.+++++|+.....+ ..+..+++++.++++.|.+.+..+..+..++.|+.|+|++|++.. .+| .|..+++|++|
T Consensus 420 ~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L 499 (635)
T 4g8a_A 420 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 499 (635)
T ss_dssp TTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred ccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEE
Confidence 889999998887775554 457889999999999999999999999999999999999998654 455 79999999999
Q ss_pred eccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccc-ccceEEccCCccccccCCcc---cCCCCCccccCCCC
Q 002826 428 SLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL-KLALFNVSFNKLSGRVPYSL---ISGLPASYLQGNPG 503 (876)
Q Consensus 428 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~ls~N~l~~~~p~~~---~~~~~~~~~~~N~~ 503 (876)
+|++|+|++.+|..|.++++|++|+|++|+|++..|..+..+ +|+.||+++|++++..|..+ ..++..+.+.+|||
T Consensus 500 ~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~ 579 (635)
T 4g8a_A 500 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579 (635)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCB
T ss_pred ECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCC
Confidence 999999999999999999999999999999999888889888 59999999999998888654 35678889999999
Q ss_pred CCCCCC
Q 002826 504 LCGPGL 509 (876)
Q Consensus 504 ~C~~~~ 509 (876)
.|+|.+
T Consensus 580 ~C~C~~ 585 (635)
T 4g8a_A 580 ACTCEH 585 (635)
T ss_dssp CCSGGG
T ss_pred cccCCc
Confidence 999863
No 35
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.9e-43 Score=403.51 Aligned_cols=362 Identities=19% Similarity=0.201 Sum_probs=242.3
Q ss_pred CCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccC-CCccCCccccceecccccccCCCcCccc
Q 002826 99 SSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKI-PESIGSLVNLQVLNLGSNLLSGSVPFVF 177 (876)
Q Consensus 99 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 177 (876)
++|++|+|++|.+++..|..|+++++|++|+|++| .+.+.+ |..|.++++|++|+|++|++++..|..|
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n----------~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 99 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQ----------TPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAF 99 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCC----------STTCEECTTTTTTCTTCCEEECTTCTTCEECTTTT
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCC----------cccceECcccccccccCCEEeCCCCccCccChhhc
Confidence 67889999999998888888888888887765554 444333 5678888889999999998888888888
Q ss_pred cCCCcceEEEccCCCCcCCCCCCc--ccccCcccEEEecCCCCcccCCcc-ccCCCCCcEEecccCccCCCCCCcccccc
Q 002826 178 GNFSELVVLDLSQNAYLISEIPSD--IGKLEKLEQLFLQSSGFHGVIPDS-FVGLQSLSILDLSQNNLTGEVPQSLGSSL 254 (876)
Q Consensus 178 ~~l~~L~~L~Ls~N~~~~~~~p~~--~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l 254 (876)
+++++|++|+|++|++ .+.+|.. |..+++|++|+|++|++++..|.. |.++++|++|+|++|++++..|..+. .+
T Consensus 100 ~~l~~L~~L~L~~n~l-~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~-~l 177 (455)
T 3v47_A 100 NGLANLEVLTLTQCNL-DGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLL-NF 177 (455)
T ss_dssp TTCTTCCEEECTTSCC-BTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSG-GG
T ss_pred cCcccCCEEeCCCCCC-CccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhh-cc
Confidence 8888888888888873 2323333 778888888888888888877766 77888888888888888865555543 24
Q ss_pred --ccccEEEeccccccCcCCccc--------ccCCccceeeeecccccccCCCCCccc---cccceeecccccCCCCCCc
Q 002826 255 --LKLVSFDVSQNKLSGSFPNGI--------CKANGLVNLSLHKNFFNGSIPGSINEC---LNLERFQVQDNGFSGDFPD 321 (876)
Q Consensus 255 --~~L~~L~L~~N~l~~~~~~~~--------~~l~~L~~L~L~~N~i~~~~~~~~~~l---~~L~~L~L~~N~l~~~~p~ 321 (876)
.+|+.|++++|.+.+..+..+ ..+++|++|++++|.+++..|..+..+ ++|+.|++++|.+.+...
T Consensus 178 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~- 256 (455)
T 3v47_A 178 QGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF- 256 (455)
T ss_dssp TTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT-
T ss_pred ccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc-
Confidence 678888888888876554432 245677777777777776666655544 667777777776543211
Q ss_pred ccCCCCcccEEEecCCcccccCccccccC--CCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCC
Q 002826 322 KLWSLPRIKLIRAESNRFSGAIPDSISMA--AQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSP 399 (876)
Q Consensus 322 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~ 399 (876)
..+.+.+..+..+..+ ++|+.|++++|++++..|..+..+++|++|++++|++++..|..|.+++
T Consensus 257 -------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 323 (455)
T 3v47_A 257 -------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLT 323 (455)
T ss_dssp -------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred -------------chhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcc
Confidence 1111111222222222 4566666666666665666666666666666666666666666666666
Q ss_pred CccEEEccCCccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccc-ccceEEcc
Q 002826 400 VMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL-KLALFNVS 477 (876)
Q Consensus 400 ~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~ls 477 (876)
+|++|+|++|++++.++ .|..+++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..+..+ +++.|+++
T Consensus 324 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 403 (455)
T 3v47_A 324 HLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLH 403 (455)
T ss_dssp TCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred cCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEcc
Confidence 66666666666665544 45666666666666666666666666666666666666666665444445554 36666666
Q ss_pred CCccccccC
Q 002826 478 FNKLSGRVP 486 (876)
Q Consensus 478 ~N~l~~~~p 486 (876)
+|++++.+|
T Consensus 404 ~N~l~~~~~ 412 (455)
T 3v47_A 404 TNPWDCSCP 412 (455)
T ss_dssp SSCBCCCTT
T ss_pred CCCcccCCC
Confidence 666666665
No 36
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.3e-42 Score=408.88 Aligned_cols=403 Identities=22% Similarity=0.255 Sum_probs=254.7
Q ss_pred EeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCc--
Q 002826 79 SINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSL-- 156 (876)
Q Consensus 79 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l-- 156 (876)
.++++++++++ +|..+. ++|++|+|++|.+++..|..|+++++|++|+|++| +|++..|..|.++
T Consensus 35 ~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N----------~l~~~~~~~~~~l~~ 101 (562)
T 3a79_B 35 MVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHN----------RIRSLDFHVFLFNQD 101 (562)
T ss_dssp EEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSC----------CCCEECTTTTTTCTT
T ss_pred EEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCC----------CCCcCCHHHhCCCCC
Confidence 34555555553 444333 55556666666655555555555555555533333 2333334444444
Q ss_pred -------------------cccceecccccccCCC-cCccccCCCcceEEEccCCCCcCCCCCCcccccCcc--cEEEec
Q 002826 157 -------------------VNLQVLNLGSNLLSGS-VPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKL--EQLFLQ 214 (876)
Q Consensus 157 -------------------~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L--~~L~L~ 214 (876)
++|++|+|++|++++. .|..|+++++|++|+|++|++ .. ..+..+++| ++|+++
T Consensus 102 L~~L~Ls~N~l~~lp~~~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l--~~--~~~~~l~~L~L~~L~L~ 177 (562)
T 3a79_B 102 LEYLDVSHNRLQNISCCPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKF--RQ--LDLLPVAHLHLSCILLD 177 (562)
T ss_dssp CCEEECTTSCCCEECSCCCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBC--CT--TTTGGGTTSCEEEEEEE
T ss_pred CCEEECCCCcCCccCccccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcc--cc--CchhhhhhceeeEEEee
Confidence 4555555555555432 234455555555555555542 11 123333333 555555
Q ss_pred CCCC--cccCCccccCCC--CCcEEecccCccCCCCCCccccccccccEEEecccc-----ccCcCCcccccC-------
Q 002826 215 SSGF--HGVIPDSFVGLQ--SLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNK-----LSGSFPNGICKA------- 278 (876)
Q Consensus 215 ~n~l--~~~~~~~~~~l~--~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~-----l~~~~~~~~~~l------- 278 (876)
+|++ ++..|..|..+. .| .+++++|.+.+.++...+..+++|+.|++++|+ +.+. ...+..+
T Consensus 178 ~n~l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~ 255 (562)
T 3a79_B 178 LVSYHIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVT 255 (562)
T ss_dssp ESSCCCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEE
T ss_pred cccccccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEE
Confidence 5554 444444444432 12 334444444444444444456777777777774 1110 1112222
Q ss_pred --------------------CccceeeeecccccccCCCCC-----ccccccceeecccccCCCCCC-cccCC---CCcc
Q 002826 279 --------------------NGLVNLSLHKNFFNGSIPGSI-----NECLNLERFQVQDNGFSGDFP-DKLWS---LPRI 329 (876)
Q Consensus 279 --------------------~~L~~L~L~~N~i~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~---l~~L 329 (876)
++|++|++++|.+++.+|..+ ..+++|+.+++..|.+ .+| ..+.. ..+|
T Consensus 256 L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L 333 (562)
T 3a79_B 256 LQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNI 333 (562)
T ss_dssp EEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCC
T ss_pred ecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcc
Confidence 256666666666666666655 5555555555555555 233 22222 2457
Q ss_pred cEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCC--CCCcCCCCCccEEEcc
Q 002826 330 KLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSL--PPNFCDSPVMSIINLS 407 (876)
Q Consensus 330 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~--~~~~~~~~~L~~L~Ls 407 (876)
+.|++++|.+.... ....+++|++|++++|++++.+|..+.++++|+.|++++|++++.. |..|..+++|+.|+++
T Consensus 334 ~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~ 411 (562)
T 3a79_B 334 KMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVS 411 (562)
T ss_dssp SEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECT
T ss_pred eEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECC
Confidence 78888888775322 1267889999999999999889999999999999999999998743 5678999999999999
Q ss_pred CCccccCCc--CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccc-ccceEEccCCccccc
Q 002826 408 QNSISGQIP--ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL-KLALFNVSFNKLSGR 484 (876)
Q Consensus 408 ~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~ls~N~l~~~ 484 (876)
+|++++.+| .+..+++|++|+|++|++++.+|..+. ++|++|+|++|+|+ .+|..+..+ +++.|++++|+++ .
T Consensus 412 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~ 487 (562)
T 3a79_B 412 LNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-S 487 (562)
T ss_dssp TSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-C
T ss_pred CCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-C
Confidence 999998444 588899999999999999887777665 78999999999999 677766666 5899999999998 5
Q ss_pred cCCcc---cCCCCCccccCCCCCCCCC
Q 002826 485 VPYSL---ISGLPASYLQGNPGLCGPG 508 (876)
Q Consensus 485 ~p~~~---~~~~~~~~~~~N~~~C~~~ 508 (876)
+|... +.++..+++.+|||.|+|+
T Consensus 488 l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 488 VPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 66542 5567778899999999875
No 37
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9e-44 Score=414.92 Aligned_cols=386 Identities=20% Similarity=0.220 Sum_probs=311.3
Q ss_pred EEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccc-cCCCccC
Q 002826 76 TVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEG-KIPESIG 154 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~-~~p~~~~ 154 (876)
.+..++++++.+++..|..++.+++|++|+|++|++++ +|.. .+++|++|+|++| ++++ .+|..|+
T Consensus 46 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L~~N----------~l~~~~~p~~~~ 112 (520)
T 2z7x_B 46 KLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHLDLSFN----------AFDALPICKEFG 112 (520)
T ss_dssp TCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCSEEECCSS----------CCSSCCCCGGGG
T ss_pred cccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCCccEEeccCC----------ccccccchhhhc
Confidence 57789999999999999999999999999999999996 5655 7889988866555 5555 4677888
Q ss_pred CccccceecccccccCCCcCccccCCCcc--eEEEccCCCCc-CCCCCCcccc--------------------------c
Q 002826 155 SLVNLQVLNLGSNLLSGSVPFVFGNFSEL--VVLDLSQNAYL-ISEIPSDIGK--------------------------L 205 (876)
Q Consensus 155 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~~~-~~~~p~~~~~--------------------------l 205 (876)
++++|++|+|++|++++ ..|..+++| ++|+|++|++. .+..|..+.. +
T Consensus 113 ~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l 189 (520)
T 2z7x_B 113 NMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTV 189 (520)
T ss_dssp GCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTC
T ss_pred cCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcc
Confidence 88888888888888875 456667777 88888888731 2344544444 5
Q ss_pred CcccEEEecCCC-------CcccCCccccCCCCCcEEecccCccCCCCCCcccc--ccccccEEEeccccccCcCCccc-
Q 002826 206 EKLEQLFLQSSG-------FHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGS--SLLKLVSFDVSQNKLSGSFPNGI- 275 (876)
Q Consensus 206 ~~L~~L~L~~n~-------l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~--~l~~L~~L~L~~N~l~~~~~~~~- 275 (876)
++|+.|++++|. +.+.+| .|..+++|+.|++++|.+++..+..+.. ..++|++|++++|+++|.+|..+
T Consensus 190 ~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~ 268 (520)
T 2z7x_B 190 ANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDF 268 (520)
T ss_dssp SEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCC
T ss_pred cceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchh
Confidence 666666666665 555444 5667777777777777766432222211 13589999999999999999998
Q ss_pred ----ccCCccceeeeecccccccCC-CCCccc---cccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCcccc
Q 002826 276 ----CKANGLVNLSLHKNFFNGSIP-GSINEC---LNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSI 347 (876)
Q Consensus 276 ----~~l~~L~~L~L~~N~i~~~~~-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 347 (876)
.++++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..+
T Consensus 269 ~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~ 344 (520)
T 2z7x_B 269 DYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENC 344 (520)
T ss_dssp CCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTC
T ss_pred hcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhh
Confidence 9999999999999999 445 455555 67999999999987433 12688999999999999999999999
Q ss_pred ccCCCCCeeeccCcccCC--CCCCccccccCccEEeCCCccccCCCCC-CcCCCCCccEEEccCCccccCCc-Ccccccc
Q 002826 348 SMAAQLEQVQIDNNRFTS--SIPQGLGSVKSLYRFSASQNSFYGSLPP-NFCDSPVMSIINLSQNSISGQIP-ELKKCRK 423 (876)
Q Consensus 348 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~~~-~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~ 423 (876)
..+++|++|++++|++++ .+|..+..+++|+.|++++|.+++.+|. .|..+++|+.|++++|++++..+ .+. ++
T Consensus 345 ~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~ 422 (520)
T 2z7x_B 345 GHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PR 422 (520)
T ss_dssp CCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TT
T ss_pred ccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--cc
Confidence 999999999999999996 5667899999999999999999985554 58899999999999999987666 443 79
Q ss_pred cceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCc-cccc-ccceEEccCCccccccC
Q 002826 424 LVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQG-LQNL-KLALFNVSFNKLSGRVP 486 (876)
Q Consensus 424 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l-~l~~l~ls~N~l~~~~p 486 (876)
|++|+|++|+|+ .+|..+..+++|++|+|++|+|++ +|.. +..+ +++.|++++|++++..+
T Consensus 423 L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 423 IKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccCC
Confidence 999999999999 778877799999999999999994 6654 7777 58999999999998766
No 38
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.3e-42 Score=394.75 Aligned_cols=357 Identities=20% Similarity=0.251 Sum_probs=266.1
Q ss_pred eeecCCccccccCCCccCCccccceecccccccCCCc-CccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecC
Q 002826 137 VLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSV-PFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQS 215 (876)
Q Consensus 137 ~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~ 215 (876)
+|||++|++++..|..|+++++|++|+|++|.+.+.+ +..|.++++|++|+|++|++ .+..|..|.++++|++|+|++
T Consensus 34 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l-~~~~~~~~~~l~~L~~L~L~~ 112 (455)
T 3v47_A 34 YVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQF-LQLETGAFNGLANLEVLTLTQ 112 (455)
T ss_dssp EEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTT-CEECTTTTTTCTTCCEEECTT
T ss_pred EEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCcc-CccChhhccCcccCCEEeCCC
Confidence 3355566667777888888888888888888887444 56788888888888888872 334466778888888888888
Q ss_pred CCCcccCCcc--ccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccC--Cccceeeeecccc
Q 002826 216 SGFHGVIPDS--FVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKA--NGLVNLSLHKNFF 291 (876)
Q Consensus 216 n~l~~~~~~~--~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~i 291 (876)
|++++..+.. |.++++|++|+|++|++++..|..++..+++|++|++++|++++..+..+..+ .+|+.|++++|.+
T Consensus 113 n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l 192 (455)
T 3v47_A 113 CNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITL 192 (455)
T ss_dssp SCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBC
T ss_pred CCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcc
Confidence 8887644433 77788888888888888755566655667778888888777777777776665 5677777777777
Q ss_pred cccCCCCCc--------cccccceeecccccCCCCCCcccCCC---CcccEEEecCCcccccCccccccCCCCCeeeccC
Q 002826 292 NGSIPGSIN--------ECLNLERFQVQDNGFSGDFPDKLWSL---PRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDN 360 (876)
Q Consensus 292 ~~~~~~~~~--------~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 360 (876)
.+..+..+. .+++|++|++++|++++..|..+... ++|+.|++++|.+.+. .+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~--------------~~~~ 258 (455)
T 3v47_A 193 QDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGS--------------SFGH 258 (455)
T ss_dssp TTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSC--------------CTTC
T ss_pred cccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccc--------------ccch
Confidence 655444322 34455555555555555444444332 4455555555544321 1112
Q ss_pred cccCCCCCCccccc--cCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCCcCCCC
Q 002826 361 NRFTSSIPQGLGSV--KSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGE 437 (876)
Q Consensus 361 N~l~~~~p~~~~~l--~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~ 437 (876)
+.+.+..+..+..+ ++|+.|++++|.+++..|..|..+++|+.|+|++|++++.++ .|..+++|++|+|++|++++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 338 (455)
T 3v47_A 259 TNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSI 338 (455)
T ss_dssp CSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred hhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCc
Confidence 23333333344433 689999999999999999999999999999999999999877 899999999999999999988
Q ss_pred CCcCCCCCCCcceeeCCCCcccccCCCccccc-ccceEEccCCccccccCCc--ccCCCCCccccCCCCCCCCC
Q 002826 438 IPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL-KLALFNVSFNKLSGRVPYS--LISGLPASYLQGNPGLCGPG 508 (876)
Q Consensus 438 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~ls~N~l~~~~p~~--~~~~~~~~~~~~N~~~C~~~ 508 (876)
.|..|..+++|++|+|++|++++..|..+..+ +++.|++++|++++..|.. .+.++..+++.+||+.|+|+
T Consensus 339 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 339 DSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 89999999999999999999999889999888 5999999999999644432 25677888999999999987
No 39
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-42 Score=386.19 Aligned_cols=261 Identities=23% Similarity=0.338 Sum_probs=196.1
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEe------CCeE
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHS------DESI 653 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~ 653 (876)
|.....+|.|+ ||+||+|.. .+|+.||||++..... ...+.+.+|+++|+.++|||||++++++.. .+..
T Consensus 56 Y~~~~~lG~G~-fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 56 YEIIETIGNGA-YGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp EEEEEEEEECS-SCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred eEEEEEEeccc-CeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 44444555555 999999965 5899999999965432 223567899999999999999999999764 3679
Q ss_pred EEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcc
Q 002826 654 FLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVG 733 (876)
Q Consensus 654 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~ 733 (876)
|+|||||+ |+|.+++.+.+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 135 ~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 99999996 58999997654 799999999999999999999999 99999999999999999999999999998765
Q ss_pred ccc--cccccccccccccccCccccCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHh-hcccccc
Q 002826 734 EAA--FQSTMSSEYALSCYNAPEYGYSK-KATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKI-NITNGAI 809 (876)
Q Consensus 734 ~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~ 809 (876)
... .........||+.|||||++.+. .++.++||||+||++|||++|++||.+...... ...+.... .......
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~--l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ--LQLIMMVLGTPSPAVI 287 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH--HHHHHHHHCCCCGGGT
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH--HHHHHHhcCCCChHHh
Confidence 322 12234456799999999997764 579999999999999999999999987543321 12111111 1000000
Q ss_pred cc------------c----ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 810 QV------------L----DPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 810 ~~------------~----d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.. + ...+..........+.+++.+||..||++|||+.|+++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00 0 000111111224567899999999999999999999873
No 40
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2e-42 Score=379.91 Aligned_cols=258 Identities=19% Similarity=0.296 Sum_probs=192.8
Q ss_pred cccCCCCCCCCceEEEEEEe----CCCcEEEEEEEecCCccCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEEE
Q 002826 584 DEKSSAGNGGPFGRVYILSL----PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 658 (876)
|++.+..|.|+||+||+|+. .+++.||+|++... ....++.+|+++++.+ +|||||++++++.++++.|+|||
T Consensus 23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE 100 (361)
T 4f9c_A 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP 100 (361)
T ss_dssp CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence 44444444455999999964 25789999998654 4566788999999998 69999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCC-CCeEEccccchhhcccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDAD-FEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~-~~~kl~DfGla~~~~~~~~ 737 (876)
|+++|+|.+++. .+++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.......
T Consensus 101 ~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 101 YLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp CCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred CCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 999999999984 489999999999999999999999 99999999999999876 7999999999976543211
Q ss_pred --------------------------ccccccccccccccCccccCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCcc
Q 002826 738 --------------------------QSTMSSEYALSCYNAPEYGYSK-KATAQMDAYSFGVVLLELITGRQAEQAEPAE 790 (876)
Q Consensus 738 --------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~ 790 (876)
.......+||+.|||||++.+. .++.++||||+||++|||++|+.||.....+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~ 253 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD 253 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCH
Confidence 0112344699999999998765 5899999999999999999999999765544
Q ss_pred hhhHHHHHHHHhh---------ccccc---ccc--------------cC---hhh----------hhhcHHHHHHHHHHH
Q 002826 791 SLDVVKWVRRKIN---------ITNGA---IQV--------------LD---PKI----------ANCYQQQMLGALEIA 831 (876)
Q Consensus 791 ~~~~~~~~~~~~~---------~~~~~---~~~--------------~d---~~~----------~~~~~~~~~~~~~li 831 (876)
...+......... ..... ... .+ |.. ...+...+.++.+++
T Consensus 254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl 333 (361)
T 4f9c_A 254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL 333 (361)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHH
T ss_pred HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHH
Confidence 3322222111000 00000 000 00 000 011112245678999
Q ss_pred HHccCCCCCCCCCHHHHHH
Q 002826 832 LRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 832 ~~cl~~dP~~RPs~~ell~ 850 (876)
.+|++.||++|||++|+++
T Consensus 334 ~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 334 DKLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHHTCSCTTTSCCHHHHHT
T ss_pred HHHCcCChhHCcCHHHHhc
Confidence 9999999999999999986
No 41
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2e-42 Score=406.52 Aligned_cols=399 Identities=17% Similarity=0.186 Sum_probs=302.0
Q ss_pred EEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCccc---------------ceeec
Q 002826 76 TVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLI---------------WVLDL 140 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l---------------~~LdL 140 (876)
.+..++++++.+++..|..++.+++|++|+|++|.+++..|..|+++++|++|+|++|.+ ++|++
T Consensus 51 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L 130 (549)
T 2z81_A 51 NLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRI 130 (549)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEE
T ss_pred cccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEEC
Confidence 577899999999999999999999999999999999998888899999999998888764 34556
Q ss_pred CCccccccC-CCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcc-cccCcccEEEecCCCC
Q 002826 141 SRNHIEGKI-PESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDI-GKLEKLEQLFLQSSGF 218 (876)
Q Consensus 141 ~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~-~~l~~L~~L~L~~n~l 218 (876)
++|++.+.+ +..|.++++|++|+|++|++++..|..++++++|++|++++|. ...+|..+ ..+++|++|++++|++
T Consensus 131 ~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~--~~~~~~~~~~~l~~L~~L~L~~n~l 208 (549)
T 2z81_A 131 GNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSE--SAFLLEIFADILSSVRYLELRDTNL 208 (549)
T ss_dssp EESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSB--STTHHHHHHHSTTTBSEEEEESCBC
T ss_pred CCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCc--ccccchhhHhhcccccEEEccCCcc
Confidence 666533333 3456666666666666666665566666666666666666665 34444432 3456666666666666
Q ss_pred cccC--C-ccccCCCCCcEEecccCccCCCCCCcc---ccccccccEEEeccccccCcC---------------------
Q 002826 219 HGVI--P-DSFVGLQSLSILDLSQNNLTGEVPQSL---GSSLLKLVSFDVSQNKLSGSF--------------------- 271 (876)
Q Consensus 219 ~~~~--~-~~~~~l~~L~~L~Ls~N~l~~~ip~~~---~~~l~~L~~L~L~~N~l~~~~--------------------- 271 (876)
++.. | .....+++|+.|++++|.+++..+..+ ...+++|+.+++++|.+.+..
T Consensus 209 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l 288 (549)
T 2z81_A 209 ARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTI 288 (549)
T ss_dssp TTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEE
T ss_pred ccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccc
Confidence 5531 1 122345566666666666553222211 123556677777777665431
Q ss_pred --------------CcccccCCccceeeeecccccccCCCCC-ccccccceeecccccCCCCCC---cccCCCCcccEEE
Q 002826 272 --------------PNGICKANGLVNLSLHKNFFNGSIPGSI-NECLNLERFQVQDNGFSGDFP---DKLWSLPRIKLIR 333 (876)
Q Consensus 272 --------------~~~~~~l~~L~~L~L~~N~i~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~ 333 (876)
+..+....+|+.|++++|.++ .+|..+ ..+++|++|++++|++++..| ..+..+++|+.|+
T Consensus 289 ~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~ 367 (549)
T 2z81_A 289 RRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLV 367 (549)
T ss_dssp ESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEE
T ss_pred cccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEE
Confidence 111233467899999999998 455554 689999999999999998764 3478899999999
Q ss_pred ecCCcccccCc--cccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCcc
Q 002826 334 AESNRFSGAIP--DSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSI 411 (876)
Q Consensus 334 L~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l 411 (876)
+++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++|++|++++|.+++. |..+ .++|++|+|++|+|
T Consensus 368 Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l-~~~~--~~~L~~L~Ls~N~l 443 (549)
T 2z81_A 368 LSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVV-KTCI--PQTLEVLDVSNNNL 443 (549)
T ss_dssp CTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCC-CTTS--CTTCSEEECCSSCC
T ss_pred ccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccc-cchh--cCCceEEECCCCCh
Confidence 99999987654 56899999999999999999 7888999999999999999999854 3333 26899999999999
Q ss_pred ccCCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccc-ccceEEccCCccccccC
Q 002826 412 SGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL-KLALFNVSFNKLSGRVP 486 (876)
Q Consensus 412 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~ls~N~l~~~~p 486 (876)
++.+ ..+++|++|+|++|+|+ .+|. ...+++|++|||++|+|++.+|..+..+ +++.|++++|++.+.+|
T Consensus 444 ~~~~---~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 444 DSFS---LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp SCCC---CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred hhhc---ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 9864 57899999999999999 5665 5689999999999999999888888887 59999999999999888
No 42
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.9e-42 Score=375.41 Aligned_cols=295 Identities=27% Similarity=0.472 Sum_probs=177.1
Q ss_pred CCChhHHHHHHHHHhhccCCCCCCCCCCCCCCCCCcc--ccceEecCCCCCccEEEEeecCCCCCcc--cccccccCCCC
Q 002826 25 TSASTEKDTLLSFKASIDDSKNSLSTWSNTSNIHYCN--WTGVTCVTTATASLTVASINLQSLNLSG--EISSSVCELSS 100 (876)
Q Consensus 25 ~~~~~~~~all~~k~~~~~~~~~~~sW~~~~~~~~C~--w~gv~c~~~~~~~~~~~~l~l~~~~l~~--~~~~~~~~l~~ 100 (876)
.|.++|++||++||+++.||. .+++|..+ .+||. |.||+|+..+. ..+|+.++|.+++++| .+|+.++++++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~--~~~C~~~w~gv~C~~~~~-~~~l~~L~L~~~~l~~~~~~~~~l~~l~~ 77 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPT--TDCCNRTWLGVLCDTDTQ-TYRVNNLDLSGLNLPKPYPIPSSLANLPY 77 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTT--SCTTTTCSTTEEECCSSS-CCCEEEEEEECCCCSSCEECCGGGGGCTT
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCC--CCCCcCCCcceEeCCCCC-CceEEEEECCCCCccCCcccChhHhCCCC
Confidence 478899999999999998876 78999754 47998 99999976431 1267777777777777 77777777777
Q ss_pred CCeeecCC-CccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCccccC
Q 002826 101 LSNLNLAD-NLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGN 179 (876)
Q Consensus 101 L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 179 (876)
|++|+|++ |.+.+.+|..|+++++|++|+| ++|++++.+|..|.++++|++|+|++|++++.+|..|++
T Consensus 78 L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~L----------s~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 147 (313)
T 1ogq_A 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYI----------THTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEE----------EEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGG
T ss_pred CCeeeCCCCCcccccCChhHhcCCCCCEEEC----------cCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhc
Confidence 77777774 7776666666666666665533 334444556666666666666666666666555555555
Q ss_pred CCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCC-CCcEEecccCccCCCCCCcccccccccc
Q 002826 180 FSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQ-SLSILDLSQNNLTGEVPQSLGSSLLKLV 258 (876)
Q Consensus 180 l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~ip~~~~~~l~~L~ 258 (876)
+++|++|+|++|+ +++.+|..+..++ +|++|+|++|++++.+|..+.. +. |+
T Consensus 148 l~~L~~L~L~~N~-------------------------l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~-l~-L~ 200 (313)
T 1ogq_A 148 LPNLVGITFDGNR-------------------------ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN-LN-LA 200 (313)
T ss_dssp CTTCCEEECCSSC-------------------------CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGG-CC-CS
T ss_pred CCCCCeEECcCCc-------------------------ccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhC-Cc-cc
Confidence 5555555555554 4444444444444 4555555555555444443322 32 55
Q ss_pred EEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCc
Q 002826 259 SFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNR 338 (876)
Q Consensus 259 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 338 (876)
+|+|++|++++..|..|..+++|++|+|++|.+++.+|. +..+++|++|++++|++++.+|..+..+++|+.|++++|+
T Consensus 201 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 279 (313)
T 1ogq_A 201 FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNN 279 (313)
T ss_dssp EEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSE
T ss_pred EEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCc
Confidence 555555555444444455555555555555555443333 4444555555555555555555555555555555555555
Q ss_pred ccccCccccccCCCCCeeeccCcc
Q 002826 339 FSGAIPDSISMAAQLEQVQIDNNR 362 (876)
Q Consensus 339 l~~~~~~~~~~l~~L~~L~L~~N~ 362 (876)
+++.+|.. ..+++|+.|++++|+
T Consensus 280 l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 280 LCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp EEEECCCS-TTGGGSCGGGTCSSS
T ss_pred ccccCCCC-ccccccChHHhcCCC
Confidence 55555443 444555555555554
No 43
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4.2e-42 Score=400.33 Aligned_cols=256 Identities=20% Similarity=0.317 Sum_probs=207.0
Q ss_pred hhhhhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEE
Q 002826 577 HDLVIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFL 655 (876)
Q Consensus 577 ~~l~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 655 (876)
+.+...|.-...+|.|+ ||+||+|.. .+|+.||+|++........+.+.+|+++|+.++|||||++++++.+++..|+
T Consensus 153 ~~il~~Y~i~~~lG~G~-fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i 231 (573)
T 3uto_A 153 DHVLDHYDIHEELGTGA-FGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 231 (573)
T ss_dssp SCGGGTEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEE
T ss_pred CcCccccEEEEEEeecc-CeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 33444444445555555 999999966 4799999999977655556788999999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCC--CCeEEccccchhhcc
Q 002826 656 IYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDAD--FEPKLTDFALDRIVG 733 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~--~~~kl~DfGla~~~~ 733 (876)
|||||+||+|.+++.+....+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 232 v~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 232 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred EEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999999999977666899999999999999999999999 99999999999999854 899999999998876
Q ss_pred ccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccC
Q 002826 734 EAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLD 813 (876)
Q Consensus 734 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 813 (876)
.... .....||+.|||||++.+..++.++||||+||++|||++|++||........ ...+. ... ....+
T Consensus 309 ~~~~---~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~--~~~i~---~~~---~~~~~ 377 (573)
T 3uto_A 309 PKQS---VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET--LRNVK---SCD---WNMDD 377 (573)
T ss_dssp TTSE---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH--HHHHH---TTC---CCCCS
T ss_pred CCCc---eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--HHHHH---hCC---CCCCc
Confidence 4432 2334699999999999999999999999999999999999999986543321 11111 111 11111
Q ss_pred hhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 814 PKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 814 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
+.. ...+..+.++|.+||+.||++|||+.|+++.
T Consensus 378 ~~~----~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 378 SAF----SGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp GGG----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccc----cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111 1223457899999999999999999999873
No 44
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.3e-41 Score=368.85 Aligned_cols=273 Identities=32% Similarity=0.535 Sum_probs=223.1
Q ss_pred cccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCC
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQ 661 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 661 (876)
+|.....+|.|| ||.||+|...+|+.||+|++........+.+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 40 ~y~~~~~lg~G~-~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (321)
T 2qkw_B 40 NFDHKFLIGHGV-FGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME 118 (321)
T ss_dssp CCSCCCCSCBCS-SSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCT
T ss_pred ccCccceeecCC-CeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCC
Confidence 455555555555 9999999988899999999876655556789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhccC---CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 662 MGSLGDLICRQD---FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 662 ~gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
+|+|.+++.... ..+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 119 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 195 (321)
T 2qkw_B 119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT 195 (321)
T ss_dssp TCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC
T ss_pred CCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 999999997553 3589999999999999999999999 9999999999999999999999999999875533222
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcch-hhHHHHHHHHhhcccccccccChhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAES-LDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... .....|...... .......+++...
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 274 (321)
T 2qkw_B 196 HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN-NGQLEQIVDPNLA 274 (321)
T ss_dssp CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT-TTCCCSSSSSSCT
T ss_pred ccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc-cccHHHhcChhhc
Confidence 22334458999999999888889999999999999999999999998654332 344444433221 1223444454443
Q ss_pred -hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 818 -NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 818 -~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
....+....+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 275 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 275 DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 344567788999999999999999999999999999886543
No 45
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.9e-41 Score=390.77 Aligned_cols=246 Identities=19% Similarity=0.205 Sum_probs=194.0
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC---ccCHHHHHH---HHHHHhhccCccccceeeEEEeCCeEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG---CQSSKTLKT---EVKTLAKIRHKNIVKVLGFFHSDESIFL 655 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~niv~~~~~~~~~~~~~l 655 (876)
|.....+|.|| ||+||+|+.. +|+.||||++.+.. ......+.+ ++++++.++|||||+++++|.+.+..|+
T Consensus 191 f~i~k~LG~G~-fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lyl 269 (689)
T 3v5w_A 191 FSVHRIIGRGG-FGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF 269 (689)
T ss_dssp EEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEE
T ss_pred eEEEEEEeccc-CeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEE
Confidence 44445555555 9999999664 79999999996531 122333334 4666777799999999999999999999
Q ss_pred EEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccc
Q 002826 656 IYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEA 735 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 735 (876)
||||++||+|.+++.+.+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.....
T Consensus 270 VmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 270 ILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp EECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 999999999999998765 699999999999999999999999 9999999999999999999999999999876543
Q ss_pred ccccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccCh
Q 002826 736 AFQSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDP 814 (876)
Q Consensus 736 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 814 (876)
. ....+||+.|||||++.. ..|+.++||||+||++|||++|++||........ ....+.......
T Consensus 346 ~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~~i~~~i~~~~~-------- 411 (689)
T 3v5w_A 346 K----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTMAV-------- 411 (689)
T ss_dssp C----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--HHHHHHHHHCCC--------
T ss_pred C----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHhhcCCCC--------
Confidence 2 234569999999999864 5789999999999999999999999976443322 122222111110
Q ss_pred hhhhhcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002826 815 KIANCYQQQMLGALEIALRCTSVMPEKRPS-----MFEVVK 850 (876)
Q Consensus 815 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~ell~ 850 (876)
.+ +...+.++.++|.+|++.||++|++ +.||++
T Consensus 412 ~~---p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 412 EL---PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CC---CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CC---CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 01 1112345789999999999999998 677765
No 46
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=9.9e-41 Score=379.99 Aligned_cols=364 Identities=24% Similarity=0.322 Sum_probs=165.2
Q ss_pred EEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcc---cceeecCCccccccCCCc
Q 002826 76 TVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNL---IWVLDLSRNHIEGKIPES 152 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~LdL~~n~l~~~~p~~ 152 (876)
++..+++.++++ |.+|++++++++|++|++++|.+.+.+|..++++++|+.++++.|. ++.|++++|++++ +|..
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~ 89 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL 89 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC
Confidence 677889999999 8999999999999999999999999999999999987555444432 3445555555543 2221
Q ss_pred cCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCC
Q 002826 153 IGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSL 232 (876)
Q Consensus 153 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 232 (876)
.++|++|+|++|++++ +|.. +++|++|++++|+ +..+|... ++|++|++++|++++ +| .|.++++|
T Consensus 90 ---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~--l~~l~~~~---~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 90 ---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNN--LKALSDLP---PLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp ---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSC--CSCCCSCC---TTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred ---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCc--cCcccCCC---CCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 2345555555555553 3322 2445555555554 22333211 345555555555554 33 35555555
Q ss_pred cEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeeccc
Q 002826 233 SILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQD 312 (876)
Q Consensus 233 ~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 312 (876)
++|++++|+++ .+|.. .++|++|++++|++++ +| .+..+++|++|++++|++++ +|... ++|++|++++
T Consensus 156 ~~L~l~~N~l~-~lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~ 224 (454)
T 1jl5_A 156 KIIDVDNNSLK-KLPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGN 224 (454)
T ss_dssp CEEECCSSCCS-CCCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCS
T ss_pred CEEECCCCcCc-ccCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcC
Confidence 55555555554 24432 2345555555555553 23 34555555555555555543 22211 2455555555
Q ss_pred ccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCC--
Q 002826 313 NGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGS-- 390 (876)
Q Consensus 313 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~-- 390 (876)
|+++ .+|. +..+++|+.|++++|++++ +|.. .++|++|++++|++++ +|.. .++|+.|++++|++++.
T Consensus 225 n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~ 294 (454)
T 1jl5_A 225 NILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSE 294 (454)
T ss_dssp SCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESC
T ss_pred CcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccC
Confidence 5554 3332 4445555555555555543 2221 2444555555555443 2322 13444444444444431
Q ss_pred CCCC-------------cCCC-CCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCC
Q 002826 391 LPPN-------------FCDS-PVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDN 456 (876)
Q Consensus 391 ~~~~-------------~~~~-~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 456 (876)
.|.. +..+ ++|+.|++++|++++.+.. +++|++|+|++|++++ +|. .+++|++|++++|
T Consensus 295 ~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N 367 (454)
T 1jl5_A 295 LPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYN 367 (454)
T ss_dssp CCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSS
T ss_pred cCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccccccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCC
Confidence 1100 1112 3566666666666553222 3556666666666663 333 3556666666666
Q ss_pred cccc--cCCCccccc--------------ccceEEccCCcccc
Q 002826 457 NLTG--PIPQGLQNL--------------KLALFNVSFNKLSG 483 (876)
Q Consensus 457 ~l~~--~~p~~~~~l--------------~l~~l~ls~N~l~~ 483 (876)
++++ .+|.++..+ +++.||+++|+++|
T Consensus 368 ~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 368 PLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE 410 (454)
T ss_dssp CCSSCCCCCTTCCEEECCC------------------------
T ss_pred CCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCc
Confidence 6665 455555443 24555555555554
No 47
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=7e-40 Score=385.48 Aligned_cols=399 Identities=18% Similarity=0.211 Sum_probs=317.8
Q ss_pred EEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCccc-----------ceeecCCcc
Q 002826 76 TVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLI-----------WVLDLSRNH 144 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l-----------~~LdL~~n~ 144 (876)
.+..++++++.+++..+..+..+++|++|+|++|++++..|..|+++++|++|+|++|.| ++|||++|+
T Consensus 53 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~l~~L~~L~Ls~N~ 132 (562)
T 3a79_B 53 RTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCCPMASLRHLDLSFND 132 (562)
T ss_dssp TCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSCCCTTCSEEECCSSC
T ss_pred CcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCccccccCCEEECCCCC
Confidence 577899999999998889999999999999999999999999999999999999999975 579999999
Q ss_pred ccc-cCCCccCCccccceecccccccCCCcCccccCCCcc--eEEEccCCCCc-CCCCCCcccccC-cccEEEecCCCCc
Q 002826 145 IEG-KIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSEL--VVLDLSQNAYL-ISEIPSDIGKLE-KLEQLFLQSSGFH 219 (876)
Q Consensus 145 l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~~~-~~~~p~~~~~l~-~L~~L~L~~n~l~ 219 (876)
+++ .+|..|+++++|++|+|++|++++. .|.++++| ++|+|++|++. .+..|..+..+. +.-.++++.|.+.
T Consensus 133 l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~ 209 (562)
T 3a79_B 133 FDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLF 209 (562)
T ss_dssp CSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCC
T ss_pred ccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccch
Confidence 997 4578999999999999999999864 45555555 99999999831 345566666654 1114455666655
Q ss_pred ccCCc-cccCCCCCcEEecccC----------------------------ccCCC----CCCccccccccccEEEecccc
Q 002826 220 GVIPD-SFVGLQSLSILDLSQN----------------------------NLTGE----VPQSLGSSLLKLVSFDVSQNK 266 (876)
Q Consensus 220 ~~~~~-~~~~l~~L~~L~Ls~N----------------------------~l~~~----ip~~~~~~l~~L~~L~L~~N~ 266 (876)
+.+++ .+..+++|+.|++++| .+++. ++... ..++|++|++++|+
T Consensus 210 ~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~--~~~~L~~L~l~~n~ 287 (562)
T 3a79_B 210 SVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF--WPRPVEYLNIYNLT 287 (562)
T ss_dssp CCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH--TTSSEEEEEEEEEE
T ss_pred hhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhh--hcccccEEEEeccE
Confidence 44332 2344555555555555 33311 11111 13489999999999
Q ss_pred ccCcCCccc-----ccCCccceeeeecccccccCC-CCCccc---cccceeecccccCCCCCCcccCCCCcccEEEecCC
Q 002826 267 LSGSFPNGI-----CKANGLVNLSLHKNFFNGSIP-GSINEC---LNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESN 337 (876)
Q Consensus 267 l~~~~~~~~-----~~l~~L~~L~L~~N~i~~~~~-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 337 (876)
++|.+|..+ .+++.|+.++++.|.+ .+| ..+..+ .+|++|++++|.+.... ....+++|++|++++|
T Consensus 288 l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n 363 (562)
T 3a79_B 288 ITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQN 363 (562)
T ss_dssp ECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSS
T ss_pred eeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCC
Confidence 999999887 7778888888888877 333 223222 57999999999986432 1267899999999999
Q ss_pred cccccCccccccCCCCCeeeccCcccCCC--CCCccccccCccEEeCCCccccCCCC-CCcCCCCCccEEEccCCccccC
Q 002826 338 RFSGAIPDSISMAAQLEQVQIDNNRFTSS--IPQGLGSVKSLYRFSASQNSFYGSLP-PNFCDSPVMSIINLSQNSISGQ 414 (876)
Q Consensus 338 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~ 414 (876)
++++..|..+..+++|++|++++|++++. +|..+.++++|+.|++++|++++.+| ..|..+++|+.|+|++|++++.
T Consensus 364 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 443 (562)
T 3a79_B 364 VFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGS 443 (562)
T ss_dssp CCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGG
T ss_pred ccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcc
Confidence 99999999999999999999999999963 35678999999999999999998444 5688999999999999999876
Q ss_pred Cc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCc-cccc-ccceEEccCCccccccCC
Q 002826 415 IP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQG-LQNL-KLALFNVSFNKLSGRVPY 487 (876)
Q Consensus 415 ~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l-~l~~l~ls~N~l~~~~p~ 487 (876)
.+ .+. ++|++|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|.. +..+ +++.|++++|++.+.+|.
T Consensus 444 ~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 444 VFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp GGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred hhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 65 333 79999999999999 67777779999999999999999 46655 7777 588999999999987774
No 48
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.2e-40 Score=362.09 Aligned_cols=283 Identities=30% Similarity=0.514 Sum_probs=222.0
Q ss_pred cccchhhhhh--cccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEE
Q 002826 572 LRVTEHDLVI--GMDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFH 648 (876)
Q Consensus 572 ~~~~~~~l~~--~~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 648 (876)
.+++..++.. +.+...+..|.|+||.||+|+..+|+.||||++..... .....+.+|+++++.++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 3455555554 33444444444559999999988899999999865432 23347899999999999999999999999
Q ss_pred eCCeEEEEEEcCCCCCHHHHhhcc---CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEcc
Q 002826 649 SDESIFLIYEFLQMGSLGDLICRQ---DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTD 725 (876)
Q Consensus 649 ~~~~~~lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~D 725 (876)
+.+..++||||+++|+|.+++... ...+++..+..++.|++.|++|||+.+.++|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 999999999999999999999765 33499999999999999999999998777999999999999999999999999
Q ss_pred ccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCC---CcchhhHHHHHHHHh
Q 002826 726 FALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAE---PAESLDVVKWVRRKI 802 (876)
Q Consensus 726 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~---~~~~~~~~~~~~~~~ 802 (876)
||+++....... .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||... ........+|.....
T Consensus 178 fg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 178 FGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred CccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 999987653322 2233445899999999988888999999999999999999999999631 122233444544332
Q ss_pred hcccccccccChhhh-hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 002826 803 NITNGAIQVLDPKIA-NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLS 856 (876)
Q Consensus 803 ~~~~~~~~~~d~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~ 856 (876)
.. .......++... ....++...+.+++.+||+.||++|||++|++++|++..
T Consensus 257 ~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 257 KE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp SS-CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hc-hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 21 123333344333 445677788999999999999999999999999998743
No 49
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.2e-39 Score=369.29 Aligned_cols=350 Identities=16% Similarity=0.201 Sum_probs=237.4
Q ss_pred ccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccc
Q 002826 89 GEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNL 168 (876)
Q Consensus 89 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 168 (876)
+..+.+++++++|++|+|++|.+++. | .|+.+++|++|+|++|. +++. | ++.+++|++|+|++|+
T Consensus 32 ~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~----------l~~~-~--~~~l~~L~~L~Ls~N~ 96 (457)
T 3bz5_A 32 ATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNN----------ITTL-D--LSQNTNLTYLACDSNK 96 (457)
T ss_dssp TTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSC----------CSCC-C--CTTCTTCSEEECCSSC
T ss_pred cccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCc----------CCeE-c--cccCCCCCEEECcCCC
Confidence 34445666777777777777777764 4 57777777766554443 3332 2 6667777777777777
Q ss_pred cCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCC
Q 002826 169 LSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQ 248 (876)
Q Consensus 169 l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~ 248 (876)
+++. + |+++++|++|+|++|+ +..+| +..+++|++|++++|+++++ .+.++++|++|++++|+..+.++
T Consensus 97 l~~~-~--~~~l~~L~~L~L~~N~--l~~l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~~- 165 (457)
T 3bz5_A 97 LTNL-D--VTPLTKLTYLNCDTNK--LTKLD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLD- 165 (457)
T ss_dssp CSCC-C--CTTCTTCCEEECCSSC--CSCCC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCCC-
T ss_pred Ccee-e--cCCCCcCCEEECCCCc--CCeec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCcccccc-
Confidence 7654 2 6677777777777776 34444 66677777777777777764 26667777777777775444552
Q ss_pred ccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCc
Q 002826 249 SLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPR 328 (876)
Q Consensus 249 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 328 (876)
+..+++|++|++++|++++. | +..+++|+.|++++|++++. .+..+++|++|++++|++++ +| +..+++
T Consensus 166 --~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~ 234 (457)
T 3bz5_A 166 --VTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQ 234 (457)
T ss_dssp --CTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTT
T ss_pred --cccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCC
Confidence 23466777777777777753 3 66667777777777777654 36667777777777777775 34 666777
Q ss_pred ccEEEecCCcccccCccccccCC-------CCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCC--------
Q 002826 329 IKLIRAESNRFSGAIPDSISMAA-------QLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPP-------- 393 (876)
Q Consensus 329 L~~L~L~~N~l~~~~~~~~~~l~-------~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~-------- 393 (876)
|+.|++++|++++..+..+..+. +|+.|++++|++.+.+| ++.+++|+.|++++|.+.+.+|.
T Consensus 235 L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L 312 (457)
T 3bz5_A 235 LTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITEL 312 (457)
T ss_dssp CSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCC
T ss_pred CCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEe
Confidence 77777777777766555444443 45667777777666665 45677888888888876665553
Q ss_pred CcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCcccccccce
Q 002826 394 NFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNLKLAL 473 (876)
Q Consensus 394 ~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~ 473 (876)
.+.++++|+.|++++|+|++. .+..+++|+.|++++|+|++ ++.|..|++++|.++|. + ....+..
T Consensus 313 ~l~~~~~L~~L~L~~N~l~~l--~l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-~---~~~~l~~ 378 (457)
T 3bz5_A 313 DLSQNPKLVYLYLNNTELTEL--DVSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-G---QTITMPK 378 (457)
T ss_dssp CCTTCTTCCEEECTTCCCSCC--CCTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-E---EEEECCC
T ss_pred chhhcccCCEEECCCCccccc--ccccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-c---eeeecCc
Confidence 245557788888888888875 37888888888888888885 35677788888888875 1 1124677
Q ss_pred EEccCCccccccCCcccC
Q 002826 474 FNVSFNKLSGRVPYSLIS 491 (876)
Q Consensus 474 l~ls~N~l~~~~p~~~~~ 491 (876)
+++++|+++|.+|..++.
T Consensus 379 l~l~~N~l~g~ip~~~~~ 396 (457)
T 3bz5_A 379 ETLTNNSLTIAVSPDLLD 396 (457)
T ss_dssp BCCBTTBEEEECCTTCBC
T ss_pred cccccCcEEEEcChhHhc
Confidence 899999999999976543
No 50
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=6.8e-40 Score=352.85 Aligned_cols=254 Identities=22% Similarity=0.301 Sum_probs=206.7
Q ss_pred hhhhhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEE
Q 002826 577 HDLVIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFL 655 (876)
Q Consensus 577 ~~l~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 655 (876)
++....|.....+|.|+ ||+||+|.. .+|+.||+|++........+.+.+|+.+++.++||||+++++++...+..++
T Consensus 16 ~~~~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 94 (297)
T 3fxz_A 16 GDPKKKYTRFEKIGQGA-SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94 (297)
T ss_dssp SCGGGTBCCCEEEEEET-TEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CChhhceeeeeeeccCC-CeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEE
Confidence 34444555556666666 999999975 5899999999987666677889999999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccc
Q 002826 656 IYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEA 735 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 735 (876)
||||+++|+|.+++.+. .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp EEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 99999999999999764 589999999999999999999999 9999999999999999999999999998876543
Q ss_pred ccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChh
Q 002826 736 AFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPK 815 (876)
Q Consensus 736 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 815 (876)
.. ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||........ .......... ....
T Consensus 170 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~-----~~~~-- 238 (297)
T 3fxz_A 170 QS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA--LYLIATNGTP-----ELQN-- 238 (297)
T ss_dssp TC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHHHHCSC-----CCSC--
T ss_pred cc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhCCCC-----CCCC--
Confidence 22 23345689999999999888899999999999999999999999976543321 1111111000 0000
Q ss_pred hhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 816 IANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 816 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 239 ----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 239 ----PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp ----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11223457899999999999999999999873
No 51
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=359.45 Aligned_cols=255 Identities=28% Similarity=0.482 Sum_probs=206.0
Q ss_pred CCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCCCH
Q 002826 587 SSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMGSL 665 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 665 (876)
..+|.|| ||+||+|... +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||+++++|
T Consensus 16 ~~lG~G~-~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 94 (310)
T 3s95_A 16 EVLGKGC-FGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94 (310)
T ss_dssp EEEECCS-SEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCC-CEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcH
Confidence 4455555 9999999764 7999999998766555667899999999999999999999999999999999999999999
Q ss_pred HHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccc------
Q 002826 666 GDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQS------ 739 (876)
Q Consensus 666 ~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~------ 739 (876)
.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 95 ~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 171 (310)
T 3s95_A 95 RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL 171 (310)
T ss_dssp HHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC------------
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccc
Confidence 999988777899999999999999999999999 99999999999999999999999999998765332111
Q ss_pred ------ccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccC
Q 002826 740 ------TMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLD 813 (876)
Q Consensus 740 ------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 813 (876)
......||+.|+|||.+.+..++.++||||||+++|||++|..||....................
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--------- 242 (310)
T 3s95_A 172 KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR--------- 242 (310)
T ss_dssp --------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH---------
T ss_pred cccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc---------
Confidence 11144689999999999999999999999999999999999999876443322110001100000
Q ss_pred hhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 814 PKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 814 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
......+..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 243 ----~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 243 ----YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp ----TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 00111223578999999999999999999999999998653
No 52
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=363.12 Aligned_cols=265 Identities=21% Similarity=0.291 Sum_probs=206.6
Q ss_pred hcccccCCCCCCCCceEEEEEEeC----CCcEEEEEEEecCC-ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEE
Q 002826 581 IGMDEKSSAGNGGPFGRVYILSLP----SGELIAVKKLVNFG-CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFL 655 (876)
Q Consensus 581 ~~~~~~~~~g~~g~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 655 (876)
.+.+.+.+..|.|+||+||+|... .+..||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 333444444455559999999774 34569999997542 2334678899999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccc
Q 002826 656 IYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEA 735 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 735 (876)
||||+++++|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 9999999999999987766899999999999999999999999 9999999999999999999999999999877543
Q ss_pred cc-ccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccC
Q 002826 736 AF-QSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLD 813 (876)
Q Consensus 736 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 813 (876)
.. ........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+...... ..
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~~~------~~- 275 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VISSVEEGYRL------PA- 275 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHHHHTTCCC------CC-
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHcCCCC------CC-
Confidence 21 122333446778999999988889999999999999999999 999997644332 22221111000 00
Q ss_pred hhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcccc
Q 002826 814 PKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLLS 863 (876)
Q Consensus 814 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~~ 863 (876)
....+..+.+++.+||+.||++|||+.|+++.|+++.......+
T Consensus 276 ------~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~~ 319 (325)
T 3kul_A 276 ------PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLR 319 (325)
T ss_dssp ------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC---
T ss_pred ------CCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccccc
Confidence 11223467899999999999999999999999999987665543
No 53
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.7e-40 Score=349.76 Aligned_cols=254 Identities=22% Similarity=0.381 Sum_probs=209.0
Q ss_pred cccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCC
Q 002826 584 DEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMG 663 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 663 (876)
.....+|.|| ||+||+|...+++.||+|++.... ...+++.+|++++++++||||+++++++.+++..++||||++++
T Consensus 13 ~~~~~lg~G~-~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (269)
T 4hcu_A 13 TFVQEIGSGQ-FGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 90 (269)
T ss_dssp EEEEEEEECS-SCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred eeeheecCCC-ccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCC
Confidence 3345556555 999999998889999999997543 45678999999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccccccc
Q 002826 664 SLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSS 743 (876)
Q Consensus 664 sL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~ 743 (876)
+|.+++......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....... .....
T Consensus 91 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~ 166 (269)
T 4hcu_A 91 CLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTG 166 (269)
T ss_dssp BHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH-HSTTS
T ss_pred cHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccc-ccccC
Confidence 99999987777899999999999999999999999 999999999999999999999999999987654322 22334
Q ss_pred ccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHH
Q 002826 744 EYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQ 822 (876)
Q Consensus 744 ~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 822 (876)
..+++.|+|||......++.++||||+|+++|||++ |+.||....... ....... . .. ...+. .
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~--~~~~~~~---~---~~-~~~~~------~ 231 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDIST---G---FR-LYKPR------L 231 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHT---T---CC-CCCCT------T
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHhc---C---cc-CCCCC------c
Confidence 446788999999988889999999999999999999 999997654332 1111111 1 00 01111 1
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 823 QMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 823 ~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
....+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 232 ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 133578999999999999999999999999998764
No 54
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.9e-40 Score=365.82 Aligned_cols=253 Identities=24% Similarity=0.400 Sum_probs=204.2
Q ss_pred cCCCCCCCCceEEEEEEe--------CCCcEEEEEEEecCCc-cCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEE
Q 002826 586 KSSAGNGGPFGRVYILSL--------PSGELIAVKKLVNFGC-QSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFL 655 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~--------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 655 (876)
...+|.|+ ||.||+|+. .++..||||++..... ...+.+.+|+++++++ +||||+++++++.+++..|+
T Consensus 86 ~~~LG~G~-fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 86 GKPLGEGC-FGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEESCCS-SSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeEEeeCC-CeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 34455555 999999965 2456899999965432 2245788999999999 89999999999999999999
Q ss_pred EEEcCCCCCHHHHhhccC---------------CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCC
Q 002826 656 IYEFLQMGSLGDLICRQD---------------FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFE 720 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~ 720 (876)
||||+++|+|.+++.... ..+++..+.+++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 241 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 241 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCC
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECCCCC
Confidence 999999999999997643 3488999999999999999999999 9999999999999999999
Q ss_pred eEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHH
Q 002826 721 PKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVR 799 (876)
Q Consensus 721 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 799 (876)
+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||........ ...+.
T Consensus 242 ~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~--~~~~~ 319 (370)
T 2psq_A 242 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL--FKLLK 319 (370)
T ss_dssp EEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HHHHH
T ss_pred EEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH--HHHHh
Confidence 99999999987664433333344457889999999988899999999999999999999 9999987554332 22211
Q ss_pred HHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 002826 800 RKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLST 857 (876)
Q Consensus 800 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~ 857 (876)
... .. . ........+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 320 ~~~------~~----~---~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 320 EGH------RM----D---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp TTC------CC----C---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCC------CC----C---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 110 00 0 011223467899999999999999999999999999864
No 55
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.9e-39 Score=350.00 Aligned_cols=264 Identities=33% Similarity=0.515 Sum_probs=212.5
Q ss_pred CCCCCCCCceEEEEEEeCCCcEEEEEEEecCC----ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCC
Q 002826 587 SSAGNGGPFGRVYILSLPSGELIAVKKLVNFG----CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQM 662 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 662 (876)
..+|.|| ||.||+|.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 37 ~~lg~G~-~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 114 (307)
T 2nru_A 37 NKMGEGG-FGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN 114 (307)
T ss_dssp CEEEECS-SEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred CccccCC-CeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCC
Confidence 4455555 999999987 78999999986532 12346788999999999999999999999999999999999999
Q ss_pred CCHHHHhhcc--CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccc
Q 002826 663 GSLGDLICRQ--DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQST 740 (876)
Q Consensus 663 gsL~~~l~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 740 (876)
++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 115 ~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 191 (307)
T 2nru_A 115 GSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191 (307)
T ss_dssp CBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEE
T ss_pred CcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCCcEEEeeccccccccccccccc
Confidence 9999998643 34689999999999999999999999 999999999999999999999999999987654332223
Q ss_pred cccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhc
Q 002826 741 MSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCY 820 (876)
Q Consensus 741 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 820 (876)
.....||+.|+|||...+ .++.++||||||+++|||++|++||........ ...+..............+++.+....
T Consensus 192 ~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (307)
T 2nru_A 192 TSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLDIKEEIEDEEKTIEDYIDKKMNDAD 269 (307)
T ss_dssp CSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TTHHHHHHHTTSCCHHHHSCSSCSCCC
T ss_pred ccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HHHHHHHhhhhhhhhhhhccccccccc
Confidence 334568999999998765 578999999999999999999999986543321 122222222222223444455555556
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 002826 821 QQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLST 857 (876)
Q Consensus 821 ~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~ 857 (876)
......+.+++.+||+.||++|||++|+++.|+++..
T Consensus 270 ~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 270 STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 6677889999999999999999999999999998754
No 56
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=6.2e-39 Score=368.24 Aligned_cols=342 Identities=25% Similarity=0.376 Sum_probs=180.2
Q ss_pred EEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCc
Q 002826 77 VASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSL 156 (876)
Q Consensus 77 ~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l 156 (876)
+..+++.++++.. +| .+..+++|++|+|++|.+++..| ++++++|++|+|++| ++++..| ++++
T Consensus 48 l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n----------~l~~~~~--~~~l 111 (466)
T 1o6v_A 48 VTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNN----------QIADITP--LANL 111 (466)
T ss_dssp CCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS----------CCCCCGG--GTTC
T ss_pred ccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCC----------ccccChh--hcCC
Confidence 3344555555443 22 25556666666666666655433 555555555543333 3333222 5556
Q ss_pred cccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEe
Q 002826 157 VNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILD 236 (876)
Q Consensus 157 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 236 (876)
++|++|+|++|++++..+ +.++++|++|+|++|. +..+| .+..+++|++|+++ |.+.+.. .+.++++|++|+
T Consensus 112 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~--l~~~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~ 183 (466)
T 1o6v_A 112 TNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNT--ISDIS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLD 183 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEE--ECCCG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCc--cCCCh-hhccCCcccEeecC-CcccCch--hhccCCCCCEEE
Confidence 666666666666654332 5566666666666665 33333 35556666666654 3343322 255566666666
Q ss_pred cccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCC
Q 002826 237 LSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFS 316 (876)
Q Consensus 237 Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 316 (876)
+++|+++ .++. +..+++|++|++++|++++..| +..+++|++|++++|.+++. ..+..+++|+.|++++|.++
T Consensus 184 l~~n~l~-~~~~--l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~ 256 (466)
T 1o6v_A 184 ISSNKVS-DISV--LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQIS 256 (466)
T ss_dssp CCSSCCC-CCGG--GGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred CcCCcCC-CChh--hccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccc
Confidence 6666655 3332 2345566666666666554433 44555566666666655532 23555555555555555555
Q ss_pred CCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcC
Q 002826 317 GDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFC 396 (876)
Q Consensus 317 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~ 396 (876)
+..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++..| +.
T Consensus 257 ~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~ 328 (466)
T 1o6v_A 257 NLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VS 328 (466)
T ss_dssp CCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GG
T ss_pred cchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hc
Confidence 4433 5555555555555555554433 5555555555555555554332 4555555555555555554443 44
Q ss_pred CCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccc
Q 002826 397 DSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTG 460 (876)
Q Consensus 397 ~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 460 (876)
.+++|+.|++++|++++. +.+..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 329 ~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 329 SLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp GCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred cCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 555555555555555543 345555555555555555554444 5555555555555555553
No 57
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4e-40 Score=349.26 Aligned_cols=254 Identities=23% Similarity=0.374 Sum_probs=207.3
Q ss_pred ccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCCC
Q 002826 585 EKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMGS 664 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 664 (876)
....+|.|| ||.||+|+..++..||+|++.... ...+++.+|++++++++||||+++++++.+++..++||||+++++
T Consensus 12 ~~~~lg~G~-~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 89 (268)
T 3sxs_A 12 LLKELGSGQ-FGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGC 89 (268)
T ss_dssp EEEEEEEET-TEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCB
T ss_pred eeeeeccCC-CceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCc
Confidence 334455555 999999999888899999997543 456789999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccccccc
Q 002826 665 LGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSSE 744 (876)
Q Consensus 665 L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 744 (876)
|.+++...+..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++........ .....
T Consensus 90 L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-~~~~~ 165 (268)
T 3sxs_A 90 LLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV-SSVGT 165 (268)
T ss_dssp HHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE-ECCSC
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhh-cccCC
Confidence 9999987766799999999999999999999999 9999999999999999999999999999876543322 22334
Q ss_pred cccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHHH
Q 002826 745 YALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQ 823 (876)
Q Consensus 745 ~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 823 (876)
.+|+.|+|||...+..++.++||||+|+++|||++ |+.||........ ..... ... ....+. ..
T Consensus 166 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~~~---~~~----~~~~~~------~~ 230 (268)
T 3sxs_A 166 KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV--VLKVS---QGH----RLYRPH------LA 230 (268)
T ss_dssp CCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HHHHH---TTC----CCCCCT------TS
T ss_pred CcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH--HHHHH---cCC----CCCCCC------cC
Confidence 46778999999888888999999999999999999 9999976443321 11111 110 001111 11
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 824 MLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 824 ~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
...+.+++.+||+.||++|||+.|+++.|+.+.++.
T Consensus 231 ~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 231 SDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp CHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 235789999999999999999999999999997654
No 58
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=371.59 Aligned_cols=316 Identities=20% Similarity=0.200 Sum_probs=192.5
Q ss_pred ecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCC
Q 002826 139 DLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGF 218 (876)
Q Consensus 139 dL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l 218 (876)
+.++++++ .+|..+. +++++|+|++|+|++..|..|.++++|++|+|++|. +.+..|..|.++++|++|+|++|++
T Consensus 17 ~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 17 LCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENI-VSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp ECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSC-CCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCc-cCEeChhhhhCCccCCEEECCCCcC
Confidence 33444443 3344332 356666666666665555566666666666666664 1222244455555555555555555
Q ss_pred cccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCC
Q 002826 219 HGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGS 298 (876)
Q Consensus 219 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~ 298 (876)
+++.+..|.++++|++|+|++|++++ +++..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVI-LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CccCcccccCCCCCCEEECCCCcccc-CChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 55555566777777777777777763 33333445677777777777777666666666777777777777766655555
Q ss_pred CccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCcc
Q 002826 299 INECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLY 378 (876)
Q Consensus 299 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 378 (876)
|..+++|+.|++++|.+++..+..|..+++|+.|++++|.+.+.+|.......+|++|++++|++++..+..+.++++|+
T Consensus 172 l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 251 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLR 251 (477)
T ss_dssp HTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCC
T ss_pred hcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccC
Confidence 66666666666666666666666666666666666666666555555555555666666666666643334566666666
Q ss_pred EEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCc
Q 002826 379 RFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNN 457 (876)
Q Consensus 379 ~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 457 (876)
.|++++|.+++..+..|..+++|+.|+|++|++++..+ .|..+++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 331 (477)
T 2id5_A 252 FLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNP 331 (477)
T ss_dssp EEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSC
T ss_pred eeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCC
Confidence 66666666666666666666666666666666665544 55666666666666666665555556666666666666666
Q ss_pred cc
Q 002826 458 LT 459 (876)
Q Consensus 458 l~ 459 (876)
++
T Consensus 332 l~ 333 (477)
T 2id5_A 332 LA 333 (477)
T ss_dssp EE
T ss_pred cc
Confidence 55
No 59
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1e-39 Score=353.35 Aligned_cols=256 Identities=30% Similarity=0.392 Sum_probs=195.6
Q ss_pred ccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCcc--CHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCC
Q 002826 585 EKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQ--SSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQM 662 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 662 (876)
....+|.|| ||+||+|+. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 41 i~~~lG~G~-~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 3p86_A 41 IKEKIGAGS-FGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR 118 (309)
T ss_dssp EEEEEEECS-SEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTT
T ss_pred eeeEeecCC-CeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCC
Confidence 344555555 999999987 7899999998754322 235688999999999999999999999999999999999999
Q ss_pred CCHHHHhhccC--CcCCHHHHHHHHHHHHHHHHHhhccCCCC--ccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 663 GSLGDLICRQD--FQLQWSIRLKIAIGVAQGLAYLHKDYVPH--LLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 663 gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
|+|.+++.+.+ ..+++..+..++.|++.|++|||+. + |+||||||+||+++.++.+||+|||+++......
T Consensus 119 ~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~-- 193 (309)
T 3p86_A 119 GSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF-- 193 (309)
T ss_dssp CBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----------
T ss_pred CcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc--
Confidence 99999997653 2389999999999999999999999 8 9999999999999999999999999998654322
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ....+.... .. ..+
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~~~~~-~~----~~~------ 260 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAVGFKC-KR----LEI------ 260 (309)
T ss_dssp --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHHHSC-CC----CCC------
T ss_pred cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhcC-CC----CCC------
Confidence 12234458999999999999889999999999999999999999998654332 122111110 00 000
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcc
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSL 861 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~ 861 (876)
.......+.+++.+||+.||++|||+.|+++.|+.+.+....
T Consensus 261 -~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 261 -PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp -CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred -CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 111233578999999999999999999999999998776543
No 60
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.1e-39 Score=355.50 Aligned_cols=266 Identities=27% Similarity=0.330 Sum_probs=203.6
Q ss_pred ccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCC----eEEEEEEcC
Q 002826 585 EKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDE----SIFLIYEFL 660 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~ 660 (876)
....+|.|| ||+||+|+.. ++.||||++.... .......+|+.++++++||||+++++++.+.. ..++||||+
T Consensus 28 ~~~~lg~G~-~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~ 104 (322)
T 3soc_A 28 LLEVKARGR-FGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFH 104 (322)
T ss_dssp EEEEEECST-TCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred hhheecccC-ceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecC
Confidence 334455555 9999999874 8999999996532 33445667999999999999999999998744 479999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhcc-------CCCCccccccccCceeeCCCCCeEEccccchhhcc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKD-------YVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVG 733 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-------~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~ 733 (876)
++|+|.+++.+. .+++..+.+++.|++.|++|||+. +.++|+||||||+||+++.++.+||+|||+++...
T Consensus 105 ~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~ 182 (322)
T 3soc_A 105 EKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182 (322)
T ss_dssp TTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEEC
T ss_pred CCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccc
Confidence 999999999764 489999999999999999999986 23489999999999999999999999999998776
Q ss_pred ccccccccccccccccccCccccCCC-----CCCCccchHHHHHHHHHHHhCCCCCCCCCcchh-----------hHHHH
Q 002826 734 EAAFQSTMSSEYALSCYNAPEYGYSK-----KATAQMDAYSFGVVLLELITGRQAEQAEPAESL-----------DVVKW 797 (876)
Q Consensus 734 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~-----------~~~~~ 797 (876)
............||+.|+|||.+.+. .++.++|||||||++|||+||+.||........ ....+
T Consensus 183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 262 (322)
T 3soc_A 183 AGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDM 262 (322)
T ss_dssp TTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHH
T ss_pred cccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhh
Confidence 54433334445689999999998763 456678999999999999999999986543211 11111
Q ss_pred HHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 798 VRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 798 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
........ ....+..... ....+..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 263 ~~~~~~~~--~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 263 QEVVVHKK--KRPVLRDYWQ--KHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp HHHHTTSC--CCCCCCGGGG--SSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred hhhhhccc--CCCCcccccc--ccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 11111110 1111111111 1234566899999999999999999999999999987543
No 61
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.6e-38 Score=356.35 Aligned_cols=376 Identities=20% Similarity=0.206 Sum_probs=255.5
Q ss_pred CCCCCCCCCCCCCcc-ccceEecCCCCCccEEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCC
Q 002826 47 SLSTWSNTSNIHYCN-WTGVTCVTTATASLTVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSL 125 (876)
Q Consensus 47 ~~~sW~~~~~~~~C~-w~gv~c~~~~~~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 125 (876)
.+++|... .+||. |.++.|.... +.+............-..++++++|++++|.++...+..|..+++|
T Consensus 2 ~~~~~~~~--~~C~~~~~~~~c~~~~--------~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L 71 (390)
T 3o6n_A 2 NVKPRQPE--YKCIDSNLQYDCVFYD--------VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 71 (390)
T ss_dssp -----CCE--ECBCC------EEEES--------CEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCC
T ss_pred CcCCCCCc--cceehhhhhhccceee--------eeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccC
Confidence 36788654 46664 6666664322 1111111112222223457899999999999998777778999999
Q ss_pred CcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCc-ccc
Q 002826 126 ETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSD-IGK 204 (876)
Q Consensus 126 ~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~-~~~ 204 (876)
++|+|+ +|++++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|+ +..+|.. |.+
T Consensus 72 ~~L~L~----------~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~--l~~l~~~~~~~ 139 (390)
T 3o6n_A 72 ELLNLN----------DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERND--LSSLPRGIFHN 139 (390)
T ss_dssp SEEECT----------TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC--CCCCCTTTTTT
T ss_pred cEEECC----------CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCc--cCcCCHHHhcC
Confidence 988555 455566677899999999999999999999889999999999999999998 6678776 688
Q ss_pred cCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCcccee
Q 002826 205 LEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNL 284 (876)
Q Consensus 205 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 284 (876)
+++|++|++++|++++..|..|.++++|++|++++|+++ .++. ..+++|+.|++++|.+++. ...++|++|
T Consensus 140 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~---~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L 210 (390)
T 3o6n_A 140 TPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDL---SLIPSLFHANVSYNLLSTL-----AIPIAVEEL 210 (390)
T ss_dssp CTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCS-BCCG---GGCTTCSEEECCSSCCSEE-----ECCSSCSEE
T ss_pred CCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCC-cccc---ccccccceeeccccccccc-----CCCCcceEE
Confidence 999999999999999988888999999999999999998 4442 3478888888888887742 334567777
Q ss_pred eeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccC
Q 002826 285 SLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFT 364 (876)
Q Consensus 285 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 364 (876)
++++|.++...... .++|+.|++++|.+++ . ..+..+++|++|++++|+++
T Consensus 211 ~l~~n~l~~~~~~~---~~~L~~L~l~~n~l~~------------------------~--~~l~~l~~L~~L~Ls~n~l~ 261 (390)
T 3o6n_A 211 DASHNSINVVRGPV---NVELTILKLQHNNLTD------------------------T--AWLLNYPGLVEVDLSYNELE 261 (390)
T ss_dssp ECCSSCCCEEECCC---CSSCCEEECCSSCCCC------------------------C--GGGGGCTTCSEEECCSSCCC
T ss_pred ECCCCeeeeccccc---cccccEEECCCCCCcc------------------------c--HHHcCCCCccEEECCCCcCC
Confidence 77777776442211 2345555555555543 2 33445555555555555555
Q ss_pred CCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCC
Q 002826 365 SSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAE 444 (876)
Q Consensus 365 ~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 444 (876)
+..|..+..+++|+.|++++|++++ +|..+..+++|+.|+|++|++++.++.+..+++|++|+|++|+++.. | +..
T Consensus 262 ~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~ 337 (390)
T 3o6n_A 262 KIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTL-K--LST 337 (390)
T ss_dssp EEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCCCCC-C--CCT
T ss_pred CcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcceecCccccccCcCCEEECCCCcccee-C--chh
Confidence 5555555555555555555555553 34445566777777888888876666777788888888888888754 2 667
Q ss_pred CCCcceeeCCCCcccccCCCcccccccceEEccCCccccccCCcccCCCCCccccCCCCCCCCCC
Q 002826 445 LPVLTYLDLSDNNLTGPIPQGLQNLKLALFNVSFNKLSGRVPYSLISGLPASYLQGNPGLCGPGL 509 (876)
Q Consensus 445 l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~l~ls~N~l~~~~p~~~~~~~~~~~~~~N~~~C~~~~ 509 (876)
+++|+.|++++|++++. .....+..+....+.+++..|+++.
T Consensus 338 ~~~L~~L~l~~N~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~c~~~~ 379 (390)
T 3o6n_A 338 HHTLKNLTLSHNDWDCN-----------------------SLRALFRNVARPAVDDADQHCKIDY 379 (390)
T ss_dssp TCCCSEEECCSSCEEHH-----------------------HHHHHTTTCCTTTBCCCCSCCCTTC
T ss_pred hccCCEEEcCCCCccch-----------------------hHHHHHHHHHhhcccccCceecccc
Confidence 77788888888877642 1112233445556778888887653
No 62
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4e-39 Score=352.63 Aligned_cols=271 Identities=18% Similarity=0.152 Sum_probs=212.7
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEEEcC
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
|.....+|.|| ||+||+|.. .+|+.||||++.... ....+.+|+++++++ +||||+++++++...+..++||||+
T Consensus 11 y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 11 FRVGKKIGCGN-FGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp EEEEEECCC-C-TTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred eEEEEEeeccC-CceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 44445555555 999999975 589999999987543 334688999999999 9999999999999999999999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCC-----eEEccccchhhcccc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFE-----PKLTDFALDRIVGEA 735 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~-----~kl~DfGla~~~~~~ 735 (876)
+++|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.....
T Consensus 88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 88 -GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 8999999987666899999999999999999999999 9999999999999998876 999999999876533
Q ss_pred cccc-----ccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchh-hHHHHHHH-Hhhccccc
Q 002826 736 AFQS-----TMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESL-DVVKWVRR-KINITNGA 808 (876)
Q Consensus 736 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~-~~~~~~~~-~~~~~~~~ 808 (876)
.... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ .....+.. .....
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~--- 240 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP--- 240 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC---
T ss_pred CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC---
Confidence 2111 12345689999999999999999999999999999999999999987543322 11111111 10110
Q ss_pred ccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcccccccCCCCC
Q 002826 809 IQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLLSIELSSSQE 871 (876)
Q Consensus 809 ~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~~~~~~~~~~ 871 (876)
.+.... ..+ .+.+++..||+.||.+||++.++.+.|+++..+.........+|+.
T Consensus 241 ----~~~~~~---~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~ 295 (330)
T 2izr_A 241 ----IEVLCE---NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIG 295 (330)
T ss_dssp ----HHHHTT---TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTTT
T ss_pred ----HHHHhc---cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCCC
Confidence 000011 112 6889999999999999999999999999987766554444444443
No 63
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.3e-39 Score=348.33 Aligned_cols=255 Identities=19% Similarity=0.312 Sum_probs=207.0
Q ss_pred cccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCC
Q 002826 584 DEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMG 663 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 663 (876)
.....+|.|| ||+||+++..++..||+|++.... ...+++.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 27 ~~~~~lg~G~-~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 104 (283)
T 3gen_A 27 TFLKELGTGQ-FGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 104 (283)
T ss_dssp EEEEECC----CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTC
T ss_pred HhHhhcCCCC-CceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCC
Confidence 3345555555 999999999889999999997543 45678999999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccccccc
Q 002826 664 SLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSS 743 (876)
Q Consensus 664 sL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~ 743 (876)
+|.+++......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....... .....
T Consensus 105 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~ 180 (283)
T 3gen_A 105 CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVG 180 (283)
T ss_dssp BHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH-HSTTS
T ss_pred cHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccc-ccccC
Confidence 99999987666799999999999999999999999 999999999999999999999999999987654322 22233
Q ss_pred ccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHH
Q 002826 744 EYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQ 822 (876)
Q Consensus 744 ~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 822 (876)
..+|+.|+|||...+..++.++||||+|+++|||+| |+.||........ ...+.. . ... ..+. .
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~--~~~~~~---~---~~~-~~~~------~ 245 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET--AEHIAQ---G---LRL-YRPH------L 245 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HHHHHT---T---CCC-CCCT------T
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH--HHHHhc---c---cCC-CCCC------c
Confidence 446788999999988889999999999999999998 9999976543321 111111 1 000 0111 1
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 823 QMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 823 ~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
....+.+++.+||+.||++|||++|+++.|+++.++.
T Consensus 246 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 246 ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 1235789999999999999999999999999987643
No 64
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4e-39 Score=346.41 Aligned_cols=264 Identities=20% Similarity=0.311 Sum_probs=204.6
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccC---HHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQS---SKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
+.|++.+..|.|+||.||+|+. .+++.||+|++....... .+.+.+|+.++++++||||+++++++.+++..|+||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 3334444444455999999965 479999999986543333 357889999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||+++++|.+++.+.+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 91 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp ECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 9999999999997654 689999999999999999999999 999999999999999999999999999987654321
Q ss_pred ccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 738 QSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
.......||+.|+|||.+.+..++.++||||+|+++|||++|+.||......... ...... ...+...
T Consensus 167 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~-----~~~~~~------~~~~~~~ 234 (294)
T 4eqm_A 167 -TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-----IKHIQD------SVPNVTT 234 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH-----HHHHSS------CCCCHHH
T ss_pred -cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-----HHHhhc------cCCCcch
Confidence 1223345899999999998888999999999999999999999999865433221 111110 0011111
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhcccCCcc
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRP-SMFEVVKALHSLSTRTSL 861 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RP-s~~ell~~L~~i~~~~~~ 861 (876)
......+..+.+++.+|++.||++|| +++++.+.|+.+..+...
T Consensus 235 ~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 235 DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 22223345688999999999999998 999999999998765543
No 65
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.8e-40 Score=365.38 Aligned_cols=261 Identities=22% Similarity=0.356 Sum_probs=196.1
Q ss_pred ccccCCCCCCCCceEEEEEEeC----CCcEEEEEEEecCC-ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP----SGELIAVKKLVNFG-CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
|.....+|.|| ||.||+|+.. ++..||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 47 ~~~~~~lG~G~-fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 125 (373)
T 2qol_A 47 ISIDKVVGAGE-FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125 (373)
T ss_dssp CCCCEEEEECS-SSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred ceeeeEEeeCC-CeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence 33344455554 9999999764 57789999986542 223467889999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||+++|+|.+++.+.+..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 126 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 202 (373)
T 2qol_A 126 EYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202 (373)
T ss_dssp ECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred eCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence 99999999999988777899999999999999999999999 999999999999999999999999999987754321
Q ss_pred c-cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChh
Q 002826 738 Q-STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPK 815 (876)
Q Consensus 738 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 815 (876)
. .......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+....... .
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--~~~~i~~~~~~~------~--- 271 (373)
T 2qol_A 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--VIKAVDEGYRLP------P--- 271 (373)
T ss_dssp -----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--HHHHHHTTEECC------C---
T ss_pred cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCCC------C---
Confidence 1 11222335678999999988889999999999999999998 999997644322 222221111000 0
Q ss_pred hhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCccc
Q 002826 816 IANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLL 862 (876)
Q Consensus 816 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~ 862 (876)
....+..+.+++.+||+.||++||++.|+++.|+++.......
T Consensus 272 ----~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~~~ 314 (373)
T 2qol_A 272 ----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314 (373)
T ss_dssp ----CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGGGG
T ss_pred ----CccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcccc
Confidence 1122346789999999999999999999999999987655433
No 66
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.8e-38 Score=362.77 Aligned_cols=346 Identities=23% Similarity=0.361 Sum_probs=301.8
Q ss_pred cCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCc
Q 002826 96 CELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPF 175 (876)
Q Consensus 96 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 175 (876)
..+++|+.|++++|.+.. +| .+..+++|++|+|++ |++++..| +.++++|++|+|++|++++..+
T Consensus 43 ~~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~----------n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~- 107 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSN----------NQLTDITP--LKNLTKLVDILMNNNQIADITP- 107 (466)
T ss_dssp HHHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCS----------SCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-
T ss_pred hHhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCC----------CccCCchh--hhccccCCEEECCCCccccChh-
Confidence 457899999999999987 45 488899998886555 55554444 9999999999999999997665
Q ss_pred cccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccc
Q 002826 176 VFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLL 255 (876)
Q Consensus 176 ~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~ 255 (876)
++++++|++|+|++|+ +..+|. +.++++|++|++++|++.+. ..+.++++|++|+++ |.+. .++. +..++
T Consensus 108 -~~~l~~L~~L~L~~n~--l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~-~~~~-~~~~--~~~l~ 177 (466)
T 1o6v_A 108 -LANLTNLTGLTLFNNQ--ITDIDP-LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFG-NQVT-DLKP--LANLT 177 (466)
T ss_dssp -GTTCTTCCEEECCSSC--CCCCGG-GTTCTTCSEEEEEEEEECCC--GGGTTCTTCSEEEEE-ESCC-CCGG--GTTCT
T ss_pred -hcCCCCCCEEECCCCC--CCCChH-HcCCCCCCEEECCCCccCCC--hhhccCCcccEeecC-Cccc-Cchh--hccCC
Confidence 9999999999999998 566665 89999999999999999875 358999999999997 6666 3433 45699
Q ss_pred cccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEec
Q 002826 256 KLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAE 335 (876)
Q Consensus 256 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 335 (876)
+|++|++++|++++. ..+..+++|++|++++|.+++..| +..+++|++|++++|++++. ..+..+++|+.|+++
T Consensus 178 ~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~ 251 (466)
T 1o6v_A 178 TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLA 251 (466)
T ss_dssp TCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECC
T ss_pred CCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECC
Confidence 999999999999864 358999999999999999998766 88899999999999999864 468899999999999
Q ss_pred CCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCC
Q 002826 336 SNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQI 415 (876)
Q Consensus 336 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~ 415 (876)
+|++++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..
T Consensus 252 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~ 325 (466)
T 1o6v_A 252 NNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDIS 325 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCG
T ss_pred CCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCch
Confidence 999997766 8899999999999999997554 8899999999999999998665 889999999999999999877
Q ss_pred cCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccc-ccceEEccCCcccc
Q 002826 416 PELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL-KLALFNVSFNKLSG 483 (876)
Q Consensus 416 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~ls~N~l~~ 483 (876)
+ +..+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..+ +++.|++++|++++
T Consensus 326 ~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 326 P-VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp G-GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred h-hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 6 88999999999999999975 579999999999999999998877 6666 58999999999986
No 67
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=357.19 Aligned_cols=253 Identities=23% Similarity=0.331 Sum_probs=194.7
Q ss_pred hhhhhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEE
Q 002826 577 HDLVIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIF 654 (876)
Q Consensus 577 ~~l~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 654 (876)
+++...|.....+|.|+ ||+||+|.. .+|+.||||++..... .....+.+|+++++.++||||+++++++.+.+..+
T Consensus 6 ~~l~~~y~i~~~lG~G~-~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~ 84 (347)
T 3zgw_A 6 DELLKYYELHETIGTGG-FAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIF 84 (347)
T ss_dssp TTTTTTEEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhcCeEEEEEEEcCC-CeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 34444555555566555 999999965 5899999999976432 33457889999999999999999999999999999
Q ss_pred EEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccc
Q 002826 655 LIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGE 734 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 734 (876)
+||||+++|+|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 85 lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 85 MVLEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred EEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 9999999999999997654 699999999999999999999999 999999999999999999999999999876543
Q ss_pred cccccccccccccccccCccccCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccC
Q 002826 735 AAFQSTMSSEYALSCYNAPEYGYSKKA-TAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLD 813 (876)
Q Consensus 735 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 813 (876)
... .......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||....... ....+. ........
T Consensus 161 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~--~~~~i~---~~~~~~p~--- 231 (347)
T 3zgw_A 161 NKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA--LYKKIM---RGKYDVPK--- 231 (347)
T ss_dssp ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH---HTCCCCCT---
T ss_pred CCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHH---cCCCCCCC---
Confidence 221 12334568999999999887765 889999999999999999999998644322 111111 11100111
Q ss_pred hhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 814 PKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 814 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.....+.+++.+||+.||++|||++|+++.
T Consensus 232 --------~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 232 --------WLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp --------TCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --------CCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 112356789999999999999999999975
No 68
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.6e-39 Score=354.43 Aligned_cols=245 Identities=23% Similarity=0.356 Sum_probs=198.4
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEc
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 659 (876)
|.....+|.|| ||.||+|.. .+|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..|+||||
T Consensus 17 y~~~~~lG~G~-~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 95 (328)
T 3fe3_A 17 YRLLKTIGKGN-FAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY 95 (328)
T ss_dssp EEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEeeCC-CEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEEC
Confidence 33344455555 999999976 5899999999975422 2345678999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccc
Q 002826 660 LQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQS 739 (876)
Q Consensus 660 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 739 (876)
+++|+|.+++.+.+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 96 ~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 168 (328)
T 3fe3_A 96 ASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG--- 168 (328)
T ss_dssp CTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC---
T ss_pred CCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC---
Confidence 99999999997654 689999999999999999999999 99999999999999999999999999998765432
Q ss_pred ccccccccccccCccccCCCCCC-CccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 740 TMSSEYALSCYNAPEYGYSKKAT-AQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 740 ~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
......||+.|+|||.+.+..+. .++||||+||++|||++|+.||........ ...+. ...... |
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~i~---~~~~~~-----p---- 234 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL--RERVL---RGKYRI-----P---- 234 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH---HCCCCC-----C----
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHH--HHHHH---hCCCCC-----C----
Confidence 23445699999999998877654 789999999999999999999986543321 11111 111000 0
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
...+..+.+++.+||+.||.+|||++|+++.
T Consensus 235 --~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 235 --FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp --TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred --CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0123357899999999999999999999874
No 69
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.2e-39 Score=347.05 Aligned_cols=270 Identities=14% Similarity=0.118 Sum_probs=211.4
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEEEcC
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
|.....+|.| +||.||+|.. .+|+.||+|++... .....+.+|+.+++.+ +|+|++++++++.+....++||||+
T Consensus 12 y~~~~~lg~G-~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 12 YKVGRRIGEG-SFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp EEEEEEEEEC-SSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred eEEEEEEeec-CCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 3333445544 5999999975 58999999998653 3345688999999999 7999999999999999999999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCC-----eEEccccchhhcccc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFE-----PKLTDFALDRIVGEA 735 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~-----~kl~DfGla~~~~~~ 735 (876)
+++|.+++...+..+++..+.+++.|++.|++|||+. +|+||||||+||+++.++. +||+|||+++.....
T Consensus 89 -~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 89 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred -CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 8899999987776799999999999999999999999 9999999999999987765 999999999877543
Q ss_pred ccc-----cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchh-hHHHHHHHHhhcccccc
Q 002826 736 AFQ-----STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESL-DVVKWVRRKINITNGAI 809 (876)
Q Consensus 736 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 809 (876)
... .......||+.|+|||...+..++.++||||||+++|||++|+.||........ .....+......
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~----- 239 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS----- 239 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH-----
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC-----
Confidence 221 123445689999999999988899999999999999999999999987543221 111111111100
Q ss_pred cccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcccccccCC
Q 002826 810 QVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLLSIELSS 868 (876)
Q Consensus 810 ~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~~~~~~~ 868 (876)
+.........+..+.+++.+||+.||++|||++++++.|+++.++.........+
T Consensus 240 ----~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~d 294 (298)
T 1csn_A 240 ----TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFD 294 (298)
T ss_dssp ----SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCG
T ss_pred ----ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCccc
Confidence 0011111123456889999999999999999999999999998765544333333
No 70
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.9e-40 Score=369.71 Aligned_cols=255 Identities=22% Similarity=0.367 Sum_probs=205.1
Q ss_pred cCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCC
Q 002826 586 KSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMG 663 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 663 (876)
...+|.|+ ||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++.+++..++||||+++|
T Consensus 119 ~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 119 GEQIGRGN-FGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEET-TEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred eeEeccCC-CCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 34455555 9999999876 799999999865321 22346788999999999999999999999999999999999999
Q ss_pred CHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccccccc
Q 002826 664 SLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSS 743 (876)
Q Consensus 664 sL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~ 743 (876)
+|.+++...+..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.............
T Consensus 198 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~ 274 (377)
T 3cbl_A 198 DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL 274 (377)
T ss_dssp BHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSC
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCC
Confidence 99999987766799999999999999999999999 999999999999999999999999999986544322222222
Q ss_pred ccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHH
Q 002826 744 EYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQ 822 (876)
Q Consensus 744 ~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 822 (876)
..++..|+|||.+....++.++|||||||++|||+| |+.||....... ..+.+....... .| ..
T Consensus 275 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--~~~~~~~~~~~~-------~~------~~ 339 (377)
T 3cbl_A 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--TREFVEKGGRLP-------CP------EL 339 (377)
T ss_dssp CEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--HHHHHHTTCCCC-------CC------TT
T ss_pred CCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCCC-------CC------CC
Confidence 335778999999888889999999999999999998 999997644322 222222111000 01 11
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 823 QMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 823 ~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
.+..+.+++.+||+.||++|||++|+++.|+++.++.
T Consensus 340 ~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 340 CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 2335789999999999999999999999999987643
No 71
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.2e-40 Score=358.62 Aligned_cols=264 Identities=24% Similarity=0.329 Sum_probs=201.5
Q ss_pred ccccCCCCCCCCceEEEEEEe-----CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEe--CCeEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-----PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHS--DESIFL 655 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 655 (876)
.+++.+..|.|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....++
T Consensus 11 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 90 (295)
T 3ugc_A 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90 (295)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEE
T ss_pred HhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEE
Confidence 334444444455999999973 4789999999976554555788999999999999999999999865 356899
Q ss_pred EEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccc
Q 002826 656 IYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEA 735 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 735 (876)
||||+++|+|.+++......+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 91 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 9999999999999988766799999999999999999999999 9999999999999999999999999999877543
Q ss_pred ccc-cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchh----------hHHHHHHHHhhc
Q 002826 736 AFQ-STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESL----------DVVKWVRRKINI 804 (876)
Q Consensus 736 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~----------~~~~~~~~~~~~ 804 (876)
... .......++..|+|||.+.+..++.++||||||+++|||+||..||.....+.. ............
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 221 222334477789999999888899999999999999999999999875332211 000011110000
Q ss_pred ccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 805 TNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 805 ~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
. ... ......+..+.+++.+||+.||++|||++|+++.|+++.++
T Consensus 248 ~--~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 248 N--GRL-------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp T--CCC-------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred c--CcC-------CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 0 000 00112234688999999999999999999999999998754
No 72
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=366.79 Aligned_cols=336 Identities=19% Similarity=0.176 Sum_probs=200.6
Q ss_pred CCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCcccc
Q 002826 99 SSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFG 178 (876)
Q Consensus 99 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 178 (876)
+++++|+|++|++++..|..|.++++|++|+|+ +|.+++..|..|.++++|++|+|++|++++..+..|.
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~----------~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 101 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELN----------ENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFT 101 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECT----------TSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSST
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECC----------CCccCEeChhhhhCCccCCEEECCCCcCCccCccccc
Confidence 477888888888888777788888888776444 4455566677788888888888888888766666777
Q ss_pred CCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCcccccccccc
Q 002826 179 NFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLV 258 (876)
Q Consensus 179 ~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~ 258 (876)
++++|++|+|++|++ ....|..|.++++|++|+|++|++++..+..|.++++|++|+|++|+++ .+|...+..+++|+
T Consensus 102 ~l~~L~~L~Ls~n~i-~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~l~~l~~L~ 179 (477)
T 2id5_A 102 GLSNLTKLDISENKI-VILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT-SIPTEALSHLHGLI 179 (477)
T ss_dssp TCTTCCEEECTTSCC-CEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS-SCCHHHHTTCTTCC
T ss_pred CCCCCCEEECCCCcc-ccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc-ccChhHhcccCCCc
Confidence 777777777777762 3333455666666666666666666666666666666666666666666 44444444455666
Q ss_pred EEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCc
Q 002826 259 SFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNR 338 (876)
Q Consensus 259 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 338 (876)
.|+|++|++.+..+..|..+++|+.|++++|.+.+.+| .......+|+.|++++|+
T Consensus 180 ~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~------------------------~~~~~~~~L~~L~l~~n~ 235 (477)
T 2id5_A 180 VLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMT------------------------PNCLYGLNLTSLSITHCN 235 (477)
T ss_dssp EEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEEC------------------------TTTTTTCCCSEEEEESSC
T ss_pred EEeCCCCcCcEeChhhcccCcccceeeCCCCccccccC------------------------cccccCccccEEECcCCc
Confidence 66666665555555555555555555555554444444 433334455555555555
Q ss_pred ccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCc-C
Q 002826 339 FSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIP-E 417 (876)
Q Consensus 339 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~ 417 (876)
+++..+..+..+++|+.|+|++|++++..+..|.++++|+.|++++|++++..|..|.++++|+.|+|++|+|++.++ .
T Consensus 236 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 315 (477)
T 2id5_A 236 LTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESV 315 (477)
T ss_dssp CCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGG
T ss_pred ccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhH
Confidence 554444445555555555555555555555555555555555666665555555666666666666666666665555 4
Q ss_pred cccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccccc
Q 002826 418 LKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNLKL 471 (876)
Q Consensus 418 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l 471 (876)
|..+++|++|+|++|.++..-+. ..-...+..+++.+|.....-|..+.+..+
T Consensus 316 ~~~l~~L~~L~l~~N~l~c~c~~-~~~~~~~~~~~~~~~~~~C~~p~~~~g~~l 368 (477)
T 2id5_A 316 FHSVGNLETLILDSNPLACDCRL-LWVFRRRWRLNFNRQQPTCATPEFVQGKEF 368 (477)
T ss_dssp BSCGGGCCEEECCSSCEECSGGG-HHHHTTTTSSCCTTCCCBEEESGGGTTCBG
T ss_pred cCCCcccCEEEccCCCccCccch-HhHHhhhhccccCccCceeCCchHHcCCch
Confidence 56666666666666666532211 000112233445555555445555554433
No 73
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.1e-39 Score=353.45 Aligned_cols=253 Identities=20% Similarity=0.272 Sum_probs=202.6
Q ss_pred hhhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCcc------CHHHHHHHHHHHhhccCccccceeeEEEeC
Q 002826 578 DLVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQ------SSKTLKTEVKTLAKIRHKNIVKVLGFFHSD 650 (876)
Q Consensus 578 ~l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 650 (876)
++...|.....+|.|+ ||+||+|... +|+.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.
T Consensus 9 ~~~~~y~~~~~LG~G~-fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 87 (361)
T 2yab_A 9 KVEDFYDIGEELGSGQ-FAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENR 87 (361)
T ss_dssp CGGGTEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred ChhhceEEeeEEeeCc-CEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeC
Confidence 3444444445555555 9999999765 7999999999764322 357889999999999999999999999999
Q ss_pred CeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCC----CeEEccc
Q 002826 651 ESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADF----EPKLTDF 726 (876)
Q Consensus 651 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~----~~kl~Df 726 (876)
+..|+||||+++|+|.+++... ..+++..+..++.||+.|++|||+. +|+||||||+||+++.++ .+||+||
T Consensus 88 ~~~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 88 TDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp SEEEEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred CEEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 9999999999999999999764 4799999999999999999999999 999999999999998776 7999999
Q ss_pred cchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccc
Q 002826 727 ALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITN 806 (876)
Q Consensus 727 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 806 (876)
|+++...... ......||+.|+|||++.+..++.++||||+||++|||++|++||........ .. ......
T Consensus 164 G~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~--~~---~i~~~~- 234 (361)
T 2yab_A 164 GLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET--LA---NITAVS- 234 (361)
T ss_dssp SSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH--HH---HHHTTC-
T ss_pred CCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH--HH---HHHhcC-
Confidence 9998765432 23345699999999999988899999999999999999999999986543221 11 111111
Q ss_pred ccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 807 GAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 807 ~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
..+++.. +......+.+++.+||..||++|||+.|+++
T Consensus 235 ---~~~~~~~---~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 235 ---YDFDEEF---FSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ---CCCCHHH---HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---CCCCchh---ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0111111 1223346789999999999999999999986
No 74
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=362.35 Aligned_cols=261 Identities=25% Similarity=0.359 Sum_probs=208.2
Q ss_pred cccCCCCCCCCceEEEEEEe--------CCCcEEEEEEEecCCc-cCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeE
Q 002826 584 DEKSSAGNGGPFGRVYILSL--------PSGELIAVKKLVNFGC-QSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESI 653 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~--------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 653 (876)
+.+.+..|.|+||+||+|+. .++..||+|++..... .....+.+|+++++++ +||||+++++++.+++..
T Consensus 71 y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~ 150 (382)
T 3tt0_A 71 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL 150 (382)
T ss_dssp EEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred eEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCce
Confidence 33434444445999999975 2346899999975432 2236788999999999 999999999999999999
Q ss_pred EEEEEcCCCCCHHHHhhccC---------------CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCC
Q 002826 654 FLIYEFLQMGSLGDLICRQD---------------FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDAD 718 (876)
Q Consensus 654 ~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~ 718 (876)
++||||+++|+|.+++.... ..+++..+.+++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 151 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 151 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTED 227 (382)
T ss_dssp EEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTT
T ss_pred EEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEcCC
Confidence 99999999999999997653 3589999999999999999999999 99999999999999999
Q ss_pred CCeEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHH
Q 002826 719 FEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKW 797 (876)
Q Consensus 719 ~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~ 797 (876)
+.+||+|||+++...............+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....... ....
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~--~~~~ 305 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--LFKL 305 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHH
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH
Confidence 9999999999987765433333445567889999999988899999999999999999999 999997654332 2222
Q ss_pred HHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCccc
Q 002826 798 VRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLL 862 (876)
Q Consensus 798 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~ 862 (876)
+...... .. .......+.+++.+||+.||++|||++|+++.|+++.......
T Consensus 306 ~~~~~~~------~~-------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 357 (382)
T 3tt0_A 306 LKEGHRM------DK-------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 357 (382)
T ss_dssp HHTTCCC------CC-------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSC
T ss_pred HHcCCCC------CC-------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcC
Confidence 2211100 00 0112346789999999999999999999999999997655444
No 75
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=358.46 Aligned_cols=259 Identities=26% Similarity=0.438 Sum_probs=205.1
Q ss_pred ccccCCCCCCCCceEEEEEEeC------CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP------SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFL 655 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 655 (876)
|.....+|.|+ ||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++
T Consensus 49 ~~~~~~lg~G~-~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 127 (343)
T 1luf_A 49 IEYVRDIGEGA-FGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL 127 (343)
T ss_dssp CEEEEEEEECS-SCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred CeeeeeeeecC-CeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEE
Confidence 33344555555 9999999763 358999999875432 224678899999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHhhccC-----------------------CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCc
Q 002826 656 IYEFLQMGSLGDLICRQD-----------------------FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKN 712 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~N 712 (876)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~N 204 (343)
T 1luf_A 128 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRN 204 (343)
T ss_dssp EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred EEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcce
Confidence 999999999999997642 5689999999999999999999999 99999999999
Q ss_pred eeeCCCCCeEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcch
Q 002826 713 ILLDADFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAES 791 (876)
Q Consensus 713 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~ 791 (876)
|+++.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......
T Consensus 205 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 284 (343)
T 1luf_A 205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE 284 (343)
T ss_dssp EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred EEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH
Confidence 9999999999999999988764433333445568889999999888889999999999999999999 999997644322
Q ss_pred hhHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 792 LDVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
....+.. .. .... ....+..+.+++.+||+.||++|||+.|+++.|+++.++..
T Consensus 285 --~~~~~~~---~~---~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 285 --VIYYVRD---GN---ILAC-------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp --HHHHHHT---TC---CCCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred --HHHHHhC---CC---cCCC-------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 1221111 10 0001 11223467899999999999999999999999999987654
No 76
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-39 Score=352.18 Aligned_cols=250 Identities=20% Similarity=0.282 Sum_probs=202.2
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
.|.....+|.|+ ||+||+|... +++.||+|++.... .....+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 6 ~y~~~~~lG~G~-~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 6 KYMIAEDLGRGE-FGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred ceEeeeEEecCC-CeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 444445555555 9999999765 78999999986432 34567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC--CCCeEEccccchhhccccccc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA--DFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~--~~~~kl~DfGla~~~~~~~~~ 738 (876)
++|+|.+++......+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 84 ~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~- 159 (321)
T 1tki_A 84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN- 159 (321)
T ss_dssp CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE-
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc-
Confidence 99999999987766799999999999999999999999 9999999999999987 78999999999987654322
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
.....||+.|+|||.+.+..++.++||||+|+++|||++|+.||....... ....+.. .. . .+++.
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~---~~---~-~~~~~--- 225 (321)
T 1tki_A 160 --FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ--IIENIMN---AE---Y-TFDEE--- 225 (321)
T ss_dssp --EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHH---TC---C-CCCHH---
T ss_pred --cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH--HHHHHHc---CC---C-CCChh---
Confidence 233458999999999988888999999999999999999999998654322 1111111 11 0 01111
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.+...+..+.+++.+|++.||++|||+.|+++.
T Consensus 226 ~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111224467899999999999999999999983
No 77
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.8e-39 Score=349.68 Aligned_cols=259 Identities=25% Similarity=0.386 Sum_probs=199.3
Q ss_pred cCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCC
Q 002826 586 KSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMG 663 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 663 (876)
...+|.|| ||+||+|... ..+|+|+++.... ...+.+.+|++++++++||||+++++++. .+..++||||++++
T Consensus 41 ~~~lG~G~-~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~ 116 (307)
T 3lb7_A 41 STRIGSGS-FGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEEEECS-SCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EeEecCCC-CeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCC
Confidence 34455555 9999999863 4689998865332 22357889999999999999999999875 45688999999999
Q ss_pred CHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccccccc
Q 002826 664 SLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSS 743 (876)
Q Consensus 664 sL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~ 743 (876)
+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.............
T Consensus 117 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~ 193 (307)
T 3lb7_A 117 SLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193 (307)
T ss_dssp BHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC------------
T ss_pred cHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccccccccC
Confidence 99999987777899999999999999999999999 999999999999999999999999999986543222223344
Q ss_pred ccccccccCccccC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhc
Q 002826 744 EYALSCYNAPEYGY---SKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCY 820 (876)
Q Consensus 744 ~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 820 (876)
..||+.|+|||.+. ...++.++||||||+++|||++|+.||........ .......... .+.+....
T Consensus 194 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~~~~~---------~~~~~~~~ 263 (307)
T 3lb7_A 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRGYA---------SPDLSKLY 263 (307)
T ss_dssp CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHHTCC---------CCCSTTSC
T ss_pred CCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH-HHHHHhcCCC---------Ccchhhhh
Confidence 56899999999875 56688899999999999999999999986544322 2222221111 11111112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcc
Q 002826 821 QQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSL 861 (876)
Q Consensus 821 ~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~ 861 (876)
...+..+.+++.+||+.+|++|||+.|+++.|+.+....+.
T Consensus 264 ~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk 304 (307)
T 3lb7_A 264 KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp SSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred cCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence 22334688999999999999999999999999998766543
No 78
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=6.9e-39 Score=355.62 Aligned_cols=278 Identities=13% Similarity=0.110 Sum_probs=205.8
Q ss_pred cccccCCCCCCCCceEEEEEEeCC------CcEEEEEEEecCCccC-----------HHHHHHHHHHHhhccCcccccee
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLPS------GELIAVKKLVNFGCQS-----------SKTLKTEVKTLAKIRHKNIVKVL 644 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~~~ 644 (876)
+|.....+|.|| ||+||+|.... ++.||||++....... ...+..|+..++.++||||++++
T Consensus 36 ~y~~~~~lG~G~-~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 36 AWKVGLPIGQGG-FGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp EEEEEEECCCC--CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred eEEEEEEEecCC-CeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 444445555555 99999997754 4789999986543211 11233455666777899999999
Q ss_pred eEEEeC----CeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeC--CC
Q 002826 645 GFFHSD----ESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLD--AD 718 (876)
Q Consensus 645 ~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~--~~ 718 (876)
+++... ...|+||||+ +++|.+++......+++..+..++.|++.||+|||+. +|+||||||+|||++ .+
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~ 190 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNP 190 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCT
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCC
Confidence 999774 4589999999 9999999988767899999999999999999999999 999999999999998 88
Q ss_pred CCeEEccccchhhcccccccc-----ccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhh
Q 002826 719 FEPKLTDFALDRIVGEAAFQS-----TMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLD 793 (876)
Q Consensus 719 ~~~kl~DfGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~ 793 (876)
+.+||+|||+++.+....... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||........
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~- 269 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK- 269 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH-
T ss_pred CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH-
Confidence 999999999998765432211 11334589999999999998899999999999999999999999985333322
Q ss_pred HHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcccccccCCC
Q 002826 794 VVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLLSIELSSS 869 (876)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~~~~~~~~ 869 (876)
........... .....+++.+. ....+..+.+++..||+.+|++||++.++++.|+++.++.........+|
T Consensus 270 ~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw 341 (364)
T 3op5_A 270 YVRDSKIRYRE--NIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDL 341 (364)
T ss_dssp HHHHHHHHHHH--CHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCCCC
T ss_pred HHHHHHHHhhh--hHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCccce
Confidence 22222211111 01111111110 01224568899999999999999999999999999877655544333333
No 79
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.2e-39 Score=351.77 Aligned_cols=252 Identities=21% Similarity=0.316 Sum_probs=200.8
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEc
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 659 (876)
+|.....+|.|+ ||+||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+++..|+||||
T Consensus 8 ~y~i~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 8 DWDLVQTLGEGA-YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp CEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hceeeeEEecCC-CEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 444455566555 9999999765 899999999865432 2346688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccc
Q 002826 660 LQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQS 739 (876)
Q Consensus 660 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 739 (876)
+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 87 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 87 CSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred CCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 9999999998654 3699999999999999999999999 99999999999999999999999999998765433333
Q ss_pred ccccccccccccCccccCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 740 TMSSEYALSCYNAPEYGYSKKA-TAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 740 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||............+...... .. .
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--------~~-~--- 230 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--------LN-P--- 230 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT--------ST-T---
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc--------CC-c---
Confidence 3445679999999999876654 778999999999999999999998765544333333221100 00 0
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
+......+.+++.+||+.||++|||+.|+++.
T Consensus 231 -~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 -WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp -GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11223456789999999999999999999875
No 80
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.3e-38 Score=345.22 Aligned_cols=265 Identities=23% Similarity=0.335 Sum_probs=201.5
Q ss_pred hhhhcccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCcc--CHHHHHHHHHHHhhccCccccceeeEEEeCCeEEE
Q 002826 578 DLVIGMDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQ--SSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFL 655 (876)
Q Consensus 578 ~l~~~~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 655 (876)
.+...|.....+|.|+ ||+||+|+..+|+.||+|++...... ....+.+|++++++++||||+++++++.+++..++
T Consensus 18 ~l~~~y~~~~~lG~G~-~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGT-YGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp CSSCEEEEEEEEEECS-SCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred chHhhhHhhhhccCCC-CeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 3344555555666655 99999999888999999999654322 23678899999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccc
Q 002826 656 IYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEA 735 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 735 (876)
||||+++ ++.+++......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..+..
T Consensus 97 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 97 VFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp EEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred EEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 9999986 89888887777799999999999999999999999 9999999999999999999999999999876533
Q ss_pred ccccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccc-cc----
Q 002826 736 AFQSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNG-AI---- 809 (876)
Q Consensus 736 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~---- 809 (876)
. .......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||........ .............. ..
T Consensus 173 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~ 249 (311)
T 3niz_A 173 V--RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIFSILGTPNPREWPQVQE 249 (311)
T ss_dssp C--C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHHHHHCCCCTTTSGGGTT
T ss_pred c--ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHHCCCChHHhhhhhc
Confidence 2 12334458999999998875 5689999999999999999999999987544332 22221111110000 00
Q ss_pred ---------cccC-hhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 810 ---------QVLD-PKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 810 ---------~~~d-~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
...+ ............++.+++.+|++.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000 0011111223346789999999999999999999987
No 81
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=361.25 Aligned_cols=257 Identities=24% Similarity=0.343 Sum_probs=203.9
Q ss_pred ccCCCCCCCCceEEEEEEe------CCCcEEEEEEEecCC-ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 585 EKSSAGNGGPFGRVYILSL------PSGELIAVKKLVNFG-CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
....+|.|| ||+||+|.+ .+++.||||++.... ......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 75 ~~~~LG~G~-fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 153 (367)
T 3l9p_A 75 LIRGLGHGA-FGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILL 153 (367)
T ss_dssp EEEECCCCS-SSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred EeeEeeeCC-CEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEE
Confidence 344455555 999999974 256789999986432 233456889999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccC------CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCC---CeEEccccc
Q 002826 658 EFLQMGSLGDLICRQD------FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADF---EPKLTDFAL 728 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~---~~kl~DfGl 728 (876)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+
T Consensus 154 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DFG~ 230 (367)
T 3l9p_A 154 ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 230 (367)
T ss_dssp ECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred EeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCCcc
Confidence 9999999999997643 4589999999999999999999999 999999999999999554 599999999
Q ss_pred hhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccc
Q 002826 729 DRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNG 807 (876)
Q Consensus 729 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 807 (876)
++...............||+.|+|||.+.+..++.++|||||||++|||++ |+.||....... ....+......
T Consensus 231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~--~~~~i~~~~~~--- 305 (367)
T 3l9p_A 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGRM--- 305 (367)
T ss_dssp HHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHHHTTCCC---
T ss_pred ccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCC---
Confidence 987654433333444557889999999988889999999999999999998 999997654322 22222211100
Q ss_pred cccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 808 AIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 808 ~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
.. .......+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 306 ---~~-------~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 306 ---DP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp ---CC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred ---CC-------CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 00 11123357899999999999999999999999999876443
No 82
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.1e-38 Score=344.31 Aligned_cols=260 Identities=23% Similarity=0.300 Sum_probs=198.4
Q ss_pred cccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhh--ccCccccceeeEEEeC----CeEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAK--IRHKNIVKVLGFFHSD----ESIFL 655 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~----~~~~l 655 (876)
+|.....+|.|| ||+||+|+. +|+.||||++.. .....+.+|.+++.. ++||||+++++++.+. ...++
T Consensus 9 ~y~~~~~lg~G~-~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 9 DITLLECVGKGR-YGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GCEEEEEEEECS-SEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred cEEEEEeeccCC-CcEEEEEEE-CCEEEEEEEecc---ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 344445555555 999999987 799999999864 344556667777766 7999999999997653 45899
Q ss_pred EEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhh--------ccCCCCccccccccCceeeCCCCCeEEcccc
Q 002826 656 IYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLH--------KDYVPHLLHRNVKSKNILLDADFEPKLTDFA 727 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfG 727 (876)
||||+++|+|.+++.. ..+++..+.+++.|++.|++||| +. +|+||||||+||+++.++.+||+|||
T Consensus 84 v~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg 158 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLG 158 (301)
T ss_dssp EECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCT
T ss_pred ehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCC
Confidence 9999999999999954 36899999999999999999999 77 99999999999999999999999999
Q ss_pred chhhccccccc--cccccccccccccCccccCCC------CCCCccchHHHHHHHHHHHhC----------CCCCCCCCc
Q 002826 728 LDRIVGEAAFQ--STMSSEYALSCYNAPEYGYSK------KATAQMDAYSFGVVLLELITG----------RQAEQAEPA 789 (876)
Q Consensus 728 la~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~SlGv~l~elltg----------~~p~~~~~~ 789 (876)
+++........ .......||+.|+|||.+.+. .++.++||||||+++|||+|| +.||.....
T Consensus 159 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~ 238 (301)
T 3q4u_A 159 LAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP 238 (301)
T ss_dssp TCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCC
Confidence 99776543221 112334689999999998766 345789999999999999999 888866444
Q ss_pred chhhHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002826 790 ESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSL 855 (876)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i 855 (876)
................ ....+.+. .........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 239 NDPSFEDMRKVVCVDQ--QRPNIPNR--WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SSCCHHHHHHHHTTSC--CCCCCCGG--GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcchhhhhHHHhccC--CCCCCChh--hccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 3332222222111110 11111111 12234566789999999999999999999999999986
No 83
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=354.82 Aligned_cols=265 Identities=20% Similarity=0.279 Sum_probs=211.8
Q ss_pred cccccccchhhhhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeE
Q 002826 568 FFYPLRVTEHDLVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGF 646 (876)
Q Consensus 568 ~~~~~~~~~~~l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 646 (876)
...+..+..+++...|.....+|.|+ ||+||+|... +|+.||+|++..........+.+|+++++.++||||++++++
T Consensus 38 ~~~~~~~~~~~~~~~y~i~~~LG~G~-~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~ 116 (387)
T 1kob_A 38 VPQPVEVKQGSVYDYYDILEELGSGA-FGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116 (387)
T ss_dssp CCCCCCCBCSCGGGTEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEE
T ss_pred CCCcccccCCccccceEEEEEEecCC-CEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEE
Confidence 34455566666666666666666665 9999999664 799999999976544455678999999999999999999999
Q ss_pred EEeCCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC--CCCeEEc
Q 002826 647 FHSDESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA--DFEPKLT 724 (876)
Q Consensus 647 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~--~~~~kl~ 724 (876)
+.+.+..++||||+++|+|.+++...+..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 117 ~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~ 193 (387)
T 1kob_A 117 FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKII 193 (387)
T ss_dssp EECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEEC
T ss_pred EEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEE
Confidence 9999999999999999999999987766899999999999999999999999 9999999999999974 5789999
Q ss_pred cccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhc
Q 002826 725 DFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINI 804 (876)
Q Consensus 725 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 804 (876)
|||+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+...
T Consensus 194 DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~--~~~~i~~~--- 265 (387)
T 1kob_A 194 DFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE--TLQNVKRC--- 265 (387)
T ss_dssp CCTTCEECCTTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHHC---
T ss_pred ecccceecCCCcc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH--HHHHHHhC---
Confidence 9999987654322 223358999999999998889999999999999999999999998644321 12211111
Q ss_pred ccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 805 TNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 805 ~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
. . .+++.. .......+.+++.+||+.||++|||+.|+++.
T Consensus 266 ~---~-~~~~~~---~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 266 D---W-EFDEDA---FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp C---C-CCCSST---TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred C---C-CCCccc---cccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0 0 011111 11223467899999999999999999999874
No 84
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.3e-38 Score=342.64 Aligned_cols=245 Identities=25% Similarity=0.343 Sum_probs=201.6
Q ss_pred cCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCCC
Q 002826 586 KSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMGS 664 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 664 (876)
...+|.|| ||.||+|+.. +|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 50 ~~~lg~G~-~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 128 (321)
T 2c30_A 50 YVKIGEGS-TGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEEET-TEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCB
T ss_pred cEEeccCC-CeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCC
Confidence 34566665 9999999775 799999999987666667889999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccccccc
Q 002826 665 LGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSSE 744 (876)
Q Consensus 665 L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 744 (876)
|.+++.+. .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....... .....
T Consensus 129 L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~ 201 (321)
T 2c30_A 129 LTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KRKSL 201 (321)
T ss_dssp HHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--CBCCC
T ss_pred HHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc--ccccc
Confidence 99998653 589999999999999999999999 999999999999999999999999999887654321 22345
Q ss_pred cccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHHHH
Q 002826 745 YALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQM 824 (876)
Q Consensus 745 ~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 824 (876)
.||+.|+|||...+..++.++||||||+++|||++|+.||....... ........ . .+... ......
T Consensus 202 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~--~~~~~~~~---~-------~~~~~-~~~~~~ 268 (321)
T 2c30_A 202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKRLRDS---P-------PPKLK-NSHKVS 268 (321)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHS---S-------CCCCT-TGGGSC
T ss_pred cCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHhcC---C-------CCCcC-ccccCC
Confidence 68999999999998889999999999999999999999997643322 12221111 0 00000 011123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 825 LGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 825 ~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
..+.+++.+||+.||++|||+.|+++.
T Consensus 269 ~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 269 PVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 457899999999999999999999985
No 85
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.9e-39 Score=359.63 Aligned_cols=256 Identities=25% Similarity=0.364 Sum_probs=202.6
Q ss_pred ccCCCCCCCCceEEEEEEe------CCCcEEEEEEEecCCc-cCHHHHHHHHHHHhhc-cCccccceeeEEEeCC-eEEE
Q 002826 585 EKSSAGNGGPFGRVYILSL------PSGELIAVKKLVNFGC-QSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDE-SIFL 655 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~-~~~l 655 (876)
....+|.|| ||.||+|++ .+++.||||++..... ...+.+.+|+++++++ +||||+++++++.+.+ ..++
T Consensus 26 ~~~~lG~G~-~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~i 104 (359)
T 3vhe_A 26 LGKPLGRGA-FGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 104 (359)
T ss_dssp EEEEEEECS-SEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEE
T ss_pred eceeecCCC-CceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEE
Confidence 334455555 999999963 3568999999975432 2235688999999999 7999999999998755 4899
Q ss_pred EEEcCCCCCHHHHhhccCC-------------------------------------------------------------
Q 002826 656 IYEFLQMGSLGDLICRQDF------------------------------------------------------------- 674 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~~------------------------------------------------------------- 674 (876)
||||+++|+|.+++.....
T Consensus 105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (359)
T 3vhe_A 105 IVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPED 184 (359)
T ss_dssp EEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------C
T ss_pred EEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccc
Confidence 9999999999999976432
Q ss_pred ----cCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccccccccccccc
Q 002826 675 ----QLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSSEYALSCY 750 (876)
Q Consensus 675 ----~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y 750 (876)
.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...............||+.|
T Consensus 185 ~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y 261 (359)
T 3vhe_A 185 LYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 261 (359)
T ss_dssp TTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGG
T ss_pred hhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCcee
Confidence 189999999999999999999999 9999999999999999999999999999876544333344455688999
Q ss_pred cCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHH
Q 002826 751 NAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALE 829 (876)
Q Consensus 751 ~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 829 (876)
+|||.+.+..++.++||||||+++|||+| |+.||........ ............ . + ......+.+
T Consensus 262 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~~~~~~~~~--~-----~------~~~~~~l~~ 327 (359)
T 3vhe_A 262 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLKEGTRMR--A-----P------DYTTPEMYQ 327 (359)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HHHHHHHTCCCC--C-----C------TTCCHHHHH
T ss_pred EChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HHHHHHcCCCCC--C-----C------CCCCHHHHH
Confidence 99999988889999999999999999998 9999987554332 122221111000 0 0 112235789
Q ss_pred HHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 830 IALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 830 li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
++.+||+.||++|||+.|+++.|+++.+.
T Consensus 328 li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 328 TMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999998754
No 86
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=344.50 Aligned_cols=254 Identities=20% Similarity=0.274 Sum_probs=202.5
Q ss_pred hhhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCcc------CHHHHHHHHHHHhhccCccccceeeEEEeC
Q 002826 578 DLVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQ------SSKTLKTEVKTLAKIRHKNIVKVLGFFHSD 650 (876)
Q Consensus 578 ~l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 650 (876)
++...|.....+|.|+ ||.||+|... +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.
T Consensus 8 ~~~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 86 (326)
T 2y0a_A 8 NVDDYYDTGEELGSGQ-FAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK 86 (326)
T ss_dssp CHHHHEEEEEEEECCS-SEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred CcccceEeceEEeeCC-CeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence 3444444445555555 9999999765 7999999999754322 357899999999999999999999999999
Q ss_pred CeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCC----CeEEccc
Q 002826 651 ESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADF----EPKLTDF 726 (876)
Q Consensus 651 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~----~~kl~Df 726 (876)
+..++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 87 TDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp SEEEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred CEEEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 9999999999999999999764 4689999999999999999999999 999999999999998877 8999999
Q ss_pred cchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccc
Q 002826 727 ALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITN 806 (876)
Q Consensus 727 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 806 (876)
|+++...... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||....... ....+.. ..
T Consensus 163 g~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~~~~---~~- 233 (326)
T 2y0a_A 163 GLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLANVSA---VN- 233 (326)
T ss_dssp TTCEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHH---TC-
T ss_pred CCCeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHHh---cC-
Confidence 9998765332 2234468999999999988889999999999999999999999997644322 1111111 10
Q ss_pred ccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 807 GAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 807 ~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
. ...+. .+......+.+++.+||+.||++|||+.|+++.
T Consensus 234 --~-~~~~~---~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 234 --Y-EFEDE---YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp --C-CCCHH---HHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred --C-CcCcc---ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 01111 111223467899999999999999999999973
No 87
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=5.1e-39 Score=344.82 Aligned_cols=266 Identities=25% Similarity=0.343 Sum_probs=195.5
Q ss_pred hhhhhcccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEE
Q 002826 577 HDLVIGMDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIF 654 (876)
Q Consensus 577 ~~l~~~~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 654 (876)
.|+..+.+.+.+..|.|+||+||+|+.. ..||+|++..... ...+.+.+|++++++++||||+++++++ ..+..+
T Consensus 19 ~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~ 95 (289)
T 3og7_A 19 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA 95 (289)
T ss_dssp CBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCE
T ss_pred CccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccE
Confidence 4555544454444455559999999863 4699999865432 2235788999999999999999999965 456789
Q ss_pred EEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccc
Q 002826 655 LIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGE 734 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 734 (876)
+||||+++++|.+++......+++..+.+++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 96 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccc
Confidence 99999999999999987777899999999999999999999999 999999999999999999999999999987653
Q ss_pred cccccccccccccccccCccccC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccc
Q 002826 735 AAFQSTMSSEYALSCYNAPEYGY---SKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQV 811 (876)
Q Consensus 735 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (876)
...........||+.|+|||.+. ...++.++||||+|+++|||++|+.||....... ..........
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~--------- 242 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMVGRGS--------- 242 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHHHHTS---------
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHhcccc---------
Confidence 32223334456899999999876 5667889999999999999999999998654332 2222222211
Q ss_pred cChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 812 LDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 812 ~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
..+.........+..+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 243 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~e 289 (289)
T 3og7_A 243 LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289 (289)
T ss_dssp CCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTCC
T ss_pred cCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhhC
Confidence 11111112223345688999999999999999999999999998753
No 88
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.3e-38 Score=339.28 Aligned_cols=249 Identities=25% Similarity=0.402 Sum_probs=198.7
Q ss_pred ccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCH-------HHHHHHHHHHhhccCccccceeeEEEeCCeEEEE
Q 002826 585 EKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSS-------KTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 656 (876)
+..+..+.|+||+||+|+. .+++.||+|++........ +.+.+|++++++++||||+++++++.+.. ++|
T Consensus 22 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv 99 (287)
T 4f0f_A 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMV 99 (287)
T ss_dssp EEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEE
T ss_pred eehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEE
Confidence 3334444445999999976 4899999999865433221 57889999999999999999999987655 699
Q ss_pred EEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCC--ccccccccCceeeCCCCC-----eEEccccch
Q 002826 657 YEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPH--LLHRNVKSKNILLDADFE-----PKLTDFALD 729 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlkp~NIll~~~~~-----~kl~DfGla 729 (876)
|||+++++|.+.+.+....+++..+..++.|++.|++|||+. + |+||||||+||+++.++. +||+|||++
T Consensus 100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~ 176 (287)
T 4f0f_A 100 MEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176 (287)
T ss_dssp EECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTC
T ss_pred EEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCCCcc
Confidence 999999999999987777899999999999999999999999 8 999999999999987776 999999998
Q ss_pred hhccccccccccccccccccccCccccC--CCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccc
Q 002826 730 RIVGEAAFQSTMSSEYALSCYNAPEYGY--SKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNG 807 (876)
Q Consensus 730 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 807 (876)
+..... .....||+.|+|||.+. ...++.++||||+|+++|||++|+.||..................
T Consensus 177 ~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~----- 246 (287)
T 4f0f_A 177 QQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG----- 246 (287)
T ss_dssp BCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSC-----
T ss_pred cccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccC-----
Confidence 754432 23345899999999983 455788999999999999999999999876655443333322211
Q ss_pred cccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002826 808 AIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSL 855 (876)
Q Consensus 808 ~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i 855 (876)
....+. ...+..+.+++.+||+.||++|||++|+++.|+++
T Consensus 247 ~~~~~~-------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 247 LRPTIP-------EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CCCCCC-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CCCCCC-------cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 111111 12234678999999999999999999999999875
No 89
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.5e-38 Score=347.60 Aligned_cols=246 Identities=22% Similarity=0.270 Sum_probs=199.5
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecC---CccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNF---GCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
|.....+|.|+ ||.||+|+.. +|+.||+|++.+. .......+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus 7 y~~~~~lG~G~-fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E 85 (337)
T 1o6l_A 7 FDYLKLLGKGT-FGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME 85 (337)
T ss_dssp EEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEecCC-CeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEe
Confidence 44445556555 9999999765 7999999999753 22455678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
|+++|+|.+++.+.+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-- 159 (337)
T 1o6l_A 86 YANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-- 159 (337)
T ss_dssp CCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT--
T ss_pred CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC--
Confidence 999999999997654 689999999999999999999999 99999999999999999999999999997643221
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...+. .... .+.
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~i~---~~~~--------~~p- 225 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL--FELIL---MEEI--------RFP- 225 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH---HCCC--------CCC-
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH--HHHHH---cCCC--------CCC-
Confidence 123345689999999999988999999999999999999999999976543221 11111 1110 000
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRP-----SMFEVVKA 851 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RP-----s~~ell~~ 851 (876)
......+.+++.+||+.||++|| +++|+++.
T Consensus 226 --~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 --RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp --TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 11234578999999999999999 89999864
No 90
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.2e-39 Score=351.80 Aligned_cols=256 Identities=22% Similarity=0.374 Sum_probs=198.4
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcE----EEEEEEecC-CccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGEL----IAVKKLVNF-GCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 656 (876)
|.....+|.|| ||+||+|... +++. ||+|.+... .....+.+.+|+.++++++||||++++++|.++. .++|
T Consensus 17 y~~~~~lG~G~-~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v 94 (327)
T 3poz_A 17 FKKIKVLGSGA-FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLI 94 (327)
T ss_dssp EEEEEEEEEET-TEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEE
T ss_pred cccceEEeeCC-CeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEE
Confidence 44445556555 9999999753 5554 577776433 2245678999999999999999999999998754 7899
Q ss_pred EEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccc
Q 002826 657 YEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 736 (876)
+||+++|+|.+++.+....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 999999999999988777899999999999999999999999 99999999999999999999999999999876544
Q ss_pred cccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChh
Q 002826 737 FQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPK 815 (876)
Q Consensus 737 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 815 (876)
.........+|..|+|||.+.+..++.++|||||||++|||+| |+.||........ ...+....... .
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~~~~~~~~~~~------~--- 240 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--SSILEKGERLP------Q--- 240 (327)
T ss_dssp C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHHHTTCCCC------C---
T ss_pred ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH--HHHHHcCCCCC------C---
Confidence 3333444457889999999998899999999999999999999 9999987554432 22222111100 0
Q ss_pred hhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 816 IANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 816 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
.......+.+++.+||+.||++|||++|+++.|+.+...
T Consensus 241 ----~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 241 ----PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ----CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred ----CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 111233678999999999999999999999999988653
No 91
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-38 Score=342.61 Aligned_cols=268 Identities=24% Similarity=0.243 Sum_probs=206.2
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC-ccCHHHHHHHHHHHhhccCccccceeeEEEeCC--eEEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG-CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDE--SIFLIYE 658 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 658 (876)
.|.+.+..|.|+||+||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 3444444455559999999765 69999999997533 244577889999999999999999999998755 7899999
Q ss_pred cCCCCCHHHHhhccC--CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceee----CCCCCeEEccccchhhc
Q 002826 659 FLQMGSLGDLICRQD--FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILL----DADFEPKLTDFALDRIV 732 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll----~~~~~~kl~DfGla~~~ 732 (876)
|+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 999999999997653 3389999999999999999999999 99999999999999 77788999999999876
Q ss_pred cccccccccccccccccccCccccC--------CCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHh-h
Q 002826 733 GEAAFQSTMSSEYALSCYNAPEYGY--------SKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKI-N 803 (876)
Q Consensus 733 ~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~-~ 803 (876)
..... .....||+.|+|||.+. +..++.++|||||||++|||++|+.||.......... +...... .
T Consensus 167 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~ 242 (319)
T 4euu_A 167 EDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK-EVMYKIITG 242 (319)
T ss_dssp CTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCH-HHHHHHHHH
T ss_pred CCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhH-HHHHHHhcC
Confidence 54332 23345899999999865 5678999999999999999999999997644332211 1111111 1
Q ss_pred ccccccccc-------------ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 002826 804 ITNGAIQVL-------------DPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLST 857 (876)
Q Consensus 804 ~~~~~~~~~-------------d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~ 857 (876)
.+......+ -+............+.+++.+||+.||++|||++|+++...+-.-
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 110000000 011113345666788999999999999999999999999887543
No 92
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.7e-39 Score=339.59 Aligned_cols=252 Identities=22% Similarity=0.374 Sum_probs=206.8
Q ss_pred cCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCCCH
Q 002826 586 KSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMGSL 665 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 665 (876)
...+|.|+ ||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||||+++++|
T Consensus 13 ~~~lg~G~-~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 90 (267)
T 3t9t_A 13 VQEIGSGQ-FGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCL 90 (267)
T ss_dssp EEEEEEET-TEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBH
T ss_pred eeEecCCC-ceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcH
Confidence 34455555 999999998889999999997643 4567899999999999999999999999999999999999999999
Q ss_pred HHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccccccccc
Q 002826 666 GDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSSEY 745 (876)
Q Consensus 666 ~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 745 (876)
.+++......+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++....... .......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~ 166 (267)
T 3t9t_A 91 SDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTK 166 (267)
T ss_dssp HHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH-HSTTSTT
T ss_pred HHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccc-ccccccc
Confidence 999987766799999999999999999999999 999999999999999999999999999987653221 1223345
Q ss_pred ccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHHHH
Q 002826 746 ALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQM 824 (876)
Q Consensus 746 gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 824 (876)
++..|+|||...+..++.++||||+|+++|||++ |+.||....... ....+.. . .... .+. ...
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~i~~---~---~~~~-~~~------~~~ 231 (267)
T 3t9t_A 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDIST---G---FRLY-KPR------LAS 231 (267)
T ss_dssp CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHT---T---CCCC-CCT------TSC
T ss_pred ccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--HHHHHhc---C---CcCC-CCc------cCc
Confidence 6788999999888889999999999999999999 899997644322 1111111 1 0001 111 123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 825 LGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 825 ~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
..+.+++.+||+.||++|||++|+++.|+++.++
T Consensus 232 ~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 232 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 4578999999999999999999999999998764
No 93
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.7e-39 Score=349.39 Aligned_cols=256 Identities=25% Similarity=0.357 Sum_probs=205.5
Q ss_pred ccCCCCCCCCceEEEEEEe------CCCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 585 EKSSAGNGGPFGRVYILSL------PSGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
.+.+..+.|+||.||+|.. .+++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 105 (314)
T 2ivs_A 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIV 105 (314)
T ss_dssp EEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEE
Confidence 3334444445999999965 3468999999865432 23467889999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccC-----------------------CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCcee
Q 002826 658 EFLQMGSLGDLICRQD-----------------------FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNIL 714 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIl 714 (876)
||+++++|.+++.... ..+++..+.+++.|++.|++|||+. +|+||||||+||+
T Consensus 106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~NIl 182 (314)
T 2ivs_A 106 EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNIL 182 (314)
T ss_dssp ECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred eecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchheEE
Confidence 9999999999997643 2489999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhh
Q 002826 715 LDADFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLD 793 (876)
Q Consensus 715 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~ 793 (876)
++.++.+||+|||+++...............+++.|+|||...+..++.++||||+|+++|||++ |+.||........
T Consensus 183 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~- 261 (314)
T 2ivs_A 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL- 261 (314)
T ss_dssp EETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-
Confidence 99999999999999987754433333444557888999999888889999999999999999999 9999987554332
Q ss_pred HHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 794 VVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
...+.... .... .......+.+++.+||+.||++|||+.|+++.|+++..+
T Consensus 262 -~~~~~~~~------~~~~-------~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 262 -FNLLKTGH------RMER-------PDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp -HHHHHTTC------CCCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -HHHhhcCC------cCCC-------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 22221110 0000 112234678999999999999999999999999998654
No 94
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-37 Score=367.81 Aligned_cols=337 Identities=22% Similarity=0.234 Sum_probs=244.0
Q ss_pred cCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCc
Q 002826 96 CELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPF 175 (876)
Q Consensus 96 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 175 (876)
..+++++.|++++|.+....+..|+++++|++|+|+ +|.+++..|..|+.+++|++|+|++|.+++..|.
T Consensus 48 l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~----------~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 117 (597)
T 3oja_B 48 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN----------DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH 117 (597)
T ss_dssp GGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECT----------TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred ccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECC----------CCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHH
Confidence 357899999999999999888889999999988554 5566777788999999999999999999999999
Q ss_pred cccCCCcceEEEccCCCCcCCCCCCc-ccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCcccccc
Q 002826 176 VFGNFSELVVLDLSQNAYLISEIPSD-IGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSL 254 (876)
Q Consensus 176 ~~~~l~~L~~L~Ls~N~~~~~~~p~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l 254 (876)
.|+++++|++|+|++|. +..+|.. |.++++|++|+|++|++++..|..|.++++|++|+|++|+++ .++. ..+
T Consensus 118 ~~~~l~~L~~L~L~~n~--l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~---~~l 191 (597)
T 3oja_B 118 VFQNVPLLTVLVLERND--LSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDL---SLI 191 (597)
T ss_dssp TTTTCTTCCEEECCSSC--CCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS-BCCG---GGC
T ss_pred HHcCCCCCCEEEeeCCC--CCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC-CcCh---hhh
Confidence 99999999999999998 5677766 689999999999999999998989999999999999999998 4442 347
Q ss_pred ccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEe
Q 002826 255 LKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRA 334 (876)
Q Consensus 255 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 334 (876)
++|+.|++++|.+++ +...++|+.|++++|.++...+..+ ++|+.|+|++|.++
T Consensus 192 ~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~~---~~L~~L~L~~n~l~------------------ 245 (597)
T 3oja_B 192 PSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGPVN---VELTILKLQHNNLT------------------ 245 (597)
T ss_dssp TTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECSCC---SCCCEEECCSSCCC------------------
T ss_pred hhhhhhhcccCcccc-----ccCCchhheeeccCCcccccccccC---CCCCEEECCCCCCC------------------
Confidence 788888888888874 2344567777777777764333221 34555555555544
Q ss_pred cCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccC
Q 002826 335 ESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQ 414 (876)
Q Consensus 335 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~ 414 (876)
+ +..+..+++|+.|+|++|.+++.+|..|..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.+++.
T Consensus 246 ------~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~i 316 (597)
T 3oja_B 246 ------D--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHV 316 (597)
T ss_dssp ------C--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCCC
T ss_pred ------C--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCcc
Confidence 3 2345555555555666555555555555555555555555555554 244455566777777777777765
Q ss_pred CcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCcccccccceEEccCCccccccCCcccCCCC
Q 002826 415 IPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNLKLALFNVSFNKLSGRVPYSLISGLP 494 (876)
Q Consensus 415 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~l~ls~N~l~~~~p~~~~~~~~ 494 (876)
++.+..+++|+.|+|++|+|++.. +..+++|+.|+|++|++++ ..+...+..+.
T Consensus 317 ~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~-----------------------~~~~~~~~~~~ 370 (597)
T 3oja_B 317 ERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDC-----------------------NSLRALFRNVA 370 (597)
T ss_dssp GGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEH-----------------------HHHHHHTTTCC
T ss_pred CcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCC-----------------------hhHHHHHHHHh
Confidence 556777778888888888877542 5566677777777776664 22222344455
Q ss_pred CccccCCCCCCCCCC
Q 002826 495 ASYLQGNPGLCGPGL 509 (876)
Q Consensus 495 ~~~~~~N~~~C~~~~ 509 (876)
...+.+++..|+.+.
T Consensus 371 ~~~~~~~~~~C~~~~ 385 (597)
T 3oja_B 371 RPAVDDADQHCKIDY 385 (597)
T ss_dssp TTTBCCCCCCCCTTC
T ss_pred hhccccccccCCcch
Confidence 566788888898743
No 95
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.9e-39 Score=353.47 Aligned_cols=261 Identities=23% Similarity=0.311 Sum_probs=204.1
Q ss_pred ccccCCCCCCCCceEEEEEEe------CCCcEEEEEEEecCC-ccCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSL------PSGELIAVKKLVNFG-CQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIF 654 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 654 (876)
|.....+|.|| ||.||+|.. .+++.||+|++.... ....+.+.+|+.+++++ +||||+++++++...+..+
T Consensus 47 y~~~~~lG~G~-~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 125 (344)
T 1rjb_A 47 LEFGKVLGSGA-FGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIY 125 (344)
T ss_dssp EEEEEEEEECS-SEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred ceeeeeecCCC-CceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccE
Confidence 33344455555 999999975 356789999997532 23456789999999999 8999999999999999999
Q ss_pred EEEEcCCCCCHHHHhhccCC----------------------cCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCc
Q 002826 655 LIYEFLQMGSLGDLICRQDF----------------------QLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKN 712 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~~~----------------------~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~N 712 (876)
+||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|
T Consensus 126 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~N 202 (344)
T 1rjb_A 126 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARN 202 (344)
T ss_dssp EEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGG
T ss_pred EEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhh
Confidence 99999999999999976532 378999999999999999999999 99999999999
Q ss_pred eeeCCCCCeEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcch
Q 002826 713 ILLDADFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAES 791 (876)
Q Consensus 713 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~ 791 (876)
|+++.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||+| |+.||.......
T Consensus 203 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 282 (344)
T 1rjb_A 203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 282 (344)
T ss_dssp EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred EEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH
Confidence 9999999999999999987764433333444557889999999888889999999999999999998 999998755433
Q ss_pred hhHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcc
Q 002826 792 LDVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSL 861 (876)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~ 861 (876)
. .......... .... ......+.+++.+||+.||.+|||+.|+++.|+.+......
T Consensus 283 ~-~~~~~~~~~~------~~~~-------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 283 N-FYKLIQNGFK------MDQP-------FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp H-HHHHHHTTCC------CCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred H-HHHHHhcCCC------CCCC-------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 2 2222221110 0000 11234678999999999999999999999999998776543
No 96
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=8.9e-39 Score=365.04 Aligned_cols=251 Identities=25% Similarity=0.439 Sum_probs=205.1
Q ss_pred CCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCCCHH
Q 002826 587 SSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMGSLG 666 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 666 (876)
..+|.|+ ||+||+|...+++.||||++.... ...+.+.+|++++++++||||+++++++. .+..++||||+++|+|.
T Consensus 194 ~~lG~G~-fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 194 KKLGAGQ-FGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEECCS-SEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEcccCC-ceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 4455555 999999999889999999997543 56788999999999999999999999986 56789999999999999
Q ss_pred HHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccccccccc
Q 002826 667 DLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSSEY 745 (876)
Q Consensus 667 ~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 745 (876)
+++... +..+++..+.+++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .......
T Consensus 271 ~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~ 346 (454)
T 1qcf_A 271 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAK 346 (454)
T ss_dssp HHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH-HTTCSSS
T ss_pred HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce-eccCCCc
Confidence 999754 34688999999999999999999999 999999999999999999999999999987654321 1223334
Q ss_pred ccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHHHH
Q 002826 746 ALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQM 824 (876)
Q Consensus 746 gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 824 (876)
++..|+|||.+....++.++|||||||++|||+| |+.||...... .....+....... .| ...+
T Consensus 347 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~~~-------~~------~~~~ 411 (454)
T 1qcf_A 347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYRMP-------RP------ENCP 411 (454)
T ss_dssp SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHHTCCCC-------CC------TTSC
T ss_pred ccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCC-------CC------CCCC
Confidence 6788999999988889999999999999999999 99999764432 2222222211110 01 1123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 825 LGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 825 ~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
..+.+++.+||+.||++|||++++++.|+++....
T Consensus 412 ~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 412 EELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 46789999999999999999999999999987654
No 97
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.1e-39 Score=350.18 Aligned_cols=270 Identities=25% Similarity=0.375 Sum_probs=207.3
Q ss_pred cchhhhhhcccccCCCCCCCCceEEEEEEe-----CCCcEEEEEEEecCC-ccCHHHHHHHHHHHhhccCccccceeeEE
Q 002826 574 VTEHDLVIGMDEKSSAGNGGPFGRVYILSL-----PSGELIAVKKLVNFG-CQSSKTLKTEVKTLAKIRHKNIVKVLGFF 647 (876)
Q Consensus 574 ~~~~~l~~~~~~~~~~g~~g~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 647 (876)
+....+...+++..+..|.|+||.||+|++ .+++.||+|++.... ......+.+|++++++++||||+++++++
T Consensus 13 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 92 (302)
T 4e5w_A 13 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGIC 92 (302)
T ss_dssp CCTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEE
Confidence 344445555455555555555999999983 478999999997543 23457889999999999999999999999
Q ss_pred EeC--CeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEcc
Q 002826 648 HSD--ESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTD 725 (876)
Q Consensus 648 ~~~--~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~D 725 (876)
.+. ...++||||+++++|.+++.+....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 93 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 169 (302)
T 4e5w_A 93 TEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 169 (302)
T ss_dssp EC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred ecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECc
Confidence 876 678999999999999999977767899999999999999999999999 999999999999999999999999
Q ss_pred ccchhhccccccc-cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCc----------chhhH
Q 002826 726 FALDRIVGEAAFQ-STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPA----------ESLDV 794 (876)
Q Consensus 726 fGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~----------~~~~~ 794 (876)
||+++........ .......||..|+|||.+.+..++.++||||+|+++|||++|+.|+..... .....
T Consensus 170 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 249 (302)
T 4e5w_A 170 FGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTV 249 (302)
T ss_dssp CTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHH
T ss_pred ccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCH
Confidence 9999877643321 223445578889999998888889999999999999999999998643211 01111
Q ss_pred HHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 002826 795 VKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLS 856 (876)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~ 856 (876)
........... .. ......+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 250 ~~~~~~~~~~~---~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 250 TRLVNTLKEGK---RL-------PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHHHTTC---CC-------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhccC---CC-------CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11111110000 00 011122346889999999999999999999999999874
No 98
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=6.1e-39 Score=350.09 Aligned_cols=257 Identities=19% Similarity=0.293 Sum_probs=188.8
Q ss_pred ccCCCCCCCCceEEEEEEeCC-Cc---EEEEEEEecCC--ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeE-----
Q 002826 585 EKSSAGNGGPFGRVYILSLPS-GE---LIAVKKLVNFG--CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESI----- 653 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~~~-~~---~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~----- 653 (876)
++.+..|.|+||+||+|.... ++ .||||++.... ....+.+.+|++++++++||||+++++++...+..
T Consensus 26 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (323)
T 3qup_A 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPI 105 (323)
T ss_dssp EEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------C
T ss_pred EEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCc
Confidence 333444444599999997653 32 89999986542 23346788999999999999999999999876654
Q ss_pred -EEEEEcCCCCCHHHHhhcc-----CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEcccc
Q 002826 654 -FLIYEFLQMGSLGDLICRQ-----DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFA 727 (876)
Q Consensus 654 -~lv~e~~~~gsL~~~l~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfG 727 (876)
++||||+++|+|.+++... ...+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.+||+|||
T Consensus 106 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~Dfg 182 (323)
T 3qup_A 106 PMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFG 182 (323)
T ss_dssp EEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred cEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEeecc
Confidence 9999999999999998643 22589999999999999999999999 99999999999999999999999999
Q ss_pred chhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhccc
Q 002826 728 LDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITN 806 (876)
Q Consensus 728 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 806 (876)
+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||........ ........ .
T Consensus 183 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~~~~~~~--~- 257 (323)
T 3qup_A 183 LSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI--YNYLIGGN--R- 257 (323)
T ss_dssp C-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHHHTTC--C-
T ss_pred ccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH--HHHHhcCC--C-
Confidence 9987765443333444557888999999988889999999999999999999 9999986544332 12111110 0
Q ss_pred ccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 807 GAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 807 ~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
... ....+..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 258 ---~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 258 ---LKQ-------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp ---CCC-------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ---CCC-------CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 000 1122346789999999999999999999999999987543
No 99
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2e-37 Score=352.84 Aligned_cols=357 Identities=21% Similarity=0.301 Sum_probs=255.4
Q ss_pred EEeecCCCCCcccccccccCCCCC-------------CeeecCCCccccccCccccCCCCCCcccCCCccc---------
Q 002826 78 ASINLQSLNLSGEISSSVCELSSL-------------SNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLI--------- 135 (876)
Q Consensus 78 ~~l~l~~~~l~~~~~~~~~~l~~L-------------~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l--------- 135 (876)
..+++.++++.|.+|++++++++| ++|++++|.+++ +|.. .++|++|+|++|.+
T Consensus 37 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~lp~~~~~ 112 (454)
T 1jl5_A 37 TEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTELPELPQS 112 (454)
T ss_dssp HHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSSCCCCCTT
T ss_pred hhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCccccccCC
Confidence 345566666777777777777654 777777777766 3331 35777777777753
Q ss_pred -ceeecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEec
Q 002826 136 -WVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQ 214 (876)
Q Consensus 136 -~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~ 214 (876)
+.|++++|++++ +|.. .++|++|+|++|++++ +| .|+++++|++|++++|+ +..+|..+ .+|++|+++
T Consensus 113 L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~--l~~lp~~~---~~L~~L~L~ 181 (454)
T 1jl5_A 113 LKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNS--LKKLPDLP---PSLEFIAAG 181 (454)
T ss_dssp CCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSC--CSCCCCCC---TTCCEEECC
T ss_pred CcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCc--CcccCCCc---ccccEEECc
Confidence 567888888875 2321 1689999999999996 66 59999999999999998 55677654 589999999
Q ss_pred CCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeeccccccc
Q 002826 215 SSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGS 294 (876)
Q Consensus 215 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 294 (876)
+|++++ +| .|.++++|++|++++|+++ .+|.. .++|++|++++|+++ .+| .+..+++|++|++++|++++
T Consensus 182 ~n~l~~-l~-~~~~l~~L~~L~l~~N~l~-~l~~~----~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~- 251 (454)
T 1jl5_A 182 NNQLEE-LP-ELQNLPFLTAIYADNNSLK-KLPDL----PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT- 251 (454)
T ss_dssp SSCCSS-CC-CCTTCTTCCEEECCSSCCS-SCCCC----CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-
T ss_pred CCcCCc-Cc-cccCCCCCCEEECCCCcCC-cCCCC----cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-
Confidence 999998 45 5999999999999999999 56654 358999999999999 566 48999999999999999996
Q ss_pred CCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccc
Q 002826 295 IPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSV 374 (876)
Q Consensus 295 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 374 (876)
+|.. +++|++|++++|++++ +|.. +++|+.|++++|++++.. . ..++|++|++++|++++ ++ .+
T Consensus 252 l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~-~---~~~~L~~L~l~~N~l~~-i~----~~ 315 (454)
T 1jl5_A 252 LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLS-E---LPPNLYYLNASSNEIRS-LC----DL 315 (454)
T ss_dssp CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEES-C---CCTTCCEEECCSSCCSE-EC----CC
T ss_pred cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCccc-C---cCCcCCEEECcCCcCCc-cc----CC
Confidence 4443 4799999999999996 4543 478999999999999742 1 12689999999999985 33 23
Q ss_pred -cCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCC--CCCcCCCCC------
Q 002826 375 -KSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTG--EIPPSLAEL------ 445 (876)
Q Consensus 375 -~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l------ 445 (876)
++|+.|++++|++++ +|.. +++|+.|++++|++++.+. .+++|++|+|++|++++ .+|.++..+
T Consensus 316 ~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~ 388 (454)
T 1jl5_A 316 PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAEVPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHL 388 (454)
T ss_dssp CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC--
T ss_pred cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccccccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccc
Confidence 589999999999997 5544 5889999999999996544 57999999999999998 788999888
Q ss_pred -------CCcceeeCCCCcccc--cCCCcccccccceEEccCCccccccCC
Q 002826 446 -------PVLTYLDLSDNNLTG--PIPQGLQNLKLALFNVSFNKLSGRVPY 487 (876)
Q Consensus 446 -------~~L~~L~Ls~N~l~~--~~p~~~~~l~l~~l~ls~N~l~~~~p~ 487 (876)
++|+.||+++|++++ .+|.++.. |.+.+|.+.+.+|.
T Consensus 389 ~~i~~~~~~L~~L~ls~N~l~~~~~iP~sl~~-----L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 389 AEVPELPQNLKQLHVETNPLREFPDIPESVED-----LRMNSERVVDPYEF 434 (454)
T ss_dssp ---------------------------------------------------
T ss_pred cccccccCcCCEEECCCCcCCccccchhhHhh-----eeCcCcccCCcccc
Confidence 899999999999997 77766544 55677777766653
No 100
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=6.4e-38 Score=336.80 Aligned_cols=260 Identities=22% Similarity=0.319 Sum_probs=198.5
Q ss_pred cccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccC--HHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 584 DEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQS--SKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
.....+|.|+ ||+||+|... +|+.||+|++....... ...+.+|++++++++||||+++++++.+++..++||||+
T Consensus 5 ~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 83 (292)
T 3o0g_A 5 EKLEKIGEGT-YGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_dssp EEEEEEEECS-SSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eeeeEecCCC-CeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence 3344555555 9999999764 79999999997544322 367889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQST 740 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 740 (876)
++ ++.+.+......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 84 ~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~ 157 (292)
T 3o0g_A 84 DQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--RC 157 (292)
T ss_dssp SE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--SC
T ss_pred CC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--cc
Confidence 86 67776666566899999999999999999999999 99999999999999999999999999998765332 22
Q ss_pred cccccccccccCccccCCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccccc-------
Q 002826 741 MSSEYALSCYNAPEYGYSKK-ATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVL------- 812 (876)
Q Consensus 741 ~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 812 (876)
.....||+.|+|||.+.+.. ++.++||||+||++|||++|..||..............+.............
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence 34456899999999987665 7999999999999999999888865544333322222222111110000000
Q ss_pred -------ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 813 -------DPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 813 -------d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
..............+.+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00001111223456789999999999999999999986
No 101
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.6e-38 Score=338.04 Aligned_cols=258 Identities=22% Similarity=0.356 Sum_probs=196.8
Q ss_pred ccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCC
Q 002826 585 EKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQM 662 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 662 (876)
....+|.|+ ||+||+|+..+|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~~lg~G~-~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (288)
T 1ob3_A 6 GLEKIGEGT-YGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ 84 (288)
T ss_dssp EEEEEEEET-TEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE
T ss_pred hhhhcccCC-CEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC
Confidence 344555555 9999999888899999999965432 2346788999999999999999999999999999999999986
Q ss_pred CCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccccc
Q 002826 663 GSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMS 742 (876)
Q Consensus 663 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 742 (876)
+|.+++......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 158 (288)
T 1ob3_A 85 -DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--RKYT 158 (288)
T ss_dssp -EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred -CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc--cccc
Confidence 99999987666799999999999999999999999 99999999999999999999999999998765322 1223
Q ss_pred cccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccc------ccccChh
Q 002826 743 SEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGA------IQVLDPK 815 (876)
Q Consensus 743 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~d~~ 815 (876)
...||+.|+|||.+.+ ..++.++||||+||++|||++|+.||....... ......+......... ....++.
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKYDPN 237 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhcccccccc
Confidence 4458999999998865 458999999999999999999999998654322 1222222111100000 0000111
Q ss_pred --------hhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 816 --------IANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 816 --------~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
...........+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 01111223456789999999999999999999986
No 102
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.7e-39 Score=350.52 Aligned_cols=254 Identities=22% Similarity=0.344 Sum_probs=199.3
Q ss_pred ccCCCCCCCCceEEEEEEeC-CCcE----EEEEEEecCC-ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 585 EKSSAGNGGPFGRVYILSLP-SGEL----IAVKKLVNFG-CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
....+|.|| ||+||+|... +++. ||+|.+.... ......+.+|+.+++.++||||+++++++. ++..++|||
T Consensus 17 ~~~~lG~G~-~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e 94 (325)
T 3kex_A 17 KLKVLGSGV-FGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQ 94 (325)
T ss_dssp EEEEEECCS-SCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEE
T ss_pred eeeeeeecC-CceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEE
Confidence 334455555 9999999754 5554 7778775432 233456778999999999999999999986 567899999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
|+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 95 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 171 (325)
T 3kex_A 95 YLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171 (325)
T ss_dssp CCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC
T ss_pred eCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCccccc
Confidence 9999999999987666899999999999999999999999 9999999999999999999999999999987654433
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
.......++..|+|||.+.+..++.++||||||+++|||+| |+.||....... ....+....... .+.
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~~~-------~~~-- 240 (325)
T 3kex_A 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VPDLLEKGERLA-------QPQ-- 240 (325)
T ss_dssp CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HHHHHHTTCBCC-------CCT--
T ss_pred ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HHHHHHcCCCCC-------CCC--
Confidence 33445567889999999988889999999999999999999 999998654332 222222111000 010
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
.....+.+++.+||+.||++|||++|+++.|+.+...
T Consensus 241 ----~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 241 ----ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp ----TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred ----cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0122467899999999999999999999999998654
No 103
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=348.77 Aligned_cols=269 Identities=14% Similarity=0.133 Sum_probs=201.6
Q ss_pred cccccCCCCCCCCceEEEEEEeC----CCcEEEEEEEecCCcc-----------CHHHHHHHHHHHhhccCccccceeeE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP----SGELIAVKKLVNFGCQ-----------SSKTLKTEVKTLAKIRHKNIVKVLGF 646 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~~ 646 (876)
+.+.+.+..+.|+||.||+|... ++..||+|++...... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 33444444455559999999775 6789999998754321 12345678888999999999999999
Q ss_pred EEe----CCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCC--C
Q 002826 647 FHS----DESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADF--E 720 (876)
Q Consensus 647 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~--~ 720 (876)
+.+ .+..|+||||+ +++|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCc
Confidence 988 67899999999 999999997665 799999999999999999999999 999999999999998777 9
Q ss_pred eEEccccchhhccccccc-----cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHH
Q 002826 721 PKLTDFALDRIVGEAAFQ-----STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVV 795 (876)
Q Consensus 721 ~kl~DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~ 795 (876)
+||+|||+++.+...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 999999999876533211 112344689999999999888899999999999999999999999965333322222
Q ss_pred HHHHHHhhcccccccccChhhhhhcH--HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCccc
Q 002826 796 KWVRRKINITNGAIQVLDPKIANCYQ--QQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLL 862 (876)
Q Consensus 796 ~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~ 862 (876)
........ .+.+....... ..+..+.+++.+||+.||++|||++|+++.|+.+.-.....
T Consensus 272 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 333 (345)
T 2v62_A 272 TAKTNLLD-------ELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPL 333 (345)
T ss_dssp HHHHHHHH-------TTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCCCCC
T ss_pred HHHHhhcc-------cccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcccCC
Confidence 22111111 11111111111 23446889999999999999999999999999977644443
No 104
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.2e-38 Score=346.00 Aligned_cols=255 Identities=25% Similarity=0.363 Sum_probs=206.1
Q ss_pred cCCCCCCCCceEEEEEEe------CCCcEEEEEEEecCCc-cCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEE
Q 002826 586 KSSAGNGGPFGRVYILSL------PSGELIAVKKLVNFGC-QSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 657 (876)
...+|.|| ||.||+|+. .+++.||+|++..... ...+.+.+|+++++++ +||||+++++++.+++..++||
T Consensus 28 ~~~lg~G~-~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 28 GKTLGAGA-FGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEECS-SEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHhhCccC-CcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 34455554 999999974 3578999999975432 2346788999999999 9999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCC-----------------cCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCC
Q 002826 658 EFLQMGSLGDLICRQDF-----------------QLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFE 720 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~-----------------~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~ 720 (876)
||+++|+|.+++..... .+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 183 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRI 183 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETTTE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcCCCC
Confidence 99999999999976532 489999999999999999999999 9999999999999999999
Q ss_pred eEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHH
Q 002826 721 PKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVR 799 (876)
Q Consensus 721 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 799 (876)
+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||+| |+.||........ ......
T Consensus 184 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~~~ 262 (313)
T 1t46_A 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-FYKMIK 262 (313)
T ss_dssp EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-HHHHHH
T ss_pred EEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-HHHHhc
Confidence 99999999987765443333344557888999999888889999999999999999999 9999987554332 222222
Q ss_pred HHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 800 RKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 800 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
.... .... ...+..+.+++.+||+.||++|||+.|+++.|+++..+
T Consensus 263 ~~~~------~~~~-------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 263 EGFR------MLSP-------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HTCC------CCCC-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCC------CCCc-------ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1111 0001 11234678999999999999999999999999988654
No 105
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=349.55 Aligned_cols=244 Identities=22% Similarity=0.287 Sum_probs=196.5
Q ss_pred CCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCCCHH
Q 002826 588 SAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMGSLG 666 (876)
Q Consensus 588 ~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 666 (876)
.+|.|+ ||.||+|.. .+|+.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++++|.
T Consensus 96 ~lG~G~-~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~ 174 (373)
T 2x4f_A 96 ILGGGR-FGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174 (373)
T ss_dssp ECC------CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEH
T ss_pred EEecCc-CEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence 355555 999999966 479999999998765556678999999999999999999999999999999999999999999
Q ss_pred HHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceee--CCCCCeEEccccchhhccccccccccccc
Q 002826 667 DLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILL--DADFEPKLTDFALDRIVGEAAFQSTMSSE 744 (876)
Q Consensus 667 ~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll--~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 744 (876)
+++......+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++....... ....
T Consensus 175 ~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~~~ 248 (373)
T 2x4f_A 175 DRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LKVN 248 (373)
T ss_dssp HHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---CCCC
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---cccc
Confidence 99977666799999999999999999999999 99999999999999 5678999999999987654322 2334
Q ss_pred cccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHHHH
Q 002826 745 YALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQM 824 (876)
Q Consensus 745 ~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 824 (876)
.||+.|+|||++....++.++|||||||++|||++|+.||........ ....... . ....++.. ....
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~i~~~----~---~~~~~~~~----~~~~ 316 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET-LNNILAC----R---WDLEDEEF----QDIS 316 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHT----C---CCSCSGGG----TTSC
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhc----c---CCCChhhh----ccCC
Confidence 589999999999888899999999999999999999999986543221 1111111 0 01111111 1223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 825 LGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 825 ~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
..+.+++.+||+.||++|||+.|+++
T Consensus 317 ~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 317 EEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 46789999999999999999999998
No 106
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=341.39 Aligned_cols=251 Identities=25% Similarity=0.373 Sum_probs=192.7
Q ss_pred cCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCCCH
Q 002826 586 KSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMGSL 665 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 665 (876)
...+|.|| ||+||+|+. .++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||+++++|
T Consensus 13 ~~~lg~G~-~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~L 86 (307)
T 2eva_A 13 EEVVGRGA-FGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSL 86 (307)
T ss_dssp EEEEECCS-SSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCBH
T ss_pred eeEeecCC-CceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCCH
Confidence 34455555 999999987 5889999998642 345678999999999999999999998873 47899999999999
Q ss_pred HHHhhccCC--cCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCC-eEEccccchhhccccccccccc
Q 002826 666 GDLICRQDF--QLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFE-PKLTDFALDRIVGEAAFQSTMS 742 (876)
Q Consensus 666 ~~~l~~~~~--~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~-~kl~DfGla~~~~~~~~~~~~~ 742 (876)
.+++..... .+++..+.+++.|+++|++|||+.+..+|+||||||+||+++.++. +||+|||+++..... ..
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-----~~ 161 (307)
T 2eva_A 87 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-----MT 161 (307)
T ss_dssp HHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------------
T ss_pred HHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-----cc
Confidence 999976542 4789999999999999999999932229999999999999998876 799999999765432 12
Q ss_pred cccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHH
Q 002826 743 SEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQ 822 (876)
Q Consensus 743 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 822 (876)
...||+.|+|||...+..++.++||||||+++|||++|+.||................ ... +.. ...
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~~~--------~~~---~~~ 228 (307)
T 2eva_A 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN--GTR--------PPL---IKN 228 (307)
T ss_dssp ---CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT--TCC--------CCC---BTT
T ss_pred cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc--CCC--------CCc---ccc
Confidence 3348999999999998899999999999999999999999997644333221111111 100 000 111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 823 QMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 823 ~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
.+..+.+++.+||+.||++|||+.|+++.|+.+.+...
T Consensus 229 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 229 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 23357899999999999999999999999999876543
No 107
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-38 Score=346.66 Aligned_cols=244 Identities=22% Similarity=0.348 Sum_probs=195.7
Q ss_pred cccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecC---CccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEc
Q 002826 584 DEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNF---GCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 659 (876)
|.+.+..|.|+||.||+|.. .+|+.||+|++... .......+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 90 (336)
T 3h4j_B 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY 90 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEEC
Confidence 34444444455999999976 58999999998642 123346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccc
Q 002826 660 LQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQS 739 (876)
Q Consensus 660 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 739 (876)
+ +|+|.+++.+.+ .+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 91 ~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~-- 163 (336)
T 3h4j_B 91 A-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF-- 163 (336)
T ss_dssp C-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT--
T ss_pred C-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc--
Confidence 9 679999887654 699999999999999999999999 999999999999999999999999999987654332
Q ss_pred ccccccccccccCccccCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 740 TMSSEYALSCYNAPEYGYSKKA-TAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 740 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
.....||+.|+|||.+.+..+ ++++||||+||++|||++|+.||........ ...+......
T Consensus 164 -~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~----------------~~~i~~~~~~ 226 (336)
T 3h4j_B 164 -LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL----------------FKKVNSCVYV 226 (336)
T ss_dssp -TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC----------------BCCCCSSCCC
T ss_pred -cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH----------------HHHHHcCCCC
Confidence 234468999999999887765 7899999999999999999999986543321 0000000000
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.+...+..+.+++.+||+.||.+|||++|+++.
T Consensus 227 ~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 227 MPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 111123457899999999999999999999874
No 108
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.1e-37 Score=367.73 Aligned_cols=393 Identities=21% Similarity=0.216 Sum_probs=292.3
Q ss_pred EEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCC
Q 002826 76 TVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGS 155 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~ 155 (876)
.+..++|+++++++..+.+|.+|++|++|+|++|+|++..+..|+++++|++|+|++|+ +++..+..|++
T Consensus 77 ~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~----------l~~l~~~~~~~ 146 (635)
T 4g8a_A 77 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETN----------LASLENFPIGH 146 (635)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSC----------CCCSTTCCCTT
T ss_pred CCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCc----------CCCCChhhhhc
Confidence 56779999999998888899999999999999999999888999999999999777664 34444445555
Q ss_pred ccccceecccccccCCC-cCccccCCCcceEEEccCCCCcCCCCCCcccccCccc----EEEecCCCCcccCCcc-----
Q 002826 156 LVNLQVLNLGSNLLSGS-VPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLE----QLFLQSSGFHGVIPDS----- 225 (876)
Q Consensus 156 l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~----~L~L~~n~l~~~~~~~----- 225 (876)
+++|++|+|++|++++. .|..++++++|++|+|++|++ .+..|..|..+.+++ .++++.|.+..+.+..
T Consensus 147 L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l-~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~ 225 (635)
T 4g8a_A 147 LKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI-QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIR 225 (635)
T ss_dssp CTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC-CEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCE
T ss_pred CcccCeeccccCccccCCCchhhccchhhhhhcccCccc-cccccccccchhhhhhhhhhhhcccCcccccCcccccchh
Confidence 55566666666555432 345555555566666655551 111222333322221 2333333333222211
Q ss_pred --------------------------------------------------------------------------------
Q 002826 226 -------------------------------------------------------------------------------- 225 (876)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (876)
T Consensus 226 ~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 305 (635)
T 4g8a_A 226 LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCL 305 (635)
T ss_dssp EEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGG
T ss_pred hhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhh
Confidence
Q ss_pred ------------------ccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeee
Q 002826 226 ------------------FVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLH 287 (876)
Q Consensus 226 ------------------~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 287 (876)
+....+|+.|++++|++. .++.. .+..|+.++++.|.+.. +.....+++|+.|+++
T Consensus 306 ~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~-~~~~~---~l~~L~~l~l~~n~~~~--~~~~~~l~~L~~L~ls 379 (635)
T 4g8a_A 306 TNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFG-QFPTL---KLKSLKRLTFTSNKGGN--AFSEVDLPSLEFLDLS 379 (635)
T ss_dssp TTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEES-SCCCC---BCTTCCEEEEESCCSCC--BCCCCBCTTCCEEECC
T ss_pred cccccccccccccccccccccchhhhhhhccccccc-CcCcc---cchhhhhcccccccCCC--Ccccccccccccchhh
Confidence 111223333444444433 22211 13344444444444432 2233467899999999
Q ss_pred cccccc--cCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCc-cccccCCCCCeeeccCcccC
Q 002826 288 KNFFNG--SIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIP-DSISMAAQLEQVQIDNNRFT 364 (876)
Q Consensus 288 ~N~i~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~ 364 (876)
+|.+.. ..+..+..+.+|+.+++..|.+.. .+..+..+++|+.+++..|......+ ..|..+.+++.+++++|+++
T Consensus 380 ~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~ 458 (635)
T 4g8a_A 380 RNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR 458 (635)
T ss_dssp SSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCE
T ss_pred ccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccc
Confidence 999864 445567788899999999999884 56678899999999999988876655 56789999999999999999
Q ss_pred CCCCCccccccCccEEeCCCccc-cCCCCCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCCcCCCCCCcCC
Q 002826 365 SSIPQGLGSVKSLYRFSASQNSF-YGSLPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSL 442 (876)
Q Consensus 365 ~~~p~~~~~l~~L~~L~ls~N~l-~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~ 442 (876)
+..|..+..+++|+.|++++|.+ .+..|..|..+++|++|||++|+|++.+| .|.++++|++|+|++|+|++..|..|
T Consensus 459 ~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~ 538 (635)
T 4g8a_A 459 VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPY 538 (635)
T ss_dssp ECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGG
T ss_pred cccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHH
Confidence 99999999999999999999985 45678999999999999999999999887 79999999999999999999999999
Q ss_pred CCCCCcceeeCCCCcccccCCCccccc--ccceEEccCCccccccC
Q 002826 443 AELPVLTYLDLSDNNLTGPIPQGLQNL--KLALFNVSFNKLSGRVP 486 (876)
Q Consensus 443 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~l~~l~ls~N~l~~~~p 486 (876)
.++++|++|||++|+|++..|..+..+ .++.|++++|++++...
T Consensus 539 ~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 539 KCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred hCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999999999999999999999887 59999999999987654
No 109
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.5e-39 Score=342.48 Aligned_cols=255 Identities=21% Similarity=0.334 Sum_probs=191.4
Q ss_pred cccCCCCCCCCceEEEEEEeC----CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 584 DEKSSAGNGGPFGRVYILSLP----SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
+++.+..|.|+||.||+|... .+..||+|++..... ...+.+.+|+.++++++||||+++++++. ++..++|||
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 95 (281)
T 1mp8_A 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIME 95 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred eEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEe
Confidence 334444444559999999764 245799999865322 23457889999999999999999999984 567899999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
|+++++|.+++......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 172 (281)
T 1mp8_A 96 LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 172 (281)
T ss_dssp CCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCccccc
Confidence 9999999999987766799999999999999999999999 9999999999999999999999999999877543221
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
......+++.|+|||......++.++||||+|+++|||++ |+.||....... ....+.... ...+.
T Consensus 173 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i~~~~------~~~~~---- 239 (281)
T 1mp8_A 173 -KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGE------RLPMP---- 239 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTC------CCCCC----
T ss_pred -ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHHHcCC------CCCCC----
Confidence 1223346788999999888889999999999999999997 999998654432 222221110 00111
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
...+..+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 240 ---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 240 ---PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11234678999999999999999999999999998653
No 110
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.8e-38 Score=353.40 Aligned_cols=256 Identities=19% Similarity=0.221 Sum_probs=202.6
Q ss_pred hhhhhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeCCeE
Q 002826 577 HDLVIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESI 653 (876)
Q Consensus 577 ~~l~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 653 (876)
..+...|.....+|.|| ||+||+|.. .+|+.||+|++..... .....+.+|+++++.++||||+++++++.+++..
T Consensus 7 ~~~~~~Y~i~~~LG~G~-fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 85 (444)
T 3soa_A 7 TRFTEEYQLFEELGKGA-FSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHH 85 (444)
T ss_dssp CHHHHHEEEEEEEEEC---CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEE
T ss_pred ccccCCeEEEEEeccCC-CeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEE
Confidence 34444555556666666 999999965 5899999999975432 2345688999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeC---CCCCeEEccccchh
Q 002826 654 FLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLD---ADFEPKLTDFALDR 730 (876)
Q Consensus 654 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~---~~~~~kl~DfGla~ 730 (876)
|+||||+++|+|.+.+...+ .+++..+..++.|++.|++|||+. +|+||||||+||+++ .++.+||+|||+++
T Consensus 86 ~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 86 YLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 99999999999999987654 699999999999999999999999 999999999999998 46889999999998
Q ss_pred hccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccc
Q 002826 731 IVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQ 810 (876)
Q Consensus 731 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (876)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|++||....... ....+... ...
T Consensus 162 ~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~--~~~~i~~~------~~~ 231 (444)
T 3soa_A 162 EVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR--LYQQIKAG------AYD 231 (444)
T ss_dssp CCCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHT------CCC
T ss_pred EecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH--HHHHHHhC------CCC
Confidence 7654321 2234569999999999998889999999999999999999999997644322 12222111 111
Q ss_pred ccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 811 VLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 811 ~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
...+.. ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 232 ~~~~~~----~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 232 FPSPEW----DTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CCTTTT----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCcccc----ccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 111111 1223457899999999999999999999873
No 111
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.6e-39 Score=353.66 Aligned_cols=264 Identities=25% Similarity=0.322 Sum_probs=203.8
Q ss_pred ccCCCCCCCCceEEEEEEe-----CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEE--eCCeEEEEE
Q 002826 585 EKSSAGNGGPFGRVYILSL-----PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFH--SDESIFLIY 657 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~lv~ 657 (876)
....+|.|+ ||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++. +.+..++||
T Consensus 27 ~~~~lg~G~-~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 105 (327)
T 3lxl_A 27 YISQLGKGN-FGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVM 105 (327)
T ss_dssp EEEEEEEET-TEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEE
T ss_pred hhhhccCCC-CeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEE
Confidence 334455554 999999973 478999999997665455567899999999999999999999987 456799999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||+++++|.+++......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 106 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 182 (327)
T 3lxl_A 106 EYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 182 (327)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCS
T ss_pred eecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecccCCc
Confidence 99999999999987666799999999999999999999999 999999999999999999999999999987754322
Q ss_pred -ccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhh----------HHHHHHHHhhccc
Q 002826 738 -QSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLD----------VVKWVRRKINITN 806 (876)
Q Consensus 738 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~----------~~~~~~~~~~~~~ 806 (876)
........||..|+|||.+.+..++.++||||+|+++|||++|+.||.....+... ...........
T Consensus 183 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 260 (327)
T 3lxl_A 183 YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG-- 260 (327)
T ss_dssp EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT--
T ss_pred cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc--
Confidence 12233445788899999988888899999999999999999999998653322110 00111100000
Q ss_pred ccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCccc
Q 002826 807 GAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLL 862 (876)
Q Consensus 807 ~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~ 862 (876)
... .........+.+++.+||+.||++|||++|+++.|+.+.......
T Consensus 261 -~~~-------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 261 -QRL-------PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp -CCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred -cCC-------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 000 011122346889999999999999999999999999987654433
No 112
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.7e-38 Score=347.60 Aligned_cols=249 Identities=21% Similarity=0.340 Sum_probs=197.0
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecC-----CccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNF-----GCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 656 (876)
|.....+|.| +||+||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++.+++..|+|
T Consensus 26 y~~~~~lG~G-~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 104 (351)
T 3c0i_A 26 YELCEVIGKG-PFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV 104 (351)
T ss_dssp EEEEEEEEEC-SSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred eEEeeEEeeC-CCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 3334445555 4999999966 47999999998542 122467899999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHhhcc---CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCC---eEEccccchh
Q 002826 657 YEFLQMGSLGDLICRQ---DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFE---PKLTDFALDR 730 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~---~kl~DfGla~ 730 (876)
|||+++++|.+.+.+. +..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~ 181 (351)
T 3c0i_A 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAI 181 (351)
T ss_dssp EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCccee
Confidence 9999999998887543 34589999999999999999999999 9999999999999986554 9999999998
Q ss_pred hccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccc
Q 002826 731 IVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQ 810 (876)
Q Consensus 731 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (876)
....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .....+.. .. .
T Consensus 182 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~i~~---~~---~- 249 (351)
T 3c0i_A 182 QLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RLFEGIIK---GK---Y- 249 (351)
T ss_dssp ECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---HHHHHHHH---TC---C-
T ss_pred EecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---HHHHHHHc---CC---C-
Confidence 7754321 22345699999999999988899999999999999999999999976321 11111111 10 0
Q ss_pred ccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 811 VLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 811 ~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
..++.. +......+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~---~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 250 KMNPRQ---WSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CCCHHH---HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCccc---cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 011111 1122346789999999999999999999986
No 113
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.6e-37 Score=343.63 Aligned_cols=252 Identities=21% Similarity=0.270 Sum_probs=200.3
Q ss_pred hhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCcc--CHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEE
Q 002826 580 VIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQ--SSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 580 ~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 656 (876)
...|.....+|.|+ ||.||+|... +|+.||+|++...... ..+.+.+|+++++.++||||+++++++.+++..|+|
T Consensus 28 ~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 28 SDNYDVKEELGKGA-FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEeeEEecCC-CeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 33455555566555 9999999664 7999999999754322 235688999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCC---CCeEEccccchhhcc
Q 002826 657 YEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDAD---FEPKLTDFALDRIVG 733 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~---~~~kl~DfGla~~~~ 733 (876)
|||+++|+|.+++.... .+++..+..++.||+.|++|||+. +|+||||||+||+++.+ +.+||+|||+++...
T Consensus 107 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp ECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 99999999999987653 689999999999999999999999 99999999999999865 459999999998765
Q ss_pred ccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccC
Q 002826 734 EAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLD 813 (876)
Q Consensus 734 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 813 (876)
... ......||+.|+|||++.+..++.++||||+||++|||++|++||....... ....+... ......
T Consensus 183 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~--~~~~i~~~------~~~~~~ 251 (362)
T 2bdw_A 183 DSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYAQIKAG------AYDYPS 251 (362)
T ss_dssp TCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHT------CCCCCT
T ss_pred CCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHhC------CCCCCc
Confidence 432 2234568999999999998889999999999999999999999997644321 22221111 111111
Q ss_pred hhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 814 PKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 814 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
+.. ......+.+++.+||+.||++|||+.|+++.
T Consensus 252 ~~~----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 252 PEW----DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp TGG----GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccc----cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111 1223467899999999999999999998864
No 114
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=9.8e-38 Score=343.81 Aligned_cols=248 Identities=24% Similarity=0.362 Sum_probs=184.0
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCC
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQ 661 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 661 (876)
|.....+|.|| ||+||+|+.. +++.||||++... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 55 y~~~~~lG~G~-~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 55 FEVESELGRGA-TSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp EEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEeeEEeeCC-CEEEEEEEECCCCcEEEEEEeccc--hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 33344455555 9999999775 6889999999754 345678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC---CCCeEEccccchhhccccccc
Q 002826 662 MGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA---DFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 662 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~---~~~~kl~DfGla~~~~~~~~~ 738 (876)
+++|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++......
T Consensus 132 ~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-- 205 (349)
T 2w4o_A 132 GGELFDRIVEKG-YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV-- 205 (349)
T ss_dssp SCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCccc--
Confidence 999999997654 689999999999999999999999 9999999999999975 8899999999998765432
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||............. .... .....+.
T Consensus 206 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i----~~~~---~~~~~~~--- 274 (349)
T 2w4o_A 206 -LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRI----LNCE---YYFISPW--- 274 (349)
T ss_dssp --------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHH----HTTC---CCCCTTT---
T ss_pred -ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHH----HhCC---CccCCch---
Confidence 1233458999999999998889999999999999999999999997654433211111 1111 1111111
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
+......+.+++.+||+.||++|||+.|+++.
T Consensus 275 -~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 275 -WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -hhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11223467899999999999999999999874
No 115
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.9e-38 Score=359.10 Aligned_cols=246 Identities=24% Similarity=0.442 Sum_probs=199.7
Q ss_pred cCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCC-eEEEEEEcCCCCC
Q 002826 586 KSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDE-SIFLIYEFLQMGS 664 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~gs 664 (876)
...+|.|+ ||.||+|.. .|+.||||++... ...+.+.+|++++++++||||+++++++.+.+ ..|+||||+++|+
T Consensus 198 ~~~lG~G~-fg~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~ 273 (450)
T 1k9a_A 198 LQTIGKGE-FGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273 (450)
T ss_dssp EEEEEECS-SEEEEEEEE-TTEEEEEEEESSC--TTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCB
T ss_pred EeeecCcC-CeeEEEEEe-cCCeEEEEEeCCc--hHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCc
Confidence 34555555 999999988 4889999999754 35678999999999999999999999987765 7999999999999
Q ss_pred HHHHhhccCC-cCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccccccc
Q 002826 665 LGDLICRQDF-QLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSS 743 (876)
Q Consensus 665 L~~~l~~~~~-~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~ 743 (876)
|.+++.+.+. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 274 L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-----~~ 345 (450)
T 1k9a_A 274 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DT 345 (450)
T ss_dssp HHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC----------
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc-----cC
Confidence 9999987643 479999999999999999999999 99999999999999999999999999998543221 12
Q ss_pred ccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHH
Q 002826 744 EYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQ 822 (876)
Q Consensus 744 ~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 822 (876)
..++..|+|||.+.+..++.++||||||+++|||+| |+.||....... ....+...... . .+..
T Consensus 346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~~----------~---~p~~ 410 (450)
T 1k9a_A 346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKGYKM----------D---APDG 410 (450)
T ss_dssp -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHHTTCCC----------C---CCTT
T ss_pred CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCC----------C---CCCc
Confidence 246788999999988899999999999999999998 999998654432 22222211100 0 0112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 823 QMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 823 ~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
.+..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 411 ~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 411 CPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 234678999999999999999999999999998654
No 116
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.5e-38 Score=350.12 Aligned_cols=246 Identities=20% Similarity=0.289 Sum_probs=192.5
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc---cCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC---QSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 656 (876)
+|.....+|.|| ||.||+|+.+ +++.||+|++.+... .....+.+|..++.++ +||||+++++++.+.+..|+|
T Consensus 53 ~y~~~~~LG~G~-fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 53 DFDLLRVIGRGS-YAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred HcEEEEEEeeCC-CeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 344445566555 9999999765 688999999976422 2335678899999887 899999999999999999999
Q ss_pred EEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccc
Q 002826 657 YEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 736 (876)
|||+++|+|.+++.+.+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 132 ~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 207 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 207 (396)
T ss_dssp EECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccCC
Confidence 99999999999997654 699999999999999999999999 99999999999999999999999999997633221
Q ss_pred cccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchh---hHHHHHHHHh-hccccccccc
Q 002826 737 FQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESL---DVVKWVRRKI-NITNGAIQVL 812 (876)
Q Consensus 737 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~ 812 (876)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .......... ....
T Consensus 208 --~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 279 (396)
T 4dc2_A 208 --DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 279 (396)
T ss_dssp --CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------
T ss_pred --CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------
Confidence 123445699999999999999999999999999999999999999975332111 0111111111 1110
Q ss_pred ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCH
Q 002826 813 DPKIANCYQQQMLGALEIALRCTSVMPEKRPSM 845 (876)
Q Consensus 813 d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~ 845 (876)
.+ +......+.+++.+||+.||++||++
T Consensus 280 --~~---p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 --RI---PRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp --CC---CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred --CC---CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 00 11123457899999999999999996
No 117
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.8e-38 Score=346.25 Aligned_cols=258 Identities=22% Similarity=0.329 Sum_probs=204.7
Q ss_pred ccccCCCCCCCCceEEEEEEeC------CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP------SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFL 655 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 655 (876)
|.....+|.|| ||.||+|... +++.||+|++..... .....+.+|+++++.++||||+++++++.+.+..++
T Consensus 27 y~~~~~lg~G~-~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 105 (322)
T 1p4o_A 27 ITMSRELGQGS-FGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 105 (322)
T ss_dssp EEEEEEEEECS-SSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeeeEeccCC-ceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEE
Confidence 33334455554 9999999653 478899999865422 233568899999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHhhccC---------CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccc
Q 002826 656 IYEFLQMGSLGDLICRQD---------FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDF 726 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~Df 726 (876)
||||+++|+|.+++.... ..+++..+.+++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~Df 182 (322)
T 1p4o_A 106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 182 (322)
T ss_dssp EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCT
T ss_pred EEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEECcC
Confidence 999999999999987532 3578999999999999999999999 9999999999999999999999999
Q ss_pred cchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcc
Q 002826 727 ALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINIT 805 (876)
Q Consensus 727 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 805 (876)
|+++...............+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||....... ....+.. ..
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~---~~ 257 (322)
T 1p4o_A 183 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ--VLRFVME---GG 257 (322)
T ss_dssp TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH--HHHHHHT---TC
T ss_pred ccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH--HHHHHHc---CC
Confidence 99987765443333444557889999999888889999999999999999999 899987644322 1111111 10
Q ss_pred cccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 806 NGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 806 ~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
. ... ....+..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 258 --~-~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 258 --L-LDK-------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp --C-CCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred --c-CCC-------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence 0 000 1122345789999999999999999999999999986643
No 118
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.2e-37 Score=351.34 Aligned_cols=339 Identities=17% Similarity=0.168 Sum_probs=278.5
Q ss_pred EEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCC
Q 002826 76 TVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGS 155 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~ 155 (876)
++..+++.++++++. | .++.+++|++|+|++|.+++. | ++.+++|++|+|++|. +++. | +++
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~----------l~~~-~--~~~ 104 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNK----------LTNL-D--VTP 104 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSC----------CSCC-C--CTT
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCC----------Ccee-e--cCC
Confidence 467799999999975 4 799999999999999999985 4 8899999988666554 4443 3 788
Q ss_pred ccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEE
Q 002826 156 LVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSIL 235 (876)
Q Consensus 156 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 235 (876)
+++|++|+|++|++++. | ++++++|++|++++|+ +..+| ++.+++|++|++++|+..+.+ .+..+++|++|
T Consensus 105 l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~--l~~l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L 175 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNT--LTEID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTL 175 (457)
T ss_dssp CTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSC--CSCCC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEE
T ss_pred CCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCc--cceec--cccCCcCCEEECCCCCccccc--ccccCCcCCEE
Confidence 89999999999999864 4 8889999999999998 44454 788899999999999655544 47888999999
Q ss_pred ecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccC
Q 002826 236 DLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGF 315 (876)
Q Consensus 236 ~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 315 (876)
++++|+++ .+| +..+++|+.|++++|++++. .+..+++|++|++++|++++ +| +..+++|+.|++++|++
T Consensus 176 ~ls~n~l~-~l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l 245 (457)
T 3bz5_A 176 DCSFNKIT-ELD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPL 245 (457)
T ss_dssp ECCSSCCC-CCC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCC
T ss_pred ECCCCccc-eec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcC
Confidence 99999998 466 34688999999999999865 37888999999999999997 45 88889999999999999
Q ss_pred CCCCCcccCCCC-------cccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCC--------ccccccCccEE
Q 002826 316 SGDFPDKLWSLP-------RIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQ--------GLGSVKSLYRF 380 (876)
Q Consensus 316 ~~~~p~~~~~l~-------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~--------~~~~l~~L~~L 380 (876)
++..+..+.+++ +|+.|++++|++.+.+| +..+++|+.|++++|+..+.+|. .+.+.++|+.|
T Consensus 246 ~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L 323 (457)
T 3bz5_A 246 TELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYL 323 (457)
T ss_dssp SCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEE
T ss_pred CCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEE
Confidence 987766666555 56677777777776666 56788999999999987766654 25566899999
Q ss_pred eCCCccccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccc
Q 002826 381 SASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTG 460 (876)
Q Consensus 381 ~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 460 (876)
++++|++++. + +..+++|+.|++++|+|++ ++.|..|++++|+++|. ..+..|+.+++++|+++|
T Consensus 324 ~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~-------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g 388 (457)
T 3bz5_A 324 YLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD-------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTI 388 (457)
T ss_dssp ECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB-------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEE
T ss_pred ECCCCccccc-c--cccCCcCcEEECCCCCCCC-------ccccccccccCCcEEec-----ceeeecCccccccCcEEE
Confidence 9999999985 3 8999999999999999986 35677889999999976 466778899999999999
Q ss_pred cCCCcccc
Q 002826 461 PIPQGLQN 468 (876)
Q Consensus 461 ~~p~~~~~ 468 (876)
.+|..+..
T Consensus 389 ~ip~~~~~ 396 (457)
T 3bz5_A 389 AVSPDLLD 396 (457)
T ss_dssp ECCTTCBC
T ss_pred EcChhHhc
Confidence 99987554
No 119
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.5e-38 Score=364.72 Aligned_cols=255 Identities=24% Similarity=0.374 Sum_probs=208.0
Q ss_pred ccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCC
Q 002826 585 EKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMG 663 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 663 (876)
....+|.|+ ||.||+|.+. +++.||||++.... ...+++.+|++++++++||||++++++|.+.+..++||||+++|
T Consensus 224 ~~~~lG~G~-fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g 301 (495)
T 1opk_A 224 MKHKLGGGQ-YGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG 301 (495)
T ss_dssp EEEESGGGT-TSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred eeeEecCCC-CeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCC
Confidence 334566555 9999999876 48999999986543 45788999999999999999999999999999999999999999
Q ss_pred CHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccccc
Q 002826 664 SLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMS 742 (876)
Q Consensus 664 sL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 742 (876)
+|.+++.+. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....
T Consensus 302 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~ 377 (495)
T 1opk_A 302 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY-TAHA 377 (495)
T ss_dssp BHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE-ECCT
T ss_pred CHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCce-eecC
Confidence 999999764 45689999999999999999999999 999999999999999999999999999987654322 2223
Q ss_pred cccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcH
Q 002826 743 SEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQ 821 (876)
Q Consensus 743 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 821 (876)
...++..|+|||.+....++.++|||||||++|||+| |+.||....... ..+.+...... . ...
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~~~----------~---~~~ 442 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLEKDYRM----------E---RPE 442 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTTCCC----------C---CCT
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCC----------C---CCC
Confidence 3446788999999988889999999999999999999 999998654432 22222211110 0 011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 822 QQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 822 ~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
..+..+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 443 ~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 481 (495)
T 1opk_A 443 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 481 (495)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSSC
T ss_pred CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhccc
Confidence 223467899999999999999999999999999875543
No 120
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.1e-38 Score=342.32 Aligned_cols=250 Identities=22% Similarity=0.308 Sum_probs=196.9
Q ss_pred cCCCCCCCCceEEEEEEeC-CC-------cEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 586 KSSAGNGGPFGRVYILSLP-SG-------ELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
...+|.| +||+||+|... ++ ..||+|++........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 13 ~~~lg~G-~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 13 NESLGQG-TFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEE-TTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeccC-CCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence 3445554 49999999654 33 579999997766566788999999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCC--------eEEccccch
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFE--------PKLTDFALD 729 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~--------~kl~DfGla 729 (876)
||+++++|.+++.+....+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 92 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~ 168 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168 (289)
T ss_dssp ECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSC
T ss_pred ECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeeccCccc
Confidence 99999999999988766699999999999999999999999 9999999999999998877 999999998
Q ss_pred hhccccccccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccc
Q 002826 730 RIVGEAAFQSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGA 808 (876)
Q Consensus 730 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (876)
+...... ...||+.|+|||.+.+ ..++.++||||||+++|||++|..|+........ .......... .
T Consensus 169 ~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-~~~~~~~~~~----~ 237 (289)
T 4fvq_A 169 ITVLPKD------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-KLQFYEDRHQ----L 237 (289)
T ss_dssp TTTSCHH------HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHHHHTTCC----C
T ss_pred ccccCcc------ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-HHHHhhccCC----C
Confidence 7654322 2237888999999876 6789999999999999999996555443222211 1111111001 0
Q ss_pred ccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcc
Q 002826 809 IQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSL 861 (876)
Q Consensus 809 ~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~ 861 (876)
... ....+.+++.+||+.||++|||++|+++.|+++......
T Consensus 238 ~~~-----------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 238 PAP-----------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp CCC-----------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred CCC-----------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 011 122467899999999999999999999999999875443
No 121
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.2e-38 Score=336.38 Aligned_cols=248 Identities=25% Similarity=0.357 Sum_probs=187.2
Q ss_pred cCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCc----cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCC
Q 002826 586 KSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGC----QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQ 661 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 661 (876)
...+|.|| ||.||+|.. .|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+++..++||||++
T Consensus 12 ~~~lg~G~-~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 12 EEIIGIGG-FGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEET-TEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeccCC-CeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCC
Confidence 34455555 999999987 489999999865322 234678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC--------CCCeEEccccchhhcc
Q 002826 662 MGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA--------DFEPKLTDFALDRIVG 733 (876)
Q Consensus 662 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~--------~~~~kl~DfGla~~~~ 733 (876)
+++|.+++.. ..+++..+..++.|++.|++|||+.+..+|+||||||+||+++. ++.+||+|||+++...
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~ 167 (271)
T 3dtc_A 90 GGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH 167 (271)
T ss_dssp TEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-----
T ss_pred CCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccc
Confidence 9999999864 46899999999999999999999993223999999999999986 6789999999998765
Q ss_pred ccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccC
Q 002826 734 EAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLD 813 (876)
Q Consensus 734 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 813 (876)
.... ....||+.|+|||...+..++.++||||+|+++|||++|+.||......... . ...... .....
T Consensus 168 ~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~--~---~~~~~~--~~~~~- 235 (271)
T 3dtc_A 168 RTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA--Y---GVAMNK--LALPI- 235 (271)
T ss_dssp ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH--H---HHHTSC--CCCCC-
T ss_pred cccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--H---hhhcCC--CCCCC-
Confidence 4321 2345899999999998888999999999999999999999999864432211 1 111000 00000
Q ss_pred hhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002826 814 PKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSL 855 (876)
Q Consensus 814 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i 855 (876)
....+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 236 ------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 236 ------PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ------CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111234678999999999999999999999999864
No 122
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=345.08 Aligned_cols=247 Identities=20% Similarity=0.305 Sum_probs=196.3
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
|.....+|. |+||.||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..|+|||
T Consensus 17 y~i~~~LG~-G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e 95 (384)
T 4fr4_A 17 FEILRAIGK-GSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVD 95 (384)
T ss_dssp EEEEEEEEC-CTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEee-CCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 333444555 459999999764 68999999996532 2445678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
|+++|+|.+++.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 96 ~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-- 169 (384)
T 4fr4_A 96 LLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET-- 169 (384)
T ss_dssp CCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCCC--
Confidence 99999999999765 3699999999999999999999999 99999999999999999999999999998765432
Q ss_pred cccccccccccccCccccCC---CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChh
Q 002826 739 STMSSEYALSCYNAPEYGYS---KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPK 815 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 815 (876)
......||+.|+|||++.. ..++.++||||+||++|||++|+.||......... ...........
T Consensus 170 -~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~--~~~~~~~~~~~--------- 237 (384)
T 4fr4_A 170 -QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK--EIVHTFETTVV--------- 237 (384)
T ss_dssp -CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH--HHHHHHHHCCC---------
T ss_pred -ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH--HHHHHHhhccc---------
Confidence 2344569999999999863 45889999999999999999999999864433221 11111111110
Q ss_pred hhhhcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 002826 816 IANCYQQQMLGALEIALRCTSVMPEKRPS-MFEVVK 850 (876)
Q Consensus 816 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs-~~ell~ 850 (876)
..+......+.+++.+||+.||++||+ ++++.+
T Consensus 238 --~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 --TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp --CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred --CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 001112346789999999999999998 677664
No 123
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=344.80 Aligned_cols=256 Identities=22% Similarity=0.372 Sum_probs=196.6
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcE----EEEEEEecC-CccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGEL----IAVKKLVNF-GCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 656 (876)
|.....+|.|| ||+||+|... +++. ||+|.+... .......+.+|+.++++++||||+++++++..+. .++|
T Consensus 17 y~~~~~lG~G~-~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v 94 (327)
T 3lzb_A 17 FKKIKVLGSGA-FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLI 94 (327)
T ss_dssp EEEEEEEEECS-SEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEE
T ss_pred ceEEEEeeeCC-CeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEE
Confidence 34445555555 9999999753 5554 467766433 2345678999999999999999999999998754 7899
Q ss_pred EEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccc
Q 002826 657 YEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 736 (876)
+||+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp ECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 999999999999988777899999999999999999999999 99999999999999999999999999998876443
Q ss_pred cccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChh
Q 002826 737 FQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPK 815 (876)
Q Consensus 737 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 815 (876)
.........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........ ...+....... ..
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~~~~~~~~~~------~~-- 241 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--SSILEKGERLP------QP-- 241 (327)
T ss_dssp --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHHHTTCCCC------CC--
T ss_pred ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHHHcCCCCC------CC--
Confidence 3333344457888999999988899999999999999999999 9999987554432 22222111000 00
Q ss_pred hhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 816 IANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 816 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 242 -----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 242 -----PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -----ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 11223578999999999999999999999999998754
No 124
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=9.2e-38 Score=336.10 Aligned_cols=263 Identities=18% Similarity=0.204 Sum_probs=204.1
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEE-EeCCeEEEEEEcC
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFF-HSDESIFLIYEFL 660 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~ 660 (876)
|.....+|.|+ ||+||+|.. .+++.||+|++.... ....+.+|+++++.++|++++..++++ .+.+..++||||+
T Consensus 11 y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 4hgt_A 11 YRLGRKIGSGS-FGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp CEEEEEEEECS-SSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred eEEeeeecCCC-CeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence 33344455554 999999975 589999999875532 334588899999999988877777766 5677889999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceee---CCCCCeEEccccchhhcccccc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILL---DADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll---~~~~~~kl~DfGla~~~~~~~~ 737 (876)
+++|.+++......+++..+..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||+++.......
T Consensus 88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp -CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred -CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 8899999987666899999999999999999999999 99999999999999 7889999999999987654322
Q ss_pred c-----cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchh-h-HHHHHHHHhhccccccc
Q 002826 738 Q-----STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESL-D-VVKWVRRKINITNGAIQ 810 (876)
Q Consensus 738 ~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 810 (876)
. .......||+.|+|||...+..++.++|||||||++|||++|+.||........ . ............
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----- 238 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP----- 238 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-----
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch-----
Confidence 1 122345689999999999998999999999999999999999999986443221 1 111111111110
Q ss_pred ccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCccc
Q 002826 811 VLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLL 862 (876)
Q Consensus 811 ~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~ 862 (876)
........+..+.+++.+||+.||++|||++|+++.|+++.++....
T Consensus 239 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~ 285 (296)
T 4hgt_A 239 -----IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp -----HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCC
T ss_pred -----hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 00111122346889999999999999999999999999988765543
No 125
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.2e-37 Score=335.24 Aligned_cols=264 Identities=18% Similarity=0.202 Sum_probs=206.1
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEE-EeCCeEEEEEEc
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFF-HSDESIFLIYEF 659 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~ 659 (876)
+|.....+|.|+ ||.||+|+. .+|+.||+|++.... ..+.+.+|+.+++.++|++++..++++ .+.+..++||||
T Consensus 10 ~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 10 RYRLGRKIGSGS-FGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TEEEEEEEEEET-TEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred EEEEEEEEccCC-CeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 344444555555 999999975 689999999986543 345688999999999998877777665 557788999999
Q ss_pred CCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeC---CCCCeEEccccchhhccccc
Q 002826 660 LQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLD---ADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 660 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~---~~~~~kl~DfGla~~~~~~~ 736 (876)
+ +++|.+++......+++..+..++.|++.|++|||+. +|+||||||+||+++ .++.+||+|||+++......
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (296)
T 3uzp_A 87 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred c-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence 9 8899999986666899999999999999999999999 999999999999994 78999999999998765432
Q ss_pred cc-----cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcch-hhHH-HHHHHHhhcccccc
Q 002826 737 FQ-----STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAES-LDVV-KWVRRKINITNGAI 809 (876)
Q Consensus 737 ~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~-~~~~-~~~~~~~~~~~~~~ 809 (876)
.. .......||+.|+|||...+..++.++||||||+++|||++|+.||....... .... ..........
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---- 238 (296)
T 3uzp_A 163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP---- 238 (296)
T ss_dssp TCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC----
T ss_pred cccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc----
Confidence 21 11234568999999999999899999999999999999999999998644322 1111 1111111111
Q ss_pred cccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCccc
Q 002826 810 QVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLL 862 (876)
Q Consensus 810 ~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~ 862 (876)
........+..+.+++.+||+.||++|||+.|+++.|+++..+....
T Consensus 239 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 285 (296)
T 3uzp_A 239 ------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp ------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred ------hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCc
Confidence 00111122346889999999999999999999999999997766554
No 126
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.5e-38 Score=346.90 Aligned_cols=257 Identities=24% Similarity=0.397 Sum_probs=203.7
Q ss_pred ccCCCCCCCCceEEEEEEe--------CCCcEEEEEEEecCCc-cCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEE
Q 002826 585 EKSSAGNGGPFGRVYILSL--------PSGELIAVKKLVNFGC-QSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIF 654 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~--------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 654 (876)
....+|.|| ||.||+|+. .+++.||+|++..... .....+.+|+++++++ +||||+++++++.+++..+
T Consensus 39 ~~~~lG~G~-~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 117 (334)
T 2pvf_A 39 LGKPLGEGA-FGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 117 (334)
T ss_dssp EEEEEEECS-SCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCE
T ss_pred EeeEEeecC-ceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceE
Confidence 334455554 999999975 3578899999865432 2345688999999999 8999999999999999999
Q ss_pred EEEEcCCCCCHHHHhhccC---------------CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCC
Q 002826 655 LIYEFLQMGSLGDLICRQD---------------FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADF 719 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~ 719 (876)
+||||+++|+|.+++.... ..+++..+.+++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 118 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 194 (334)
T 2pvf_A 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENN 194 (334)
T ss_dssp EEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTC
T ss_pred EEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEcCCC
Confidence 9999999999999997653 2489999999999999999999999 999999999999999999
Q ss_pred CeEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHH
Q 002826 720 EPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWV 798 (876)
Q Consensus 720 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~ 798 (876)
.+||+|||+++...............+|+.|+|||...+..++.++||||||+++|||++ |+.||....... ....+
T Consensus 195 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~ 272 (334)
T 2pvf_A 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLL 272 (334)
T ss_dssp CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHH
T ss_pred CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH--HHHHH
Confidence 999999999987764433333344457888999999888888999999999999999999 999997654332 22222
Q ss_pred HHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 799 RRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 799 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
...... .. .......+.+++.+||+.||++|||+.|+++.|+++.+...
T Consensus 273 ~~~~~~------~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 273 KEGHRM------DK-------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHTCCC------CC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred hcCCCC------CC-------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 211100 00 11123457899999999999999999999999999875433
No 127
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.6e-37 Score=340.01 Aligned_cols=249 Identities=22% Similarity=0.348 Sum_probs=193.3
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCC--------
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDE-------- 651 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 651 (876)
+|.....+|.|| ||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 7 ~y~~~~~lG~G~-~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 7 DFEPIQCMGRGG-FGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HEEEEEEEECC--CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred cCceeeEecCCC-CeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 454555666665 9999999775 899999999975432 34567899999999999999999999986643
Q ss_pred -------------------------------------------------eEEEEEEcCCCCCHHHHhhccC--CcCCHHH
Q 002826 652 -------------------------------------------------SIFLIYEFLQMGSLGDLICRQD--FQLQWSI 680 (876)
Q Consensus 652 -------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~--~~l~~~~ 680 (876)
..++||||+++++|.+++.+.. ...++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 3899999999999999997653 3456778
Q ss_pred HHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc----------ccccccccccccc
Q 002826 681 RLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF----------QSTMSSEYALSCY 750 (876)
Q Consensus 681 ~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~----------~~~~~~~~gt~~y 750 (876)
+.+++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ........||+.|
T Consensus 166 ~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 999999999999999999 999999999999999999999999999987764321 1123345689999
Q ss_pred cCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHH
Q 002826 751 NAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEI 830 (876)
Q Consensus 751 ~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l 830 (876)
+|||.+.+..++.++||||+|+++|||++|..|+.. . .......... ............+.++
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----~---~~~~~~~~~~----------~~~~~~~~~~~~~~~l 305 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----R---VRIITDVRNL----------KFPLLFTQKYPQEHMM 305 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----H---HHHHHHHHTT----------CCCHHHHHHCHHHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----H---HHHHHHhhcc----------CCCcccccCChhHHHH
Confidence 999999888899999999999999999998765311 1 1111111111 1111222334466899
Q ss_pred HHHccCCCCCCCCCHHHHHHH
Q 002826 831 ALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 831 i~~cl~~dP~~RPs~~ell~~ 851 (876)
+.+||+.||++|||+.|+++.
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHccCCCCcCCCHHHHhhc
Confidence 999999999999999999863
No 128
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-38 Score=344.32 Aligned_cols=257 Identities=23% Similarity=0.367 Sum_probs=197.5
Q ss_pred CCCCCCCCceEEEEEEeCC-----CcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 587 SSAGNGGPFGRVYILSLPS-----GELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
..+|.|| ||+||+|.... +..||+|++..... .....+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 50 ~~lG~G~-~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 50 KVIGAGE-FGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEECS-SSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred cEEecCC-CeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 4455555 99999996542 34699999975432 23456889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc-cc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF-QS 739 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~-~~ 739 (876)
++++|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 129 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 205 (333)
T 1mqb_A 129 ENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY 205 (333)
T ss_dssp TTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC------------
T ss_pred CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhcccccccc
Confidence 99999999987767899999999999999999999999 999999999999999999999999999987754321 11
Q ss_pred ccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 740 TMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 740 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
......+|..|+|||.+....++.++||||||+++|||++ |+.||....... ....+..... ....
T Consensus 206 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~~~~~~~~------~~~~----- 272 (333)
T 1mqb_A 206 TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VMKAINDGFR------LPTP----- 272 (333)
T ss_dssp -----CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTTCC------CCCC-----
T ss_pred ccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHCCCc------CCCc-----
Confidence 2223346788999999988889999999999999999999 999997644322 2222111100 0000
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCccc
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLL 862 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~ 862 (876)
......+.+++.+||+.||++||++.|+++.|+++.......
T Consensus 273 --~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~ 314 (333)
T 1mqb_A 273 --MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSL 314 (333)
T ss_dssp --TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGG
T ss_pred --ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhh
Confidence 112345789999999999999999999999999987654443
No 129
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-38 Score=337.87 Aligned_cols=252 Identities=19% Similarity=0.293 Sum_probs=203.3
Q ss_pred CCCCCCCceEEEEEEeC---CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCC
Q 002826 588 SAGNGGPFGRVYILSLP---SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMG 663 (876)
Q Consensus 588 ~~g~~g~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 663 (876)
.+|.|+ ||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 17 ~lg~G~-~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 17 ELGCGN-FGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEECCT-TEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred cccccC-ceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 455555 9999999653 688899999976432 2346788999999999999999999999 556799999999999
Q ss_pred CHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc-ccccc
Q 002826 664 SLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF-QSTMS 742 (876)
Q Consensus 664 sL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~-~~~~~ 742 (876)
+|.+++......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....... .....
T Consensus 95 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 171 (287)
T 1u59_A 95 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 171 (287)
T ss_dssp EHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCC
T ss_pred CHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccc
Confidence 99999987767799999999999999999999999 999999999999999999999999999987753322 12233
Q ss_pred cccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcH
Q 002826 743 SEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQ 821 (876)
Q Consensus 743 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 821 (876)
...+|+.|+|||...+..++.++||||+|+++|||++ |+.||....... ....+... ...... .
T Consensus 172 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~i~~~------~~~~~~-------~ 236 (287)
T 1u59_A 172 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQG------KRMECP-------P 236 (287)
T ss_dssp SSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHHHHTT------CCCCCC-------T
T ss_pred cccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHhcC------CcCCCC-------C
Confidence 3456889999999888888999999999999999998 999997654322 22222111 001111 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 822 QQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 822 ~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
..+..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 237 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 274 (287)
T 1u59_A 237 ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274 (287)
T ss_dssp TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 22346889999999999999999999999999986543
No 130
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.1e-38 Score=356.15 Aligned_cols=254 Identities=20% Similarity=0.257 Sum_probs=200.4
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
+|.....+|.|| ||+||+|+.. +++.||+|++.+.. ......+.+|+.+++.++||||++++++|.+++..|+||
T Consensus 75 ~y~~~~~LG~G~-fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~ 153 (437)
T 4aw2_A 75 DFEILKVIGRGA-FGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM 153 (437)
T ss_dssp GEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred heEEEEEEEeCC-CEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEE
Confidence 444455566655 9999999775 58899999996521 123345889999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||+++|+|.+++.+....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 154 Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 154 DYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp CCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred ecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 99999999999987666899999999999999999999999 999999999999999999999999999977654322
Q ss_pred ccccccccccccccCccccC-----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccccc
Q 002826 738 QSTMSSEYALSCYNAPEYGY-----SKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVL 812 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (876)
.......||+.|+|||++. ...++.++||||+||++|||++|++||........ ............ .
T Consensus 231 -~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-~~~i~~~~~~~~--~---- 302 (437)
T 4aw2_A 231 -VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKIMNHKERFQ--F---- 302 (437)
T ss_dssp -EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTHHHHCC--C----
T ss_pred -cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-HHhhhhcccccc--C----
Confidence 2233456999999999876 55689999999999999999999999987543322 111111110110 0
Q ss_pred ChhhhhhcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002826 813 DPKIANCYQQQMLGALEIALRCTSVMPEK--RPSMFEVVKA 851 (876)
Q Consensus 813 d~~~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~ell~~ 851 (876)
|. ........+.+++.+|+..+|++ ||+++|+++.
T Consensus 303 -p~---~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 303 -PT---QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp -CS---SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred -Cc---ccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00 00112345789999999988888 9999999874
No 131
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=347.19 Aligned_cols=273 Identities=16% Similarity=0.127 Sum_probs=208.7
Q ss_pred cccccCCCCCCCCceEEEEEEeCC---------CcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccc----------
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLPS---------GELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVK---------- 642 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 642 (876)
+|.....+|.| +||.||+|.... ++.||+|++... ..+.+|++++++++||||++
T Consensus 43 ~y~~~~~lg~G-~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 43 QWKLKSFQTRD-NQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp EEEEEEEEEEE-TTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred eEEEEEEecCC-CCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 34444455555 599999997753 889999998653 46889999999999999998
Q ss_pred -----eeeEEEe-CCeEEEEEEcCCCCCHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceee
Q 002826 643 -----VLGFFHS-DESIFLIYEFLQMGSLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILL 715 (876)
Q Consensus 643 -----~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll 715 (876)
+++++.. ++..++||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEE
Confidence 6777776 67899999999 99999999865 45799999999999999999999999 99999999999999
Q ss_pred CCCC--CeEEccccchhhccccccc-----cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 002826 716 DADF--EPKLTDFALDRIVGEAAFQ-----STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEP 788 (876)
Q Consensus 716 ~~~~--~~kl~DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~ 788 (876)
+.++ .+||+|||+++........ .......||+.|+|||...+..++.++||||||+++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9988 9999999999876543211 11233468999999999998899999999999999999999999998754
Q ss_pred cchhhHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcccccccCC
Q 002826 789 AESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLLSIELSS 868 (876)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~~~~~~~ 868 (876)
................. ....++.. .+......+.+++.+||+.||++|||++|+++.|+++.++.........+
T Consensus 273 ~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~~~d 347 (352)
T 2jii_A 273 PNTEDIMKQKQKFVDKP---GPFVGPCG--HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDPIG 347 (352)
T ss_dssp TCHHHHHHHHHHHHHSC---CCEECTTS--CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCTTSCCC
T ss_pred cCHHHHHHHHHhccCCh---hhhhhhcc--ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCcCcccc
Confidence 33333333322221111 11111100 00112346889999999999999999999999999998776655433333
Q ss_pred C
Q 002826 869 S 869 (876)
Q Consensus 869 ~ 869 (876)
|
T Consensus 348 w 348 (352)
T 2jii_A 348 L 348 (352)
T ss_dssp C
T ss_pred C
Confidence 3
No 132
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.8e-38 Score=360.54 Aligned_cols=253 Identities=25% Similarity=0.394 Sum_probs=199.7
Q ss_pred CCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCCCHH
Q 002826 587 SSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMGSLG 666 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 666 (876)
..+|.|+ ||.||+|...++..||||++.... ...+.+.+|++++++++||||+++++++.+ +..++||||+++|+|.
T Consensus 190 ~~lG~G~-fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 190 VKLGQGC-FGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEECS-SCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeecCCC-CeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 4455555 999999999888899999987543 456789999999999999999999999876 6789999999999999
Q ss_pred HHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccccccccc
Q 002826 667 DLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSSEY 745 (876)
Q Consensus 667 ~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 745 (876)
+++... +..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .......
T Consensus 267 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~ 342 (452)
T 1fmk_A 267 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAK 342 (452)
T ss_dssp HHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---------------
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCce-ecccCCc
Confidence 999754 34689999999999999999999999 999999999999999999999999999987654321 1222334
Q ss_pred ccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHHHH
Q 002826 746 ALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQM 824 (876)
Q Consensus 746 gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 824 (876)
++..|+|||.+....++.++||||||+++|||++ |+.||....... ....+..... .... ...+
T Consensus 343 ~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~------~~~~-------~~~~ 407 (452)
T 1fmk_A 343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGYR------MPCP-------PECP 407 (452)
T ss_dssp CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCC------CCCC-------TTSC
T ss_pred ccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC------CCCC-------CCCC
Confidence 6788999999888889999999999999999999 999997644322 2222211110 0011 1223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcc
Q 002826 825 LGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSL 861 (876)
Q Consensus 825 ~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~ 861 (876)
..+.+++.+||+.||++|||++++++.|+++......
T Consensus 408 ~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~ 444 (452)
T 1fmk_A 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444 (452)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence 4678999999999999999999999999998765443
No 133
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=348.95 Aligned_cols=245 Identities=23% Similarity=0.286 Sum_probs=193.5
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecC---CccCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNF---GCQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 657 (876)
|.....+|.|+ ||.||+|+.. +|+.||+|++.+. .......+.+|..+++.+ +||||+++++++.+.+..|+||
T Consensus 25 y~~~~~lG~G~-fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~ 103 (353)
T 3txo_A 25 FEFIRVLGKGS-FGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVM 103 (353)
T ss_dssp EEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred eEEEEEEeeCC-CEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEE
Confidence 33444555555 9999999764 7999999999753 223456788899999988 7999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||+++|+|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 104 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~- 178 (353)
T 3txo_A 104 EFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG- 178 (353)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccCC-
Confidence 9999999999997654 699999999999999999999999 99999999999999999999999999997543221
Q ss_pred ccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 738 QSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...+. ...... |
T Consensus 179 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~--~~~i~---~~~~~~-----p--- 244 (353)
T 3txo_A 179 -VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL--FEAIL---NDEVVY-----P--- 244 (353)
T ss_dssp --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH---HCCCCC-----C---
T ss_pred -ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHH--HHHHH---cCCCCC-----C---
Confidence 123345699999999999888899999999999999999999999987543321 11111 111000 1
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRPSM------FEVVK 850 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RPs~------~ell~ 850 (876)
......+.+++.+|++.||++||++ .|+++
T Consensus 245 ---~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 ---TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ---CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1122357899999999999999998 77765
No 134
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.9e-37 Score=337.11 Aligned_cols=260 Identities=23% Similarity=0.365 Sum_probs=191.7
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
|.....+|.|+ ||+||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 85 (317)
T 2pmi_A 7 FKQLEKLGNGT-YATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM 85 (317)
T ss_dssp -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred eeEeeEECCCC-CEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence 34445555555 9999999764 799999999975432 34467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcc-----CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccc
Q 002826 661 QMGSLGDLICRQ-----DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEA 735 (876)
Q Consensus 661 ~~gsL~~~l~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 735 (876)
++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 161 (317)
T 2pmi_A 86 DN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161 (317)
T ss_dssp CC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred CC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence 85 999988654 24589999999999999999999999 9999999999999999999999999999876532
Q ss_pred ccccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHh-hcccccccc--
Q 002826 736 AFQSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKI-NITNGAIQV-- 811 (876)
Q Consensus 736 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-- 811 (876)
. .......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||........ ...+.... .........
T Consensus 162 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 162 V--NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ--LKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp C--CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCTTTCGGGG
T ss_pred c--ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCChhHhhhhh
Confidence 2 12334468999999999876 4689999999999999999999999986544321 22221111 000000000
Q ss_pred ----cChh--------h----h-hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 812 ----LDPK--------I----A-NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 812 ----~d~~--------~----~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
..+. + . .........+.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000 0 0 0011223468899999999999999999999874
No 135
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.1e-38 Score=347.09 Aligned_cols=264 Identities=26% Similarity=0.363 Sum_probs=203.4
Q ss_pred cccccCCCCCCCCceEEEEEEe-----CCCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeC--CeE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-----PSGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSD--ESI 653 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 653 (876)
.|++..+..|.|+||+||++.+ .+++.||||++..... .....+.+|++++++++||||+++++++.+. ...
T Consensus 31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence 4434444444455999998854 3688999999975432 2346788999999999999999999999884 678
Q ss_pred EEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcc
Q 002826 654 FLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVG 733 (876)
Q Consensus 654 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~ 733 (876)
++||||+++++|.+++.+. .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 111 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 9999999999999999765 489999999999999999999999 99999999999999999999999999998776
Q ss_pred ccccc-cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhh----------HHHHHHHHh
Q 002826 734 EAAFQ-STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLD----------VVKWVRRKI 802 (876)
Q Consensus 734 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~----------~~~~~~~~~ 802 (876)
..... .......+|..|+|||.+.+..++.++||||+|+++|||++|+.||......... .........
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 43221 2233445788899999998888899999999999999999999998764322111 111111100
Q ss_pred hcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 803 NITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 803 ~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
.. ... ......+..+.+++.+||+.||++|||+.|+++.|+++.++..
T Consensus 266 ~~---~~~-------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 266 RG---ERL-------PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp TT---CCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred cc---cCC-------CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 00 000 0111223468899999999999999999999999999876543
No 136
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.2e-37 Score=329.91 Aligned_cols=252 Identities=22% Similarity=0.304 Sum_probs=202.5
Q ss_pred hhhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEE
Q 002826 578 DLVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 578 ~l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 656 (876)
++...|.....+|.|| ||+||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 6 ~~~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 6 DINQYYTLENTIGRGS-WGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp CHHHHEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhEEeeeEEeecC-CEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 4444555555566655 9999999765 6789999999876667778899999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceee---CCCCCeEEccccchhhcc
Q 002826 657 YEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILL---DADFEPKLTDFALDRIVG 733 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll---~~~~~~kl~DfGla~~~~ 733 (876)
|||+++++|.+++.... .+++..+.+++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 85 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 85 MELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 99999999999887654 689999999999999999999999 99999999999999 788999999999998765
Q ss_pred ccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccC
Q 002826 734 EAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLD 813 (876)
Q Consensus 734 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 813 (876)
... ......||+.|+|||...+. ++.++||||+|+++|||++|+.||....... ....... .. ... .
T Consensus 161 ~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~---~~---~~~-~ 227 (277)
T 3f3z_A 161 PGK---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE--VMLKIRE---GT---FTF-P 227 (277)
T ss_dssp TTS---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH---CC---CCC-C
T ss_pred Ccc---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH--HHHHHHh---CC---CCC-C
Confidence 432 22344589999999987654 8999999999999999999999997644322 1111111 10 000 0
Q ss_pred hhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 814 PKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 814 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
+ ..+......+.+++.+|++.||++|||+.|+++
T Consensus 228 ~---~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 228 E---KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp H---HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred c---hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 111122346789999999999999999999986
No 137
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=9.2e-38 Score=338.87 Aligned_cols=243 Identities=23% Similarity=0.329 Sum_probs=198.0
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
|.....+|.|+ ||.||+|+.. +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus 8 y~~~~~lG~G~-~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e 86 (318)
T 1fot_A 8 FQILRTLGTGS-FGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD 86 (318)
T ss_dssp EEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred cEEEEEEeeCC-CEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEe
Confidence 34445555555 9999999765 79999999996531 2345678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
|+++|+|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~--- 159 (318)
T 1fot_A 87 YIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--- 159 (318)
T ss_dssp CCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc---
Confidence 999999999997654 689999999999999999999999 9999999999999999999999999999865432
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||........ ........... .+
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-----~~~i~~~~~~~----p~---- 224 (318)
T 1fot_A 160 --TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-----YEKILNAELRF----PP---- 224 (318)
T ss_dssp --BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-----HHHHHHCCCCC----CT----
T ss_pred --cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-----HHHHHhCCCCC----CC----
Confidence 2234589999999999988899999999999999999999999976443221 11111111000 01
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRP-----SMFEVVKA 851 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RP-----s~~ell~~ 851 (876)
.....+.+++.+|+..||++|| +++|+++.
T Consensus 225 ---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 225 ---FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ---TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 1223578999999999999999 88998853
No 138
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.1e-38 Score=337.51 Aligned_cols=258 Identities=23% Similarity=0.368 Sum_probs=208.6
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
+|.....+|.|| ||+||+|... +++.||+|++... ....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 14 ~~~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 91 (288)
T 3kfa_A 14 DITMKHKLGGGQ-YGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91 (288)
T ss_dssp GEEEEEESGGGT-TCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ceeEEeecCCCC-ceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcC
Confidence 333445555555 9999999775 5899999998653 244577899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccc
Q 002826 661 QMGSLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQS 739 (876)
Q Consensus 661 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 739 (876)
++++|.+++.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 92 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~ 167 (288)
T 3kfa_A 92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 167 (288)
T ss_dssp TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS-E
T ss_pred CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCcc-c
Confidence 999999999764 45699999999999999999999999 999999999999999999999999999987764332 2
Q ss_pred ccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 740 TMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 740 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
......+|+.|+|||.+.+..++.++||||+|+++|+|++ |+.||....... ..+........ ..
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--~~~~~~~~~~~------~~------ 233 (288)
T 3kfa_A 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLEKDYRM------ER------ 233 (288)
T ss_dssp EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTTCCC------CC------
T ss_pred cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHhccCCC------CC------
Confidence 2333446788999999988889999999999999999999 999998654433 22222211100 00
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
....+..+.+++.+|++.||++|||+.|+++.|+.+..+..
T Consensus 234 -~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 234 -PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp -CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 11123467899999999999999999999999999876543
No 139
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=333.82 Aligned_cols=264 Identities=19% Similarity=0.252 Sum_probs=197.2
Q ss_pred hhhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCC-----ccCHHHHHHHHHHHhhcc---CccccceeeEEEe
Q 002826 579 LVIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFG-----CQSSKTLKTEVKTLAKIR---HKNIVKVLGFFHS 649 (876)
Q Consensus 579 l~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~ 649 (876)
+..+.|++.+..|.|+||+||+|+. .+|+.||+|++.... ......+.+|++++++++ ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3344444444445555999999976 579999999986432 122457778888888875 9999999999987
Q ss_pred CC-----eEEEEEEcCCCCCHHHHhhccC-CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEE
Q 002826 650 DE-----SIFLIYEFLQMGSLGDLICRQD-FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKL 723 (876)
Q Consensus 650 ~~-----~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl 723 (876)
.. ..++||||+++ +|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred cCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 55 58999999975 9999997663 3499999999999999999999999 9999999999999999999999
Q ss_pred ccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhh
Q 002826 724 TDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKIN 803 (876)
Q Consensus 724 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 803 (876)
+|||+++...... ......||+.|+|||.+.+..++.++||||+||++|||++|++||........ ..........
T Consensus 162 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~ 237 (308)
T 3g33_A 162 ADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGKIFDLIGL 237 (308)
T ss_dssp CSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH-HHHHHHHHCC
T ss_pred eeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCC
Confidence 9999998765332 22344589999999999888899999999999999999999999987544322 2222211110
Q ss_pred cccc-cc-----------cccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 804 ITNG-AI-----------QVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 804 ~~~~-~~-----------~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
.... .. ....+.......+....+.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000 00 00001111122233456889999999999999999999986
No 140
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=352.39 Aligned_cols=271 Identities=24% Similarity=0.247 Sum_probs=208.1
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC-ccCHHHHHHHHHHHhhccCccccceeeEEEeCC--eEEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG-CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDE--SIFLIYE 658 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 658 (876)
.|.+....|.|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 3444444455559999999765 69999999997533 234577889999999999999999999998755 7899999
Q ss_pred cCCCCCHHHHhhccC--CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceee----CCCCCeEEccccchhhc
Q 002826 659 FLQMGSLGDLICRQD--FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILL----DADFEPKLTDFALDRIV 732 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll----~~~~~~kl~DfGla~~~ 732 (876)
|+++|+|.+++.+.. ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 999999999997653 2389999999999999999999999 99999999999999 77788999999999876
Q ss_pred cccccccccccccccccccCccccCC--------CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHh-h
Q 002826 733 GEAAFQSTMSSEYALSCYNAPEYGYS--------KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKI-N 803 (876)
Q Consensus 733 ~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~-~ 803 (876)
.... ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......... +...... .
T Consensus 167 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~-~~~~~~~~~ 242 (396)
T 4eut_A 167 EDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK-EVMYKIITG 242 (396)
T ss_dssp CCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCH-HHHHHHHHS
T ss_pred cCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchH-HHHHHHhcC
Confidence 5433 2234568999999998754 456789999999999999999999997644322211 1111111 1
Q ss_pred ccccccccc-------------ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 804 ITNGAIQVL-------------DPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 804 ~~~~~~~~~-------------d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
.+......+ -+............+.+++.+||+.||++|||+.|+++.++++..+..
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~~ 312 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRMV 312 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCEE
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhceE
Confidence 110000000 011113335667788999999999999999999999999999877653
No 141
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.9e-37 Score=330.15 Aligned_cols=252 Identities=21% Similarity=0.311 Sum_probs=202.2
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEc
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 659 (876)
+|.....+|.|+ ||.||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 8 ~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 8 DWDLVQTLGEGA-YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HEEEEEEEEECS-SSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ceEEEEEeecCC-CcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 444445566555 9999999765 799999999965432 3346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccc
Q 002826 660 LQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQS 739 (876)
Q Consensus 660 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 739 (876)
+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+..........
T Consensus 87 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 87 CSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp CTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 9999999998654 4689999999999999999999999 99999999999999999999999999998765433223
Q ss_pred ccccccccccccCccccCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 740 TMSSEYALSCYNAPEYGYSKKA-TAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 740 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
......|++.|+|||...+..+ +.++||||+|+++|||++|+.||............+...... . +.
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------~-~~--- 230 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--------L-NP--- 230 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT--------S-TT---
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc--------c-Cc---
Confidence 3345568999999999877654 778999999999999999999998765544333333221100 0 00
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 231 -~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 231 -WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -hhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 11123457899999999999999999999873
No 142
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-37 Score=335.92 Aligned_cols=269 Identities=21% Similarity=0.259 Sum_probs=199.8
Q ss_pred hcccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhc--cCccccceeeEEEeC----CeEE
Q 002826 581 IGMDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKI--RHKNIVKVLGFFHSD----ESIF 654 (876)
Q Consensus 581 ~~~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~----~~~~ 654 (876)
..|.....+|.|| ||.||+|+.. ++.||||++... ......+|.+++... +||||+++++++.+. ...+
T Consensus 37 ~~y~~~~~lg~G~-~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 111 (337)
T 3mdy_A 37 KQIQMVKQIGKGR-YGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111 (337)
T ss_dssp HHCEEEEEEEEET-TEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred cceEEEeEeecCC-CeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence 3454455555555 9999999874 999999998643 334455566666555 899999999999887 7899
Q ss_pred EEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccC-----CCCccccccccCceeeCCCCCeEEccccch
Q 002826 655 LIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDY-----VPHLLHRNVKSKNILLDADFEPKLTDFALD 729 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~i~H~Dlkp~NIll~~~~~~kl~DfGla 729 (876)
+||||+++|+|.+++... .+++..+.+++.|++.|++|||+.+ .++|+||||||+||+++.++.+||+|||++
T Consensus 112 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 112 LITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp EEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence 999999999999999664 5899999999999999999999862 338999999999999999999999999999
Q ss_pred hhccccccc--cccccccccccccCccccCCCCCCCc------cchHHHHHHHHHHHhC----------CCCCCCCCcch
Q 002826 730 RIVGEAAFQ--STMSSEYALSCYNAPEYGYSKKATAQ------MDAYSFGVVLLELITG----------RQAEQAEPAES 791 (876)
Q Consensus 730 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~SlGv~l~elltg----------~~p~~~~~~~~ 791 (876)
+........ .......||+.|+|||.+.+.....+ +|||||||++|||+|| +.||.......
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 776533221 11234468999999999887766665 9999999999999999 66665433322
Q ss_pred hhHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 792 LDVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
............. .....+.... ........+.+++.+||+.||++|||+.|+++.|+++.+...
T Consensus 270 ~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 270 PSYEDMREIVCIK--KLRPSFPNRW--SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp CCHHHHHHHHTTS--CCCCCCCGGG--GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred CchhhhHHHHhhh--ccCccccccc--hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 2222221111100 0111111111 122456678999999999999999999999999999987654
No 143
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4.7e-37 Score=339.87 Aligned_cols=251 Identities=22% Similarity=0.278 Sum_probs=188.5
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
.|.....+|.|| ||+||+++.. +++.||+|++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 21 ~y~~~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 21 RYDFVKDIGSGN-FGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TEEEEEEESSST-TSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cEEEEEEeccCC-CEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 344445555555 9999999765 89999999997643 34567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCC--eEEccccchhhccccccc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFE--PKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~--~kl~DfGla~~~~~~~~~ 738 (876)
++|+|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||+++......
T Consensus 99 ~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~-- 172 (361)
T 3uc3_A 99 SGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-- 172 (361)
T ss_dssp CSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccC--
Confidence 9999999997654 699999999999999999999999 9999999999999987665 9999999987543222
Q ss_pred cccccccccccccCccccCCCCCCCc-cchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQ-MDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
......||+.|+|||.+.+..+..+ +||||+||++|||++|+.||........ .....+......... |...
T Consensus 173 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~ 245 (361)
T 3uc3_A 173 -QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQRILSVKYSI-----PDDI 245 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHHHHTTCCCC-----CTTS
T ss_pred -CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHHHhcCCCCC-----CCcC
Confidence 2233458999999999877766555 8999999999999999999986443221 222222222111000 0000
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 246 ----~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 246 ----RISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ----CCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ----CCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 112357899999999999999999999875
No 144
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8.1e-38 Score=339.56 Aligned_cols=260 Identities=19% Similarity=0.265 Sum_probs=192.9
Q ss_pred cccccCCCCCCCCceEEEEEEeC----CCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeCC----
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP----SGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDE---- 651 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 651 (876)
+.+.+.+..+.|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 33444444555559999999653 355899999865432 22356889999999999999999999998754
Q ss_pred -eEEEEEEcCCCCCHHHHhhc-----cCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEcc
Q 002826 652 -SIFLIYEFLQMGSLGDLICR-----QDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTD 725 (876)
Q Consensus 652 -~~~lv~e~~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~D 725 (876)
..++||||+++++|.+++.. ....+++..+.+++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~D 190 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVAD 190 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECS
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEee
Confidence 35999999999999999843 235699999999999999999999999 999999999999999999999999
Q ss_pred ccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhc
Q 002826 726 FALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINI 804 (876)
Q Consensus 726 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 804 (876)
||+++...............+++.|+|||...+..++.++||||||+++|||++ |+.||........ ........
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~~~~~~~-- 266 (313)
T 3brb_A 191 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM--YDYLLHGH-- 266 (313)
T ss_dssp CSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HHHHHTTC--
T ss_pred cCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--HHHHHcCC--
Confidence 999987754433333344457888999999988889999999999999999999 8999976544332 22111110
Q ss_pred ccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 805 TNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 805 ~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
. ... .......+.+++.+||+.||++|||+.|+++.|+++.++.
T Consensus 267 ~----~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 267 R----LKQ-------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp C----CCC-------BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred C----CCC-------CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 0 000 1122346789999999999999999999999999987543
No 145
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.7e-38 Score=341.90 Aligned_cols=264 Identities=20% Similarity=0.286 Sum_probs=194.3
Q ss_pred hhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccC---HHHHHHHHHHHhhccCccccceeeEEEeCC----
Q 002826 580 VIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQS---SKTLKTEVKTLAKIRHKNIVKVLGFFHSDE---- 651 (876)
Q Consensus 580 ~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 651 (876)
...|.....+|.|| ||.||+|+. .+++.||+|++....... ...+.+|++++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGG-MSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp TTTEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEEEccCC-CEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 33444445555555 999999975 589999999997643333 246889999999999999999999987654
Q ss_pred eEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhh
Q 002826 652 SIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRI 731 (876)
Q Consensus 652 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~ 731 (876)
..|+||||+++++|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred ccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 3599999999999999997654 689999999999999999999999 999999999999999999999999999987
Q ss_pred ccccccc-cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccc
Q 002826 732 VGEAAFQ-STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQ 810 (876)
Q Consensus 732 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (876)
....... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ........
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-----~~~~~~~~----- 235 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-----AYQHVRED----- 235 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-----HHHHHHCC-----
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-----HHHHhcCC-----
Confidence 6543221 222344589999999999888999999999999999999999999976543322 11111110
Q ss_pred ccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCH-HHHHHHHhhcccCCc
Q 002826 811 VLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSM-FEVVKALHSLSTRTS 860 (876)
Q Consensus 811 ~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~-~ell~~L~~i~~~~~ 860 (876)
...+. ......+..+.+++.+||+.||++||++ +++...+..+.....
T Consensus 236 ~~~~~--~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~ 284 (311)
T 3ork_A 236 PIPPS--ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP 284 (311)
T ss_dssp CCCHH--HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCC
T ss_pred CCCcc--cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCC
Confidence 00011 1111234467899999999999999954 455566666544333
No 146
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.9e-37 Score=336.38 Aligned_cols=254 Identities=19% Similarity=0.264 Sum_probs=202.7
Q ss_pred hhhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCcc------CHHHHHHHHHHHhhccCccccceeeEEEeC
Q 002826 578 DLVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQ------SSKTLKTEVKTLAKIRHKNIVKVLGFFHSD 650 (876)
Q Consensus 578 ~l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 650 (876)
.+...|.....+|.|+ ||.||+|... +|+.||+|++...... ..+.+.+|+++++.++||||+++++++.+.
T Consensus 9 ~~~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 87 (321)
T 2a2a_A 9 KVEDFYDIGEELGSGQ-FAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR 87 (321)
T ss_dssp CHHHHEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhccEEEeeEeeecC-CEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 3433444445555555 9999999765 7999999999754322 357799999999999999999999999999
Q ss_pred CeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCC----CeEEccc
Q 002826 651 ESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADF----EPKLTDF 726 (876)
Q Consensus 651 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~----~~kl~Df 726 (876)
+..++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++ .+||+||
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 88 TDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp SEEEEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred CEEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 9999999999999999999764 4689999999999999999999999 999999999999999887 7999999
Q ss_pred cchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccc
Q 002826 727 ALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITN 806 (876)
Q Consensus 727 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 806 (876)
|+++...... ......||+.|+|||...+..++.++||||+|+++|||++|+.||....... ... ......
T Consensus 164 g~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~---~i~~~~- 234 (321)
T 2a2a_A 164 GLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLA---NITSVS- 234 (321)
T ss_dssp TTCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHH---HHHTTC-
T ss_pred ccceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH--HHH---HHHhcc-
Confidence 9998765432 2234458999999999988889999999999999999999999997644322 111 111111
Q ss_pred ccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 807 GAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 807 ~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
...++... ......+.+++.+||+.||++|||+.|+++.
T Consensus 235 ---~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 ---YDFDEEFF---SHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp ---CCCCHHHH---TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ---cccChhhh---cccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 01112111 1223467899999999999999999999873
No 147
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.6e-38 Score=344.70 Aligned_cols=244 Identities=23% Similarity=0.329 Sum_probs=196.0
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC---ccCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG---CQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 657 (876)
|.....+|.|+ ||.||+|+.+ +|+.||+|++.... ......+..|..+++.+ +||||+++++++.+.+..|+||
T Consensus 19 y~~~~~lG~G~-fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~ 97 (345)
T 1xjd_A 19 FILHKMLGKGS-FGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVM 97 (345)
T ss_dssp EEEEEEEEECS-SSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred eEEEEEEeeCC-CeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEE
Confidence 33344455555 9999999775 78999999997532 24456788899999987 8999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||+++|+|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 98 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 172 (345)
T 1xjd_A 98 EYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD- 172 (345)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC-
Confidence 9999999999997654 689999999999999999999999 99999999999999999999999999997643221
Q ss_pred ccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 738 QSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+.. .. +.+.
T Consensus 173 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~i~~---~~--------~~~p 238 (345)
T 1xjd_A 173 -AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--LFHSIRM---DN--------PFYP 238 (345)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH---CC--------CCCC
T ss_pred -CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHHh---CC--------CCCC
Confidence 12334568999999999998889999999999999999999999998654322 1111111 11 0011
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRPSMF-EVV 849 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~-ell 849 (876)
......+.+++.+||+.||++||++. |++
T Consensus 239 ---~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 239 ---RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ---TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ---cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11234578999999999999999997 654
No 148
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.1e-37 Score=331.75 Aligned_cols=244 Identities=23% Similarity=0.357 Sum_probs=177.9
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
+|.....+|.|+ ||.||+|.. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 14 ~y~i~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 14 NYQIVKTLGEGS-FAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CBCCCC----------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ceEEEEEEEcCC-CEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 444445555555 999999975 479999999996532 233567889999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||+ ++++.+++... ..+++..+.+++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 93 e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 93 EYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp ECC-CEEHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hhc-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 999 66888887665 3699999999999999999999999 999999999999999999999999999987654332
Q ss_pred ccccccccccccccCccccCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhh
Q 002826 738 QSTMSSEYALSCYNAPEYGYSKKA-TAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKI 816 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 816 (876)
.....||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||........ ...... ......
T Consensus 168 ---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~---~~~~~~------- 232 (275)
T 2eue_A 168 ---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL--FKNISN---GVYTLP------- 232 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH---TCCCCC-------
T ss_pred ---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHh---CCCCCC-------
Confidence 233458999999999887654 7899999999999999999999976543221 111111 110010
Q ss_pred hhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 817 ANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 817 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
......+.+++.+|++.||++|||+.|+++
T Consensus 233 ----~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 233 ----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ----TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----ccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 112335789999999999999999999976
No 149
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.2e-37 Score=342.53 Aligned_cols=244 Identities=20% Similarity=0.243 Sum_probs=198.9
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
+|.....+|.|+ ||.||+|+.. +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 42 ~y~~~~~lG~G~-~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 42 QFDRIKTLGTGS-FGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GEEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HCEEEEEeecCc-CcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 344445555555 9999999765 79999999996532 234567889999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||+++|+|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 121 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~- 195 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT- 195 (350)
T ss_dssp ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB-
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCCc-
Confidence 9999999999997654 689999999999999999999999 99999999999999999999999999998764322
Q ss_pred ccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 738 QSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
....||+.|+|||++.+..++.++||||+||++|||++|+.||....... . .......... +.
T Consensus 196 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~---~~~i~~~~~~----~p---- 258 (350)
T 1rdq_E 196 ----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--I---YEKIVSGKVR----FP---- 258 (350)
T ss_dssp ----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H---HHHHHHCCCC----CC----
T ss_pred ----ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH--H---HHHHHcCCCC----CC----
Confidence 23458999999999998889999999999999999999999998654322 1 1111111100 00
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRPS-----MFEVVKA 851 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~ell~~ 851 (876)
......+.+++.+||+.||++||+ ++|+++.
T Consensus 259 ---~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 259 ---SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ---TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 112345789999999999999998 8888763
No 150
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.2e-37 Score=341.95 Aligned_cols=245 Identities=20% Similarity=0.281 Sum_probs=192.3
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccC---HHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQS---SKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 657 (876)
|.....+|.|+ ||.||+|+.+ +++.||+|++....... .+.+.+|+.+++++ +||||+++++++.+.+..|+||
T Consensus 11 y~~~~~lG~G~-fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~ 89 (345)
T 3a8x_A 11 FDLLRVIGRGS-YAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 89 (345)
T ss_dssp EEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred eEEEEEEEecC-CeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEE
Confidence 44445555555 9999999765 68999999997643222 34577899999988 8999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||+++|+|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 90 e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~- 164 (345)
T 3a8x_A 90 EYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG- 164 (345)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT-
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC-
Confidence 9999999999997654 689999999999999999999999 99999999999999999999999999997643221
Q ss_pred ccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchh---hHHHHHHHHh-hcccccccccC
Q 002826 738 QSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESL---DVVKWVRRKI-NITNGAIQVLD 813 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~d 813 (876)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .......... .... .+
T Consensus 165 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~----~~- 238 (345)
T 3a8x_A 165 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----RI- 238 (345)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC----CC-
T ss_pred -CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC----CC-
Confidence 123345699999999999988899999999999999999999999975322110 0011111111 1110 01
Q ss_pred hhhhhhcHHHHHHHHHHHHHccCCCCCCCCCH
Q 002826 814 PKIANCYQQQMLGALEIALRCTSVMPEKRPSM 845 (876)
Q Consensus 814 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~ 845 (876)
+......+.+++.+||+.||++||++
T Consensus 239 ------p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 239 ------PRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ------CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ------CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11123457899999999999999996
No 151
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=341.46 Aligned_cols=249 Identities=16% Similarity=0.203 Sum_probs=188.6
Q ss_pred cccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCcc--CHHHHHHHHHHHhhccC--ccccceeeEEEeCCeEEEEEEc
Q 002826 584 DEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQ--SSKTLKTEVKTLAKIRH--KNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~ 659 (876)
|++.+..|.|+||.||+|...+++.||+|++...... ..+.+.+|++++++++| |||+++++++.+++..++|||
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e- 89 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 89 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-
Confidence 3344444445599999998889999999999754322 23678899999999986 999999999999999999999
Q ss_pred CCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccc
Q 002826 660 LQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQS 739 (876)
Q Consensus 660 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 739 (876)
+.+++|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++.........
T Consensus 90 ~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 164 (343)
T 3dbq_A 90 CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 164 (343)
T ss_dssp CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccccc
Confidence 56779999997754 789999999999999999999999 999999999999997 5789999999998776443333
Q ss_pred ccccccccccccCccccCC-----------CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccc
Q 002826 740 TMSSEYALSCYNAPEYGYS-----------KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGA 808 (876)
Q Consensus 740 ~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (876)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||................. ..
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~--~~--- 239 (343)
T 3dbq_A 165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN--HE--- 239 (343)
T ss_dssp -----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTT--SC---
T ss_pred cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCC--cc---
Confidence 3345569999999998753 6788999999999999999999999976433222111111100 00
Q ss_pred ccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 809 IQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 809 ~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
..... .....+.+++.+||+.||++|||+.|+++.
T Consensus 240 -----~~~~~---~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 240 -----IEFPD---IPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp -----CCCCC---CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----cCCcc---cCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 00001 112357899999999999999999999875
No 152
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.4e-39 Score=345.47 Aligned_cols=262 Identities=23% Similarity=0.284 Sum_probs=183.7
Q ss_pred ccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhh--ccCccccceeeEEEeCC----eEEEEEE
Q 002826 585 EKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAK--IRHKNIVKVLGFFHSDE----SIFLIYE 658 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~lv~e 658 (876)
....+|.|| ||.||+|+. +|+.||||++.. .....+.+|.+++.. ++||||+++++++.+.+ ..++|||
T Consensus 7 ~~~~lg~G~-~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 81 (303)
T 3gxj_A 7 LQESIGKGR-FGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp CCEEEEECS-SSEEEEC-C-TTSCEEEEECC----TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEE
T ss_pred ehhhccCCC-CeEEEEEEE-cCcceEEEEecc---cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEe
Confidence 334455555 999999987 589999999854 345667788888887 79999999999998876 7899999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhh--------ccCCCCccccccccCceeeCCCCCeEEccccchh
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLH--------KDYVPHLLHRNVKSKNILLDADFEPKLTDFALDR 730 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~ 730 (876)
|+++|+|.+++.+. .+++..+.+++.|++.|++||| +. +|+||||||+||+++.++.+||+|||+++
T Consensus 82 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 82 YHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp CCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred ccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 99999999999654 5788889999999999999999 77 99999999999999999999999999997
Q ss_pred hcccccccc--ccccccccccccCccccCCC------CCCCccchHHHHHHHHHHHhC----------CCCCCCCCcchh
Q 002826 731 IVGEAAFQS--TMSSEYALSCYNAPEYGYSK------KATAQMDAYSFGVVLLELITG----------RQAEQAEPAESL 792 (876)
Q Consensus 731 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~SlGv~l~elltg----------~~p~~~~~~~~~ 792 (876)
......... ......||+.|+|||.+.+. .++.++|||||||++|||++| +.||........
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc
Confidence 765433221 12334689999999998765 334689999999999999999 666654322211
Q ss_pred hHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 793 DVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
............ .....+.+... ..+....+.+++.+||+.||++|||+.|+++.|+++.++..
T Consensus 237 ~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 237 SVEEMRKVVCEQ--KLRPNIPNRWQ--SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp CCC-CHHHHTTS--CCCCCCCGGGG--SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred cHHHHHHHHHHh--hcCCCcccccc--chhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 111111111100 01111111111 12455678999999999999999999999999999987654
No 153
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.1e-37 Score=347.04 Aligned_cols=270 Identities=21% Similarity=0.276 Sum_probs=199.7
Q ss_pred ccccCCCCCCC-CceEEEEEEeC-CCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 583 MDEKSSAGNGG-PFGRVYILSLP-SGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 583 ~~~~~~~g~~g-~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
|.....+|.|+ +||+||+|+.. +|+.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..|+|||
T Consensus 27 y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 106 (389)
T 3gni_B 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 106 (389)
T ss_dssp EEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEE
Confidence 33344455550 59999999765 799999999975432 223567889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 659 FLQMGSLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 659 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
|+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+........
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~ 183 (389)
T 3gni_B 107 FMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ 183 (389)
T ss_dssp CCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred ccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence 99999999999765 35699999999999999999999999 999999999999999999999999998865432111
Q ss_pred -----ccccccccccccccCccccCC--CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcc-----
Q 002826 738 -----QSTMSSEYALSCYNAPEYGYS--KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINIT----- 805 (876)
Q Consensus 738 -----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----- 805 (876)
........||+.|+|||.+.+ ..++.++||||+||++|||++|+.||......... ...........
T Consensus 184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~ 262 (389)
T 3gni_B 184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML-LEKLNGTVPCLLDTST 262 (389)
T ss_dssp ECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH-HHC-------------
T ss_pred cccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHhcCCCCccccccc
Confidence 111223468899999999887 57899999999999999999999999875443321 11100000000
Q ss_pred ----------------ccccccc----------ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhcc
Q 002826 806 ----------------NGAIQVL----------DPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA--LHSLS 856 (876)
Q Consensus 806 ----------------~~~~~~~----------d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~--L~~i~ 856 (876)
......+ +.............+.+++.+||+.||++|||+.|+++. ++++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~ 341 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 341 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence 0000000 000001122234568899999999999999999999865 55544
No 154
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.4e-37 Score=339.04 Aligned_cols=263 Identities=24% Similarity=0.303 Sum_probs=205.3
Q ss_pred cccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhh--ccCccccceeeEEEeCC----eEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAK--IRHKNIVKVLGFFHSDE----SIFL 655 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~l 655 (876)
.|.....+|.|+ ||.||+|+. +|+.||||++.. .....+.+|++++.. ++||||+++++++...+ ..++
T Consensus 43 ~y~~~~~lg~G~-~g~Vy~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~l 117 (342)
T 1b6c_B 43 TIVLQESIGKGR-FGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 117 (342)
T ss_dssp HCEEEEEEEEET-TEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEE
T ss_pred cEEEEeeecCCC-CcEEEEEEE-cCccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEE
Confidence 444444555555 999999987 699999999864 345677889998887 68999999999998875 7999
Q ss_pred EEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhh--------ccCCCCccccccccCceeeCCCCCeEEcccc
Q 002826 656 IYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLH--------KDYVPHLLHRNVKSKNILLDADFEPKLTDFA 727 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfG 727 (876)
||||+++|+|.+++.+. .+++..+.+++.|++.|++||| +. +|+||||||+||+++.++++||+|||
T Consensus 118 v~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 192 (342)
T 1b6c_B 118 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLG 192 (342)
T ss_dssp EECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEEECC
Confidence 99999999999999764 5899999999999999999999 77 99999999999999999999999999
Q ss_pred chhhcccccccc--ccccccccccccCccccCCCC------CCCccchHHHHHHHHHHHhC----------CCCCCCCCc
Q 002826 728 LDRIVGEAAFQS--TMSSEYALSCYNAPEYGYSKK------ATAQMDAYSFGVVLLELITG----------RQAEQAEPA 789 (876)
Q Consensus 728 la~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~SlGv~l~elltg----------~~p~~~~~~ 789 (876)
+++......... ......||+.|+|||.+.+.. ++.++||||||+++|||+|| +.||.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~ 272 (342)
T 1b6c_B 193 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 272 (342)
T ss_dssp TCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCc
Confidence 998765432211 234456899999999987652 23689999999999999999 778876544
Q ss_pred chhhHHHHHHHHhhcccccccccChhhhh--hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 790 ESLDVVKWVRRKINITNGAIQVLDPKIAN--CYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
.......+....... ...+.+.. ...+....+.+++.+||+.||++|||+.|+++.|+++.++..
T Consensus 273 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 273 SDPSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp SSCCHHHHHHHHTTS------CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred CcccHHHHHHHHHHH------HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 333333333222111 11122221 122455678999999999999999999999999999987654
No 155
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-38 Score=349.17 Aligned_cols=257 Identities=25% Similarity=0.359 Sum_probs=192.3
Q ss_pred CCCCCCCCceEEEEEEeC--CC--cEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEe-CCeEEEEEEcC
Q 002826 587 SSAGNGGPFGRVYILSLP--SG--ELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHS-DESIFLIYEFL 660 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~--~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~ 660 (876)
..+|.| +||+||+|... ++ ..||+|.+..... ...+++.+|+.++++++||||+++++++.+ ++..++||||+
T Consensus 95 ~~LG~G-~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~ 173 (373)
T 3c1x_A 95 EVIGRG-HFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173 (373)
T ss_dssp EEEECC-SSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred cEeeeC-CCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECC
Confidence 345555 49999999753 22 4689998865322 334678999999999999999999998754 56789999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc--
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ-- 738 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-- 738 (876)
++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 174 ~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~ 250 (373)
T 3c1x_A 174 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 250 (373)
T ss_dssp TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred CCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccccccccc
Confidence 99999999987777789999999999999999999999 9999999999999999999999999999876533211
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
.......+|+.|+|||.+.+..++.++||||||+++|||+| |.+||........ ....... . ....|.
T Consensus 251 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~--~~~~~~~---~----~~~~p~-- 319 (373)
T 3c1x_A 251 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI--TVYLLQG---R----RLLQPE-- 319 (373)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH--HHHHHTT---C----CCCCCT--
T ss_pred cccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH--HHHHHcC---C----CCCCCC--
Confidence 12233457788999999988889999999999999999999 6777765443322 2221111 0 001111
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCccc
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLL 862 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~ 862 (876)
..+..+.+++.+||+.||++|||++|+++.|+++.......
T Consensus 320 ----~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 320 ----YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp ----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred ----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 12235789999999999999999999999999987655433
No 156
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.4e-37 Score=332.47 Aligned_cols=254 Identities=19% Similarity=0.236 Sum_probs=192.6
Q ss_pred CCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEEEcCCCCC
Q 002826 587 SSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIYEFLQMGS 664 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~gs 664 (876)
.+..|.|+||+||+|.. .+++.||||++..........+.+|++++.++ +||||+++++++.+++..|+||||+++++
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 34445555999999975 47999999999876656678899999999985 79999999999999999999999999999
Q ss_pred HHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCC---eEEccccchhhcccccc----
Q 002826 665 LGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFE---PKLTDFALDRIVGEAAF---- 737 (876)
Q Consensus 665 L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~---~kl~DfGla~~~~~~~~---- 737 (876)
|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.......
T Consensus 98 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 173 (316)
T 2ac3_A 98 ILSHIHKRR-HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPI 173 (316)
T ss_dssp HHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----------
T ss_pred HHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccc
Confidence 999997654 689999999999999999999999 9999999999999998765 99999999876542211
Q ss_pred -ccccccccccccccCccccCC-----CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchh---------h-HHHHHHHH
Q 002826 738 -QSTMSSEYALSCYNAPEYGYS-----KKATAQMDAYSFGVVLLELITGRQAEQAEPAESL---------D-VVKWVRRK 801 (876)
Q Consensus 738 -~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~---------~-~~~~~~~~ 801 (876)
........||+.|+|||.+.. ..++.++||||+||++|||++|+.||........ . ........
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i 253 (316)
T 2ac3_A 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESI 253 (316)
T ss_dssp --------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHH
T ss_pred cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHH
Confidence 111223458999999998764 4578899999999999999999999986543210 0 00111111
Q ss_pred hhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 802 INITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 802 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
... .....++. +......+.+++.+||+.||++|||+.|+++.
T Consensus 254 ~~~---~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 254 QEG---KYEFPDKD----WAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHC---CCCCCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hcc---CcccCchh----cccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111 00100010 11223467899999999999999999999884
No 157
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5.8e-38 Score=333.00 Aligned_cols=248 Identities=21% Similarity=0.266 Sum_probs=196.4
Q ss_pred ccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeC--CeEEEEEEcC
Q 002826 585 EKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSD--ESIFLIYEFL 660 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~ 660 (876)
....+|.|+ ||+||+|+. +++.||+|++..... ...+.+.+|+.++++++||||+++++++.+. +..++||||+
T Consensus 14 ~~~~lg~G~-~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 91 (271)
T 3kmu_A 14 FLTKLNENH-SGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWM 91 (271)
T ss_dssp EEEEEEEET-TEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECC
T ss_pred HHHHhcCCC-cceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeeccc
Confidence 334455555 999999988 589999999976432 2345788999999999999999999999886 7889999999
Q ss_pred CCCCHHHHhhccCC-cCCHHHHHHHHHHHHHHHHHhhccCCCC--ccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 661 QMGSLGDLICRQDF-QLQWSIRLKIAIGVAQGLAYLHKDYVPH--LLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 661 ~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
++|+|.+++.+... .+++..+..++.|++.|++|||+. + |+||||||+||+++.++.++++|||++.....
T Consensus 92 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~--- 165 (271)
T 3kmu_A 92 PYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS--- 165 (271)
T ss_dssp TTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC---
T ss_pred CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc---
Confidence 99999999987643 589999999999999999999998 7 99999999999999999999999887654322
Q ss_pred ccccccccccccccCccccCCCCCCC---ccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccCh
Q 002826 738 QSTMSSEYALSCYNAPEYGYSKKATA---QMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDP 814 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 814 (876)
....||+.|+|||.+.+..++. ++||||||+++|||++|+.||........ ........ .. +
T Consensus 166 ----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----~~~~~~~~--~~----~ 230 (271)
T 3kmu_A 166 ----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-----GMKVALEG--LR----P 230 (271)
T ss_dssp ----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-----HHHHHHSC--CC----C
T ss_pred ----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-----HHHHHhcC--CC----C
Confidence 2235789999999987654444 79999999999999999999976543321 11111000 11 1
Q ss_pred hhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 815 KIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 815 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
... ...+..+.+++.+||+.||++|||++|+++.|+++.++
T Consensus 231 ~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~~ 271 (271)
T 3kmu_A 231 TIP---PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271 (271)
T ss_dssp CCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC-
T ss_pred CCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 111 11234578999999999999999999999999998653
No 158
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=5.8e-38 Score=342.91 Aligned_cols=260 Identities=23% Similarity=0.325 Sum_probs=200.8
Q ss_pred cccCCCCCCCCceEEEEEEe------CCCcEEEEEEEecCC-ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEE
Q 002826 584 DEKSSAGNGGPFGRVYILSL------PSGELIAVKKLVNFG-CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 656 (876)
+.+.+..|.|+||.||+|.. .+++.||+|++.... .....++.+|+.++++++||||+++++++.+.+..|+|
T Consensus 32 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (327)
T 2yfx_A 32 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL 111 (327)
T ss_dssp CEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEE
Confidence 34444444455999999973 367899999986432 23345788999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHhhccC------CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC---CCCeEEcccc
Q 002826 657 YEFLQMGSLGDLICRQD------FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA---DFEPKLTDFA 727 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~---~~~~kl~DfG 727 (876)
|||+++++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++. +..+||+|||
T Consensus 112 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~Dfg 188 (327)
T 2yfx_A 112 MELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG 188 (327)
T ss_dssp EECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEECccc
Confidence 99999999999997653 4589999999999999999999999 9999999999999984 4569999999
Q ss_pred chhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhccc
Q 002826 728 LDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITN 806 (876)
Q Consensus 728 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 806 (876)
+++...............+++.|+|||.+.+..++.++||||||+++|||+| |+.||....... ....+.....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~~~~~--- 263 (327)
T 2yfx_A 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR--- 263 (327)
T ss_dssp HHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHHHTTCC---
T ss_pred cccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH--HHHHHhcCCC---
Confidence 9987654433333344557889999999888889999999999999999998 999997644322 2222211100
Q ss_pred ccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcc
Q 002826 807 GAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSL 861 (876)
Q Consensus 807 ~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~ 861 (876)
.... ......+.+++.+||+.||++|||+.|+++.|+.+......
T Consensus 264 ---~~~~-------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~~ 308 (327)
T 2yfx_A 264 ---MDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308 (327)
T ss_dssp ---CCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred ---CCCC-------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHHH
Confidence 0001 11234578999999999999999999999999998765443
No 159
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.8e-37 Score=338.24 Aligned_cols=247 Identities=21% Similarity=0.289 Sum_probs=178.2
Q ss_pred CCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhcc-CccccceeeEEEeCCeEEEEEEcCCCCCH
Q 002826 588 SAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIR-HKNIVKVLGFFHSDESIFLIYEFLQMGSL 665 (876)
Q Consensus 588 ~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL 665 (876)
.+|.|| ||+||+|... +++.||||++.. .....+.+|+.+++.++ ||||+++++++.+++..|+||||+++|+|
T Consensus 18 ~lG~G~-~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 18 PLGEGS-FSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CSEEET-TEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred ccccCC-CeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 455555 9999999764 799999999965 34567889999999997 99999999999999999999999999999
Q ss_pred HHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCC---CeEEccccchhhccccccccccc
Q 002826 666 GDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADF---EPKLTDFALDRIVGEAAFQSTMS 742 (876)
Q Consensus 666 ~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~---~~kl~DfGla~~~~~~~~~~~~~ 742 (876)
.+++.+. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++ .+||+|||+++....... ...
T Consensus 94 ~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~ 167 (325)
T 3kn6_A 94 FERIKKK-KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PLK 167 (325)
T ss_dssp HHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--ccc
Confidence 9999765 4799999999999999999999999 999999999999997665 899999999986653321 223
Q ss_pred cccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcch--hhHHHHHHHHhhcccccccccChhhhhhc
Q 002826 743 SEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAES--LDVVKWVRRKINITNGAIQVLDPKIANCY 820 (876)
Q Consensus 743 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 820 (876)
...||+.|+|||.+.+..++.++||||+|+++|||++|+.||....... ....+......... ..... ..+
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~---~~~~~----~~~ 240 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD---FSFEG----EAW 240 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC---CCCCS----HHH
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC---CCCCc----ccc
Confidence 4457999999999998899999999999999999999999998644321 11222222211111 11111 112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 821 QQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 821 ~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
......+.+++.+||+.||++|||++|+++.
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 2234568899999999999999999998753
No 160
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=330.40 Aligned_cols=247 Identities=19% Similarity=0.322 Sum_probs=179.9
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
+|.....+|.|+ ||.||+|.. .+|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 12 ~y~~~~~lg~G~-~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 12 DFKVGNLLGKGS-FAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceeeeeecCCC-ceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 444445555555 999999976 589999999996432 233467899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||+++++|.+++......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 99999999999987767899999999999999999999999 999999999999999999999999999987653221
Q ss_pred ccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 738 QSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
......||+.|+|||...+..++.++||||+|+++|||++|+.||........ ....... +....
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~--------~~~~~ 232 (278)
T 3cok_A 168 --KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----LNKVVLA--------DYEMP 232 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CCSS--------CCCCC
T ss_pred --cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----HHHHhhc--------ccCCc
Confidence 12234588999999999888899999999999999999999999986543321 0100000 00011
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
......+.+++.+||+.||++|||+.|+++
T Consensus 233 ---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 233 ---SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 112345789999999999999999999986
No 161
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6.3e-38 Score=340.87 Aligned_cols=258 Identities=24% Similarity=0.335 Sum_probs=203.6
Q ss_pred cccCCCCCCCCceEEEEEEe------CCCcEEEEEEEecCCc-cCHHHHHHHHHHHhhc-cCccccceeeEEEeCC-eEE
Q 002826 584 DEKSSAGNGGPFGRVYILSL------PSGELIAVKKLVNFGC-QSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDE-SIF 654 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~-~~~ 654 (876)
+.+.+..|.|+||+||+|.. .+++.||+|++..... ...+.+.+|+.+++++ +||||+++++++...+ ..+
T Consensus 29 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~ 108 (316)
T 2xir_A 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 108 (316)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCE
T ss_pred eeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceE
Confidence 33444444445999999963 3578999999975432 2235788999999999 7999999999988754 589
Q ss_pred EEEEcCCCCCHHHHhhccCCc---------------CCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCC
Q 002826 655 LIYEFLQMGSLGDLICRQDFQ---------------LQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADF 719 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~~~~---------------l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~ 719 (876)
+||||+++++|.+++...... +++..+..++.|++.|++|||+. +|+||||||+||+++.++
T Consensus 109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~ 185 (316)
T 2xir_A 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKN 185 (316)
T ss_dssp EEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCC
Confidence 999999999999999765432 88999999999999999999999 999999999999999999
Q ss_pred CeEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHH
Q 002826 720 EPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWV 798 (876)
Q Consensus 720 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~ 798 (876)
.+||+|||+++...............+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||........ .....
T Consensus 186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-~~~~~ 264 (316)
T 2xir_A 186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRL 264 (316)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH-HHHHH
T ss_pred CEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH-HHHHh
Confidence 999999999987654433333344557889999999988889999999999999999998 9999976544332 12221
Q ss_pred HHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 799 RRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 799 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
...... ... ......+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 265 ~~~~~~------~~~-------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 265 KEGTRM------RAP-------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp HHTCCC------CCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccCccC------CCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 111100 000 11223578999999999999999999999999998754
No 162
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=335.63 Aligned_cols=246 Identities=19% Similarity=0.306 Sum_probs=189.6
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc--------------------------cCHHHHHHHHHHHhhc
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC--------------------------QSSKTLKTEVKTLAKI 635 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~~l 635 (876)
|.....+|.| +||.||+|.. .+++.||+|++..... ...+.+.+|+++++++
T Consensus 15 y~~~~~lG~G-~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 93 (298)
T 2zv2_A 15 YTLKDEIGKG-SYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL 93 (298)
T ss_dssp EEEEEEEEC---CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred eEEEeEEeec-CCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence 3334445555 4999999965 4789999999865321 1135688999999999
Q ss_pred cCccccceeeEEEe--CCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCce
Q 002826 636 RHKNIVKVLGFFHS--DESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNI 713 (876)
Q Consensus 636 ~h~niv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NI 713 (876)
+||||+++++++.+ .+..++||||+++++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||
T Consensus 94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNL 168 (298)
T ss_dssp CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHE
Confidence 99999999999987 5689999999999999887643 4689999999999999999999999 999999999999
Q ss_pred eeCCCCCeEEccccchhhccccccccccccccccccccCccccCCCC---CCCccchHHHHHHHHHHHhCCCCCCCCCcc
Q 002826 714 LLDADFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKK---ATAQMDAYSFGVVLLELITGRQAEQAEPAE 790 (876)
Q Consensus 714 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~SlGv~l~elltg~~p~~~~~~~ 790 (876)
+++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||......
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 246 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred EECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence 999999999999999987654321 223456899999999987654 377899999999999999999999764332
Q ss_pred hhhHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 791 SLDVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
. ....+.. .. ... +.. ......+.+++.+||+.||++|||+.|+++
T Consensus 247 ~--~~~~~~~---~~---~~~--~~~----~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 247 C--LHSKIKS---QA---LEF--PDQ----PDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H--HHHHHHH---CC---CCC--CSS----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H--HHHHHhc---cc---CCC--CCc----cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1 1111111 10 000 000 112235789999999999999999999875
No 163
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.3e-37 Score=331.13 Aligned_cols=253 Identities=23% Similarity=0.306 Sum_probs=196.6
Q ss_pred hhhhhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCC-ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEE
Q 002826 577 HDLVIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFG-CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIF 654 (876)
Q Consensus 577 ~~l~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 654 (876)
+++...|.....+|.|| ||+||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 18 g~i~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 96 (285)
T 3is5_A 18 GTIDDLFIFKRKLGSGA-FGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMY 96 (285)
T ss_dssp SCHHHHEEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred CChhhheeecceeccCC-CeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEE
Confidence 45555666666666666 999999966 479999999997643 235678999999999999999999999999999999
Q ss_pred EEEEcCCCCCHHHHhhcc---CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceee---CCCCCeEEccccc
Q 002826 655 LIYEFLQMGSLGDLICRQ---DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILL---DADFEPKLTDFAL 728 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll---~~~~~~kl~DfGl 728 (876)
+||||+++++|.+++... +..+++..+..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~ 173 (285)
T 3is5_A 97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGL 173 (285)
T ss_dssp EEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred EEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence 999999999999988543 46799999999999999999999999 99999999999999 4568899999999
Q ss_pred hhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccc
Q 002826 729 DRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGA 808 (876)
Q Consensus 729 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (876)
++...... ......||+.|+|||.+. ..++.++||||+|+++|||++|+.||........ .......... .
T Consensus 174 a~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~--~~~~~~~~~~---~ 244 (285)
T 3is5_A 174 AELFKSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV--QQKATYKEPN---Y 244 (285)
T ss_dssp CCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHCCCC---C
T ss_pred ceecCCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH--HhhhccCCcc---c
Confidence 98765432 123445899999999875 4678999999999999999999999986543322 1111110000 0
Q ss_pred ccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 809 IQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 809 ~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
... .......+.+++.+||+.||++|||+.|+++
T Consensus 245 ----~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 245 ----AVE----CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----CC------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ----ccc----cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 0012345779999999999999999999986
No 164
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=339.26 Aligned_cols=261 Identities=21% Similarity=0.291 Sum_probs=201.1
Q ss_pred cccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEe----CCeEEEEEE
Q 002826 584 DEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHS----DESIFLIYE 658 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e 658 (876)
.....+|. |+||.||+|.. .+|+.||+|++........+.+.+|+++++.++||||+++++++.. ....++|||
T Consensus 32 ~~~~~lg~-G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 110 (317)
T 2buj_A 32 LFIQKLGE-GGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110 (317)
T ss_dssp EEEEEEEC---CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEE
T ss_pred EEEEEecC-CCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEE
Confidence 33344555 45999999976 5899999999876555556788999999999999999999999873 347899999
Q ss_pred cCCCCCHHHHhhc---cCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccc
Q 002826 659 FLQMGSLGDLICR---QDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEA 735 (876)
Q Consensus 659 ~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 735 (876)
|+++|+|.+++.+ .+..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++.....
T Consensus 111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp CCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred eCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 9999999999876 356799999999999999999999999 9999999999999999999999999988765321
Q ss_pred ccc-------cccccccccccccCccccCCCC---CCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcc
Q 002826 736 AFQ-------STMSSEYALSCYNAPEYGYSKK---ATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINIT 805 (876)
Q Consensus 736 ~~~-------~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 805 (876)
... .......||+.|+|||.+.... ++.++||||||+++|||++|+.||....................
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~- 266 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI- 266 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--C-
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCC-
Confidence 100 0112334789999999987543 68899999999999999999999864221111111111110000
Q ss_pred cccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcc
Q 002826 806 NGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSL 861 (876)
Q Consensus 806 ~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~ 861 (876)
+. .......+.+++.+||+.||.+|||+.|+++.|+.+.+..+.
T Consensus 267 --------~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 267 --------PQ----SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp --------CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred --------Cc----cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 00 011234688999999999999999999999999999765544
No 165
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=367.72 Aligned_cols=251 Identities=20% Similarity=0.299 Sum_probs=199.4
Q ss_pred CCCCCCCceEEEEEEeC---CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCC
Q 002826 588 SAGNGGPFGRVYILSLP---SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMG 663 (876)
Q Consensus 588 ~~g~~g~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 663 (876)
.+|.|+ ||.||+|.+. ++..||||++..... ...+++.+|++++++++|||||++++++.+ +..++||||+++|
T Consensus 343 ~LG~G~-fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGN-FGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECS-SSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCC-CcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 355555 9999999653 567899999976432 356789999999999999999999999976 5699999999999
Q ss_pred CHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc-ccccc
Q 002826 664 SLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF-QSTMS 742 (876)
Q Consensus 664 sL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~-~~~~~ 742 (876)
+|.+++......+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .....
T Consensus 421 ~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 497 (613)
T 2ozo_A 421 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497 (613)
T ss_dssp BHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred cHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeecc
Confidence 99999987777899999999999999999999999 999999999999999999999999999987753321 12222
Q ss_pred cccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcH
Q 002826 743 SEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQ 821 (876)
Q Consensus 743 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 821 (876)
...+++.|+|||++....++.++|||||||++|||++ |+.||....... ....+..... ... ..
T Consensus 498 ~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~~~~~------~~~-------p~ 562 (613)
T 2ozo_A 498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQGKR------MEC-------PP 562 (613)
T ss_dssp ----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HHHHHHTTCC------CCC-------CT
T ss_pred CCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCCC------CCC-------CC
Confidence 3345678999999988899999999999999999998 999998654332 2222221110 001 11
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 822 QQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 822 ~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
..+..+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 563 ~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 563 ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp TCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 2234688999999999999999999999999987543
No 166
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.1e-37 Score=335.95 Aligned_cols=255 Identities=25% Similarity=0.357 Sum_probs=197.8
Q ss_pred CCCCCCCCceEEEEEEeCC----CcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEE-eCCeEEEEEEcC
Q 002826 587 SSAGNGGPFGRVYILSLPS----GELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFH-SDESIFLIYEFL 660 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~ 660 (876)
..+|.|| ||+||+|...+ +..||+|.+..... ...+.+.+|+.++++++||||+++++++. .++..++||||+
T Consensus 31 ~~lg~G~-~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 109 (298)
T 3f66_A 31 EVIGRGH-FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109 (298)
T ss_dssp EEEEEET-TEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECC
T ss_pred ceeeecC-CceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCC
Confidence 4455555 99999997542 23689999865332 23467889999999999999999999865 456789999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc--c
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF--Q 738 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~--~ 738 (876)
++|+|.+++......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 110 ~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 186 (298)
T 3f66_A 110 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 186 (298)
T ss_dssp TTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccccchhcc
Confidence 99999999987777799999999999999999999999 999999999999999999999999999987654322 1
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
.......+|+.|+|||...+..++.++||||+|+++|||++ |.+||....... ........ . . ...+.
T Consensus 187 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--~~~~~~~~---~---~-~~~~~-- 255 (298)
T 3f66_A 187 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQG---R---R-LLQPE-- 255 (298)
T ss_dssp -----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--HHHHHHTT---C---C-CCCCT--
T ss_pred ccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHHhcC---C---C-CCCCc--
Confidence 22334457788999999988889999999999999999999 566665433322 11111111 0 0 00111
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
..+..+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 256 ----~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 256 ----YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp ----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred ----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 112357899999999999999999999999999876543
No 167
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=334.98 Aligned_cols=243 Identities=21% Similarity=0.228 Sum_probs=189.3
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCcc--CHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQ--SSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 657 (876)
+|.....+|.|| ||+||+|... +|+.||||++...... .......|+..+.++ +||||++++++|.+++..++||
T Consensus 58 ~y~~~~~LG~G~-~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 58 SFQRLSRLGHGS-YGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HEEEEEEEEEET-TEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred heeeeheeccCC-CeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 455555666666 9999999775 7999999998654322 223445566666655 8999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||+ +++|.+++...+..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 5699999887777899999999999999999999999 99999999999999999999999999988765432
Q ss_pred ccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 738 QSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... . +.. ... ....+...
T Consensus 212 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~---~~~-~~~------~~~~~~~~ 274 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----G---WQQ-LRQ------GYLPPEFT 274 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----H---HHH-HTT------TCCCHHHH
T ss_pred --CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----H---HHH-Hhc------cCCCcccc
Confidence 2233458999999998775 68999999999999999999977654311 1 110 000 11112221
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
......+.+++.+||+.||++|||+.|+++
T Consensus 275 ---~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 275 ---AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 123456889999999999999999999986
No 168
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2e-37 Score=347.50 Aligned_cols=256 Identities=19% Similarity=0.276 Sum_probs=193.7
Q ss_pred cchhhhhhcccccCC-CCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhc-cCccccceeeEEEe-
Q 002826 574 VTEHDLVIGMDEKSS-AGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHS- 649 (876)
Q Consensus 574 ~~~~~l~~~~~~~~~-~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~- 649 (876)
+...++..+|+...+ +|.|+ ||+||+|... +|+.||||++.. ...+.+|++++.++ +||||+++++++..
T Consensus 54 ~~~~~~~~~y~~~~~~LG~G~-~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~ 127 (400)
T 1nxk_A 54 IKKNAIIDDYKVTSQVLGLGI-NGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL 127 (400)
T ss_dssp CBCSCGGGTEEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred cCCCcccccceeccceeeecc-CeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeec
Confidence 344455556666544 55555 9999999664 799999999853 34677899887554 89999999999876
Q ss_pred ---CCeEEEEEEcCCCCCHHHHhhccC-CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC---CCCeE
Q 002826 650 ---DESIFLIYEFLQMGSLGDLICRQD-FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA---DFEPK 722 (876)
Q Consensus 650 ---~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~---~~~~k 722 (876)
.+..|+||||+++|+|.+++.+.+ ..+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+|
T Consensus 128 ~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~k 204 (400)
T 1nxk_A 128 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILK 204 (400)
T ss_dssp ETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEE
T ss_pred ccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEE
Confidence 567899999999999999997653 4699999999999999999999999 9999999999999997 78999
Q ss_pred EccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchh--hHHHHHHH
Q 002826 723 LTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESL--DVVKWVRR 800 (876)
Q Consensus 723 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~--~~~~~~~~ 800 (876)
|+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+..
T Consensus 205 l~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~ 281 (400)
T 1nxk_A 205 LTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 281 (400)
T ss_dssp ECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH
T ss_pred EEecccccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc
Confidence 99999998654322 23345689999999999988999999999999999999999999986543321 11111111
Q ss_pred HhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 801 KINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 801 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
. ......+.. ......+.+++.+||+.||++|||+.|+++.
T Consensus 282 ~------~~~~~~~~~----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 282 G------QYEFPNPEW----SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp T------CCCCCTTTT----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred C------cccCCCccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1 011111111 1223467899999999999999999999975
No 169
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.3e-37 Score=339.82 Aligned_cols=245 Identities=22% Similarity=0.288 Sum_probs=187.5
Q ss_pred ccccCCCCCCCCceEEEEEEe----CCCcEEEEEEEecCC----ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSL----PSGELIAVKKLVNFG----CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIF 654 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 654 (876)
|.....+|.|| ||.||+|+. .+|+.||+|++.... ......+.+|+++++.++||||+++++++.+++..|
T Consensus 19 y~~~~~lG~G~-~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 97 (327)
T 3a62_A 19 FELLRVLGKGG-YGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLY 97 (327)
T ss_dssp EEEEEEEEEET-TEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEE
T ss_pred eEEEEEEEeCC-CEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEE
Confidence 33444555555 999999976 479999999997542 123456788999999999999999999999999999
Q ss_pred EEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccc
Q 002826 655 LIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGE 734 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 734 (876)
+||||+++++|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 98 LILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 9999999999999997654 689999999999999999999999 999999999999999999999999999876543
Q ss_pred cccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccCh
Q 002826 735 AAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDP 814 (876)
Q Consensus 735 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 814 (876)
... ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||........ ...+. ..... +.+
T Consensus 174 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~---~~~~~----~p~ 242 (327)
T 3a62_A 174 DGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT--IDKIL---KCKLN----LPP 242 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHH---HTCCC----CCT
T ss_pred CCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH--HHHHH---hCCCC----CCC
Confidence 221 22344689999999999888899999999999999999999999986543221 11111 11100 111
Q ss_pred hhhhhcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002826 815 KIANCYQQQMLGALEIALRCTSVMPEKRP-----SMFEVVK 850 (876)
Q Consensus 815 ~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~ell~ 850 (876)
.....+.+++.+||+.||++|| ++.|+++
T Consensus 243 -------~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 243 -------YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -------TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -------CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1223578999999999999999 7778876
No 170
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4e-37 Score=333.65 Aligned_cols=260 Identities=21% Similarity=0.293 Sum_probs=194.8
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCcc---CHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQ---SSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
+|.....+|.|+ ||.||+|.. .+|+.||+|++...... ....+.+|+.++++++||||+++++++.+++..++||
T Consensus 33 ~y~~~~~lg~G~-~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 33 NFRIEKKIGRGQ-FSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GEEEEEEEECC---CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceEEEEeecCCC-CceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 343444455554 999999975 58999999999753322 3456889999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhc---cCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccc
Q 002826 658 EFLQMGSLGDLICR---QDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGE 734 (876)
Q Consensus 658 e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 734 (876)
||+++++|.+++.. ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999864 345689999999999999999999999 999999999999999999999999999987653
Q ss_pred cccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccCh
Q 002826 735 AAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDP 814 (876)
Q Consensus 735 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 814 (876)
... ......|++.|+|||...+..++.++||||||+++|||++|+.||.............+.. .. . ....
T Consensus 189 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~--~-~~~~- 259 (310)
T 2wqm_A 189 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ---CD--Y-PPLP- 259 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHT---TC--S-CCCC-
T ss_pred CCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhc---cc--C-CCCc-
Confidence 321 1223458899999999988889999999999999999999999997654433222222211 10 0 0000
Q ss_pred hhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 815 KIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 815 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
. ......+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 260 --~---~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 260 --S---DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp --T---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --c---cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 0 112335789999999999999999999999999987543
No 171
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-37 Score=354.68 Aligned_cols=247 Identities=24% Similarity=0.410 Sum_probs=199.5
Q ss_pred hcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEE
Q 002826 581 IGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 581 ~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 656 (876)
.+.|.+.+..|.|+||.||+|... +|+.||||++.... ......+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 344445555555559999999765 89999999996532 23456789999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccc
Q 002826 657 YEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 736 (876)
|||+++|+|.+++.+. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999999765 4699999999999999999999999 99999999999999999999999999998765432
Q ss_pred cccccccccccccccCccccCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChh
Q 002826 737 FQSTMSSEYALSCYNAPEYGYSKKA-TAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPK 815 (876)
Q Consensus 737 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 815 (876)
. .....||+.|+|||.+.+..+ +.++||||+||++|||++|+.||........ ........ .. .|
T Consensus 171 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-----~~~i~~~~---~~--~p- 236 (476)
T 2y94_A 171 F---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL-----FKKICDGI---FY--TP- 236 (476)
T ss_dssp C---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH-----HHHHHTTC---CC--CC-
T ss_pred c---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH-----HHHHhcCC---cC--CC-
Confidence 2 234468999999999887654 7899999999999999999999986543221 11111111 00 01
Q ss_pred hhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 816 IANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 816 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
......+.+++.+||+.||++|||+.|+++
T Consensus 237 -----~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 237 -----QYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp -----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -----ccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 111235789999999999999999999997
No 172
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.1e-37 Score=332.56 Aligned_cols=254 Identities=24% Similarity=0.391 Sum_probs=203.8
Q ss_pred ccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCC
Q 002826 583 MDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQM 662 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 662 (876)
|.....+|.|+ ||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++. ++..++||||+++
T Consensus 15 y~~~~~lg~G~-~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 91 (279)
T 1qpc_A 15 LKLVERLGAGQ-FGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMEN 91 (279)
T ss_dssp EEEEEEEEEET-TEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTT
T ss_pred hhheeeecCCC-CeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCC
Confidence 33445555555 999999998888899999986543 45678999999999999999999999986 4568999999999
Q ss_pred CCHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccccc
Q 002826 663 GSLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTM 741 (876)
Q Consensus 663 gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 741 (876)
++|.+++... +..+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 92 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~ 167 (279)
T 1qpc_A 92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAR 167 (279)
T ss_dssp CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-ECC
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccc-ccc
Confidence 9999999754 23689999999999999999999999 999999999999999999999999999987654322 122
Q ss_pred ccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhc
Q 002826 742 SSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCY 820 (876)
Q Consensus 742 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 820 (876)
....++..|+|||...+..++.++||||||+++|||++ |+.||....... ....+... ......
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~------~~~~~~------- 232 (279)
T 1qpc_A 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERG------YRMVRP------- 232 (279)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTT------CCCCCC-------
T ss_pred cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--HHHHHhcc------cCCCCc-------
Confidence 33446778999999888888999999999999999999 999997644322 12211111 000011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 821 QQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 821 ~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
......+.+++.+|++.||++|||+.++++.|+++...
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 11234678999999999999999999999999998654
No 173
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.9e-37 Score=331.04 Aligned_cols=262 Identities=21% Similarity=0.267 Sum_probs=195.7
Q ss_pred hcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccC---HHHHHHHHHHHhhccCccccceeeEEEeCCeEEEE
Q 002826 581 IGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQS---SKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 581 ~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 656 (876)
.+|.....+|.|+ ||.||+|... +++.||+|++....... .+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 34 ~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 34 GPYRLRRLVGRGG-MGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp CCEEEEEEEEECS-SSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEcCCC-CeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 3444445555555 9999999764 78999999986543322 36788999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccc
Q 002826 657 YEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 736 (876)
|||+++++|.+++.+.+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999997654 689999999999999999999999 99999999999999999999999999998765432
Q ss_pred cccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhh
Q 002826 737 FQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKI 816 (876)
Q Consensus 737 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 816 (876)
. .......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... .......... +..
T Consensus 189 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~-------~~~ 254 (309)
T 2h34_A 189 L-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS------VMGAHINQAI-------PRP 254 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH------HHHHHHHSCC-------CCG
T ss_pred c-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH------HHHHHhccCC-------CCc
Confidence 1 1223445899999999998888999999999999999999999999764322 1111111110 000
Q ss_pred hhhcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhcccCCcc
Q 002826 817 ANCYQQQMLGALEIALRCTSVMPEKRP-SMFEVVKALHSLSTRTSL 861 (876)
Q Consensus 817 ~~~~~~~~~~~~~li~~cl~~dP~~RP-s~~ell~~L~~i~~~~~~ 861 (876)
.......+..+.+++.+||+.||++|| |++++++.|+.+......
T Consensus 255 ~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~ 300 (309)
T 2h34_A 255 STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQ 300 (309)
T ss_dssp GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence 111122234578999999999999999 999999999998665543
No 174
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=341.75 Aligned_cols=248 Identities=12% Similarity=0.127 Sum_probs=199.7
Q ss_pred ccCCCCCCCCceEEEEE------EeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhcc---CccccceeeEEEeCCeEEE
Q 002826 585 EKSSAGNGGPFGRVYIL------SLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIR---HKNIVKVLGFFHSDESIFL 655 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~------~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~l 655 (876)
....+|.|| ||+||+| ...+++.||+|++.. ....++..|++++++++ |+||+++++++..++..|+
T Consensus 69 ~~~~lG~G~-~g~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~l 144 (365)
T 3e7e_A 69 VHHLLGEGA-FAQVYEATQGDLNDAKNKQKFVLKVQKP---ANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVL 144 (365)
T ss_dssp EEEEEEECS-SEEEEEEEC-------CCCCEEEEEESS---CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEE
T ss_pred EEEEeeccC-CEEEEEEEecCCcccccCcEEEEEEeCC---CChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEE
Confidence 334455555 9999999 345799999999864 35667888888888886 9999999999999999999
Q ss_pred EEEcCCCCCHHHHhhc----cCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC-----------CCC
Q 002826 656 IYEFLQMGSLGDLICR----QDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA-----------DFE 720 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~-----------~~~ 720 (876)
||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.
T Consensus 145 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~~~ 221 (365)
T 3e7e_A 145 VGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAG 221 (365)
T ss_dssp EECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------CTT
T ss_pred EEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccccCC
Confidence 9999999999999975 345799999999999999999999999 9999999999999998 899
Q ss_pred eEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHH
Q 002826 721 PKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRR 800 (876)
Q Consensus 721 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 800 (876)
+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 222 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-------- 293 (365)
T 3e7e_A 222 LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-------- 293 (365)
T ss_dssp EEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE--------
T ss_pred EEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce--------
Confidence 999999999766533333344556799999999999998899999999999999999999999864322111
Q ss_pred HhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHhhcccCC
Q 002826 801 KINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKR-PSMFEVVKALHSLSTRT 859 (876)
Q Consensus 801 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~R-Ps~~ell~~L~~i~~~~ 859 (876)
. . ...+...+ ....+.+++..|++.+|.+| |+++++.+.|+++.++.
T Consensus 294 --~----~----~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 294 --K----P----EGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp --E----E----CSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred --e----e----chhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 0 0 01111111 12356789999999999999 78999999999986654
No 175
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=5.5e-37 Score=342.86 Aligned_cols=249 Identities=17% Similarity=0.236 Sum_probs=190.4
Q ss_pred ccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhcc--CccccceeeEEEeCCeEEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIR--HKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e 658 (876)
|.....+|.|| ||.||+|...+++.||||++..... ...+.+.+|++++++++ ||||+++++++..++..|+|||
T Consensus 58 y~~~~~LG~G~-fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 58 YSILKQIGSGG-SSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEECCS-SEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEccCC-CeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 33344455555 9999999888899999999975432 23467889999999996 5999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
+.+++|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++........
T Consensus 137 -~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 137 -CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp -CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred -cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 56789999997754 789999999999999999999999 999999999999995 589999999999877544322
Q ss_pred cccccccccccccCccccCC-----------CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccc
Q 002826 739 STMSSEYALSCYNAPEYGYS-----------KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNG 807 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 807 (876)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... .......
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~----~~~~~~~-- 284 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL----HAIIDPN-- 284 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH----HHHHCTT--
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHH----HHHhCcc--
Confidence 23345569999999998754 368899999999999999999999997643322111 1111100
Q ss_pred cccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 808 AIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 808 ~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.. ...... ....+.+++.+||+.||++|||+.|+++.
T Consensus 285 ~~----~~~~~~---~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 285 HE----IEFPDI---PEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp SC----CCCCCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cc----CCCCcc---chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 00 000111 12357899999999999999999999864
No 176
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-37 Score=333.22 Aligned_cols=256 Identities=20% Similarity=0.313 Sum_probs=200.3
Q ss_pred CCCCCCCCceEEEEEEeC-C---CcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeE-EEEEEcC
Q 002826 587 SSAGNGGPFGRVYILSLP-S---GELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESI-FLIYEFL 660 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~lv~e~~ 660 (876)
..+|.|| ||+||+|... + +..||+|++..... ...+.+.+|+.++++++||||+++++++.+.+.. ++||||+
T Consensus 27 ~~lg~G~-~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 27 RVIGKGH-FGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEET-TEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred ceeccCC-CceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 4455555 9999999653 2 33799999865332 2346788999999999999999999999876554 9999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc--c
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF--Q 738 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~--~ 738 (876)
.+++|.+++......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 106 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (298)
T 3pls_A 106 CHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSV 182 (298)
T ss_dssp TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCS
T ss_pred cCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccccc
Confidence 99999999988777899999999999999999999999 999999999999999999999999999987654321 1
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
.......+++.|+|||...+..++.++||||+|+++|||++|..|+...... .............. .
T Consensus 183 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~------~------ 249 (298)
T 3pls_A 183 QQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLTHFLAQGRRLP------Q------ 249 (298)
T ss_dssp CCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHHHHHHTTCCCC------C------
T ss_pred ccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHHHHhhcCCCCC------C------
Confidence 2233445788999999999989999999999999999999965554432222 22222222111100 0
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
.......+.+++.+||+.||++|||++|+++.|+++.++..
T Consensus 250 -~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 250 -PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp -CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred -CccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 01122357899999999999999999999999999876543
No 177
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.9e-37 Score=337.64 Aligned_cols=259 Identities=22% Similarity=0.271 Sum_probs=197.9
Q ss_pred hhhhhhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecC-----CccCHHHHHHHHHHHhhccCccccceeeEEEe
Q 002826 576 EHDLVIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNF-----GCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHS 649 (876)
Q Consensus 576 ~~~l~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 649 (876)
..++...|.....+|.|+ ||+||+|.. .+++.||+|++... .....+.+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGS-YGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp HHHHHHHEEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhheeecceeeecC-CeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 345556666666677666 999999966 47899999998643 22345678999999999999999999999999
Q ss_pred CCeEEEEEEcCCCCCHHHHhhcc---------------------------------------CCcCCHHHHHHHHHHHHH
Q 002826 650 DESIFLIYEFLQMGSLGDLICRQ---------------------------------------DFQLQWSIRLKIAIGVAQ 690 (876)
Q Consensus 650 ~~~~~lv~e~~~~gsL~~~l~~~---------------------------------------~~~l~~~~~~~i~~~i~~ 690 (876)
.+..++||||+++|+|.+++... ...+++..+..++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998521 122467788899999999
Q ss_pred HHHHhhccCCCCccccccccCceeeCCCC--CeEEccccchhhccccc--cccccccccccccccCccccCC--CCCCCc
Q 002826 691 GLAYLHKDYVPHLLHRNVKSKNILLDADF--EPKLTDFALDRIVGEAA--FQSTMSSEYALSCYNAPEYGYS--KKATAQ 764 (876)
Q Consensus 691 ~l~~LH~~~~~~i~H~Dlkp~NIll~~~~--~~kl~DfGla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~--~~~~~~ 764 (876)
|++|||+. +|+||||||+||+++.++ .+||+|||+++...... .........||+.|+|||.+.+ ..++.+
T Consensus 180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 99999999 999999999999998766 89999999998764321 1112344568999999998864 678899
Q ss_pred cchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCC
Q 002826 765 MDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPS 844 (876)
Q Consensus 765 ~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs 844 (876)
+||||||+++|||++|+.||........ ...+.. . ......+... .....+.+++.+||+.||++|||
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~---~---~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDADT--ISQVLN---K---KLCFENPNYN----VLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH---C---CCCTTSGGGG----GSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHHH--HHHHHh---c---ccccCCcccc----cCCHHHHHHHHHHcCCChhHCCC
Confidence 9999999999999999999976543321 111111 1 1111111111 12346789999999999999999
Q ss_pred HHHHHH
Q 002826 845 MFEVVK 850 (876)
Q Consensus 845 ~~ell~ 850 (876)
+.|+++
T Consensus 325 ~~~~l~ 330 (345)
T 3hko_A 325 AMRALQ 330 (345)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999987
No 178
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3e-38 Score=346.12 Aligned_cols=260 Identities=24% Similarity=0.359 Sum_probs=205.4
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CC-----cEEEEEEEecCCc-cCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SG-----ELIAVKKLVNFGC-QSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIF 654 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 654 (876)
|.....+|.|| ||.||+|... ++ ..||+|++..... ...+.+.+|+++++++ +||||+++++++.+.+..+
T Consensus 48 ~~~~~~lG~G~-~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 126 (333)
T 2i1m_A 48 LQFGKTLGAGA-FGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126 (333)
T ss_dssp EEEEEEEEECS-SEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred ceeeeEeccCC-CcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceE
Confidence 33334455555 9999999764 23 4899999975432 2346788999999999 8999999999999999999
Q ss_pred EEEEcCCCCCHHHHhhcc-------------CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCe
Q 002826 655 LIYEFLQMGSLGDLICRQ-------------DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEP 721 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~ 721 (876)
+||||+++|+|.+++.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 127 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~ 203 (333)
T 2i1m_A 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVA 203 (333)
T ss_dssp EEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEE
T ss_pred EEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeE
Confidence 999999999999998653 23579999999999999999999999 99999999999999999999
Q ss_pred EEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHH
Q 002826 722 KLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRR 800 (876)
Q Consensus 722 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 800 (876)
||+|||+++...............+|+.|+|||...+..++.++||||||+++|||+| |..||........ .......
T Consensus 204 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~~~~~~ 282 (333)
T 2i1m_A 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FYKLVKD 282 (333)
T ss_dssp EBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-HHHHHHH
T ss_pred EECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-HHHHHhc
Confidence 9999999987654433333344557888999999888889999999999999999999 9999976543322 2222222
Q ss_pred HhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 801 KINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 801 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
.... ..+. ..+..+.+++.+||+.||++|||+.|+++.|+++..+..
T Consensus 283 ~~~~-------~~~~------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 329 (333)
T 2i1m_A 283 GYQM-------AQPA------FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 329 (333)
T ss_dssp TCCC-------CCCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred CCCC-------CCCC------CCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence 1110 0011 112457899999999999999999999999999876543
No 179
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.5e-37 Score=344.91 Aligned_cols=251 Identities=21% Similarity=0.258 Sum_probs=198.3
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecC---CccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNF---GCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
+|.....+|.|| ||+||+|+.. +++.||+|++.+. .......+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 70 ~y~~~~~LG~G~-fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 148 (410)
T 3v8s_A 70 DYEVVKVIGRGA-FGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 148 (410)
T ss_dssp GEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEcCC-CEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 344445555555 9999999765 6899999999652 1233456889999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||++||+|.+++.+. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 149 E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 149 EYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp CCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred eCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 999999999999754 589999999999999999999999 999999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccCCCC----CCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccC
Q 002826 738 QSTMSSEYALSCYNAPEYGYSKK----ATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLD 813 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 813 (876)
.......||+.|+|||++.... ++.++|||||||++|||++|+.||........ ............ -
T Consensus 224 -~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~-~~~i~~~~~~~~-------~ 294 (410)
T 3v8s_A 224 -VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-YSKIMNHKNSLT-------F 294 (410)
T ss_dssp -EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTHHHHCC-------C
T ss_pred -ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH-HHHHHhcccccc-------C
Confidence 1233456999999999987654 78899999999999999999999986543322 111111111111 0
Q ss_pred hhhhhhcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002826 814 PKIANCYQQQMLGALEIALRCTSVMPEK--RPSMFEVVKA 851 (876)
Q Consensus 814 ~~~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~ell~~ 851 (876)
|.. ......+.+++.+|+..+|.+ ||+++|+++.
T Consensus 295 p~~----~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 295 PDD----NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CTT----CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred CCc----ccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 100 012345789999999999988 9999999975
No 180
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.7e-37 Score=341.38 Aligned_cols=247 Identities=20% Similarity=0.263 Sum_probs=197.3
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecC---CccCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNF---GCQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 656 (876)
+|.....+|.|+ ||.||+|+.. +|+.||+|++... .....+.+..|..+++.+ +||+|+++++++.+.+..|+|
T Consensus 21 ~y~~~~~lG~G~-fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 99 (353)
T 2i0e_A 21 DFNFLMVLGKGS-FGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99 (353)
T ss_dssp TEEEEEEEEEET-TEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred HcEEEEEEeeCC-CEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence 344445555555 9999999775 5889999999753 224456788999999988 799999999999999999999
Q ss_pred EEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccc
Q 002826 657 YEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 736 (876)
|||++||+|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 99999999999997654 689999999999999999999999 99999999999999999999999999997643221
Q ss_pred cccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhh
Q 002826 737 FQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKI 816 (876)
Q Consensus 737 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 816 (876)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||....... . .+......... .
T Consensus 176 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~--~---~~~i~~~~~~~----p--- 241 (353)
T 2i0e_A 176 --VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--L---FQSIMEHNVAY----P--- 241 (353)
T ss_dssp --CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H---HHHHHHCCCCC----C---
T ss_pred --cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH--H---HHHHHhCCCCC----C---
Confidence 12334569999999999998889999999999999999999999998654322 1 11111111000 0
Q ss_pred hhhcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 002826 817 ANCYQQQMLGALEIALRCTSVMPEKRPS-----MFEVVKA 851 (876)
Q Consensus 817 ~~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~ell~~ 851 (876)
......+.+++.+||+.||++||+ ++|+++.
T Consensus 242 ----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 242 ----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ----TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 112346789999999999999995 5677653
No 181
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=347.21 Aligned_cols=263 Identities=24% Similarity=0.332 Sum_probs=203.6
Q ss_pred cccCCCCCCCCceEEEEEEe-----CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCC--eEEEE
Q 002826 584 DEKSSAGNGGPFGRVYILSL-----PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDE--SIFLI 656 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv 656 (876)
+++.+..+.|+||.||+|+. .+|+.||+|++........+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 122 (326)
T 2w1i_A 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 122 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence 33344444455999999973 478999999997655455678999999999999999999999987644 78999
Q ss_pred EEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccc
Q 002826 657 YEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 736 (876)
|||+++++|.+++......+++..+.+++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 123 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~ 199 (326)
T 2w1i_A 123 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199 (326)
T ss_dssp ECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred EECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence 999999999999988766799999999999999999999999 99999999999999999999999999998775432
Q ss_pred cc-cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchh----------hHHHHHHHHhhcc
Q 002826 737 FQ-STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESL----------DVVKWVRRKINIT 805 (876)
Q Consensus 737 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~----------~~~~~~~~~~~~~ 805 (876)
.. .......++..|+|||...+..++.++||||||+++|||+||+.||.....+.. .............
T Consensus 200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (326)
T 2w1i_A 200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279 (326)
T ss_dssp SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcC
Confidence 21 122334467789999998888889999999999999999999998864321110 0000000100000
Q ss_pred cccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 806 NGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 806 ~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
.. +. .....+..+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 280 --~~----~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 280 --GR----LP---RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp --CC----CC---CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CC----CC---CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 00 00 0112234688999999999999999999999999998653
No 182
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.3e-37 Score=351.02 Aligned_cols=258 Identities=20% Similarity=0.264 Sum_probs=190.3
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecC--CccCHHHHHHHHHHHhhccCccccceeeEEEeC------Ce
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNF--GCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSD------ES 652 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 652 (876)
.|.....+|.|+ ||+||+|.. .+|+.||||++... .....+++.+|+.+++.++||||+++++++... ..
T Consensus 63 ~y~~~~~lG~G~-~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 63 RYQNLKPIGSGA-QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TEEEEEEEEECS-SCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CeEEEEEeecCC-CeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 444445555555 999999965 47999999999754 223346788999999999999999999999654 46
Q ss_pred EEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhc
Q 002826 653 IFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIV 732 (876)
Q Consensus 653 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~ 732 (876)
.|+||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 142 ~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 142 VYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred EEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 8999999987 56666643 489999999999999999999999 9999999999999999999999999999876
Q ss_pred cccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccc---
Q 002826 733 GEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAI--- 809 (876)
Q Consensus 733 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 809 (876)
.... ......||+.|+|||++.+..++.++||||+||++|||++|++||.+....+. ....++..........
T Consensus 215 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~-~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 215 GTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp --CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCSCCHHHHTTS
T ss_pred CCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHHc
Confidence 5432 23445689999999999999999999999999999999999999987543221 1111111000000000
Q ss_pred --------------------cccChh----hhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 810 --------------------QVLDPK----IANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 810 --------------------~~~d~~----~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
..+... ...........+.+++.+||+.||++|||+.|+++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 001112235678999999999999999999999874
No 183
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1e-37 Score=333.28 Aligned_cols=251 Identities=23% Similarity=0.334 Sum_probs=197.1
Q ss_pred cCCCCCCCCceEEEEEEeCC----CcEEEEEEEecCC-ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 586 KSSAGNGGPFGRVYILSLPS----GELIAVKKLVNFG-CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
...+|.|+ ||+||+|.... +..||+|++.... ....+.+.+|+.+++.++||||+++++++.+ +..++||||+
T Consensus 17 ~~~lg~G~-~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 17 NRILGEGF-FGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEECS-SSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEecC-CeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecC
Confidence 34455555 99999996532 3469999987542 2335678899999999999999999999865 4568999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQST 740 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 740 (876)
++++|.+++.+....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++........ .
T Consensus 95 ~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~ 170 (281)
T 3cc6_A 95 PYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-K 170 (281)
T ss_dssp TTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--------
T ss_pred CCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccccccc-c
Confidence 99999999987777799999999999999999999999 9999999999999999999999999999876543221 2
Q ss_pred cccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhh
Q 002826 741 MSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANC 819 (876)
Q Consensus 741 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 819 (876)
.....+++.|+|||...+..++.++||||||+++|||++ |+.||....... ............ . +
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~~~~~~~~------~-~----- 236 (281)
T 3cc6_A 171 ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVLEKGDRLP------K-P----- 236 (281)
T ss_dssp --CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHHHHTCCCC------C-C-----
T ss_pred cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHHhcCCCCC------C-C-----
Confidence 233446788999999888889999999999999999998 999997644433 222222211100 0 0
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 002826 820 YQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLST 857 (876)
Q Consensus 820 ~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~ 857 (876)
......+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 237 -~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 237 -DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 1122357899999999999999999999999998754
No 184
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=362.87 Aligned_cols=253 Identities=25% Similarity=0.394 Sum_probs=204.8
Q ss_pred CCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCCCHH
Q 002826 587 SSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMGSLG 666 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 666 (876)
..+|.|+ ||.||+|.+.++..||||++.... ...+.+.+|++++++++||||+++++++.+ +..|+||||+++|+|.
T Consensus 273 ~~lG~G~-fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 273 VKLGQGC-FGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEECS-SEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred eecccCC-CeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 4455555 999999999888899999997543 456789999999999999999999999876 6789999999999999
Q ss_pred HHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccccccccc
Q 002826 667 DLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSSEY 745 (876)
Q Consensus 667 ~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 745 (876)
+++... +..+++..+.+++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .......
T Consensus 350 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~ 425 (535)
T 2h8h_A 350 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAK 425 (535)
T ss_dssp HHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH-HTTCSTT
T ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce-ecccCCc
Confidence 999754 34689999999999999999999999 999999999999999999999999999987654321 1222334
Q ss_pred ccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHHHH
Q 002826 746 ALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQM 824 (876)
Q Consensus 746 gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 824 (876)
++..|+|||.+....++.++|||||||++|||++ |+.||....... ....+..... .... ....
T Consensus 426 ~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~------~~~~-------~~~~ 490 (535)
T 2h8h_A 426 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGYR------MPCP-------PECP 490 (535)
T ss_dssp SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--HHHHHHTTCC------CCCC-------TTCC
T ss_pred CcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC------CCCC-------CCCC
Confidence 6788999999888889999999999999999999 999997643322 2222221110 0011 1223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcc
Q 002826 825 LGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSL 861 (876)
Q Consensus 825 ~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~ 861 (876)
..+.+++.+||+.||++|||+.++++.|+++......
T Consensus 491 ~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~ 527 (535)
T 2h8h_A 491 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527 (535)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence 4678999999999999999999999999998765443
No 185
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.3e-37 Score=331.28 Aligned_cols=260 Identities=22% Similarity=0.364 Sum_probs=194.0
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCcc--CHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEc
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQ--SSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 659 (876)
|.....+|.|| ||+||+|... +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (311)
T 4agu_A 5 YEKIGKIGEGS-YGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY 83 (311)
T ss_dssp EEEEEEEEECS-SEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ceEeeEEeecC-CeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence 34445566555 9999999765 6999999998654322 135678899999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccc
Q 002826 660 LQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQS 739 (876)
Q Consensus 660 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 739 (876)
+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 157 (311)
T 4agu_A 84 CDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD-- 157 (311)
T ss_dssp CSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred CCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc--
Confidence 9999999887654 4689999999999999999999999 999999999999999999999999999987653321
Q ss_pred ccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhc-c------------
Q 002826 740 TMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINI-T------------ 805 (876)
Q Consensus 740 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~------------ 805 (876)
......||+.|+|||.+.+ ..++.++||||+|+++|||++|+.||........ ...+...... .
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ--LYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhcccccccccccccccc
Confidence 2234458999999998865 5689999999999999999999999987544322 1111111100 0
Q ss_pred cccccccCh----hhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 806 NGAIQVLDP----KIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 806 ~~~~~~~d~----~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.......++ ............+.+++.+||+.||++|||++|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000 0011112234568899999999999999999999874
No 186
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7.9e-37 Score=338.70 Aligned_cols=267 Identities=26% Similarity=0.276 Sum_probs=201.8
Q ss_pred cccchhhhhhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhcc-----Cccccceee
Q 002826 572 LRVTEHDLVIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIR-----HKNIVKVLG 645 (876)
Q Consensus 572 ~~~~~~~l~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~~~~ 645 (876)
..+..+++..+.|.+.+..|.|+||+||+|+. .+++.||||++... ......+..|+++++.++ ||||+++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 34455555555555555445555999999976 57899999998642 234456788999999996 999999999
Q ss_pred EEEeCCeEEEEEEcCCCCCHHHHhhccC-CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC-------
Q 002826 646 FFHSDESIFLIYEFLQMGSLGDLICRQD-FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA------- 717 (876)
Q Consensus 646 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~------- 717 (876)
++...+..++||||+ +++|.+++.+.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 104 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~ 179 (360)
T 3llt_A 104 KFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSL 179 (360)
T ss_dssp EEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEE
T ss_pred eeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccc
Confidence 999999999999999 889999997653 4589999999999999999999999 9999999999999975
Q ss_pred ------------------CCCeEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh
Q 002826 718 ------------------DFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT 779 (876)
Q Consensus 718 ------------------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt 779 (876)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 254 (360)
T 3llt_A 180 ITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254 (360)
T ss_dssp EEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred cchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHH
Confidence 789999999999765432 223458999999999999999999999999999999999
Q ss_pred CCCCCCCCCcchhhHHHHHHHHhh-cccc---------cccccC--------hhh--------------hhhcHHHHHHH
Q 002826 780 GRQAEQAEPAESLDVVKWVRRKIN-ITNG---------AIQVLD--------PKI--------------ANCYQQQMLGA 827 (876)
Q Consensus 780 g~~p~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~d--------~~~--------------~~~~~~~~~~~ 827 (876)
|+.||....... ....+..... .... ....++ |.. ......+...+
T Consensus 255 g~~pf~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (360)
T 3llt_A 255 GSLLFRTHEHME--HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELF 332 (360)
T ss_dssp SSCSCCCSSHHH--HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHH
T ss_pred CCCCCCCCcHHH--HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHH
Confidence 999998654322 1222211110 0000 000000 000 00000112567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002826 828 LEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 828 ~~li~~cl~~dP~~RPs~~ell~ 850 (876)
.+++.+||+.||++|||+.|+++
T Consensus 333 ~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 333 CDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHhcCChhhCCCHHHHhc
Confidence 89999999999999999999975
No 187
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3e-37 Score=339.41 Aligned_cols=247 Identities=28% Similarity=0.368 Sum_probs=196.8
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccC---HHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQS---SKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
.|.....+|.|+ ||+||+|+. .+|+.||||++....... ...+.+|++++++++||||+++++++.+++..++||
T Consensus 55 ~y~~~~~lG~G~-~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 55 LFSDLREIGHGS-FGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred heeeeeEEccCC-CEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 344555666666 999999975 589999999997543222 246789999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||++ |++.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9998 589888876666899999999999999999999999 9999999999999999999999999999765432
Q ss_pred ccccccccccccccCccccC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccCh
Q 002826 738 QSTMSSEYALSCYNAPEYGY---SKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDP 814 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 814 (876)
....||+.|+|||.+. ...++.++|||||||++|||++|+.||........ ........ .....+
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~-----~~~~~~~~---~~~~~~ 275 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----LYHIAQNE---SPALQS 275 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----HHHHHHSC---CCCCCC
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-----HHHHHhcC---CCCCCC
Confidence 2345899999999873 56789999999999999999999999976433221 11111111 000100
Q ss_pred hhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002826 815 KIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALH 853 (876)
Q Consensus 815 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~ 853 (876)
. .....+.+++.+||+.||++|||+.|+++.-.
T Consensus 276 ---~---~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 276 ---G---HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp ---T---TSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred ---C---CCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 0 11235789999999999999999999987543
No 188
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=338.17 Aligned_cols=245 Identities=21% Similarity=0.292 Sum_probs=198.5
Q ss_pred hhhhhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCcc--------CHHHHHHHHHHHhhccCccccceeeEE
Q 002826 577 HDLVIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQ--------SSKTLKTEVKTLAKIRHKNIVKVLGFF 647 (876)
Q Consensus 577 ~~l~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~ 647 (876)
+++...|.....+|.|+ ||+||+|.. .+++.||||++...... ....+.+|++++++++||||+++++++
T Consensus 20 ~~~~~~y~~~~~lG~G~-~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~ 98 (335)
T 3dls_A 20 GEYSQKYSTMSPLGSGA-FGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF 98 (335)
T ss_dssp THHHHHEEEEEECSSSS-SCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE
T ss_pred cccccceEEEeEEEecC-CEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 34444566666666666 999999965 57999999999764321 234677899999999999999999999
Q ss_pred EeCCeEEEEEEcCCCC-CHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccc
Q 002826 648 HSDESIFLIYEFLQMG-SLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDF 726 (876)
Q Consensus 648 ~~~~~~~lv~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~Df 726 (876)
.+.+..++||||+.+| +|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 99 ~~~~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 99 ENQGFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp ECSSEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999999776 9999997654 699999999999999999999999 9999999999999999999999999
Q ss_pred cchhhccccccccccccccccccccCccccCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcc
Q 002826 727 ALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKA-TAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINIT 805 (876)
Q Consensus 727 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 805 (876)
|+++....... .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||........ .
T Consensus 175 g~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-----------~- 239 (335)
T 3dls_A 175 GSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVE-----------A- 239 (335)
T ss_dssp TTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTT-----------T-
T ss_pred ccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHh-----------h-
Confidence 99987654332 223458999999999887765 7899999999999999999999965221100 0
Q ss_pred cccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 806 NGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 806 ~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
...+ .......+.+++.+||+.||++|||+.|+++.
T Consensus 240 -----~~~~-----~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 240 -----AIHP-----PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -----CCCC-----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -----ccCC-----CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 00122357899999999999999999999985
No 189
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.1e-37 Score=344.53 Aligned_cols=253 Identities=18% Similarity=0.224 Sum_probs=198.1
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
+|.....+|.|+ ||+||+|+.+ +|+.||+|++.+.. ......+.+|+.++..++||||+++++++.+.+..|+||
T Consensus 62 ~f~~~~~lG~G~-fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVm 140 (412)
T 2vd5_A 62 DFEILKVIGRGA-FSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM 140 (412)
T ss_dssp GEEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred hEEEEEEEeeCC-CeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 444445555555 9999999774 79999999996532 122345788999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||+++|+|.+++.+.+..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 141 E~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 141 EYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp CCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred cCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 99999999999987666899999999999999999999999 999999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccC-------CCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccc
Q 002826 738 QSTMSSEYALSCYNAPEYGY-------SKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQ 810 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (876)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||........ ............
T Consensus 218 -~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-~~~i~~~~~~~~----- 290 (412)
T 2vd5_A 218 -VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET-YGKIVHYKEHLS----- 290 (412)
T ss_dssp -EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTHHHHCC-----
T ss_pred -cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH-HHHHHhcccCcC-----
Confidence 1223346999999999876 35689999999999999999999999987543321 111111110000
Q ss_pred ccChhhhhhcHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 002826 811 VLDPKIANCYQQQMLGALEIALRCTSVMPEKR---PSMFEVVKA 851 (876)
Q Consensus 811 ~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~R---Ps~~ell~~ 851 (876)
-|.. ....+..+.+++.+|+. +|++| |+++|+++.
T Consensus 291 --~p~~---~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 291 --LPLV---DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp --CC-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred --CCcc---ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0110 11123467899999999 99998 689998764
No 190
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.9e-37 Score=332.92 Aligned_cols=250 Identities=21% Similarity=0.300 Sum_probs=196.6
Q ss_pred CCCCCCCceEEEEEEe---CCCcEEEEEEEecCCccC--HHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCC
Q 002826 588 SAGNGGPFGRVYILSL---PSGELIAVKKLVNFGCQS--SKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQM 662 (876)
Q Consensus 588 ~~g~~g~~g~Vy~~~~---~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 662 (876)
.+|.|| ||+||+|.. .+++.||||++....... .+++.+|+++++.++||||+++++++ +.+..++||||+++
T Consensus 24 ~lg~G~-~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~ 101 (291)
T 1xbb_A 24 ELGSGN-FGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAEL 101 (291)
T ss_dssp EEEECS-SEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred cccccc-CeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCC
Confidence 455555 999999943 357899999997543222 46788999999999999999999999 66788999999999
Q ss_pred CCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc-ccc
Q 002826 663 GSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ-STM 741 (876)
Q Consensus 663 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~ 741 (876)
++|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 102 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 177 (291)
T 1xbb_A 102 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 177 (291)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC-
T ss_pred CCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCccccc
Confidence 99999997653 689999999999999999999999 9999999999999999999999999999876543221 222
Q ss_pred ccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhc
Q 002826 742 SSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCY 820 (876)
Q Consensus 742 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 820 (876)
....+++.|+|||...+..++.++||||||+++|||++ |+.||....... ....+... ..... .
T Consensus 178 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~------~~~~~-------~ 242 (291)
T 1xbb_A 178 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKG------ERMGC-------P 242 (291)
T ss_dssp ---CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTT------CCCCC-------C
T ss_pred ccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHHcC------CCCCC-------C
Confidence 33346788999999888888999999999999999999 999998654322 22222111 00001 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 821 QQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 821 ~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
...+..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 243 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 243 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 12234688999999999999999999999999998643
No 191
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3e-37 Score=329.19 Aligned_cols=242 Identities=24% Similarity=0.392 Sum_probs=193.8
Q ss_pred ccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 585 EKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
....+|.|| ||+||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 13 ~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (279)
T 3fdn_A 13 IGRPLGKGK-FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYA 91 (279)
T ss_dssp EEEEEEECS-SEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EeeEEecCC-CeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecC
Confidence 344555555 9999999654 68899999986432 234567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQST 740 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 740 (876)
++++|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~---- 163 (279)
T 3fdn_A 92 PLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---- 163 (279)
T ss_dssp TTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--------
T ss_pred CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCccc----
Confidence 9999999997654 689999999999999999999999 99999999999999999999999999986554322
Q ss_pred cccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhc
Q 002826 741 MSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCY 820 (876)
Q Consensus 741 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 820 (876)
.....|++.|+|||.+.+..++.++||||+|+++|||++|+.||........ ...... ..... .
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~---~~~~~--------~--- 227 (279)
T 3fdn_A 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--YKRISR---VEFTF--------P--- 227 (279)
T ss_dssp ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHHH---TCCCC--------C---
T ss_pred ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH--HHHHHh---CCCCC--------C---
Confidence 2334589999999999988899999999999999999999999986543321 111111 11000 0
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 821 QQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 821 ~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
......+.+++.+||+.||++|||++|+++.
T Consensus 228 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 228 DFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1122357799999999999999999999975
No 192
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.7e-36 Score=327.63 Aligned_cols=252 Identities=21% Similarity=0.322 Sum_probs=198.6
Q ss_pred hhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 579 LVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 579 l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
+...|.....+|.|+ ||.||+|+.. +|+.||+|++..........+.+|+++++.++||||+++++++.+.+..++||
T Consensus 7 ~~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 7 IRKTFIFMEVLGSGA-FSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHHHEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhccceeeeeccCCC-CceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 333454455555555 9999999764 79999999998655445567899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceee---CCCCCeEEccccchhhccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILL---DADFEPKLTDFALDRIVGE 734 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll---~~~~~~kl~DfGla~~~~~ 734 (876)
||+++++|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 86 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 86 QLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred EcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 9999999999987654 689999999999999999999999 99999999999999 7789999999999876543
Q ss_pred cccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccCh
Q 002826 735 AAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDP 814 (876)
Q Consensus 735 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 814 (876)
.. .....||+.|+|||...+..++.++||||+|+++|||++|+.||....... ....+.. .. .....+
T Consensus 162 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~i~~---~~---~~~~~~ 229 (304)
T 2jam_A 162 GI----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK--LFEKIKE---GY---YEFESP 229 (304)
T ss_dssp BT----THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHH---CC---CCCCTT
T ss_pred Cc----cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHc---CC---CCCCcc
Confidence 21 223358899999999998889999999999999999999999997644322 1221111 11 111111
Q ss_pred hhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 815 KIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 815 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
. ....+..+.+++.+|++.||++|||+.|+++.
T Consensus 230 ~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 230 F----WDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp T----TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred c----cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 11223467899999999999999999999873
No 193
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.2e-37 Score=332.23 Aligned_cols=249 Identities=24% Similarity=0.412 Sum_probs=193.5
Q ss_pred ccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeC-CeEEEEEEcCC
Q 002826 583 MDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSD-ESIFLIYEFLQ 661 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~~ 661 (876)
|.....+|.|| ||+||+|+. +|+.||+|++... ...+.+.+|++++++++||||+++++++.+. +..++||||++
T Consensus 23 y~~~~~lg~G~-~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 98 (278)
T 1byg_A 23 LKLLQTIGKGE-FGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 98 (278)
T ss_dssp EEEEEEEEECS-SCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred ceEEeEEecCC-CceEEEEEE-cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence 33445555555 999999987 5899999998653 3567789999999999999999999997654 57899999999
Q ss_pred CCCHHHHhhccC-CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccc
Q 002826 662 MGSLGDLICRQD-FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQST 740 (876)
Q Consensus 662 ~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 740 (876)
+++|.+++.+.+ ..+++..+.+++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 99 ~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---- 171 (278)
T 1byg_A 99 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---- 171 (278)
T ss_dssp TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc----
Confidence 999999997653 2388999999999999999999999 99999999999999999999999999987654322
Q ss_pred cccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhh
Q 002826 741 MSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANC 819 (876)
Q Consensus 741 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 819 (876)
....+++.|+|||...+..++.++||||+|+++|||++ |+.||........ ...+.. . .....
T Consensus 172 -~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~--~~~~~~---~---~~~~~------- 235 (278)
T 1byg_A 172 -DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPRVEK---G---YKMDA------- 235 (278)
T ss_dssp -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH--HHHHTT---T---CCCCC-------
T ss_pred -cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHhc---C---CCCCC-------
Confidence 12246788999999988889999999999999999998 9999987554332 111111 0 00001
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 820 YQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 820 ~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
....+..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 236 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 236 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 112234678999999999999999999999999998653
No 194
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.8e-36 Score=324.08 Aligned_cols=250 Identities=22% Similarity=0.278 Sum_probs=198.7
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
+|.....+|.|+ ||.||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 7 ~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 7 NYDVKEELGKGA-FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhcCcC-CeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 444445555555 9999999664 799999999965432 223567899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCC---eEEccccchhhcccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFE---PKLTDFALDRIVGEA 735 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~---~kl~DfGla~~~~~~ 735 (876)
|+++++|.+.+.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||.+......
T Consensus 86 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 86 LVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred cCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 999999999887653 689999999999999999999999 9999999999999986655 999999999776543
Q ss_pred ccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChh
Q 002826 736 AFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPK 815 (876)
Q Consensus 736 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 815 (876)
.. .....||+.|+|||.+.+..++.++||||+|+++|+|++|+.||....... ........ ......+.
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~------~~~~~~~~ 230 (284)
T 3kk8_A 162 EA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYAQIKAG------AYDYPSPE 230 (284)
T ss_dssp CB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHT------CCCCCTTT
T ss_pred cc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH--HHHHHHhc------cccCCchh
Confidence 22 234458999999999998889999999999999999999999997644322 11111111 11111111
Q ss_pred hhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 816 IANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 816 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
. ......+.+++.+|++.||++|||+.|+++.
T Consensus 231 ~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 231 W----DTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp T----TTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred h----cccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1 1123457899999999999999999999884
No 195
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=3.9e-37 Score=336.35 Aligned_cols=254 Identities=22% Similarity=0.338 Sum_probs=198.0
Q ss_pred cCCCCCCCCceEEEEEEeC-CCcEE--EEEEEecCC-ccCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEEEcC
Q 002826 586 KSSAGNGGPFGRVYILSLP-SGELI--AVKKLVNFG-CQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~~-~~~~v--avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
...+|. |+||.||+|+.. +|+.+ |+|++.... ....+.+.+|+++++++ +||||+++++++.+.+..++||||+
T Consensus 30 ~~~lg~-G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 108 (327)
T 1fvr_A 30 QDVIGE-GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 108 (327)
T ss_dssp EEEEEC-GGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred eeeeec-CCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecC
Confidence 344554 459999999664 56654 999886532 23456789999999999 8999999999999999999999999
Q ss_pred CCCCHHHHhhccC---------------CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEcc
Q 002826 661 QMGSLGDLICRQD---------------FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTD 725 (876)
Q Consensus 661 ~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~D 725 (876)
++++|.+++.+.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kL~D 185 (327)
T 1fvr_A 109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 185 (327)
T ss_dssp TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECC
T ss_pred CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeEEEcc
Confidence 9999999997643 4689999999999999999999999 999999999999999999999999
Q ss_pred ccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhc
Q 002826 726 FALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINI 804 (876)
Q Consensus 726 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 804 (876)
||+++...... ......+++.|+|||...+..++.++||||+|+++|||++ |+.||....... ........
T Consensus 186 fg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-----~~~~~~~~ 257 (327)
T 1fvr_A 186 FGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----LYEKLPQG 257 (327)
T ss_dssp TTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHGGGT
T ss_pred cCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH-----HHHHhhcC
Confidence 99987543221 1223346788999999888888999999999999999998 999997654322 11111111
Q ss_pred ccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcc
Q 002826 805 TNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSL 861 (876)
Q Consensus 805 ~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~ 861 (876)
..... .......+.+++.+||+.||++|||+.|+++.|+++.++...
T Consensus 258 ---~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 304 (327)
T 1fvr_A 258 ---YRLEK-------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304 (327)
T ss_dssp ---CCCCC-------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred ---CCCCC-------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcC
Confidence 00000 111234678999999999999999999999999998765443
No 196
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.6e-37 Score=354.08 Aligned_cols=245 Identities=22% Similarity=0.255 Sum_probs=188.9
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecC---CccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNF---GCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
|.....+|.|| ||.||+|.. .+|+.||+|++... .......+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus 150 y~~~~~lG~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 228 (446)
T 4ejn_A 150 FEYLKLLGKGT-FGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME 228 (446)
T ss_dssp EEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEEC
T ss_pred cEEeEEEeeCc-CEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEe
Confidence 44445555555 999999965 47999999999753 22334567789999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhc-cCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHK-DYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
|+++|+|.+++.+.+ .+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++......
T Consensus 229 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 303 (446)
T 4ejn_A 229 YANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG- 303 (446)
T ss_dssp CCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred eCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCC-
Confidence 999999999997654 78999999999999999999998 7 99999999999999999999999999998643322
Q ss_pred ccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 738 QSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.. ..... .
T Consensus 304 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~i~~---~~~~~----p---- 369 (446)
T 4ejn_A 304 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL--FELILM---EEIRF----P---- 369 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH---CCCCC----C----
T ss_pred -cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH--HHHHHh---CCCCC----C----
Confidence 123445699999999999888999999999999999999999999976543321 111111 11000 0
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRP-----SMFEVVK 850 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~ell~ 850 (876)
......+.+++.+||+.||++|| +++|+++
T Consensus 370 ---~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 370 ---RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ---TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11224578999999999999999 9999986
No 197
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=337.62 Aligned_cols=258 Identities=22% Similarity=0.322 Sum_probs=192.1
Q ss_pred cccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCcc-CHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCC
Q 002826 584 DEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQ-SSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQ 661 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 661 (876)
.....+|.|+ ||+||+|... +++.||+|++...... ....+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 5 ~~~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (324)
T 3mtl_A 5 IKLDKLGEGT-YATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD 83 (324)
T ss_dssp EEEEEEEECS-SEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred EEEEEEcCCC-CEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence 3344555555 9999999765 7999999998653321 12245579999999999999999999999999999999998
Q ss_pred CCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccccc
Q 002826 662 MGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTM 741 (876)
Q Consensus 662 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 741 (876)
+ +|.+++...+..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~ 157 (324)
T 3mtl_A 84 K-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--KTY 157 (324)
T ss_dssp E-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc--ccc
Confidence 5 99999988777899999999999999999999999 99999999999999999999999999997654322 123
Q ss_pred ccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcc--cccccccC-----
Q 002826 742 SSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINIT--NGAIQVLD----- 813 (876)
Q Consensus 742 ~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d----- 813 (876)
....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||....... ....+.+..... ........
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE--QLHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChHhchhhhcchhhc
Confidence 34458999999998876 568999999999999999999999998754432 222222221110 00000000
Q ss_pred ---------hhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 814 ---------PKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 814 ---------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
.............+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0001111223456789999999999999999999987
No 198
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.4e-37 Score=342.59 Aligned_cols=248 Identities=23% Similarity=0.257 Sum_probs=188.3
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc---cCHHHHHHHHHH-HhhccCccccceeeEEEeCCeEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC---QSSKTLKTEVKT-LAKIRHKNIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv 656 (876)
+|.....+|.|+ ||.||+|+.+ +++.||+|++.+... .....+.+|..+ ++.++||||+++++++.+.+..|+|
T Consensus 39 ~y~~~~~lG~G~-fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 39 DFHFLKVIGKGS-FGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GEEEEEEEECCT-TCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred heEEEEEEeeCC-CeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 344445555555 9999999765 689999999976432 223456667776 5778999999999999999999999
Q ss_pred EEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccc
Q 002826 657 YEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 736 (876)
|||++||+|.+++.+.+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 118 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 118 LDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 99999999999997654 688999999999999999999999 99999999999999999999999999998643222
Q ss_pred cccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhh
Q 002826 737 FQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKI 816 (876)
Q Consensus 737 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 816 (876)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .+........ +.+
T Consensus 194 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-----~~~i~~~~~~----~~~-- 260 (373)
T 2r5t_A 194 --STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM-----YDNILNKPLQ----LKP-- 260 (373)
T ss_dssp --CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHH-----HHHHHHSCCC----CCS--
T ss_pred --CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH-----HHHHHhcccC----CCC--
Confidence 123445699999999999998999999999999999999999999976443221 1111111100 111
Q ss_pred hhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002826 817 ANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKAL 852 (876)
Q Consensus 817 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L 852 (876)
.....+.+++.+||+.||++||++.+.++.+
T Consensus 261 -----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 261 -----NITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp -----SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred -----CCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 1223578999999999999999986444433
No 199
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.4e-37 Score=365.85 Aligned_cols=248 Identities=21% Similarity=0.321 Sum_probs=196.1
Q ss_pred CCCCCCCceEEEEEEe---CCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCC
Q 002826 588 SAGNGGPFGRVYILSL---PSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQM 662 (876)
Q Consensus 588 ~~g~~g~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 662 (876)
.+|.|| ||+||+|.+ ..++.||||++..... ...+++.+|++++++++|||||++++++.+ +..++||||+++
T Consensus 376 ~LG~G~-fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 376 ELGSGN-FGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEECS-SEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred EeccCC-CEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 456655 999999954 3568999999975432 235789999999999999999999999964 568999999999
Q ss_pred CCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc-cccc
Q 002826 663 GSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF-QSTM 741 (876)
Q Consensus 663 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~-~~~~ 741 (876)
|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....
T Consensus 454 g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999999764 4689999999999999999999999 999999999999999999999999999988754322 2223
Q ss_pred ccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhc
Q 002826 742 SSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCY 820 (876)
Q Consensus 742 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 820 (876)
....+|+.|+|||++....++.++|||||||++|||++ |+.||....... ....+...... . ..
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~~~~~~------~-------~p 594 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGERM------G-------CP 594 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCCC------C-------CC
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCC------C-------CC
Confidence 33446788999999988899999999999999999998 999997654432 22222211100 0 01
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 002826 821 QQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLS 856 (876)
Q Consensus 821 ~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~ 856 (876)
...+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 595 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 595 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 122346889999999999999999999999999864
No 200
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.5e-37 Score=343.43 Aligned_cols=261 Identities=25% Similarity=0.365 Sum_probs=187.3
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCC--ccCHHHHHHHHHHHhhcc-CccccceeeEEEeCC--eEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFG--CQSSKTLKTEVKTLAKIR-HKNIVKVLGFFHSDE--SIFL 655 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~--~~~l 655 (876)
.|.....+|.|+ ||.||+|.. .+|+.||||++.... ......+.+|+.+++.+. ||||+++++++...+ ..|+
T Consensus 10 ~y~~~~~lG~G~-~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l 88 (388)
T 3oz6_A 10 KYELVKKLGKGA-YGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88 (388)
T ss_dssp TEEEEEC--------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred ceEEEEEeeeCC-CeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence 444445555555 999999965 579999999986432 223456778999999997 999999999997644 7899
Q ss_pred EEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccc
Q 002826 656 IYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEA 735 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 735 (876)
||||+++ +|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 89 v~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 162 (388)
T 3oz6_A 89 VFDYMET-DLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162 (388)
T ss_dssp EEECCSE-EHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSSC
T ss_pred EecccCc-CHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccccc
Confidence 9999985 899998763 689999999999999999999999 9999999999999999999999999999865321
Q ss_pred c-------------------cccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHH
Q 002826 736 A-------------------FQSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVV 795 (876)
Q Consensus 736 ~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~ 795 (876)
. .........||+.|+|||++.+ ..++.++||||+||++|||++|++||.+...... .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--~ 240 (388)
T 3oz6_A 163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ--L 240 (388)
T ss_dssp CCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--H
T ss_pred ccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH--H
Confidence 1 0112334569999999999876 6789999999999999999999999987543221 1
Q ss_pred HHHHHHhhcccc--c----------------------ccccC---hhhhhh------cHHHHHHHHHHHHHccCCCCCCC
Q 002826 796 KWVRRKINITNG--A----------------------IQVLD---PKIANC------YQQQMLGALEIALRCTSVMPEKR 842 (876)
Q Consensus 796 ~~~~~~~~~~~~--~----------------------~~~~d---~~~~~~------~~~~~~~~~~li~~cl~~dP~~R 842 (876)
..+......+.. . ..... +.+... .......+.+++.+||+.||++|
T Consensus 241 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R 320 (388)
T 3oz6_A 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320 (388)
T ss_dssp HHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence 111111110000 0 00000 000000 00123468899999999999999
Q ss_pred CCHHHHHHH
Q 002826 843 PSMFEVVKA 851 (876)
Q Consensus 843 Ps~~ell~~ 851 (876)
||+.|+++.
T Consensus 321 ~t~~e~l~H 329 (388)
T 3oz6_A 321 ISANDALKH 329 (388)
T ss_dssp CCHHHHTTS
T ss_pred CCHHHHhCC
Confidence 999999986
No 201
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.3e-36 Score=346.99 Aligned_cols=261 Identities=19% Similarity=0.213 Sum_probs=203.4
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccC-ccccceeeEEEeCCeEEEEEEc
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRH-KNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~ 659 (876)
.|.....+|.| +||.||+|.. .+++.||||++.... ...++.+|+++++.++| +++..+..++.+.+..++||||
T Consensus 8 ~y~i~~~LG~G-~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 8 KFRLGRKIGSG-SFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TEECCCCCEEC-SSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cEEEEEEEeeC-CCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 34444445554 5999999975 579999999886543 33457889999999987 5566666667778899999999
Q ss_pred CCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceee---CCCCCeEEccccchhhccccc
Q 002826 660 LQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILL---DADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 660 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll---~~~~~~kl~DfGla~~~~~~~ 736 (876)
+ +++|.+++......+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 85 ~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (483)
T 3sv0_A 85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160 (483)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred C-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence 9 8899999987667899999999999999999999999 99999999999999 578999999999998776432
Q ss_pred cc-----cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchh-hHHHHH-HHHhhcccccc
Q 002826 737 FQ-----STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESL-DVVKWV-RRKINITNGAI 809 (876)
Q Consensus 737 ~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~-~~~~~~-~~~~~~~~~~~ 809 (876)
.. .......||..|+|||.+.+..++.++|||||||++|||++|+.||........ .....+ .....
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~------ 234 (483)
T 3sv0_A 161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA------ 234 (483)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH------
T ss_pred cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc------
Confidence 21 112355689999999999999999999999999999999999999987544321 111111 11110
Q ss_pred cccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 810 QVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 810 ~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
............++.+++.+||+.+|++||++.+|++.|+++..+.
T Consensus 235 ----~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 235 ----TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp ----SCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ----ccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 0111111222456889999999999999999999999999986543
No 202
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=8.2e-37 Score=344.85 Aligned_cols=254 Identities=22% Similarity=0.341 Sum_probs=189.5
Q ss_pred hhhhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc--------cCHHHHHHHHHHHhhccCccccceeeEEE
Q 002826 578 DLVIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC--------QSSKTLKTEVKTLAKIRHKNIVKVLGFFH 648 (876)
Q Consensus 578 ~l~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 648 (876)
.+...|.....+|.|| ||+||+|.. .+++.||+|++..... .....+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~-~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGA-CGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHTTEEEEEEEEECS-SSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhccEEEEeEEeeCC-CeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 3444555555566665 999999965 4789999999965321 12235789999999999999999999985
Q ss_pred eCCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCC---CCeEEcc
Q 002826 649 SDESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDAD---FEPKLTD 725 (876)
Q Consensus 649 ~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~---~~~kl~D 725 (876)
.+..|+||||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.+ +.+||+|
T Consensus 211 -~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 211 -AEDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp -SSEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred -cCceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 456899999999999999887654 689999999999999999999999 99999999999999754 4599999
Q ss_pred ccchhhccccccccccccccccccccCccccCC---CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHh
Q 002826 726 FALDRIVGEAAFQSTMSSEYALSCYNAPEYGYS---KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKI 802 (876)
Q Consensus 726 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 802 (876)
||+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ........
T Consensus 286 FG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~i~~~- 360 (419)
T 3i6u_A 286 FGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQITSG- 360 (419)
T ss_dssp SSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-HHHHHHTT-
T ss_pred cccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-HHHHHhcC-
Confidence 99998775432 2234568999999999753 5678899999999999999999999976443322 11211110
Q ss_pred hcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 803 NITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 803 ~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.... .+ ..+......+.+++.+||+.||++|||+.|+++.
T Consensus 361 -----~~~~-~~---~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 361 -----KYNF-IP---EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp -----CCCC-CH---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -----CCCC-Cc---hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 0010 11 1112234568899999999999999999999874
No 203
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.4e-36 Score=324.69 Aligned_cols=255 Identities=20% Similarity=0.299 Sum_probs=199.8
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc------cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC------QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIF 654 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 654 (876)
.|.....+|.|+ ||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 6 ~y~~~~~lg~G~-~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 6 HYEMGEELGSGQ-FAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhHHhhcccC-ceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 344445555555 9999999775 799999999975432 23578999999999999999999999999999999
Q ss_pred EEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCC----CeEEccccchh
Q 002826 655 LIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADF----EPKLTDFALDR 730 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~----~~kl~DfGla~ 730 (876)
+||||+++++|.+++.+.. .+++..+..++.|++.|++|||+. +|+||||||+||+++.++ .+||+|||.++
T Consensus 85 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999997643 689999999999999999999999 999999999999998876 89999999998
Q ss_pred hccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccc
Q 002826 731 IVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQ 810 (876)
Q Consensus 731 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (876)
....... .....|++.|+|||......++.++||||||+++|||++|+.||........ .. ...... .
T Consensus 161 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~---~~~~~~----~ 228 (283)
T 3bhy_A 161 KIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET--LT---NISAVN----Y 228 (283)
T ss_dssp ECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HH---HHHTTC----C
T ss_pred eccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH--HH---HhHhcc----c
Confidence 7654321 2334589999999999888899999999999999999999999976543221 11 111110 0
Q ss_pred ccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhcc
Q 002826 811 VLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK--ALHSLS 856 (876)
Q Consensus 811 ~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~--~L~~i~ 856 (876)
..++.. .......+.+++.+||+.||++|||+.|+++ .++.+.
T Consensus 229 ~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 229 DFDEEY---FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp CCCHHH---HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred CCcchh---cccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 011111 1122346789999999999999999999997 355543
No 204
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.9e-36 Score=346.59 Aligned_cols=256 Identities=23% Similarity=0.328 Sum_probs=203.2
Q ss_pred chhhhhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecC--CccCHHHHHHHHHHHhhccCccccceeeEEEeCC
Q 002826 575 TEHDLVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNF--GCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDE 651 (876)
Q Consensus 575 ~~~~l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 651 (876)
..+++...|.....+|.|+ ||+||+|... +++.||||++... .......+.+|++++++++||||+++++++.+.+
T Consensus 16 ~~g~~~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 94 (486)
T 3mwu_A 16 FQGTFAERYNIVCMLGKGS-FGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS 94 (486)
T ss_dssp TCCHHHHHEEEEEEEECCS-SSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred ccCChhcceEEeEEEeecC-CEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC
Confidence 3455666666666666665 9999999764 7999999999643 2245678899999999999999999999999999
Q ss_pred eEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeC---CCCCeEEccccc
Q 002826 652 SIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLD---ADFEPKLTDFAL 728 (876)
Q Consensus 652 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~---~~~~~kl~DfGl 728 (876)
..|+||||+++|+|.+.+.... .+++..+..++.|++.|++|||+. +|+||||||+||+++ .++.+||+|||+
T Consensus 95 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 170 (486)
T 3mwu_A 95 SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (486)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSC
T ss_pred EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCc
Confidence 9999999999999999887654 689999999999999999999999 999999999999995 456899999999
Q ss_pred hhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccc
Q 002826 729 DRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGA 808 (876)
Q Consensus 729 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (876)
++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|++||....... ....+... .
T Consensus 171 a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~~------~ 238 (486)
T 3mwu_A 171 STCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--ILKRVETG------K 238 (486)
T ss_dssp TTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHT------C
T ss_pred CeECCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhC------C
Confidence 98765432 2334468999999999875 58999999999999999999999998654322 22222111 0
Q ss_pred ccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 809 IQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 809 ~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.....+.. ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 239 ~~~~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 239 YAFDLPQW----RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CCSCSGGG----GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCCCCccc----CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 01111111 1223457899999999999999999999985
No 205
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.8e-36 Score=331.16 Aligned_cols=265 Identities=22% Similarity=0.342 Sum_probs=200.1
Q ss_pred hhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEe-------
Q 002826 580 VIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHS------- 649 (876)
Q Consensus 580 ~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------- 649 (876)
...|.....+|.|| ||+||+|+. .+|+.||+|++..... .....+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGT-FGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCS-TTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCC-CcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 33455555666665 999999976 5899999999865432 234578899999999999999999999987
Q ss_pred -CCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccc
Q 002826 650 -DESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFAL 728 (876)
Q Consensus 650 -~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGl 728 (876)
.+..++||||+++ ++.+.+......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 4568999999986 88888877666799999999999999999999999 999999999999999999999999999
Q ss_pred hhhccccc--cccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHh-hc
Q 002826 729 DRIVGEAA--FQSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKI-NI 804 (876)
Q Consensus 729 a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~-~~ 804 (876)
++.+.... .........||+.|+|||.+.+ ..++.++||||+||++|||++|++||....... ....+.... ..
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~i~~~~~~~ 248 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH--QLALISQLCGSI 248 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCCC
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCC
Confidence 98765221 1223345568999999998875 457999999999999999999999998754332 122222211 11
Q ss_pred ccccccccC---------------hhhhhhcH--HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 805 TNGAIQVLD---------------PKIANCYQ--QQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 805 ~~~~~~~~d---------------~~~~~~~~--~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
........+ +....... .....+.+++.+|++.||++|||+.|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 111111000 00000000 013457899999999999999999999984
No 206
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.4e-36 Score=350.35 Aligned_cols=250 Identities=22% Similarity=0.269 Sum_probs=200.3
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecC---CccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNF---GCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
|.....+|.|| ||.||+|+.. +|+.||+|++... .......+.+|+++++.++||||+++++++.+.+..|+|||
T Consensus 186 f~~~~~LG~G~-fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE 264 (576)
T 2acx_A 186 FRQYRVLGKGG-FGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 264 (576)
T ss_dssp EEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEeeCC-CEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEE
Confidence 33445555555 9999999764 7999999999653 22445678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccC-CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 659 FLQMGSLGDLICRQD-FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
|++||+|.+++...+ ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 265 y~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 265 LMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp CCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred cCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 999999999987653 3599999999999999999999999 999999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 738 QSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||........ .....+.........
T Consensus 342 ---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~~~i~~~i~~~~~~~--------- 408 (576)
T 2acx_A 342 ---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLVKEVPEEY--------- 408 (576)
T ss_dssp ---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-HHHHHHHHHHCCCCC---------
T ss_pred ---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-HHHHHHHhhcccccC---------
Confidence 2334699999999999988899999999999999999999999987543221 111111111111101
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRP-----SMFEVVKA 851 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~ell~~ 851 (876)
.......+.+++.+||+.||++|| ++.|+++.
T Consensus 409 --p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 409 --SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred --CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 111234678999999999999999 78888764
No 207
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=338.47 Aligned_cols=269 Identities=20% Similarity=0.243 Sum_probs=193.8
Q ss_pred ccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHH--HhhccCccccceeeEEEe-----CCeEEEEE
Q 002826 585 EKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKT--LAKIRHKNIVKVLGFFHS-----DESIFLIY 657 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~-----~~~~~lv~ 657 (876)
....+|.|| ||.||+|+. +++.||||++... ....+..|.++ ++.++||||+++++++.. ....++||
T Consensus 17 ~~~~lg~G~-~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~ 91 (336)
T 3g2f_A 17 LLELIGRGR-YGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM 91 (336)
T ss_dssp EEEEEEECS-SEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred eeeecccCC-CeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEE
Confidence 344455555 999999977 7899999999653 23344444444 556899999999986643 23678999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccC------CCCccccccccCceeeCCCCCeEEccccchhh
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDY------VPHLLHRNVKSKNILLDADFEPKLTDFALDRI 731 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~ 731 (876)
||+++|+|.+++.... .++..+.+++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||+++.
T Consensus 92 e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~ 169 (336)
T 3g2f_A 92 EYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169 (336)
T ss_dssp CCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceee
Confidence 9999999999997654 589999999999999999999873 23899999999999999999999999999987
Q ss_pred cccccc------ccccccccccccccCccccCC-------CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchh------
Q 002826 732 VGEAAF------QSTMSSEYALSCYNAPEYGYS-------KKATAQMDAYSFGVVLLELITGRQAEQAEPAESL------ 792 (876)
Q Consensus 732 ~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~------ 792 (876)
+..... ........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~ 249 (336)
T 3g2f_A 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQ 249 (336)
T ss_dssp CSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTH
T ss_pred cccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhh
Confidence 653221 122234468999999999876 3456789999999999999999777654322111
Q ss_pred -------hHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcccc
Q 002826 793 -------DVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLLS 863 (876)
Q Consensus 793 -------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~~ 863 (876)
....+ ...... ......+.+. .......+..+.+++.+||+.||++|||++|+++.|+++...+..-.
T Consensus 250 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~ 324 (336)
T 3g2f_A 250 TEVGNHPTFEDM-QVLVSR-EKQRPKFPEA-WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNK 324 (336)
T ss_dssp HHHCSSCCHHHH-HHHHTT-SCCCCCCCTT-CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC--
T ss_pred cccCCCchHHHH-Hhhhcc-cccCCCCCcc-cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcc
Confidence 00000 000000 0011111111 11122355678999999999999999999999999999987766553
No 208
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=7.1e-37 Score=335.44 Aligned_cols=251 Identities=19% Similarity=0.275 Sum_probs=195.3
Q ss_pred hhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEE
Q 002826 580 VIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 580 ~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 657 (876)
..+|.....+|.|+ ||.||+|..+ +|+.||+|++..... ...+|++++.++ +||||+++++++.+++..|+||
T Consensus 21 ~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 21 TDGYEVKEDIGVGS-YSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEEeeCC-CEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 33455555566655 9999999764 799999999976432 235688888888 7999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCC----CCeEEccccchhhcc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDAD----FEPKLTDFALDRIVG 733 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~----~~~kl~DfGla~~~~ 733 (876)
||+++|+|.+++.+.+ .+++..+..++.||+.|++|||+. +|+||||||+||++.++ +.+||+|||+++...
T Consensus 96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999999997654 689999999999999999999999 99999999999998543 359999999998765
Q ss_pred ccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchh-hHHHHHHHHhhccccccccc
Q 002826 734 EAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESL-DVVKWVRRKINITNGAIQVL 812 (876)
Q Consensus 734 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 812 (876)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.....+.. .....+.. .. ....
T Consensus 172 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~---~~---~~~~ 243 (342)
T 2qr7_A 172 AENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS---GK---FSLS 243 (342)
T ss_dssp CTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHH---CC---CCCC
T ss_pred CCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHcc---CC---cccC
Confidence 4321 22344689999999998877788999999999999999999999986433221 22222111 11 1110
Q ss_pred ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 813 DPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 813 d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
. ..+......+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~----~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 244 G----GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp S----TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred c----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1 1112233467899999999999999999999874
No 209
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-37 Score=335.93 Aligned_cols=263 Identities=22% Similarity=0.305 Sum_probs=198.1
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCcc-----CHHHHHHHHHHHhhccCccccceeeEEEeCCeEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQ-----SSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFL 655 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 655 (876)
.|.....+|.|| ||.||+|... +|+.||+|++...... ....+.+|+++++.++||||+++++++.+.+..++
T Consensus 11 ~y~~~~~lg~G~-~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (346)
T 1ua2_A 11 RYEKLDFLGEGQ-FATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL 89 (346)
T ss_dssp --CEEEEEEEET-TEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred ccEEEeEEeecC-CEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence 444445555555 9999999775 6999999998643221 13467899999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccc
Q 002826 656 IYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEA 735 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 735 (876)
||||+++ +|.+++......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 9999987 89999987777799999999999999999999999 9999999999999999999999999999876533
Q ss_pred ccccccccccccccccCccccCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccccc--
Q 002826 736 AFQSTMSSEYALSCYNAPEYGYSK-KATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVL-- 812 (876)
Q Consensus 736 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 812 (876)
. .......||+.|+|||.+.+. .++.++||||+||++|||++|.+||....... ....................
T Consensus 166 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 242 (346)
T 1ua2_A 166 N--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCS 242 (346)
T ss_dssp C--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTTS
T ss_pred c--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHcCCCChhhhhhhcc
Confidence 2 123345689999999998654 57899999999999999999999987654322 12222221111000000000
Q ss_pred -----------ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002826 813 -----------DPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKAL 852 (876)
Q Consensus 813 -----------d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L 852 (876)
..............+.+++.+||+.||++|||+.|+++.-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred CcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 0001111223345789999999999999999999999853
No 210
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.9e-37 Score=329.24 Aligned_cols=254 Identities=22% Similarity=0.309 Sum_probs=198.2
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEe--CCeEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHS--DESIFLIY 657 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~ 657 (876)
|.....+|.|| ||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+ .+..++||
T Consensus 8 y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 86 (279)
T 2w5a_A 8 YEVLYTIGTGS-YGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86 (279)
T ss_dssp EEEEEEEEECS-SSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEE
T ss_pred eeeehhccCCC-CcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEE
Confidence 33445555555 9999999765 799999999975432 234568899999999999999999998854 57899999
Q ss_pred EcCCCCCHHHHhhcc---CCcCCHHHHHHHHHHHHHHHHHhhccCCCC-----ccccccccCceeeCCCCCeEEccccch
Q 002826 658 EFLQMGSLGDLICRQ---DFQLQWSIRLKIAIGVAQGLAYLHKDYVPH-----LLHRNVKSKNILLDADFEPKLTDFALD 729 (876)
Q Consensus 658 e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----i~H~Dlkp~NIll~~~~~~kl~DfGla 729 (876)
||+++++|.+++... ...+++..+.+++.|++.|++|||+. + |+||||||+||+++.++.+||+|||.+
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp ECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred eCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 999999999999754 34599999999999999999999999 7 999999999999999999999999999
Q ss_pred hhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccc
Q 002826 730 RIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAI 809 (876)
Q Consensus 730 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (876)
+....... ......|++.|+|||...+..++.++||||||+++|||++|+.||....... ....+... ..
T Consensus 164 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~i~~~------~~ 233 (279)
T 2w5a_A 164 RILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--LAGKIREG------KF 233 (279)
T ss_dssp HHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHT------CC
T ss_pred eeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH--HHHHHhhc------cc
Confidence 87654321 1123358899999999988889999999999999999999999998654321 22221111 11
Q ss_pred cccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 002826 810 QVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLST 857 (876)
Q Consensus 810 ~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~ 857 (876)
..+.. .....+.+++.+||+.||++|||+.|+++.+..-.+
T Consensus 234 ~~~~~-------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 234 RRIPY-------RYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp CCCCT-------TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred ccCCc-------ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 11111 123467899999999999999999999997765544
No 211
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2e-36 Score=335.51 Aligned_cols=267 Identities=24% Similarity=0.282 Sum_probs=198.8
Q ss_pred hhhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEE
Q 002826 578 DLVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFL 655 (876)
Q Consensus 578 ~l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 655 (876)
++..+.++..+..|.|+||+||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 108 (360)
T 3eqc_A 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 108 (360)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEE
Confidence 343333344444444459999999765 799999999976422 234678899999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccc
Q 002826 656 IYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEA 735 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 735 (876)
||||+++++|.+++.+.+ .+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 109 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 109 CMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp EECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred EEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 999999999999997654 6899999999999999999999831 7999999999999999999999999999766432
Q ss_pred ccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcc----------
Q 002826 736 AFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINIT---------- 805 (876)
Q Consensus 736 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---------- 805 (876)
. .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||.....................
T Consensus 186 ~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 186 M----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp C--------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred c----ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 2 22345899999999999889999999999999999999999999875543321110000000000
Q ss_pred -------------cccccccChhh----h-hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 806 -------------NGAIQVLDPKI----A-NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 806 -------------~~~~~~~d~~~----~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
......++... . .........+.+++.+||+.||++|||++|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000000000 0 0000123468899999999999999999999873
No 212
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=9.5e-37 Score=329.29 Aligned_cols=250 Identities=21% Similarity=0.309 Sum_probs=194.7
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
.|.....+|.|| ||.||+|... +++.||+|++..........+.+|+++++.++||||+++++++.+++..++||||+
T Consensus 20 ~y~i~~~lg~G~-~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (302)
T 2j7t_A 20 VWEIVGELGDGA-FGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC 98 (302)
T ss_dssp TEEEEEEEECST-TCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred ceeecceeccCC-CeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence 343444555555 9999999775 69999999997766666788999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQST 740 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 740 (876)
++++|.+++.+....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++....... ..
T Consensus 99 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~ 173 (302)
T 2j7t_A 99 PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL--QK 173 (302)
T ss_dssp TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH--HC
T ss_pred CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc--cc
Confidence 99999999887666799999999999999999999999 99999999999999999999999999986543221 11
Q ss_pred cccccccccccCcccc-----CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChh
Q 002826 741 MSSEYALSCYNAPEYG-----YSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPK 815 (876)
Q Consensus 741 ~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 815 (876)
.....||+.|+|||.. ....++.++||||||+++|||++|+.||........ ........ ......+
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~--~~~~~~~- 245 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-----LLKIAKSD--PPTLLTP- 245 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----HHHHHHSC--CCCCSSG-
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-----HHHHhccC--CcccCCc-
Confidence 2234588999999987 466788999999999999999999999976443221 11111110 0000111
Q ss_pred hhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 816 IANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 816 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
......+.+++.+||+.||++|||+.|+++
T Consensus 246 -----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 246 -----SKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -----GGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -----cccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 112345789999999999999999999986
No 213
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8.6e-37 Score=325.07 Aligned_cols=245 Identities=24% Similarity=0.401 Sum_probs=189.7
Q ss_pred cccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEc
Q 002826 584 DEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 659 (876)
+.+....+.|+||.||+|... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 92 (276)
T 2h6d_A 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92 (276)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEec
Confidence 344444444559999999775 79999999996532 23456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccc
Q 002826 660 LQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQS 739 (876)
Q Consensus 660 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 739 (876)
+++++|.+++.+.+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 93 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-- 166 (276)
T 2h6d_A 93 VSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF-- 166 (276)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----
T ss_pred cCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCcc--
Confidence 99999999997654 689999999999999999999999 999999999999999999999999999987654321
Q ss_pred ccccccccccccCccccCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 740 TMSSEYALSCYNAPEYGYSKKA-TAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 740 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
.....|++.|+|||...+..+ +.++||||+|+++|||++|+.||....... ....+.. .. .. + |
T Consensus 167 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~---~~---~~-~-~---- 231 (276)
T 2h6d_A 167 -LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--LFKKIRG---GV---FY-I-P---- 231 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH---CC---CC-C-C----
T ss_pred -eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HHHHhhc---Cc---cc-C-c----
Confidence 223458899999999887654 689999999999999999999997643322 1111111 10 00 0 0
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
......+.+++.+|++.||++|||+.|+++.
T Consensus 232 --~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 232 --EYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1112357899999999999999999999984
No 214
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.7e-36 Score=324.14 Aligned_cols=260 Identities=23% Similarity=0.347 Sum_probs=197.5
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEc
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 659 (876)
|.....+|.|+ ||+||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++.+++..++||||
T Consensus 5 y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (299)
T 2r3i_A 5 FQKVEKIGEGT-YGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83 (299)
T ss_dssp EEEEEEEEECS-SSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhhccCC-CeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEc
Confidence 33445556555 9999999765 799999999865322 2346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccC-CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 660 LQMGSLGDLICRQD-FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 660 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
++ ++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.......
T Consensus 84 ~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~- 158 (299)
T 2r3i_A 84 LH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR- 158 (299)
T ss_dssp CS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB-
T ss_pred cc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc-
Confidence 98 59999987653 4689999999999999999999999 999999999999999999999999999987753321
Q ss_pred cccccccccccccCccccCCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccc----------
Q 002826 739 STMSSEYALSCYNAPEYGYSKK-ATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNG---------- 807 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------- 807 (876)
......+|+.|+|||...+.. ++.++||||||+++|||++|+.||....... ......+........
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 159 -TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp -CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred -ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHhhcCcc
Confidence 223445889999999987654 7899999999999999999999998754332 122222211110000
Q ss_pred ----cccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 808 ----AIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 808 ----~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
......+.+..........+.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000111111112223456889999999999999999999987
No 215
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=326.41 Aligned_cols=244 Identities=23% Similarity=0.322 Sum_probs=192.0
Q ss_pred CCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCCCCHH
Q 002826 588 SAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQMGSLG 666 (876)
Q Consensus 588 ~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 666 (876)
.+|.|+ ||.||+|.. .+++.||+|++........+.+.+|+.+++.++||||+++++++.+.+..++||||+++++|.
T Consensus 29 ~lg~G~-~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 29 VLGKGT-YGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp EEEECS-SSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEeecC-cEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 455555 999999975 578999999998766566678999999999999999999999999999999999999999999
Q ss_pred HHhhccC--CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC-CCCeEEccccchhhcccccccccccc
Q 002826 667 DLICRQD--FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA-DFEPKLTDFALDRIVGEAAFQSTMSS 743 (876)
Q Consensus 667 ~~l~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~-~~~~kl~DfGla~~~~~~~~~~~~~~ 743 (876)
+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||.++....... ....
T Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~ 182 (295)
T 2clq_A 108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP--CTET 182 (295)
T ss_dssp HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------CC
T ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC--cccc
Confidence 9997652 3567899999999999999999999 9999999999999987 89999999999987653221 1233
Q ss_pred ccccccccCccccCCC--CCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcH
Q 002826 744 EYALSCYNAPEYGYSK--KATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQ 821 (876)
Q Consensus 744 ~~gt~~y~aPE~~~~~--~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 821 (876)
..|++.|+|||..... .++.++||||||+++|||++|+.||............. ...... +.+. .
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~--------~~~~---~ 249 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV--GMFKVH--------PEIP---E 249 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH--HHHCCC--------CCCC---T
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh--cccccc--------cccc---c
Confidence 4589999999987654 37889999999999999999999997533322211111 111111 1111 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 822 QQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 822 ~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
.....+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 250 SMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 12345789999999999999999999986
No 216
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2e-36 Score=330.51 Aligned_cols=262 Identities=18% Similarity=0.232 Sum_probs=201.9
Q ss_pred cccchhhhhhcccccC-CCCCCCCceEEEEEEeC-CCcEEEEEEEecCC--ccCHHHHHHHHHHHhhcc-CccccceeeE
Q 002826 572 LRVTEHDLVIGMDEKS-SAGNGGPFGRVYILSLP-SGELIAVKKLVNFG--CQSSKTLKTEVKTLAKIR-HKNIVKVLGF 646 (876)
Q Consensus 572 ~~~~~~~l~~~~~~~~-~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~ 646 (876)
..+...+...++|.+. +..|.|+||+||+|... +|+.||+|++.... ......+.+|+.+++.++ ||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 4444555555555553 44444449999999665 79999999986532 234678899999999994 6999999999
Q ss_pred EEeCCeEEEEEEcCCCCCHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC---CCCeE
Q 002826 647 FHSDESIFLIYEFLQMGSLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA---DFEPK 722 (876)
Q Consensus 647 ~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~---~~~~k 722 (876)
+.+.+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+|
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 99999999999999999999998654 45799999999999999999999999 9999999999999987 78999
Q ss_pred EccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHh
Q 002826 723 LTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKI 802 (876)
Q Consensus 723 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 802 (876)
|+|||+++....... .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||........ ......
T Consensus 175 L~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~~-- 247 (327)
T 3lm5_A 175 IVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET--YLNISQ-- 247 (327)
T ss_dssp ECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH--
T ss_pred EeeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHHHh--
Confidence 999999987654321 2334589999999999988999999999999999999999999976543321 111111
Q ss_pred hcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 803 NITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 803 ~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.. .....+. .......+.+++.+||+.||++|||+.|+++.
T Consensus 248 -~~---~~~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 248 -VN---VDYSEET----FSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp -TC---CCCCTTT----TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -cc---cccCchh----hcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 10 0000111 11223457899999999999999999999875
No 217
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.2e-36 Score=325.19 Aligned_cols=250 Identities=24% Similarity=0.372 Sum_probs=199.2
Q ss_pred hcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEe----------
Q 002826 581 IGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHS---------- 649 (876)
Q Consensus 581 ~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---------- 649 (876)
.+|.....+|.|+ ||.||+|... +++.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 11 MDFKEIELIGSGG-FGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHEEEEEEEECSS-SCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred cccceeeeeccCC-ceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 3555555565555 9999999775 89999999997532 467789999999999999999999864
Q ss_pred ------CCeEEEEEEcCCCCCHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeE
Q 002826 650 ------DESIFLIYEFLQMGSLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPK 722 (876)
Q Consensus 650 ------~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~k 722 (876)
....++||||+++++|.+++.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEE
Confidence 44589999999999999999754 45799999999999999999999999 999999999999999999999
Q ss_pred EccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHh
Q 002826 723 LTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKI 802 (876)
Q Consensus 723 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 802 (876)
|+|||+++...... ......|++.|+|||...+..++.++||||||+++|||++|..|+.. .. .......
T Consensus 163 l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~----~~---~~~~~~~ 232 (284)
T 2a19_B 163 IGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE----TS---KFFTDLR 232 (284)
T ss_dssp ECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH----HH---HHHHHHH
T ss_pred ECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh----HH---HHHHHhh
Confidence 99999998765432 12334589999999999888899999999999999999999987632 11 1111111
Q ss_pred hcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcc
Q 002826 803 NITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSL 861 (876)
Q Consensus 803 ~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~ 861 (876)
.. .+.+ .....+.+++.+||+.||++|||+.|+++.|+.+......
T Consensus 233 ~~------~~~~-------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 233 DG------IISD-------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp TT------CCCT-------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred cc------cccc-------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 10 0111 1123467899999999999999999999999998765544
No 218
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=9.1e-37 Score=326.40 Aligned_cols=243 Identities=22% Similarity=0.351 Sum_probs=196.9
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
|.....+|.|+ ||.||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 16 y~~~~~lg~G~-~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 94 (284)
T 2vgo_A 16 FDIGRPLGKGK-FGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE 94 (284)
T ss_dssp EEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceeeheecCCC-CeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEE
Confidence 33334455554 9999999765 68899999986431 2345678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
|+++++|.+++.+.+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 168 (284)
T 2vgo_A 95 FAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-- 168 (284)
T ss_dssp CCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC--
T ss_pred eCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcccc--
Confidence 999999999997654 689999999999999999999999 99999999999999999999999999987654322
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
.....|++.|+|||...+..++.++||||+|+++|||++|+.||........ ........ ..+.
T Consensus 169 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~--------~~~~- 232 (284)
T 2vgo_A 169 --RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-----HRRIVNVD--------LKFP- 232 (284)
T ss_dssp --BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-----HHHHHTTC--------CCCC-
T ss_pred --cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH-----HHHHhccc--------cCCC-
Confidence 2234589999999999988899999999999999999999999976443221 11111111 0010
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
......+.+++.+|++.||++|||+.|+++
T Consensus 233 --~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 233 --PFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp --TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 112335789999999999999999999987
No 219
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=327.11 Aligned_cols=248 Identities=20% Similarity=0.322 Sum_probs=197.7
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
.|.....+|.|+ ||.||+|... +|+.||+|++... .....+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 30 ~y~~~~~lg~G~-~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 30 VFDVLEKLGEGS-YGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp CEEEEEECC-----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhheeeccCC-CeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 344445555555 9999999765 6999999999754 34577899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQST 740 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 740 (876)
++++|.+++......+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++....... .
T Consensus 107 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~ 181 (314)
T 3com_A 107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA--K 181 (314)
T ss_dssp TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS--C
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc--c
Confidence 99999999976666899999999999999999999999 999999999999999999999999999977654321 2
Q ss_pred cccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhc
Q 002826 741 MSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCY 820 (876)
Q Consensus 741 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 820 (876)
.....|++.|+|||...+..++.++||||||+++|||++|+.||........ ...... .. ......+
T Consensus 182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~---~~--~~~~~~~------ 248 (314)
T 3com_A 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA--IFMIPT---NP--PPTFRKP------ 248 (314)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHHH---SC--CCCCSSG------
T ss_pred cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHhc---CC--CcccCCc------
Confidence 2344589999999999888899999999999999999999999976443221 111111 10 0000001
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 821 QQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 821 ~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
......+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 249 ELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 112346789999999999999999999986
No 220
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.7e-36 Score=323.81 Aligned_cols=245 Identities=20% Similarity=0.270 Sum_probs=191.6
Q ss_pred cccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCC--ccCHHHHHHHHHHHhhccCccccceeeEEEe----CCeEEEE
Q 002826 584 DEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFG--CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHS----DESIFLI 656 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv 656 (876)
+......|.|+||+||+|.. .++..||+|++.... ....+.+.+|+.+++.++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 34444344445999999966 478899999987542 2234678899999999999999999999876 3568999
Q ss_pred EEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCC--ccccccccCceeeC-CCCCeEEccccchhhcc
Q 002826 657 YEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPH--LLHRNVKSKNILLD-ADFEPKLTDFALDRIVG 733 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlkp~NIll~-~~~~~kl~DfGla~~~~ 733 (876)
|||+++++|.+++.+.. .+++..+..++.|++.|++|||+. + |+||||||+||+++ .++.+||+|||+++...
T Consensus 108 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999997653 689999999999999999999999 7 99999999999998 78999999999997654
Q ss_pred ccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccC
Q 002826 734 EAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLD 813 (876)
Q Consensus 734 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 813 (876)
... .....||+.|+|||.+. +.++.++||||+|+++|+|++|+.||........ ......... ..
T Consensus 184 ~~~----~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~----~~~~~~~~~------~~ 248 (290)
T 1t4h_A 184 ASF----AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ----IYRRVTSGV------KP 248 (290)
T ss_dssp TTS----BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH----HHHHHTTTC------CC
T ss_pred ccc----cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH----HHHHHhccC------Cc
Confidence 332 22345899999999876 4589999999999999999999999976443222 111111110 00
Q ss_pred hhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 814 PKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 814 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
+.... .....+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 249 ASFDK---VAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGGGG---CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccCC---CCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11111 11235789999999999999999999986
No 221
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.5e-36 Score=345.92 Aligned_cols=253 Identities=25% Similarity=0.358 Sum_probs=197.6
Q ss_pred hhhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC--ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEE
Q 002826 578 DLVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG--CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIF 654 (876)
Q Consensus 578 ~l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 654 (876)
.+...|.....+|.|| ||+||+|+.. +++.||+|++.... ......+.+|+.+++.++||||+++++++.+.+..|
T Consensus 34 ~~~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 112 (494)
T 3lij_A 34 HLSEMYQRVKKLGSGA-YGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYY 112 (494)
T ss_dssp CHHHHEEEEEEEECC----EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred chhcCeEEeeEEecCC-CEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 3444555556666665 9999999765 78999999997543 234577899999999999999999999999999999
Q ss_pred EEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC---CCCeEEccccchhh
Q 002826 655 LIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA---DFEPKLTDFALDRI 731 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~---~~~~kl~DfGla~~ 731 (876)
+||||+++|+|.+.+.... .+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 113 lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 113 LVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999999887653 689999999999999999999999 9999999999999976 45599999999987
Q ss_pred ccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccc
Q 002826 732 VGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQV 811 (876)
Q Consensus 732 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (876)
..... ......||+.|+|||++. ..++.++||||+||++|+|++|++||....... ....+... ....
T Consensus 189 ~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~~------~~~~ 256 (494)
T 3lij_A 189 FENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE--ILRKVEKG------KYTF 256 (494)
T ss_dssp CBTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHT------CCCC
T ss_pred CCCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhC------CCCC
Confidence 65432 233456999999999876 468999999999999999999999998654322 22222211 1111
Q ss_pred cChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 812 LDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 812 ~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
..+.. ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 257 ~~~~~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 257 DSPEW----KNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp CSGGG----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred Cchhc----ccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 11211 1223457899999999999999999999864
No 222
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2e-36 Score=346.63 Aligned_cols=264 Identities=20% Similarity=0.298 Sum_probs=182.4
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeC-----CeE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSD-----ESI 653 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 653 (876)
.|.....+|.| +||+||+|.. .+|+.||||++..... ...+++.+|+++++.++||||+++++++... +..
T Consensus 54 ~y~~~~~lG~G-~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 54 RYEIRHLIGTG-SYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TEEECCC--------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CeEEeeEeeec-CCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 34444445554 5999999965 4799999999965322 2346788999999999999999999999543 579
Q ss_pred EEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcc
Q 002826 654 FLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVG 733 (876)
Q Consensus 654 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~ 733 (876)
|+||||++ ++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 133 ~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp EEEECCCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred EEEEeccc-cchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 99999985 5999998654 4699999999999999999999999 99999999999999999999999999998765
Q ss_pred ccccc-------------------------cccccccccccccCcccc-CCCCCCCccchHHHHHHHHHHHh--------
Q 002826 734 EAAFQ-------------------------STMSSEYALSCYNAPEYG-YSKKATAQMDAYSFGVVLLELIT-------- 779 (876)
Q Consensus 734 ~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlGv~l~ellt-------- 779 (876)
..... .......||+.|+|||++ ....++.++||||+||++|||++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~ 287 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSS
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccc
Confidence 22110 123445689999999975 45679999999999999999999
Q ss_pred ---CCCCCCCCCcc------------------hhhHHHHHHHHhhccc-----------------ccccccChhhhhhcH
Q 002826 780 ---GRQAEQAEPAE------------------SLDVVKWVRRKINITN-----------------GAIQVLDPKIANCYQ 821 (876)
Q Consensus 780 ---g~~p~~~~~~~------------------~~~~~~~~~~~~~~~~-----------------~~~~~~d~~~~~~~~ 821 (876)
|+++|.+.... ..+....+........ .........+.....
T Consensus 288 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (458)
T 3rp9_A 288 HADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFP 367 (458)
T ss_dssp GGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGST
T ss_pred cccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCC
Confidence 66666543210 0011111111000000 000000001111222
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 822 QQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 822 ~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.....+.+++.+||..||++|||+.|+++.
T Consensus 368 ~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 368 ASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 335578899999999999999999999984
No 223
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.7e-36 Score=327.63 Aligned_cols=247 Identities=22% Similarity=0.325 Sum_probs=200.8
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
|.....+|.|| ||.||+|.. .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+++..++||||+
T Consensus 24 y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 24 FTKLEKIGKGS-FGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp EEEEEEEEECS-SSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHhhhhcccC-CeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 44455566665 999999965 4799999999975432 34578899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccc
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQST 740 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 740 (876)
++++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........ .
T Consensus 103 ~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~ 175 (303)
T 3a7i_A 103 GGGSALDLLEP--GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--K 175 (303)
T ss_dssp TTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC--C
T ss_pred CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccc--c
Confidence 99999999865 3689999999999999999999999 999999999999999999999999999977654321 2
Q ss_pred cccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhc
Q 002826 741 MSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCY 820 (876)
Q Consensus 741 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 820 (876)
.....|++.|+|||...+..++.++||||||+++|||++|+.||....... ........ ....+..
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~------~~~~~~~------ 241 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLIPKN------NPPTLEG------ 241 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHS------CCCCCCS------
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHhhcC------CCCCCcc------
Confidence 234458999999999998889999999999999999999999997643322 11111111 0011111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002826 821 QQQMLGALEIALRCTSVMPEKRPSMFEVVKAL 852 (876)
Q Consensus 821 ~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L 852 (876)
.....+.+++.+||+.||++|||+.|+++..
T Consensus 242 -~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 242 -NYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp -SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred -ccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 1223578999999999999999999998853
No 224
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.6e-36 Score=331.74 Aligned_cols=260 Identities=18% Similarity=0.255 Sum_probs=188.9
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCcc--CHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQ--SSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
.|.....+|.|+ ||+||+|.. .+++.||+|++...... ....+.+|++++++++||||+++++++.+++..++|||
T Consensus 35 ~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 113 (329)
T 3gbz_A 35 RYRRITKLGEGT-YGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFE 113 (329)
T ss_dssp GEEEEEEEEECS-SSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hEEEEEEEEecC-CeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEe
Confidence 444445555555 999999965 58999999998654322 23567789999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeC-----CCCCeEEccccchhhcc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLD-----ADFEPKLTDFALDRIVG 733 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~-----~~~~~kl~DfGla~~~~ 733 (876)
|+++ +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++...
T Consensus 114 ~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 114 YAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp CCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred cCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 9985 9999997654 689999999999999999999999 999999999999994 45569999999998775
Q ss_pred ccccccccccccccccccCccccCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccc---
Q 002826 734 EAAFQSTMSSEYALSCYNAPEYGYSK-KATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAI--- 809 (876)
Q Consensus 734 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 809 (876)
.... ......||+.|+|||.+.+. .++.++||||+||++|||++|+.||........ ................
T Consensus 189 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 265 (329)
T 3gbz_A 189 IPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ-LFKIFEVLGLPDDTTWPGV 265 (329)
T ss_dssp -------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCTTTSTTG
T ss_pred Cccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH-HHHHHHHhCCCchhhhhhh
Confidence 3321 23344579999999998764 489999999999999999999999987543321 2222221110000000
Q ss_pred -----------cccChhhh-hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 810 -----------QVLDPKIA-NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 810 -----------~~~d~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
......+. .........+.+++.+||+.||++|||+.|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000000 001112356789999999999999999999986
No 225
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2e-36 Score=331.25 Aligned_cols=261 Identities=22% Similarity=0.385 Sum_probs=193.8
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccC--HHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEc
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQS--SKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 659 (876)
|.....+|.|| ||.||+|... +|+.||+|++....... .+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 27 y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 105 (331)
T 4aaa_A 27 YENLGLVGEGS-YGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEF 105 (331)
T ss_dssp EEEEEEGGGGT-TSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred heeeeEEeecC-CEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEec
Confidence 34445555555 9999999765 69999999986543222 35577899999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccc
Q 002826 660 LQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQS 739 (876)
Q Consensus 660 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 739 (876)
+++++|.++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 106 ~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 179 (331)
T 4aaa_A 106 VDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-- 179 (331)
T ss_dssp CSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred CCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc--
Confidence 9998888876544 3699999999999999999999999 999999999999999999999999999987654321
Q ss_pred ccccccccccccCccccCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhc--------------
Q 002826 740 TMSSEYALSCYNAPEYGYSK-KATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINI-------------- 804 (876)
Q Consensus 740 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------------- 804 (876)
......||+.|+|||.+.+. .++.++||||+|+++|||++|+.||........ ...........
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhhhHhhhcccc
Confidence 22344589999999998765 689999999999999999999999987554322 11111110000
Q ss_pred ccc-cccccC-hhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 805 TNG-AIQVLD-PKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 805 ~~~-~~~~~d-~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
... ...... .............+.+++.+||+.||++|||+.|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000 000000 00111122335678999999999999999999999873
No 226
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-36 Score=335.44 Aligned_cols=253 Identities=23% Similarity=0.299 Sum_probs=197.2
Q ss_pred cccccCCCCCCCCceEEEEEEe----CCCcEEEEEEEecCC----ccCHHHHHHHHHHHhhc-cCccccceeeEEEeCCe
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL----PSGELIAVKKLVNFG----CQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDES 652 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 652 (876)
+|.....+|.|| ||+||+|+. .+|+.||||++.... ......+.+|+++++.+ +||||+++++++.+.+.
T Consensus 55 ~y~~~~~lG~G~-~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 55 NFELLKVLGTGA-YGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GEEEEEEEEETT-TEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred ceEEEEEeccCC-CEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 344445555555 999999976 478999999986432 23445677899999999 69999999999999999
Q ss_pred EEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhc
Q 002826 653 IFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIV 732 (876)
Q Consensus 653 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~ 732 (876)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred EEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 999999999999999997654 689999999999999999999999 9999999999999999999999999999876
Q ss_pred cccccccccccccccccccCccccCC--CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccc
Q 002826 733 GEAAFQSTMSSEYALSCYNAPEYGYS--KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQ 810 (876)
Q Consensus 733 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (876)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .....+......
T Consensus 210 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~~----- 282 (355)
T 1vzo_A 210 VADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRILKSE----- 282 (355)
T ss_dssp CGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHHHCC-----
T ss_pred ccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHHHHHhccC-----
Confidence 43222 12234468999999999875 3478899999999999999999999976443221 122222221111
Q ss_pred ccChhhhhhcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 002826 811 VLDPKIANCYQQQMLGALEIALRCTSVMPEKRP-----SMFEVVKAL 852 (876)
Q Consensus 811 ~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~ell~~L 852 (876)
+.. .......+.+++.+||+.||++|| |++|+++..
T Consensus 283 ---~~~---~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 ---PPY---PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ---CCC---CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ---CCC---CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 001 111234578999999999999999 999998764
No 227
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-36 Score=333.65 Aligned_cols=261 Identities=23% Similarity=0.319 Sum_probs=193.7
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeC------Ce
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSD------ES 652 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 652 (876)
.|.....+|.|+ ||.||+|.. .+|+.||||++..... ...+.+.+|+++++.++||||+++++++... ..
T Consensus 26 ~y~~~~~lG~G~-~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 26 VYRDLQPVGSGA-YGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SEEEEEEC-------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred eEEEeEEeeecC-CeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 444445555555 999999976 5799999999865322 2245678999999999999999999999765 34
Q ss_pred EEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhc
Q 002826 653 IFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIV 732 (876)
Q Consensus 653 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~ 732 (876)
.|+||||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 69999999 7799999876 3689999999999999999999999 9999999999999999999999999999875
Q ss_pred cccccccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccc---
Q 002826 733 GEAAFQSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGA--- 808 (876)
Q Consensus 733 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 808 (876)
... .....+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||........ ...............
T Consensus 179 ~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 179 DSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ-LKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHHHT
T ss_pred ccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHH
Confidence 432 234468999999998776 6789999999999999999999999986543221 111111100000000
Q ss_pred -------------ccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhc
Q 002826 809 -------------IQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA--LHSL 855 (876)
Q Consensus 809 -------------~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~--L~~i 855 (876)
.......+..........+.+++.+|+..||++|||+.|+++. ++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence 0000111112222334568899999999999999999999983 4444
No 228
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.5e-36 Score=333.56 Aligned_cols=249 Identities=20% Similarity=0.325 Sum_probs=197.3
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCcc--------CHHHHHHHHHHHhhc-cCccccceeeEEEeCC
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQ--------SSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDE 651 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 651 (876)
.|.....+|.|+ ||.||+|... +|+.||||++...... ..+.+.+|+.+++++ +||||+++++++...+
T Consensus 95 ~y~~~~~lg~G~-~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 95 KYDPKDVIGRGV-SSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hcccceEEecCC-CEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 444445566555 9999999775 7999999999754321 134677899999999 7999999999999999
Q ss_pred eEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhh
Q 002826 652 SIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRI 731 (876)
Q Consensus 652 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~ 731 (876)
..|+||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~ 249 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCH 249 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCcccc
Confidence 999999999999999999765 3689999999999999999999999 999999999999999999999999999987
Q ss_pred ccccccccccccccccccccCccccC------CCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcc
Q 002826 732 VGEAAFQSTMSSEYALSCYNAPEYGY------SKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINIT 805 (876)
Q Consensus 732 ~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 805 (876)
..... ......||+.|+|||++. ...++.++|||||||++|||++|+.||....... ....+...
T Consensus 250 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~~~i~~~---- 320 (365)
T 2y7j_A 250 LEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL--MLRMIMEG---- 320 (365)
T ss_dssp CCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHT----
T ss_pred cCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH--HHHHHHhC----
Confidence 65432 223456899999999864 3357889999999999999999999997643221 11111111
Q ss_pred cccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 806 NGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 806 ~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
......+.. ......+.+++.+||+.||++|||+.|+++
T Consensus 321 --~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 321 --QYQFSSPEW----DDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp --CCCCCHHHH----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --CCCCCCccc----ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 001111111 122345789999999999999999999987
No 229
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.9e-36 Score=328.86 Aligned_cols=255 Identities=18% Similarity=0.229 Sum_probs=196.2
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhcc-CccccceeeEEEe--CCeEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIR-HKNIVKVLGFFHS--DESIFLIY 657 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~lv~ 657 (876)
+|.....+|.|+ ||+||+|.. .+++.||+|++.. ...+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 37 ~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 37 DYQLVRKLGRGK-YSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred ceEEEEEecccC-CeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 344445555555 999999965 5899999999864 45678999999999997 9999999999988 66799999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCC-CeEEccccchhhccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADF-EPKLTDFALDRIVGEAA 736 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~-~~kl~DfGla~~~~~~~ 736 (876)
||+++++|.+++. .+++..+..++.|++.|++|||+. +|+||||||+||+++.++ .+||+|||+++......
T Consensus 113 e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp ECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred eccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 9999999999884 488999999999999999999999 999999999999999776 89999999998765433
Q ss_pred cccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcc-----ccccc
Q 002826 737 FQSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINIT-----NGAIQ 810 (876)
Q Consensus 737 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 810 (876)
. .....|+..|+|||.+.+ ..++.++||||+||++|||++|+.||..................... .....
T Consensus 186 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T 3nsz_A 186 E---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 262 (330)
T ss_dssp C---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred c---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence 2 234458899999999876 66899999999999999999999999765544332222221110000 00000
Q ss_pred ccChhhh-----------------hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 811 VLDPKIA-----------------NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 811 ~~d~~~~-----------------~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
..++... .........+.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0111100 001113456889999999999999999999987
No 230
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3e-37 Score=331.32 Aligned_cols=260 Identities=21% Similarity=0.318 Sum_probs=193.2
Q ss_pred ccccCCCCCCCCceEEEEEEeC--CCc--EEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP--SGE--LIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFL 655 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 655 (876)
|.....+|.|+ ||+||+|++. +++ .||+|++.... ....+.+.+|++++++++||||+++++++.+++ .++
T Consensus 20 y~~~~~lg~G~-~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 97 (291)
T 1u46_A 20 LRLLEKLGDGS-FGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKM 97 (291)
T ss_dssp EEEEEECC-----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEE
T ss_pred eeeeeeecCCC-ceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-cee
Confidence 33444555555 9999999753 333 68999986542 223467889999999999999999999998755 889
Q ss_pred EEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccc
Q 002826 656 IYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEA 735 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 735 (876)
||||+++++|.+++......+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 98 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 9999999999999987666799999999999999999999999 9999999999999999999999999999877543
Q ss_pred ccc-cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccC
Q 002826 736 AFQ-STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLD 813 (876)
Q Consensus 736 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 813 (876)
... .......+|..|+|||...+..++.++||||||+++|||++ |+.||....... ...... ... ...
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~---~~~--~~~--- 244 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--ILHKID---KEG--ERL--- 244 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHH---TSC--CCC---
T ss_pred ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH--HHHHHH---ccC--CCC---
Confidence 221 12233457788999999888888999999999999999999 999997654322 111111 110 000
Q ss_pred hhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCcc
Q 002826 814 PKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSL 861 (876)
Q Consensus 814 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~ 861 (876)
+. ....+..+.+++.+||+.||++|||+.|+++.|+++.+....
T Consensus 245 ~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 288 (291)
T 1u46_A 245 PR----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMR 288 (291)
T ss_dssp CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred CC----CcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccchh
Confidence 00 112234688999999999999999999999999998765443
No 231
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.1e-36 Score=327.40 Aligned_cols=247 Identities=21% Similarity=0.316 Sum_probs=198.2
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc---cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC---QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
.|.....+|.|| ||.||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 16 ~y~~~~~lg~G~-~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 16 RYVRGRFLGKGG-FAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEeecC-CEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 333444455555 9999999765 688999999875432 23457889999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
||+++++|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 95 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 95 ELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp ECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 9999999999887654 689999999999999999999999 999999999999999999999999999987653221
Q ss_pred ccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 738 QSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
......||+.|+|||...+..++.++||||+|+++|||++|+.||........ ........ .. +.
T Consensus 171 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~~---~~-~~---- 235 (294)
T 2rku_A 171 --RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-----YLRIKKNE---YS-IP---- 235 (294)
T ss_dssp --CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-----HHHHHTTC---CC-CC----
T ss_pred --ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHhhcc---CC-Cc----
Confidence 12334589999999999888899999999999999999999999976543221 11111111 00 00
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
......+.+++.+||+.||++|||+.|+++.
T Consensus 236 ---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 ---KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1112357889999999999999999999974
No 232
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.6e-36 Score=342.35 Aligned_cols=198 Identities=23% Similarity=0.367 Sum_probs=160.0
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeC-----CeE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSD-----ESI 653 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 653 (876)
.|.....+|.|+ ||.||+|.. .+|+.||||++..... ...+.+.+|+++++.++||||+++++++... +..
T Consensus 27 ~y~~~~~lG~G~-~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 27 NYIIKHLIGRGS-YGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TEEEEEEEEEET-TEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CEEEEEEEeecC-CEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 444445555555 999999965 4789999999965322 2346788999999999999999999999776 579
Q ss_pred EEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcc
Q 002826 654 FLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVG 733 (876)
Q Consensus 654 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~ 733 (876)
|+||||+++ +|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 106 ~lv~e~~~~-~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 106 YIVLEIADS-DLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp EEEEECCSE-EHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred EEEEecCCc-CHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 999999875 999999764 4699999999999999999999999 99999999999999999999999999998765
Q ss_pred ccccc--------------------cccccccccccccCcccc-CCCCCCCccchHHHHHHHHHHHhCCCCCC
Q 002826 734 EAAFQ--------------------STMSSEYALSCYNAPEYG-YSKKATAQMDAYSFGVVLLELITGRQAEQ 785 (876)
Q Consensus 734 ~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlGv~l~elltg~~p~~ 785 (876)
..... .......||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 33211 123456789999999985 55679999999999999999998555443
No 233
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.9e-36 Score=333.40 Aligned_cols=261 Identities=21% Similarity=0.256 Sum_probs=191.1
Q ss_pred cccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccC-----------HHHHHHHHHHHhhccCccccceeeEEEe-
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQS-----------SKTLKTEVKTLAKIRHKNIVKVLGFFHS- 649 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~~~~~~~~- 649 (876)
.|.....+|.|| ||.||+|...+|+.||||++....... .+.+.+|++++++++||||+++++++..
T Consensus 23 ~y~~~~~lg~G~-~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 101 (362)
T 3pg1_A 23 PYTVQRFISSGS-YGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF 101 (362)
T ss_dssp SCEEEEEEEEET-TEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEEC
T ss_pred ceEEeEEeccCC-CEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEec
Confidence 444444555555 999999988889999999986532221 2678899999999999999999999854
Q ss_pred ----CCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEcc
Q 002826 650 ----DESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTD 725 (876)
Q Consensus 650 ----~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~D 725 (876)
....|+||||++ |+|.+++......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 102 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 102 EEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp CTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred cCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEEEe
Confidence 336899999998 589998887777899999999999999999999999 999999999999999999999999
Q ss_pred ccchhhccccccccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhh-
Q 002826 726 FALDRIVGEAAFQSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKIN- 803 (876)
Q Consensus 726 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~- 803 (876)
||+++...... ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||........ ..........
T Consensus 178 fg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~ 253 (362)
T 3pg1_A 178 FNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ-LNKIVEVVGTP 253 (362)
T ss_dssp TTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCC
T ss_pred cCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCCC
Confidence 99997654332 2233458899999998876 6789999999999999999999999987543221 1111110000
Q ss_pred ----------------cccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 804 ----------------ITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 804 ----------------~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.......................+.+++.+||+.||++|||+.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 254 KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000000111111112222334568899999999999999999999874
No 234
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=6.8e-36 Score=334.92 Aligned_cols=312 Identities=19% Similarity=0.207 Sum_probs=226.8
Q ss_pred CccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCC-CcccccCcccEEEecCCCCcccCCccccCCCCCc
Q 002826 155 SLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIP-SDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLS 233 (876)
Q Consensus 155 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 233 (876)
.++++++|++++|.++...+..|.++++|++|+|++|+ +..++ ..|..+++|++|+|++|++++..|..|.++++|+
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~--i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 120 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQ--IEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLT 120 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSC--CCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCc--ccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCC
Confidence 35677777777777775555567777777777777776 34443 4677777788888888888877778888888888
Q ss_pred EEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccc
Q 002826 234 ILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDN 313 (876)
Q Consensus 234 ~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 313 (876)
+|+|++|+++ .+|..++..+++|++|++++|++++..+..+..+++|++|++++|++++. .+..+++|+.|++++|
T Consensus 121 ~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 121 VLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYN 196 (390)
T ss_dssp EEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSS
T ss_pred EEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccc
Confidence 8888888888 77777766788888888888888877777788888888888888888754 3566777888888888
Q ss_pred cCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCC
Q 002826 314 GFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPP 393 (876)
Q Consensus 314 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~ 393 (876)
.+++ +...++|+.|++++|+++..... ..++|+.|++++|++++. ..+..+++|++|++++|.+++..|.
T Consensus 197 ~l~~-----~~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~ 266 (390)
T 3o6n_A 197 LLST-----LAIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYH 266 (390)
T ss_dssp CCSE-----EECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESG
T ss_pred cccc-----cCCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChh
Confidence 7763 23345778888888888755332 246788888888888753 4677777788888888877777777
Q ss_pred CcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCcccccccce
Q 002826 394 NFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNLKLAL 473 (876)
Q Consensus 394 ~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~ 473 (876)
.|..+++|+.|+|++|++++.+..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|++++.
T Consensus 267 ~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~------------ 333 (390)
T 3o6n_A 267 PFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL------------ 333 (390)
T ss_dssp GGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC------------
T ss_pred HccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee------------
Confidence 777777777777777777766556666777777777777777 4555666777777777777777632
Q ss_pred EEccCCccccccCCcccCCCCCccccCCCCCCCC
Q 002826 474 FNVSFNKLSGRVPYSLISGLPASYLQGNPGLCGP 507 (876)
Q Consensus 474 l~ls~N~l~~~~p~~~~~~~~~~~~~~N~~~C~~ 507 (876)
|...+.++..+++.+||+.|++
T Consensus 334 ------------~~~~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 334 ------------KLSTHHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp ------------CCCTTCCCSEEECCSSCEEHHH
T ss_pred ------------CchhhccCCEEEcCCCCccchh
Confidence 2222344566677778877754
No 235
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=6.9e-36 Score=344.09 Aligned_cols=250 Identities=21% Similarity=0.266 Sum_probs=198.4
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
|.....+|.|| ||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 187 f~~~~~LG~G~-fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE 265 (543)
T 3c4z_A 187 FLDFRVLGRGG-FGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMT 265 (543)
T ss_dssp EEEEEEEEECS-SSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEeeCC-CeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEE
Confidence 33344455555 9999999775 79999999996532 2345678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhcc---CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccc
Q 002826 659 FLQMGSLGDLICRQ---DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEA 735 (876)
Q Consensus 659 ~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 735 (876)
|++||+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 266 ~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~ 342 (543)
T 3c4z_A 266 IMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342 (543)
T ss_dssp CCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred eccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCC
Confidence 99999999998754 34699999999999999999999999 9999999999999999999999999999876543
Q ss_pred ccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChh
Q 002826 736 AFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPK 815 (876)
Q Consensus 736 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 815 (876)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ..+..+.........
T Consensus 343 ~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~~~~~~i~~~~~~~------- 412 (543)
T 3c4z_A 343 QT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRVLEQAVTY------- 412 (543)
T ss_dssp CC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HHHHHHHHHHCCCCC-------
T ss_pred Cc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HHHHHHHHhhcccCC-------
Confidence 21 12334699999999999998999999999999999999999999987543211 112222211111000
Q ss_pred hhhhcHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 002826 816 IANCYQQQMLGALEIALRCTSVMPEKRPSM-----FEVVK 850 (876)
Q Consensus 816 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~-----~ell~ 850 (876)
+...+..+.+++.+||+.||++||++ .|+++
T Consensus 413 ----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 413 ----PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp ----CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ----CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 11123467899999999999999975 66654
No 236
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=332.56 Aligned_cols=253 Identities=22% Similarity=0.266 Sum_probs=181.7
Q ss_pred ccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhcc-CccccceeeEEE--------eCCeEE
Q 002826 585 EKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIR-HKNIVKVLGFFH--------SDESIF 654 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~--------~~~~~~ 654 (876)
++.+..+.|+||.||+|.. .+++.||+|++........+.+.+|+.+++++. ||||+++++++. .....+
T Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~ 110 (337)
T 3ll6_A 31 RVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFL 110 (337)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEE
T ss_pred EEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEE
Confidence 3444444445999999976 479999999987655455677889999999996 999999999994 334589
Q ss_pred EEEEcCCCCCHHHHhhc--cCCcCCHHHHHHHHHHHHHHHHHhhccCCCC--ccccccccCceeeCCCCCeEEccccchh
Q 002826 655 LIYEFLQMGSLGDLICR--QDFQLQWSIRLKIAIGVAQGLAYLHKDYVPH--LLHRNVKSKNILLDADFEPKLTDFALDR 730 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlkp~NIll~~~~~~kl~DfGla~ 730 (876)
+||||++ |+|.+++.. ....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++
T Consensus 111 lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 111 LLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred EEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 9999996 599998865 345699999999999999999999998 7 9999999999999999999999999998
Q ss_pred hcccccccc----------ccccccccccccCcccc---CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHH
Q 002826 731 IVGEAAFQS----------TMSSEYALSCYNAPEYG---YSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKW 797 (876)
Q Consensus 731 ~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~ 797 (876)
......... ......||+.|+|||.+ ....++.++||||||+++|||++|+.||....... .
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-----~ 261 (337)
T 3ll6_A 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-----I 261 (337)
T ss_dssp CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-----h
Confidence 765322111 11134588999999987 56678899999999999999999999997533221 1
Q ss_pred HHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCC
Q 002826 798 VRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRT 859 (876)
Q Consensus 798 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~ 859 (876)
........ ... .....+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 262 ~~~~~~~~--~~~-----------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 262 VNGKYSIP--PHD-----------TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp ----CCCC--TTC-----------CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred hcCcccCC--ccc-----------ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 11111110 000 01123678999999999999999999999999987543
No 237
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.5e-36 Score=348.50 Aligned_cols=253 Identities=22% Similarity=0.331 Sum_probs=199.1
Q ss_pred hhhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc-------------cCHHHHHHHHHHHhhccCccccce
Q 002826 578 DLVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC-------------QSSKTLKTEVKTLAKIRHKNIVKV 643 (876)
Q Consensus 578 ~l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~ 643 (876)
.+...|.....+|.|+ ||+||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++
T Consensus 33 ~i~~~Y~~~~~lG~G~-~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~ 111 (504)
T 3q5i_A 33 KIGESYFKVRKLGSGA-YGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL 111 (504)
T ss_dssp CGGGTEEEEEEEEC---CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred CcccceEEEeEecccC-CeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 3444555556666655 9999999764 689999999965321 234678899999999999999999
Q ss_pred eeEEEeCCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCC---C
Q 002826 644 LGFFHSDESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADF---E 720 (876)
Q Consensus 644 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~---~ 720 (876)
++++.+.+..|+||||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++ .
T Consensus 112 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 112 FDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEEEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999999999999987654 699999999999999999999999 999999999999998765 6
Q ss_pred eEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHH
Q 002826 721 PKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRR 800 (876)
Q Consensus 721 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 800 (876)
+||+|||+++...... ......||+.|+|||++. +.++.++||||+||++|+|++|++||....... ....+..
T Consensus 188 ~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~ 261 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD--IIKKVEK 261 (504)
T ss_dssp EEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH
T ss_pred EEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHc
Confidence 9999999998765432 233456899999999876 468999999999999999999999998754332 2222221
Q ss_pred HhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 801 KINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 801 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
. . . .++.. .+...+..+.+++.+|++.||++|||+.|+++.
T Consensus 262 ~---~---~-~~~~~---~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 262 G---K---Y-YFDFN---DWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp C---C---C-CCCHH---HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C---C---C-CCCcc---ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1 0 0 00111 111223468899999999999999999999864
No 238
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.7e-36 Score=345.29 Aligned_cols=249 Identities=24% Similarity=0.352 Sum_probs=199.6
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC---ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 657 (876)
.|.....+|.|+ ||+||+|... +|+.||||++.... ......+.+|++++++++||||+++++++.+.+..|+||
T Consensus 27 ~y~~~~~lg~G~-~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 27 RYKGQRVLGKGS-FGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEeeEEecCC-CEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 344444455554 9999999765 89999999996543 245678999999999999999999999999999999999
Q ss_pred EcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceee---CCCCCeEEccccchhhccc
Q 002826 658 EFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILL---DADFEPKLTDFALDRIVGE 734 (876)
Q Consensus 658 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll---~~~~~~kl~DfGla~~~~~ 734 (876)
||+.+|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 106 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 106 EVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 9999999999987654 689999999999999999999999 99999999999999 4678999999999987764
Q ss_pred cccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccCh
Q 002826 735 AAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDP 814 (876)
Q Consensus 735 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 814 (876)
... .....||+.|+|||++.+ .++.++||||+||++|+|++|++||....... ....+... ......+
T Consensus 182 ~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~~------~~~~~~~ 249 (484)
T 3nyv_A 182 SKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD--ILKKVEKG------KYTFELP 249 (484)
T ss_dssp CCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHC------CCCCCSG
T ss_pred ccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHcC------CCCCCCc
Confidence 332 233458999999998765 68999999999999999999999998654322 22222221 0111111
Q ss_pred hhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 815 KIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 815 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.. ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 250 ~~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 250 QW----KKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GG----GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 11 1223467899999999999999999999874
No 239
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=328.30 Aligned_cols=259 Identities=24% Similarity=0.302 Sum_probs=193.9
Q ss_pred cccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCC--ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCC
Q 002826 584 DEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFG--CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQ 661 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 661 (876)
+++....+.|+||.||+|.... .||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 35 ~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~ 112 (319)
T 2y4i_B 35 LEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCK 112 (319)
T ss_dssp EECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCC
T ss_pred eEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeeccc
Confidence 3444444555599999998743 49999986532 2234567889999999999999999999999999999999999
Q ss_pred CCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccc---cc
Q 002826 662 MGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAA---FQ 738 (876)
Q Consensus 662 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~---~~ 738 (876)
+++|.+++.+.+..+++..+..++.|++.|++|||+. +|+||||||+||+++ ++.+||+|||+++...... ..
T Consensus 113 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~ 188 (319)
T 2y4i_B 113 GRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRE 188 (319)
T ss_dssp SEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----------C
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccccccccc
Confidence 9999999987776799999999999999999999999 999999999999998 6799999999987654211 11
Q ss_pred cccccccccccccCccccCC---------CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccc
Q 002826 739 STMSSEYALSCYNAPEYGYS---------KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAI 809 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (876)
.......|++.|+|||.... ..++.++||||||+++|||++|+.||.....+.. ...+. .. ..
T Consensus 189 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~---~~---~~ 260 (319)
T 2y4i_B 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI--IWQMG---TG---MK 260 (319)
T ss_dssp CSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH--HHHHH---TT---CC
T ss_pred cccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHhc---cC---CC
Confidence 22334458899999998764 3578899999999999999999999986543321 11111 11 00
Q ss_pred cccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCccc
Q 002826 810 QVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTSLL 862 (876)
Q Consensus 810 ~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~~~ 862 (876)
....+. .....+.+++.+||+.||++|||+.|+++.|+++.++....
T Consensus 261 ~~~~~~------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~ 307 (319)
T 2y4i_B 261 PNLSQI------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRL 307 (319)
T ss_dssp CCCCCS------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-------
T ss_pred CCCCcC------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 000000 11234789999999999999999999999999998876554
No 240
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.1e-37 Score=343.97 Aligned_cols=237 Identities=19% Similarity=0.163 Sum_probs=180.7
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecC---CccCHHHHHHHH---HHHhhccCcccccee-------eEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNF---GCQSSKTLKTEV---KTLAKIRHKNIVKVL-------GFFH 648 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~~~-------~~~~ 648 (876)
|.....+|.|+ ||+||+|.. .+|+.||||++... .....+.+.+|+ +.++.++|||||+++ +++.
T Consensus 75 y~~~~~lG~G~-~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~ 153 (377)
T 3byv_A 75 LVRGTVLGQED-PYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 153 (377)
T ss_dssp EEEEEEEEEET-TEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEE
T ss_pred EEEcceeecCC-CEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhh
Confidence 33344555555 999999976 57999999999743 223346788999 455555899999998 6665
Q ss_pred eCC-----------------eEEEEEEcCCCCCHHHHhhccC------CcCCHHHHHHHHHHHHHHHHHhhccCCCCccc
Q 002826 649 SDE-----------------SIFLIYEFLQMGSLGDLICRQD------FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLH 705 (876)
Q Consensus 649 ~~~-----------------~~~lv~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H 705 (876)
+.+ ..|+||||+ +|+|.+++.+.+ ..+++..+.+++.|++.||+|||+. +|+|
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH 229 (377)
T 3byv_A 154 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVH 229 (377)
T ss_dssp CTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred ccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 543 289999999 579999997642 2234688889999999999999999 9999
Q ss_pred cccccCceeeCCCCCeEEccccchhhccccccccccccccccccccCccccCCC-----------CCCCccchHHHHHHH
Q 002826 706 RNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSK-----------KATAQMDAYSFGVVL 774 (876)
Q Consensus 706 ~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~SlGv~l 774 (876)
|||||+|||++.++.+||+|||+++..+.. .....| +.|+|||++.+. .++.++|||||||++
T Consensus 230 rDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGAR-----VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTCE-----EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCEEEEechhheecCCc-----ccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 999999999999999999999999864331 223446 889999998876 789999999999999
Q ss_pred HHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 775 LELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 775 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
|||++|+.||........ ..... + .....+..+.+++.+||+.||++|||+.|+++
T Consensus 304 ~elltg~~Pf~~~~~~~~---------------~~~~~-~----~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALGG---------------SEWIF-R----SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------CC---------------SGGGG-S----SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCcccccccc---------------hhhhh-h----hccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999999975432211 00000 0 00112346789999999999999999999986
No 241
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.1e-36 Score=335.77 Aligned_cols=264 Identities=17% Similarity=0.255 Sum_probs=199.7
Q ss_pred hhhhcccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCH-----------------HHHHHHHHHHhhccCccc
Q 002826 578 DLVIGMDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSS-----------------KTLKTEVKTLAKIRHKNI 640 (876)
Q Consensus 578 ~l~~~~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----------------~~~~~E~~~l~~l~h~ni 640 (876)
+...+.+.+....+.|+||.||+|.. +|+.||+|++........ +.+.+|++++++++||||
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 105 (348)
T 2pml_X 27 DKYINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC 105 (348)
T ss_dssp CEEETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred ccccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence 33333344444444555999999988 999999999965322111 789999999999999999
Q ss_pred cceeeEEEeCCeEEEEEEcCCCCCHHHH------hhcc-CCcCCHHHHHHHHHHHHHHHHHhhc-cCCCCccccccccCc
Q 002826 641 VKVLGFFHSDESIFLIYEFLQMGSLGDL------ICRQ-DFQLQWSIRLKIAIGVAQGLAYLHK-DYVPHLLHRNVKSKN 712 (876)
Q Consensus 641 v~~~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~Dlkp~N 712 (876)
+++++++.+.+..++||||+++++|.++ +.+. ...+++..+..++.|++.|++|||+ . +|+||||||+|
T Consensus 106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~N 182 (348)
T 2pml_X 106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSN 182 (348)
T ss_dssp CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGG
T ss_pred ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHh
Confidence 9999999999999999999999999998 6543 4679999999999999999999999 8 99999999999
Q ss_pred eeeCCCCCeEEccccchhhccccccccccccccccccccCccccCCC-CCCC-ccchHHHHHHHHHHHhCCCCCCCCCcc
Q 002826 713 ILLDADFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSK-KATA-QMDAYSFGVVLLELITGRQAEQAEPAE 790 (876)
Q Consensus 713 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~SlGv~l~elltg~~p~~~~~~~ 790 (876)
|+++.++.+||+|||.++..... ......|+..|+|||...+. .++. ++||||+|+++|||++|+.||......
T Consensus 183 il~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 258 (348)
T 2pml_X 183 ILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL 258 (348)
T ss_dssp EEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS
T ss_pred EEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH
Confidence 99999999999999999876443 23344589999999998876 5555 899999999999999999999875542
Q ss_pred hhhHHHHHHHHh-hcccccccccCh----hhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 791 SLDVVKWVRRKI-NITNGAIQVLDP----KIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 791 ~~~~~~~~~~~~-~~~~~~~~~~d~----~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
.. ....+.... ...........+ ............+.+++.+||+.||++|||+.|+++
T Consensus 259 ~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 259 VE-LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HH-HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HH-HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 21 122111110 000000000000 000011223456889999999999999999999987
No 242
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.6e-36 Score=324.98 Aligned_cols=242 Identities=20% Similarity=0.256 Sum_probs=191.7
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc--cCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC--QSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIY 657 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 657 (876)
+|.....+|.|+ ||+||+|... +++.||+|++..... .....+.+|+..+..+ +||||+++++++.+++..++||
T Consensus 12 ~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 12 EFHELEKIGSGE-FGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp HEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhhhhhhcCCC-ceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 444555566665 9999999765 899999999976432 2345778899999999 9999999999999999999999
Q ss_pred EcCCCCCHHHHhhcc---CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC-----------------
Q 002826 658 EFLQMGSLGDLICRQ---DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA----------------- 717 (876)
Q Consensus 658 e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~----------------- 717 (876)
||+++++|.+++.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~ 167 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------------------
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence 999999999999764 25689999999999999999999999 9999999999999984
Q ss_pred --CCCeEEccccchhhccccccccccccccccccccCccccCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhH
Q 002826 718 --DFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSK-KATAQMDAYSFGVVLLELITGRQAEQAEPAESLDV 794 (876)
Q Consensus 718 --~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~ 794 (876)
...+||+|||.++...... ...||+.|+|||.+.+. .++.++||||||+++|||++|.+|+.... .
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~- 236 (289)
T 1x8b_A 168 SNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD----Q- 236 (289)
T ss_dssp --CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH----H-
T ss_pred CCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh----H-
Confidence 4479999999988765432 23489999999998765 56689999999999999999998764321 1
Q ss_pred HHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 795 VKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
...... . ....+. ......+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~---~---~~~~~~-------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 WHEIRQ---G---RLPRIP-------QVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHHHHT---T---CCCCCS-------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHHHc---C---CCCCCC-------cccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 111111 0 111111 1123457899999999999999999999863
No 243
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.1e-36 Score=334.04 Aligned_cols=258 Identities=21% Similarity=0.264 Sum_probs=187.3
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeCC------e
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDE------S 652 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~ 652 (876)
.|.....+|.|+ ||.||+|.. .+++.||||++..... .....+.+|+.+++.++||||+++++++...+ .
T Consensus 26 ~y~~~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 26 RYQNLKPIGSGA-QGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred heeEeeeeEecC-CEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 444455565555 999999965 4799999999975322 22356789999999999999999999997654 7
Q ss_pred EEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhc
Q 002826 653 IFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIV 732 (876)
Q Consensus 653 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~ 732 (876)
.|+||||+++ +|.+.+.. .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp EEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred eEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 8999999986 78888753 588999999999999999999999 9999999999999999999999999999876
Q ss_pred cccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHH------------
Q 002826 733 GEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRR------------ 800 (876)
Q Consensus 733 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~------------ 800 (876)
.... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||........ .......
T Consensus 178 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 178 GTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHC-CCCCCHHHHTTS
T ss_pred cccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHHh
Confidence 5332 22334589999999999988899999999999999999999999987543221 1111000
Q ss_pred ------Hhhcccc-----cc----cccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 801 ------KINITNG-----AI----QVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 801 ------~~~~~~~-----~~----~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
....... .. ...-|............+.+++.+||+.||++|||++|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000000 00 000000001122335678999999999999999999999874
No 244
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.4e-36 Score=333.07 Aligned_cols=246 Identities=21% Similarity=0.318 Sum_probs=197.4
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc---cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC---QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
|.....+|.|| ||.||++... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus 43 y~~~~~lg~G~-~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 121 (335)
T 2owb_A 43 YVRGRFLGKGG-FAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 121 (335)
T ss_dssp EEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEeeCC-CeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEe
Confidence 33334455555 9999999765 688999999875422 234678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 122 ~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~- 196 (335)
T 2owb_A 122 LCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 196 (335)
T ss_dssp CCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred cCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc-
Confidence 999999999987653 689999999999999999999999 999999999999999999999999999987653221
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIAN 818 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 818 (876)
......||..|+|||.+.+..++.++||||||+++|||++|+.||........ ...... ..... .+
T Consensus 197 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~---~~~~~----~~---- 262 (335)
T 2owb_A 197 -RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET--YLRIKK---NEYSI----PK---- 262 (335)
T ss_dssp -CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHHH---TCCCC----CT----
T ss_pred -cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH--HHHHhc---CCCCC----Cc----
Confidence 12334589999999999888899999999999999999999999976543221 111111 11000 01
Q ss_pred hcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 819 CYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 819 ~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 263 ---~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 263 ---HINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 112357789999999999999999999973
No 245
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.5e-36 Score=335.67 Aligned_cols=259 Identities=19% Similarity=0.325 Sum_probs=180.3
Q ss_pred CCCCCCCCceEEEEEEeC---CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEe--CCeEEEEEEcCC
Q 002826 587 SSAGNGGPFGRVYILSLP---SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHS--DESIFLIYEFLQ 661 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~ 661 (876)
.+.+|.|+||+||+|+.. +++.||+|++... .....+.+|++++++++||||+++++++.. +...|+||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 434444559999999865 5889999998643 344678899999999999999999999965 678999999997
Q ss_pred CCCHHHHhhcc--------CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceee----CCCCCeEEccccch
Q 002826 662 MGSLGDLICRQ--------DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILL----DADFEPKLTDFALD 729 (876)
Q Consensus 662 ~gsL~~~l~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll----~~~~~~kl~DfGla 729 (876)
+ +|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp E-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred C-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 5 888877532 22489999999999999999999999 99999999999999 67799999999999
Q ss_pred hhcccccc-ccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcch-------hhHHHHHHH
Q 002826 730 RIVGEAAF-QSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAES-------LDVVKWVRR 800 (876)
Q Consensus 730 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~-------~~~~~~~~~ 800 (876)
+....... ........||+.|+|||++.+ ..++.++||||+||++|||++|++||.....+. .+....+..
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~ 259 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 259 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHH
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHH
Confidence 87753321 122344568999999999876 458999999999999999999999997654321 111111111
Q ss_pred Hhhcc-cccccccC--------------hhhhhh---------cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 801 KINIT-NGAIQVLD--------------PKIANC---------YQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 801 ~~~~~-~~~~~~~d--------------~~~~~~---------~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
..... ......+. ...... .......+.+++.+||+.||++|||+.|+++.
T Consensus 260 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 11100 00000000 000000 00013467899999999999999999999985
No 246
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.2e-36 Score=327.42 Aligned_cols=253 Identities=22% Similarity=0.353 Sum_probs=193.0
Q ss_pred hhhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc--------cCHHHHHHHHHHHhhccCccccceeeEEE
Q 002826 578 DLVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC--------QSSKTLKTEVKTLAKIRHKNIVKVLGFFH 648 (876)
Q Consensus 578 ~l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 648 (876)
.+...|.....+|.|+ ||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 7 ~l~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGA-CGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhceeEeeEEecCC-CEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 3444555555566655 9999999664 689999999864321 12245789999999999999999999987
Q ss_pred eCCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCC---eEEcc
Q 002826 649 SDESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFE---PKLTD 725 (876)
Q Consensus 649 ~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~---~kl~D 725 (876)
.++ .|+||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred CCc-eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 654 89999999999999998754 4789999999999999999999999 9999999999999987654 99999
Q ss_pred ccchhhccccccccccccccccccccCcccc---CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHh
Q 002826 726 FALDRIVGEAAFQSTMSSEYALSCYNAPEYG---YSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKI 802 (876)
Q Consensus 726 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 802 (876)
||+++....... .....||+.|+|||.+ ....++.++||||||+++|||++|+.||........ ....+...
T Consensus 161 fg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~- 235 (322)
T 2ycf_A 161 FGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQITSG- 235 (322)
T ss_dssp CTTCEECCCCHH---HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHHHHT-
T ss_pred Cccceecccccc---cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHHHhC-
Confidence 999987654321 2234589999999986 356688999999999999999999999976443322 22222111
Q ss_pred hcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 803 NITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 803 ~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
... ..+.. +......+.+++.+||+.||++|||+.|+++
T Consensus 236 -----~~~-~~~~~---~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 236 -----KYN-FIPEV---WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -----CCC-CCHHH---HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -----ccc-cCchh---hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 000 11111 1223456789999999999999999999985
No 247
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=6.1e-36 Score=338.61 Aligned_cols=197 Identities=24% Similarity=0.330 Sum_probs=166.2
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhc------cCccccceeeEEEeCCeEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKI------RHKNIVKVLGFFHSDESIF 654 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~~ 654 (876)
.|.....+|.|+ ||+||+|.. .+++.||||++... ......+.+|+.+++.+ +|+||+++++++...+..+
T Consensus 98 ry~~~~~LG~G~-fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 98 RYEVLKVIGKGS-FGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TEEEEEEEEESS-SEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred cEEEEEEcccCc-cEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 444445555555 999999965 46899999998643 23345677899988888 4679999999999999999
Q ss_pred EEEEcCCCCCHHHHhhccC-CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCC--eEEccccchhh
Q 002826 655 LIYEFLQMGSLGDLICRQD-FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFE--PKLTDFALDRI 731 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~--~kl~DfGla~~ 731 (876)
+||||++ ++|.+++.... ..+++..+.+++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 9999997 59999987653 4589999999999999999999999 9999999999999999887 99999999976
Q ss_pred ccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCc
Q 002826 732 VGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPA 789 (876)
Q Consensus 732 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~ 789 (876)
.... .....||+.|+|||++.+..++.++|||||||++|||++|++||.....
T Consensus 252 ~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 252 EHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp TTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 5432 2234589999999999888899999999999999999999999987544
No 248
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1e-36 Score=329.15 Aligned_cols=256 Identities=25% Similarity=0.324 Sum_probs=180.1
Q ss_pred ccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCC-ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcCCC
Q 002826 585 EKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFG-CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFLQM 662 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 662 (876)
....+|. |+||.||+|.. .+++.||+|++.... ....+++.+|++++++++||||+++++++...+..++||||+++
T Consensus 19 ~~~~lg~-G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (303)
T 2vwi_A 19 LQEVIGS-GATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97 (303)
T ss_dssp EEEECC----CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTT
T ss_pred hhheecc-ccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccC
Confidence 3344555 45999999975 478999999886433 23346788999999999999999999999999999999999999
Q ss_pred CCHHHHhhc-------cCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccc
Q 002826 663 GSLGDLICR-------QDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEA 735 (876)
Q Consensus 663 gsL~~~l~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 735 (876)
++|.+++.. ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 98 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 174 (303)
T 2vwi_A 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174 (303)
T ss_dssp CBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC--
T ss_pred CchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheeccC
Confidence 999999864 244689999999999999999999999 9999999999999999999999999999876532
Q ss_pred cc---ccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccc-c
Q 002826 736 AF---QSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAI-Q 810 (876)
Q Consensus 736 ~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 810 (876)
.. ........||+.|+|||...+ ..++.++||||||+++|||++|+.||.......... .. ......... .
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~---~~~~~~~~~~~ 250 (303)
T 2vwi_A 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM-LT---LQNDPPSLETG 250 (303)
T ss_dssp -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH-HH---HTSSCCCTTC-
T ss_pred CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH-HH---hccCCCccccc
Confidence 21 111233458999999998765 468899999999999999999999998755433211 11 111100000 0
Q ss_pred ccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 811 VLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 811 ~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
..++. ........+.+++.+||+.||++|||+.|+++.
T Consensus 251 ~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 251 VQDKE---MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp ----C---CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccch---hhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00111 111223467899999999999999999999873
No 249
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=324.36 Aligned_cols=248 Identities=17% Similarity=0.258 Sum_probs=191.4
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC----ccCHHHHHHHHHHHhhccCccccceeeEEE--eCCeEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG----CQSSKTLKTEVKTLAKIRHKNIVKVLGFFH--SDESIFL 655 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~l 655 (876)
|.....+|.| +||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++. +.+..++
T Consensus 7 y~i~~~lg~G-~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (305)
T 2wtk_C 7 YLMGDLLGEG-SYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM 85 (305)
T ss_dssp BCCCCEEEEC-SSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred eeEeeEEecC-CCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence 3344445554 49999999764 78999999996532 233567899999999999999999999984 4568999
Q ss_pred EEEcCCCCCHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccc
Q 002826 656 IYEFLQMGSLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGE 734 (876)
Q Consensus 656 v~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 734 (876)
||||++++ +.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 86 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 86 VMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp EEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 99999886 77776543 45799999999999999999999999 999999999999999999999999999987653
Q ss_pred cccccccccccccccccCccccCCCC--CCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccccc
Q 002826 735 AAFQSTMSSEYALSCYNAPEYGYSKK--ATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVL 812 (876)
Q Consensus 735 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (876)
...........||+.|+|||...+.. .+.++||||+|+++|||++|+.||....... ....+. ... .. +
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~i~---~~~---~~-~ 232 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK--LFENIG---KGS---YA-I 232 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHH---HCC---CC-C
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHHh---cCC---CC-C
Confidence 33223334456899999999887543 3779999999999999999999998644321 111111 111 00 0
Q ss_pred ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 813 DPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 813 d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
. ......+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~-------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 233 P-------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp C-------SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred C-------CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 1123357899999999999999999999974
No 250
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4.2e-35 Score=323.09 Aligned_cols=306 Identities=20% Similarity=0.301 Sum_probs=162.8
Q ss_pred ccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcC
Q 002826 95 VCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVP 174 (876)
Q Consensus 95 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 174 (876)
+.++++|++|++++|.+... | .+..+++|++|+|++|. +++. |. +..+++|++|+|++|++++.
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~----------i~~~-~~-~~~l~~L~~L~L~~n~i~~~-- 103 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQ----------ITDI-SP-LSNLVKLTNLYIGTNKITDI-- 103 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSC----------CCCC-GG-GTTCTTCCEEECCSSCCCCC--
T ss_pred chhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCc----------cccc-hh-hhcCCcCCEEEccCCcccCc--
Confidence 34566777777777766553 2 26666666655444433 3322 22 66666666666666666532
Q ss_pred ccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCcccccc
Q 002826 175 FVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSL 254 (876)
Q Consensus 175 ~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l 254 (876)
..|.++++|++|+|++|+ +..+|. +..+++|++|++++|...... ..+..+++|++|++++|.++ .++. +..+
T Consensus 104 ~~~~~l~~L~~L~l~~n~--i~~~~~-~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~-~~~~--~~~l 176 (347)
T 4fmz_A 104 SALQNLTNLRELYLNEDN--ISDISP-LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVK-DVTP--IANL 176 (347)
T ss_dssp GGGTTCTTCSEEECTTSC--CCCCGG-GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCC-CCGG--GGGC
T ss_pred hHHcCCCcCCEEECcCCc--ccCchh-hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcC-Cchh--hccC
Confidence 246666666666666665 334433 555555555555555433322 22555555555555555555 2322 2335
Q ss_pred ccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEe
Q 002826 255 LKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRA 334 (876)
Q Consensus 255 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 334 (876)
++|++|++++|++++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++
T Consensus 177 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--------------------------~~~~~~L~~L~l 228 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--------------------------VANMTRLNSLKI 228 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--------------------------GGGCTTCCEEEC
T ss_pred CCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--------------------------hhcCCcCCEEEc
Confidence 555555555555543222 4444444444444444443222 344444444444
Q ss_pred cCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccC
Q 002826 335 ESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQ 414 (876)
Q Consensus 335 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~ 414 (876)
++|++++..+ +..+++|++|++++|++++. ..+..+++|+.|++++|.+++. +.+..+++|+.|++++|++++.
T Consensus 229 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~ 302 (347)
T 4fmz_A 229 GNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNE 302 (347)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGG
T ss_pred cCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCc
Confidence 4444443322 44445555555555555432 2345555555555555555543 2355566666666666666655
Q ss_pred Cc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCccc
Q 002826 415 IP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLT 459 (876)
Q Consensus 415 ~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 459 (876)
.+ .+..+++|++|+|++|++++..| +..+++|++||+++|.|+
T Consensus 303 ~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 303 DMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 54 46666777777777777765544 666777777777777664
No 251
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5e-36 Score=321.56 Aligned_cols=248 Identities=20% Similarity=0.297 Sum_probs=180.3
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccC--HHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEc
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQS--SKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 659 (876)
|.....+|.|| ||+||+|.. .+|+.||+|++....... .+.+.++...++.++||||+++++++.+++..++||||
T Consensus 9 y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~ 87 (290)
T 3fme_A 9 LEPIMELGRGA-YGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL 87 (290)
T ss_dssp EEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEEC
T ss_pred hhhHHhcCCCC-CeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEeh
Confidence 33445555555 999999976 589999999996542211 22344555568888999999999999999999999999
Q ss_pred CCCCCHHHHhhc---cCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccc
Q 002826 660 LQMGSLGDLICR---QDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 660 ~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 736 (876)
+++ +|.+++.. .+..+++..+..++.|++.|++|||+. .+|+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 164 (290)
T 3fme_A 88 MDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164 (290)
T ss_dssp CSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred hcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence 985 88887754 356799999999999999999999985 289999999999999999999999999998765432
Q ss_pred cccccccccccccccCcccc----CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccccc
Q 002826 737 FQSTMSSEYALSCYNAPEYG----YSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVL 812 (876)
Q Consensus 737 ~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (876)
. .....||+.|+|||.+ ....++.++||||+|+++|||++|+.||................. . ....
T Consensus 165 ~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~---~~~~ 235 (290)
T 3fme_A 165 A---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP---S---PQLP 235 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC---C---CCCC
T ss_pred c---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccC---C---CCcc
Confidence 2 2233589999999995 556788999999999999999999999986444333222221111 0 0000
Q ss_pred ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 813 DPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 813 d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
. ......+.+++.+||+.||++|||+.|+++
T Consensus 236 ~-------~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 A-------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp T-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred c-------ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0 112345789999999999999999999987
No 252
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4e-36 Score=332.88 Aligned_cols=256 Identities=23% Similarity=0.343 Sum_probs=179.2
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhccCccccceeeEEEeC------Ce
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSD------ES 652 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 652 (876)
.|.....+|.|+ ||.||+|.. .+|+.||||++..... .....+.+|+++++.++||||+++++++... ..
T Consensus 30 ~y~~~~~lG~G~-~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 30 RYQNLSPVGSGA-YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TEEEEEECC-----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEeeEEeecC-CeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 444445555555 999999964 5799999999865322 2345778999999999999999999998654 56
Q ss_pred EEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhc
Q 002826 653 IFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIV 732 (876)
Q Consensus 653 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~ 732 (876)
.|+|+||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 109 ~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred EEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 89999998 6799998865 4699999999999999999999999 9999999999999999999999999999875
Q ss_pred cccccccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcc-ccc--
Q 002826 733 GEAAFQSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINIT-NGA-- 808 (876)
Q Consensus 733 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~-- 808 (876)
... .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||....... ....+....... ...
T Consensus 183 ~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 183 ADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID--QLKLILRLVGTPGAELLK 255 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHT
T ss_pred ccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHH
Confidence 432 233458999999999876 678999999999999999999999998654322 111111111000 000
Q ss_pred --------------ccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 809 --------------IQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 809 --------------~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.......+..........+.+++.+||+.||++|||+.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000001111112224568899999999999999999999874
No 253
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=9.4e-37 Score=339.35 Aligned_cols=251 Identities=13% Similarity=0.069 Sum_probs=177.2
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc---cCHHHHHHHHHHHhhc--cCcccccee-------eEEEe
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC---QSSKTLKTEVKTLAKI--RHKNIVKVL-------GFFHS 649 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~~~-------~~~~~ 649 (876)
|.....+|.|| ||+||+|... +|+.||+|++..... ...+.+.+|+.+++.+ +||||++++ +++..
T Consensus 64 y~~~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~ 142 (371)
T 3q60_A 64 LKLVEPLRVGD-RSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV 142 (371)
T ss_dssp EEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred eeeeeeccCCC-CEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence 44445566655 9999999764 899999999987543 2235677886555555 599988755 45443
Q ss_pred C-----------------CeEEEEEEcCCCCCHHHHhhccCCcCCHHHH------HHHHHHHHHHHHHhhccCCCCcccc
Q 002826 650 D-----------------ESIFLIYEFLQMGSLGDLICRQDFQLQWSIR------LKIAIGVAQGLAYLHKDYVPHLLHR 706 (876)
Q Consensus 650 ~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~~i~H~ 706 (876)
. ...|+||||++ |+|.+++...+..+++..+ ..++.|++.||+|||+. +|+||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHr 218 (371)
T 3q60_A 143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHG 218 (371)
T ss_dssp TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccC
Confidence 3 33899999999 7999999875445566666 78889999999999999 99999
Q ss_pred ccccCceeeCCCCCeEEccccchhhccccccccccccccccccccCccccCC--CCCCCccchHHHHHHHHHHHhCCCCC
Q 002826 707 NVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYS--KKATAQMDAYSFGVVLLELITGRQAE 784 (876)
Q Consensus 707 Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlGv~l~elltg~~p~ 784 (876)
||||+|||++.++.+||+|||+++..+... ....+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999998765322 13346689999999887 67899999999999999999999999
Q ss_pred CCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 785 QAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
.......... +..... ..........+. ....+..+.+++.+||+.||++|||+.|+++
T Consensus 294 ~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 294 GLVTPGIKGS--WKRPSL-RVPGTDSLAFGS----CTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TBCCTTCTTC--CCBCCT-TSCCCCSCCCTT----SSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCcCcccccc--hhhhhh-hhccccccchhh----ccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 8754322100 000000 000000000111 1122446789999999999999999999975
No 254
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.2e-36 Score=332.77 Aligned_cols=255 Identities=20% Similarity=0.266 Sum_probs=189.0
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeC-----------
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSD----------- 650 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----------- 650 (876)
|.....+|.| +||+||+|.. .+|+.||+|++.... ....+|+++++.++||||+++++++...
T Consensus 9 y~~~~~lG~G-~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 9 YSLGKTLGTG-SFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp EEEEEEEECC--CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred EEEEEEEEec-cCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence 3334445554 5999999965 589999999986542 2234799999999999999999998543
Q ss_pred ---------------------------CeEEEEEEcCCCCCHHHHhhc---cCCcCCHHHHHHHHHHHHHHHHHhhccCC
Q 002826 651 ---------------------------ESIFLIYEFLQMGSLGDLICR---QDFQLQWSIRLKIAIGVAQGLAYLHKDYV 700 (876)
Q Consensus 651 ---------------------------~~~~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 700 (876)
...++||||+++ +|.+.+.. .+..+++..+..++.|++.||+|||+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 160 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL-- 160 (383)
T ss_dssp --------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT--
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 348899999985 88777753 356799999999999999999999999
Q ss_pred CCccccccccCceeeC-CCCCeEEccccchhhccccccccccccccccccccCccccCCC-CCCCccchHHHHHHHHHHH
Q 002826 701 PHLLHRNVKSKNILLD-ADFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSK-KATAQMDAYSFGVVLLELI 778 (876)
Q Consensus 701 ~~i~H~Dlkp~NIll~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGv~l~ell 778 (876)
+|+||||||+||+++ .++.+||+|||+++...... ......+|+.|+|||.+.+. .++.++||||+||++|||+
T Consensus 161 -gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 236 (383)
T 3eb0_A 161 -GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236 (383)
T ss_dssp -TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred -cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence 999999999999997 68899999999998765432 22334578999999988764 4899999999999999999
Q ss_pred hCCCCCCCCCcchhhHHHHHHHHhhcc--------cccc-----cccChhhh-hhcHHHHHHHHHHHHHccCCCCCCCCC
Q 002826 779 TGRQAEQAEPAESLDVVKWVRRKINIT--------NGAI-----QVLDPKIA-NCYQQQMLGALEIALRCTSVMPEKRPS 844 (876)
Q Consensus 779 tg~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~-----~~~d~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs 844 (876)
+|++||......+ .....+....... .... ......+. ......+..+.+++.+||+.||++|||
T Consensus 237 ~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 315 (383)
T 3eb0_A 237 LGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRIN 315 (383)
T ss_dssp HSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred hCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCC
Confidence 9999998754332 2222221110000 0000 00000111 111123456889999999999999999
Q ss_pred HHHHHH
Q 002826 845 MFEVVK 850 (876)
Q Consensus 845 ~~ell~ 850 (876)
+.|+++
T Consensus 316 ~~e~l~ 321 (383)
T 3eb0_A 316 PYEAMA 321 (383)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999985
No 255
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.5e-35 Score=317.51 Aligned_cols=253 Identities=23% Similarity=0.296 Sum_probs=198.6
Q ss_pred hhhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc---------cCHHHHHHHHHHHhhcc-CccccceeeE
Q 002826 578 DLVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC---------QSSKTLKTEVKTLAKIR-HKNIVKVLGF 646 (876)
Q Consensus 578 ~l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~~~~~ 646 (876)
.+..+|.....+|.|+ ||.||+|... +|+.||+|++..... ...+.+.+|++++++++ ||||++++++
T Consensus 14 ~~~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (298)
T 1phk_A 14 GFYENYEPKEILGRGV-SSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 92 (298)
T ss_dssp -CTTTEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred chhhccceeeeecCCC-ceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence 3334555555566655 9999999765 789999999975431 11346778999999995 9999999999
Q ss_pred EEeCCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccc
Q 002826 647 FHSDESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDF 726 (876)
Q Consensus 647 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~Df 726 (876)
+.+++..++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+||
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 93 YETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred eccCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 99999999999999999999999765 3689999999999999999999999 9999999999999999999999999
Q ss_pred cchhhccccccccccccccccccccCccccC------CCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHH
Q 002826 727 ALDRIVGEAAFQSTMSSEYALSCYNAPEYGY------SKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRR 800 (876)
Q Consensus 727 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 800 (876)
|+++...... ......|++.|+|||.+. ...++.++||||||+++|||++|+.||....... .......
T Consensus 169 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~ 243 (298)
T 1phk_A 169 GFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML--MLRMIMS 243 (298)
T ss_dssp TTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH
T ss_pred cchhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH--HHHHHhc
Confidence 9998765432 223345899999999864 4567889999999999999999999997643322 1111111
Q ss_pred HhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 801 KINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 801 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
. ......+.. ...+..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~------~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 244 G------NYQFGSPEW----DDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp T------CCCCCTTTG----GGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred C------CcccCcccc----cccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1 011111111 122346789999999999999999999986
No 256
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6.9e-36 Score=328.39 Aligned_cols=248 Identities=21% Similarity=0.319 Sum_probs=191.2
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc-cCHHHHHHHHHH-HhhccCccccceeeEEEeCCeEEEEEEc
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC-QSSKTLKTEVKT-LAKIRHKNIVKVLGFFHSDESIFLIYEF 659 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~ 659 (876)
|.....+|.|+ ||+||+|.. .+|+.||||++..... ....++..|... ++.++||||+++++++.+++..++||||
T Consensus 53 ~~~~~~lG~G~-~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~ 131 (340)
T 3an0_A 53 LEPIMELGRGA-YGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL 131 (340)
T ss_dssp EEEEEEEEECS-SEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECC
T ss_pred eeEeeEecccC-CEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHH
Confidence 33344555555 999999976 5899999999965432 223445555555 7778999999999999999999999999
Q ss_pred CCCCCHHHHhhc---cCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccc
Q 002826 660 LQMGSLGDLICR---QDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 660 ~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 736 (876)
+++ +|.+++.. ....+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||+++......
T Consensus 132 ~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 208 (340)
T 3an0_A 132 MDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV 208 (340)
T ss_dssp CSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHH
T ss_pred hhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceeccccc
Confidence 986 99888864 356799999999999999999999974 289999999999999999999999999998775432
Q ss_pred cccccccccccccccCccccC----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccccc
Q 002826 737 FQSTMSSEYALSCYNAPEYGY----SKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVL 812 (876)
Q Consensus 737 ~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (876)
. .....||+.|+|||.+. ...++.++|||||||++|||++|+.||................ .. ...
T Consensus 209 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~---~~----~~~ 278 (340)
T 3an0_A 209 A---KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE---PS----PQL 278 (340)
T ss_dssp H---HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHS---CC----CCC
T ss_pred c---cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcC---CC----CCC
Confidence 1 22335899999999864 3468899999999999999999999998644332222221111 00 000
Q ss_pred ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 813 DPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 813 d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
.+ ......+.+++.+||+.||++|||+.|+++
T Consensus 279 ~~------~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 279 PA------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CG------GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred Cc------ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 00 112346789999999999999999999987
No 257
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-35 Score=329.15 Aligned_cols=262 Identities=21% Similarity=0.309 Sum_probs=196.3
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeC-----CeEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSD-----ESIF 654 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 654 (876)
.|.....+|.|| ||.||+|.. .+++.||+|++..... .....+.+|++++++++||||+++++++... ...|
T Consensus 28 ~y~~~~~lG~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 28 RYTNLSYIGEGA-YGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred cEEEEEEeecCC-CeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 444445555555 999999965 4789999999975332 2236788999999999999999999999764 4689
Q ss_pred EEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccc
Q 002826 655 LIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGE 734 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 734 (876)
+||||+++ +|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 107 iv~e~~~~-~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 107 IVQDLMET-DLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp EEEECCSE-EHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEcccCc-CHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 99999985 999998654 589999999999999999999999 999999999999999999999999999987654
Q ss_pred cccc-cccccccccccccCccccC-CCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccc-ccccc
Q 002826 735 AAFQ-STMSSEYALSCYNAPEYGY-SKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITN-GAIQV 811 (876)
Q Consensus 735 ~~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 811 (876)
.... .......||+.|+|||.+. ...++.++||||+||++|||++|++||........ ............. .....
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGILGSPSQEDLNCI 259 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH-HHHHHHHHCSCCHHHHHTC
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHHh
Confidence 3221 2234456899999999765 44589999999999999999999999987554332 1111110000000 00000
Q ss_pred c---------------ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 812 L---------------DPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 812 ~---------------d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
. ..............+.+++.+|++.||++|||+.|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 000111112234568899999999999999999999873
No 258
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.8e-35 Score=349.95 Aligned_cols=306 Identities=18% Similarity=0.179 Sum_probs=196.0
Q ss_pred eecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCC
Q 002826 138 LDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSG 217 (876)
Q Consensus 138 LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~ 217 (876)
|++++|.+....+..|..+++|++|+|++|.+++..|..|+++++|++|+|++| .
T Consensus 56 l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-------------------------~ 110 (597)
T 3oja_B 56 VTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFN-------------------------A 110 (597)
T ss_dssp EEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSS-------------------------C
T ss_pred EEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCC-------------------------c
Confidence 344444554444444555555666666666555555555555555555555555 4
Q ss_pred CcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCC
Q 002826 218 FHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPG 297 (876)
Q Consensus 218 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 297 (876)
+++..|..|.++++|++|+|++|.|+ .+|..++..+++|++|+|++|++++..|..|..+++|++|+|++|.+++.
T Consensus 111 l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--- 186 (597)
T 3oja_B 111 IRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV--- 186 (597)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---
T ss_pred CCCCCHHHHcCCCCCCEEEeeCCCCC-CCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---
Confidence 55555555556666666666666665 55555545566666666666666655555566666666666666666543
Q ss_pred CCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCc
Q 002826 298 SINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSL 377 (876)
Q Consensus 298 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 377 (876)
.+..+++|+.|++++|.+++ +...++|+.|++++|.++...+.. .++|+.|+|++|.+++ +..+..+++|
T Consensus 187 ~~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L 256 (597)
T 3oja_B 187 DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGL 256 (597)
T ss_dssp CGGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTC
T ss_pred ChhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCC
Confidence 24445566666666666653 233456777777777776544332 2578888888888875 3667778888
Q ss_pred cEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCc
Q 002826 378 YRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNN 457 (876)
Q Consensus 378 ~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 457 (876)
+.|++++|.+++..|..|..+++|+.|+|++|.+++.+..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.
T Consensus 257 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~ 335 (597)
T 3oja_B 257 VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNS 335 (597)
T ss_dssp SEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSC
T ss_pred CEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCC
Confidence 8888888888877777788888888888888888776556666777777777777777 566667777777777777777
Q ss_pred ccccCCCcccccccceEEccCCccccccCCcccCCCCCccccCCCCCCCC
Q 002826 458 LTGPIPQGLQNLKLALFNVSFNKLSGRVPYSLISGLPASYLQGNPGLCGP 507 (876)
Q Consensus 458 l~~~~p~~~~~l~l~~l~ls~N~l~~~~p~~~~~~~~~~~~~~N~~~C~~ 507 (876)
|++. |...+.++..+.+.+|||.|++
T Consensus 336 l~~~------------------------~~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 336 IVTL------------------------KLSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp CCCC------------------------CCCTTCCCSEEECCSSCEEHHH
T ss_pred CCCc------------------------ChhhcCCCCEEEeeCCCCCChh
Confidence 7643 2222345566788888888865
No 259
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.7e-35 Score=321.60 Aligned_cols=268 Identities=19% Similarity=0.287 Sum_probs=199.5
Q ss_pred ccccCCCCCCCCceEEEEEEe--CCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhc---cCccccceeeEEE-----eC
Q 002826 583 MDEKSSAGNGGPFGRVYILSL--PSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKI---RHKNIVKVLGFFH-----SD 650 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~-----~~ 650 (876)
|.....+|.|+ ||.||+|.. .+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++. ..
T Consensus 13 y~~~~~lg~G~-~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 91 (326)
T 1blx_A 13 YECVAEIGEGA-YGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 91 (326)
T ss_dssp EEEEEEEEEET-TEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred eeeeeeecccc-cEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence 44445555555 999999976 4688999999864322 2234677888888777 7999999999987 45
Q ss_pred CeEEEEEEcCCCCCHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccch
Q 002826 651 ESIFLIYEFLQMGSLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALD 729 (876)
Q Consensus 651 ~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla 729 (876)
...++||||++ |+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 92 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~ 167 (326)
T 1blx_A 92 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA 167 (326)
T ss_dssp EEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred ceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCccc
Confidence 67999999998 5999999765 34589999999999999999999999 9999999999999999999999999999
Q ss_pred hhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhh-ccccc
Q 002826 730 RIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKIN-ITNGA 808 (876)
Q Consensus 730 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~ 808 (876)
+...... ......||..|+|||...+..++.++||||||+++|||++|+.||........ .......... .....
T Consensus 168 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~ 243 (326)
T 1blx_A 168 RIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILDVIGLPGEEDW 243 (326)
T ss_dssp CCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCGGGS
T ss_pred ccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHcCCCCcccC
Confidence 8765322 23345589999999999888899999999999999999999999986543221 1111111100 00000
Q ss_pred c-----------cccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhhcccCC
Q 002826 809 I-----------QVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA--LHSLSTRT 859 (876)
Q Consensus 809 ~-----------~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~--L~~i~~~~ 859 (876)
. .................+.+++.+||+.||++|||+.|+++. ++++....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~ 307 (326)
T 1blx_A 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCK 307 (326)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCCC
T ss_pred ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccchhh
Confidence 0 000011112222334567899999999999999999999953 55554433
No 260
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.4e-35 Score=320.06 Aligned_cols=251 Identities=23% Similarity=0.364 Sum_probs=188.6
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEe-----------
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHS----------- 649 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----------- 649 (876)
+|.....+|.|+ ||.||+|+. .+|+.||+|++... ....+.+.+|++++++++||||+++++++.+
T Consensus 7 ~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 7 DFEEIAVLGQGA-FGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cchhhheeccCC-cEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 454555566665 999999976 48999999998643 2334678899999999999999999998865
Q ss_pred --CCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEcccc
Q 002826 650 --DESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFA 727 (876)
Q Consensus 650 --~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfG 727 (876)
.+..++||||+++++|.+++......+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.+||+|||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeCc
Confidence 3568999999999999999987777789999999999999999999999 99999999999999999999999999
Q ss_pred chhhcccccc------------ccccccccccccccCccccCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhH
Q 002826 728 LDRIVGEAAF------------QSTMSSEYALSCYNAPEYGYSK-KATAQMDAYSFGVVLLELITGRQAEQAEPAESLDV 794 (876)
Q Consensus 728 la~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~ 794 (876)
+++....... ........||+.|+|||.+.+. .++.++||||+|+++|||++ ||.... +.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-~~--- 234 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-ER--- 234 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-HH---
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-hH---
Confidence 9987642210 1122344588999999998754 68999999999999999998 443211 11
Q ss_pred HHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 795 VKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
........... ..+.+. ........+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 VNILKKLRSVS----IEFPPD---FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHSTT----CCCCTT---CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHhccccc----cccCcc---ccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 11111111111 011111 112233457899999999999999999999974
No 261
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6.9e-36 Score=355.77 Aligned_cols=246 Identities=20% Similarity=0.260 Sum_probs=198.1
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecC---CccCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNF---GCQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 656 (876)
+|.....+|.|+ ||.||+|+.. +++.||||++.+. .....+.+..|..++..+ +||+|+++++++.+.+..|+|
T Consensus 342 ~f~~~~~LG~G~-fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 342 DFNFLMVLGKGS-FGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp TEEEEEESSBTT-TBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred ceEEEEEEccCC-CEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 344445566655 9999999764 7899999999753 224456778899999988 799999999999999999999
Q ss_pred EEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccc
Q 002826 657 YEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 657 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 736 (876)
|||+++|+|.+++.+.+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 421 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 496 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 496 (674)
T ss_dssp EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred EeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence 99999999999998754 699999999999999999999999 99999999999999999999999999998643222
Q ss_pred cccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhh
Q 002826 737 FQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKI 816 (876)
Q Consensus 737 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 816 (876)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+.........
T Consensus 497 --~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~-----~~~~i~~~~~~~-------- 561 (674)
T 3pfq_A 497 --VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-----LFQSIMEHNVAY-------- 561 (674)
T ss_dssp --CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHHHHHSSCCCC--------
T ss_pred --cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH-----HHHHHHhCCCCC--------
Confidence 12334569999999999999999999999999999999999999998754332 111111111001
Q ss_pred hhhcHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 002826 817 ANCYQQQMLGALEIALRCTSVMPEKRPSM-----FEVVK 850 (876)
Q Consensus 817 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~-----~ell~ 850 (876)
+.....++.+++.+||+.||++||++ +||++
T Consensus 562 ---p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 562 ---PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ---CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ---CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 11223467899999999999999997 66664
No 262
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.5e-35 Score=321.71 Aligned_cols=250 Identities=16% Similarity=0.211 Sum_probs=188.4
Q ss_pred ccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCc--cCHHHHHHHHHHHhhcc--CccccceeeEEEeCCeEEEEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGC--QSSKTLKTEVKTLAKIR--HKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e 658 (876)
|.....+|. |+||.||+|...+++.||+|++..... ...+.+.+|++++++++ ||||+++++++.+++..++|||
T Consensus 30 y~~~~~lg~-G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e 108 (313)
T 3cek_A 30 YSILKQIGS-GGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 108 (313)
T ss_dssp EEEEEEEEC-CSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEEecC-CCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe
Confidence 333444555 459999999888899999999965432 23467889999999997 5999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
+.+++|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||++++ +.+||+|||+++........
T Consensus 109 -~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 109 -CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp -CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred -cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 56789999997654 789999999999999999999999 9999999999999964 89999999999877543322
Q ss_pred cccccccccccccCccccCC-----------CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccc
Q 002826 739 STMSSEYALSCYNAPEYGYS-----------KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNG 807 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 807 (876)
.......|++.|+|||.... ..++.++||||||+++|||++|+.||............. ....
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~----~~~~-- 256 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI----IDPN-- 256 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH----HCTT--
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHH----Hhcc--
Confidence 22334568999999998765 467889999999999999999999997644322211111 1100
Q ss_pred cccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002826 808 AIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKAL 852 (876)
Q Consensus 808 ~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L 852 (876)
.. ..... .....+.+++.+||+.||++|||+.|+++.-
T Consensus 257 ~~----~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 257 HE----IEFPD---IPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp SC----CCCCC---CSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cc----cCCcc---cchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 00 00001 1123578999999999999999999999753
No 263
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.3e-35 Score=323.82 Aligned_cols=264 Identities=21% Similarity=0.305 Sum_probs=200.1
Q ss_pred hhhhhhcccccCCCCCCCCceEEEEEEe--CCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCcc------ccceeeEE
Q 002826 576 EHDLVIGMDEKSSAGNGGPFGRVYILSL--PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKN------IVKVLGFF 647 (876)
Q Consensus 576 ~~~l~~~~~~~~~~g~~g~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~ 647 (876)
.++...+.|++.+..|.|+||+||+|.. .+++.||+|++.... ...+.+.+|+++++.++|++ ++++++++
T Consensus 8 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~ 86 (339)
T 1z57_A 8 SGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF 86 (339)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE
T ss_pred cCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc
Confidence 3444444444444445555999999965 378999999986432 33467889999999998765 99999999
Q ss_pred EeCCeEEEEEEcCCCCCHHHHhhccC-CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC---------
Q 002826 648 HSDESIFLIYEFLQMGSLGDLICRQD-FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA--------- 717 (876)
Q Consensus 648 ~~~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~--------- 717 (876)
.+.+..++||||+ +++|.+++.+.+ ..+++..+.+++.|++.||+|||+. +|+||||||+||+++.
T Consensus 87 ~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 87 EHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC-
T ss_pred ccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCC
Confidence 9999999999999 789999997663 4689999999999999999999999 9999999999999987
Q ss_pred ----------CCCeEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 002826 718 ----------DFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAE 787 (876)
Q Consensus 718 ----------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~ 787 (876)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||...
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 678999999999765432 22345899999999999888999999999999999999999999865
Q ss_pred CcchhhHHHHHHHHh-hccccccc------c---------------------cCh--hhhhhcHHHHHHHHHHHHHccCC
Q 002826 788 PAESLDVVKWVRRKI-NITNGAIQ------V---------------------LDP--KIANCYQQQMLGALEIALRCTSV 837 (876)
Q Consensus 788 ~~~~~~~~~~~~~~~-~~~~~~~~------~---------------------~d~--~~~~~~~~~~~~~~~li~~cl~~ 837 (876)
.... ....+.... ..+..... . ..+ ........+...+.+++.+||+.
T Consensus 238 ~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 315 (339)
T 1z57_A 238 DSKE--HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEY 315 (339)
T ss_dssp CHHH--HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred ChHH--HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCc
Confidence 4332 112111111 00000000 0 000 00011223456789999999999
Q ss_pred CCCCCCCHHHHHHH
Q 002826 838 MPEKRPSMFEVVKA 851 (876)
Q Consensus 838 dP~~RPs~~ell~~ 851 (876)
||++|||+.|+++.
T Consensus 316 dP~~Rpt~~ell~h 329 (339)
T 1z57_A 316 DPAKRITLREALKH 329 (339)
T ss_dssp STTTSCCHHHHTTS
T ss_pred CcccccCHHHHhcC
Confidence 99999999999864
No 264
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.7e-36 Score=358.15 Aligned_cols=255 Identities=22% Similarity=0.346 Sum_probs=198.9
Q ss_pred cccCCCCCCCCceEEEEEEeC----CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 584 DEKSSAGNGGPFGRVYILSLP----SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
++..+..|.|+||.||+|... .+..||+|++..... ...+.+.+|+.++++++||||+++++++. ++..++|||
T Consensus 392 y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E 470 (656)
T 2j0j_A 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIME 470 (656)
T ss_dssp EEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred EEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEE
Confidence 334444444559999999764 356799999865322 22367889999999999999999999985 456899999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
|+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 471 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 547 (656)
T 2j0j_A 471 LCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 547 (656)
T ss_dssp CCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----
T ss_pred cCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCCcce
Confidence 9999999999987766799999999999999999999999 9999999999999999999999999999877543321
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhh
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIA 817 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 817 (876)
......+|+.|+|||.+....++.++||||||+++|||++ |..||....... ....+...... ...
T Consensus 548 -~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~~~i~~~~~~------~~~---- 614 (656)
T 2j0j_A 548 -KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGERL------PMP---- 614 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHHTCCC------CCC----
T ss_pred -eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHcCCCC------CCC----
Confidence 2233446788999999988889999999999999999997 999998654332 22222211100 011
Q ss_pred hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccC
Q 002826 818 NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTR 858 (876)
Q Consensus 818 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~ 858 (876)
...+..+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 615 ---~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 615 ---PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 11234678999999999999999999999999998643
No 265
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.6e-35 Score=326.46 Aligned_cols=265 Identities=20% Similarity=0.291 Sum_probs=187.2
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCe-------E
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDES-------I 653 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-------~ 653 (876)
+|.....+|. |+||+||+|... +|+.||||++.... .......+|++.++.++||||+++++++...+. .
T Consensus 24 ~y~~~~~lg~-G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 101 (360)
T 3e3p_A 24 RFQVERMAGQ-GTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYL 101 (360)
T ss_dssp TEEEC-----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred ceEEEEEEec-CCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeE
Confidence 3444444554 559999999764 79999999986543 334566778888999999999999999976443 8
Q ss_pred EEEEEcCCCCCHHHHhh---ccCCcCCHHHHHHHHHHHHHHHHHhh--ccCCCCccccccccCceeeCC-CCCeEEcccc
Q 002826 654 FLIYEFLQMGSLGDLIC---RQDFQLQWSIRLKIAIGVAQGLAYLH--KDYVPHLLHRNVKSKNILLDA-DFEPKLTDFA 727 (876)
Q Consensus 654 ~lv~e~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~~~i~H~Dlkp~NIll~~-~~~~kl~DfG 727 (876)
++||||+++ ++.+.+. .....+++..+..++.|++.|+.||| +. +|+||||||+||+++. ++.+||+|||
T Consensus 102 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg 177 (360)
T 3e3p_A 102 NVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFG 177 (360)
T ss_dssp EEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred EEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence 899999987 5554443 23457899999999999999999999 77 9999999999999996 8999999999
Q ss_pred chhhccccccccccccccccccccCccccCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccc
Q 002826 728 LDRIVGEAAFQSTMSSEYALSCYNAPEYGYSK-KATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITN 806 (876)
Q Consensus 728 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 806 (876)
+++....... .....||+.|+|||.+.+. .++.++|||||||++|||++|+.||........ .....+.......
T Consensus 178 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~~~ 253 (360)
T 3e3p_A 178 SAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ-LHEIVRVLGCPSR 253 (360)
T ss_dssp TCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCH
T ss_pred CceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH-HHHHHHHcCCCCH
Confidence 9987654332 2334589999999988654 489999999999999999999999987543321 2222221100000
Q ss_pred ccccccCh-----------------hhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhcc
Q 002826 807 GAIQVLDP-----------------KIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA--LHSLS 856 (876)
Q Consensus 807 ~~~~~~d~-----------------~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~--L~~i~ 856 (876)
.....+++ .+..........+.+++.+||+.||++|||+.|+++. ++++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp HHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred HHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 00000000 0001111235678999999999999999999999974 44443
No 266
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=324.32 Aligned_cols=247 Identities=24% Similarity=0.350 Sum_probs=189.0
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhc-cCccccceeeEEEe------CCeEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHS------DESIF 654 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~------~~~~~ 654 (876)
|.....+|.|+ ||.||+|.. .+|+.||+|++.... .....+.+|+.+++++ +||||+++++++.. .+..+
T Consensus 26 y~~~~~lg~G~-~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~ 103 (326)
T 2x7f_A 26 FELVELVGNGT-YGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 103 (326)
T ss_dssp EEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred EEEEEEeccCC-CEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence 33444455555 999999976 479999999987543 4567889999999999 79999999999987 46899
Q ss_pred EEEEcCCCCCHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcc
Q 002826 655 LIYEFLQMGSLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVG 733 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~ 733 (876)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred EEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 999999999999999764 35689999999999999999999999 99999999999999999999999999988765
Q ss_pred ccccccccccccccccccCccccC-----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccc
Q 002826 734 EAAFQSTMSSEYALSCYNAPEYGY-----SKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGA 808 (876)
Q Consensus 734 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (876)
.... ......|++.|+|||.+. ...++.++||||||+++|||++|+.||........ ...... .. .
T Consensus 181 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~---~~--~ 251 (326)
T 2x7f_A 181 RTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA--LFLIPR---NP--A 251 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHHH---SC--C
T ss_pred cCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH--HHHhhc---Cc--c
Confidence 3221 123345899999999876 56688999999999999999999999976443221 111111 10 0
Q ss_pred ccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 809 IQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 809 ~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
.....+ .....+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 252 PRLKSK-------KWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CCCSCS-------CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCCcc-------ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000011 11236789999999999999999999987
No 267
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.1e-34 Score=319.81 Aligned_cols=302 Identities=23% Similarity=0.327 Sum_probs=225.6
Q ss_pred EEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCC
Q 002826 76 TVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGS 155 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~ 155 (876)
.+..+++.++++... + .+..+++|++|+|++|.+++..+ +..+++|++|+|++|.+ ++ + +.|..
T Consensus 45 ~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i----------~~-~-~~~~~ 108 (347)
T 4fmz_A 45 SITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKI----------TD-I-SALQN 108 (347)
T ss_dssp TCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC----------CC-C-GGGTT
T ss_pred cccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcc----------cC-c-hHHcC
Confidence 456788888888653 3 48899999999999999998655 99999999887776655 33 2 35899
Q ss_pred ccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEE
Q 002826 156 LVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSIL 235 (876)
Q Consensus 156 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 235 (876)
+++|++|+|++|++++..+ +.++++|++|++++|.. .. .+..+..+++|++|++++|.+.+..+ +..+++|++|
T Consensus 109 l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~-~~-~~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L 182 (347)
T 4fmz_A 109 LTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHN-LS-DLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSL 182 (347)
T ss_dssp CTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTT-CC-CCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEE
T ss_pred CCcCCEEECcCCcccCchh--hccCCceeEEECCCCCC-cc-cccchhhCCCCcEEEecCCCcCCchh--hccCCCCCEE
Confidence 9999999999999996544 89999999999999972 33 34459999999999999999987654 8899999999
Q ss_pred ecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccC
Q 002826 236 DLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGF 315 (876)
Q Consensus 236 ~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 315 (876)
++++|+++ .++. +..+++|+.|++++|++++..+ +..+++|++|++++|.+++..+ +..+++|++|++++|.+
T Consensus 183 ~l~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l 255 (347)
T 4fmz_A 183 SLNYNQIE-DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQI 255 (347)
T ss_dssp ECTTSCCC-CCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EccCCccc-cccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCcc
Confidence 99999999 5655 4569999999999999996655 8899999999999999986554 77778888888888877
Q ss_pred CCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCc
Q 002826 316 SGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNF 395 (876)
Q Consensus 316 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~ 395 (876)
++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..|. .|
T Consensus 256 ~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~------------------------~l 307 (347)
T 4fmz_A 256 SDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDME------------------------VI 307 (347)
T ss_dssp CCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHH------------------------HH
T ss_pred CCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChh------------------------Hh
Confidence 753 3466666666666666666543 2345555555555555555544444 44
Q ss_pred CCCCCccEEEccCCccccCCcCcccccccceEeccCCcCC
Q 002826 396 CDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLT 435 (876)
Q Consensus 396 ~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 435 (876)
..+++|+.|++++|++++.++ +..+++|++|++++|+|+
T Consensus 308 ~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 308 GGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC---
T ss_pred hccccCCEEEccCCccccccC-hhhhhccceeehhhhccc
Confidence 445555555555555555444 555666666666666654
No 268
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.7e-35 Score=327.34 Aligned_cols=256 Identities=21% Similarity=0.319 Sum_probs=191.4
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCcc--CHHHHHHHHHHHhhccCccccceeeEEEeCCeE-----
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQ--SSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESI----- 653 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~----- 653 (876)
.|.....+|.|| ||+||+|.. .+|+.||+|++...... ....+.+|+.+++.++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~-~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 43 TYVSPTHVGSGA-YGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred cEEEEeEEecCC-CeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 444455566655 999999965 47999999999754322 246788999999999999999999999876654
Q ss_pred -EEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhc
Q 002826 654 -FLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIV 732 (876)
Q Consensus 654 -~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~ 732 (876)
++||||++ ++|.+++. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 122 ~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp CEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred EEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99999998 48888774 3589999999999999999999999 9999999999999999999999999999866
Q ss_pred cccccccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccc-
Q 002826 733 GEAAFQSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQ- 810 (876)
Q Consensus 733 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 810 (876)
... .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||........ .................
T Consensus 195 ~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 195 DAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCHHHHTT
T ss_pred ccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCcHHHHHH
Confidence 432 233458999999998876 6789999999999999999999999987543221 11111110000000000
Q ss_pred ---------------ccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 811 ---------------VLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 811 ---------------~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.....+..........+.+++.+|++.||++|||+.|+++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00011111222335678899999999999999999999875
No 269
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.3e-35 Score=333.58 Aligned_cols=268 Identities=22% Similarity=0.298 Sum_probs=198.8
Q ss_pred cchhhhhhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhcc--------Ccccccee
Q 002826 574 VTEHDLVIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIR--------HKNIVKVL 644 (876)
Q Consensus 574 ~~~~~l~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~ 644 (876)
+..+++..+.|++.+..|.|+||+||+|.. .+++.||||++... ....+.+.+|+++++.++ |+||++++
T Consensus 29 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~ 107 (397)
T 1wak_A 29 VKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLL 107 (397)
T ss_dssp SCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEE
T ss_pred EehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeee
Confidence 344555555455555555555999999965 57899999998643 234567889999999996 78899999
Q ss_pred eEEE----eCCeEEEEEEcCCCCCHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCC
Q 002826 645 GFFH----SDESIFLIYEFLQMGSLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADF 719 (876)
Q Consensus 645 ~~~~----~~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~ 719 (876)
+++. .....++||||+.+ ++.+.+.+. ...+++..+..++.|++.||+|||+++ +|+||||||+|||++.++
T Consensus 108 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 108 DDFKISGVNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNE 184 (397)
T ss_dssp EEEEEEETTEEEEEEEECCCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCH
T ss_pred cceeecCCCCceEEEEEeccCc-cHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccc
Confidence 9987 45679999999954 666655443 457999999999999999999999852 799999999999999775
Q ss_pred -------------------------------------------------CeEEccccchhhccccccccccccccccccc
Q 002826 720 -------------------------------------------------EPKLTDFALDRIVGEAAFQSTMSSEYALSCY 750 (876)
Q Consensus 720 -------------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y 750 (876)
.+||+|||+++..... .....||+.|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y 259 (397)
T 1wak_A 185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQY 259 (397)
T ss_dssp HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGG
T ss_pred hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcc
Confidence 8999999999876532 2334589999
Q ss_pred cCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchh----hHHHHHHHHh-hcccc-------ccccc------
Q 002826 751 NAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESL----DVVKWVRRKI-NITNG-------AIQVL------ 812 (876)
Q Consensus 751 ~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~----~~~~~~~~~~-~~~~~-------~~~~~------ 812 (876)
+|||++.+..++.++|||||||++|||++|+.||........ .......... ..... ....+
T Consensus 260 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 339 (397)
T 1wak_A 260 RSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL 339 (397)
T ss_dssp CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSB
T ss_pred cCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccc
Confidence 999999888899999999999999999999999986543321 1111111111 00000 00000
Q ss_pred ----C--h--------hhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 813 ----D--P--------KIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 813 ----d--~--------~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
+ + ............+.+++.+||+.||++|||+.|+++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 340 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp SSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0 0 000223556678999999999999999999999986
No 270
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=323.20 Aligned_cols=261 Identities=21% Similarity=0.319 Sum_probs=189.7
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEE------------
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFH------------ 648 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~------------ 648 (876)
.|.....+|.|| ||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 12 ~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 12 RYMDLKPLGCGG-NGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TEEEEEECC------CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred ceeEEEEeccCC-CeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 444445555555 9999999775 59999999997655455677889999999999999999999873
Q ss_pred --eCCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeC-CCCCeEEcc
Q 002826 649 --SDESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLD-ADFEPKLTD 725 (876)
Q Consensus 649 --~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~-~~~~~kl~D 725 (876)
+.+..++||||++ |+|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++ +++.+||+|
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 3467899999998 599999865 3689999999999999999999999 999999999999997 567999999
Q ss_pred ccchhhcccccc-ccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhh
Q 002826 726 FALDRIVGEAAF-QSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKIN 803 (876)
Q Consensus 726 fGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 803 (876)
||+++....... ........+|..|+|||.... ..++.++||||||+++|||++|+.||........ ..........
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~ 243 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ-MQLILESIPV 243 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHSCC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCC
Confidence 999987653211 122334457889999998754 6789999999999999999999999987543221 1111110000
Q ss_pred cc----ccccccc-----------ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 804 IT----NGAIQVL-----------DPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 804 ~~----~~~~~~~-----------d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
.. ......+ ..............+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00 0000000 00011111223457889999999999999999999987
No 271
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.5e-35 Score=331.78 Aligned_cols=261 Identities=21% Similarity=0.305 Sum_probs=190.7
Q ss_pred ccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeCCe------EEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDES------IFLI 656 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------~~lv 656 (876)
|.....+|.|| ||+||+|+...+..||+|++.... ....+|+++++.++||||+++++++...+. .++|
T Consensus 42 Y~~~~~lG~G~-~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 42 YTNCKVIGNGS-FGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEET-TEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred EEEeEEEeeCC-CeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 44444455555 999999998777779999886532 223479999999999999999999966433 8899
Q ss_pred EEcCCCCCHHHHhh--ccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeC-CCCCeEEccccchhhcc
Q 002826 657 YEFLQMGSLGDLIC--RQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLD-ADFEPKLTDFALDRIVG 733 (876)
Q Consensus 657 ~e~~~~gsL~~~l~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~-~~~~~kl~DfGla~~~~ 733 (876)
|||++++.+..... .....+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++...
T Consensus 117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 99998854333322 2255799999999999999999999999 999999999999999 78999999999998764
Q ss_pred ccccccccccccccccccCccccCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhh---------
Q 002826 734 EAAFQSTMSSEYALSCYNAPEYGYSK-KATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKIN--------- 803 (876)
Q Consensus 734 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~--------- 803 (876)
.... .....||+.|+|||.+.+. .++.++||||+||++|||++|++||....... ......+....
T Consensus 194 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 194 AGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp TTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHH
T ss_pred CCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHhh
Confidence 3321 2334589999999988664 58999999999999999999999998755332 22222221100
Q ss_pred ---cccccccccC-hhhh-hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhc
Q 002826 804 ---ITNGAIQVLD-PKIA-NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA--LHSL 855 (876)
Q Consensus 804 ---~~~~~~~~~d-~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~--L~~i 855 (876)
.......... ..+. .........+.+++.+||+.||++|||+.|+++. ++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 0000000000 0011 1111234578899999999999999999999974 4444
No 272
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.7e-35 Score=334.29 Aligned_cols=256 Identities=25% Similarity=0.341 Sum_probs=188.7
Q ss_pred ccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEeC------CeEEE
Q 002826 583 MDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSD------ESIFL 655 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~l 655 (876)
|.....+|.|+ ||+||+|... +|+.||||++.... ....+|+++++.++||||+++++++... ...++
T Consensus 56 y~~~~~lG~G~-fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 56 YTDTKVIGNGS-FGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred EEeeeEEeeCC-CEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 44445555555 9999999775 69999999986532 2334799999999999999999998542 23679
Q ss_pred EEEcCCCCCHHHHhh---ccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCC-CCeEEccccchhh
Q 002826 656 IYEFLQMGSLGDLIC---RQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDAD-FEPKLTDFALDRI 731 (876)
Q Consensus 656 v~e~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~-~~~kl~DfGla~~ 731 (876)
||||+++ ++.+.+. +....+++..+..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+++.
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 9999987 6766654 2356799999999999999999999999 99999999999999965 6689999999987
Q ss_pred ccccccccccccccccccccCccccCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhh-------
Q 002826 732 VGEAAFQSTMSSEYALSCYNAPEYGYSK-KATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKIN------- 803 (876)
Q Consensus 732 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~------- 803 (876)
...... .....||+.|+|||++.+. .++.++||||+||++|||++|++||......+ .+.+.++....
T Consensus 207 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 207 LVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHH
T ss_pred cccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHH
Confidence 643321 2334589999999998764 68999999999999999999999998754322 22222221100
Q ss_pred -cccccccccChhh-----h-hhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 804 -ITNGAIQVLDPKI-----A-NCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 804 -~~~~~~~~~d~~~-----~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
........-.+.+ . .........+.+++.+||+.||++|||+.|+++.
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 0000000000100 0 0111224568899999999999999999999863
No 273
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=7.7e-35 Score=311.93 Aligned_cols=253 Identities=23% Similarity=0.324 Sum_probs=199.5
Q ss_pred hhhhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCC--ccCHHHHHHHHHHHhhccCccccceeeEEEeCCeE
Q 002826 577 HDLVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFG--CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDESI 653 (876)
Q Consensus 577 ~~l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 653 (876)
+++...|.....+|.|| ||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..
T Consensus 18 ~~~~~~y~i~~~lg~G~-~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGS-FGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp HHHHHHEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHhhcceeeEEEcCCC-CEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 34444555556666655 9999999765 79999999996542 24567889999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCC---CCeEEccccchh
Q 002826 654 FLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDAD---FEPKLTDFALDR 730 (876)
Q Consensus 654 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~---~~~kl~DfGla~ 730 (876)
++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.+ +.+||+|||+++
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp EEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 99999999999999886654 689999999999999999999999 99999999999999754 479999999998
Q ss_pred hccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccc
Q 002826 731 IVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQ 810 (876)
Q Consensus 731 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (876)
....... .....|++.|+|||...+ .++.++||||+|+++|+|++|+.||....... ....+.. .. ..
T Consensus 173 ~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~---~~---~~ 240 (287)
T 2wei_A 173 CFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--ILKRVET---GK---YA 240 (287)
T ss_dssp TBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH---CC---CC
T ss_pred eecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH--HHHHHHc---CC---CC
Confidence 7654321 223347889999998765 48899999999999999999999997654322 1221111 10 00
Q ss_pred ccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 811 VLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 811 ~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
...+.. ...+..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 241 FDLPQW----RTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCSGGG----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCchhh----hhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 001111 112345789999999999999999999997
No 274
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=9.2e-35 Score=324.54 Aligned_cols=205 Identities=23% Similarity=0.289 Sum_probs=166.2
Q ss_pred hhhhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhcc-Cc-----cccceeeEEEe
Q 002826 577 HDLVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIR-HK-----NIVKVLGFFHS 649 (876)
Q Consensus 577 ~~l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~ 649 (876)
++...+.+++.+..|.|+||+||+|... +++.||||++... .....++..|+.+++.++ |+ +++++++++..
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 3333334444444444559999999654 7899999999643 233456778999998885 44 49999999999
Q ss_pred CCeEEEEEEcCCCCCHHHHhhccC-CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeC--CCCCeEEccc
Q 002826 650 DESIFLIYEFLQMGSLGDLICRQD-FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLD--ADFEPKLTDF 726 (876)
Q Consensus 650 ~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~--~~~~~kl~Df 726 (876)
.+..++||||+++ +|.+++.... ..+++..+..++.|++.|++|||++ ..+|+||||||+|||++ .++.+||+||
T Consensus 128 ~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DF 205 (382)
T 2vx3_A 128 RNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDF 205 (382)
T ss_dssp TTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred CCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEec
Confidence 9999999999975 9999997653 4689999999999999999999952 12899999999999995 4788999999
Q ss_pred cchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCc
Q 002826 727 ALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPA 789 (876)
Q Consensus 727 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~ 789 (876)
|+++..... .....||+.|+|||++.+..++.++|||||||++|||++|++||.....
T Consensus 206 G~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 206 GSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp TTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999876532 2334589999999999998999999999999999999999999987543
No 275
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.6e-35 Score=319.22 Aligned_cols=259 Identities=32% Similarity=0.468 Sum_probs=182.5
Q ss_pred CCCcEEecccCccCC--CCCCccccccccccEEEecc-ccccCcCCcccccCCccceeeeecccccccCCCCCccccccc
Q 002826 230 QSLSILDLSQNNLTG--EVPQSLGSSLLKLVSFDVSQ-NKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLE 306 (876)
Q Consensus 230 ~~L~~L~Ls~N~l~~--~ip~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 306 (876)
.+++.|+|++|++++ .+|..+. .+++|++|+|++ |++.+.+|..|.++++|++|+|++|.+++.+|..|..+++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~-~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLA-NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGG-GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhHh-CCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 467777777777776 6666554 477777777774 777777777777777777777777777777777777777777
Q ss_pred eeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCC-CCCeeeccCcccCCCCCCccccccCccEEeCCCc
Q 002826 307 RFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAA-QLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQN 385 (876)
Q Consensus 307 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 385 (876)
+|++++|.+++.+|..+..+++|++|++++|++++.+|..+..+. +|++|++++|++++.+|..+..++ |+.|++++|
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 777777777777777777777777777777777777777777666 777777777777766777776665 777777777
Q ss_pred cccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCc
Q 002826 386 SFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQG 465 (876)
Q Consensus 386 ~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 465 (876)
.+++..|..|..+++|+.|+|++|++++.++.+..+++|++|+|++|++++.+|..|..+++|++|+|++|+++|.+|..
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 77666666666666666666666666665555666666666666666666666666666666666666666666555543
Q ss_pred ccccccceEEccCCccccccCCcccCCCCCccccCCCCCCCCCCCCCC
Q 002826 466 LQNLKLALFNVSFNKLSGRVPYSLISGLPASYLQGNPGLCGPGLSNSC 513 (876)
Q Consensus 466 ~~~l~l~~l~ls~N~l~~~~p~~~~~~~~~~~~~~N~~~C~~~~~~~c 513 (876)
.. +.++..+++.+||++||.|++ .|
T Consensus 288 -~~---------------------l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 288 -GN---------------------LQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp -TT---------------------GGGSCGGGTCSSSEEESTTSS-CC
T ss_pred -cc---------------------ccccChHHhcCCCCccCCCCC-CC
Confidence 11 345677889999999998876 46
No 276
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.7e-35 Score=325.50 Aligned_cols=261 Identities=25% Similarity=0.357 Sum_probs=194.2
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeC-----CeEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSD-----ESIF 654 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 654 (876)
+|.....+|.|| ||.||+|... +|+.||||++..... .....+.+|++++++++||||+++++++... ...+
T Consensus 12 ~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 12 DFQLKSLLGEGA-YGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred ceEEeeEEcCCC-CeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 444445555555 9999999765 799999999964322 2245678999999999999999999998764 6799
Q ss_pred EEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccc
Q 002826 655 LIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGE 734 (876)
Q Consensus 655 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 734 (876)
+||||+++ +|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 91 lv~e~~~~-~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 91 IIQELMQT-DLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEECCCSE-EHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEeccCc-cHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 99999974 999998763 689999999999999999999999 999999999999999999999999999987653
Q ss_pred cccc--------cccccccccccccCccccC-CCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcc
Q 002826 735 AAFQ--------STMSSEYALSCYNAPEYGY-SKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINIT 805 (876)
Q Consensus 735 ~~~~--------~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 805 (876)
.... .......||+.|+|||.+. ...++.++||||+||++|||++|++||........ ...+.......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~ 242 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ--LLLIFGIIGTP 242 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCC
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCCC
Confidence 2211 1122346899999999765 46789999999999999999999999987543321 11111111000
Q ss_pred c---ccccc---------------cChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 806 N---GAIQV---------------LDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 806 ~---~~~~~---------------~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
. ..... ...............+.+++.+||+.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 00000 0011111122334567899999999999999999999873
No 277
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.1e-35 Score=333.57 Aligned_cols=251 Identities=19% Similarity=0.293 Sum_probs=184.6
Q ss_pred cccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEEEcC
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
+++...+..|.|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+++..|+||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 444444544555599998877778999999998652 345678999999987 8999999999999999999999999
Q ss_pred CCCCHHHHhhccCCc------CCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCC-------------CCe
Q 002826 661 QMGSLGDLICRQDFQ------LQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDAD-------------FEP 721 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~------l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~-------------~~~ 721 (876)
+ |+|.+++...... .++..+.+++.||+.||+|||+. +|+||||||+||+++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 5999999765321 12334578999999999999999 99999999999999654 489
Q ss_pred EEccccchhhccccccc--cccccccccccccCccccCC-------CCCCCccchHHHHHHHHHHHh-CCCCCCCCCcch
Q 002826 722 KLTDFALDRIVGEAAFQ--STMSSEYALSCYNAPEYGYS-------KKATAQMDAYSFGVVLLELIT-GRQAEQAEPAES 791 (876)
Q Consensus 722 kl~DfGla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~ 791 (876)
||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 99999999877543211 12234569999999998865 568999999999999999999 999997543322
Q ss_pred hhHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 792 LDVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
. .......... . . + ..........+.+++.+||+.||++|||+.|+++
T Consensus 248 ~---~i~~~~~~~~----~-~-~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 S---NIIRGIFSLD----E-M-K--CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp H---HHHHTCCCCC----C-C-T--TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H---HHhcCCCCcc----c-c-c--ccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1 1111111110 0 0 0 0112234567889999999999999999999986
No 278
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2e-35 Score=323.85 Aligned_cols=253 Identities=20% Similarity=0.273 Sum_probs=169.6
Q ss_pred hhhhcccccCC-CCCCCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccccceeeEEEe----CC
Q 002826 578 DLVIGMDEKSS-AGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNIVKVLGFFHS----DE 651 (876)
Q Consensus 578 ~l~~~~~~~~~-~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~ 651 (876)
++..+|....+ +|.|| ||+||+|... +|+.||+|++... .....+....++.++||||+++++++.. ..
T Consensus 25 ~~~~~y~i~~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGV-NGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp CGGGTEEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccceeEecceeeeeCC-CeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 34445554455 55555 9999999765 7999999998642 2222333334566789999999999976 44
Q ss_pred eEEEEEEcCCCCCHHHHhhccC-CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC---CCCeEEcccc
Q 002826 652 SIFLIYEFLQMGSLGDLICRQD-FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA---DFEPKLTDFA 727 (876)
Q Consensus 652 ~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~---~~~~kl~DfG 727 (876)
..++||||+++|+|.+++.+.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred eEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 5899999999999999998663 4699999999999999999999999 9999999999999976 4569999999
Q ss_pred chhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccc
Q 002826 728 LDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNG 807 (876)
Q Consensus 728 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 807 (876)
+++...... .....||+.|+|||.+....++.++||||+|+++|||++|+.||.......... .........
T Consensus 177 ~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~-- 248 (336)
T 3fhr_A 177 FAKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP--GMKRRIRLG-- 248 (336)
T ss_dssp TCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred cceeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh--hHHHhhhcc--
Confidence 997654322 233457999999999988888999999999999999999999997654332110 000000000
Q ss_pred cccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 808 AIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 808 ~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
......+. +......+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 249 QYGFPNPE----WSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp --CCCTTT----STTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccccCchh----hccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00001111 1122346789999999999999999999998
No 279
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=332.80 Aligned_cols=247 Identities=21% Similarity=0.290 Sum_probs=184.1
Q ss_pred ccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEEEcCC
Q 002826 583 MDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIYEFLQ 661 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 661 (876)
|.....+|.|| ||+||.....+|+.||||++.... ...+.+|+++++.+ +|||||++++++.+.+..|+||||++
T Consensus 26 y~~~~~LG~G~-~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 26 FCPKDVLGHGA-EGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEECG-GGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EecCCeeecCc-CEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 33444555555 999776666689999999986532 23467899999999 79999999999999999999999997
Q ss_pred CCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC-----CCCeEEccccchhhccccc
Q 002826 662 MGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA-----DFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 662 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~-----~~~~kl~DfGla~~~~~~~ 736 (876)
+ +|.+++........+..+..++.|++.||+|||+. +|+||||||+||+++. ...+||+|||+++......
T Consensus 102 g-~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 102 A-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp E-EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred C-CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 5 99999987765666667789999999999999999 9999999999999953 3468899999998765332
Q ss_pred c-ccccccccccccccCccccC---CCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchhhHHHHHHHHhhcccccccc
Q 002826 737 F-QSTMSSEYALSCYNAPEYGY---SKKATAQMDAYSFGVVLLELIT-GRQAEQAEPAESLDVVKWVRRKINITNGAIQV 811 (876)
Q Consensus 737 ~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (876)
. ........||+.|+|||++. ...++.++||||+||++|||++ |+.||......... . ..... ....
T Consensus 178 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~---~---~~~~~--~~~~ 249 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN---I---LLGAC--SLDC 249 (432)
T ss_dssp --------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH---H---HTTCC--CCTT
T ss_pred cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH---H---HhccC--Cccc
Confidence 1 12234456999999999987 4567889999999999999999 99998654332211 1 11100 1111
Q ss_pred cChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 812 LDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 812 ~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
..+ .......+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 250 LHP-----EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp SCT-----TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cCc-----cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 111 1123445789999999999999999999984
No 280
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=9.7e-35 Score=321.08 Aligned_cols=265 Identities=19% Similarity=0.237 Sum_probs=197.2
Q ss_pred cchhhhhhcccccCCCCCCCCceEEEEEEeC-CC-cEEEEEEEecCCccCHHHHHHHHHHHhhccCcc------ccceee
Q 002826 574 VTEHDLVIGMDEKSSAGNGGPFGRVYILSLP-SG-ELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKN------IVKVLG 645 (876)
Q Consensus 574 ~~~~~l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~ 645 (876)
...++...+.|++.+..|.|+||+||+|... ++ +.||+|++... ......+.+|++++++++|++ ++.+++
T Consensus 11 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 89 (355)
T 2eu9_A 11 CRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSD 89 (355)
T ss_dssp CCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEE
T ss_pred cccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeee
Confidence 3344544444444444455559999999764 44 78999998643 234567888999999998776 899999
Q ss_pred EEEeCCeEEEEEEcCCCCCHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceee---------
Q 002826 646 FFHSDESIFLIYEFLQMGSLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILL--------- 715 (876)
Q Consensus 646 ~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll--------- 715 (876)
++...+..++||||+ ++++.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 90 ~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~ 165 (355)
T 2eu9_A 90 WFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLY 165 (355)
T ss_dssp EEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEE
T ss_pred eeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccc
Confidence 999999999999999 55777766554 35799999999999999999999999 99999999999999
Q ss_pred ----------CCCCCeEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCC
Q 002826 716 ----------DADFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQ 785 (876)
Q Consensus 716 ----------~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~ 785 (876)
+.++.+||+|||+++..... .....||+.|+|||.+.+..++.++||||+||++|||++|+.||.
T Consensus 166 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 240 (355)
T 2eu9_A 166 NEHKSCEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240 (355)
T ss_dssp CCC-CCCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence 56789999999999765432 233458999999999998899999999999999999999999998
Q ss_pred CCCcchhhHHHHHHHHh-hcccccc-------------cccCh----------------hhhhhcHHHHHHHHHHHHHcc
Q 002826 786 AEPAESLDVVKWVRRKI-NITNGAI-------------QVLDP----------------KIANCYQQQMLGALEIALRCT 835 (876)
Q Consensus 786 ~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~d~----------------~~~~~~~~~~~~~~~li~~cl 835 (876)
....... ...+.... ..+.... ...+. ........+...+.+++.+||
T Consensus 241 ~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L 318 (355)
T 2eu9_A 241 THENREH--LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRML 318 (355)
T ss_dssp CSSHHHH--HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHT
T ss_pred CCCHHHH--HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHh
Confidence 6543321 11111111 1000000 00000 000011233557889999999
Q ss_pred CCCCCCCCCHHHHHH
Q 002826 836 SVMPEKRPSMFEVVK 850 (876)
Q Consensus 836 ~~dP~~RPs~~ell~ 850 (876)
+.||++|||+.|+++
T Consensus 319 ~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 319 EFDPAQRITLAEALL 333 (355)
T ss_dssp CSSTTTSCCHHHHTT
T ss_pred cCChhhCcCHHHHhc
Confidence 999999999999985
No 281
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=7.1e-35 Score=322.01 Aligned_cols=255 Identities=21% Similarity=0.318 Sum_probs=190.8
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCcc--CHHHHHHHHHHHhhccCccccceeeEEEeCCe------
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQ--SSKTLKTEVKTLAKIRHKNIVKVLGFFHSDES------ 652 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 652 (876)
.|.....+|.|| ||.||+|.. .+|+.||||++...... ....+.+|+.+++.++||||+++++++...+.
T Consensus 25 ~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 25 TYVSPTHVGSGA-YGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred eEEEeeeEecCC-CeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 444445566655 999999976 47999999999654322 23567899999999999999999999987643
Q ss_pred EEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhc
Q 002826 653 IFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIV 732 (876)
Q Consensus 653 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~ 732 (876)
.|+||||+++ +|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 104 ~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 104 FYLVMPFMQT-DLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CEEEEECCSE-EGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred EEEEeccccC-CHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 5999999984 88887743 589999999999999999999999 9999999999999999999999999999865
Q ss_pred cccccccccccccccccccCccccCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhc-cccc--
Q 002826 733 GEAAFQSTMSSEYALSCYNAPEYGYS-KKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINI-TNGA-- 808 (876)
Q Consensus 733 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~-- 808 (876)
... .....||+.|+|||.+.+ ..++.++||||+|+++|||++|+.||........ ...+...... ....
T Consensus 177 ~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 177 DAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ--LTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH--HHHHHHHHCBCCHHHHT
T ss_pred CCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHH
Confidence 432 223458899999998876 6789999999999999999999999987543221 1111111000 0000
Q ss_pred --------------ccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 809 --------------IQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 809 --------------~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
.....+.+..........+.+++.+|++.||++|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000111111222335578899999999999999999999874
No 282
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=315.66 Aligned_cols=249 Identities=23% Similarity=0.319 Sum_probs=177.1
Q ss_pred cccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccC--HHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQS--SKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 658 (876)
+|.....+|.|+ ||.||+|... +|+.||||++....... .+.+.++..+++.++||||+++++++.+++..++|||
T Consensus 26 ~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 26 DLENLGEMGSGT-CGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GEEEEEEC-------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred cccccceeeecC-CeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 344445566555 9999999775 79999999997643221 2234445557788899999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhc-cCCCCccccccccCceeeCCCCCeEEccccchhhcccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHK-DYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAF 737 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 737 (876)
|+ ++.+..+.......+++..+..++.|++.|++|||+ . +|+||||||+||+++.++.+||+|||+++.......
T Consensus 105 ~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 105 LM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp CC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred cc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 99 556666665556679999999999999999999998 6 899999999999999999999999999977654321
Q ss_pred ccccccccccccccCccccC-----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccccc
Q 002826 738 QSTMSSEYALSCYNAPEYGY-----SKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVL 812 (876)
Q Consensus 738 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (876)
.....||+.|+|||.+. ...++.++||||||+++|||++|+.||............... ... ..+
T Consensus 181 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~----~~~ 250 (318)
T 2dyl_A 181 ---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ---EEP----PLL 250 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHH---SCC----CCC
T ss_pred ---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhc---cCC----CCC
Confidence 22345889999999974 456888999999999999999999999864433221111111 110 000
Q ss_pred ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 813 DPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 813 d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
+. .......+.+++.+||+.||.+|||+.|+++
T Consensus 251 -~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 251 -PG----HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp -CS----SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -Cc----cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00 0012235789999999999999999999987
No 283
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.7e-33 Score=308.01 Aligned_cols=286 Identities=19% Similarity=0.290 Sum_probs=196.9
Q ss_pred ccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCC-CCcccccCcccEEEecCCCCcccCCccccCCCCCcEEe
Q 002826 158 NLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEI-PSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILD 236 (876)
Q Consensus 158 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~-p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 236 (876)
+|+.+++++|.++ .+|..+. ++|++|+|++|. +..+ |..|.++++|++|+|++|+++++.|..|.++++|++|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~--i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNND--ISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSC--CCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCc--CCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 5667777777766 4454442 467777777776 3334 34577777777777777777777777888888888888
Q ss_pred cccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeeccccc--ccCCCCCccccccceeeccccc
Q 002826 237 LSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFN--GSIPGSINECLNLERFQVQDNG 314 (876)
Q Consensus 237 Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~--~~~~~~~~~l~~L~~L~L~~N~ 314 (876)
|++|+++ .+|..++ ++|++|++++|++++..+..|..+++|++|++++|.++ +..+..|..+ +|++|++++|+
T Consensus 109 L~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~ 183 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAK 183 (332)
T ss_dssp CCSSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSB
T ss_pred CCCCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCC
Confidence 8888887 7777654 67888888888888766667778888888888888875 3667777777 78888888888
Q ss_pred CCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCC
Q 002826 315 FSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPN 394 (876)
Q Consensus 315 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~ 394 (876)
+++ +|..+. ++|+.|++++|++++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|+++ .+|..
T Consensus 184 l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 259 (332)
T 2ft3_A 184 LTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAG 259 (332)
T ss_dssp CSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTT
T ss_pred CCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChh
Confidence 775 444433 56777777777777666667777777777777777777666666777777777777777766 55556
Q ss_pred cCCCCCccEEEccCCccccCCc-Cccc------ccccceEeccCCcCC--CCCCcCCCCCCCcceeeCCCCc
Q 002826 395 FCDSPVMSIINLSQNSISGQIP-ELKK------CRKLVSLSLADNSLT--GEIPPSLAELPVLTYLDLSDNN 457 (876)
Q Consensus 395 ~~~~~~L~~L~Ls~N~l~~~~~-~~~~------l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~ 457 (876)
+..+++|+.|++++|+|++..+ .|.. ...|+.|++++|.+. +..|..|..+++|+.|++++|+
T Consensus 260 l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 260 LPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred hhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 6666667777777777665544 3332 355677777777766 5666677777777777777663
No 284
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.7e-33 Score=306.26 Aligned_cols=287 Identities=21% Similarity=0.296 Sum_probs=179.6
Q ss_pred ccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCC-cccccCcccEEEecCCCCcccCCccccCCCCCcEEe
Q 002826 158 NLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPS-DIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILD 236 (876)
Q Consensus 158 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 236 (876)
+|++++++++.++ .+|..+. ++|++|+|++|+ +..+|. .|.++++|++|+|++|+++++.|..|.++++|++|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~--i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNK--ITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSC--CCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCc--CCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 4555555555554 3333332 355555555555 333332 455666666666666666666677777777777777
Q ss_pred cccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccc--cCCCCCccccccceeeccccc
Q 002826 237 LSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNG--SIPGSINECLNLERFQVQDNG 314 (876)
Q Consensus 237 Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~L~~N~ 314 (876)
|++|+++ .+|..++ ++|++|++++|++++..+..|.++++|++|++++|.++. ..+..|..+++|++|++++|+
T Consensus 107 Ls~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~ 182 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN 182 (330)
T ss_dssp CCSSCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC
T ss_pred CCCCcCC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCc
Confidence 7777777 6666553 567777777777776666667777777777777777753 566667777777777777777
Q ss_pred CCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCC
Q 002826 315 FSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPN 394 (876)
Q Consensus 315 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~ 394 (876)
++. +|..+. ++|+.|++++|++++..|..+..+++|++|++++|++++..+..+..+++|++|++++|+++ .+|..
T Consensus 183 l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 258 (330)
T 1xku_A 183 ITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGG 258 (330)
T ss_dssp CCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTT
T ss_pred ccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChh
Confidence 763 343332 56777777777777666666666677777777777776655556666666666666666666 45555
Q ss_pred cCCCCCccEEEccCCccccCCc-Cccc------ccccceEeccCCcCCC--CCCcCCCCCCCcceeeCCCCc
Q 002826 395 FCDSPVMSIINLSQNSISGQIP-ELKK------CRKLVSLSLADNSLTG--EIPPSLAELPVLTYLDLSDNN 457 (876)
Q Consensus 395 ~~~~~~L~~L~Ls~N~l~~~~~-~~~~------l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~ 457 (876)
+..+++|++|++++|+|++..+ .|.. ...|+.|++++|.+.. ..|..|..+.+|+.++|++|+
T Consensus 259 l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 259 LADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred hccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 6666666666666666665544 3322 3566667777776653 455666667777777776664
No 285
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4.2e-35 Score=319.08 Aligned_cols=239 Identities=21% Similarity=0.328 Sum_probs=190.6
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCcc------CHHHHHHHHHHHhhcc--CccccceeeEEEeCCe
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQ------SSKTLKTEVKTLAKIR--HKNIVKVLGFFHSDES 652 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~ 652 (876)
.|.....+|.| +||.||+|.. .+++.||||++...... ....+.+|+.++++++ ||||+++++++.+++.
T Consensus 44 ~y~~~~~lg~G-~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~ 122 (320)
T 3a99_A 44 QYQVGPLLGSG-GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 122 (320)
T ss_dssp TEEEEEECSSS-SSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred ceEEEEEEeeC-CCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence 34344445554 5999999965 57999999999754322 2345678999999996 5999999999999999
Q ss_pred EEEEEEcCCC-CCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeC-CCCCeEEccccchh
Q 002826 653 IFLIYEFLQM-GSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLD-ADFEPKLTDFALDR 730 (876)
Q Consensus 653 ~~lv~e~~~~-gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~-~~~~~kl~DfGla~ 730 (876)
.++|||++.+ ++|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+||+|||+++
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 9999999986 89999997654 689999999999999999999999 999999999999999 78999999999998
Q ss_pred hccccccccccccccccccccCccccCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccc
Q 002826 731 IVGEAAFQSTMSSEYALSCYNAPEYGYSKKA-TAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAI 809 (876)
Q Consensus 731 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (876)
...... .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||.... ..... .
T Consensus 199 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~~----~---- 259 (320)
T 3a99_A 199 LLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRG----Q---- 259 (320)
T ss_dssp ECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHC----C----
T ss_pred cccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhcc----c----
Confidence 765432 223458999999998876554 678999999999999999999986421 01110 0
Q ss_pred cccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 810 QVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 810 ~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
....+ .....+.+++.+||+.||++|||+.|+++.
T Consensus 260 ~~~~~-------~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 260 VFFRQ-------RVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CCCSS-------CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccccc-------cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111 112357899999999999999999999873
No 286
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.4e-34 Score=315.42 Aligned_cols=289 Identities=18% Similarity=0.237 Sum_probs=187.9
Q ss_pred CCChhHHHHHHHHHhhc-cCCCCCCCCCC--CCCCCCCccccceEecCCCCCccEEEEeecCCCCCcccccccccCCCCC
Q 002826 25 TSASTEKDTLLSFKASI-DDSKNSLSTWS--NTSNIHYCNWTGVTCVTTATASLTVASINLQSLNLSGEISSSVCELSSL 101 (876)
Q Consensus 25 ~~~~~~~~all~~k~~~-~~~~~~~~sW~--~~~~~~~C~w~gv~c~~~~~~~~~~~~l~l~~~~l~~~~~~~~~~l~~L 101 (876)
+...+|++||++||+++ .|+.+.+++|. .....++|.|.|++|..... .+. -...+++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~-----------------~l~--~~~~~~l 83 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATAD-----------------LLE--DATQPGR 83 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHH-----------------HHH--HHTSTTC
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHH-----------------HHh--cccccce
Confidence 34568999999999999 57777788994 11235899999999953210 000 0124567
Q ss_pred CeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCccccCCC
Q 002826 102 SNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFS 181 (876)
Q Consensus 102 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 181 (876)
+.|+|++|.++ .+|..++.+++|++|+|+ +|+++ .+|..|+.+++|++|+|++|+++ .+|..|++++
T Consensus 84 ~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~----------~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~ 150 (328)
T 4fcg_A 84 VALELRSVPLP-QFPDQAFRLSHLQHMTID----------AAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLN 150 (328)
T ss_dssp CEEEEESSCCS-SCCSCGGGGTTCSEEEEE----------SSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCT
T ss_pred eEEEccCCCch-hcChhhhhCCCCCEEECC----------CCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCc
Confidence 77777777776 466667777777766444 34444 56677777777777777777777 5676777777
Q ss_pred cceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEE
Q 002826 182 ELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFD 261 (876)
Q Consensus 182 ~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~ 261 (876)
+|++|+|++|+ ..+.+|..+... ..+..|.++++|++|+|++|+|+ .+|..+ ..+++|++|+
T Consensus 151 ~L~~L~L~~n~-~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l-~~l~~L~~L~ 212 (328)
T 4fcg_A 151 RLRELSIRACP-ELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASI-ANLQNLKSLK 212 (328)
T ss_dssp TCCEEEEEEET-TCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGG-GGCTTCCEEE
T ss_pred CCCEEECCCCC-CccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhh-cCCCCCCEEE
Confidence 77777777765 355666654430 11223445666666666666666 565554 3366666666
Q ss_pred eccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccc
Q 002826 262 VSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSG 341 (876)
Q Consensus 262 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 341 (876)
|++|++++ +|..+..+++|++|+|++|.+.+.+|..|..+++|++|++++|++.+.+|..+.++++|+.|++++|++.+
T Consensus 213 L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 213 IRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp EESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred ccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 66666663 44456666666666666666666666666666666666666666666666666666777777777766666
Q ss_pred cCccccccCCCCCeeeccCcccC
Q 002826 342 AIPDSISMAAQLEQVQIDNNRFT 364 (876)
Q Consensus 342 ~~~~~~~~l~~L~~L~L~~N~l~ 364 (876)
.+|+.+..+++|+.+++..|.+.
T Consensus 292 ~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 292 RLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCGGGGGSCTTCEEECCGGGSC
T ss_pred hccHHHhhccCceEEeCCHHHHH
Confidence 77777777777777776666554
No 287
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.2e-33 Score=307.27 Aligned_cols=287 Identities=22% Similarity=0.321 Sum_probs=169.4
Q ss_pred CCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCccccC
Q 002826 100 SLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGN 179 (876)
Q Consensus 100 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 179 (876)
+++.+++++|.++. +|..+. ++|++| +|++|++++..|..|.++++|++|+|++|++++..|..|++
T Consensus 34 ~l~~l~~~~~~l~~-ip~~~~--~~l~~L----------~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 100 (332)
T 2ft3_A 34 HLRVVQCSDLGLKA-VPKEIS--PDTTLL----------DLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSP 100 (332)
T ss_dssp ETTEEECCSSCCSS-CCSCCC--TTCCEE----------ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTT
T ss_pred cCCEEECCCCCccc-cCCCCC--CCCeEE----------ECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhC
Confidence 56777777777764 454442 445544 45555566666777888888888888888888777778888
Q ss_pred CCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCC--CCCCccccccccc
Q 002826 180 FSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTG--EVPQSLGSSLLKL 257 (876)
Q Consensus 180 l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~ip~~~~~~l~~L 257 (876)
+++|++|+|++|+ +..+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++. ..|.. +..+ +|
T Consensus 101 l~~L~~L~L~~n~--l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~~~l-~L 174 (332)
T 2ft3_A 101 LRKLQKLYISKNH--LVEIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGA-FDGL-KL 174 (332)
T ss_dssp CTTCCEEECCSSC--CCSCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTS-SCSC-CC
T ss_pred cCCCCEEECCCCc--CCccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCccc-ccCC-cc
Confidence 8888888888887 456666554 567777777777766666666667777777777776651 22222 2223 55
Q ss_pred cEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCC
Q 002826 258 VSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESN 337 (876)
Q Consensus 258 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 337 (876)
++|++++|++++ +|..+. ++|++|++++|.+++..+ ..|..+++|+.|++++|
T Consensus 175 ~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~------------------------~~l~~l~~L~~L~L~~N 227 (332)
T 2ft3_A 175 NYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIEL------------------------EDLLRYSKLYRLGLGHN 227 (332)
T ss_dssp SCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCT------------------------TSSTTCTTCSCCBCCSS
T ss_pred CEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCH------------------------HHhcCCCCCCEEECCCC
Confidence 555555555553 232221 344444444444444444 44444444444444444
Q ss_pred cccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCC------CCCccEEEccCCcc
Q 002826 338 RFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCD------SPVMSIINLSQNSI 411 (876)
Q Consensus 338 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~------~~~L~~L~Ls~N~l 411 (876)
++++..+..+..+++|++|++++|+++ .+|..+..+++|+.|++++|++++..+..|+. ...|+.|++++|.+
T Consensus 228 ~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~ 306 (332)
T 2ft3_A 228 QIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPV 306 (332)
T ss_dssp CCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSS
T ss_pred cCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcc
Confidence 444444444555555555555555555 44555555555555555555555555555543 25577777777777
Q ss_pred c--cCCc-CcccccccceEeccCCc
Q 002826 412 S--GQIP-ELKKCRKLVSLSLADNS 433 (876)
Q Consensus 412 ~--~~~~-~~~~l~~L~~L~Ls~N~ 433 (876)
. +..+ .|..+++|+.|+|++|+
T Consensus 307 ~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 307 PYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccccCcccccccchhhhhhccccc
Confidence 6 3444 57778888888888774
No 288
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=8e-35 Score=318.05 Aligned_cols=251 Identities=22% Similarity=0.290 Sum_probs=171.3
Q ss_pred cccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc-cCHHHHHHHHH-HHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 584 DEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC-QSSKTLKTEVK-TLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
.....+|.|+ ||.||+|... +|+.||||++..... ....++..|+. +++.++||||+++++++.+++..++||||+
T Consensus 25 ~~~~~lg~G~-~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~ 103 (327)
T 3aln_A 25 KDLGEIGRGA-YGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM 103 (327)
T ss_dssp EC-CEEEECS-SEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred hehheeccCC-CEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeec
Confidence 3344555555 9999999764 799999999976432 22344555665 677789999999999999999999999999
Q ss_pred CCCCHHHHhhc----cCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccc
Q 002826 661 QMGSLGDLICR----QDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAA 736 (876)
Q Consensus 661 ~~gsL~~~l~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 736 (876)
++ +|.+++.. ....+++..+.+++.|++.|+.|||+. .+|+||||||+||+++.++.+||+|||+++......
T Consensus 104 ~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 180 (327)
T 3aln_A 104 ST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI 180 (327)
T ss_dssp SE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----
T ss_pred CC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc
Confidence 86 88877753 245789999999999999999999995 289999999999999999999999999998765432
Q ss_pred cccccccccccccccCcccc----CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccccccccc
Q 002826 737 FQSTMSSEYALSCYNAPEYG----YSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVL 812 (876)
Q Consensus 737 ~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (876)
. .....||+.|+|||.+ .+..++.++||||||+++|||++|+.||........ .. .....+....+
T Consensus 181 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~---~~~~~~~~~~~ 250 (327)
T 3aln_A 181 A---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD----QL---TQVVKGDPPQL 250 (327)
T ss_dssp ----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSCCCCC
T ss_pred c---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH----HH---HHHhcCCCCCC
Confidence 1 2233589999999998 456689999999999999999999999976432111 00 01100000011
Q ss_pred ChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 813 DPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 813 d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
... ........+.+++.+||+.||++|||+.|+++.
T Consensus 251 ~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 251 SNS---EEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCC---SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCc---ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 110 011123468899999999999999999999873
No 289
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.3e-35 Score=317.91 Aligned_cols=241 Identities=22% Similarity=0.325 Sum_probs=185.5
Q ss_pred hhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCcc------CHHHHHHHHHHHhhc----cCccccceeeEEE
Q 002826 580 VIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQ------SSKTLKTEVKTLAKI----RHKNIVKVLGFFH 648 (876)
Q Consensus 580 ~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~~~~~~~ 648 (876)
..+|.....+|.|| ||.||+|.. .+++.||+|++...... ....+.+|+.+++++ +||||+++++++.
T Consensus 30 ~~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 30 EAEYRLGPLLGKGG-FGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp ---CEEEEEEEEET-TEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred hhceEEeeEEEcCC-CEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 33454455555555 999999966 47899999998654321 223456799999999 8999999999999
Q ss_pred eCCeEEEEEEc-CCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeC-CCCCeEEccc
Q 002826 649 SDESIFLIYEF-LQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLD-ADFEPKLTDF 726 (876)
Q Consensus 649 ~~~~~~lv~e~-~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~-~~~~~kl~Df 726 (876)
+.+..++|||| +.+++|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+||
T Consensus 109 ~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~df 184 (312)
T 2iwi_A 109 TQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDF 184 (312)
T ss_dssp ----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred cCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEEc
Confidence 99999999999 78999999997654 689999999999999999999999 999999999999999 8899999999
Q ss_pred cchhhccccccccccccccccccccCccccCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhcc
Q 002826 727 ALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKA-TAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINIT 805 (876)
Q Consensus 727 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 805 (876)
|+++...... .....|+..|+|||...+..+ +.++||||+|+++|||++|+.||.... ........
T Consensus 185 g~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~-- 251 (312)
T 2iwi_A 185 GSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EILEAELH-- 251 (312)
T ss_dssp SSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHTCCC--
T ss_pred chhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HHhhhccC--
Confidence 9998765432 233458999999998776555 458999999999999999999986421 11110000
Q ss_pred cccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 806 NGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 806 ~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
+. ......+.+++.+||+.||++|||+.|+++.
T Consensus 252 ------~~-------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 252 ------FP-------AHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ------CC-------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ------Cc-------ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 1123357899999999999999999999874
No 290
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.9e-34 Score=321.09 Aligned_cols=259 Identities=17% Similarity=0.237 Sum_probs=192.0
Q ss_pred ccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHHhhcc-----------CccccceeeEEEeC
Q 002826 583 MDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIR-----------HKNIVKVLGFFHSD 650 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~~~ 650 (876)
|.....+|.| +||+||+|.. .+++.||||++... ....+.+.+|++++++++ ||||+++++++...
T Consensus 21 y~~~~~lg~G-~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 21 YILVRKLGWG-HFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp EEEEEEEEEC-SSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred EEEEEeeeec-CCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 3334445555 5999999975 58999999998642 234567889999999886 89999999999865
Q ss_pred C----eEEEEEEcCCCCCHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeC------CCC
Q 002826 651 E----SIFLIYEFLQMGSLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLD------ADF 719 (876)
Q Consensus 651 ~----~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~------~~~ 719 (876)
+ ..++||||+ +++|.+++.+. ...+++..+..++.||+.||+|||+++ +|+||||||+||+++ ..+
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEE
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCcc
Confidence 4 789999999 88999999764 345999999999999999999999942 899999999999994 445
Q ss_pred CeEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcch-----hhH
Q 002826 720 EPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAES-----LDV 794 (876)
Q Consensus 720 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~-----~~~ 794 (876)
.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ...
T Consensus 176 ~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 176 QIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp EEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred eEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 8999999999876532 233458999999999988889999999999999999999999998654221 111
Q ss_pred HHHHHHHhhcccc----------------cccccC-----------hhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 002826 795 VKWVRRKINITNG----------------AIQVLD-----------PKIANCYQQQMLGALEIALRCTSVMPEKRPSMFE 847 (876)
Q Consensus 795 ~~~~~~~~~~~~~----------------~~~~~d-----------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~e 847 (876)
..........+.. ....+. .............+.+++.+||+.||++|||+.|
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 1111111000000 000000 0001223456778899999999999999999999
Q ss_pred HHHH
Q 002826 848 VVKA 851 (876)
Q Consensus 848 ll~~ 851 (876)
+++.
T Consensus 331 ll~h 334 (373)
T 1q8y_A 331 LVNH 334 (373)
T ss_dssp HHTC
T ss_pred HhhC
Confidence 9883
No 291
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1e-33 Score=302.52 Aligned_cols=244 Identities=13% Similarity=0.055 Sum_probs=186.0
Q ss_pred cccchhh-hhhcccccCCCCCCCCceEEEEEEeC-CCcEEEEEEEecCCccC---HHHHHHHHHHHhhccCccccceeeE
Q 002826 572 LRVTEHD-LVIGMDEKSSAGNGGPFGRVYILSLP-SGELIAVKKLVNFGCQS---SKTLKTEVKTLAKIRHKNIVKVLGF 646 (876)
Q Consensus 572 ~~~~~~~-l~~~~~~~~~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~ 646 (876)
..+..++ +..+.|++.+..+.|+||.||+|... +|+.||+|++....... .+.+.+|+..+++++||||++++++
T Consensus 20 ~~~~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~ 99 (286)
T 3uqc_A 20 VQLVPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDV 99 (286)
T ss_dssp CCCCTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred CcCCCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEE
Confidence 4555666 55555555555555559999999765 59999999997654333 2678899999999999999999999
Q ss_pred EEeCCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccc
Q 002826 647 FHSDESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDF 726 (876)
Q Consensus 647 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~Df 726 (876)
+.+++..|+||||++|++|.+++.+. .....+.+++.|++.||+|||+. +|+||||||+||+++.++.+||+++
T Consensus 100 ~~~~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~ 173 (286)
T 3uqc_A 100 VHTRAGGLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYP 173 (286)
T ss_dssp EEETTEEEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSC
T ss_pred EEECCcEEEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEec
Confidence 99999999999999999999999542 35567889999999999999999 9999999999999999999999855
Q ss_pred cchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccc
Q 002826 727 ALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITN 806 (876)
Q Consensus 727 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 806 (876)
| |++ .++.++|||||||++|||+||+.||............ ...
T Consensus 174 ~----------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-----~~~-- 217 (286)
T 3uqc_A 174 A----------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-----ERD-- 217 (286)
T ss_dssp C----------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-----CBC--
T ss_pred c----------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-----HHH--
Confidence 3 333 2678999999999999999999999875543210000 000
Q ss_pred ccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccCCc
Q 002826 807 GAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKALHSLSTRTS 860 (876)
Q Consensus 807 ~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~L~~i~~~~~ 860 (876)
..... +.........+..+.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 218 -~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 218 -TAGQP-IEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp -TTSCB-CCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred -hccCC-CChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 00000 00111112234468899999999999999 99999999999876544
No 292
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=8.9e-35 Score=338.36 Aligned_cols=267 Identities=21% Similarity=0.256 Sum_probs=198.1
Q ss_pred cccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCC-ccCHHHHHHHHHHHhhccCccccceeeEEEe------CCeE
Q 002826 582 GMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFG-CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHS------DESI 653 (876)
Q Consensus 582 ~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~ 653 (876)
.|.....+|.| +||+||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.. .+..
T Consensus 15 rY~i~~~LG~G-~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 15 PWEMKERLGTG-GFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp --CCCCCCCBC-SSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CeEEEEEEeeC-CCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 34444455555 4999999966 479999999986532 2234678899999999999999999999765 6678
Q ss_pred EEEEEcCCCCCHHHHhhccC--CcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCC---eEEccccc
Q 002826 654 FLIYEFLQMGSLGDLICRQD--FQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFE---PKLTDFAL 728 (876)
Q Consensus 654 ~lv~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~---~kl~DfGl 728 (876)
++||||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||.
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 99999999999999997643 3688999999999999999999999 9999999999999997665 99999999
Q ss_pred hhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHH-------
Q 002826 729 DRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRK------- 801 (876)
Q Consensus 729 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~------- 801 (876)
++....... .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||....... .|....
T Consensus 171 a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~----~~~~~i~~~~~~~ 243 (676)
T 3qa8_A 171 AKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV----QWHGKVREKSNEH 243 (676)
T ss_dssp CCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH----HSSTTCC------
T ss_pred ccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh----hhhhhhhcccchh
Confidence 987654332 234468999999999998899999999999999999999999997532211 110000
Q ss_pred h---hcccccc--cccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHhhcccCC
Q 002826 802 I---NITNGAI--QVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFE-----VVKALHSLSTRT 859 (876)
Q Consensus 802 ~---~~~~~~~--~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~e-----ll~~L~~i~~~~ 859 (876)
. ....+.. ....+............+.+++.+|++.||++|||+.| ..+.++++....
T Consensus 244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 0 0000000 00001111223345567899999999999999999988 556677666544
No 293
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.9e-32 Score=299.53 Aligned_cols=291 Identities=21% Similarity=0.288 Sum_probs=196.0
Q ss_pred CCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCcccc
Q 002826 99 SSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFG 178 (876)
Q Consensus 99 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 178 (876)
.+++.++++++.++. +|..+. ++|++| +|++|++++..+..|+++++|++|+|++|++++..|..|+
T Consensus 31 c~l~~l~~~~~~l~~-lp~~~~--~~l~~L----------~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (330)
T 1xku_A 31 CHLRVVQCSDLGLEK-VPKDLP--PDTALL----------DLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFA 97 (330)
T ss_dssp EETTEEECTTSCCCS-CCCSCC--TTCCEE----------ECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTT
T ss_pred CCCeEEEecCCCccc-cCccCC--CCCeEE----------ECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhc
Confidence 468888888888875 454443 345544 5556666666667788888888888888888877788888
Q ss_pred CCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCcccccccccc
Q 002826 179 NFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLV 258 (876)
Q Consensus 179 ~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~ 258 (876)
++++|++|+|++|+ +..+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++.
T Consensus 98 ~l~~L~~L~Ls~n~--l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-------------- 159 (330)
T 1xku_A 98 PLVKLERLYLSKNQ--LKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS-------------- 159 (330)
T ss_dssp TCTTCCEEECCSSC--CSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG--------------
T ss_pred CCCCCCEEECCCCc--CCccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc--------------
Confidence 88888888888887 556666554 567777777777776666666667777777777776652
Q ss_pred EEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCc
Q 002826 259 SFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNR 338 (876)
Q Consensus 259 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 338 (876)
.+..+..+..+++|++|++++|.++. +|..+. ++|++|++++|++++..|..|..+++|+.|++++|+
T Consensus 160 ---------~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 227 (330)
T 1xku_A 160 ---------SGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 227 (330)
T ss_dssp ---------GGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSC
T ss_pred ---------cCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCc
Confidence 01233334444444444444444442 222222 466666666666666666666667777777777777
Q ss_pred ccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCC------CCccEEEccCCccc
Q 002826 339 FSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDS------PVMSIINLSQNSIS 412 (876)
Q Consensus 339 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~------~~L~~L~Ls~N~l~ 412 (876)
+++..+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..|+.. ..++.|++++|.+.
T Consensus 228 l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 228 ISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp CCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred CceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccc
Confidence 77666667777777777777777777 667777777777777777777777777666543 67888888888886
Q ss_pred c--CCc-CcccccccceEeccCCc
Q 002826 413 G--QIP-ELKKCRKLVSLSLADNS 433 (876)
Q Consensus 413 ~--~~~-~~~~l~~L~~L~Ls~N~ 433 (876)
. ..| .|..+.+++.++|++|+
T Consensus 307 ~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 307 YWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp GGGSCGGGGTTCCCGGGEEC----
T ss_pred ccccCccccccccceeEEEecccC
Confidence 3 333 68888899999998885
No 294
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.9e-33 Score=301.57 Aligned_cols=239 Identities=19% Similarity=0.266 Sum_probs=181.1
Q ss_pred cccchhhhhhcccccCCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCccCHHHHHHHHHHH-hhccCccccceeeEEEe
Q 002826 572 LRVTEHDLVIGMDEKSSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGCQSSKTLKTEVKTL-AKIRHKNIVKVLGFFHS 649 (876)
Q Consensus 572 ~~~~~~~l~~~~~~~~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~ 649 (876)
..+..+++..+|+...+..|.|+||.||+|.. .+++.||+|++.. ...+.+|++++ +..+||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~ 82 (299)
T 3m2w_A 8 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYEN 82 (299)
T ss_dssp CCCBCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred ccCcccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhh
Confidence 34555667777777745444444999999966 5799999999853 35677899988 55589999999999987
Q ss_pred ----CCeEEEEEEcCCCCCHHHHhhcc-CCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCC---CCCe
Q 002826 650 ----DESIFLIYEFLQMGSLGDLICRQ-DFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDA---DFEP 721 (876)
Q Consensus 650 ----~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~---~~~~ 721 (876)
.+..++||||+++|+|.+++.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~ 159 (299)
T 3m2w_A 83 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAIL 159 (299)
T ss_dssp EETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCE
T ss_pred hcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcE
Confidence 67799999999999999999775 34699999999999999999999999 9999999999999997 7899
Q ss_pred EEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHH
Q 002826 722 KLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRK 801 (876)
Q Consensus 722 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 801 (876)
||+|||++..... ..++.++||||+||++|||++|+.||........ ....
T Consensus 160 kl~Dfg~a~~~~~------------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----~~~~ 210 (299)
T 3m2w_A 160 KLTDFGFAKETTG------------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----SPGM 210 (299)
T ss_dssp EECCCTTCEECTT------------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC------------CCS
T ss_pred EEecccccccccc------------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----hHHH
Confidence 9999998754321 2356789999999999999999999976433211 0000
Q ss_pred h-hcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002826 802 I-NITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVKA 851 (876)
Q Consensus 802 ~-~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~~ 851 (876)
. ........... ..+......+.+++.+||+.||++|||+.|+++.
T Consensus 211 ~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 211 KTRIRMGQYEFPN----PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CCSSCTTCCSSCH----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhhccccCCc----hhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0 00000000000 1111234568899999999999999999999973
No 295
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-33 Score=338.26 Aligned_cols=246 Identities=22% Similarity=0.287 Sum_probs=189.9
Q ss_pred chhhhhhcccccCCCCCCCCceEEEEEEeC--CCcEEEEEEEecCCc-cCHHHHHHHHHHHhhccCccccceeeEEEeCC
Q 002826 575 TEHDLVIGMDEKSSAGNGGPFGRVYILSLP--SGELIAVKKLVNFGC-QSSKTLKTEVKTLAKIRHKNIVKVLGFFHSDE 651 (876)
Q Consensus 575 ~~~~l~~~~~~~~~~g~~g~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 651 (876)
..+++..+.|++....+.|+||+||+|... +|+.||||++..... .....+.+|++++++++||||+++++++.+.+
T Consensus 73 ~~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 152 (681)
T 2pzi_A 73 NPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTD 152 (681)
T ss_dssp CTTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEEC
T ss_pred CCCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecC
Confidence 344555444444444444449999999764 689999999865322 23456889999999999999999999998866
Q ss_pred e-----EEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccc
Q 002826 652 S-----IFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDF 726 (876)
Q Consensus 652 ~-----~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~Df 726 (876)
. .|+||||++|++|.+++.. .+++..+..++.||+.||.|||+. +|+||||||+||+++.+ .+||+||
T Consensus 153 ~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DF 225 (681)
T 2pzi_A 153 RHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDL 225 (681)
T ss_dssp TTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCC
T ss_pred CCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEec
Confidence 5 7999999999999987754 689999999999999999999999 99999999999999986 9999999
Q ss_pred cchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchhhHHHHHHHHhhccc
Q 002826 727 ALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAEQAEPAESLDVVKWVRRKINITN 806 (876)
Q Consensus 727 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 806 (876)
|+++..... ....||+.|+|||++.+.. +.++|||||||++|||++|.+||........
T Consensus 226 G~a~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-------------- 284 (681)
T 2pzi_A 226 GAVSRINSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL-------------- 284 (681)
T ss_dssp TTCEETTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC--------------
T ss_pred ccchhcccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc--------------
Confidence 999876432 3345899999999876654 8899999999999999999988764221110
Q ss_pred ccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhcc
Q 002826 807 GAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRP-SMFEVVKALHSLS 856 (876)
Q Consensus 807 ~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-s~~ell~~L~~i~ 856 (876)
. ...+ .......+.+++.+||++||++|| +++++.+.+.++.
T Consensus 285 --~-~~~~-----~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 285 --P-EDDP-----VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp --C-TTCH-----HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred --c-cccc-----ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 0 0000 112234678999999999999999 5777777776653
No 296
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.98 E-value=3.4e-33 Score=314.66 Aligned_cols=233 Identities=18% Similarity=0.130 Sum_probs=172.8
Q ss_pred CCCCCCCCceEEEEEEe-CCCcEEEEEEEecCCc---cCHHHHHHHHHHHhhccC-cccccee-----------------
Q 002826 587 SSAGNGGPFGRVYILSL-PSGELIAVKKLVNFGC---QSSKTLKTEVKTLAKIRH-KNIVKVL----------------- 644 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~~~----------------- 644 (876)
..+|.|| ||+||+|.. .+|+.||||++..... ...+.+++|+.+++.++| +|.....
T Consensus 84 ~~LG~G~-fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 84 TVLGQED-PYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEET-TEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred cccccCC-CEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 4455555 999999974 5799999999874322 235788999999999976 3221111
Q ss_pred ----eEEEe-----CCeEEEEEEcCCCCCHHHHhh------ccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccc
Q 002826 645 ----GFFHS-----DESIFLIYEFLQMGSLGDLIC------RQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVK 709 (876)
Q Consensus 645 ----~~~~~-----~~~~~lv~e~~~~gsL~~~l~------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk 709 (876)
.++.. ....+++|+++ +++|.+++. ..+..+++..+..++.|++.||+|||+. +|+|||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDiK 238 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLR 238 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcc
Confidence 11111 12467777765 569999884 2245688899999999999999999999 99999999
Q ss_pred cCceeeCCCCCeEEccccchhhccccccccccccccccccccCcccc----------CCCCCCCccchHHHHHHHHHHHh
Q 002826 710 SKNILLDADFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYG----------YSKKATAQMDAYSFGVVLLELIT 779 (876)
Q Consensus 710 p~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~SlGv~l~ellt 779 (876)
|+|||++.++.+||+|||+++..+.. .....| +.|+|||++ ....++.++|||||||++|||++
T Consensus 239 p~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt 312 (413)
T 3dzo_A 239 PVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC 312 (413)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred cceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence 99999999999999999998865543 233456 889999988 55568889999999999999999
Q ss_pred CCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002826 780 GRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALRCTSVMPEKRPSMFEVVK 850 (876)
Q Consensus 780 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ell~ 850 (876)
|+.||........ ....+. .....+..+.+++.+||+.||++|||+.|+++
T Consensus 313 g~~Pf~~~~~~~~---------------~~~~~~-----~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 313 ADLPNTDDAALGG---------------SEWIFR-----SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp SSCCCCTTGGGSC---------------SGGGGS-----SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCCcchhhh---------------HHHHHh-----hcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999976443221 000000 00011246889999999999999999777654
No 297
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=6e-33 Score=304.36 Aligned_cols=239 Identities=14% Similarity=0.110 Sum_probs=176.4
Q ss_pred ccccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCc--------cCHHHHHHHHHHHhhcc------------------
Q 002826 583 MDEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGC--------QSSKTLKTEVKTLAKIR------------------ 636 (876)
Q Consensus 583 ~~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~------------------ 636 (876)
|.....+|.|+ ||+||+|+. +|+.||||++..... ...+.+.+|+.++++++
T Consensus 22 y~~~~~lG~G~-~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~ 99 (336)
T 2vuw_A 22 LQRCEKIGEGV-FGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNS 99 (336)
T ss_dssp HHTCEEEEEET-TEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEE
T ss_pred chheeeecccC-ceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcc
Confidence 33444555554 999999987 789999999976432 23378899999999997
Q ss_pred --------CccccceeeEEEe-------------CCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHh
Q 002826 637 --------HKNIVKVLGFFHS-------------DESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYL 695 (876)
Q Consensus 637 --------h~niv~~~~~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~L 695 (876)
||||+++++++.+ .+..|+||||+++|++.+.+.+ ..+++..+..++.||+.||+||
T Consensus 100 ~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 100 VHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAVA 177 (336)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHH
T ss_pred eeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHH
Confidence 4555555555543 6789999999999977666644 4689999999999999999999
Q ss_pred h-ccCCCCccccccccCceeeCCCC--------------------CeEEccccchhhccccccccccccccccccccCcc
Q 002826 696 H-KDYVPHLLHRNVKSKNILLDADF--------------------EPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPE 754 (876)
Q Consensus 696 H-~~~~~~i~H~Dlkp~NIll~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE 754 (876)
| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|||
T Consensus 178 H~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aPE 247 (336)
T 2vuw_A 178 EASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDED 247 (336)
T ss_dssp HHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCSG
T ss_pred HHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccChh
Confidence 9 88 999999999999999876 8999999999876532 235899999999
Q ss_pred ccCCCCCCCccchHHHHHH-HHHHHhCCCCCCCCCcchhhHHHHHHHHhhcccccccccChhhhhhcHHHHHHHHHHHHH
Q 002826 755 YGYSKKATAQMDAYSFGVV-LLELITGRQAEQAEPAESLDVVKWVRRKINITNGAIQVLDPKIANCYQQQMLGALEIALR 833 (876)
Q Consensus 755 ~~~~~~~~~~~Dv~SlGv~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~li~~ 833 (876)
++.+.. +.++||||+|++ .+++++|..||....... ...+........ . ...........+.++.+++.+
T Consensus 248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~----~---~~~~~~~~~~~s~~~~dli~~ 318 (336)
T 2vuw_A 248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLH-YLTDKMLKQMTF----K---TKCNTPAMKQIKRKIQEFHRT 318 (336)
T ss_dssp GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHH-HHHHHHHHTCCC----S---SCCCSHHHHHHHHHHHHHHHH
T ss_pred hhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhh-HHHHhhhhhhcc----C---cccchhhhhhcCHHHHHHHHH
Confidence 988665 889999998777 788899998874211000 011111100000 0 011112334566789999999
Q ss_pred ccCCCCCCCCCHHHHH
Q 002826 834 CTSVMPEKRPSMFEVV 849 (876)
Q Consensus 834 cl~~dP~~RPs~~ell 849 (876)
||+.| |++|++
T Consensus 319 ~L~~d-----sa~e~l 329 (336)
T 2vuw_A 319 MLNFS-----SATDLL 329 (336)
T ss_dssp GGGSS-----SHHHHH
T ss_pred HhccC-----CHHHHH
Confidence 99976 999988
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.9e-35 Score=339.10 Aligned_cols=349 Identities=19% Similarity=0.223 Sum_probs=218.6
Q ss_pred EEEEeecCCCCCccccccc-ccCCCCCCeeecCCCcccc----ccCccccCCCCCCcccCCCcccceeecCCccccccCC
Q 002826 76 TVASINLQSLNLSGEISSS-VCELSSLSNLNLADNLFNQ----PIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIP 150 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~-~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p 150 (876)
++..+++++++++...... +..+++|++|+|++|.++. .++..+..+++|++|+|++|.| ++..+
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l----------~~~~~ 73 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNEL----------GDVGV 73 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCC----------HHHHH
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcC----------ChHHH
Confidence 6778888888887654433 7788889999999998875 3567788888888876665544 33222
Q ss_pred Ccc-CCcc----ccceecccccccCC----CcCccccCCCcceEEEccCCCCcCCCCCCcc-----cccCcccEEEecCC
Q 002826 151 ESI-GSLV----NLQVLNLGSNLLSG----SVPFVFGNFSELVVLDLSQNAYLISEIPSDI-----GKLEKLEQLFLQSS 216 (876)
Q Consensus 151 ~~~-~~l~----~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~-----~~l~~L~~L~L~~n 216 (876)
..+ ..++ +|++|+|++|+++. .++..|.++++|++|+|++|++ ....+..+ ...++|++|+|++|
T Consensus 74 ~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i-~~~~~~~l~~~l~~~~~~L~~L~L~~n 152 (461)
T 1z7x_W 74 HCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLL-GDAGLQLLCEGLLDPQCRLEKLQLEYC 152 (461)
T ss_dssp HHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBC-HHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcC-chHHHHHHHHHHhcCCCcceEEECCCC
Confidence 222 2233 68899999998874 4578888888899999988873 21112222 22457888888888
Q ss_pred CCcccC----CccccCCCCCcEEecccCccCCCCCCcccc----ccccccEEEeccccccCc----CCcccccCCcccee
Q 002826 217 GFHGVI----PDSFVGLQSLSILDLSQNNLTGEVPQSLGS----SLLKLVSFDVSQNKLSGS----FPNGICKANGLVNL 284 (876)
Q Consensus 217 ~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~----~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L 284 (876)
++++.. +..+..+++|++|+|++|.++...+..+.. ..++|++|+|++|++++. ++..+..+++|++|
T Consensus 153 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L 232 (461)
T 1z7x_W 153 SLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLREL 232 (461)
T ss_dssp CCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEE
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEE
Confidence 887643 555666788888888888877433333322 244788888888888753 46666777888888
Q ss_pred eeecccccccC-----CCCCccccccceeecccccCCCC----CCcccCCCCcccEEEecCCcccccCccccccC-----
Q 002826 285 SLHKNFFNGSI-----PGSINECLNLERFQVQDNGFSGD----FPDKLWSLPRIKLIRAESNRFSGAIPDSISMA----- 350 (876)
Q Consensus 285 ~L~~N~i~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l----- 350 (876)
+|++|.+++.. +..+..+++|++|++++|++++. ++..+..+++|+.|++++|++++..+..+...
T Consensus 233 ~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~ 312 (461)
T 1z7x_W 233 ALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPG 312 (461)
T ss_dssp ECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTT
T ss_pred eccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCC
Confidence 88888776432 22233466777777777777643 45556666777777777777765544444322
Q ss_pred CCCCeeeccCcccCCC----CCCccccccCccEEeCCCccccCCCCCCcCC-----CCCccEEEccCCcccc----CCc-
Q 002826 351 AQLEQVQIDNNRFTSS----IPQGLGSVKSLYRFSASQNSFYGSLPPNFCD-----SPVMSIINLSQNSISG----QIP- 416 (876)
Q Consensus 351 ~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-----~~~L~~L~Ls~N~l~~----~~~- 416 (876)
++|++|++++|.+++. ++..+..+++|++|++++|.+++..+..++. .+.|+.|+|++|++++ .++
T Consensus 313 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 392 (461)
T 1z7x_W 313 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 392 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred ccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHH
Confidence 4666666666666644 3344444555666655555555433332221 3445555555555542 222
Q ss_pred CcccccccceEeccCCcCC
Q 002826 417 ELKKCRKLVSLSLADNSLT 435 (876)
Q Consensus 417 ~~~~l~~L~~L~Ls~N~l~ 435 (876)
.+..+++|++|+|++|+++
T Consensus 393 ~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 393 TLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHCCCCCEEECCSSSCC
T ss_pred HHHhCCCccEEECCCCCCC
Confidence 3444455555555555544
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=7.6e-36 Score=342.45 Aligned_cols=355 Identities=16% Similarity=0.150 Sum_probs=238.9
Q ss_pred CCCCeeecCCCccccccCcc-ccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCccc
Q 002826 99 SSLSNLNLADNLFNQPIPLH-LSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVF 177 (876)
Q Consensus 99 ~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 177 (876)
++|++|||++|+++...... +..+++|++|+|++|.+.... . ..++..+..+++|++|+|++|++++..+..+
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~-----~-~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l 76 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEAR-----C-KDISSALRVNPALAELNLRSNELGDVGVHCV 76 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHH-----H-HHHHHHHHTCTTCCEEECTTCCCHHHHHHHH
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHH-----H-HHHHHHHHhCCCcCEEeCCCCcCChHHHHHH
Confidence 56788999998887654433 778888887766655432100 0 1345667778888899998888875444333
Q ss_pred -cCCC----cceEEEccCCCCcC---CCCCCcccccCcccEEEecCCCCcccCCcccc-----CCCCCcEEecccCccCC
Q 002826 178 -GNFS----ELVVLDLSQNAYLI---SEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFV-----GLQSLSILDLSQNNLTG 244 (876)
Q Consensus 178 -~~l~----~L~~L~Ls~N~~~~---~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~ 244 (876)
..++ +|++|+|++|++.. ..+|..+..+++|++|+|++|++++..+..+. ..++|++|+|++|++++
T Consensus 77 ~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~ 156 (461)
T 1z7x_W 77 LQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSA 156 (461)
T ss_dssp HHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG
T ss_pred HHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCH
Confidence 3455 68888888887321 13466777888888888888888754443332 25578888888888874
Q ss_pred CC----CCccccccccccEEEeccccccCcCCccccc-----CCccceeeeeccccccc----CCCCCccccccceeecc
Q 002826 245 EV----PQSLGSSLLKLVSFDVSQNKLSGSFPNGICK-----ANGLVNLSLHKNFFNGS----IPGSINECLNLERFQVQ 311 (876)
Q Consensus 245 ~i----p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~ 311 (876)
.. +.. +..+++|++|+|++|++++..+..+.. .++|++|+|++|.+++. ++..+..+++|++|+++
T Consensus 157 ~~~~~l~~~-l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls 235 (461)
T 1z7x_W 157 ASCEPLASV-LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALG 235 (461)
T ss_dssp GGHHHHHHH-HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECC
T ss_pred HHHHHHHHH-HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEecc
Confidence 32 222 234678888888888877554444432 55788888888887753 35566677888888888
Q ss_pred cccCCCCC-----CcccCCCCcccEEEecCCccccc----CccccccCCCCCeeeccCcccCCCCCCccccc-----cCc
Q 002826 312 DNGFSGDF-----PDKLWSLPRIKLIRAESNRFSGA----IPDSISMAAQLEQVQIDNNRFTSSIPQGLGSV-----KSL 377 (876)
Q Consensus 312 ~N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L 377 (876)
+|.+++.. +..+..+++|+.|++++|++++. ++..+..+++|++|++++|++++..+..+... ++|
T Consensus 236 ~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L 315 (461)
T 1z7x_W 236 SNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQL 315 (461)
T ss_dssp SSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCC
T ss_pred CCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccc
Confidence 88776532 22333577888888888887764 46666677788888888887765444333332 577
Q ss_pred cEEeCCCccccCC----CCCCcCCCCCccEEEccCCccccCCc-Cccc-----ccccceEeccCCcCCC----CCCcCCC
Q 002826 378 YRFSASQNSFYGS----LPPNFCDSPVMSIINLSQNSISGQIP-ELKK-----CRKLVSLSLADNSLTG----EIPPSLA 443 (876)
Q Consensus 378 ~~L~ls~N~l~~~----~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~ 443 (876)
+.|++++|.+++. ++..+..+++|+.|+|++|.+++..+ .+.. .++|++|+|++|++++ .+|..+.
T Consensus 316 ~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~ 395 (461)
T 1z7x_W 316 ESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLL 395 (461)
T ss_dssp CEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHH
T ss_pred eeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHH
Confidence 8888888877654 34555566778888888887765432 2322 5677888888887775 5677777
Q ss_pred CCCCcceeeCCCCcccc
Q 002826 444 ELPVLTYLDLSDNNLTG 460 (876)
Q Consensus 444 ~l~~L~~L~Ls~N~l~~ 460 (876)
.+++|++||+++|++++
T Consensus 396 ~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 396 ANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HCCCCCEEECCSSSCCH
T ss_pred hCCCccEEECCCCCCCH
Confidence 77778888888887764
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.4e-31 Score=293.69 Aligned_cols=175 Identities=23% Similarity=0.252 Sum_probs=96.5
Q ss_pred ecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCc-ccccCcccEEEecCCC
Q 002826 139 DLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSD-IGKLEKLEQLFLQSSG 217 (876)
Q Consensus 139 dL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~-~~~l~~L~~L~L~~n~ 217 (876)
||++|++++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|+ +..+|.. |.++++|++|+|++|+
T Consensus 58 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~--l~~~~~~~~~~l~~L~~L~L~~n~ 135 (353)
T 2z80_A 58 DLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNY--LSNLSSSWFKPLSSLTFLNLLGNP 135 (353)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC--CSSCCHHHHTTCTTCSEEECTTCC
T ss_pred ECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCc--CCcCCHhHhCCCccCCEEECCCCC
Confidence 444445555555677888888888888888887777778888888888888876 4455544 5555556666665555
Q ss_pred CcccCC-ccccCCCCCcEEecccCc-cCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccC
Q 002826 218 FHGVIP-DSFVGLQSLSILDLSQNN-LTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSI 295 (876)
Q Consensus 218 l~~~~~-~~~~~l~~L~~L~Ls~N~-l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 295 (876)
++++.+ ..|.++++|++|++++|+ ++ .++...+..+++|++|++++|++++..|..+..+++|++|++++|.++...
T Consensus 136 l~~l~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~ 214 (353)
T 2z80_A 136 YKTLGETSLFSHLTKLQILRVGNMDTFT-KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLL 214 (353)
T ss_dssp CSSSCSSCSCTTCTTCCEEEEEESSSCC-EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHH
T ss_pred CcccCchhhhccCCCCcEEECCCCcccc-ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccch
Confidence 554433 345555555555555553 33 333333334455555555555554444444444444444444444443222
Q ss_pred CCCCccccccceeecccccCC
Q 002826 296 PGSINECLNLERFQVQDNGFS 316 (876)
Q Consensus 296 ~~~~~~l~~L~~L~L~~N~l~ 316 (876)
+..+..+++|++|++++|.++
T Consensus 215 ~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 215 EIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp HHHHHHTTTEEEEEEESCBCT
T ss_pred hhhhhhcccccEEECCCCccc
Confidence 222223334444444444443
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2.4e-31 Score=287.56 Aligned_cols=286 Identities=19% Similarity=0.226 Sum_probs=189.5
Q ss_pred CCccccceEecCCCCCccEEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccce
Q 002826 58 HYCNWTGVTCVTTATASLTVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWV 137 (876)
Q Consensus 58 ~~C~w~gv~c~~~~~~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 137 (876)
..|.|.+|.|...+.. .+|..+. ++|++|+|++|+++...+..|+++++|++|+|++|.|+.
T Consensus 5 C~C~~~~l~c~~~~l~----------------~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 66 (306)
T 2z66_A 5 CSCSGTEIRCNSKGLT----------------SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSF 66 (306)
T ss_dssp CEEETTEEECCSSCCS----------------SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCE
T ss_pred CeeCCCEEEcCCCCcc----------------cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCc
Confidence 4599999999765321 2333332 588999999999987666678888888888777666532
Q ss_pred eecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCC--CcccccCcccEEEecC
Q 002826 138 LDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIP--SDIGKLEKLEQLFLQS 215 (876)
Q Consensus 138 LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p--~~~~~l~~L~~L~L~~ 215 (876)
+ +..|..+..+++|++|+|++|.++ .+|..|.++++|++|+|++|+ +..++ ..+..+++|++|++++
T Consensus 67 ~--------~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~--l~~~~~~~~~~~l~~L~~L~l~~ 135 (306)
T 2z66_A 67 K--------GCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSN--LKQMSEFSVFLSLRNLIYLDISH 135 (306)
T ss_dssp E--------EEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSE--EESSTTTTTTTTCTTCCEEECTT
T ss_pred c--------cCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCc--ccccccchhhhhccCCCEEECCC
Confidence 2 233556667888888888888887 566678888888888888887 44444 3577777777777777
Q ss_pred CCCcccCCccccCCCCCcEEecccCccCC-CCCCccccccccccEEEeccccccCcCCcccccCCccceeeeeccccccc
Q 002826 216 SGFHGVIPDSFVGLQSLSILDLSQNNLTG-EVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGS 294 (876)
Q Consensus 216 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 294 (876)
|++.+..+..|.++++|++|+|++|++++ .+|..+ ..+++|++|+|++|++++..|..+..+++|++|+|++|++++.
T Consensus 136 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 214 (306)
T 2z66_A 136 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF-TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 214 (306)
T ss_dssp SCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCC-TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBC
T ss_pred CcCCccchhhcccCcCCCEEECCCCccccccchhHH-hhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCcc
Confidence 77777777777777777777777777764 244433 4467777777777777766666666677777777777777666
Q ss_pred CCCCCccccccceeecccccCCCCCCcccCCCC-cccEEEecCCcccccCc--cccccCCCCCeeeccCcccCCCCCCcc
Q 002826 295 IPGSINECLNLERFQVQDNGFSGDFPDKLWSLP-RIKLIRAESNRFSGAIP--DSISMAAQLEQVQIDNNRFTSSIPQGL 371 (876)
Q Consensus 295 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~p~~~ 371 (876)
.+..|..+++|++|++++|++++..|..+..++ +|+.|++++|.+++..+ .....+...+.+.+..+.+....|..+
T Consensus 215 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~ 294 (306)
T 2z66_A 215 DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDK 294 (306)
T ss_dssp CSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGG
T ss_pred ChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhh
Confidence 555666666666666666666666666666663 66666666666654321 111122233334444455554444444
Q ss_pred cc
Q 002826 372 GS 373 (876)
Q Consensus 372 ~~ 373 (876)
.+
T Consensus 295 ~g 296 (306)
T 2z66_A 295 QG 296 (306)
T ss_dssp TT
T ss_pred CC
Confidence 33
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.1e-30 Score=288.29 Aligned_cols=282 Identities=20% Similarity=0.196 Sum_probs=220.0
Q ss_pred CccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCC-cccccCcccEEEecCCCCcccCCccccCCCCCc
Q 002826 155 SLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPS-DIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLS 233 (876)
Q Consensus 155 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 233 (876)
..+...+.++++|.++ .+|..+. ++|++|+|++|+ +..+|. .|.++++|++|+|++|++++..|..|.++++|+
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~--i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNR--ITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLE 103 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSC--CCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCc--CcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCC
Confidence 4455567889999998 5665554 489999999998 555655 688899999999999999988888899999999
Q ss_pred EEecccCccCCCCCCccccccccccEEEeccccccCcCC-cccccCCccceeeeecc-cccccCCCCCccccccceeecc
Q 002826 234 ILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFP-NGICKANGLVNLSLHKN-FFNGSIPGSINECLNLERFQVQ 311 (876)
Q Consensus 234 ~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~L~ 311 (876)
+|+|++|+|+ .+|...+..+++|++|+|++|++++..+ ..+..+++|++|++++| .+++..+..|.++++|++|+++
T Consensus 104 ~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 182 (353)
T 2z80_A 104 HLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEID 182 (353)
T ss_dssp EEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEE
T ss_pred EEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECC
Confidence 9999999998 6777656678899999999999985544 47888899999999988 5777777888888888888888
Q ss_pred cccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCC
Q 002826 312 DNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSL 391 (876)
Q Consensus 312 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 391 (876)
+|++++..|..+..+++|+.|++++|+++...+..+..+++|++|++++|++++..+..+..
T Consensus 183 ~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~------------------ 244 (353)
T 2z80_A 183 ASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST------------------ 244 (353)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC----------------------
T ss_pred CCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc------------------
Confidence 88888888888888888888888888887655555566788888888888887654443321
Q ss_pred CCCcCCCCCccEEEccCCcccc-----CCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCC
Q 002826 392 PPNFCDSPVMSIINLSQNSISG-----QIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIP 463 (876)
Q Consensus 392 ~~~~~~~~~L~~L~Ls~N~l~~-----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 463 (876)
......++.++|++|.+++ .++.+..+++|++|+|++|+++...+..|..+++|++|+|++|++++..|
T Consensus 245 ---~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 245 ---GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp -----CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ---ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 1123446666777777665 23368889999999999999995544557999999999999999987554
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.1e-30 Score=282.34 Aligned_cols=164 Identities=18% Similarity=0.239 Sum_probs=86.2
Q ss_pred CCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCC-CCCCccccccCccEEeCCCccccCCCCCCcCCCCCccE
Q 002826 325 SLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTS-SIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSI 403 (876)
Q Consensus 325 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~ 403 (876)
.+++|++|++++|++++..+..+..+++|++|++++|++++ ..|..+..+++|+.|++++|++++..|..|..+++|+.
T Consensus 124 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 203 (306)
T 2z66_A 124 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 203 (306)
T ss_dssp TCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred hccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCE
Confidence 33333333333333333333334444444444444444443 24444445555555555555555555555555556666
Q ss_pred EEccCCccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCC-CcceeeCCCCcccccCCC--ccccc-ccceEEccC
Q 002826 404 INLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELP-VLTYLDLSDNNLTGPIPQ--GLQNL-KLALFNVSF 478 (876)
Q Consensus 404 L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~--~~~~l-~l~~l~ls~ 478 (876)
|+|++|++++.++ .+..+++|++|+|++|++++..|..+..++ +|++|+|++|++++..+. ....+ ....+.+..
T Consensus 204 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~ 283 (306)
T 2z66_A 204 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEV 283 (306)
T ss_dssp EECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCG
T ss_pred EECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccc
Confidence 6666666665554 566667777777777777767777777764 777777777777653221 11111 122344455
Q ss_pred CccccccCCc
Q 002826 479 NKLSGRVPYS 488 (876)
Q Consensus 479 N~l~~~~p~~ 488 (876)
|.+.+..|..
T Consensus 284 ~~~~C~~p~~ 293 (306)
T 2z66_A 284 ERMECATPSD 293 (306)
T ss_dssp GGCBEEESGG
T ss_pred cccccCCchh
Confidence 6666655543
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.7e-29 Score=286.80 Aligned_cols=244 Identities=15% Similarity=0.158 Sum_probs=148.8
Q ss_pred CcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecc
Q 002826 232 LSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQ 311 (876)
Q Consensus 232 L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 311 (876)
...++.+++.++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|.|+++.+..|.++++|++|+|+
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CcEEEECCCCcC-ccCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 345666666666 5665543 456666666666666666666666666666666666666666666666666666666
Q ss_pred cccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccC-cccCCCCCCccccccCccEEeCCCccccCC
Q 002826 312 DNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDN-NRFTSSIPQGLGSVKSLYRFSASQNSFYGS 390 (876)
Q Consensus 312 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 390 (876)
+|++++..+..|..+++|++|+|++|++++..+..|..+++|++|++++ |.++...+..|.++++|+.|++++|++++.
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 6666655555666666666666666666666566666666666666666 334333333466666666666666666543
Q ss_pred CCCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccc
Q 002826 391 LPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL 469 (876)
Q Consensus 391 ~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 469 (876)
| .+..+++|+.|+|++|++++..+ .|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..+..+
T Consensus 212 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 -P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp -C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred -c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 2 35566666666666666666555 56666666666666666666666666666666666666666665444444444
Q ss_pred -ccceEEccCCcc
Q 002826 470 -KLALFNVSFNKL 481 (876)
Q Consensus 470 -~l~~l~ls~N~l 481 (876)
+++.|++++|++
T Consensus 290 ~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 290 RYLVELHLHHNPW 302 (452)
T ss_dssp TTCCEEECCSSCE
T ss_pred cCCCEEEccCCCc
Confidence 244444444443
No 305
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.2e-29 Score=271.23 Aligned_cols=254 Identities=19% Similarity=0.206 Sum_probs=128.2
Q ss_pred eEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEec
Q 002826 184 VVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVS 263 (876)
Q Consensus 184 ~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~ 263 (876)
++++++++. +..+|..+ .++|++|+|++|+++++.+..|.++++|++|+|++|++++..|.. +..+++|++|+|+
T Consensus 14 ~~~~c~~~~--l~~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~ 88 (285)
T 1ozn_A 14 VTTSCPQQG--LQAVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAA-FTGLALLEQLDLS 88 (285)
T ss_dssp CEEECCSSC--CSSCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTT-TTTCTTCCEEECC
T ss_pred eEEEcCcCC--cccCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhh-cCCccCCCEEeCC
Confidence 344444443 33444332 234555555555555555555555555555555555555222222 2335555555555
Q ss_pred ccc-ccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCccccc
Q 002826 264 QNK-LSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGA 342 (876)
Q Consensus 264 ~N~-l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 342 (876)
+|+ ++...|..|..+++|++|++++|.+++..+..|..+++|++|++++|++++..+..|..+++|+.|++++|++++.
T Consensus 89 ~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 89 DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV 168 (285)
T ss_dssp SCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccccc
Confidence 554 4444445555555555555555555555555555555555555555555544444555555555555555555555
Q ss_pred CccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCcCccccc
Q 002826 343 IPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCR 422 (876)
Q Consensus 343 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~ 422 (876)
.+..|..+++|++|++++|++++..|..+.++++|+.|++++|++++..+..|..+++|+.|++++|.+....+......
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~ 248 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWA 248 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHH
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHH
Confidence 55455555555555555555555555555555555555555555554444445555555555555555543332111122
Q ss_pred ccceEeccCCcCCCCCCcCC
Q 002826 423 KLVSLSLADNSLTGEIPPSL 442 (876)
Q Consensus 423 ~L~~L~Ls~N~l~~~~p~~~ 442 (876)
.++.+..+.|.+....|..+
T Consensus 249 ~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp HHHHCCSEECCCBEEESGGG
T ss_pred HHHhcccccCccccCCchHh
Confidence 33333444444444444433
No 306
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.4e-29 Score=268.80 Aligned_cols=252 Identities=19% Similarity=0.189 Sum_probs=204.6
Q ss_pred cEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeeccc
Q 002826 233 SILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQD 312 (876)
Q Consensus 233 ~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 312 (876)
++++.+++.++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|..+++|++|++++
T Consensus 14 ~~~~c~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 57788888887 777654 35788888888888877777788888888888888888888888888888888888888
Q ss_pred cc-CCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCC
Q 002826 313 NG-FSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSL 391 (876)
Q Consensus 313 N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 391 (876)
|. ++...|..|..+++|++|++++|++++..|..+..+++|++|++++|++++..+..+..+++|+.|++++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 87 77777888888888888888888888888888888888999999999888777777888889999999999988877
Q ss_pred CCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCcccccc
Q 002826 392 PPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNLK 470 (876)
Q Consensus 392 ~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 470 (876)
+..|..+++|+.|+|++|++++..+ .+..+++|++|+|++|++++..+..|..+++|++|+|++|++....+..-..-.
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~ 249 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAW 249 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHH
Confidence 7788889999999999999988766 788899999999999999987778899999999999999998854332100002
Q ss_pred cceEEccCCccccccCCc
Q 002826 471 LALFNVSFNKLSGRVPYS 488 (876)
Q Consensus 471 l~~l~ls~N~l~~~~p~~ 488 (876)
++.+..+.|.+.+..|..
T Consensus 250 l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 250 LQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HHHCCSEECCCBEEESGG
T ss_pred HHhcccccCccccCCchH
Confidence 344556777777777754
No 307
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=6.7e-31 Score=301.93 Aligned_cols=233 Identities=17% Similarity=0.161 Sum_probs=147.5
Q ss_pred cccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeee
Q 002826 207 KLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSL 286 (876)
Q Consensus 207 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 286 (876)
+|++|+|++|++++..|..|.++++|++|+|++|.|++..| +..+++|++|+|++|+|++..+ .++|++|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE---CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc---cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 56666666666666666666666666666666666664333 3345666666666666553221 244555555
Q ss_pred ecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCC
Q 002826 287 HKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSS 366 (876)
Q Consensus 287 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 366 (876)
++|.|++..+.. +++|+.|++++|++++..|..+..+++|++|+|++|++++.
T Consensus 107 ~~N~l~~~~~~~---------------------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (487)
T 3oja_A 107 ANNNISRVSCSR---------------------------GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (487)
T ss_dssp CSSCCCCEEECC---------------------------CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEE
T ss_pred cCCcCCCCCccc---------------------------cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCc
Confidence 555554433322 34455555555555555555555555566666666666555
Q ss_pred CCCccc-cccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCC
Q 002826 367 IPQGLG-SVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAEL 445 (876)
Q Consensus 367 ~p~~~~-~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 445 (876)
+|..+. .+++|+.|+|++|.+++..+ +..+++|+.|+|++|.|++.++.+..+++|+.|+|++|+|++ +|..+..+
T Consensus 160 ~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l 236 (487)
T 3oja_A 160 NFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (487)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred ChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccC
Confidence 555554 45666666666666665532 234778888888888888887788888999999999999984 67778889
Q ss_pred CCcceeeCCCCccc-ccCCCccccc-ccceEEcc
Q 002826 446 PVLTYLDLSDNNLT-GPIPQGLQNL-KLALFNVS 477 (876)
Q Consensus 446 ~~L~~L~Ls~N~l~-~~~p~~~~~l-~l~~l~ls 477 (876)
++|+.|++++|.+. +.+|..+..+ .+..++++
T Consensus 237 ~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 99999999999987 5566665554 24444443
No 308
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.9e-30 Score=281.06 Aligned_cols=260 Identities=19% Similarity=0.200 Sum_probs=147.3
Q ss_pred ccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCC
Q 002826 152 SIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQS 231 (876)
Q Consensus 152 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 231 (876)
.++..++|++|++++|.+ .+|..+... |+.|+|++|++....+|..+.. ..-.+.++++
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~-----------------~~~~~~~l~~ 96 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILF-----------------GALRVLGISG 96 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHH-----------------HHHHHHTTSC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHH-----------------HHHHhcCcCC
Confidence 345566677777777777 455444432 6666666665222222322220 0000114566
Q ss_pred CcEEecccCccCCCCCCccc-cccccccEEEeccccccCcCCcccccC-----CccceeeeecccccccCCCCCcccccc
Q 002826 232 LSILDLSQNNLTGEVPQSLG-SSLLKLVSFDVSQNKLSGSFPNGICKA-----NGLVNLSLHKNFFNGSIPGSINECLNL 305 (876)
Q Consensus 232 L~~L~Ls~N~l~~~ip~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~i~~~~~~~~~~l~~L 305 (876)
|++|+|++|++++.+|..++ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|+|++..|..|..+++|
T Consensus 97 L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L 175 (312)
T 1wwl_A 97 LQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPAL 175 (312)
T ss_dssp CCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSC
T ss_pred ccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCC
Confidence 66666666666666665543 4566666666666666655 5555555 667777777777766666667777777
Q ss_pred ceeecccccCCCC--CCccc--CCCCcccEEEecCCcccc---cCccccccCCCCCeeeccCcccCCCCCCccccccCcc
Q 002826 306 ERFQVQDNGFSGD--FPDKL--WSLPRIKLIRAESNRFSG---AIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLY 378 (876)
Q Consensus 306 ~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 378 (876)
++|++++|++.+. .|..+ ..+++|+.|++++|++++ .....+..+++|++|+|++|++++.+|.
T Consensus 176 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--------- 246 (312)
T 1wwl_A 176 STLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGA--------- 246 (312)
T ss_dssp CEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCC---------
T ss_pred CEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccch---------
Confidence 7777777766543 22222 556666666666666652 1223334555566666666666544431
Q ss_pred EEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcc
Q 002826 379 RFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNL 458 (876)
Q Consensus 379 ~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 458 (876)
..+..+++|++|+|++|+|+..+..+. ++|++|+|++|+|++. |. +..+++|++|+|++|++
T Consensus 247 --------------~~~~~l~~L~~L~Ls~N~l~~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l 308 (312)
T 1wwl_A 247 --------------PSCDWPSQLNSLNLSFTGLKQVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPF 308 (312)
T ss_dssp --------------SCCCCCTTCCEEECTTSCCSSCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTT
T ss_pred --------------hhhhhcCCCCEEECCCCccChhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCC
Confidence 223334455555555555553333333 6677777777777655 44 67777777777777777
Q ss_pred cc
Q 002826 459 TG 460 (876)
Q Consensus 459 ~~ 460 (876)
++
T Consensus 309 ~~ 310 (312)
T 1wwl_A 309 LD 310 (312)
T ss_dssp TC
T ss_pred CC
Confidence 64
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2e-28 Score=278.69 Aligned_cols=248 Identities=20% Similarity=0.218 Sum_probs=162.2
Q ss_pred cceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEE
Q 002826 182 ELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFD 261 (876)
Q Consensus 182 ~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~ 261 (876)
+...++.+++. +..+|..+. ++++.|+|++|+++++.+..|.++++|++|+|++|+|+ .++...+.++++|++|+
T Consensus 44 ~~~~v~c~~~~--l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~ 118 (440)
T 3zyj_A 44 QFSKVICVRKN--LREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLANLNTLE 118 (440)
T ss_dssp TSCEEECCSCC--CSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCC-EECGGGGTTCSSCCEEE
T ss_pred CCCEEEeCCCC--cCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCC-ccChhhccCCccCCEEE
Confidence 35567777765 566776654 46666777777776666666666666777777666666 44444444566666666
Q ss_pred eccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccc
Q 002826 262 VSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSG 341 (876)
Q Consensus 262 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 341 (876)
|++|+|++..+..|..+++|++|+|++|.|+.+.+..|..+++|++|++++| |.+..
T Consensus 119 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~-----------------------~~l~~ 175 (440)
T 3zyj_A 119 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL-----------------------KRLSY 175 (440)
T ss_dssp CCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC-----------------------TTCCE
T ss_pred CCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCC-----------------------CCcce
Confidence 6666666544445555555555555555555444445555555555555442 23333
Q ss_pred cCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCc-Cccc
Q 002826 342 AIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIP-ELKK 420 (876)
Q Consensus 342 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~ 420 (876)
..+..|..+++|++|+|++|+++ .+| .+..+++|+.|++++|++++..|..|.++++|+.|+|++|+|++..+ .|..
T Consensus 176 i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 253 (440)
T 3zyj_A 176 ISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDN 253 (440)
T ss_dssp ECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTT
T ss_pred eCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcC
Confidence 33345555566666666666665 333 35666777777777777777777777777777777888888777666 6778
Q ss_pred ccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCccc
Q 002826 421 CRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLT 459 (876)
Q Consensus 421 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 459 (876)
+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 254 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 254 LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 888888888888888777778888888888888888876
No 310
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=6.4e-31 Score=285.49 Aligned_cols=279 Identities=16% Similarity=0.154 Sum_probs=173.1
Q ss_pred CCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccc
Q 002826 125 LETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGK 204 (876)
Q Consensus 125 L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~ 204 (876)
+.++.+.+|.+..++++.+.+....+..+..+++|++|+|++|++++..|..|.++++|++|+|++|+ +..+++ +..
T Consensus 2 i~~l~~~g~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~--l~~~~~-~~~ 78 (317)
T 3o53_A 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNV--LYETLD-LES 78 (317)
T ss_dssp CCEEEEETTEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSC--CEEEEE-ETT
T ss_pred cccccCCcCceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCc--CCcchh-hhh
Confidence 34566666777777888888876666667778888999999998888777888888888888888887 222322 666
Q ss_pred cCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCcccee
Q 002826 205 LEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNL 284 (876)
Q Consensus 205 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 284 (876)
+++|++|+|++|++++.. ..++|++|++++|+|+ .++.. .+++|++|++++|++++..+..+..+++|++|
T Consensus 79 l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~-~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 149 (317)
T 3o53_A 79 LSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNIS-RVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYL 149 (317)
T ss_dssp CTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCS-EEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEE
T ss_pred cCCCCEEECcCCcccccc-----CCCCcCEEECCCCccC-CcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEE
Confidence 666666666666666432 2256666666666666 33322 13455555555555555444455555555555
Q ss_pred eeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccC
Q 002826 285 SLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFT 364 (876)
Q Consensus 285 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 364 (876)
+|++|.+++..+..+. ..+++|++|++++|++++..+ ...+++|++|+|++|+++
T Consensus 150 ~Ls~N~l~~~~~~~~~-----------------------~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~ 204 (317)
T 3o53_A 150 DLKLNEIDTVNFAELA-----------------------ASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLA 204 (317)
T ss_dssp ECTTSCCCEEEGGGGG-----------------------GGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCC
T ss_pred ECCCCCCCcccHHHHh-----------------------hccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCC
Confidence 5555555444333332 234555555555555554321 123556666666666666
Q ss_pred CCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccc-cCCc-CcccccccceEecc-CCcCCCCCCcC
Q 002826 365 SSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSIS-GQIP-ELKKCRKLVSLSLA-DNSLTGEIPPS 441 (876)
Q Consensus 365 ~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~-~~~~-~~~~l~~L~~L~Ls-~N~l~~~~p~~ 441 (876)
+ +|..+..+++|+.|++++|++++ +|..+..+++|+.|++++|.++ +.++ .+..+++|+.|+++ .+.+++..|..
T Consensus 205 ~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 205 F-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp E-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred c-chhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 3 33346666666666666666663 4556677777777777777777 4444 57778888888888 44466655544
Q ss_pred C
Q 002826 442 L 442 (876)
Q Consensus 442 ~ 442 (876)
.
T Consensus 283 ~ 283 (317)
T 3o53_A 283 C 283 (317)
T ss_dssp C
T ss_pred c
Confidence 3
No 311
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.1e-28 Score=268.81 Aligned_cols=224 Identities=18% Similarity=0.242 Sum_probs=119.6
Q ss_pred ccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEec
Q 002826 158 NLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDL 237 (876)
Q Consensus 158 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 237 (876)
++++|+|++|+++ .+|..+.++++|++|+|++|. +..+|..++++++|++|+|++|+++ .+|..|.++++|++|+|
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~--l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAG--LMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSC--CCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCC--ccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 3444444444444 333334444444444444444 2244444444444555555555555 34555555566666666
Q ss_pred ccCccCCCCCCccc--------cccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceee
Q 002826 238 SQNNLTGEVPQSLG--------SSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQ 309 (876)
Q Consensus 238 s~N~l~~~ip~~~~--------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 309 (876)
++|++.+.+|..+. .++++|++|+|++|+++ .+|..+..+++|++|+|++|.+++ +|..|..+++|++|+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELD 235 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEE
Confidence 66555555555442 23666666666666666 555566666666666666666663 333455555566666
Q ss_pred cccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccc
Q 002826 310 VQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSF 387 (876)
Q Consensus 310 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 387 (876)
+++|.+.+.+|..+.++++|+.|++++|++.+.+|..+..+++|++|+|++|++.+.+|..++++++|+.+++..|.+
T Consensus 236 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp CTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred CcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 665555555555555555555555555555555555555555555555555555555555555555555554444433
No 312
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2.7e-28 Score=285.82 Aligned_cols=265 Identities=26% Similarity=0.315 Sum_probs=178.5
Q ss_pred ceeecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecC
Q 002826 136 WVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQS 215 (876)
Q Consensus 136 ~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~ 215 (876)
+.|++++|+++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+ ++.+|. .+++|++|+|++
T Consensus 43 ~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~--l~~lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 43 AVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQ--LTSLPV---LPPGLLELSIFS 110 (622)
T ss_dssp CEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCC--CSCCCC---CCTTCCEEEECS
T ss_pred cEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCc--CCcCCC---CCCCCCEEECcC
Confidence 34566666666 6677665 78999999999998 4554 56888999999987 556776 567788888888
Q ss_pred CCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccC
Q 002826 216 SGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSI 295 (876)
Q Consensus 216 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 295 (876)
|+++++.+ .+++|+.|++++|+|+ .+|.. +++|++|+|++|++++. |. .+++|+.|++++|.|++ +
T Consensus 111 N~l~~l~~----~l~~L~~L~L~~N~l~-~lp~~----l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 111 NPLTHLPA----LPSGLCKLWIFGNQLT-SLPVL----PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp CCCCCCCC----CCTTCCEEECCSSCCS-CCCCC----CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-C
T ss_pred CcCCCCCC----CCCCcCEEECCCCCCC-cCCCC----CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-C
Confidence 88876433 4677778888888877 56653 36777777777777642 32 23455566666666553 2
Q ss_pred CCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCcccccc
Q 002826 296 PGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVK 375 (876)
Q Consensus 296 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 375 (876)
| ..+++|+.|++++|+| ++. |. .+++|+.|++++|+++ .+|.. ++
T Consensus 177 ~---~~~~~L~~L~Ls~N~l------------------------~~l-~~---~~~~L~~L~L~~N~l~-~l~~~---~~ 221 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQL------------------------ASL-PT---LPSELYKLWAYNNRLT-SLPAL---PS 221 (622)
T ss_dssp C---CCCTTCCEEECCSSCC------------------------SCC-CC---CCTTCCEEECCSSCCS-SCCCC---CT
T ss_pred c---ccCCCCcEEECCCCCC------------------------CCC-CC---ccchhhEEECcCCccc-ccCCC---CC
Confidence 2 2234444444444444 432 21 1245566666666665 33332 35
Q ss_pred CccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCC
Q 002826 376 SLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSD 455 (876)
Q Consensus 376 ~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 455 (876)
+|+.|++++|+|++ +| ..+++|+.|+|++|+|+..++ .+++|+.|+|++|+|+ .+|..|..+++|+.|+|++
T Consensus 222 ~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~ 293 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 293 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCS
T ss_pred CCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecC
Confidence 66677777777765 33 344677888888888875544 5678889999999988 6788888999999999999
Q ss_pred CcccccCCCccccc
Q 002826 456 NNLTGPIPQGLQNL 469 (876)
Q Consensus 456 N~l~~~~p~~~~~l 469 (876)
|++++..|..+..+
T Consensus 294 N~l~~~~~~~l~~L 307 (622)
T 3g06_A 294 NPLSERTLQALREI 307 (622)
T ss_dssp CCCCHHHHHHHHHH
T ss_pred CCCCCcCHHHHHhc
Confidence 99988887776654
No 313
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=2.7e-32 Score=323.28 Aligned_cols=325 Identities=14% Similarity=0.074 Sum_probs=159.4
Q ss_pred CccccceecccccccCCC----cCccccCCCcceEEEccCCCCc---CCCCCCcccccCcccEEEecCCCCcccCCcccc
Q 002826 155 SLVNLQVLNLGSNLLSGS----VPFVFGNFSELVVLDLSQNAYL---ISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFV 227 (876)
Q Consensus 155 ~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~~~---~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 227 (876)
++++|++|+|++|.+++. ++..+.++++|++|+|++|.+. ...++..+.++++|++|+|++|.+.+ +|..+.
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh
Confidence 456666666666665544 2333445566666666666521 01222234455666666666666654 345555
Q ss_pred CCCCCcEEecccCccC---CCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCC-CCCcccc
Q 002826 228 GLQSLSILDLSQNNLT---GEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIP-GSINECL 303 (876)
Q Consensus 228 ~l~~L~~L~Ls~N~l~---~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~ 303 (876)
++++|+.|+++.+... +..+..+ ..+++|+.|+++++... .+|..+..+++|++|+|++|.+++... ..+..++
T Consensus 241 ~~~~L~~L~l~~~~~~~~~~~~~~~l-~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~ 318 (592)
T 3ogk_B 241 AAANLEEFCGGSLNEDIGMPEKYMNL-VFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCP 318 (592)
T ss_dssp HCTTCCEEEECBCCCCTTCTTSSSCC-CCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCT
T ss_pred hhhHHHhhcccccccccchHHHHHHh-hccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCc
Confidence 6666666666543221 1112222 23455666666554322 445555555666666666665543322 2234555
Q ss_pred ccceeecccccCC-CCCCcccCCCCcccEEEec-----------CCcccccCc-cccccCCCCCeeeccCcccCCCCCCc
Q 002826 304 NLERFQVQDNGFS-GDFPDKLWSLPRIKLIRAE-----------SNRFSGAIP-DSISMAAQLEQVQIDNNRFTSSIPQG 370 (876)
Q Consensus 304 ~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~-----------~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~ 370 (876)
+|++|+++ |.+. +.++..+..+++|+.|+++ .|.+++... ..+..+++|++|+++.|++++..+..
T Consensus 319 ~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~ 397 (592)
T 3ogk_B 319 NLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLES 397 (592)
T ss_dssp TCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHH
T ss_pred CCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHH
Confidence 66666665 2222 2222233445556666666 244443322 22334556666666656665544444
Q ss_pred ccc-ccCccEEeCC----CccccCC-----CCCCcCCCCCccEEEccCCc--cccCCc-Cc-ccccccceEeccCCcCCC
Q 002826 371 LGS-VKSLYRFSAS----QNSFYGS-----LPPNFCDSPVMSIINLSQNS--ISGQIP-EL-KKCRKLVSLSLADNSLTG 436 (876)
Q Consensus 371 ~~~-l~~L~~L~ls----~N~l~~~-----~~~~~~~~~~L~~L~Ls~N~--l~~~~~-~~-~~l~~L~~L~Ls~N~l~~ 436 (876)
+.. +++|+.|+++ .|.+++. ++..+.++++|+.|+|++|. +++... .+ ..+++|++|+|++|++++
T Consensus 398 l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~ 477 (592)
T 3ogk_B 398 IGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESD 477 (592)
T ss_dssp HHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSH
T ss_pred HHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCH
Confidence 443 5556666664 4455442 11224445566666665322 333222 22 225556666666666554
Q ss_pred -CCCcCCCCCCCcceeeCCCCccccc-CCCccccc-ccceEEccCCcccc
Q 002826 437 -EIPPSLAELPVLTYLDLSDNNLTGP-IPQGLQNL-KLALFNVSFNKLSG 483 (876)
Q Consensus 437 -~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l-~l~~l~ls~N~l~~ 483 (876)
.++..+.++++|++|+|++|.+++. ++.....+ +++.|++++|+++.
T Consensus 478 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 478 EGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp HHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred HHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 2233345556666666666665432 22222223 35556666666553
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.5e-28 Score=277.78 Aligned_cols=247 Identities=19% Similarity=0.215 Sum_probs=206.6
Q ss_pred ccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCC-CCcccccCcccEEEecCCCCcccCCccccCCCCCcEEe
Q 002826 158 NLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEI-PSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILD 236 (876)
Q Consensus 158 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~-p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 236 (876)
..+.++.+++.++ .+|..+. ++++.|+|++|+ +..+ +..|.++++|++|+|++|+++++.+..|.++++|++|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~--i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~ 118 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQ--IQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE 118 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCC--CCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEE
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCc--CCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEE
Confidence 4567889999998 6666554 689999999998 4444 46799999999999999999999999999999999999
Q ss_pred cccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeec-ccccccCCCCCccccccceeecccccC
Q 002826 237 LSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHK-NFFNGSIPGSINECLNLERFQVQDNGF 315 (876)
Q Consensus 237 Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~L~~N~l 315 (876)
|++|+|+ .+|...+..+++|++|+|++|+|+...+..|..+++|++|+|++ |.+..+.+..|.++++|++|++++|++
T Consensus 119 L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l 197 (440)
T 3zyj_A 119 LFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL 197 (440)
T ss_dssp CCSSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCC
T ss_pred CCCCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcC
Confidence 9999999 77777777899999999999999988888999999999999999 566666667899999999999999999
Q ss_pred CCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCc
Q 002826 316 SGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNF 395 (876)
Q Consensus 316 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~ 395 (876)
+. +| .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|++++..+..|
T Consensus 198 ~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 275 (440)
T 3zyj_A 198 RE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLF 275 (440)
T ss_dssp SS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTT
T ss_pred cc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHh
Confidence 84 44 47778888888888888888778888888888888888888877777777777777777777777776666667
Q ss_pred CCCCCccEEEccCCccc
Q 002826 396 CDSPVMSIINLSQNSIS 412 (876)
Q Consensus 396 ~~~~~L~~L~Ls~N~l~ 412 (876)
..+++|+.|+|++|.+.
T Consensus 276 ~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 276 TPLHHLERIHLHHNPWN 292 (440)
T ss_dssp SSCTTCCEEECCSSCEE
T ss_pred ccccCCCEEEcCCCCcc
Confidence 77777777777777664
No 315
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.4e-28 Score=279.02 Aligned_cols=89 Identities=22% Similarity=0.209 Sum_probs=52.2
Q ss_pred cccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcc
Q 002826 371 LGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLT 449 (876)
Q Consensus 371 ~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 449 (876)
+..+++|+.|++++|.+++..|..|.++++|+.|+|++|++++..+ .|..+++|+.|+|++|+|++..+..|..+++|+
T Consensus 214 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 293 (452)
T 3zyi_A 214 LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLV 293 (452)
T ss_dssp CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCC
T ss_pred ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCC
Confidence 3344444444555555544445555555555555555555555444 456666666666666666666666666677777
Q ss_pred eeeCCCCccc
Q 002826 450 YLDLSDNNLT 459 (876)
Q Consensus 450 ~L~Ls~N~l~ 459 (876)
.|+|++|.+.
T Consensus 294 ~L~L~~Np~~ 303 (452)
T 3zyi_A 294 ELHLHHNPWN 303 (452)
T ss_dssp EEECCSSCEE
T ss_pred EEEccCCCcC
Confidence 7777777665
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.3e-30 Score=279.16 Aligned_cols=201 Identities=18% Similarity=0.218 Sum_probs=138.2
Q ss_pred cCCccceeeeecccccccCCCCC--ccccccceeecccccCCCCCCcccCCC-----CcccEEEecCCcccccCcccccc
Q 002826 277 KANGLVNLSLHKNFFNGSIPGSI--NECLNLERFQVQDNGFSGDFPDKLWSL-----PRIKLIRAESNRFSGAIPDSISM 349 (876)
Q Consensus 277 ~l~~L~~L~L~~N~i~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~ 349 (876)
++++|++|+|++|++++.+|..+ ..+++|++|++++|++++. |..+..+ ++|++|++++|++++..|..|..
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 34555555555555555555443 5555555555555555544 4444444 56666666666666555566666
Q ss_pred CCCCCeeeccCcccCCC--CCCcc--ccccCccEEeCCCccccC---CCCCCcCCCCCccEEEccCCccccCCc--Cccc
Q 002826 350 AAQLEQVQIDNNRFTSS--IPQGL--GSVKSLYRFSASQNSFYG---SLPPNFCDSPVMSIINLSQNSISGQIP--ELKK 420 (876)
Q Consensus 350 l~~L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~ls~N~l~~---~~~~~~~~~~~L~~L~Ls~N~l~~~~~--~~~~ 420 (876)
+++|++|+|++|++++. .|..+ ..+++|++|++++|++++ .....+..+++|+.|+|++|++++.++ .+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 66666666666665543 12222 566777777777777762 222345577889999999999998774 6778
Q ss_pred ccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccc-ccceEEccCCcccc
Q 002826 421 CRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL-KLALFNVSFNKLSG 483 (876)
Q Consensus 421 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~ls~N~l~~ 483 (876)
+++|++|+|++|+|+ .+|..+. ++|++|||++|+|++. |. +..+ +++.|++++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 899999999999999 7777776 8999999999999976 66 6666 58999999999985
No 317
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=5.7e-28 Score=283.03 Aligned_cols=297 Identities=20% Similarity=0.306 Sum_probs=208.4
Q ss_pred CCCCCCCCCCCCccccceEecCCCCCccEEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCc
Q 002826 48 LSTWSNTSNIHYCNWTGVTCVTTATASLTVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLET 127 (876)
Q Consensus 48 ~~sW~~~~~~~~C~w~gv~c~~~~~~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 127 (876)
.++|... .+||.|+|..|.... ...+...+++.|++++|.++ .+|..+. ++|++
T Consensus 12 w~~W~~~--~~~~~~~~r~~~~~~---------------------~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~ 65 (622)
T 3g06_A 12 WSAWRRA--APAEESRGRAAVVQK---------------------MRACLNNGNAVLNVGESGLT-TLPDCLP--AHITT 65 (622)
T ss_dssp HHHHHHT--CCGGGHHHHHHHHHH---------------------HHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSE
T ss_pred HHHHHhc--CCcchhccccccCcc---------------------cccccCCCCcEEEecCCCcC-ccChhhC--CCCcE
Confidence 4567543 479999886653221 01122356999999999998 4677665 67877
Q ss_pred ccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCc
Q 002826 128 LNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEK 207 (876)
Q Consensus 128 L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~ 207 (876)
|+|++| +|+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+ +..+|. .+++
T Consensus 66 L~L~~N----------~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~--l~~l~~---~l~~ 122 (622)
T 3g06_A 66 LVIPDN----------NLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNP--LTHLPA---LPSG 122 (622)
T ss_dssp EEECSC----------CCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCC--CCCCCC---CCTT
T ss_pred EEecCC----------CCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCc--CCCCCC---CCCC
Confidence 765555 444 3454 47899999999999984 554 78999999999998 667777 6789
Q ss_pred ccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeee
Q 002826 208 LEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLH 287 (876)
Q Consensus 208 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 287 (876)
|+.|++++|+++++ |.. +++|++|+|++|+|+ .+|.. +++|+.|++++|+|++ +| ..+++|+.|+|+
T Consensus 123 L~~L~L~~N~l~~l-p~~---l~~L~~L~Ls~N~l~-~l~~~----~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls 189 (622)
T 3g06_A 123 LCKLWIFGNQLTSL-PVL---PPGLQELSVSDNQLA-SLPAL----PSELCKLWAYNNQLTS-LP---MLPSGLQELSVS 189 (622)
T ss_dssp CCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCS-CCCCC----CTTCCEEECCSSCCSC-CC---CCCTTCCEEECC
T ss_pred cCEEECCCCCCCcC-CCC---CCCCCEEECcCCcCC-CcCCc----cCCCCEEECCCCCCCC-Cc---ccCCCCcEEECC
Confidence 99999999999975 443 589999999999999 66653 5789999999999995 55 457899999999
Q ss_pred cccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCC
Q 002826 288 KNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSI 367 (876)
Q Consensus 288 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 367 (876)
+|.|++ +|.. +++|+.|++++|.++. +|.. +++|+.|++++|+|++ +
T Consensus 190 ~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-------------------------l 236 (622)
T 3g06_A 190 DNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-------------------------L 236 (622)
T ss_dssp SSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-------------------------C
T ss_pred CCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-------------------------C
Confidence 999996 3432 3678888888888773 3321 2455555555555553 2
Q ss_pred CCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCC
Q 002826 368 PQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELP 446 (876)
Q Consensus 368 p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 446 (876)
| ..+++|+.|++++|+|++ +|. .+++|+.|+|++|+|+..++.+.++++|+.|+|++|++++.+|..+..++
T Consensus 237 p---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 237 P---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred C---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 2 223445555555555543 222 34566667777777765544677777777777777777776666555443
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=5.1e-30 Score=278.33 Aligned_cols=265 Identities=16% Similarity=0.157 Sum_probs=164.0
Q ss_pred cceEEEccCCCCcCCCCCC-cccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEE
Q 002826 182 ELVVLDLSQNAYLISEIPS-DIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSF 260 (876)
Q Consensus 182 ~L~~L~Ls~N~~~~~~~p~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L 260 (876)
+++.++++++. +...+. .+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..| +..+++|++|
T Consensus 11 ~l~i~~ls~~~--l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L 85 (317)
T 3o53_A 11 RYKIEKVTDSS--LKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTL 85 (317)
T ss_dssp EEEEESCCTTT--HHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE---ETTCTTCCEE
T ss_pred ceeEeeccccc--hhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh---hhhcCCCCEE
Confidence 34555666665 222222 23445566677777776666666666666666677776666663322 3446666666
Q ss_pred EeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCccc
Q 002826 261 DVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFS 340 (876)
Q Consensus 261 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 340 (876)
+|++|++++.. ..++|++|++++|+|++..+.. +++|+.|++++|+++
T Consensus 86 ~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---------------------------~~~L~~L~l~~N~l~ 133 (317)
T 3o53_A 86 DLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR---------------------------GQGKKNIYLANNKIT 133 (317)
T ss_dssp ECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---------------------------CSSCEEEECCSSCCC
T ss_pred ECcCCcccccc-----CCCCcCEEECCCCccCCcCccc---------------------------cCCCCEEECCCCCCC
Confidence 66666665322 2255555555555555444332 234444555555554
Q ss_pred ccCccccccCCCCCeeeccCcccCCCCCCcc-ccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCcCcc
Q 002826 341 GAIPDSISMAAQLEQVQIDNNRFTSSIPQGL-GSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELK 419 (876)
Q Consensus 341 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~ 419 (876)
+..+..+..+++|++|++++|++++..+..+ ..+++|++|++++|.+++..+ ...+++|+.|+|++|++++.++.+.
T Consensus 134 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~~~~~ 211 (317)
T 3o53_A 134 MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQ 211 (317)
T ss_dssp SGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGG
T ss_pred CccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcchhhhc
Confidence 4444445555555555555555554444443 245555566666665554422 2236778888888888888777888
Q ss_pred cccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCccc-ccCCCccccc-ccceEEcc-CCccccccC
Q 002826 420 KCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLT-GPIPQGLQNL-KLALFNVS-FNKLSGRVP 486 (876)
Q Consensus 420 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l-~l~~l~ls-~N~l~~~~p 486 (876)
.+++|++|+|++|+|+ .+|..+..+++|+.|++++|+++ +.+|..+..+ +++.++++ .+.+.|..|
T Consensus 212 ~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 212 SAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp GGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred ccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 8899999999999998 56778888999999999999998 6677777766 47777887 445665444
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.4e-28 Score=282.62 Aligned_cols=251 Identities=17% Similarity=0.147 Sum_probs=142.7
Q ss_pred CCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcc
Q 002826 141 SRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHG 220 (876)
Q Consensus 141 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~ 220 (876)
+..++...+.......++|++|+|++|.+++..|..|+++++|++|+|++|. +..+++ +..+++|++|+|++|++++
T Consensus 18 ~~~~l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~--l~~~~~-l~~l~~L~~L~Ls~N~l~~ 94 (487)
T 3oja_A 18 TDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNV--LYETLD-LESLSTLRTLDLNNNYVQE 94 (487)
T ss_dssp CTTTHHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSC--CEEEEE-CTTCTTCCEEECCSSEEEE
T ss_pred chhhhHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCC--CCCCcc-cccCCCCCEEEecCCcCCC
Confidence 3333333333333445578888888888877777777777777777777776 222222 5556666666666666654
Q ss_pred cCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCc
Q 002826 221 VIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSIN 300 (876)
Q Consensus 221 ~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~ 300 (876)
+.+ .++|++|+|++|+|++ ++.. .+++|++|+|++|++++..|..+..+++|++|+|++|.|++.+|..|.
T Consensus 95 l~~-----~~~L~~L~L~~N~l~~-~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 165 (487)
T 3oja_A 95 LLV-----GPSIETLHAANNNISR-VSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (487)
T ss_dssp EEE-----CTTCCEEECCSSCCCC-EEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred CCC-----CCCcCEEECcCCcCCC-CCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHh
Confidence 322 2556666666666663 2222 134555555555555555555555555555555555555544444443
Q ss_pred cccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEE
Q 002826 301 ECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRF 380 (876)
Q Consensus 301 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 380 (876)
..+++|+.|+|++|.+++..+ +..+++|+.|+|++|++++. |..+..+++|+.|
T Consensus 166 -----------------------~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L 219 (487)
T 3oja_A 166 -----------------------ASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWI 219 (487)
T ss_dssp -----------------------GGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEE
T ss_pred -----------------------hhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEE
Confidence 134444444555554444322 22355555666666666543 3335566666666
Q ss_pred eCCCccccCCCCCCcCCCCCccEEEccCCccc-cCCc-CcccccccceEecc
Q 002826 381 SASQNSFYGSLPPNFCDSPVMSIINLSQNSIS-GQIP-ELKKCRKLVSLSLA 430 (876)
Q Consensus 381 ~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~-~~~~-~~~~l~~L~~L~Ls 430 (876)
++++|.+++ +|..+..+++|+.|++++|.+. +.+| .+..++.|+.|+++
T Consensus 220 ~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 220 SLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp ECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred EecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 666666664 4555666677777777777776 3333 56777888888876
No 320
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.94 E-value=4.1e-30 Score=304.57 Aligned_cols=361 Identities=18% Similarity=0.137 Sum_probs=224.8
Q ss_pred CCCCCCeeecCCCccccccCccccCC--CCCCcccCCCcc----------------cceeecCCcccccc----CCCccC
Q 002826 97 ELSSLSNLNLADNLFNQPIPLHLSQC--SSLETLNLSNNL----------------IWVLDLSRNHIEGK----IPESIG 154 (876)
Q Consensus 97 ~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~N~----------------l~~LdL~~n~l~~~----~p~~~~ 154 (876)
.+++|++|+|++|.+++..+..+..+ ++|++|+|++|. |++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 56777777777777776666666553 347777777653 45677777777655 233445
Q ss_pred CccccceecccccccCC----CcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCc---ccCCcccc
Q 002826 155 SLVNLQVLNLGSNLLSG----SVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFH---GVIPDSFV 227 (876)
Q Consensus 155 ~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~---~~~~~~~~ 227 (876)
.+++|++|+|++|.+++ .++..+.++++|++|+|++|. ...+|..+.++++|++|+++.+... +..+..+.
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~--~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~ 267 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFE--ILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLV 267 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCB--GGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCcc--HHHHHHHHhhhhHHHhhcccccccccchHHHHHHhh
Confidence 66777777777777762 334445567777777777776 4456666777777777777653322 23345566
Q ss_pred CCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCC-cccccCCccceeeeecccccccCCCCCccccccc
Q 002826 228 GLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFP-NGICKANGLVNLSLHKNFFNGSIPGSINECLNLE 306 (876)
Q Consensus 228 ~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 306 (876)
.+++|+.|+++++... .+|..+ ..+++|++|+|++|.+++... ..+..+++|++|+++++...+.++..+..+++|+
T Consensus 268 ~~~~L~~L~l~~~~~~-~l~~~~-~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~ 345 (592)
T 3ogk_B 268 FPRKLCRLGLSYMGPN-EMPILF-PFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLK 345 (592)
T ss_dssp CCTTCCEEEETTCCTT-TGGGGG-GGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCC
T ss_pred ccccccccCccccchh-HHHHHH-hhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCC
Confidence 6777777777775443 555443 447777777777777654333 2346677777777773322223333345667777
Q ss_pred eeecc-----------cccCCCCCCc-ccCCCCcccEEEecCCcccccCcccccc-CCCCCeeecc----CcccCCC---
Q 002826 307 RFQVQ-----------DNGFSGDFPD-KLWSLPRIKLIRAESNRFSGAIPDSISM-AAQLEQVQID----NNRFTSS--- 366 (876)
Q Consensus 307 ~L~L~-----------~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~--- 366 (876)
+|+++ .|.+++.... .+..+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+++.
T Consensus 346 ~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~ 425 (592)
T 3ogk_B 346 RLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLD 425 (592)
T ss_dssp EEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCH
T ss_pred EEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHH
Confidence 77777 3555533222 2344677777777777777666666654 6777777775 5666643
Q ss_pred --CCCccccccCccEEeCCCcc--ccCCCCCCcC-CCCCccEEEccCCccccC-Cc-CcccccccceEeccCCcCCCC-C
Q 002826 367 --IPQGLGSVKSLYRFSASQNS--FYGSLPPNFC-DSPVMSIINLSQNSISGQ-IP-ELKKCRKLVSLSLADNSLTGE-I 438 (876)
Q Consensus 367 --~p~~~~~l~~L~~L~ls~N~--l~~~~~~~~~-~~~~L~~L~Ls~N~l~~~-~~-~~~~l~~L~~L~Ls~N~l~~~-~ 438 (876)
++..+.++++|++|++++|. +++..+..+. .+++|+.|+|++|++++. ++ .+..+++|++|+|++|++++. +
T Consensus 426 ~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 505 (592)
T 3ogk_B 426 NGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAI 505 (592)
T ss_dssp HHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHH
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHH
Confidence 22335567777777776432 4443333333 356777777777777652 22 346677777777777776543 2
Q ss_pred CcCCCCCCCcceeeCCCCccccc
Q 002826 439 PPSLAELPVLTYLDLSDNNLTGP 461 (876)
Q Consensus 439 p~~~~~l~~L~~L~Ls~N~l~~~ 461 (876)
+..+..+++|++|+|++|++++.
T Consensus 506 ~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 506 AAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHhcCccCeeECcCCcCCHH
Confidence 33345677777777777777654
No 321
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=3.2e-28 Score=283.48 Aligned_cols=183 Identities=19% Similarity=0.057 Sum_probs=130.2
Q ss_pred CCCCceEEEEE-EeCCCcEEEEEEEecCCc----------cCHHHHHHHHHHHhhc-cCccccceeeEEEeCCeEEEEEE
Q 002826 591 NGGPFGRVYIL-SLPSGELIAVKKLVNFGC----------QSSKTLKTEVKTLAKI-RHKNIVKVLGFFHSDESIFLIYE 658 (876)
Q Consensus 591 ~~g~~g~Vy~~-~~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 658 (876)
..|..|.+..+ +...|+.||+|++..... ...+++.+|+++|+++ .|+||+++++++++++..|||||
T Consensus 243 ~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVME 322 (569)
T 4azs_A 243 YAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVME 322 (569)
T ss_dssp C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEE
T ss_pred ccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEe
Confidence 33435555554 334699999999975432 1235688999999999 79999999999999999999999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccc
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQ 738 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 738 (876)
|++|++|.+++.+.+ .+++. +|+.||+.||+|+|++ ||+||||||+|||+++++++||+|||+|+.......
T Consensus 323 yv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~- 394 (569)
T 4azs_A 323 KLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS- 394 (569)
T ss_dssp CCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---C-
T ss_pred cCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCCc-
Confidence 999999999997764 56654 5789999999999999 999999999999999999999999999987654321
Q ss_pred cccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCC
Q 002826 739 STMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQA 783 (876)
Q Consensus 739 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p 783 (876)
......||+.|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 395 -~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 395 -WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred -cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 2334569999999999865 466789999999998887666443
No 322
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.2e-26 Score=245.68 Aligned_cols=218 Identities=22% Similarity=0.323 Sum_probs=134.9
Q ss_pred CCCccccceEecCCCCCccEEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccc
Q 002826 57 IHYCNWTGVTCVTTATASLTVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIW 136 (876)
Q Consensus 57 ~~~C~w~gv~c~~~~~~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 136 (876)
.++|.|.|+.|..... ...+++.+++++. +|..+. ++|++|+|++|++++
T Consensus 2 ~~~C~~~~~~C~c~~~----~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~----------------------- 51 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNN----KNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSS----------------------- 51 (270)
T ss_dssp CCCBGGGTCSBEEETT----TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSC-----------------------
T ss_pred CccCCCCCCCCEeCCC----CCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCe-----------------------
Confidence 3799999999965421 1234444444442 333222 344444444444444
Q ss_pred eeecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCC-cccccCcccEEEecC
Q 002826 137 VLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPS-DIGKLEKLEQLFLQS 215 (876)
Q Consensus 137 ~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~-~~~~l~~L~~L~L~~ 215 (876)
..+..|.++++|++|+|++|+++...+..|.++++|++|+|++|+ +..+|. .|.++++|++|+|++
T Consensus 52 -----------~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~--l~~~~~~~~~~l~~L~~L~l~~ 118 (270)
T 2o6q_A 52 -----------LPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNK--LQALPIGVFDQLVNLAELRLDR 118 (270)
T ss_dssp -----------CCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSC--CCCCCTTTTTTCSSCCEEECCS
T ss_pred -----------eCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCc--CCcCCHhHcccccCCCEEECCC
Confidence 444455555555555555555554444455555555555555555 333433 345566666666666
Q ss_pred CCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccC
Q 002826 216 SGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSI 295 (876)
Q Consensus 216 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 295 (876)
|++++..+..|.++++|++|+|++|+|+ .+|...+..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..
T Consensus 119 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 119 NQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CccCeeCHHHhCcCcCCCEEECCCCcCC-ccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 6666666666777777777777777777 555555556777777777777777666666777777777777777777766
Q ss_pred CCCCccccccceeecccccCCCC
Q 002826 296 PGSINECLNLERFQVQDNGFSGD 318 (876)
Q Consensus 296 ~~~~~~l~~L~~L~L~~N~l~~~ 318 (876)
+..|..+++|+.|++++|.+...
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 198 EGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCS
T ss_pred HHHhccccCCCEEEecCCCeeCC
Confidence 66777777888888888877644
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=1.4e-26 Score=246.17 Aligned_cols=226 Identities=17% Similarity=0.147 Sum_probs=154.1
Q ss_pred EEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccc
Q 002826 234 ILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDN 313 (876)
Q Consensus 234 ~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 313 (876)
..+.++.+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|++++|
T Consensus 11 ~~~c~~~~l~-~ip~~l~---~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp EEECTTSCCS-SCCSSSC---TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred eEEecCCCcc-ccCCCCC---CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCC
Confidence 4455555565 5665542 35666666666666655556666666666666666666666666666666777777766
Q ss_pred cCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCC-CCCccccccCccEEeCCCccccCCCC
Q 002826 314 GFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSS-IPQGLGSVKSLYRFSASQNSFYGSLP 392 (876)
Q Consensus 314 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~~~ 392 (876)
++++..+..|.++++|++|++++|++++..+..+..+++|++|++++|++++. +|..+.++++|+.|++++|++++..+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred ccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 66666666666666667777766666666665666666777777777776653 46666667777777777777766666
Q ss_pred CCcCCCCCcc----EEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCC
Q 002826 393 PNFCDSPVMS----IINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIP 463 (876)
Q Consensus 393 ~~~~~~~~L~----~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 463 (876)
..|..+..|+ .|++++|++++.++......+|++|+|++|++++..+..|..+++|+.|+|++|++++..|
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred HHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 6665555555 6788888887776654455578888888888887777777888888888888888876443
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.5e-25 Score=238.15 Aligned_cols=221 Identities=15% Similarity=0.170 Sum_probs=134.3
Q ss_pred EEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccc
Q 002826 186 LDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQN 265 (876)
Q Consensus 186 L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N 265 (876)
.+.++.. ...+|..+. ++|++|++++|++++..+..|.++++|++|+|++|+++ .++...+..+++|++|+|++|
T Consensus 12 ~~c~~~~--l~~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 12 YQCMELN--FYKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp EECTTSC--CSSCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCC-EECTTTTTTCTTCCEEECTTC
T ss_pred EEecCCC--ccccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCC-ccCHHHccCCcCCCEEECCCC
Confidence 4444443 455565543 35677777777777666667777777777777777776 455444455667777777777
Q ss_pred cccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCC-CCcccCCCCcccEEEecCCcccccCc
Q 002826 266 KLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGD-FPDKLWSLPRIKLIRAESNRFSGAIP 344 (876)
Q Consensus 266 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~ 344 (876)
++++..+..|.++++|++|++++|.+++..+..|..+++|++|++++|++++. +|..+.++++|+.|++++|++++..+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred ccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 77666666666666677777777766666555666666666666666666653 36666666666666666666666555
Q ss_pred cccccCCCCC----eeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCc-Ccc
Q 002826 345 DSISMAAQLE----QVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIP-ELK 419 (876)
Q Consensus 345 ~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~ 419 (876)
..+..+.+|+ .|++++|+++ +..+..+.. .+|+.|+|++|++++.++ .|.
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~------------------------~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~ 221 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMN------------------------FIQPGAFKE-IRLKELALDTNQLKSVPDGIFD 221 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCC------------------------EECTTSSCS-CCEEEEECCSSCCSCCCTTTTT
T ss_pred HHhhhhhhccccceeeecCCCccc------------------------ccCccccCC-CcccEEECCCCceeecCHhHhc
Confidence 5555555554 4455555554 333333322 245555555555555544 345
Q ss_pred cccccceEeccCCcCCC
Q 002826 420 KCRKLVSLSLADNSLTG 436 (876)
Q Consensus 420 ~l~~L~~L~Ls~N~l~~ 436 (876)
.+++|++|+|++|++++
T Consensus 222 ~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 222 RLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp TCCSCCEEECCSSCBCC
T ss_pred ccccccEEEccCCcccc
Confidence 56666666666666653
No 325
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.2e-24 Score=230.21 Aligned_cols=177 Identities=22% Similarity=0.273 Sum_probs=88.1
Q ss_pred ceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEe
Q 002826 183 LVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDV 262 (876)
Q Consensus 183 L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L 262 (876)
.+++++++|+ +..+|..+. ++|++|+|++|+++++.+..|.++++|++|+|++|+|+ .+|..++..+++|++|+|
T Consensus 18 ~~~l~~~~~~--l~~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 18 KNSVDCSSKK--LTAIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTEEECTTSC--CSSCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEEC
T ss_pred CCEEEccCCC--CCccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeChhhhcCCCCCCEEEC
Confidence 3444444444 334444332 34555555555555555555666666666666666665 555555455555555555
Q ss_pred ccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCccccc
Q 002826 263 SQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGA 342 (876)
Q Consensus 263 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 342 (876)
++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|.+++..+..|..+++|+.|++++|++++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 55555544444445555555555555555544444445555555555555554444333344444444444444444433
Q ss_pred CccccccCCCCCeeeccCcccC
Q 002826 343 IPDSISMAAQLEQVQIDNNRFT 364 (876)
Q Consensus 343 ~~~~~~~l~~L~~L~L~~N~l~ 364 (876)
.+..|..+++|++|+|++|+++
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~ 194 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLK 194 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCS
T ss_pred ChhHhccCCCcCEEECCCCcCC
Confidence 3333434444444444444443
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=2.4e-25 Score=235.91 Aligned_cols=207 Identities=18% Similarity=0.231 Sum_probs=101.3
Q ss_pred CccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcE
Q 002826 155 SLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSI 234 (876)
Q Consensus 155 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 234 (876)
.+++|+.|++++|.++. + ..++.+++|++|+|++|+ +..+ ..+..+++|++|+|++|++++..+..|.++++|++
T Consensus 39 ~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~--l~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNK--LHDI-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKE 113 (272)
T ss_dssp HHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSC--CCCC-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred cccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCC--CCCc-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCE
Confidence 34444555555554442 1 124444455555555544 2222 23444445555555555555444444555555555
Q ss_pred EecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeeccccc
Q 002826 235 LDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNG 314 (876)
Q Consensus 235 L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 314 (876)
|+|++|+++ .+|...+..+++|++|+|++|++++..+..+..+++|++|++++|++++..+..|..+++|++|++++|+
T Consensus 114 L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 114 LVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCcCC-ccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 555555555 3333333345555555555555554444444555555555555555554444445555555555555555
Q ss_pred CCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccc
Q 002826 315 FSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSV 374 (876)
Q Consensus 315 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 374 (876)
+++..+..+..+++|+.|++++|.+.+. +++|+.|+++.|+++|.+|.+++.+
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 5554444455555555555555554432 2235555555555555555555443
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.9e-25 Score=236.72 Aligned_cols=228 Identities=16% Similarity=0.193 Sum_probs=161.5
Q ss_pred ccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEE
Q 002826 156 LVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSIL 235 (876)
Q Consensus 156 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 235 (876)
+.++..+++.++.+.+. ..+..+++|+.|++++|. +..++ .+..+++|++|++++|++++. ..+..+++|++|
T Consensus 18 ~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~--i~~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 90 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSD--IKSVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYL 90 (272)
T ss_dssp HHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSC--CCCCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEE
T ss_pred HHHHHHHHhcCcccccc--cccccccceeeeeeCCCC--ccccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEE
Confidence 45677888888887654 335678889999999887 44443 477788888888888888764 467788888888
Q ss_pred ecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccC
Q 002826 236 DLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGF 315 (876)
Q Consensus 236 ~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 315 (876)
+|++|+++ .++...+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|++
T Consensus 91 ~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 169 (272)
T 3rfs_A 91 ILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL 169 (272)
T ss_dssp ECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCccC-ccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCc
Confidence 88888887 55555555677888888888888776666677777777777777777766666677777777777777777
Q ss_pred CCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCc
Q 002826 316 SGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNF 395 (876)
Q Consensus 316 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~ 395 (876)
++..+..+..+++|+.|++++|++++..+..+..+++|++|++++|.+.+. +++|+.++++.|.++|.+|..+
T Consensus 170 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 170 QSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTT
T ss_pred CccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcc
Confidence 766666666677777777777777766666666666666666666666533 3345555566666666665555
Q ss_pred CCC
Q 002826 396 CDS 398 (876)
Q Consensus 396 ~~~ 398 (876)
+.+
T Consensus 243 ~~~ 245 (272)
T 3rfs_A 243 GSV 245 (272)
T ss_dssp SCB
T ss_pred ccc
Confidence 544
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=2.1e-24 Score=230.60 Aligned_cols=203 Identities=20% Similarity=0.200 Sum_probs=137.6
Q ss_pred ccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCcccccc
Q 002826 226 FVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNL 305 (876)
Q Consensus 226 ~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 305 (876)
+.++++++++++++|+++ .+|..++ ++++.|+|++|++++..+..|..+++|++|+|++|.|++..+. ..+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 566778888888888888 7777664 5778888888888777777777777788888777777754432 455566
Q ss_pred ceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCc
Q 002826 306 ERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQN 385 (876)
Q Consensus 306 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 385 (876)
++|++++|+++ .+|..+..++ +|++|++++|++++..|..|.++++|+.|++++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~------------------------~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N 134 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLP------------------------ALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN 134 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCT------------------------TCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCC------------------------CCCEEECCCCcCcccCHHHHcCCCCCCEEECCCC
Confidence 66666666655 3344444444 4455555555555444445555555555555555
Q ss_pred cccCCCCCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccc
Q 002826 386 SFYGSLPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTG 460 (876)
Q Consensus 386 ~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 460 (876)
++++..+..|..+++|+.|+|++|+|++.++ .|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|++..
T Consensus 135 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 135 ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 5555555556666667777777777776655 4667788888888888888 667777777888888888888864
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.8e-24 Score=231.13 Aligned_cols=202 Identities=17% Similarity=0.225 Sum_probs=132.5
Q ss_pred ccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCcccccccc
Q 002826 177 FGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLK 256 (876)
Q Consensus 177 ~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~ 256 (876)
++++++|+++++++|. +..+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|+|+ .++.. ..+++
T Consensus 6 ~~~l~~l~~l~~~~~~--l~~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~--~~l~~ 78 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRN--LTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD--GTLPV 78 (290)
T ss_dssp EECSTTCCEEECTTSC--CSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECC--SCCTT
T ss_pred ccccCCccEEECCCCC--CCcCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccC-cccCC--CCCCc
Confidence 4566667777777665 456666554 56777777777777777777888888888888888887 45443 35777
Q ss_pred ccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecC
Q 002826 257 LVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAES 336 (876)
Q Consensus 257 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 336 (876)
|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 79 L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 79 LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp CCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCC
Confidence 777777777776 5566666677777777777777766666666666777777777666666555566666666666666
Q ss_pred CcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccc
Q 002826 337 NRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSF 387 (876)
Q Consensus 337 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 387 (876)
|++++..+..|..+++|+.|+|++|+++ .+|..+...++|+.+++++|.+
T Consensus 158 N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 158 NNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred CcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 6666555555555666666666666665 4444444444444444444444
No 330
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=2e-24 Score=224.13 Aligned_cols=198 Identities=15% Similarity=0.162 Sum_probs=156.4
Q ss_pred CCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccc-cccCCCcCccc
Q 002826 99 SSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGS-NLLSGSVPFVF 177 (876)
Q Consensus 99 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~ 177 (876)
++|++|+|++|++++..+..|+++++|++|+|++|. .+++..+..|.++++|++|+|++ |++++..+..|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~---------~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDV---------TLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCS---------SCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCC---------CcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 389999999999999888899999999988655543 15555667889999999999998 99998778889
Q ss_pred cCCCcceEEEccCCCCcCCCCCCcccccCccc---EEEecCC-CCcccCCccccCCCCCc-EEecccCccCCCCCCcccc
Q 002826 178 GNFSELVVLDLSQNAYLISEIPSDIGKLEKLE---QLFLQSS-GFHGVIPDSFVGLQSLS-ILDLSQNNLTGEVPQSLGS 252 (876)
Q Consensus 178 ~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~---~L~L~~n-~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~ip~~~~~ 252 (876)
.++++|++|+|++|+ +..+|. |..+++|+ +|++++| +++++.+..|.++++|+ +|++++|+++ .+|...+.
T Consensus 102 ~~l~~L~~L~l~~n~--l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~ 177 (239)
T 2xwt_C 102 KELPLLKFLGIFNTG--LKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFN 177 (239)
T ss_dssp ECCTTCCEEEEEEEC--CCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTT
T ss_pred CCCCCCCEEeCCCCC--Cccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcC
Confidence 999999999999998 556776 77788887 9999999 88888888888899999 9999999888 78877776
Q ss_pred ccccccEEEecccc-ccCcCCcccccC-CccceeeeecccccccCCCCCccccccceeecccc
Q 002826 253 SLLKLVSFDVSQNK-LSGSFPNGICKA-NGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDN 313 (876)
Q Consensus 253 ~l~~L~~L~L~~N~-l~~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 313 (876)
. ++|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 178 ~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 178 G-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp T-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred C-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 4 788888888884 776666667777 7777777777777644333 3445555555544
No 331
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1.3e-25 Score=248.49 Aligned_cols=250 Identities=15% Similarity=0.163 Sum_probs=123.2
Q ss_pred ecCCCCcccCCccccCCCCCcEEecccCccCCCCCC----ccccccc-cccEEEeccccccCcCCcccccC-----Cccc
Q 002826 213 LQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQ----SLGSSLL-KLVSFDVSQNKLSGSFPNGICKA-----NGLV 282 (876)
Q Consensus 213 L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~L~ 282 (876)
++.|++++.+|..+...++|++|+|++|+|+ ..+. ..+..++ +|++|+|++|+|++..+..+..+ ++|+
T Consensus 5 ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~-~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 5 LTLHPGSNPVEEFTSIPHGVTSLDLSLNNLY-SISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp CCCCTTCCHHHHHHTSCTTCCEEECTTSCGG-GSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred cccccchHHHHHHHhCCCCceEEEccCCCCC-hHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 3344444444443333333444444444444 2221 1112233 44444444444444434434333 4444
Q ss_pred eeeeecccccccCCCCCccc-----cccceeecccccCCCCCCcccC----C-CCcccEEEecCCcccccCcc----ccc
Q 002826 283 NLSLHKNFFNGSIPGSINEC-----LNLERFQVQDNGFSGDFPDKLW----S-LPRIKLIRAESNRFSGAIPD----SIS 348 (876)
Q Consensus 283 ~L~L~~N~i~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~----~-l~~L~~L~L~~N~l~~~~~~----~~~ 348 (876)
+|+|++|.+++..+..+... ++|++|++++|++++..+..+. . .++|++|++++|++++.... .+.
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~ 163 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILA 163 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHh
Confidence 44444444444333322222 4455555555555444333322 2 13555555555555533222 223
Q ss_pred cCC-CCCeeeccCcccCCCCCCcccc----c-cCccEEeCCCccccCC----CCCCcCC-CCCccEEEccCCccccCCc-
Q 002826 349 MAA-QLEQVQIDNNRFTSSIPQGLGS----V-KSLYRFSASQNSFYGS----LPPNFCD-SPVMSIINLSQNSISGQIP- 416 (876)
Q Consensus 349 ~l~-~L~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~ls~N~l~~~----~~~~~~~-~~~L~~L~Ls~N~l~~~~~- 416 (876)
... +|++|+|++|++++..+..+.. . ++|+.|++++|.+++. ++..+.. .++|+.|+|++|.+++...
T Consensus 164 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 243 (362)
T 3goz_A 164 AIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLE 243 (362)
T ss_dssp TSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHH
T ss_pred cCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHH
Confidence 333 5666666666665444433332 2 3566666666666542 2223333 2467777777777765433
Q ss_pred ----CcccccccceEeccCCcCCCCCC-------cCCCCCCCcceeeCCCCcccccCC
Q 002826 417 ----ELKKCRKLVSLSLADNSLTGEIP-------PSLAELPVLTYLDLSDNNLTGPIP 463 (876)
Q Consensus 417 ----~~~~l~~L~~L~Ls~N~l~~~~p-------~~~~~l~~L~~L~Ls~N~l~~~~p 463 (876)
.+..+++|++|+|++|++.+..+ ..+..+++|+.||+++|++.+..|
T Consensus 244 ~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 244 NLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 24566777777777777554333 356777788888888888775533
No 332
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=3.9e-24 Score=231.26 Aligned_cols=209 Identities=19% Similarity=0.172 Sum_probs=99.6
Q ss_pred CcccEEEecCCCCcccCCccc--cCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccce
Q 002826 206 EKLEQLFLQSSGFHGVIPDSF--VGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVN 283 (876)
Q Consensus 206 ~~L~~L~L~~n~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 283 (876)
++|++|++++|++++..|..+ ..+++|++|+|++|++++..+..- ...+..+++|++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~---------------------~~~~~~~~~L~~ 149 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLA---------------------ELQQWLKPGLKV 149 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHH---------------------HHHTTBCSCCCE
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhH---------------------HHHhhhccCCCE
Confidence 345555555555555444444 445555555555555543222100 012223444444
Q ss_pred eeeecccccccCCCCCccccccceeecccccCCCC--C--CcccCCCCcccEEEecCCcccccCc--c-ccccCCCCCee
Q 002826 284 LSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGD--F--PDKLWSLPRIKLIRAESNRFSGAIP--D-SISMAAQLEQV 356 (876)
Q Consensus 284 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~~--~-~~~~l~~L~~L 356 (876)
|+|++|++++..+..|..+++|++|+|++|++.+. + +..+..+++|++|++++|+++...+ . .+..+++|++|
T Consensus 150 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L 229 (310)
T 4glp_A 150 LSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSL 229 (310)
T ss_dssp EEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSE
T ss_pred EEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEE
Confidence 44444444444444444444444455544444321 1 1122344455555555555432111 1 23444555555
Q ss_pred eccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCC
Q 002826 357 QIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTG 436 (876)
Q Consensus 357 ~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 436 (876)
+|++|++++..|..+..+. .+++|++|+|++|+|+..+..+. ++|++|+|++|+|++
T Consensus 230 ~Ls~N~l~~~~p~~~~~~~---------------------~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 230 DLSHNSLRATVNPSAPRCM---------------------WSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNR 286 (310)
T ss_dssp ECTTSCCCCCCCSCCSSCC---------------------CCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCS
T ss_pred ECCCCCCCccchhhHHhcc---------------------CcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCC
Confidence 5555555544444443331 11355555555555553333332 566666677776664
Q ss_pred CCCcCCCCCCCcceeeCCCCcccc
Q 002826 437 EIPPSLAELPVLTYLDLSDNNLTG 460 (876)
Q Consensus 437 ~~p~~~~~l~~L~~L~Ls~N~l~~ 460 (876)
. |. +..+++|+.|+|++|+|+.
T Consensus 287 ~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 287 A-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp C-CC-TTSCCCCSCEECSSTTTSC
T ss_pred C-ch-hhhCCCccEEECcCCCCCC
Confidence 3 22 5666777777777777653
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.4e-23 Score=217.82 Aligned_cols=84 Identities=15% Similarity=0.170 Sum_probs=32.5
Q ss_pred ccEEEecCCCCcccCCccccCCCCCcEEecccCc-cCCCCCCccccccccccEEEecc-ccccCcCCcccccCCccceee
Q 002826 208 LEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNN-LTGEVPQSLGSSLLKLVSFDVSQ-NKLSGSFPNGICKANGLVNLS 285 (876)
Q Consensus 208 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~ip~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ 285 (876)
|++|++++|+++++.+..|.++++|++|++++|+ ++ .++...+.++++|++|++++ |++++..+..|..+++|++|+
T Consensus 33 l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 33 TQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp CCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred ccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 3333333333433333344444444444444443 33 33332233333444444443 333333333333333333333
Q ss_pred eeccccc
Q 002826 286 LHKNFFN 292 (876)
Q Consensus 286 L~~N~i~ 292 (876)
+++|+++
T Consensus 112 l~~n~l~ 118 (239)
T 2xwt_C 112 IFNTGLK 118 (239)
T ss_dssp EEEECCC
T ss_pred CCCCCCc
Confidence 3333333
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=3.7e-24 Score=231.38 Aligned_cols=203 Identities=17% Similarity=0.177 Sum_probs=120.3
Q ss_pred ccccEEEeccccccCcCCccc--ccCCccceeeeecccccccCC----CCCccccccceeecccccCCCCCCcccCCCCc
Q 002826 255 LKLVSFDVSQNKLSGSFPNGI--CKANGLVNLSLHKNFFNGSIP----GSINECLNLERFQVQDNGFSGDFPDKLWSLPR 328 (876)
Q Consensus 255 ~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~L~~N~i~~~~~----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 328 (876)
++|++|+|++|++++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|++++|++++..+..|..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 345555555555555555554 555555555555555554332 12234555555555555555555555555555
Q ss_pred ccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCC--C-CcCCCCCccEEE
Q 002826 329 IKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLP--P-NFCDSPVMSIIN 405 (876)
Q Consensus 329 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~--~-~~~~~~~L~~L~ 405 (876)
|++|++++|++.+... -..+..+..+++|++|++++|+++...+ . .+..+++|++||
T Consensus 171 L~~L~Ls~N~l~~~~~--------------------~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~ 230 (310)
T 4glp_A 171 LTSLDLSDNPGLGERG--------------------LMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLD 230 (310)
T ss_dssp CCEEECCSCTTCHHHH--------------------HHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEE
T ss_pred CCEEECCCCCCccchh--------------------hhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEE
Confidence 5555555555433100 0001122344455555555555532111 1 234556677777
Q ss_pred ccCCccccCCc-Ccccc---cccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccc-ccceEEccCCc
Q 002826 406 LSQNSISGQIP-ELKKC---RKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL-KLALFNVSFNK 480 (876)
Q Consensus 406 Ls~N~l~~~~~-~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~ls~N~ 480 (876)
|++|+|++..| .+..+ ++|++|+|++|+|+ .+|..+. ++|++|||++|+|++. |. +..+ +++.|++++|+
T Consensus 231 Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~ 305 (310)
T 4glp_A 231 LSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNP 305 (310)
T ss_dssp CTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTT
T ss_pred CCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCC
Confidence 77777777643 45554 79999999999999 6677664 8999999999999973 43 3444 58899999999
Q ss_pred cc
Q 002826 481 LS 482 (876)
Q Consensus 481 l~ 482 (876)
++
T Consensus 306 l~ 307 (310)
T 4glp_A 306 FL 307 (310)
T ss_dssp TS
T ss_pred CC
Confidence 97
No 335
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.90 E-value=7.4e-27 Score=276.66 Aligned_cols=129 Identities=16% Similarity=0.183 Sum_probs=63.7
Q ss_pred cCCCCCCeeecCCCccccccCcccc-CCCCCCcccCCCcccceeecCCcccccc-CCCccCCccccceecccccccCCCc
Q 002826 96 CELSSLSNLNLADNLFNQPIPLHLS-QCSSLETLNLSNNLIWVLDLSRNHIEGK-IPESIGSLVNLQVLNLGSNLLSGSV 173 (876)
Q Consensus 96 ~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~LdL~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~ 173 (876)
..+++|++|+|++|.+++..+..+. .+++|++|+|++|. .++.. ++..+.++++|++|+|++|.+++..
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~---------~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~ 172 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCE---------GFSTDGLAAIAATCRNLKELDLRESDVDDVS 172 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCE---------EEEHHHHHHHHHHCTTCCEEECTTCEEECCC
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcC---------CCCHHHHHHHHHhCCCCCEEeCcCCccCCcc
Confidence 3567777777777777766666665 57777777666552 11111 2222234455555555555554433
Q ss_pred Ccccc----CCCcceEEEccCCCCcCCCCC-----CcccccCcccEEEecCC-CCcccCCccccCCCCCcEEec
Q 002826 174 PFVFG----NFSELVVLDLSQNAYLISEIP-----SDIGKLEKLEQLFLQSS-GFHGVIPDSFVGLQSLSILDL 237 (876)
Q Consensus 174 p~~~~----~l~~L~~L~Ls~N~~~~~~~p-----~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L 237 (876)
+..+. .+++|++|+|++|. ..++ ..+.++++|++|+|++| .+.+ ++..+..+++|+.|++
T Consensus 173 ~~~l~~~~~~~~~L~~L~l~~~~---~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l 242 (594)
T 2p1m_B 173 GHWLSHFPDTYTSLVSLNISCLA---SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGT 242 (594)
T ss_dssp GGGGGGSCTTCCCCCEEECTTCC---SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEEC
T ss_pred hHHHHHHhhcCCcCcEEEecccC---CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEccc
Confidence 32222 33455555555553 1111 11123355555555555 2222 3444445555555553
No 336
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=4.1e-23 Score=215.90 Aligned_cols=158 Identities=16% Similarity=0.193 Sum_probs=112.4
Q ss_pred ccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCC
Q 002826 304 NLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSAS 383 (876)
Q Consensus 304 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls 383 (876)
+++.|+|++|++++..+..|.++++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+++
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 45555555555555555555555555555555555555555556666666666666666665555666666777777777
Q ss_pred CccccCCCCCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCccccc
Q 002826 384 QNSFYGSLPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGP 461 (876)
Q Consensus 384 ~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 461 (876)
+|++++..+..|..+++|+.|+|++|+|++.++ .|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++.
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 777776666667777788888888888887776 688888888899999998888888888999999999999998865
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=3.6e-25 Score=244.85 Aligned_cols=79 Identities=20% Similarity=0.169 Sum_probs=40.4
Q ss_pred eecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCC----CccCCcc-ccceecccccccCCCcCcccc
Q 002826 104 LNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIP----ESIGSLV-NLQVLNLGSNLLSGSVPFVFG 178 (876)
Q Consensus 104 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~ 178 (876)
++|++|.+++.+|..+...++|++|+|++ |.+++..+ ..|.+++ +|++|+|++|++++..+..|.
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~----------n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 72 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSL----------NNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELV 72 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTT----------SCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHH
T ss_pred cccccccchHHHHHHHhCCCCceEEEccC----------CCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHH
Confidence 45556666665555555555555543333 33333333 4444555 555666666655555454444
Q ss_pred CC-----CcceEEEccCCC
Q 002826 179 NF-----SELVVLDLSQNA 192 (876)
Q Consensus 179 ~l-----~~L~~L~Ls~N~ 192 (876)
.+ ++|++|+|++|+
T Consensus 73 ~~l~~~~~~L~~L~Ls~n~ 91 (362)
T 3goz_A 73 QILAAIPANVTSLNLSGNF 91 (362)
T ss_dssp HHHHTSCTTCCEEECCSSC
T ss_pred HHHhccCCCccEEECcCCc
Confidence 43 555555555554
No 338
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=5.7e-23 Score=214.84 Aligned_cols=181 Identities=14% Similarity=0.156 Sum_probs=128.9
Q ss_pred CCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceee
Q 002826 230 QSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQ 309 (876)
Q Consensus 230 ~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 309 (876)
.+.+++++++|.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.|++..+..|..+++|++|+
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 89 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLG 89 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCeEEecCCCCcc-ccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEE
Confidence 34667888888887 7777653 4777788888888777777777777777777777777777777777777777777
Q ss_pred cccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccC
Q 002826 310 VQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYG 389 (876)
Q Consensus 310 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 389 (876)
|++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++++
T Consensus 90 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 169 (251)
T 3m19_A 90 LANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQS 169 (251)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCc
Confidence 77777776666677777777777777777776666666667777777777777775555566666666666666666666
Q ss_pred CCCCCcCCCCCccEEEccCCccccC
Q 002826 390 SLPPNFCDSPVMSIINLSQNSISGQ 414 (876)
Q Consensus 390 ~~~~~~~~~~~L~~L~Ls~N~l~~~ 414 (876)
..+..|..+++|+.|+|++|.+++.
T Consensus 170 ~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 170 VPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCHHHHhCCCCCCEEEeeCCceeCC
Confidence 6666666666666666666666554
No 339
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1.1e-25 Score=246.57 Aligned_cols=268 Identities=18% Similarity=0.228 Sum_probs=160.5
Q ss_pred CCccccceEecCCCCCccEEEEeecCCCCCcccccccccCC--CCCCeeecCCCccccccCccccCCCCCCcccCCCccc
Q 002826 58 HYCNWTGVTCVTTATASLTVASINLQSLNLSGEISSSVCEL--SSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLI 135 (876)
Q Consensus 58 ~~C~w~gv~c~~~~~~~~~~~~l~l~~~~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 135 (876)
-|..|+++.|++. .+..+++.++.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++
T Consensus 35 vc~~W~~~~~~~~-----~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~--- 102 (336)
T 2ast_B 35 VCKRWYRLASDES-----LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSN--- 102 (336)
T ss_dssp SCHHHHHHHTCST-----TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTT---
T ss_pred HHHHHHHHhcCch-----hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccC---
Confidence 4778999988644 2445777777766 3455666 7888888888888876555 44677777665444
Q ss_pred ceeecCCcccccc-CCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCC-CCCCcccccCcccEEEe
Q 002826 136 WVLDLSRNHIEGK-IPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLIS-EIPSDIGKLEKLEQLFL 213 (876)
Q Consensus 136 ~~LdL~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~-~~p~~~~~l~~L~~L~L 213 (876)
|.+++. +|..+..+++|++|+|++|++++..+..++++++|++|+|++|..+.. .+|..+.++++|++|++
T Consensus 103 -------~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l 175 (336)
T 2ast_B 103 -------SVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNL 175 (336)
T ss_dssp -------CEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEEC
T ss_pred -------CCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcC
Confidence 444444 566677788888888888887777777777778888888887731111 24444566666666666
Q ss_pred cCC-CCccc-CCccccCCC-CCcEEecccCc--cC-CCCCCccccccccccEEEecccc-ccCcCCcccccCCccceeee
Q 002826 214 QSS-GFHGV-IPDSFVGLQ-SLSILDLSQNN--LT-GEVPQSLGSSLLKLVSFDVSQNK-LSGSFPNGICKANGLVNLSL 286 (876)
Q Consensus 214 ~~n-~l~~~-~~~~~~~l~-~L~~L~Ls~N~--l~-~~ip~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L 286 (876)
++| ++++. ++..+..++ +|++|+|++|. ++ +.+|..+ ..+++|++|++++|. +++..+..
T Consensus 176 ~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~-~~~~~L~~L~l~~~~~l~~~~~~~------------ 242 (336)
T 2ast_B 176 SWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLV-RRCPNLVHLDLSDSVMLKNDCFQE------------ 242 (336)
T ss_dssp CCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHH-HHCTTCSEEECTTCTTCCGGGGGG------------
T ss_pred CCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHH-hhCCCCCEEeCCCCCcCCHHHHHH------------
Confidence 666 66543 345555566 66666666663 33 1223222 234555555555555 44344444
Q ss_pred ecccccccCCCCCccccccceeeccccc-CCCCCCcccCCCCcccEEEecCCcccccCccccccC-CCCCeeeccCcccC
Q 002826 287 HKNFFNGSIPGSINECLNLERFQVQDNG-FSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMA-AQLEQVQIDNNRFT 364 (876)
Q Consensus 287 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~ 364 (876)
+..+++|++|++++|. +.......+..+++|+.|++++| ++ .+.+..+ .+++.|++++|+++
T Consensus 243 ------------l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~ 306 (336)
T 2ast_B 243 ------------FFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFT 306 (336)
T ss_dssp ------------GGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSC
T ss_pred ------------HhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCc
Confidence 4444555555555553 21111124555666666666666 22 2233333 23666777888888
Q ss_pred CCCCCcccc
Q 002826 365 SSIPQGLGS 373 (876)
Q Consensus 365 ~~~p~~~~~ 373 (876)
+..|..+++
T Consensus 307 ~~~~~~~~~ 315 (336)
T 2ast_B 307 TIARPTIGN 315 (336)
T ss_dssp CTTCSSCSS
T ss_pred cccCCcccc
Confidence 777776654
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=2.9e-23 Score=223.94 Aligned_cols=207 Identities=18% Similarity=0.302 Sum_probs=119.4
Q ss_pred EecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccc
Q 002826 212 FLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFF 291 (876)
Q Consensus 212 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i 291 (876)
.+..+.+.... .+..+++|++|++++|+++ .+|. + ..+++|++|+|++|++++..+ +..+++|++|+|++|++
T Consensus 25 ~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~l~~-~-~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 25 AAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIEG-V-QYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPL 97 (308)
T ss_dssp HTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCTT-G-GGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCC
T ss_pred HhCCCCcCcee--cHHHcCCcCEEEeeCCCcc-Cchh-h-hccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcC
Confidence 34444444322 2344556666666666665 4442 2 335555555555555553332 55555555555555555
Q ss_pred cccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCcc
Q 002826 292 NGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGL 371 (876)
Q Consensus 292 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 371 (876)
++. ..+..+++|+.|++++|++++.. .+..+++|++|++++|++++..+ +
T Consensus 98 ~~~--------------------------~~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l 147 (308)
T 1h6u_A 98 KNV--------------------------SAIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--L 147 (308)
T ss_dssp SCC--------------------------GGGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--G
T ss_pred CCc--------------------------hhhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--c
Confidence 432 13444555555555555555432 15555556666666666554332 5
Q ss_pred ccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCCCccee
Q 002826 372 GSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYL 451 (876)
Q Consensus 372 ~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 451 (876)
..+++|+.|++++|.+++..+ +..+++|+.|++++|++++.++ +..+++|++|+|++|++++..| +..+++|+.|
T Consensus 148 ~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L 222 (308)
T 1h6u_A 148 AGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIV 222 (308)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEE
T ss_pred cCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCcccc--ccCCCCCCEE
Confidence 556666666666666654333 6666777777777777765544 6777778888888888775543 7777888888
Q ss_pred eCCCCcccc
Q 002826 452 DLSDNNLTG 460 (876)
Q Consensus 452 ~Ls~N~l~~ 460 (876)
+|++|++++
T Consensus 223 ~l~~N~i~~ 231 (308)
T 1h6u_A 223 TLTNQTITN 231 (308)
T ss_dssp EEEEEEEEC
T ss_pred EccCCeeec
Confidence 888888774
No 341
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.2e-25 Score=251.25 Aligned_cols=247 Identities=18% Similarity=0.190 Sum_probs=114.2
Q ss_pred CCCccCCccccceecccccccCCCcC----ccccCCCcceEEEccCCCC--cCCCCCCcc-------cccCcccEEEecC
Q 002826 149 IPESIGSLVNLQVLNLGSNLLSGSVP----FVFGNFSELVVLDLSQNAY--LISEIPSDI-------GKLEKLEQLFLQS 215 (876)
Q Consensus 149 ~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~~--~~~~~p~~~-------~~l~~L~~L~L~~ 215 (876)
++..+..+++|++|+|++|++++..+ ..|..+++|++|+|++|.+ +.+.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 44455555666666666666654422 2345566666666666531 111223222 3445555555555
Q ss_pred CCCcc----cCCccccCCCCCcEEecccCccCCCCCCccccc---c---------ccccEEEecccccc-CcCC---ccc
Q 002826 216 SGFHG----VIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSS---L---------LKLVSFDVSQNKLS-GSFP---NGI 275 (876)
Q Consensus 216 n~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~---l---------~~L~~L~L~~N~l~-~~~~---~~~ 275 (876)
|++++ .+|..+..+++|++|+|++|.|++..+..+... + ++|++|+|++|+++ +..+ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 55554 244445555555555555555542222111111 1 45555555555544 1222 233
Q ss_pred ccCCccceeeeeccccc--c---cCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccC
Q 002826 276 CKANGLVNLSLHKNFFN--G---SIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMA 350 (876)
Q Consensus 276 ~~l~~L~~L~L~~N~i~--~---~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 350 (876)
..+++|++|+|++|+|+ + ..+..+..+++|+.|+|++|.++... .+.+|..+..+
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g--------------------~~~l~~~l~~~ 243 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLG--------------------SSALAIALKSW 243 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHH--------------------HHHHHHHGGGC
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHH--------------------HHHHHHHHccC
Confidence 34445555555555444 1 22223444444444444444443000 03334444444
Q ss_pred CCCCeeeccCcccCCC----CCCcc--ccccCccEEeCCCccccC----CCCCCc-CCCCCccEEEccCCccccCC
Q 002826 351 AQLEQVQIDNNRFTSS----IPQGL--GSVKSLYRFSASQNSFYG----SLPPNF-CDSPVMSIINLSQNSISGQI 415 (876)
Q Consensus 351 ~~L~~L~L~~N~l~~~----~p~~~--~~l~~L~~L~ls~N~l~~----~~~~~~-~~~~~L~~L~Ls~N~l~~~~ 415 (876)
++|+.|+|++|++++. +|..+ +.+++|+.|++++|.+++ .+|..+ .++++|+.|+|++|.+++..
T Consensus 244 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 244 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 4455555555544433 23333 224555555555555554 244444 34566666677777766554
No 342
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.89 E-value=3.3e-27 Score=279.63 Aligned_cols=369 Identities=14% Similarity=0.165 Sum_probs=268.0
Q ss_pred EEEEeecCCCCCccccccccc-CCCCCCeeecCCC-ccccc-cCccccCCCCCCcccCCCcccceeecCCccccccCC--
Q 002826 76 TVASINLQSLNLSGEISSSVC-ELSSLSNLNLADN-LFNQP-IPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIP-- 150 (876)
Q Consensus 76 ~~~~l~l~~~~l~~~~~~~~~-~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p-- 150 (876)
.+..++|.++.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+ ++..+
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i----------~~~~~~~ 175 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDV----------DDVSGHW 175 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEE----------ECCCGGG
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCcc----------CCcchHH
Confidence 466788999999888777776 6999999999999 55543 455566899999987776654 33322
Q ss_pred --CccCCccccceecccccc--cCC-CcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCC-------CC
Q 002826 151 --ESIGSLVNLQVLNLGSNL--LSG-SVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSS-------GF 218 (876)
Q Consensus 151 --~~~~~l~~L~~L~L~~N~--l~~-~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n-------~l 218 (876)
.....+++|++|+|++|. ++. ..+..+.++++|++|+|++|. ..+.+|..+..+++|++|+++.+ .+
T Consensus 176 l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~-~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~ 254 (594)
T 2p1m_B 176 LSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAV-PLEKLATLLQRAPQLEELGTGGYTAEVRPDVY 254 (594)
T ss_dssp GGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTS-CHHHHHHHHHHCTTCSEEECSBCCCCCCHHHH
T ss_pred HHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCC-cHHHHHHHHhcCCcceEcccccccCccchhhH
Confidence 333467899999999997 221 122223457999999999995 24457777889999999996554 34
Q ss_pred cccCCccccCCCCCcEE-ecccCccCCCCCCccccccccccEEEeccccccCcCCc-ccccCCccceeeeeccccccc-C
Q 002826 219 HGVIPDSFVGLQSLSIL-DLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPN-GICKANGLVNLSLHKNFFNGS-I 295 (876)
Q Consensus 219 ~~~~~~~~~~l~~L~~L-~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~i~~~-~ 295 (876)
.+. +..+.++++|+.| .+.+.... .+|..+ ..+++|++|+|++|.+++.... .+..+++|++|++++| ++.. .
T Consensus 255 ~~l-~~~l~~~~~L~~Ls~~~~~~~~-~l~~~~-~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l 330 (594)
T 2p1m_B 255 SGL-SVALSGCKELRCLSGFWDAVPA-YLPAVY-SVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGL 330 (594)
T ss_dssp HHH-HHHHHTCTTCCEEECCBTCCGG-GGGGGH-HHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHH
T ss_pred HHH-HHHHhcCCCcccccCCcccchh-hHHHHH-HhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHH
Confidence 443 3478899999999 55544332 444433 3588999999999997754322 3567899999999998 4422 2
Q ss_pred CCCCccccccceeecc---------cccCCCCCCcccC-CCCcccEEEecCCcccccCccccc-cCCCCCeeecc--C--
Q 002826 296 PGSINECLNLERFQVQ---------DNGFSGDFPDKLW-SLPRIKLIRAESNRFSGAIPDSIS-MAAQLEQVQID--N-- 360 (876)
Q Consensus 296 ~~~~~~l~~L~~L~L~---------~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~--~-- 360 (876)
+.....+++|++|++. .|.+++.....+. ++++|+.|.++.|.+++.....+. .+++|+.|+++ +
T Consensus 331 ~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~ 410 (594)
T 2p1m_B 331 EVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPK 410 (594)
T ss_dssp HHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTT
T ss_pred HHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCC
Confidence 2223458899999983 3556544333343 489999999999999887766665 58999999999 4
Q ss_pred --cccCCCCC-----CccccccCccEEeCCCccccCCCCCCcCC-CCCccEEEccCCccccCCc-Cc-ccccccceEecc
Q 002826 361 --NRFTSSIP-----QGLGSVKSLYRFSASQNSFYGSLPPNFCD-SPVMSIINLSQNSISGQIP-EL-KKCRKLVSLSLA 430 (876)
Q Consensus 361 --N~l~~~~p-----~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~~~L~~L~Ls~N~l~~~~~-~~-~~l~~L~~L~Ls 430 (876)
|.+++... ..+..+++|+.|++++ .+++..+..+.. +++|+.|+|++|.+++... .+ ..+++|++|+|+
T Consensus 411 ~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~ 489 (594)
T 2p1m_B 411 APDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIR 489 (594)
T ss_dssp CCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEE
T ss_pred CcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECc
Confidence 66663221 2256788999999987 666555555554 7899999999999976433 44 678999999999
Q ss_pred CCcCCCCCCc-CCCCCCCcceeeCCCCcccc
Q 002826 431 DNSLTGEIPP-SLAELPVLTYLDLSDNNLTG 460 (876)
Q Consensus 431 ~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~ 460 (876)
+|++++.... ....+++|++|++++|+++.
T Consensus 490 ~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 490 DCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp SCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred CCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 9999654443 44568999999999999854
No 343
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=1.7e-22 Score=222.29 Aligned_cols=200 Identities=16% Similarity=0.142 Sum_probs=115.8
Q ss_pred eEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccE-EEe
Q 002826 184 VVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVS-FDV 262 (876)
Q Consensus 184 ~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~-L~L 262 (876)
++++.++|+ ++++|..+. +++++|+|++|+|+.+.+++|.++++|++|+|++|++.+.+|...|.++++|.+ +.+
T Consensus 12 ~~v~C~~~~--Lt~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESK--VTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTT--CCSCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCC--CCccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 345666665 556666552 467777777777776666777777788888888887765677766666776654 555
Q ss_pred ccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeeccc-ccCCCCCCcccCCCC-cccEEEecCCccc
Q 002826 263 SQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQD-NGFSGDFPDKLWSLP-RIKLIRAESNRFS 340 (876)
Q Consensus 263 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~L~~N~l~ 340 (876)
+.|+|+...|..|..+++|++|++++|+|+...+..+....++..|++.+ |++....+..|..+. .++.|++++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 66777766666777777777777777777666665666666666666644 445544444444443 3455555555555
Q ss_pred ccCccccccCCCCCeeeccC-cccCCCCCCccccccCccEEeCCCcccc
Q 002826 341 GAIPDSISMAAQLEQVQIDN-NRFTSSIPQGLGSVKSLYRFSASQNSFY 388 (876)
Q Consensus 341 ~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 388 (876)
.+.+..|. ..+|+.|++++ |.++...+..|.++++|+.|++++|+|+
T Consensus 168 ~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 168 EIHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp EECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred CCChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 43333332 23444444432 3333222233444444444444444444
No 344
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89 E-value=5e-24 Score=246.74 Aligned_cols=181 Identities=16% Similarity=0.154 Sum_probs=145.7
Q ss_pred CCCCCCceEEEEEEeCCCcEEEEEEEecCCccC--------HHHHHHHHHHHhhccCccccceeeEEEeCCeEEEEEEcC
Q 002826 589 AGNGGPFGRVYILSLPSGELIAVKKLVNFGCQS--------SKTLKTEVKTLAKIRHKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 589 ~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
..+.|+||+||+++. .++.+|+|+........ .+++.+|++++++++||||+++..++...+..|+||||+
T Consensus 343 ~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~ 421 (540)
T 3en9_A 343 LIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYI 421 (540)
T ss_dssp -----CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECC
T ss_pred EEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECC
Confidence 444455999999954 68899999875432221 235789999999999999997777777777889999999
Q ss_pred CCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhcccccccc-
Q 002826 661 QMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQS- 739 (876)
Q Consensus 661 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~- 739 (876)
++++|.+++.+ +..++.|+++|++|||++ +|+||||||+|||++. ++||+|||+++.........
T Consensus 422 ~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 422 NGKLAKDVIED---------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp CSEEHHHHSTT---------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred CCCCHHHHHHH---------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 99999999865 568999999999999999 9999999999999998 99999999998876432211
Q ss_pred ----ccccccccccccCccccCC--CCCCCccchHHHHHHHHHHHhCCCCC
Q 002826 740 ----TMSSEYALSCYNAPEYGYS--KKATAQMDAYSFGVVLLELITGRQAE 784 (876)
Q Consensus 740 ----~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlGv~l~elltg~~p~ 784 (876)
......||+.|||||++.. ..|+...|+|+..+-..+-+.++.+|
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 1234568999999999875 45777889999999999988887765
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=5.5e-23 Score=221.70 Aligned_cols=189 Identities=20% Similarity=0.329 Sum_probs=93.6
Q ss_pred ccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEec
Q 002826 158 NLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDL 237 (876)
Q Consensus 158 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 237 (876)
++..+.+..+.+++.++ +..+++|++|++++|. +..+| .+..+++|++|+|++|++++..+ +.++++|++|+|
T Consensus 20 ~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~--i~~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L 92 (308)
T 1h6u_A 20 NAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTG--VTTIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELEL 92 (308)
T ss_dssp HHHHHHTTCSSTTSEEC--HHHHHTCCEEECTTSC--CCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEEC
T ss_pred HHHHHHhCCCCcCceec--HHHcCCcCEEEeeCCC--ccCch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEc
Confidence 34444555555543322 3345556666666665 33444 35555556666666665554433 556666666666
Q ss_pred ccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCC
Q 002826 238 SQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSG 317 (876)
Q Consensus 238 s~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 317 (876)
++|+++ .++ . +..+++|++|+|++|++++. + .+..+++|++|++++|.+++..+ +..+++|+.|++++|++++
T Consensus 93 ~~n~l~-~~~-~-~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 93 SGNPLK-NVS-A-IAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CSCCCS-CCG-G-GTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred cCCcCC-Cch-h-hcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC
Confidence 666665 333 1 23355566666666655532 2 15555555555555555554332 4444555555555555543
Q ss_pred CCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccC
Q 002826 318 DFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFT 364 (876)
Q Consensus 318 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 364 (876)
..+ +..+++|+.|++++|++++..+ +..+++|++|++++|+++
T Consensus 166 ~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 166 LTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCC
T ss_pred Chh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccC
Confidence 222 4444444444444444443322 334444444444444444
No 346
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=2.3e-25 Score=248.84 Aligned_cols=227 Identities=20% Similarity=0.276 Sum_probs=120.5
Q ss_pred ccCCCCCcEEecccCcc---CCCCCCcc------ccccccccEEEeccccccC----cCCcccccCCccceeeeeccccc
Q 002826 226 FVGLQSLSILDLSQNNL---TGEVPQSL------GSSLLKLVSFDVSQNKLSG----SFPNGICKANGLVNLSLHKNFFN 292 (876)
Q Consensus 226 ~~~l~~L~~L~Ls~N~l---~~~ip~~~------~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~i~ 292 (876)
|..+++|++|+|++|.+ ++.+|..+ +..+++|++|+|++|++++ .+|..+..+++|++|+|++|.|+
T Consensus 56 l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 56 IASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp TTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred HHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 44555566666655432 22333322 1234555555555555554 24444555555555555555554
Q ss_pred ccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCccc-ccCc---cccccCCCCCeeeccCcccCC---
Q 002826 293 GSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFS-GAIP---DSISMAAQLEQVQIDNNRFTS--- 365 (876)
Q Consensus 293 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~---~~~~~l~~L~~L~L~~N~l~~--- 365 (876)
...+..+... |.. +..|.+++. .++|++|++++|+++ +.++ ..+..+++|++|+|++|+++.
T Consensus 136 ~~~~~~l~~~--l~~--l~~~~~~~~-------~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~ 204 (386)
T 2ca6_A 136 PQAGAKIARA--LQE--LAVNKKAKN-------APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGI 204 (386)
T ss_dssp HHHHHHHHHH--HHH--HHHHHHHHT-------CCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHH
T ss_pred HHHHHHHHHH--HHH--Hhhhhhccc-------CCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHH
Confidence 3322222211 000 000000000 034444444444443 1222 234445555555555555541
Q ss_pred --CCCCccccccCccEEeCCCcccc----CCCCCCcCCCCCccEEEccCCccccC----Cc-Cc--ccccccceEeccCC
Q 002826 366 --SIPQGLGSVKSLYRFSASQNSFY----GSLPPNFCDSPVMSIINLSQNSISGQ----IP-EL--KKCRKLVSLSLADN 432 (876)
Q Consensus 366 --~~p~~~~~l~~L~~L~ls~N~l~----~~~~~~~~~~~~L~~L~Ls~N~l~~~----~~-~~--~~l~~L~~L~Ls~N 432 (876)
..|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ++ .+ +.+++|++|+|++|
T Consensus 205 ~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n 284 (386)
T 2ca6_A 205 EHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYN 284 (386)
T ss_dssp HHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSS
T ss_pred HHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCC
Confidence 23335555666666666666664 44555666677777777777777654 22 34 34788888888888
Q ss_pred cCCC----CCCcCC-CCCCCcceeeCCCCcccccCC
Q 002826 433 SLTG----EIPPSL-AELPVLTYLDLSDNNLTGPIP 463 (876)
Q Consensus 433 ~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~p 463 (876)
++++ .+|..+ .++++|++|+|++|++++..|
T Consensus 285 ~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 285 EIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred cCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 8886 366666 668888899999998886554
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=5.4e-22 Score=218.19 Aligned_cols=238 Identities=15% Similarity=0.118 Sum_probs=141.7
Q ss_pred cEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCC-cccccCCccce-eee
Q 002826 209 EQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFP-NGICKANGLVN-LSL 286 (876)
Q Consensus 209 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~-L~L 286 (876)
++++.++++++.+ |..+ .+++++|+|++|+|+ .+|...|.++++|++|+|++|++.+.+| ..|.+++++.+ +.+
T Consensus 12 ~~v~C~~~~Lt~i-P~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVTEI-PSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCCSC-CTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCCcc-CcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 4566667777643 4433 246777777777777 6666666667777777777777654443 45666666554 555
Q ss_pred ecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecC-CcccccCccccccCC-CCCeeeccCcccC
Q 002826 287 HKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAES-NRFSGAIPDSISMAA-QLEQVQIDNNRFT 364 (876)
Q Consensus 287 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 364 (876)
+.|+|+.+.|+.|..+++|++|++++|++++..+..+....++..|++.+ |++....+..|..+. .++.|+|++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 66777766677777777777777777777766666666666666666644 556655555555543 4666677777766
Q ss_pred CCCCCccccccCccEEeCCC-ccccCCCCCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCC-cCCCCCCcC
Q 002826 365 SSIPQGLGSVKSLYRFSASQ-NSFYGSLPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADN-SLTGEIPPS 441 (876)
Q Consensus 365 ~~~p~~~~~l~~L~~L~ls~-N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N-~l~~~~p~~ 441 (876)
. +|.......+|+.+++++ |.++.+.+..|.++++|++|||++|+|+..++ .|.+ |+.|.+.++ +++ .+| .
T Consensus 168 ~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~---L~~L~~l~~~~l~-~lP-~ 241 (350)
T 4ay9_X 168 E-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN---LKKLRARSTYNLK-KLP-T 241 (350)
T ss_dssp E-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT---CCEEECTTCTTCC-CCC-C
T ss_pred C-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc---chHhhhccCCCcC-cCC-C
Confidence 3 333333445566666653 44554444556666666666666666665544 2333 333332222 233 444 2
Q ss_pred CCCCCCcceeeCCCC
Q 002826 442 LAELPVLTYLDLSDN 456 (876)
Q Consensus 442 ~~~l~~L~~L~Ls~N 456 (876)
+..+++|+.++++++
T Consensus 242 l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 242 LEKLVALMEASLTYP 256 (350)
T ss_dssp TTTCCSCCEEECSCH
T ss_pred chhCcChhhCcCCCC
Confidence 556666666666554
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.7e-24 Score=236.93 Aligned_cols=235 Identities=14% Similarity=0.155 Sum_probs=143.3
Q ss_pred cccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEe
Q 002826 157 VNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILD 236 (876)
Q Consensus 157 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 236 (876)
++++.|++++|.+++..+. +..+++|++|+|++|.+....+|..+..+++|++|+|++|++++..+..+..+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4555555555555544443 334555555555555421111444455556666666666666655666666677777777
Q ss_pred cccC-ccCCC-CCCccccccccccEEEeccc-cccCc-CCcccccCC-ccceeeeecc--ccc-ccCCCCCcccccccee
Q 002826 237 LSQN-NLTGE-VPQSLGSSLLKLVSFDVSQN-KLSGS-FPNGICKAN-GLVNLSLHKN--FFN-GSIPGSINECLNLERF 308 (876)
Q Consensus 237 Ls~N-~l~~~-ip~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~L~~N--~i~-~~~~~~~~~l~~L~~L 308 (876)
|++| .+++. ++.. +..+++|++|++++| ++++. ++..+..++ +|++|+|++| .++ +.++..+..+++|++|
T Consensus 149 L~~~~~l~~~~l~~~-~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L 227 (336)
T 2ast_B 149 LSGCSGFSEFALQTL-LSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 227 (336)
T ss_dssp CTTCBSCCHHHHHHH-HHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEE
T ss_pred CCCCCCCCHHHHHHH-HhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEE
Confidence 7777 55532 3322 334667777777777 66643 455566777 7777777777 344 3445566677788888
Q ss_pred eccccc-CCCCCCcccCCCCcccEEEecCCc-ccccCccccccCCCCCeeeccCcccCCCCCCcccccc-CccEEeCCCc
Q 002826 309 QVQDNG-FSGDFPDKLWSLPRIKLIRAESNR-FSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVK-SLYRFSASQN 385 (876)
Q Consensus 309 ~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ls~N 385 (876)
++++|. +++..+..+..+++|+.|++++|. ++......+..+++|+.|++++| ++ ...+..+. .+..|++++|
T Consensus 228 ~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n 303 (336)
T 2ast_B 228 DLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCS 303 (336)
T ss_dssp ECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCC
T ss_pred eCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecc
Confidence 888887 666777778888888888888884 33222235677778888888877 33 22333332 3555566777
Q ss_pred cccCCCCCCcCC
Q 002826 386 SFYGSLPPNFCD 397 (876)
Q Consensus 386 ~l~~~~~~~~~~ 397 (876)
++++..|..+..
T Consensus 304 ~l~~~~~~~~~~ 315 (336)
T 2ast_B 304 HFTTIARPTIGN 315 (336)
T ss_dssp CSCCTTCSSCSS
T ss_pred cCccccCCcccc
Confidence 777666665543
No 349
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=2.7e-22 Score=232.03 Aligned_cols=215 Identities=21% Similarity=0.315 Sum_probs=110.9
Q ss_pred CCCCCCCCCCCCc-----cccce-EecCCCCCccEEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccC
Q 002826 48 LSTWSNTSNIHYC-----NWTGV-TCVTTATASLTVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQ 121 (876)
Q Consensus 48 ~~sW~~~~~~~~C-----~w~gv-~c~~~~~~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 121 (876)
+.+|... .++| .|.|+ .|... .+..+++.++++++ +|..+. ++|++|+|++|.|+. +| ..
T Consensus 33 l~~W~~~--~~~~~~~~~~~~~l~~C~~~-----~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-ip---~~ 98 (571)
T 3cvr_A 33 WDKWEKQ--ALPGENRNEAVSLLKECLIN-----QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LP---EL 98 (571)
T ss_dssp HHHHHTT--CCTTCCHHHHHHHHHHHHHT-----TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-CC---CC
T ss_pred HHHHhcc--CCccccccchhhhccccccC-----CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-cc---cc
Confidence 4457432 3567 79999 78643 34556666666665 555442 566666666666653 44 33
Q ss_pred CCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCc
Q 002826 122 CSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSD 201 (876)
Q Consensus 122 l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~ 201 (876)
+++|++|+| ++|+|++ +|. |.+ +|++|+|++|+|++ +|. .+++|++|+|++|+ ++.+|.
T Consensus 99 l~~L~~L~L----------s~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~--l~~lp~- 157 (571)
T 3cvr_A 99 PASLEYLDA----------CDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQ--LTMLPE- 157 (571)
T ss_dssp CTTCCEEEC----------CSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC--CSCCCC-
T ss_pred cCCCCEEEc----------cCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCc--cCcCCC-
Confidence 445554433 3333443 444 443 56666666666654 333 45556666666665 333444
Q ss_pred ccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCcc
Q 002826 202 IGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGL 281 (876)
Q Consensus 202 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (876)
.+++|++|+|++|+|++ +|. |. ++|++|+|++|+|+ .+|. +.. +| +...+.|
T Consensus 158 --~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~---~L-----------------~~~~~~L 209 (571)
T 3cvr_A 158 --LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV---RN-----------------HHSEETE 209 (571)
T ss_dssp --CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------------------------CC
T ss_pred --cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH---hh-----------------hcccccc
Confidence 34455555555555554 333 33 55555555555555 4444 221 33 0000111
Q ss_pred ceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCC
Q 002826 282 VNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSL 326 (876)
Q Consensus 282 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 326 (876)
+.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..+..+
T Consensus 210 ~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 210 IFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp EEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred eEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 55555555555 344444455666666666666665555555443
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=3.4e-21 Score=195.19 Aligned_cols=180 Identities=18% Similarity=0.229 Sum_probs=115.1
Q ss_pred EEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEecc
Q 002826 185 VLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQ 264 (876)
Q Consensus 185 ~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~ 264 (876)
.++++++. +..+|..+ .++|++|++++|+++++.+..|.++++|++|+|++|+++ .+|...+..+++|++|+|++
T Consensus 11 ~v~c~~~~--l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 11 TVECYSQG--RTSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEECCSSC--CSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred EEEecCCC--ccCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-ccChhhcCCCCCcCEEECCC
Confidence 44455554 34444433 235666666666666655556666667777777777666 55555555566677777776
Q ss_pred ccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCc
Q 002826 265 NKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIP 344 (876)
Q Consensus 265 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 344 (876)
|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|++++|++++..+..+..+++|+.|++++|.+.+.
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-- 163 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-- 163 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC--
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC--
Confidence 666655555566666777777777777666666666777777777777777766665666677777777777765532
Q ss_pred cccccCCCCCeeeccCcccCCCCCCccccccC
Q 002826 345 DSISMAAQLEQVQIDNNRFTSSIPQGLGSVKS 376 (876)
Q Consensus 345 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 376 (876)
+++|++|+++.|+++|.+|..++.++.
T Consensus 164 -----~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 164 -----CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp -----TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred -----CCCHHHHHHHHHhCCceeeccCccccC
Confidence 345777777777777777776665543
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=3e-21 Score=195.58 Aligned_cols=181 Identities=17% Similarity=0.155 Sum_probs=101.5
Q ss_pred cEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeeccc
Q 002826 233 SILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQD 312 (876)
Q Consensus 233 ~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 312 (876)
+.++++++.++ .+|..+ .++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++
T Consensus 10 ~~v~c~~~~l~-~~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI---PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCcc-CCCCCC---CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 45666666666 566544 23566666666666654444455555555555555555544444445555555555555
Q ss_pred ccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCC
Q 002826 313 NGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLP 392 (876)
Q Consensus 313 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~ 392 (876)
|++++. .+..|..+++|++|++++|++++..+..+..+++|+.|++++|.+++..+
T Consensus 86 n~l~~~------------------------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 141 (208)
T 2o6s_A 86 NQLQSL------------------------PNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPD 141 (208)
T ss_dssp SCCCCC------------------------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcc------------------------CHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCH
Confidence 544443 33444444455555555555554444445555555555555555555555
Q ss_pred CCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCCC
Q 002826 393 PNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPV 447 (876)
Q Consensus 393 ~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 447 (876)
..|..+++|+.|++++|.+.+ .+++|++|+++.|+++|.+|..++.++.
T Consensus 142 ~~~~~l~~L~~L~l~~N~~~~------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 142 GVFDRLTSLQYIWLHDNPWDC------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTTTCTTCCEEECCSCCBCC------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred HHhccCCCccEEEecCCCeec------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 555556666666666665543 3456677777777777777777766554
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=3.8e-21 Score=222.48 Aligned_cols=168 Identities=25% Similarity=0.375 Sum_probs=97.4
Q ss_pred cccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEe
Q 002826 157 VNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILD 236 (876)
Q Consensus 157 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 236 (876)
++|++|+|++|+|+ .+| ..+++|++|+|++|+ ++.+|. +.+ +|++|+|++|+|++ +|. .+++|++|+
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~--l~~ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 146 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNR--LSTLPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYIN 146 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSC--CSCCCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCC--CCCcch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEe
Confidence 45555555555555 333 234555555555554 333554 433 55555565555655 333 456666666
Q ss_pred cccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCcccccc-------ceee
Q 002826 237 LSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNL-------ERFQ 309 (876)
Q Consensus 237 Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L-------~~L~ 309 (876)
|++|+|+ .+|. .+++|++|+|++|+|++ +|. |. ++|++|+|++|+|+ .+|. |.. +| +.|+
T Consensus 147 Ls~N~l~-~lp~----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~ 213 (571)
T 3cvr_A 147 ADNNQLT-MLPE----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFR 213 (571)
T ss_dssp CCSSCCS-CCCC----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEE
T ss_pred CCCCccC-cCCC----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEe
Confidence 6666666 3554 24566666666666664 444 44 66666666666666 3343 443 55 7777
Q ss_pred cccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCC
Q 002826 310 VQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAA 351 (876)
Q Consensus 310 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 351 (876)
|++|+|+ .+|..+..+++|+.|+|++|++++.+|..+..+.
T Consensus 214 Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 214 CRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred cCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 7777777 4566666677777777777777777776665543
No 353
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=5.4e-22 Score=238.13 Aligned_cols=238 Identities=18% Similarity=0.156 Sum_probs=118.6
Q ss_pred ChhHHHHHHHHHhhccCC-CCCCCCCCCCCCCCCccccceEecCCCCCccEEEEeecCCCCCcccccccccCCCCCCeee
Q 002826 27 ASTEKDTLLSFKASIDDS-KNSLSTWSNTSNIHYCNWTGVTCVTTATASLTVASINLQSLNLSGEISSSVCELSSLSNLN 105 (876)
Q Consensus 27 ~~~~~~all~~k~~~~~~-~~~~~sW~~~~~~~~C~w~gv~c~~~~~~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~ 105 (876)
...++++|+++..+...+ ...-.+|... +...+.|.+++++.. ++..++|..
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~-----~~~~l~L~~--------------------- 182 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGD-STPSGTATNSAVSTP-----LTPKIELFA--------------------- 182 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCC-CCccccCCCceecCC-----ccceEEeeC---------------------
Confidence 467889999999887533 2234467533 245677888877654 344444444
Q ss_pred cCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceE
Q 002826 106 LADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVV 185 (876)
Q Consensus 106 L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 185 (876)
|.+... | ...|+.++|++|.|..++++.|.+. ..|+.|..+++|++|+|++|+++ .+|..+.++++|++
T Consensus 183 ---n~~~~~-~-----~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~ 251 (727)
T 4b8c_D 183 ---NGKDEA-N-----QALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTR 251 (727)
T ss_dssp -------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSC
T ss_pred ---CCCCcc-h-----hhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCE
Confidence 444331 1 1234555666666666777777776 66778888888888888888887 56666668888888
Q ss_pred EEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccc
Q 002826 186 LDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQN 265 (876)
Q Consensus 186 L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N 265 (876)
|+|++|. +..+|..|.++++|++|+|++|+|+ .+|..|.+|++|++|+|++|.|+ .+|..+ ..+++|++|+|++|
T Consensus 252 L~Ls~N~--l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~-~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 252 LYLNGNS--LTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEF-GNLCNLQFLGVEGN 326 (727)
T ss_dssp CBCTTSC--CSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSST-TSCTTCCCEECTTS
T ss_pred EEeeCCc--CcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhh-hcCCCccEEeCCCC
Confidence 8888887 4477877888888888888888888 55777888888888888888887 777774 45888888888888
Q ss_pred cccCcCCcccccCCc-cceeeeecccccccCCCCCccccccceeecccc
Q 002826 266 KLSGSFPNGICKANG-LVNLSLHKNFFNGSIPGSINECLNLERFQVQDN 313 (876)
Q Consensus 266 ~l~~~~~~~~~~l~~-L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 313 (876)
+|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|+++.|
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 888777777655432 234677777777766653 344555555
No 354
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=3.3e-20 Score=190.76 Aligned_cols=160 Identities=26% Similarity=0.318 Sum_probs=130.9
Q ss_pred CCCccccceEecCCCCCccEEEEeecCCCCCcccccccccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccc
Q 002826 57 IHYCNWTGVTCVTTATASLTVASINLQSLNLSGEISSSVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIW 136 (876)
Q Consensus 57 ~~~C~w~gv~c~~~~~~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 136 (876)
.+.|.|++|.|..... +.+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++
T Consensus 16 ~~~Cs~~~v~c~~~~l----------------~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~---- 73 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRH----------------ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGS---- 73 (229)
T ss_dssp TCEEETTEEECTTSCC----------------SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS----
T ss_pred CCEEeCCEeEccCCCc----------------CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCC----
Confidence 3789999999975531 23444433 8899999999999999899999999999885554
Q ss_pred eeecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCC
Q 002826 137 VLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSS 216 (876)
Q Consensus 137 ~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n 216 (876)
|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+ +..+|..+..+++|++|+|++|
T Consensus 74 ------N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~--l~~lp~~~~~l~~L~~L~L~~N 145 (229)
T 3e6j_A 74 ------NQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNK--LTELPRGIERLTHLTHLALDQN 145 (229)
T ss_dssp ------SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC--CCSCCTTGGGCTTCSEEECCSS
T ss_pred ------CCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCc--ccccCcccccCCCCCEEECCCC
Confidence 45555556778899999999999999998888888999999999999998 5688888888888888888888
Q ss_pred CCcccCCccccCCCCCcEEecccCccCCCC
Q 002826 217 GFHGVIPDSFVGLQSLSILDLSQNNLTGEV 246 (876)
Q Consensus 217 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~i 246 (876)
+|+++.+..|..+++|++|+|++|.++...
T Consensus 146 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 146 QLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred cCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 888877777888888888888888887443
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=1.4e-20 Score=200.92 Aligned_cols=189 Identities=20% Similarity=0.288 Sum_probs=95.1
Q ss_pred ccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEec
Q 002826 158 NLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDL 237 (876)
Q Consensus 158 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 237 (876)
++..+.+..+.+++..+ +..+++|++|++++|. +..+| .+..+++|++|+|++|++++..+ +.++++|++|+|
T Consensus 25 ~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~--i~~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l 97 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSD--IKSVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFL 97 (291)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSC--CCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred HHHHHHhcCCCcccccc--hhhcCcccEEEccCCC--cccCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEEC
Confidence 33444444444443222 2344555555555554 33333 24455555555555555554433 555555555555
Q ss_pred ccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCC
Q 002826 238 SQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSG 317 (876)
Q Consensus 238 s~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 317 (876)
++|+++ .+|. +..+++|++|+|++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++
T Consensus 98 ~~n~l~-~~~~--l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~ 170 (291)
T 1h6t_A 98 DENKVK-DLSS--LKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 170 (291)
T ss_dssp CSSCCC-CGGG--GTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred CCCcCC-CChh--hccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc
Confidence 555555 3332 23355555555555555532 3455555555555555555543 345555555555555555554
Q ss_pred CCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccC
Q 002826 318 DFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFT 364 (876)
Q Consensus 318 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 364 (876)
..+ +..+++|+.|++++|++++. + .+..+++|+.|++++|+++
T Consensus 171 ~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 171 IVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred chh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 433 55555555555555555542 2 2555555555555555555
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=3.1e-20 Score=217.35 Aligned_cols=172 Identities=19% Similarity=0.268 Sum_probs=90.8
Q ss_pred cCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCC
Q 002826 153 IGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSL 232 (876)
Q Consensus 153 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 232 (876)
+..|++|+.|+|++|.++.. | .|..+++|+.|+|++|+ +..+|. +..+++|+.|+|++|+++++ ..+..+++|
T Consensus 39 ~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~--l~~~~~-l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L 111 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNK--LTDIKP-LTNLKNLGWLFLDENKIKDL--SSLKDLKKL 111 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSC--CCCCGG-GGGCTTCCEEECCSSCCCCC--TTSTTCTTC
T ss_pred hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCC--CCCChh-hccCCCCCEEECcCCCCCCC--hhhccCCCC
Confidence 34566666666666666532 2 35666666666666665 334443 55566666666666666542 245555666
Q ss_pred cEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeeccc
Q 002826 233 SILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQD 312 (876)
Q Consensus 233 ~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 312 (876)
++|+|++|+|+ .++. +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.|++..| +..+++|+.|+|++
T Consensus 112 ~~L~Ls~N~l~-~l~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 184 (605)
T 1m9s_A 112 KSLSLEHNGIS-DING--LVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSK 184 (605)
T ss_dssp CEEECTTSCCC-CCGG--GGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred CEEEecCCCCC-CCcc--ccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcC
Confidence 66666666655 3322 23355555555555555543 344555555555555555554443 44455555555555
Q ss_pred ccCCCCCCcccCCCCcccEEEecCCccc
Q 002826 313 NGFSGDFPDKLWSLPRIKLIRAESNRFS 340 (876)
Q Consensus 313 N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 340 (876)
|+|++. ..+..+++|+.|+|++|+++
T Consensus 185 N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 185 NHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp SCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred CCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 555432 23444444444444444444
No 357
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.81 E-value=1e-20 Score=200.59 Aligned_cols=127 Identities=13% Similarity=0.091 Sum_probs=102.9
Q ss_pred CCCCCCCceEEEEEEeCCCcEEEEEEEecCCcc------------------CHHHHHHHHHHHhhccCccccceeeEEEe
Q 002826 588 SAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQ------------------SSKTLKTEVKTLAKIRHKNIVKVLGFFHS 649 (876)
Q Consensus 588 ~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 649 (876)
...|.|+||.||+|...+|+.||+|++...... ....+.+|++++++++ | +++.+++..
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~ 172 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW 172 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec
Confidence 444445599999998888999999998643211 2346889999999999 5 777776644
Q ss_pred CCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccch
Q 002826 650 DESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALD 729 (876)
Q Consensus 650 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla 729 (876)
+..|+||||++|++|.+ +.. .....++.|++.|++|||+. +|+||||||+||+++ ++.+||+|||++
T Consensus 173 -~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DFG~a 239 (282)
T 1zar_A 173 -EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDFPQS 239 (282)
T ss_dssp -ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCCTTC
T ss_pred -cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEECCCC
Confidence 45699999999999988 422 22457999999999999999 999999999999999 999999999998
Q ss_pred h
Q 002826 730 R 730 (876)
Q Consensus 730 ~ 730 (876)
+
T Consensus 240 ~ 240 (282)
T 1zar_A 240 V 240 (282)
T ss_dssp E
T ss_pred e
Confidence 6
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=8.8e-20 Score=213.46 Aligned_cols=200 Identities=24% Similarity=0.325 Sum_probs=142.5
Q ss_pred CCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCccc
Q 002826 98 LSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVF 177 (876)
Q Consensus 98 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 177 (876)
+..+..++|+.+.+....+ +..|++|+.|+|++|.| +. +| .|..+++|+.|+|++|+|++..| +
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i----------~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l 83 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDI----------KS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--L 83 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCC----------CC-CT-TGGGCTTCCEEECTTSCCCCCGG--G
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCC----------CC-Ch-HHccCCCCCEEEeeCCCCCCChh--h
Confidence 3445566777777766544 56677777776655544 32 22 47778888888888888876555 7
Q ss_pred cCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccc
Q 002826 178 GNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKL 257 (876)
Q Consensus 178 ~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L 257 (876)
..+++|+.|+|++|+ +..+| .+..+++|+.|+|++|+++++ ..+..+++|+.|+|++|+|+ .+ . .+..+++|
T Consensus 84 ~~l~~L~~L~Ls~N~--l~~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~-~l-~-~l~~l~~L 155 (605)
T 1m9s_A 84 TNLKNLGWLFLDENK--IKDLS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKIT-DI-T-VLSRLTKL 155 (605)
T ss_dssp GGCTTCCEEECCSSC--CCCCT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCC-CC-G-GGGSCTTC
T ss_pred ccCCCCCEEECcCCC--CCCCh-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccC-Cc-h-hhcccCCC
Confidence 788888888888887 44444 677888888888888888764 45778888888888888887 34 2 23457888
Q ss_pred cEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCC
Q 002826 258 VSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWS 325 (876)
Q Consensus 258 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 325 (876)
+.|+|++|+|++..| +..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++++.....+..
T Consensus 156 ~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~ 219 (605)
T 1m9s_A 156 DTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSN 219 (605)
T ss_dssp SEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSS
T ss_pred CEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCccccccc
Confidence 888888888886655 77888888888888888764 35777888888888888887554443333
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=2.7e-20 Score=198.77 Aligned_cols=170 Identities=23% Similarity=0.299 Sum_probs=80.2
Q ss_pred cccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEE
Q 002826 254 LLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIR 333 (876)
Q Consensus 254 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 333 (876)
+++|++|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|++|++++|++++ +| .+..+++|+.|+
T Consensus 45 l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred cCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 44444444444444422 1 23444444444444444443322 4444444444444444442 11 244444444444
Q ss_pred ecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCcccc
Q 002826 334 AESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISG 413 (876)
Q Consensus 334 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~ 413 (876)
+++|++++. ..+..+++|+.|++++|+++ +. ..+..+++|+.|+|++|++++
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~------------------------~~--~~l~~l~~L~~L~L~~N~l~~ 170 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKIT------------------------DI--TVLSRLTKLDTLSLEDNQISD 170 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCC------------------------CC--GGGGGCTTCSEEECCSSCCCC
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCC------------------------cc--hhhccCCCCCEEEccCCcccc
Confidence 444444432 23444444444444444444 32 234444445555555555554
Q ss_pred CCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccc
Q 002826 414 QIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTG 460 (876)
Q Consensus 414 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 460 (876)
.++ +..+++|++|+|++|++++. | .+..+++|+.|++++|+++.
T Consensus 171 ~~~-l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 171 IVP-LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CGG-GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred chh-hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 443 55555666666666666532 2 25666666666666666653
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=2.9e-19 Score=182.43 Aligned_cols=154 Identities=16% Similarity=0.183 Sum_probs=85.9
Q ss_pred cEEecccCccCCCCCCccccccccccEEEeccccccCcCC-cccccCCccceeeeecccccccCCCCCccccccceeecc
Q 002826 233 SILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFP-NGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQ 311 (876)
Q Consensus 233 ~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 311 (876)
+.+++++|.++ .+|..++ ..+++|+|++|+|++..+ ..|..+++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 14 ~~l~~s~n~l~-~iP~~~~---~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP---QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEeEeCCCCcc-cCccCCC---CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 46777777776 5666543 245666666666665533 335556666666666666655555555555555555555
Q ss_pred cccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCC
Q 002826 312 DNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSL 391 (876)
Q Consensus 312 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 391 (876)
+|++++..+..|.++++|++| +|++|+|++..|..|.++++|+.|+|++|++++..
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L------------------------~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 145 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTL------------------------MLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVA 145 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEE------------------------ECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBC
T ss_pred CCccCccCHhHhcCCcCCCEE------------------------ECCCCcCCeECHhHcCCCccCCEEECCCCcCCEEC
Confidence 555554444444444444444 44444444444444555555555555555555555
Q ss_pred CCCcCCCCCccEEEccCCccccC
Q 002826 392 PPNFCDSPVMSIINLSQNSISGQ 414 (876)
Q Consensus 392 ~~~~~~~~~L~~L~Ls~N~l~~~ 414 (876)
|..|..+++|+.|+|++|.+...
T Consensus 146 ~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 146 PGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TTTTTTCTTCCEEECCSCCEECS
T ss_pred HHHhcCCCCCCEEEecCcCCcCC
Confidence 55555555666666666666543
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=2.9e-19 Score=182.41 Aligned_cols=150 Identities=16% Similarity=0.228 Sum_probs=85.0
Q ss_pred cEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeeccc
Q 002826 233 SILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQD 312 (876)
Q Consensus 233 ~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 312 (876)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|+|+++.|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 46777777777 6776553 4667777777777665555666666666666666666666666666666666666666
Q ss_pred ccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCcc
Q 002826 313 NGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNS 386 (876)
Q Consensus 313 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 386 (876)
|+|+...+..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|++++|.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 163 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNP 163 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCC
Confidence 66654444445555555555555555554444444444444444444444443333334444444443333333
No 362
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=7.1e-20 Score=202.11 Aligned_cols=178 Identities=21% Similarity=0.187 Sum_probs=100.5
Q ss_pred cEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccc-cCCccceeeeecccccccCCCCCccccccceeecc
Q 002826 233 SILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGIC-KANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQ 311 (876)
Q Consensus 233 ~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 311 (876)
+++++++|+++ .+|..++ ..++.|+|++|+|++..+..|. .+++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 46677777776 6666543 3466667777766665555555 66666666666666666666666666666666666
Q ss_pred cccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCC
Q 002826 312 DNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSL 391 (876)
Q Consensus 312 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 391 (876)
+|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~------------------ 158 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKD------------------ 158 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC-------------------
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcC------------------
Confidence 66666555555555666666666666655555555555555555555555555322222210
Q ss_pred CCCcCCCCCccEEEccCCccccCCc-Ccccccc--cceEeccCCcCC
Q 002826 392 PPNFCDSPVMSIINLSQNSISGQIP-ELKKCRK--LVSLSLADNSLT 435 (876)
Q Consensus 392 ~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~--L~~L~Ls~N~l~ 435 (876)
+..+++|+.|||++|+|++.++ .+..++. |+.|+|++|.+.
T Consensus 159 ---~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 159 ---GNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp ------CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ---cccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 0234445555555555554443 3444444 355666666654
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=1.3e-19 Score=200.04 Aligned_cols=175 Identities=18% Similarity=0.171 Sum_probs=96.2
Q ss_pred EEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCcccc-CCCCCcEEecccCccCCCCCCccccccccccEEEec
Q 002826 185 VLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFV-GLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVS 263 (876)
Q Consensus 185 ~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~ 263 (876)
.+++++|+ +..+|..+. ..++.|+|++|+|+++.+..|. ++++|++|+|++|+|+ .++...+..+++|++|+|+
T Consensus 22 ~l~c~~~~--l~~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 22 ILSCSKQQ--LPNVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp EEECCSSC--CSSCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECC
T ss_pred EEEeCCCC--cCccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCC-ccChhhccCCCCCCEEECC
Confidence 44555544 344444332 2355555555555555555555 5666666666666665 4444434455666666666
Q ss_pred cccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCccc---CCCCcccEEEecCCccc
Q 002826 264 QNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKL---WSLPRIKLIRAESNRFS 340 (876)
Q Consensus 264 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~ 340 (876)
+|+|++..+..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 666655555555666666666666666665556666666666666666666664444434 34555666666666655
Q ss_pred ccCccccccCCC--CCeeeccCcccC
Q 002826 341 GAIPDSISMAAQ--LEQVQIDNNRFT 364 (876)
Q Consensus 341 ~~~~~~~~~l~~--L~~L~L~~N~l~ 364 (876)
+..+..+..++. ++.|+|++|.+.
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ccCHHHhhhccHhhcceEEecCCCcc
Confidence 544445554444 245555555554
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=4.6e-19 Score=180.91 Aligned_cols=151 Identities=21% Similarity=0.265 Sum_probs=103.5
Q ss_pred eeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCcc
Q 002826 307 RFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNS 386 (876)
Q Consensus 307 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 386 (876)
.+++++|.++ .+|..+. ++|+.|++++|+|++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4455555554 3333332 456666666666666666666666666666666666666666666666777777777777
Q ss_pred ccCCCCCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccc
Q 002826 387 FYGSLPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTG 460 (876)
Q Consensus 387 l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 460 (876)
|++..+..|.++++|+.|+|++|+|++..+ .|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 766666666777777777777777777665 67777888888888888887777778888888888888888764
No 365
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.79 E-value=4.9e-20 Score=193.59 Aligned_cols=171 Identities=18% Similarity=0.239 Sum_probs=127.3
Q ss_pred CccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcE
Q 002826 155 SLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSI 234 (876)
Q Consensus 155 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 234 (876)
.+.+++.+++++|.+++.. .+..+++|++|++++|. +..+| .+..+++|++|+|++|++++..+ +.++++|++
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~--i~~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSN--IQSLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSC--CCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCC--cccch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCE
Confidence 5667778888888887443 57778888888888886 55666 67778888888888888887654 788888888
Q ss_pred EecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeeccccc
Q 002826 235 LDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNG 314 (876)
Q Consensus 235 L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 314 (876)
|+|++|+++ .+|.... ++|++|+|++|+|++. ..+..+++|++|+|++|+|++. + .+..+++|+.|++++|+
T Consensus 90 L~L~~N~l~-~l~~~~~---~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~ 161 (263)
T 1xeu_A 90 LSVNRNRLK-NLNGIPS---ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNE 161 (263)
T ss_dssp EECCSSCCS-CCTTCCC---SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSC
T ss_pred EECCCCccC-CcCcccc---CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCc
Confidence 888888888 5655332 7888888888888753 3577788888888888888764 2 57777777888888877
Q ss_pred CCCCCCcccCCCCcccEEEecCCccccc
Q 002826 315 FSGDFPDKLWSLPRIKLIRAESNRFSGA 342 (876)
Q Consensus 315 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 342 (876)
+++. ..+..+++|+.|++++|++++.
T Consensus 162 i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 162 ITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred Ccch--HHhccCCCCCEEeCCCCcccCC
Confidence 7765 5677777777777777777655
No 366
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=6.7e-19 Score=179.68 Aligned_cols=114 Identities=17% Similarity=0.165 Sum_probs=49.8
Q ss_pred ccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCcccccc
Q 002826 226 FVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNL 305 (876)
Q Consensus 226 ~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 305 (876)
|.++++|++|+|++|+|+ .++...+..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+++.|..|..+++|
T Consensus 53 ~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 131 (220)
T 2v70_A 53 FKKLPQLRKINFSNNKIT-DIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSV 131 (220)
T ss_dssp GGGCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTC
T ss_pred hccCCCCCEEECCCCcCC-EECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccC
Confidence 344444444444444444 2332222334444444444444444334444444444444444444444444444444444
Q ss_pred ceeecccccCCCCCCcccCCCCcccEEEecCCccc
Q 002826 306 ERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFS 340 (876)
Q Consensus 306 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 340 (876)
++|+|++|+|++..|..|..+++|+.|++++|.+.
T Consensus 132 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 132 RLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp SEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 44444444444444444444444444444444443
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=1.3e-21 Score=227.68 Aligned_cols=106 Identities=21% Similarity=0.327 Sum_probs=58.1
Q ss_pred CcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecc
Q 002826 232 LSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQ 311 (876)
Q Consensus 232 L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 311 (876)
|+.|+|++|+|+ .+|. +..+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|++ +| .|..+++|+.|+|+
T Consensus 443 L~~L~Ls~n~l~-~lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 443 VRVLHLAHKDLT-VLCH--LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp CSEEECTTSCCS-SCCC--GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred ceEEEecCCCCC-CCcC--ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 555666666665 3454 234555666666666655 445555555555555555555554 33 45555555555555
Q ss_pred cccCCCCC-CcccCCCCcccEEEecCCcccccC
Q 002826 312 DNGFSGDF-PDKLWSLPRIKLIRAESNRFSGAI 343 (876)
Q Consensus 312 ~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~ 343 (876)
+|+|++.. |..+..+++|+.|+|++|++++.+
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 55555444 555555555555555555555443
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=1.5e-18 Score=178.29 Aligned_cols=156 Identities=13% Similarity=0.113 Sum_probs=118.1
Q ss_pred cceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCC
Q 002826 305 LERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQ 384 (876)
Q Consensus 305 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 384 (876)
.+.++.++++++ .+|..+. ++|++|++++|++++..|..|..+++|++|+|++|+|+...+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 344555555555 3343332 6667777777777776677777777777777777777755556677777888888888
Q ss_pred ccccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCC
Q 002826 385 NSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIP 463 (876)
Q Consensus 385 N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 463 (876)
|+|++..+..|..+++|+.|+|++|+|+..+..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.+..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 8887777777888888888888888888666688889999999999999998777889999999999999999886443
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=1.7e-21 Score=226.60 Aligned_cols=203 Identities=15% Similarity=0.118 Sum_probs=123.8
Q ss_pred cCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccc
Q 002826 227 VGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLE 306 (876)
Q Consensus 227 ~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 306 (876)
..+++|+.|+|++|+|+ .+|..+.. +++|+.|++++|......|. .+..+.+.+.+|..+..+++|+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~-l~~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L~ 412 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELES-CKELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTLK 412 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHH-HHHHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHH-HHHHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhcc
Confidence 34556666666666665 66665543 66666666655431100000 0011122334444555555555
Q ss_pred eee-cccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCc
Q 002826 307 RFQ-VQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQN 385 (876)
Q Consensus 307 ~L~-L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 385 (876)
.|+ ++.|.+ ..|+.+.+++|.++...+. .|+.|+|++|+|++ +|. ++++++|+.|+|++|
T Consensus 413 ~L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N 473 (567)
T 1dce_A 413 AVDPMRAAYL-----------DDLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHN 473 (567)
T ss_dssp HHCGGGHHHH-----------HHHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSS
T ss_pred cCcchhhccc-----------chhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCcc
Confidence 555 444433 2344455555555543322 36677777777764 454 777777777777777
Q ss_pred cccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCC-CcCCCCCCCcceeeCCCCcccccCC
Q 002826 386 SFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEI-PPSLAELPVLTYLDLSDNNLTGPIP 463 (876)
Q Consensus 386 ~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p 463 (876)
.|+ .+|..|+.+++|+.|+|++|+|++. |.++.+++|++|+|++|+|++.+ |..|+.+++|+.|+|++|+|++.+|
T Consensus 474 ~l~-~lp~~~~~l~~L~~L~Ls~N~l~~l-p~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 474 RLR-ALPPALAALRCLEVLQASDNALENV-DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCC-CCCGGGGGCTTCCEEECCSSCCCCC-GGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred ccc-ccchhhhcCCCCCEEECCCCCCCCC-cccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 776 5666777777777777777777764 47777778888888888887766 7778888888888888888876554
No 370
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=8.5e-20 Score=198.85 Aligned_cols=218 Identities=13% Similarity=0.089 Sum_probs=131.7
Q ss_pred CCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeeccc----ccccCCCCCccccc
Q 002826 229 LQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNF----FNGSIPGSINECLN 304 (876)
Q Consensus 229 l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~----i~~~~~~~~~~l~~ 304 (876)
+++|+.|+|.+ +++ .|++..|.++++|+.|++++|.+..+.+.+|....++..+.+..+. .......+|.++.+
T Consensus 100 ~~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~ 177 (329)
T 3sb4_A 100 KQTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEP 177 (329)
T ss_dssp CTTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCC
T ss_pred cCCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccc
Confidence 55555555555 555 5555555555555555555555554555555555555544444321 22233445555555
Q ss_pred cc-eeecccccCCCCCCccc----CCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccE
Q 002826 305 LE-RFQVQDNGFSGDFPDKL----WSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYR 379 (876)
Q Consensus 305 L~-~L~L~~N~l~~~~p~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 379 (876)
|+ .+.+.... .++..+ ....+++.+.+.++-...........+++|+.|+|++|+++...+..|.++++|+.
T Consensus 178 L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~ 254 (329)
T 3sb4_A 178 LETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLK 254 (329)
T ss_dssp CEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCE
T ss_pred cceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCE
Confidence 55 33333211 111111 12345556666554322111111223677888888888887666667888888888
Q ss_pred EeCCCccccCCCCCCcCCCCCcc-EEEccCCccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeC
Q 002826 380 FSASQNSFYGSLPPNFCDSPVMS-IINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDL 453 (876)
Q Consensus 380 L~ls~N~l~~~~~~~~~~~~~L~-~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 453 (876)
+++.+| ++.+.+..|.++.+|+ .+++.+ +++.+.+ .|.++++|+.|++++|+++.+.+.+|.++++|+.++.
T Consensus 255 l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 255 IKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 888877 7767777888888888 888877 6665555 7888888888888888888777778888888887763
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=1.6e-19 Score=189.67 Aligned_cols=171 Identities=21% Similarity=0.330 Sum_probs=112.6
Q ss_pred CCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCcc
Q 002826 97 ELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFV 176 (876)
Q Consensus 97 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 176 (876)
.+.++..+++++|.+++.. .+..+++|++|++++|.| + .+| .+..+++|++|+|++|+|++..+
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i----------~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-- 80 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNI----------Q-SLA-GMQFFTNLKELHLSHNQISDLSP-- 80 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCC----------C-CCT-TGGGCTTCCEEECCSSCCCCCGG--
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCc----------c-cch-HHhhCCCCCEEECCCCccCCChh--
Confidence 3555667777777776643 567777777665555443 3 233 56777778888888887775544
Q ss_pred ccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCcccccccc
Q 002826 177 FGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLK 256 (876)
Q Consensus 177 ~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~ 256 (876)
|.++++|++|+|++|+ +..+|.... ++|++|+|++|++++. ..+..+++|++|+|++|+|+ .++ . +..+++
T Consensus 81 l~~l~~L~~L~L~~N~--l~~l~~~~~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~-~~~-~-l~~l~~ 151 (263)
T 1xeu_A 81 LKDLTKLEELSVNRNR--LKNLNGIPS--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLK-SIV-M-LGFLSK 151 (263)
T ss_dssp GTTCSSCCEEECCSSC--CSCCTTCCC--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCC-BCG-G-GGGCTT
T ss_pred hccCCCCCEEECCCCc--cCCcCcccc--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCC-CCh-H-HccCCC
Confidence 7777777788887776 455554322 6777777777777754 34677777777777777776 444 2 344677
Q ss_pred ccEEEeccccccCcCCcccccCCccceeeeeccccccc
Q 002826 257 LVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGS 294 (876)
Q Consensus 257 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 294 (876)
|++|+|++|++++. ..+..+++|+.|++++|.++..
T Consensus 152 L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 152 LEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 77777777777654 5566666777777777766644
No 372
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=1.2e-19 Score=197.55 Aligned_cols=292 Identities=15% Similarity=0.111 Sum_probs=149.5
Q ss_pred cccccccc--CCCCCCeeecCCCccccccCccccC-CCCCCcccCCCcccceeecCCccccccCCCccCCccccceeccc
Q 002826 89 GEISSSVC--ELSSLSNLNLADNLFNQPIPLHLSQ-CSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLG 165 (876)
Q Consensus 89 ~~~~~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~ 165 (876)
|.++..+. .+.+++.|.++++ +....-..+.. +++|++|||++|+|.... ..+. .++.++.+.+.
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~--------~~~~---~~~~~~~~~~~ 80 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYS--------GKAG---TYPNGKFYIYM 80 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEE--------ESSS---SSGGGCCEEEC
T ss_pred CcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEec--------Cccc---ccccccccccc
Confidence 44444444 3677888888764 22222223333 677777766666654111 1111 11223444444
Q ss_pred ccccCCCcCccccC--------CCcceEEEccCCCCcCCCCCC-cccccCcccEEEecCCCCcccCCccccCCCCCcEEe
Q 002826 166 SNLLSGSVPFVFGN--------FSELVVLDLSQNAYLISEIPS-DIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILD 236 (876)
Q Consensus 166 ~N~l~~~~p~~~~~--------l~~L~~L~Ls~N~~~~~~~p~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 236 (876)
.|. +.+.+|.+ +++|+.|+|.+ . +..++. .|.++++|+.|++.+|.+..+.+.+|.++.++..+.
T Consensus 81 ~~~---I~~~aF~~~~~~~~~g~~~L~~l~L~~-~--i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~ 154 (329)
T 3sb4_A 81 ANF---VPAYAFSNVVNGVTKGKQTLEKVILSE-K--IKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIP 154 (329)
T ss_dssp TTE---ECTTTTEEEETTEEEECTTCCC-CBCT-T--CCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEEC
T ss_pred ccc---cCHHHhcccccccccccCCCcEEECCc-c--ccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEec
Confidence 442 23345555 66677777666 3 444543 366667777777777766666667777766666666
Q ss_pred cccCc----cCCCCCCcccccccccc-EEEeccccccCcCCccc----ccCCccceeeeecccccccCCCCC-ccccccc
Q 002826 237 LSQNN----LTGEVPQSLGSSLLKLV-SFDVSQNKLSGSFPNGI----CKANGLVNLSLHKNFFNGSIPGSI-NECLNLE 306 (876)
Q Consensus 237 Ls~N~----l~~~ip~~~~~~l~~L~-~L~L~~N~l~~~~~~~~----~~l~~L~~L~L~~N~i~~~~~~~~-~~l~~L~ 306 (876)
+..+. .. .+....|.++..|+ .+++.... .++..+ ....++..+.+.++-.. .....+ ..+++|+
T Consensus 155 ~~~~~~~~~~~-~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~ 229 (329)
T 3sb4_A 155 LGSSDAYRFKN-RWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLV 229 (329)
T ss_dssp TTCTHHHHTST-TTTTSCEEESCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCC
T ss_pred Ccchhhhhccc-cccccccccccccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCe
Confidence 65532 22 23333444455555 33333221 111111 12334444444443211 000011 1245555
Q ss_pred eeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCC-eeeccCcccCCCCCCccccccCccEEeCCCc
Q 002826 307 RFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLE-QVQIDNNRFTSSIPQGLGSVKSLYRFSASQN 385 (876)
Q Consensus 307 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 385 (876)
.++|++|+++.+.+.+|.++++|+.+++.+| ++.+.+.+|.++.+|+ .+++.+ .++...+..|.++++|+.+++++|
T Consensus 230 ~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n 307 (329)
T 3sb4_A 230 SLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGD 307 (329)
T ss_dssp EEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSS
T ss_pred EEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCC
Confidence 5555555555555555555556666666555 5555555566666666 666655 455444556666666666666666
Q ss_pred cccCCCCCCcCCCCCccEEE
Q 002826 386 SFYGSLPPNFCDSPVMSIIN 405 (876)
Q Consensus 386 ~l~~~~~~~~~~~~~L~~L~ 405 (876)
+++.+.+..|.++++|+.++
T Consensus 308 ~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 308 KITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CCCEECTTTTCTTCCCCEEE
T ss_pred ccCccchhhhcCCcchhhhc
Confidence 66666666666666666654
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=1.6e-19 Score=216.77 Aligned_cols=196 Identities=18% Similarity=0.170 Sum_probs=103.1
Q ss_pred cccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEe
Q 002826 157 VNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILD 236 (876)
Q Consensus 157 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 236 (876)
+.++.|+|.+|.+... +. ..|+.++|+.|. +..+++..|++. ..++.|..+++|+.|+
T Consensus 173 ~~~~~l~L~~n~~~~~-~~-----~~l~~l~Ls~~~---------------i~~~~~~~n~~~-~~~~~~~~l~~L~~L~ 230 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQ-----ALLQHKKLSQYS---------------IDEDDDIENRMV-MPKDSKYDDQLWHALD 230 (727)
T ss_dssp -----------------------------------------------------------------------CCCCCCEEE
T ss_pred CccceEEeeCCCCCcc-hh-----hHhhcCccCccc---------------ccCcccccccee-cChhhhccCCCCcEEE
Confidence 3455666666666532 21 224445555553 223344445554 4566777777777777
Q ss_pred cccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCC
Q 002826 237 LSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFS 316 (876)
Q Consensus 237 Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 316 (876)
|++|+|. .+|..++ .+++|++|+|++|+|+ .+|..|.++++|++|+|++|+|+ .+|..|..+++|++|+|++|.|+
T Consensus 231 Ls~n~l~-~l~~~~~-~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 306 (727)
T 4b8c_D 231 LSNLQIF-NISANIF-KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT 306 (727)
T ss_dssp CTTSCCS-CCCGGGG-GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC
T ss_pred CCCCCCC-CCChhhc-CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC
Confidence 7777777 7777666 4777777777777777 66777777777888888888777 56777778888888888888776
Q ss_pred CCCCcccCCCCcccEEEecCCcccccCccccccCCC-CCeeeccCcccCCCCCCccccccCccEEeCCCc
Q 002826 317 GDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQ-LEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQN 385 (876)
Q Consensus 317 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 385 (876)
.+|..|..+++|+.|+|++|+|++.+|..+..+.. +..++|++|.+++.+|..+ ..|++++|
T Consensus 307 -~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l------~~l~l~~n 369 (727)
T 4b8c_D 307 -TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER------RFIEINTD 369 (727)
T ss_dssp -CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred -ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccc------ceeEeecc
Confidence 56666888888888888888888777777655422 2346788888887777543 34455555
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=4.1e-18 Score=169.94 Aligned_cols=179 Identities=18% Similarity=0.256 Sum_probs=117.3
Q ss_pred cEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCC-ccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccC
Q 002826 330 KLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQ-GLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQ 408 (876)
Q Consensus 330 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~ 408 (876)
+.+++++|+++ .+|..+. .+|++|++++|++++..+. .|..+++|++|++++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 44555555554 2333332 2677777777777755554 367777788888888888777778888888888888888
Q ss_pred CccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCc-ccccccceEEccCCccccccC
Q 002826 409 NSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQG-LQNLKLALFNVSFNKLSGRVP 486 (876)
Q Consensus 409 N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~l~~l~ls~N~l~~~~p 486 (876)
|+|++.++ .|.++++|++|+|++|+|++.+|..|..+++|++|+|++|++++..+-. +.. .+....+..+......|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~-~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE-WLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHH-HHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHH-HHHHcCCCCCCCCCCCC
Confidence 88888777 5888888999999999999888889999999999999999998755421 111 11112333444444444
Q ss_pred CcccCCCCCccccCCCCCCCCCCCCCC
Q 002826 487 YSLISGLPASYLQGNPGLCGPGLSNSC 513 (876)
Q Consensus 487 ~~~~~~~~~~~~~~N~~~C~~~~~~~c 513 (876)
.. +.+.....+..+...|..+.+..|
T Consensus 167 ~~-l~~~~l~~l~~~~~~C~~~~~~~c 192 (192)
T 1w8a_A 167 SK-VRDVQIKDLPHSEFKCSSENSEGC 192 (192)
T ss_dssp TT-TTTSBGGGSCTTTCCCCCC---CC
T ss_pred hH-HcCCChhhCcHhhcCcCCCCCCCC
Confidence 33 233444456666666765544333
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=3.9e-18 Score=170.92 Aligned_cols=153 Identities=19% Similarity=0.246 Sum_probs=84.0
Q ss_pred ccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCe
Q 002826 276 CKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQ 355 (876)
Q Consensus 276 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 355 (876)
..+++|+.|++++|.|+ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~----------------- 99 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKD----------------- 99 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTT-----------------
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCc-----------------
Confidence 45566666666666665 233 45555555555555554431 1234444444444444444
Q ss_pred eeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCc-cccCCcCcccccccceEeccCCcC
Q 002826 356 VQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNS-ISGQIPELKKCRKLVSLSLADNSL 434 (876)
Q Consensus 356 L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~-l~~~~~~~~~l~~L~~L~Ls~N~l 434 (876)
+++..|..+..+++|+.|++++|++++..|..+..+++|++|++++|. ++ .++.+..+++|++|++++|++
T Consensus 100 -------l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 100 -------VTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIMPLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp -------CBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCGGGGGCSSCCEEECTTBCC
T ss_pred -------cCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccHhhcCCCCCCEEECCCCCC
Confidence 444444444445555555555555554444555555555666666665 33 334566677777777777777
Q ss_pred CCCCCcCCCCCCCcceeeCCCCccc
Q 002826 435 TGEIPPSLAELPVLTYLDLSDNNLT 459 (876)
Q Consensus 435 ~~~~p~~~~~l~~L~~L~Ls~N~l~ 459 (876)
++. + .+..+++|+.|++++|++.
T Consensus 172 ~~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 172 HDY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCC-T-TGGGCSSCCEEEECBC---
T ss_pred cCh-H-HhccCCCCCEEEeeCcccC
Confidence 643 3 5667777777777777765
No 376
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=1.1e-17 Score=167.70 Aligned_cols=152 Identities=16% Similarity=0.233 Sum_probs=121.0
Q ss_pred cccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccE
Q 002826 252 SSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKL 331 (876)
Q Consensus 252 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 331 (876)
..+++|++|++++|+++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45899999999999999 555 69999999999999997763 347899999999999999999888999999999999
Q ss_pred EEecCCcccccCccccccCCCCCeeeccCcc-cCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCc
Q 002826 332 IRAESNRFSGAIPDSISMAAQLEQVQIDNNR-FTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNS 410 (876)
Q Consensus 332 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~ 410 (876)
|++++|++++..+..+..+++|++|++++|+ ++ .+| .+..+++|+.|++++|++++.. .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcc
Confidence 9999999998888889999999999999998 55 444 5666777777766666665422 34444444555544444
Q ss_pred c
Q 002826 411 I 411 (876)
Q Consensus 411 l 411 (876)
+
T Consensus 193 i 193 (197)
T 4ezg_A 193 I 193 (197)
T ss_dssp -
T ss_pred c
Confidence 4
No 377
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.72 E-value=1.7e-16 Score=176.46 Aligned_cols=240 Identities=13% Similarity=0.146 Sum_probs=112.6
Q ss_pred cccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeee
Q 002826 207 KLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSL 286 (876)
Q Consensus 207 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 286 (876)
+|+.+.+.+| ++.+...+|.+. +|+.+.+.. .++ .++...|.++++|+.++|++|+++.+...+|. ..+|+.+.|
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~l 210 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLL 210 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEEC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEe
Confidence 4455554433 444444445442 355555543 444 44444444555555555555555543334443 345555555
Q ss_pred ecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccC--
Q 002826 287 HKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFT-- 364 (876)
Q Consensus 287 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-- 364 (876)
..| ++.+...+|.++++|+.+.+.+| ++.+...+|.+ .+|+.+.+ .|.++.+...+|.++.+|+.+++.+|.+.
T Consensus 211 p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~ 286 (401)
T 4fdw_A 211 PVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDD 286 (401)
T ss_dssp CTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCC
T ss_pred CCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCC
Confidence 432 44445555555555555555543 33344444444 45555555 33344455555555555555555555443
Q ss_pred ---CCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCcCcccccccceEeccCCcCCCCCCcC
Q 002826 365 ---SSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIPELKKCRKLVSLSLADNSLTGEIPPS 441 (876)
Q Consensus 365 ---~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 441 (876)
...+..|.++++|+.+.+. |.++.+.... |.++++|+.++|..| ++.+.+.+
T Consensus 287 ~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~a-----------------------F~~c~~L~~l~lp~~-l~~I~~~a 341 (401)
T 4fdw_A 287 PEAMIHPYCLEGCPKLARFEIP-ESIRILGQGL-----------------------LGGNRKVTQLTIPAN-VTQINFSA 341 (401)
T ss_dssp TTCEECTTTTTTCTTCCEECCC-TTCCEECTTT-----------------------TTTCCSCCEEEECTT-CCEECTTS
T ss_pred cccEECHHHhhCCccCCeEEeC-CceEEEhhhh-----------------------hcCCCCccEEEECcc-ccEEcHHh
Confidence 1223334444444444444 2233333344 444555555555332 44344445
Q ss_pred CCCCCCcceeeCCCCcccccCCCccccc--ccceEEccCCcc
Q 002826 442 LAELPVLTYLDLSDNNLTGPIPQGLQNL--KLALFNVSFNKL 481 (876)
Q Consensus 442 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~l~~l~ls~N~l 481 (876)
|.++ +|+.|++++|.+....+..|..+ .+..+++..|.+
T Consensus 342 F~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 342 FNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp SSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred CCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 5555 55555555555443333334433 234444444433
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=3.5e-17 Score=163.17 Aligned_cols=112 Identities=16% Similarity=0.278 Sum_probs=52.8
Q ss_pred ccceeecccccCCCCCCc-ccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeC
Q 002826 304 NLERFQVQDNGFSGDFPD-KLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSA 382 (876)
Q Consensus 304 ~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 382 (876)
+|++|++++|+|++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|.++++|+.|++
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 333444444444333332 2334444444444444444444444444444444444444444444444444555555555
Q ss_pred CCccccCCCCCCcCCCCCccEEEccCCccccCC
Q 002826 383 SQNSFYGSLPPNFCDSPVMSIINLSQNSISGQI 415 (876)
Q Consensus 383 s~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~ 415 (876)
++|++++..|..|..+++|++|+|++|.+++..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 555555555555555555555555555555443
No 379
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.69 E-value=4.1e-16 Score=173.43 Aligned_cols=270 Identities=12% Similarity=0.131 Sum_probs=132.8
Q ss_pred CCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCcccc
Q 002826 99 SSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFG 178 (876)
Q Consensus 99 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 178 (876)
..++.+.+.+ .++.+...+|.++ +|+.+.|.+| ++.+-..+|.+ .+|+.+.|.+ .++.+.+.+|.
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-----------i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~ 177 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-----------LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFY 177 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-----------CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTT
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-----------ccEECHHhcCC-CCceEEEeCC-CccEehHHHhh
Confidence 4444554432 3444445555553 4555544332 23333344444 2466666654 45545555666
Q ss_pred CCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCcccccccccc
Q 002826 179 NFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLV 258 (876)
Q Consensus 179 ~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~ 258 (876)
++++|+.++|++|+ +..+|.......+|+.+.|.+ .+..+...+|.++++|+.+++..| ++ .++...|.+ .+|+
T Consensus 178 ~c~~L~~l~l~~n~--l~~I~~~aF~~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~-~~L~ 251 (401)
T 4fdw_A 178 YCYNLKKADLSKTK--ITKLPASTFVYAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRE-SGIT 251 (401)
T ss_dssp TCTTCCEEECTTSC--CSEECTTTTTTCCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTT-CCCS
T ss_pred CcccCCeeecCCCc--ceEechhhEeecccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-cc-Ccccccccc-CCcc
Confidence 66666666666554 444544422245555555552 255555555555555555555543 44 455555543 4555
Q ss_pred EEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCc
Q 002826 259 SFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNR 338 (876)
Q Consensus 259 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 338 (876)
.+++ .|.++.+...+|.++++|+.+++.+|.+.. +.+..+.+.+|.++++|+.+++. |.
T Consensus 252 ~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~-------------------~~~~~I~~~aF~~c~~L~~l~l~-~~ 310 (401)
T 4fdw_A 252 TVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFND-------------------DPEAMIHPYCLEGCPKLARFEIP-ES 310 (401)
T ss_dssp EEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCC-------------------CTTCEECTTTTTTCTTCCEECCC-TT
T ss_pred EEEe-CCCccEEChhHhhCCCCCCEEEeCCccccC-------------------CcccEECHHHhhCCccCCeEEeC-Cc
Confidence 5555 333444444555555555555555544430 00002333444444555555554 23
Q ss_pred ccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCC-CccEEEccCCccc
Q 002826 339 FSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSP-VMSIINLSQNSIS 412 (876)
Q Consensus 339 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~-~L~~L~Ls~N~l~ 412 (876)
++.+...+|.++.+|+.+.|.+| ++...+..|.++ +|+.+++++|.+....+..|.+++ .++.|++..+.+.
T Consensus 311 i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 311 IRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred eEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 44444445555555555555333 443444455555 555555555555545555555553 5566666665543
No 380
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.68 E-value=1.2e-17 Score=174.92 Aligned_cols=135 Identities=16% Similarity=0.119 Sum_probs=101.6
Q ss_pred ccCCCCCCCCceEEEEEEe-CCCcE--EEEEEEecCCccC------------------------HHHHHHHHHHHhhccC
Q 002826 585 EKSSAGNGGPFGRVYILSL-PSGEL--IAVKKLVNFGCQS------------------------SKTLKTEVKTLAKIRH 637 (876)
Q Consensus 585 ~~~~~g~~g~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~------------------------~~~~~~E~~~l~~l~h 637 (876)
++....|.|+||.||+|.. .+|+. ||||++....... ...+.+|+..+++++|
T Consensus 50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 129 (258)
T 1zth_A 50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE 129 (258)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence 3344445555999999977 68999 9999875431110 1257889999999998
Q ss_pred ccc--cceeeEEEeCCeEEEEEEcCCC-C----CHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhh-ccCCCCccccccc
Q 002826 638 KNI--VKVLGFFHSDESIFLIYEFLQM-G----SLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLH-KDYVPHLLHRNVK 709 (876)
Q Consensus 638 ~ni--v~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~i~H~Dlk 709 (876)
+++ +.++++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.||| +. +|+|||||
T Consensus 130 ~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlk 198 (258)
T 1zth_A 130 AGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEA---ELVHADLS 198 (258)
T ss_dssp TTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCS
T ss_pred CCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCC
Confidence 864 333332 356899999942 3 67766432 234567889999999999999 88 99999999
Q ss_pred cCceeeCCCCCeEEccccchhhc
Q 002826 710 SKNILLDADFEPKLTDFALDRIV 732 (876)
Q Consensus 710 p~NIll~~~~~~kl~DfGla~~~ 732 (876)
|+|||++. .++|+|||+|...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999998654
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.1e-16 Score=155.91 Aligned_cols=136 Identities=25% Similarity=0.273 Sum_probs=85.9
Q ss_pred CCCCCeeecCCCccc-cccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCcc
Q 002826 98 LSSLSNLNLADNLFN-QPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFV 176 (876)
Q Consensus 98 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 176 (876)
.++|++|+|++|.++ +.+|..+..+++|++|+|++| .+++. ..|..+++|++|+|++|++++.+|..
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n----------~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~ 90 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINV----------GLISV--SNLPKLPKLKKLELSENRIFGGLDML 90 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESS----------CCCCC--SSCCCCSSCCEEEEESCCCCSCCCHH
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCC----------CCCCh--hhhccCCCCCEEECcCCcCchHHHHH
Confidence 466777777777776 556666677777766644444 33333 55666777777777777777656666
Q ss_pred ccCCCcceEEEccCCCCcCCCCC--CcccccCcccEEEecCCCCcccCC---ccccCCCCCcEEecccCccCCCCCC
Q 002826 177 FGNFSELVVLDLSQNAYLISEIP--SDIGKLEKLEQLFLQSSGFHGVIP---DSFVGLQSLSILDLSQNNLTGEVPQ 248 (876)
Q Consensus 177 ~~~l~~L~~L~Ls~N~~~~~~~p--~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~ip~ 248 (876)
+.++++|++|+|++|+ +..+| ..+..+++|++|++++|.+++..+ ..|..+++|++|++++|.++ ++|.
T Consensus 91 ~~~l~~L~~L~Ls~N~--l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 91 AEKLPNLTHLNLSGNK--LKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp HHHCTTCCEEECBSSS--CCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred HhhCCCCCEEeccCCc--cCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 6667777777777776 44444 456666666666666666665544 35666666666666666665 4444
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.3e-16 Score=155.41 Aligned_cols=131 Identities=25% Similarity=0.269 Sum_probs=75.8
Q ss_pred CcccEEEecCCccc-ccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEE
Q 002826 327 PRIKLIRAESNRFS-GAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIIN 405 (876)
Q Consensus 327 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ 405 (876)
++|+.|++++|+++ +.+|..+..+++|++|++++|++++. ..+..+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34445555555544 34444445555555555555555533 4455555555555555555554555555556666666
Q ss_pred ccCCccccCC--cCcccccccceEeccCCcCCCCCC---cCCCCCCCcceeeCCCCccc
Q 002826 406 LSQNSISGQI--PELKKCRKLVSLSLADNSLTGEIP---PSLAELPVLTYLDLSDNNLT 459 (876)
Q Consensus 406 Ls~N~l~~~~--~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 459 (876)
|++|++++.+ +.+..+++|++|+|++|++++..+ ..|..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 6666666543 356666777777777777765444 46677777777777777665
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=8.5e-16 Score=153.04 Aligned_cols=127 Identities=15% Similarity=0.202 Sum_probs=88.2
Q ss_pred cEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeeccc
Q 002826 233 SILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQD 312 (876)
Q Consensus 233 ~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 312 (876)
+++++++|+++ .+|..++ ++|++|+|++|+|+ .+|..|..+++|++|+|++|.|+++.+..|.++++|++|+|++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP---RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCCC-cCCCCCC---CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 56777777777 6776553 46777777777776 5566777777777777777777766666777777777777777
Q ss_pred ccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccC
Q 002826 313 NGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFT 364 (876)
Q Consensus 313 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 364 (876)
|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 7777666666666777777777777666655556666666666666666665
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=1.6e-15 Score=149.05 Aligned_cols=131 Identities=17% Similarity=0.204 Sum_probs=75.5
Q ss_pred CcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecc
Q 002826 232 LSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQ 311 (876)
Q Consensus 232 L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 311 (876)
.+.+++++|+++ .+|..++ ++|++|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCCc-cCCCCCC---CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 345666666665 5554432 455666666666665555555556666666666666665555555666666666666
Q ss_pred cccCCCCCCcccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCC
Q 002826 312 DNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSS 366 (876)
Q Consensus 312 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 366 (876)
+|+|++..+..|..+++|++|++++|++++..+..+..+++|++|++++|.+++.
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 6666655555555566666666666666555554555555666666666655543
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.8e-15 Score=150.60 Aligned_cols=123 Identities=28% Similarity=0.463 Sum_probs=53.1
Q ss_pred eecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCC-CcccccCcccEEEecCC
Q 002826 138 LDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIP-SDIGKLEKLEQLFLQSS 216 (876)
Q Consensus 138 LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p-~~~~~l~~L~~L~L~~n 216 (876)
+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+ +..++ ..|.++++|++|+|++|
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~--i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNR--ISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSC--CCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCc--CCEeCHhHccCCCCCCEEECCCC
Confidence 344444444 3343332 34555555555554 344445555555555555554 22222 22444444444444444
Q ss_pred CCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccc
Q 002826 217 GFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKL 267 (876)
Q Consensus 217 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l 267 (876)
+|+++.|..|.++++|++|+|++|+|+ .+|...+..+++|++|+|++|.+
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCe
Confidence 444444444444444444444444444 33333333334444444444433
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=2.4e-15 Score=147.66 Aligned_cols=128 Identities=22% Similarity=0.305 Sum_probs=62.9
Q ss_pred eEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEec
Q 002826 184 VVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVS 263 (876)
Q Consensus 184 ~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~ 263 (876)
+.+++++|+ +..+|..+. ++|++|++++|+++++.+..|.++++|++|+|++|+|+ .+|...+..+++|++|+|+
T Consensus 10 ~~l~~~~~~--l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 10 TEIRCNSKG--LTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TEEECCSSC--CSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred CEEEecCCC--CccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce-EeChhHccCCCccCEEECC
Confidence 344444444 334443322 34555555555555544445555555555555555555 4444433445555555555
Q ss_pred cccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCC
Q 002826 264 QNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFS 316 (876)
Q Consensus 264 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 316 (876)
+|+|++..+..+..+++|++|+|++|.|++..+..|..+++|++|++++|.++
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 55555444444444555555555555554444444444444444444444444
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=4.6e-16 Score=148.16 Aligned_cols=127 Identities=25% Similarity=0.267 Sum_probs=79.8
Q ss_pred CCCCCeeecCCCccc-cccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCcc
Q 002826 98 LSSLSNLNLADNLFN-QPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFV 176 (876)
Q Consensus 98 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 176 (876)
.++|+.|++++|.++ +.+|..++.+++|++|+|++|. +++. ..++.+++|++|+|++|++++.+|..
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~----------l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~ 83 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVG----------LTSI--ANLPKLNKLKKLELSDNRVSGGLEVL 83 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSC----------CCCC--TTCCCCTTCCEEECCSSCCCSCTHHH
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCC----------CCCc--hhhhcCCCCCEEECCCCcccchHHHH
Confidence 356777777777777 5667777777777766554443 3333 55666777777777777777656666
Q ss_pred ccCCCcceEEEccCCCCcCCCCC--CcccccCcccEEEecCCCCcccCC---ccccCCCCCcEEecc
Q 002826 177 FGNFSELVVLDLSQNAYLISEIP--SDIGKLEKLEQLFLQSSGFHGVIP---DSFVGLQSLSILDLS 238 (876)
Q Consensus 177 ~~~l~~L~~L~Ls~N~~~~~~~p--~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~Ls 238 (876)
+.++++|++|++++|+ +..+| ..+..+++|++|++++|++++..+ ..+..+++|++|+++
T Consensus 84 ~~~l~~L~~L~ls~N~--i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 84 AEKCPNLTHLNLSGNK--IKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp HHHCTTCCEEECTTSC--CCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred hhhCCCCCEEECCCCc--CCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 6667777777777776 33332 455556666666666666655444 345555666665554
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=3.6e-16 Score=148.87 Aligned_cols=124 Identities=28% Similarity=0.286 Sum_probs=57.2
Q ss_pred ccEEEecCCccc-ccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEcc
Q 002826 329 IKLIRAESNRFS-GAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLS 407 (876)
Q Consensus 329 L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls 407 (876)
|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..+.++++|+.|++++|.+++.+|..+..+++|++|+++
T Consensus 19 l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls 96 (149)
T 2je0_A 19 VKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLS 96 (149)
T ss_dssp CSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECT
T ss_pred CeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECC
Confidence 334444444433 33333334444444444444444432 334444444444444444444344444444445555555
Q ss_pred CCccccCC--cCcccccccceEeccCCcCCCCCC---cCCCCCCCcceeeCC
Q 002826 408 QNSISGQI--PELKKCRKLVSLSLADNSLTGEIP---PSLAELPVLTYLDLS 454 (876)
Q Consensus 408 ~N~l~~~~--~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls 454 (876)
+|++++.+ ..+..+++|++|++++|++++..+ ..+..+++|+.||++
T Consensus 97 ~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 97 GNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 55554432 345555555555555555554443 345555555555554
No 389
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.60 E-value=2e-14 Score=160.45 Aligned_cols=309 Identities=13% Similarity=0.115 Sum_probs=142.8
Q ss_pred cccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCc
Q 002826 94 SVCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSV 173 (876)
Q Consensus 94 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 173 (876)
+|.++++|+.+.|.. .++.+...+|.++++|+.++|.++ ++..-...|.++++|+.+.+..+ ++.+.
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-----------l~~I~~~aF~~c~~L~~i~~p~~-l~~i~ 132 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-----------VKMIGRCTFSGCYALKSILLPLM-LKSIG 132 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-----------CCEECTTTTTTCTTCCCCCCCTT-CCEEC
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-----------ceEccchhhcccccchhhcccCc-eeeec
Confidence 455566666666653 355555556666666666655432 22223345555666666555443 33344
Q ss_pred CccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccc
Q 002826 174 PFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSS 253 (876)
Q Consensus 174 p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~ 253 (876)
..+|.+...+......... ..-...|.++++|+.+.+.++ +..+....|.++.+|+.+++..| ++ .++...|.+
T Consensus 133 ~~aF~~~~~~~~~~~~~~~---~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~-~I~~~~F~~ 206 (394)
T 4fs7_A 133 VEAFKGCDFKEITIPEGVT---VIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LK-IIRDYCFAE 206 (394)
T ss_dssp TTTTTTCCCSEEECCTTCC---EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CC-EECTTTTTT
T ss_pred ceeeecccccccccCcccc---ccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ce-EeCchhhcc
Confidence 4555555433333322221 111123555555555555433 22344455555555555555544 33 444444555
Q ss_pred cccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEE
Q 002826 254 LLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIR 333 (876)
Q Consensus 254 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 333 (876)
+..|+.+.+..+... +.+.+....+|+.+.+..+ ++.+...+|.++.+|+.+.+..+..+ .....|.....++.+.
T Consensus 207 ~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~ 282 (394)
T 4fs7_A 207 CILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVI 282 (394)
T ss_dssp CTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEE
T ss_pred ccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceec
Confidence 555555554444322 1222223344444444332 22233444555555555555444322 3334444444444444
Q ss_pred ecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCcccc
Q 002826 334 AESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISG 413 (876)
Q Consensus 334 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~ 413 (876)
...+.+ ....|..+.+|+.+.+.++ ++.+....|.++.+|+.++|..+ ++.
T Consensus 283 ~~~~~i---~~~~F~~~~~L~~i~l~~~-------------------------i~~I~~~aF~~c~~L~~i~lp~~-v~~ 333 (394)
T 4fs7_A 283 YGSVIV---PEKTFYGCSSLTEVKLLDS-------------------------VKFIGEEAFESCTSLVSIDLPYL-VEE 333 (394)
T ss_dssp ECSSEE---CTTTTTTCTTCCEEEECTT-------------------------CCEECTTTTTTCTTCCEECCCTT-CCE
T ss_pred cCceee---ccccccccccccccccccc-------------------------cceechhhhcCCCCCCEEEeCCc-ccE
Confidence 444322 2233444444444444332 33344444555555555555432 333
Q ss_pred CCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCC
Q 002826 414 QIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSD 455 (876)
Q Consensus 414 ~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 455 (876)
+.. +|.++++|+.+++..| ++.+...+|.++++|+.+++..
T Consensus 334 I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 334 IGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPK 375 (394)
T ss_dssp ECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEG
T ss_pred EhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECC
Confidence 222 4555555555555544 4444445555555555555543
No 390
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.56 E-value=3.7e-14 Score=158.20 Aligned_cols=316 Identities=13% Similarity=0.105 Sum_probs=200.4
Q ss_pred cccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccC
Q 002826 111 FNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQ 190 (876)
Q Consensus 111 l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 190 (876)
++.+...+|.++++|+++.|.+ +++.+-..+|.++++|+.++|.++ ++.+...+|.++++|+.+.+..
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-----------~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~ 126 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-----------TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPL 126 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-----------TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-----------CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccC
Confidence 4445556666666666665542 233333455666666666666543 4444455566666665554444
Q ss_pred CCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCc
Q 002826 191 NAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGS 270 (876)
Q Consensus 191 N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~ 270 (876)
+ +..+...+|.++..++..... .+. .+....|.++.+|+.+.+.++. ..+
T Consensus 127 ~--------------------------l~~i~~~aF~~~~~~~~~~~~--~~~-~i~~~aF~~c~~L~~i~l~~~~-~~I 176 (394)
T 4fs7_A 127 M--------------------------LKSIGVEAFKGCDFKEITIPE--GVT-VIGDEAFATCESLEYVSLPDSM-ETL 176 (394)
T ss_dssp T--------------------------CCEECTTTTTTCCCSEEECCT--TCC-EECTTTTTTCTTCCEEECCTTC-CEE
T ss_pred c--------------------------eeeecceeeecccccccccCc--ccc-ccchhhhcccCCCcEEecCCcc-cee
Confidence 3 222333444444332222221 122 3334445555666666665443 224
Q ss_pred CCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecCCcccccCccccccC
Q 002826 271 FPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAESNRFSGAIPDSISMA 350 (876)
Q Consensus 271 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 350 (876)
...+|.++.+|+.+++..| ++.+...+|.++..|+.+.+.++... +.+.+....+|+.+.+..+ ++.+....|..+
T Consensus 177 ~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~ 252 (394)
T 4fs7_A 177 HNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGC 252 (394)
T ss_dssp CTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTC
T ss_pred ccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceeccccccccc
Confidence 4555666666666666655 44455667777777777776665432 2333444567777777543 344566677888
Q ss_pred CCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCc-CcccccccceEec
Q 002826 351 AQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSL 429 (876)
Q Consensus 351 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L 429 (876)
..|+.+.+..+..+ .....|.....++.+....+.+ ....|..+.+|+.+.+..+ ++.+.. +|.++.+|+.++|
T Consensus 253 ~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~l 327 (394)
T 4fs7_A 253 TDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDL 327 (394)
T ss_dssp SSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECC
T ss_pred ccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEe
Confidence 88888888777554 5566778888888887766543 3457888999999999865 554444 7999999999999
Q ss_pred cCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccc-ccceEEccCC
Q 002826 430 ADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL-KLALFNVSFN 479 (876)
Q Consensus 430 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~ls~N 479 (876)
..+ ++.+...+|.++.+|+.+++..| ++..-...|.+. +|+.+++..|
T Consensus 328 p~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 328 PYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred CCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 755 77677899999999999999887 776667788886 6888888754
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=1.1e-16 Score=160.37 Aligned_cols=131 Identities=21% Similarity=0.204 Sum_probs=51.8
Q ss_pred cccceecccccccCCCcCc------cccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCC
Q 002826 157 VNLQVLNLGSNLLSGSVPF------VFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQ 230 (876)
Q Consensus 157 ~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 230 (876)
..++.++++.|.+++..|. .|.++++|++|+|++|+ +..+| .+.++++|++|++++|+++. +|..+..++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~--l~~l~-~~~~l~~L~~L~l~~n~l~~-l~~~~~~~~ 93 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNN--IEKIS-SLSGMENLRILSLGRNLIKK-IENLDAVAD 93 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEE--ESCCC-CHHHHTTCCEEEEEEEEECS-CSSHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCC--Ccccc-ccccCCCCCEEECCCCCccc-ccchhhcCC
Confidence 3444444444444444333 33333444444444433 22233 33333333333333333331 233333334
Q ss_pred CCcEEecccCccCCCCCCccccccccccEEEeccccccCcCC-cccccCCccceeeeeccccccc
Q 002826 231 SLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFP-NGICKANGLVNLSLHKNFFNGS 294 (876)
Q Consensus 231 ~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~ 294 (876)
+|++|+|++|+|+ .+| . +..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++.
T Consensus 94 ~L~~L~L~~N~l~-~l~-~-~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 94 TLEELWISYNQIA-SLS-G-IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HCSEEEEEEEECC-CHH-H-HHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred cCCEEECcCCcCC-cCC-c-cccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 4444444444444 233 1 1224444444444444442211 2334444444444444444433
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=7.5e-15 Score=143.99 Aligned_cols=82 Identities=17% Similarity=0.304 Sum_probs=37.4
Q ss_pred cccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCc--ccccCCcccee
Q 002826 207 KLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPN--GICKANGLVNL 284 (876)
Q Consensus 207 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L 284 (876)
+|++|+|++|++++. ..|.++++|++|+|++|+|+ .+|+.++..+++|++|+|++|+|+ .+|. .+..+++|+.|
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 444444444444433 34444555555555555554 344443334455555555555543 2222 34444444444
Q ss_pred eeeccccc
Q 002826 285 SLHKNFFN 292 (876)
Q Consensus 285 ~L~~N~i~ 292 (876)
++++|.++
T Consensus 119 ~l~~N~i~ 126 (176)
T 1a9n_A 119 CILRNPVT 126 (176)
T ss_dssp ECCSSGGG
T ss_pred EecCCCCC
Confidence 44444444
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=8.1e-15 Score=143.76 Aligned_cols=134 Identities=17% Similarity=0.197 Sum_probs=79.1
Q ss_pred ccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCcccccc
Q 002826 226 FVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNL 305 (876)
Q Consensus 226 ~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 305 (876)
+.++.+|++|++++|+++ .+|. +....++|++|+|++|+|++. ..+..+++|++|+|++|.|++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 455666666666666666 4443 333233666666666666644 456666666666666666665544445666666
Q ss_pred ceeecccccCCCCCCc--ccCCCCcccEEEecCCcccccCcc---ccccCCCCCeeeccCcccC
Q 002826 306 ERFQVQDNGFSGDFPD--KLWSLPRIKLIRAESNRFSGAIPD---SISMAAQLEQVQIDNNRFT 364 (876)
Q Consensus 306 ~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~ 364 (876)
++|++++|+|+ .+|. .+..+++|+.|++++|+++...+. .+..+++|+.|++++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 66666666665 3333 556666666666666666533221 3556666666666666554
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=3.2e-16 Score=157.10 Aligned_cols=152 Identities=19% Similarity=0.232 Sum_probs=100.3
Q ss_pred cCcccEEEecCCCCcccCCc------cccCCCCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccC
Q 002826 205 LEKLEQLFLQSSGFHGVIPD------SFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKA 278 (876)
Q Consensus 205 l~~L~~L~L~~n~l~~~~~~------~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (876)
...++.++++.+.+.+..|. .|..+++|++|+|++|+|+ .+| . +..+++|++|+|++|+++ .+|..+..+
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~-~l~-~-~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-KIS-S-LSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEES-CCC-C-HHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCc-ccc-c-cccCCCCCEEECCCCCcc-cccchhhcC
Confidence 34444455555555555444 6777777777777777777 466 3 345777777777777777 456666666
Q ss_pred CccceeeeecccccccCCCCCccccccceeecccccCCCCCC-cccCCCCcccEEEecCCcccccCccc----------c
Q 002826 279 NGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFP-DKLWSLPRIKLIRAESNRFSGAIPDS----------I 347 (876)
Q Consensus 279 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~----------~ 347 (876)
++|++|+|++|++++. | .+..+++|++|++++|++++..+ ..+..+++|++|++++|++++.+|.. +
T Consensus 93 ~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 170 (198)
T 1ds9_A 93 DTLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVV 170 (198)
T ss_dssp HHCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHH
T ss_pred CcCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHH
Confidence 7777777777777753 3 46677777777777777774333 46777778888888888877665542 5
Q ss_pred ccCCCCCeeeccCcccC
Q 002826 348 SMAAQLEQVQIDNNRFT 364 (876)
Q Consensus 348 ~~l~~L~~L~L~~N~l~ 364 (876)
..+++|+.|| +|.++
T Consensus 171 ~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 171 KRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHCSSCSEEC--CGGGT
T ss_pred HhCCCcEEEC--CcccC
Confidence 6666777665 55554
No 395
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.53 E-value=5.4e-15 Score=160.33 Aligned_cols=138 Identities=12% Similarity=0.067 Sum_probs=92.8
Q ss_pred cccCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCc--------------cCHHHH--------HHHHHHHhhccCcccc
Q 002826 584 DEKSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGC--------------QSSKTL--------KTEVKTLAKIRHKNIV 641 (876)
Q Consensus 584 ~~~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~~--------~~E~~~l~~l~h~niv 641 (876)
|++...+|.|++|.||+|..++|+.||||+++.... ...... .+|...+.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 444444444559999999989999999998753211 011122 2344455555333322
Q ss_pred ceeeEEEeCCeEEEEEEcCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCC-
Q 002826 642 KVLGFFHSDESIFLIYEFLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFE- 720 (876)
Q Consensus 642 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~- 720 (876)
.. ..+.. ...++||||++|++|.++... ....+++.|++.++.|||+. ||+||||||.|||+++++.
T Consensus 177 vp-~p~~~-~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 177 VP-EPIAQ-SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp CC-CEEEE-ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECS
T ss_pred CC-eeeec-cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCc
Confidence 11 11111 123699999999888765422 13456889999999999999 9999999999999987763
Q ss_pred ---------eEEccccchhhcc
Q 002826 721 ---------PKLTDFALDRIVG 733 (876)
Q Consensus 721 ---------~kl~DfGla~~~~ 733 (876)
+.|+||+-+....
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEETT
T ss_pred ccccccccceEEEEeCCcccCC
Confidence 8999999776543
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=1.5e-13 Score=133.72 Aligned_cols=107 Identities=21% Similarity=0.210 Sum_probs=89.0
Q ss_pred CCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccC
Q 002826 353 LEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLAD 431 (876)
Q Consensus 353 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~ 431 (876)
.+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++.++ .|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 467788888887 4665553 678888888888888888888888889999999999988777 578899999999999
Q ss_pred CcCCCCCCcCCCCCCCcceeeCCCCcccccC
Q 002826 432 NSLTGEIPPSLAELPVLTYLDLSDNNLTGPI 462 (876)
Q Consensus 432 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 462 (876)
|+|++..+..|..+++|++|+|++|+++...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 9999877888999999999999999988543
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=2e-13 Score=132.84 Aligned_cols=106 Identities=17% Similarity=0.185 Sum_probs=72.0
Q ss_pred CcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecc
Q 002826 232 LSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQ 311 (876)
Q Consensus 232 L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 311 (876)
.+.+++++|+++ .+|..++ ++|++|+|++|+|++..|..|..+++|++|+|++|+|+++.+..|..+++|++|+|+
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~---~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP---TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC---CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 467777777777 6776553 567777777777776666667777777777777777776666666666667777777
Q ss_pred cccCCCCCCcccCCCCcccEEEecCCcccc
Q 002826 312 DNGFSGDFPDKLWSLPRIKLIRAESNRFSG 341 (876)
Q Consensus 312 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 341 (876)
+|+|++..+..|..+++|+.|+|++|.++.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 766666555566666666666666666653
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=3.5e-13 Score=131.53 Aligned_cols=104 Identities=22% Similarity=0.247 Sum_probs=87.1
Q ss_pred CeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCc-CcccccccceEeccCC
Q 002826 354 EQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIP-ELKKCRKLVSLSLADN 432 (876)
Q Consensus 354 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N 432 (876)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++.++ .|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56777888776 5666554 678888888888888888888888888999999999988777 4788999999999999
Q ss_pred cCCCCCCcCCCCCCCcceeeCCCCcccc
Q 002826 433 SLTGEIPPSLAELPVLTYLDLSDNNLTG 460 (876)
Q Consensus 433 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 460 (876)
+|++..+..|..+++|++|+|++|++..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 9997777779999999999999999984
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=3.9e-13 Score=131.22 Aligned_cols=104 Identities=20% Similarity=0.346 Sum_probs=62.5
Q ss_pred eEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccccccccccEEEec
Q 002826 184 VVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVS 263 (876)
Q Consensus 184 ~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~ 263 (876)
+.+++++|+ ++.+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+ .+|...+..+++|++|+|+
T Consensus 15 ~~l~~~~n~--l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 15 TLVNCQNIR--LASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp SEEECCSSC--CSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred cEEEeCCCC--CCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCC-ccChhHhCCcchhhEEECC
Confidence 455666665 455555443 56666666666666666666666666777777777666 4555555556666666666
Q ss_pred cccccCcCCcccccCCccceeeeeccccc
Q 002826 264 QNKLSGSFPNGICKANGLVNLSLHKNFFN 292 (876)
Q Consensus 264 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 292 (876)
+|+|++..+..|..+++|++|+|++|.+.
T Consensus 90 ~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 66666444444555555555555555554
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.39 E-value=6.9e-12 Score=139.75 Aligned_cols=115 Identities=11% Similarity=0.173 Sum_probs=65.8
Q ss_pred cccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccCCc-Cc
Q 002826 340 SGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQIP-EL 418 (876)
Q Consensus 340 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~ 418 (876)
+.+...+|..+.+|+.+.+.++..+ .....|.++++|+.+.+. +.++.+....|.++.+|+.++|..+ ++.+.. +|
T Consensus 254 ~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF 330 (394)
T 4gt6_A 254 ARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAF 330 (394)
T ss_dssp EEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTT
T ss_pred eEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHh
Confidence 3344455555556666655544332 344455556666666654 3444455556666666666666543 433333 56
Q ss_pred ccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcc
Q 002826 419 KKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNL 458 (876)
Q Consensus 419 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 458 (876)
.++.+|+.+.|..+ ++.+...+|.++++|+.+++.+|..
T Consensus 331 ~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 331 AGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred hCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 66777777777543 5545556677777777777766654
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.38 E-value=2.9e-11 Score=134.76 Aligned_cols=330 Identities=12% Similarity=0.158 Sum_probs=165.4
Q ss_pred cccCCC-CCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCC
Q 002826 94 SVCELS-SLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGS 172 (876)
Q Consensus 94 ~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 172 (876)
+|.+.. .|+.+.+.++ ++.+...+|.++++|+.+.++.|.- +.++.+-..+|.+..+|+.+.+..+ ++.+
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p-------~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I 128 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKP-------SCVKKIGRQAFMFCSELTDIPILDS-VTEI 128 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCC-------CCCCEECTTTTTTCTTCCBCGGGTT-CSEE
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCC-------CeeeEechhhchhcccceeeccCCc-ccee
Confidence 344443 4777777543 6666667777777777776554421 1233333456666667776666544 4445
Q ss_pred cCccccCCCcceEEEccCCCCcCCCCC-CcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCccc
Q 002826 173 VPFVFGNFSELVVLDLSQNAYLISEIP-SDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLG 251 (876)
Q Consensus 173 ~p~~~~~l~~L~~L~Ls~N~~~~~~~p-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~ 251 (876)
...+|.+..+|+.+.+..+ ...++ ..|....+|+.+.+..+ +..+...+|.+ .+|+.+.+..+- + .+....|
T Consensus 129 ~~~aF~~c~~L~~i~lp~~---~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~-~-~i~~~af 201 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEG---VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKV-T-RIGTNAF 201 (394)
T ss_dssp CTTTTTTCTTCCEEECCTT---CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTC-C-EECTTTT
T ss_pred hhhhhhhhcccccccccce---eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcc-c-ccccchh
Confidence 5566677777777777654 22333 23556666666666543 44444445543 456666665432 2 2334444
Q ss_pred cccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccE
Q 002826 252 SSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKL 331 (876)
Q Consensus 252 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 331 (876)
.++.++.......+.... ....+..........+ ..+.....+..+.+. +.++.....+|.++++|+.
T Consensus 202 ~~c~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~ 269 (394)
T 4gt6_A 202 SECFALSTITSDSESYPA-IDNVLYEKSANGDYAL----------IRYPSQREDPAFKIP-NGVARIETHAFDSCAYLAS 269 (394)
T ss_dssp TTCTTCCEEEECCSSSCB-SSSCEEEECTTSCEEE----------EECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCE
T ss_pred hhccccceeccccccccc-ccceeecccccccccc----------cccccccccceEEcC-CcceEcccceeeecccccE
Confidence 455555555554444331 1111110000000000 000011122222221 1222233445555555555
Q ss_pred EEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCcc
Q 002826 332 IRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSI 411 (876)
Q Consensus 332 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l 411 (876)
+.+..+.. .+...+|.++.+|+.+.+. +.++......|.++.+|+.+.+..+ ++.+....|.++.+|+.+.+..+ +
T Consensus 270 i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v 345 (394)
T 4gt6_A 270 VKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-V 345 (394)
T ss_dssp EECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-C
T ss_pred Eecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-c
Confidence 55544433 2445555666666666664 3344344455666666666666543 55455666777777777777544 5
Q ss_pred ccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcc
Q 002826 412 SGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNL 458 (876)
Q Consensus 412 ~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 458 (876)
+.+.. +|.++++|+.+++.+|... -..|....+|+.+.+..|.+
T Consensus 346 ~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 346 TKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC----------
T ss_pred CEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCE
Confidence 44434 6777888888888777643 14566677777777766654
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=1.9e-12 Score=141.70 Aligned_cols=107 Identities=20% Similarity=0.198 Sum_probs=85.0
Q ss_pred ccccceEecCCCCCccEEEEeecCCCCCcccccccccCCCCCCeeecCC-CccccccCccccCCCCCCcccCCCccccee
Q 002826 60 CNWTGVTCVTTATASLTVASINLQSLNLSGEISSSVCELSSLSNLNLAD-NLFNQPIPLHLSQCSSLETLNLSNNLIWVL 138 (876)
Q Consensus 60 C~w~gv~c~~~~~~~~~~~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~L 138 (876)
|.|.+|.|... ++|++ +|. +..+++|++|+|++ |.|++..|..|++|++|++|+
T Consensus 8 C~~~~v~~~~~--------------n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~--------- 62 (347)
T 2ifg_A 8 HGSSGLRCTRD--------------GALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLT--------- 62 (347)
T ss_dssp SSSSCEECCSS--------------CCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEE---------
T ss_pred ccCCEEEcCCC--------------CCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEE---------
Confidence 88988888543 13443 677 88899999999996 999988888899998888774
Q ss_pred ecCCccccccCCCccCCccccceecccccccCCCcCccccCCCcceEEEccCCCC
Q 002826 139 DLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAY 193 (876)
Q Consensus 139 dL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~ 193 (876)
|++|+|++..|..|.+|++|++|+|++|+|++..+..|..++ |++|+|++|.+
T Consensus 63 -l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~ 115 (347)
T 2ifg_A 63 -IVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPL 115 (347)
T ss_dssp -CCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCC
T ss_pred -CCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCc
Confidence 445566777788888899999999999999877777777766 88888888873
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=2.1e-14 Score=158.05 Aligned_cols=135 Identities=12% Similarity=0.150 Sum_probs=59.4
Q ss_pred CCCcEEecccCccCCCCCCccccccccccEEEeccccccCcCCcccc-----cCCccceeeeeccccccc----CCCCCc
Q 002826 230 QSLSILDLSQNNLTGEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGIC-----KANGLVNLSLHKNFFNGS----IPGSIN 300 (876)
Q Consensus 230 ~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~i~~~----~~~~~~ 300 (876)
++|++|+|++|.|+......+...+++|++|+|++|+|+......++ ..++|++|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 35555555555554222222333344555555555555433222221 234455555555555421 111223
Q ss_pred cccccceeecccccCCCCC----CcccCCCCcccEEEecCCcccccC----ccccccCCCCCeeeccCcccC
Q 002826 301 ECLNLERFQVQDNGFSGDF----PDKLWSLPRIKLIRAESNRFSGAI----PDSISMAAQLEQVQIDNNRFT 364 (876)
Q Consensus 301 ~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~ 364 (876)
.+++|++|+|++|.|++.. +..+...++|+.|+|++|.|++.. ...+...++|++|+|++|.|+
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 3444455555555444211 233344445555555555554322 222333445555555555554
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.25 E-value=3.5e-14 Score=156.28 Aligned_cols=87 Identities=18% Similarity=0.109 Sum_probs=35.5
Q ss_pred cccceecccccccCCCcCccccC-----CCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccc-----
Q 002826 157 VNLQVLNLGSNLLSGSVPFVFGN-----FSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSF----- 226 (876)
Q Consensus 157 ~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~----- 226 (876)
++|++|+|++|.|+......+.. .++|++|+|++|.+....+..-...+++|++|+|++|+++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 34555555555554332222221 14555555555542110011111223444555555554443222222
Q ss_pred cCCCCCcEEecccCccC
Q 002826 227 VGLQSLSILDLSQNNLT 243 (876)
Q Consensus 227 ~~l~~L~~L~Ls~N~l~ 243 (876)
...++|++|+|++|.|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~ 168 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLT 168 (372)
T ss_dssp STTCCCCEEECCSSCCH
T ss_pred hcCCccceeeCCCCCCC
Confidence 12344555555555554
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=1.7e-11 Score=134.20 Aligned_cols=129 Identities=11% Similarity=0.061 Sum_probs=63.0
Q ss_pred ecccc-cCCCCCCcccCCCCcccEEEecC-CcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCcc
Q 002826 309 QVQDN-GFSGDFPDKLWSLPRIKLIRAES-NRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNS 386 (876)
Q Consensus 309 ~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 386 (876)
+++++ +|++ +|. +..+++|+.|+|++ |+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 14 ~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 44444 4442 333 44455555555553 55555555555555555555555555555555555555555555555555
Q ss_pred ccCCCCCCcCCCCCccEEEccCCccccCCc--CcccccccceEeccCCcCCCCCCc
Q 002826 387 FYGSLPPNFCDSPVMSIINLSQNSISGQIP--ELKKCRKLVSLSLADNSLTGEIPP 440 (876)
Q Consensus 387 l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~ 440 (876)
|++..+..|..++ |+.|+|++|.+...-. .|..+.+.....+..++++-..|.
T Consensus 92 l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp CSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred cceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 5544444444444 6666666666654322 233333333333444444444443
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.20 E-value=4.4e-11 Score=125.24 Aligned_cols=138 Identities=15% Similarity=0.023 Sum_probs=106.4
Q ss_pred cCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhcc-CccccceeeEEEeCCeEEEEEEcCCCCC
Q 002826 586 KSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIR-HKNIVKVLGFFHSDESIFLIYEFLQMGS 664 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gs 664 (876)
.....+||+.+.||++.. .++.+++|+...........+.+|+++++.+. +..+.++++++.+.+..|+||||++|.+
T Consensus 18 ~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~ 96 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVL 96 (263)
T ss_dssp EEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEE
T ss_pred eEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCee
Confidence 344455565899999976 47899999986532233456889999999994 6788899999999999999999999999
Q ss_pred HHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccC---------------------------------------------
Q 002826 665 LGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDY--------------------------------------------- 699 (876)
Q Consensus 665 L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------------- 699 (876)
+.+.+.. ......++.+++++++.||+..
T Consensus 97 l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (263)
T 3tm0_A 97 CSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPREL 170 (263)
T ss_dssp HHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHH
T ss_pred hhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHH
Confidence 9876321 1223467889999999999810
Q ss_pred -----------CCCccccccccCceeeCCCCCeEEccccchh
Q 002826 700 -----------VPHLLHRNVKSKNILLDADFEPKLTDFALDR 730 (876)
Q Consensus 700 -----------~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~ 730 (876)
.+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 171 ~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 171 YDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1368999999999999876556799998653
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.17 E-value=9.4e-10 Score=121.78 Aligned_cols=313 Identities=11% Similarity=0.098 Sum_probs=136.1
Q ss_pred ccCCCCCCeeecCCCccccccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCccccceecccccccCCCcC
Q 002826 95 VCELSSLSNLNLADNLFNQPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVP 174 (876)
Q Consensus 95 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 174 (876)
+..-.+|+.+.+.. .++.+...+|.++++|+.++|.++ ++.+-..+|.+. +|+.+.+..+ ++.+..
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-----------v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~ 107 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-----------VTSIGDGAFADT-KLQSYTGMER-VKKFGD 107 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-----------CCEECTTTTTTC-CCCEEEECTT-CCEECT
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-----------ceEechhhhcCC-CCceEECCce-eeEecc
Confidence 33445566666643 355555566666666666655432 222233444443 4555554433 333444
Q ss_pred ccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccccCCCCCcEEecccCccCCCCCCcccccc
Q 002826 175 FVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQNNLTGEVPQSLGSSL 254 (876)
Q Consensus 175 ~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l 254 (876)
.+|.+ .+|+.+++..+ ...+......-.+|+.+.+..+ ++.+....|.++.+++.+.+..+... .+......
T Consensus 108 ~aF~~-~~L~~i~lp~~---~~~i~~~~F~~~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~-~~~~~~~~-- 179 (379)
T 4h09_A 108 YVFQG-TDLDDFEFPGA---TTEIGNYIFYNSSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKN-YVAENYVL-- 179 (379)
T ss_dssp TTTTT-CCCSEEECCTT---CCEECTTTTTTCCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSS-EEEETTEE--
T ss_pred ceecc-CCcccccCCCc---cccccccccccceeeeeeccce-eeccccchhcccccccccccccccce-eeccccee--
Confidence 44544 35666666554 2222222112223444443322 33333444555555555544443322 11000000
Q ss_pred ccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEe
Q 002826 255 LKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRA 334 (876)
Q Consensus 255 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 334 (876)
.|... .....+.....+..+.+..+. .......|..+.+|+.+.+..+ +.......|.+...|+.+.+
T Consensus 180 ---------~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~l 247 (379)
T 4h09_A 180 ---------YNKNK-TILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAI 247 (379)
T ss_dssp ---------EETTS-SEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEE
T ss_pred ---------ccccc-ceeccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEc
Confidence 00000 111122222333333332221 1233344444555555544333 22233344444444544444
Q ss_pred cCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCccEEEccCCccccC
Q 002826 335 ESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMSIINLSQNSISGQ 414 (876)
Q Consensus 335 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~ 414 (876)
..+ ++.+...+|..+.+|+.+.+..+ +.......|.++.+|+.+++.++.++.+
T Consensus 248 p~~-v~~I~~~aF~~~~~l~~i~l~~~-------------------------i~~i~~~aF~~c~~L~~i~l~~~~i~~I 301 (379)
T 4h09_A 248 PKN-VTSIGSFLLQNCTALKTLNFYAK-------------------------VKTVPYLLCSGCSNLTKVVMDNSAIETL 301 (379)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEECCC-------------------------CSEECTTTTTTCTTCCEEEECCTTCCEE
T ss_pred CCC-ccEeCccccceeehhcccccccc-------------------------ceecccccccccccccccccccccccee
Confidence 433 33333444444444444444322 3333344455555555555555555544
Q ss_pred Cc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccc
Q 002826 415 IP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL 469 (876)
Q Consensus 415 ~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 469 (876)
.. .|.++.+|+.++|..+ ++.+...+|.++++|+.+.+..+ ++..-...|.+.
T Consensus 302 ~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 302 EPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred hhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 33 5566666666666543 44444556666666666666544 443333444443
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.13 E-value=1.2e-10 Score=121.53 Aligned_cols=133 Identities=16% Similarity=0.068 Sum_probs=101.1
Q ss_pred cCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCcc--ccceeeEEEeCCeEEEEEEcCCCC
Q 002826 586 KSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKN--IVKVLGFFHSDESIFLIYEFLQMG 663 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~g 663 (876)
...+++||..+.||++...+|+.+++|+.... ....+.+|+++++.+++.+ +.+++++...++..++||||++|.
T Consensus 24 ~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~ 100 (264)
T 1nd4_A 24 WAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQ 100 (264)
T ss_dssp EEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSE
T ss_pred eEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCc
Confidence 34455677679999998878889999997543 2356788999999996544 556888888888899999999998
Q ss_pred CHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccC--------------------------------------------
Q 002826 664 SLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDY-------------------------------------------- 699 (876)
Q Consensus 664 sL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------------------------------------------- 699 (876)
++. ... .+ ...++.++++.++.||+..
T Consensus 101 ~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 101 DLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp ETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred ccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 884 211 11 2356778888888888742
Q ss_pred -----------CCCccccccccCceeeCCCCCeEEccccchh
Q 002826 700 -----------VPHLLHRNVKSKNILLDADFEPKLTDFALDR 730 (876)
Q Consensus 700 -----------~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~ 730 (876)
.+.++|+|++|.||+++++..+.|+|||.+.
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999877667799998754
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.13 E-value=2.2e-09 Score=118.75 Aligned_cols=152 Identities=11% Similarity=0.082 Sum_probs=106.7
Q ss_pred cCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcccCCCCCCccccccCccEEeCCCccccCCCCCCcCCCCCcc
Q 002826 323 LWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNRFTSSIPQGLGSVKSLYRFSASQNSFYGSLPPNFCDSPVMS 402 (876)
Q Consensus 323 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~ 402 (876)
+.....+..+.+..+. .......+....+|+.+.+..+ ++......|.+...|+.+.+..+ ++.+....|.+...|+
T Consensus 190 ~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~ 266 (379)
T 4h09_A 190 YPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALK 266 (379)
T ss_dssp CCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred ccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhc
Confidence 3333444444443332 2244555666677777777654 33345556777777888877665 5556677888899999
Q ss_pred EEEccCCccccCCc-CcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCcccccCCCccccc-ccceEEccCC
Q 002826 403 IINLSQNSISGQIP-ELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGPIPQGLQNL-KLALFNVSFN 479 (876)
Q Consensus 403 ~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~l~ls~N 479 (876)
.+.+..+ +..... .|.++++|+.+.+.+|.++.+.+.+|.++.+|+.++|..+ ++..-...|.+. +|+.+.+..+
T Consensus 267 ~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 267 TLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp EEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 9999765 544444 7999999999999999999788899999999999999865 765556678775 5776666543
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.90 E-value=2.4e-10 Score=124.52 Aligned_cols=162 Identities=12% Similarity=0.135 Sum_probs=73.2
Q ss_pred ccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCcccc--CCCCCcEEeccc--CccCCCC----
Q 002826 175 FVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSFV--GLQSLSILDLSQ--NNLTGEV---- 246 (876)
Q Consensus 175 ~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~Ls~--N~l~~~i---- 246 (876)
..+..+++|+.|+|++|. ...++. + .+++|++|.|..|.++......+. .+++|++|+|+. |...+..
T Consensus 166 ~ll~~~P~L~~L~L~g~~--~l~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~ 241 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTN--NLSIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNV 241 (362)
T ss_dssp HHHHTCTTCCEEEEECCB--TCBCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGG
T ss_pred HHHhcCCCCcEEEEeCCC--Cceecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHH
Confidence 344455666666666552 112232 2 255666666666665432222232 466666666642 2211110
Q ss_pred -CCccc-cccccccEEEeccccccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecccccCCCCC----C
Q 002826 247 -PQSLG-SSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQDNGFSGDF----P 320 (876)
Q Consensus 247 -p~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~----p 320 (876)
...+. ..+++|++|+|++|.+.+..+..+.. ...+++|++|+|+.|.+++.. +
T Consensus 242 l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~---------------------a~~~~~L~~LdLs~n~L~d~G~~~L~ 300 (362)
T 2ra8_A 242 FRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLE---------------------SDILPQLETMDISAGVLTDEGARLLL 300 (362)
T ss_dssp TGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHH---------------------CSSGGGCSEEECCSSCCBHHHHHHHH
T ss_pred HHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHh---------------------CccCCCCCEEECCCCCCChHHHHHHH
Confidence 00010 12345555555555444222111110 012445555555555555422 2
Q ss_pred cccCCCCcccEEEecCCcccccCccccccCCCCCeeeccCcc
Q 002826 321 DKLWSLPRIKLIRAESNRFSGAIPDSISMAAQLEQVQIDNNR 362 (876)
Q Consensus 321 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 362 (876)
..+..+++|+.|++++|.|+...-..+...- ...+++++|+
T Consensus 301 ~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 301 DHVDKIKHLKFINMKYNYLSDEMKKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp TTHHHHTTCSEEECCSBBCCHHHHHHHHHHC-CSEEECCSBC
T ss_pred hhcccCCcceEEECCCCcCCHHHHHHHHHHc-CCEEEecCCc
Confidence 2223456666666666666544333333210 3557777776
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.89 E-value=1.2e-10 Score=127.00 Aligned_cols=191 Identities=17% Similarity=0.158 Sum_probs=88.4
Q ss_pred cccccCCCCCCeeecCCCccc---------cccCccccCCCCCCcccCCCcccceeecCCccccccCCCccCCcccccee
Q 002826 92 SSSVCELSSLSNLNLADNLFN---------QPIPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGKIPESIGSLVNLQVL 162 (876)
Q Consensus 92 ~~~~~~l~~L~~L~L~~n~l~---------~~~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~~p~~~~~l~~L~~L 162 (876)
.+++..+++|+.|.+.++... +.++..+..+++|++|+|++|. .+ .++. + .+++|++|
T Consensus 132 ~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~---------~l--~l~~-~-~~~~L~~L 198 (362)
T 2ra8_A 132 VENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTN---------NL--SIGK-K-PRPNLKSL 198 (362)
T ss_dssp HTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCB---------TC--BCCS-C-BCTTCSEE
T ss_pred HHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCC---------Cc--eecc-c-cCCCCcEE
Confidence 445566778888887665331 1233344555666666554431 01 1121 2 25666666
Q ss_pred cccccccCCCcCcccc--CCCcceEEEccCCCCcCCCCCCcccccCcccEEEecCCCCcccCCccc--cCCCCCcEEecc
Q 002826 163 NLGSNLLSGSVPFVFG--NFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFLQSSGFHGVIPDSF--VGLQSLSILDLS 238 (876)
Q Consensus 163 ~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~--~~l~~L~~L~Ls 238 (876)
+|..|.++......+. .+++|++|+|+.+....+.-+ . +.++ ...+ ..+++|++|+|+
T Consensus 199 ~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~-~----------------~~~l-~~~l~~~~~p~Lr~L~L~ 260 (362)
T 2ra8_A 199 EIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG-D----------------MNVF-RPLFSKDRFPNLKWLGIV 260 (362)
T ss_dssp EEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS-C----------------GGGT-GGGSCTTTCTTCCEEEEE
T ss_pred EEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch-h----------------HHHH-HHHHhcCCCCCcCEEeCC
Confidence 6666665533323332 456666666643110000000 0 0000 0011 134556666666
Q ss_pred cCccCCCCCCccc--cccccccEEEeccccccCc----CCcccccCCccceeeeecccccccCCCCCccccccceeeccc
Q 002826 239 QNNLTGEVPQSLG--SSLLKLVSFDVSQNKLSGS----FPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQD 312 (876)
Q Consensus 239 ~N~l~~~ip~~~~--~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 312 (876)
+|.+++..+..++ ..+++|++|+|+.|.|.+. ++..+..+++|+.|+|++|.|+...-..+...- ...+++++
T Consensus 261 ~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al-g~~~~~~~ 339 (362)
T 2ra8_A 261 DAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL-PMKIDVSD 339 (362)
T ss_dssp SCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC-CSEEECCS
T ss_pred CCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc-CCEEEecC
Confidence 6655432222221 1255666666666666543 222334456666777766666533222222200 24466666
Q ss_pred cc
Q 002826 313 NG 314 (876)
Q Consensus 313 N~ 314 (876)
++
T Consensus 340 ~~ 341 (362)
T 2ra8_A 340 SQ 341 (362)
T ss_dssp BC
T ss_pred Cc
Confidence 65
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.85 E-value=5.7e-09 Score=114.48 Aligned_cols=140 Identities=16% Similarity=0.227 Sum_probs=103.6
Q ss_pred CCCCCCCCceEEEEEEeCCCcEEEEEEEe--cCCc-cCHHHHHHHHHHHhhcc--CccccceeeEEEeC---CeEEEEEE
Q 002826 587 SSAGNGGPFGRVYILSLPSGELIAVKKLV--NFGC-QSSKTLKTEVKTLAKIR--HKNIVKVLGFFHSD---ESIFLIYE 658 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~~~~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~---~~~~lv~e 658 (876)
..++ +|.++.||+++.. +..+++|+.. .... .....+.+|+.+++.+. +..++++++++.+. +..|+|||
T Consensus 44 ~~l~-~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 44 EQFK-GGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EECC-C-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEcC-CcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 3444 4558999999875 4678888765 3211 22456888999999996 45688899988776 45899999
Q ss_pred cCCCCCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccC---------------------------------------
Q 002826 659 FLQMGSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDY--------------------------------------- 699 (876)
Q Consensus 659 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------- 699 (876)
|++|.++.+.. ...++...+..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (359)
T 3dxp_A 122 FVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD 198 (359)
T ss_dssp CCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred ecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence 99998775421 224678888899999999999999731
Q ss_pred ----------------CCCccccccccCceeeCCCCC--eEEccccchhh
Q 002826 700 ----------------VPHLLHRNVKSKNILLDADFE--PKLTDFALDRI 731 (876)
Q Consensus 700 ----------------~~~i~H~Dlkp~NIll~~~~~--~kl~DfGla~~ 731 (876)
.+.++|+|+++.||+++.++. +.|+||+.+..
T Consensus 199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997653 58999998764
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.85 E-value=4.8e-11 Score=123.27 Aligned_cols=58 Identities=21% Similarity=0.271 Sum_probs=28.4
Q ss_pred ccccCcccEEEecCCCCcccCCccccCCC--CCcEEecccCccCCCCCC------ccccccccccEEE
Q 002826 202 IGKLEKLEQLFLQSSGFHGVIPDSFVGLQ--SLSILDLSQNNLTGEVPQ------SLGSSLLKLVSFD 261 (876)
Q Consensus 202 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~ip~------~~~~~l~~L~~L~ 261 (876)
+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|. .+...+++|+.||
T Consensus 192 ~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 192 VQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp HHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred HhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 33444444444444444433 1222222 666666666666654542 1233466666554
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.66 E-value=5e-09 Score=112.05 Aligned_cols=183 Identities=20% Similarity=0.146 Sum_probs=116.4
Q ss_pred CCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhcc-Ccc--ccceeeEEEeCC---eEEEEEEcCCCCC
Q 002826 591 NGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIR-HKN--IVKVLGFFHSDE---SIFLIYEFLQMGS 664 (876)
Q Consensus 591 ~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~~~~gs 664 (876)
++|....||++. +.+++|+.... .....+.+|+++++.+. +.. +.+++......+ ..|+|||+++|.+
T Consensus 29 ~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~ 102 (304)
T 3sg8_A 29 GEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVP 102 (304)
T ss_dssp EECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEE
T ss_pred CCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeE
Confidence 445588898753 56888986432 23467889999999884 332 445555443332 3588999999988
Q ss_pred HHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhcc----------------------------------------------
Q 002826 665 LGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKD---------------------------------------------- 698 (876)
Q Consensus 665 L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---------------------------------------------- 698 (876)
+.+... ..++..++..++.++++.++.||+.
T Consensus 103 l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (304)
T 3sg8_A 103 LTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRD 179 (304)
T ss_dssp CCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred CCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHH
Confidence 865332 2467777888888999988888861
Q ss_pred ---------CCCCccccccccCceeeCC--CCCeEEccccchhhccccccccccccc---cc---------cccccC-cc
Q 002826 699 ---------YVPHLLHRNVKSKNILLDA--DFEPKLTDFALDRIVGEAAFQSTMSSE---YA---------LSCYNA-PE 754 (876)
Q Consensus 699 ---------~~~~i~H~Dlkp~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~~~---~g---------t~~y~a-PE 754 (876)
..+.++|+|++|.||++++ +..+.++||+.+..-............ .+ ..++.. |+
T Consensus 180 ~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~ 259 (304)
T 3sg8_A 180 ILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPT 259 (304)
T ss_dssp HHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHH
T ss_pred HHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHH
Confidence 1136899999999999987 456789999987653221100000000 00 001111 22
Q ss_pred ccCCCCCCCccchHHHHHHHHHHHhCCCCC
Q 002826 755 YGYSKKATAQMDAYSFGVVLLELITGRQAE 784 (876)
Q Consensus 755 ~~~~~~~~~~~Dv~SlGv~l~elltg~~p~ 784 (876)
.... .....+.|++|.++|.+.+|+.+|
T Consensus 260 ~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 260 VLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1110 011258999999999999998754
No 415
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.38 E-value=8.7e-07 Score=92.74 Aligned_cols=131 Identities=13% Similarity=0.063 Sum_probs=96.9
Q ss_pred CCCceEEEEEEeC-CCcEEEEEEEecCCccCHHHHHHHHHHHhhcc-CccccceeeEEEeCCeEEEEEEcCCCCCHHHHh
Q 002826 592 GGPFGRVYILSLP-SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIR-HKNIVKVLGFFHSDESIFLIYEFLQMGSLGDLI 669 (876)
Q Consensus 592 ~g~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 669 (876)
|.+.+.||+.... ++..+++|+-.. .....+.+|...++.+. +--|.++++++.+.+..++|||+++|.++.+..
T Consensus 35 G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~ 111 (272)
T 4gkh_A 35 GQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVL 111 (272)
T ss_dssp SSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHH
T ss_pred CCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccc
Confidence 3334578987654 567889998653 23456888999999884 334778899999999999999999998887765
Q ss_pred hccCCcCCHHHHHHHHHHHHHHHHHhhcc---------------------------------------------------
Q 002826 670 CRQDFQLQWSIRLKIAIGVAQGLAYLHKD--------------------------------------------------- 698 (876)
Q Consensus 670 ~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------------------------------------------------- 698 (876)
... ......+..+++..++.||+.
T Consensus 112 ~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 186 (272)
T 4gkh_A 112 EEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKL 186 (272)
T ss_dssp HHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTT
T ss_pred cCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhc
Confidence 332 123345667777777777743
Q ss_pred ----CCCCccccccccCceeeCCCCCeEEccccchh
Q 002826 699 ----YVPHLLHRNVKSKNILLDADFEPKLTDFALDR 730 (876)
Q Consensus 699 ----~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~ 730 (876)
..+.++|+|+.+.||++++++.+-|+||+.+.
T Consensus 187 ~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 187 LPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01247899999999999987777799998654
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.30 E-value=1.1e-06 Score=94.35 Aligned_cols=131 Identities=17% Similarity=0.135 Sum_probs=94.9
Q ss_pred CCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccC----ccccceeeEEEeCCeEEEEEEcCCC
Q 002826 587 SSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRH----KNIVKVLGFFHSDESIFLIYEFLQM 662 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~lv~e~~~~ 662 (876)
..+ ++|....||++ |+.+++|+.... .....+.+|.++++.+.+ ..+.+++++ +..++||||++|
T Consensus 43 ~~l-~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 43 RYL-SSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp EEE-EECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred EeC-CCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 344 44558999987 677888876331 223568899999999865 234555554 567899999999
Q ss_pred CCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCC------------------------------------------
Q 002826 663 GSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYV------------------------------------------ 700 (876)
Q Consensus 663 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~------------------------------------------ 700 (876)
.++.+... ..++...+..++.++++.++.||+...
T Consensus 112 ~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (320)
T 3r70_A 112 ERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEH 188 (320)
T ss_dssp BCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred cccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHH
Confidence 88864321 235667777888888888888885421
Q ss_pred ------------------CCccccccccCceeeCCCCCeEEccccchhh
Q 002826 701 ------------------PHLLHRNVKSKNILLDADFEPKLTDFALDRI 731 (876)
Q Consensus 701 ------------------~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~ 731 (876)
+.++|+|++|.||+++.+..+.|+||+.+..
T Consensus 189 ~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 189 IETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2459999999999999866679999998754
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.27 E-value=6.2e-08 Score=100.00 Aligned_cols=39 Identities=28% Similarity=0.349 Sum_probs=15.8
Q ss_pred cccccEEEeccccccC--cCCcccccCCccceeeeeccccc
Q 002826 254 LLKLVSFDVSQNKLSG--SFPNGICKANGLVNLSLHKNFFN 292 (876)
Q Consensus 254 l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~i~ 292 (876)
+++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|+
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~ 209 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 209 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC
Confidence 3444444444444443 12233333444444444444333
No 418
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.25 E-value=3.9e-06 Score=88.39 Aligned_cols=74 Identities=18% Similarity=0.188 Sum_probs=57.4
Q ss_pred CCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCc---cccceeeEEEeCCeEEEEEEcCCCC
Q 002826 587 SSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHK---NIVKVLGFFHSDESIFLIYEFLQMG 663 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~~g 663 (876)
..+++ |.++.||+++..+|+.++||+...........+.+|++.++.+++. .+++++++. ..++||||++|+
T Consensus 21 ~~l~g-G~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 21 AERGH-SHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEE-ETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeCC-cchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 44444 4499999999889999999997544333457889999999999765 577777763 368999999998
Q ss_pred CH
Q 002826 664 SL 665 (876)
Q Consensus 664 sL 665 (876)
++
T Consensus 96 ~~ 97 (288)
T 3d1u_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.25 E-value=4.8e-08 Score=95.93 Aligned_cols=122 Identities=16% Similarity=0.162 Sum_probs=65.4
Q ss_pred CcccccccccCCCCCCeeecCCC-ccccc----cCccccCCCCCCcccCCCcccceeecCCccccc----cCCCccCCcc
Q 002826 87 LSGEISSSVCELSSLSNLNLADN-LFNQP----IPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEG----KIPESIGSLV 157 (876)
Q Consensus 87 l~~~~~~~~~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~----~~p~~~~~l~ 157 (876)
+...+...+...++|++|+|++| .+... +...+...++|++|+|++|.| .. .+...+...+
T Consensus 24 ~~~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i----------~~~g~~~l~~~L~~n~ 93 (185)
T 1io0_A 24 VEETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRS----------NDPVAFALAEMLKVNN 93 (185)
T ss_dssp HHHHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCC----------CHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCC----------ChHHHHHHHHHHHhCC
Confidence 34445666777888888888888 77643 333444455555554444433 21 1122333345
Q ss_pred ccceecccccccCCC----cCccccCCCcceEEEccCCCCcCCCCCCcccccCcccEEEe--cCCCCccc----CCcccc
Q 002826 158 NLQVLNLGSNLLSGS----VPFVFGNFSELVVLDLSQNAYLISEIPSDIGKLEKLEQLFL--QSSGFHGV----IPDSFV 227 (876)
Q Consensus 158 ~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L--~~n~l~~~----~~~~~~ 227 (876)
+|++|+|++|.|+.. +...+...+ +|++|+| ++|.|+.. +...+.
T Consensus 94 ~L~~L~L~~N~i~~~g~~~l~~~L~~n~-------------------------~L~~L~L~~~~N~i~~~g~~~l~~~L~ 148 (185)
T 1io0_A 94 TLKSLNVESNFISGSGILALVEALQSNT-------------------------SLIELRIDNQSQPLGNNVEMEIANMLE 148 (185)
T ss_dssp SCCEEECCSSCCCHHHHHHHHHGGGGCS-------------------------SCCEEECCCCSSCCCHHHHHHHHHHHH
T ss_pred CcCEEECcCCcCCHHHHHHHHHHHHhCC-------------------------CceEEEecCCCCCCCHHHHHHHHHHHH
Confidence 566666666666532 223333344 4455555 44555432 223344
Q ss_pred CCCCCcEEecccCccC
Q 002826 228 GLQSLSILDLSQNNLT 243 (876)
Q Consensus 228 ~l~~L~~L~Ls~N~l~ 243 (876)
..++|++|+|++|.|.
T Consensus 149 ~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 149 KNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HCSSCCEEECCCSSHH
T ss_pred hCCCcCEEeccCCCCC
Confidence 5567777777777765
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.19 E-value=6.1e-06 Score=87.94 Aligned_cols=132 Identities=20% Similarity=0.180 Sum_probs=91.3
Q ss_pred CCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCc---cccceeeEEE-eCCeEEEEEEcCCCCCHH
Q 002826 591 NGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHK---NIVKVLGFFH-SDESIFLIYEFLQMGSLG 666 (876)
Q Consensus 591 ~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~gsL~ 666 (876)
++|....||+. |+.+++|+-.. ......+.+|+++++.+.+. .+.+++.++. ..+..++||||++|.++.
T Consensus 28 ~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~ 101 (306)
T 3tdw_A 28 GEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILG 101 (306)
T ss_dssp EECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECH
T ss_pred CCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECc
Confidence 45657889987 56788888422 12346788999999999642 3667777764 355688999999998886
Q ss_pred HHhhccCCcCCHHHHHHHHHHHHHHHHHhhcc------------------------------------------------
Q 002826 667 DLICRQDFQLQWSIRLKIAIGVAQGLAYLHKD------------------------------------------------ 698 (876)
Q Consensus 667 ~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~------------------------------------------------ 698 (876)
+..- ..++......++.++++.++.||+.
T Consensus 102 ~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 178 (306)
T 3tdw_A 102 EDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQS 178 (306)
T ss_dssp HHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHH
T ss_pred hhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHH
Confidence 6321 1234555555666666666666542
Q ss_pred ---------CCCCccccccccCceeeCC---CCCe-EEccccchhh
Q 002826 699 ---------YVPHLLHRNVKSKNILLDA---DFEP-KLTDFALDRI 731 (876)
Q Consensus 699 ---------~~~~i~H~Dlkp~NIll~~---~~~~-kl~DfGla~~ 731 (876)
..+.++|+|++|.||+++. ++.+ .|+||+.+..
T Consensus 179 ~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 179 YMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1235699999999999987 4564 8999987653
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.17 E-value=1.3e-07 Score=92.83 Aligned_cols=69 Identities=14% Similarity=0.174 Sum_probs=35.4
Q ss_pred CccccCCCCCcEEecccC-ccCCC----CCCccccccccccEEEeccccccCcC----CcccccCCccceeeeeccccc
Q 002826 223 PDSFVGLQSLSILDLSQN-NLTGE----VPQSLGSSLLKLVSFDVSQNKLSGSF----PNGICKANGLVNLSLHKNFFN 292 (876)
Q Consensus 223 ~~~~~~l~~L~~L~Ls~N-~l~~~----ip~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~i~ 292 (876)
...+...++|++|+|++| .|+.. +...+ ...++|++|+|++|+|.... ...+...++|++|+|++|.|+
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L-~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEAL-KTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHH-TTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHH-HhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 344566777888888887 77621 11111 12455666666666665321 222233344555555555444
No 422
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.14 E-value=2.7e-06 Score=92.88 Aligned_cols=76 Identities=8% Similarity=0.063 Sum_probs=53.8
Q ss_pred CCCCceEEEEEEeC-------CCcEEEEEEEecCC---ccCHHHHHHHHHHHhhcc-C--ccccceeeEEEeC---CeEE
Q 002826 591 NGGPFGRVYILSLP-------SGELIAVKKLVNFG---CQSSKTLKTEVKTLAKIR-H--KNIVKVLGFFHSD---ESIF 654 (876)
Q Consensus 591 ~~g~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~---~~~~ 654 (876)
++|....+|+++.. +++.+++|+..... ......+.+|+.+++.+. + -.+.++++++.+. +..+
T Consensus 30 ~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~ 109 (357)
T 3ats_A 30 STGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPF 109 (357)
T ss_dssp TTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCE
T ss_pred CCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCce
Confidence 56668999998664 26788898764322 112356788999999885 3 3577888887654 4578
Q ss_pred EEEEcCCCCCHH
Q 002826 655 LIYEFLQMGSLG 666 (876)
Q Consensus 655 lv~e~~~~gsL~ 666 (876)
+||||++|.++.
T Consensus 110 ~v~e~l~G~~l~ 121 (357)
T 3ats_A 110 FLMDYVEGVVPP 121 (357)
T ss_dssp EEEECCCCBCCC
T ss_pred EEEEecCCCChh
Confidence 999999987654
No 423
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.02 E-value=8.2e-06 Score=89.01 Aligned_cols=70 Identities=13% Similarity=0.067 Sum_probs=52.8
Q ss_pred CCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCc--cccceeeEEEeC-CeEEEEEEcCCCCCHH
Q 002826 591 NGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHK--NIVKVLGFFHSD-ESIFLIYEFLQMGSLG 666 (876)
Q Consensus 591 ~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~-~~~~lv~e~~~~gsL~ 666 (876)
++|....+|+++. +|+.+++|+.... ..+..|+.+++.+... .+.++++++... +..|+||||++|.++.
T Consensus 50 ~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l~ 122 (362)
T 3ovc_A 50 SEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQ 122 (362)
T ss_dssp EECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEETT
T ss_pred CCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCcc
Confidence 3555899999876 6888999987432 3688999999999643 356777777654 6789999999986553
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.93 E-value=3.8e-05 Score=83.06 Aligned_cols=134 Identities=14% Similarity=0.221 Sum_probs=79.7
Q ss_pred CCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccC--ccccceee------EEEeCCeEEEEEEcCCC
Q 002826 591 NGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRH--KNIVKVLG------FFHSDESIFLIYEFLQM 662 (876)
Q Consensus 591 ~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~------~~~~~~~~~lv~e~~~~ 662 (876)
+||..+.||++...+| .+++|+... ....+..|.++++.+.. -.+.+++. +....+..++||||++|
T Consensus 41 ~gG~~n~~~~v~~~~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~G 115 (346)
T 2q83_A 41 QGNQMALVWKVHTDSG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEG 115 (346)
T ss_dssp C----CEEEEEEETTE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCCC
T ss_pred cccccCcEEEEEeCCC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeecC
Confidence 4556899999987555 588998864 23455567777776642 12344443 22346778999999998
Q ss_pred CCHH--------------HHhhcc--CC--c---------CCHHHH-------------------------------HHH
Q 002826 663 GSLG--------------DLICRQ--DF--Q---------LQWSIR-------------------------------LKI 684 (876)
Q Consensus 663 gsL~--------------~~l~~~--~~--~---------l~~~~~-------------------------------~~i 684 (876)
.++. ..++.. .. + ..|... ..+
T Consensus 116 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (346)
T 2q83_A 116 RPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGF 195 (346)
T ss_dssp BCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 6542 011111 00 0 122211 011
Q ss_pred HHHHHHHHHHhhc----------cCCCCccccccccCceeeCCCCCeEEccccch
Q 002826 685 AIGVAQGLAYLHK----------DYVPHLLHRNVKSKNILLDADFEPKLTDFALD 729 (876)
Q Consensus 685 ~~~i~~~l~~LH~----------~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla 729 (876)
...+..++++|++ ...+.++|+|+++.||+++.++.+.|+||+.+
T Consensus 196 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 196 IEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred HHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 1123345666653 12348999999999999988889999999865
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.76 E-value=9.5e-05 Score=81.84 Aligned_cols=73 Identities=15% Similarity=0.160 Sum_probs=46.6
Q ss_pred CCCCCCCceEEEEEEeC-CCcEEEEEEEecCCc-------cCHHHHHHHHHHHhhccC--c-cccceeeEEEeCCeEEEE
Q 002826 588 SAGNGGPFGRVYILSLP-SGELIAVKKLVNFGC-------QSSKTLKTEVKTLAKIRH--K-NIVKVLGFFHSDESIFLI 656 (876)
Q Consensus 588 ~~g~~g~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~lv 656 (876)
.+| +|..+.||+++.. +++.|+||....... ....++..|+++++.+.. | .+.+++.+ +.+..++|
T Consensus 37 ~lg-~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 37 EIG-DGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp ECC-SSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred ECC-CCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 344 4559999999654 578999998653211 123567789999988842 3 34455543 34456899
Q ss_pred EEcCCCC
Q 002826 657 YEFLQMG 663 (876)
Q Consensus 657 ~e~~~~g 663 (876)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999874
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.76 E-value=0.00014 Score=77.02 Aligned_cols=132 Identities=20% Similarity=0.210 Sum_probs=89.0
Q ss_pred CCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhcc---CccccceeeEEEeCCeEEEEEEcCCCCCHH-
Q 002826 591 NGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIR---HKNIVKVLGFFHSDESIFLIYEFLQMGSLG- 666 (876)
Q Consensus 591 ~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~gsL~- 666 (876)
+||....+|+.+. +++.+++|+.... ....+..|++.++.+. ...++++++++...+..++||||++|..+.
T Consensus 45 ~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~~ 120 (312)
T 3jr1_A 45 YSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNKQ 120 (312)
T ss_dssp CCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCCCT
T ss_pred CCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCCCc
Confidence 4556999999886 5778889987642 3567889999999984 357888999988888999999999987642
Q ss_pred -------H---HhhccCC---------------------cCCHHHHH---HHHH----------------HHHHH-HHHh
Q 002826 667 -------D---LICRQDF---------------------QLQWSIRL---KIAI----------------GVAQG-LAYL 695 (876)
Q Consensus 667 -------~---~l~~~~~---------------------~l~~~~~~---~i~~----------------~i~~~-l~~L 695 (876)
+ .++.... .-+|.... ++.. .+... ...|
T Consensus 121 ~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~~L 200 (312)
T 3jr1_A 121 SSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTL 200 (312)
T ss_dssp THHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHh
Confidence 1 1222111 12354321 1111 11111 2234
Q ss_pred hc-cCCCCccccccccCceeeCCCCCeEEcccc
Q 002826 696 HK-DYVPHLLHRNVKSKNILLDADFEPKLTDFA 727 (876)
Q Consensus 696 H~-~~~~~i~H~Dlkp~NIll~~~~~~kl~DfG 727 (876)
.. ...+.++|+|+.+.|++++.++ +.|.|++
T Consensus 201 ~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 201 SKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp TTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred ccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 22 2246899999999999999887 8899974
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.53 E-value=2e-05 Score=75.34 Aligned_cols=84 Identities=12% Similarity=0.089 Sum_probs=43.5
Q ss_pred ccceecccccccCCCcCccccCCCcceEEEccCCCCcCCCCCCccccc----CcccEEEecCCC-CcccCCccccCCCCC
Q 002826 158 NLQVLNLGSNLLSGSVPFVFGNFSELVVLDLSQNAYLISEIPSDIGKL----EKLEQLFLQSSG-FHGVIPDSFVGLQSL 232 (876)
Q Consensus 158 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~p~~~~~l----~~L~~L~L~~n~-l~~~~~~~~~~l~~L 232 (876)
+|+.|||+++.++..--..+.++++|++|+|+++..+...--..+..+ ++|++|+|++|. ++...-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 566666666666654444556666666666666642111111112222 245566665553 554333345556666
Q ss_pred cEEecccCc
Q 002826 233 SILDLSQNN 241 (876)
Q Consensus 233 ~~L~Ls~N~ 241 (876)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666653
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.52 E-value=0.00059 Score=71.68 Aligned_cols=75 Identities=17% Similarity=0.177 Sum_probs=53.4
Q ss_pred cCCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccC---ccccceeeEEEeCCeEEEEEEcCCC
Q 002826 586 KSSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRH---KNIVKVLGFFHSDESIFLIYEFLQM 662 (876)
Q Consensus 586 ~~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~lv~e~~~~ 662 (876)
+..+|+|. .+.||+++..||+.|.+|+...........+..|+..|+.+.- --+.+++++. ..++||||+++
T Consensus 20 v~~~g~G~-~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 20 VAERGHSH-RWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEET-TEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEecCCCC-CeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 34455544 9999999999999999998765444445678899999998842 2345555542 23689999987
Q ss_pred CCH
Q 002826 663 GSL 665 (876)
Q Consensus 663 gsL 665 (876)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.43 E-value=3.8e-05 Score=73.32 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=15.2
Q ss_pred ccEEEecCCCCcccCCccccCCCCCcEEecccC
Q 002826 208 LEQLFLQSSGFHGVIPDSFVGLQSLSILDLSQN 240 (876)
Q Consensus 208 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 240 (876)
|++|+++++.++...-..+.++++|++|+|+++
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 344444444443333333445555555555555
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.23 E-value=0.0011 Score=73.79 Aligned_cols=78 Identities=8% Similarity=0.016 Sum_probs=46.3
Q ss_pred CCccccccccCceeeCCCCCeEEccccchhhccccccccccccccccccccCccccCCC---CCCCccchHHHHHHHHHH
Q 002826 701 PHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSK---KATAQMDAYSFGVVLLEL 777 (876)
Q Consensus 701 ~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~SlGv~l~el 777 (876)
+.++|+|++|.||+++.++ ++++||+.+..-............ -...|++|+..... ......++......+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGN-LILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHH-HHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHH-HHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 4899999999999998776 999999987653321100000000 11235666654311 111234556777777877
Q ss_pred HhC
Q 002826 778 ITG 780 (876)
Q Consensus 778 ltg 780 (876)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.19 E-value=0.0014 Score=70.26 Aligned_cols=140 Identities=14% Similarity=0.105 Sum_probs=74.9
Q ss_pred CCCCCCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccC--ccccceeeEEEeCCeEEEEEEcCCCCC
Q 002826 587 SSAGNGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRH--KNIVKVLGFFHSDESIFLIYEFLQMGS 664 (876)
Q Consensus 587 ~~~g~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~gs 664 (876)
..+.+|++.-.+|+....+|+.+++|...... ...+..|+.+++.+.. -.+.+++.+..+.+ ++|||++.+.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 44555554445778776557778787654321 1345567787777743 23556666643333 68999998777
Q ss_pred HHHHhhccC-------------------------CcCCHHHHHH--------------------HHHHHHHHHHHhh---
Q 002826 665 LGDLICRQD-------------------------FQLQWSIRLK--------------------IAIGVAQGLAYLH--- 696 (876)
Q Consensus 665 L~~~l~~~~-------------------------~~l~~~~~~~--------------------i~~~i~~~l~~LH--- 696 (876)
+.+++.... ..++...... ....+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 654432110 0111111000 0001111222221
Q ss_pred ccCCCCccccccccCceeeCCC----CCeEEccccchhh
Q 002826 697 KDYVPHLLHRNVKSKNILLDAD----FEPKLTDFALDRI 731 (876)
Q Consensus 697 ~~~~~~i~H~Dlkp~NIll~~~----~~~kl~DfGla~~ 731 (876)
......++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1123489999999999999874 6789999987654
No 432
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.01 E-value=0.0016 Score=70.82 Aligned_cols=136 Identities=15% Similarity=0.150 Sum_probs=80.2
Q ss_pred CCCCCceEEEEEEeC--------CCcEEEEEEEecCCccCHHHHHHHHHHHhhcc-CccccceeeEEEeCCeEEEEEEcC
Q 002826 590 GNGGPFGRVYILSLP--------SGELIAVKKLVNFGCQSSKTLKTEVKTLAKIR-HKNIVKVLGFFHSDESIFLIYEFL 660 (876)
Q Consensus 590 g~~g~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~ 660 (876)
..||....+|++..+ +++.|.+|+... .......+.+|..+++.+. +.-..++++++.+ .+||||+
T Consensus 58 lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i 132 (379)
T 3feg_A 58 VSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYI 132 (379)
T ss_dssp C-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECC
T ss_pred cCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEe
Confidence 345668899998775 357899998522 2234566778999999885 3333566666543 2899999
Q ss_pred CCCCHHHH-----------------hhcc----CCcCC--HHHHHHHHHHHHH-------------------HHHHhh--
Q 002826 661 QMGSLGDL-----------------ICRQ----DFQLQ--WSIRLKIAIGVAQ-------------------GLAYLH-- 696 (876)
Q Consensus 661 ~~gsL~~~-----------------l~~~----~~~l~--~~~~~~i~~~i~~-------------------~l~~LH-- 696 (876)
+|.++..- ++.. +.... +..+.++..++.. .+.+|.
T Consensus 133 ~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~ 212 (379)
T 3feg_A 133 PSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKL 212 (379)
T ss_dssp SEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHH
T ss_pred cCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHH
Confidence 98654310 1111 11122 3444444433321 122222
Q ss_pred --cc-CCCCccccccccCceeeCCC----CCeEEccccchh
Q 002826 697 --KD-YVPHLLHRNVKSKNILLDAD----FEPKLTDFALDR 730 (876)
Q Consensus 697 --~~-~~~~i~H~Dlkp~NIll~~~----~~~kl~DfGla~ 730 (876)
.. ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 213 L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 213 LESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 11 22479999999999999876 789999998764
No 433
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.96 E-value=0.0014 Score=73.06 Aligned_cols=69 Identities=16% Similarity=0.304 Sum_probs=46.6
Q ss_pred CCCCceEEEEEEeCC--------CcEEEEEEEecCCccCHHHHHHHHHHHhhccCccc-cceeeEEEeCCeEEEEEEcCC
Q 002826 591 NGGPFGRVYILSLPS--------GELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNI-VKVLGFFHSDESIFLIYEFLQ 661 (876)
Q Consensus 591 ~~g~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~ 661 (876)
+||....+|++..++ ++.|.+|+.... .....+..|..+++.+...++ .++++.+.+ .+|+||++
T Consensus 82 ~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l~ 155 (429)
T 1nw1_A 82 KGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIP 155 (429)
T ss_dssp CCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCC
T ss_pred CCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEeC
Confidence 355589999998753 578999987432 122566689999998854334 566665532 28999998
Q ss_pred CCCH
Q 002826 662 MGSL 665 (876)
Q Consensus 662 ~gsL 665 (876)
|.++
T Consensus 156 G~~l 159 (429)
T 1nw1_A 156 SRPL 159 (429)
T ss_dssp EEEC
T ss_pred Cccc
Confidence 7443
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.93 E-value=0.01 Score=63.29 Aligned_cols=135 Identities=14% Similarity=0.152 Sum_probs=80.0
Q ss_pred CCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCc--cccceeeE-----EEeCCeEEEEEEcCCCCCH
Q 002826 593 GPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHK--NIVKVLGF-----FHSDESIFLIYEFLQMGSL 665 (876)
Q Consensus 593 g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~-----~~~~~~~~lv~e~~~~gsL 665 (876)
|....||++...+|+.+++|+..... .....+..|..+++.+... .+++++.. ....+..++||++++|.++
T Consensus 36 g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G~~~ 114 (328)
T 1zyl_A 36 SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQF 114 (328)
T ss_dssp CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEEC
T ss_pred CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCCCCC
Confidence 44789999887778889999986332 3456778899998888522 24444443 2235677899999988543
Q ss_pred H-----H------H---hhcc--------CCcCCHHHH----HHH---------------HHHHHHHHHHhhcc----CC
Q 002826 666 G-----D------L---ICRQ--------DFQLQWSIR----LKI---------------AIGVAQGLAYLHKD----YV 700 (876)
Q Consensus 666 ~-----~------~---l~~~--------~~~l~~~~~----~~i---------------~~~i~~~l~~LH~~----~~ 700 (876)
. . . ++.. ....++... ..+ ...+...++.+.+. ..
T Consensus 115 ~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 194 (328)
T 1zyl_A 115 EADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFT 194 (328)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSC
T ss_pred CCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 1 0 0 1110 011222111 000 00111122222211 23
Q ss_pred CCccccccccCceeeCCCCCeEEccccchh
Q 002826 701 PHLLHRNVKSKNILLDADFEPKLTDFALDR 730 (876)
Q Consensus 701 ~~i~H~Dlkp~NIll~~~~~~kl~DfGla~ 730 (876)
..++|+|+++.||+++ + .+.++||+.+.
T Consensus 195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 195 VLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp CEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred eeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 4789999999999999 4 89999998664
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.90 E-value=0.0011 Score=60.10 Aligned_cols=55 Identities=22% Similarity=0.299 Sum_probs=43.3
Q ss_pred EEEccCCccc--cCCcCcccccccceEeccCCcCCCCCCcCCCCCCCcceeeCCCCccc
Q 002826 403 IINLSQNSIS--GQIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLT 459 (876)
Q Consensus 403 ~L~Ls~N~l~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 459 (876)
.++.+++.++ .++..+. ++|++|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5777888776 4443332 46889999999999777888899999999999999875
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.88 E-value=0.0024 Score=68.06 Aligned_cols=137 Identities=12% Similarity=0.117 Sum_probs=77.8
Q ss_pred CCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCcc--ccceeeE------EEeCCeEEEEEEcCCC
Q 002826 591 NGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKN--IVKVLGF------FHSDESIFLIYEFLQM 662 (876)
Q Consensus 591 ~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~------~~~~~~~~lv~e~~~~ 662 (876)
++|....+|+++..+| .+++|+.... .....+..|+.+++.+.... +.+++.. ....+..++||+|++|
T Consensus 31 ~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~G 107 (322)
T 2ppq_A 31 AEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLEG 107 (322)
T ss_dssp CC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCCC
T ss_pred CCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeCCC
Confidence 3455789999987655 6779987642 22345677888888884322 3333321 1234678999999998
Q ss_pred CCHHH--------------Hhhcc----CCc-------CCHHHHHH------------HHHHHHHHHHHhhcc----CCC
Q 002826 663 GSLGD--------------LICRQ----DFQ-------LQWSIRLK------------IAIGVAQGLAYLHKD----YVP 701 (876)
Q Consensus 663 gsL~~--------------~l~~~----~~~-------l~~~~~~~------------i~~~i~~~l~~LH~~----~~~ 701 (876)
..+.. .++.. ... ..|..... +...+.+.++++++. ...
T Consensus 108 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~ 187 (322)
T 2ppq_A 108 MWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLPA 187 (322)
T ss_dssp BCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCE
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccCCc
Confidence 65311 01111 000 11222110 001234445555432 124
Q ss_pred CccccccccCceeeCCCCCeEEccccchh
Q 002826 702 HLLHRNVKSKNILLDADFEPKLTDFALDR 730 (876)
Q Consensus 702 ~i~H~Dlkp~NIll~~~~~~kl~DfGla~ 730 (876)
+++|+|+.+.||+++++..+.++||+.+.
T Consensus 188 ~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 188 GVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp EEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 79999999999999877656899998653
No 437
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.83 E-value=0.0025 Score=67.35 Aligned_cols=67 Identities=9% Similarity=0.055 Sum_probs=40.7
Q ss_pred CCCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccCccc-cceeeEEEeCCeEEEEEEcC-CCCCH
Q 002826 591 NGGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNI-VKVLGFFHSDESIFLIYEFL-QMGSL 665 (876)
Q Consensus 591 ~~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~gsL 665 (876)
+||....+|++ +.+++|+..... .......+|+.+++.+...++ .+++++. .+.-++|+||+ +|.++
T Consensus 27 ~gG~tN~~~~~-----~~~vlR~~~~~~-~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 27 LGGLTNLVFRA-----GDLCLRIPGKGT-EEYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQTM 95 (301)
T ss_dssp ESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEEC
T ss_pred CCcccccccee-----eeEEEECCCCCc-cceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCccC
Confidence 45658999998 568888875421 111223568888888853333 3555443 33456899999 66444
No 438
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.83 E-value=0.0068 Score=65.11 Aligned_cols=67 Identities=10% Similarity=0.075 Sum_probs=44.6
Q ss_pred CCCceEEEEEEeCCCcEEEEEEEecCCccCHHHHHHHHHHHhhccC---ccccceeeE------EEeCCeEEEEEEcCCC
Q 002826 592 GGPFGRVYILSLPSGELIAVKKLVNFGCQSSKTLKTEVKTLAKIRH---KNIVKVLGF------FHSDESIFLIYEFLQM 662 (876)
Q Consensus 592 ~g~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~------~~~~~~~~lv~e~~~~ 662 (876)
+|....||++...+| .+++|+..... ...|+.+++.+.. |.+++.+.. ....+..++||+|++|
T Consensus 33 ~g~~N~vy~v~~~~g-~~vLK~~~~~~------~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 33 ADTNAFAYQADSESK-SYFIKLKYGYH------DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp SCSSCEEEEEECSSC-EEEEEEEECSS------CCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred CccccceEEEEeCCC-CEEEEEecCcc------chHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 333689999987777 89999876543 1456666766632 224555432 2345778999999998
Q ss_pred CCH
Q 002826 663 GSL 665 (876)
Q Consensus 663 gsL 665 (876)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 755
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.74 E-value=0.00024 Score=69.20 Aligned_cols=65 Identities=15% Similarity=0.198 Sum_probs=30.1
Q ss_pred cCCCCCcEEecccC-ccCCC----CCCccccccccccEEEeccccccCcCCc----ccccCCccceeeeeccccc
Q 002826 227 VGLQSLSILDLSQN-NLTGE----VPQSLGSSLLKLVSFDVSQNKLSGSFPN----GICKANGLVNLSLHKNFFN 292 (876)
Q Consensus 227 ~~l~~L~~L~Ls~N-~l~~~----ip~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~L~~N~i~ 292 (876)
.+-+.|+.|+|++| +|... +-..+. .-+.|+.|+|++|+|...... .+..-+.|+.|+|++|.|.
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~-~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAAC-NSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHT-TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHh-hCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 34456777777764 55411 111111 234556666666655532222 2223344555555555444
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.62 E-value=0.00013 Score=70.99 Aligned_cols=92 Identities=18% Similarity=0.191 Sum_probs=46.6
Q ss_pred cccccccCCCCCCeeecCCC-ccccc----cCccccCCCCCCcccCCCcccceeecCCcccccc----CCCccCCccccc
Q 002826 90 EISSSVCELSSLSNLNLADN-LFNQP----IPLHLSQCSSLETLNLSNNLIWVLDLSRNHIEGK----IPESIGSLVNLQ 160 (876)
Q Consensus 90 ~~~~~~~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~LdL~~n~l~~~----~p~~~~~l~~L~ 160 (876)
.+...+.+-+.|++|+|++| .|... +-..+..-+.|++|+|++| +|... +.+.+..-+.|+
T Consensus 32 ~l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n----------~igd~ga~alA~aL~~N~tL~ 101 (197)
T 1pgv_A 32 CINRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANT----------AISDSEARGLIELIETSPSLR 101 (197)
T ss_dssp HHHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTS----------CCBHHHHTTHHHHHHHCSSCC
T ss_pred HHHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCC----------CCChHHHHHHHHHHhcCCccC
Confidence 44555566778888888875 66532 2334444445555444433 33322 122233345667
Q ss_pred eecccccccCCCc----CccccCCCcceEEEccCC
Q 002826 161 VLNLGSNLLSGSV----PFVFGNFSELVVLDLSQN 191 (876)
Q Consensus 161 ~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N 191 (876)
+|+|++|.|+..- ..++..-+.|++|+|++|
T Consensus 102 ~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 102 VLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp EEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred eEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 7777777665321 222333344555555543
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.61 E-value=0.0027 Score=57.65 Aligned_cols=55 Identities=18% Similarity=0.268 Sum_probs=25.1
Q ss_pred EEecccCccC-CCCCCccccccccccEEEeccccccCcCCcccccCCccceeeeecccc
Q 002826 234 ILDLSQNNLT-GEVPQSLGSSLLKLVSFDVSQNKLSGSFPNGICKANGLVNLSLHKNFF 291 (876)
Q Consensus 234 ~L~Ls~N~l~-~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i 291 (876)
+++.++++++ ..+|..+. ++|++|+|++|+|+.+.+..|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp---~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP---VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC---TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC---cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555553 23444332 2344555555555544444444444444444444443
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.48 E-value=0.0091 Score=66.72 Aligned_cols=70 Identities=23% Similarity=0.141 Sum_probs=44.9
Q ss_pred CCCCceEEEEEEeCC-CcEEEEEEEecCCccCHHHHHHHHHHHhhccCccc-cceeeEEEeCCeEEEEEEcCCCCCH
Q 002826 591 NGGPFGRVYILSLPS-GELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKNI-VKVLGFFHSDESIFLIYEFLQMGSL 665 (876)
Q Consensus 591 ~~g~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~gsL 665 (876)
+||-...+|++...+ ++.+++|+..... .......+|..+++.+...++ .++++++. + ..||||++|.++
T Consensus 117 sgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 117 NGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp CC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred CCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 456689999998765 5788898874322 111123689999998864444 56677662 2 259999987544
No 443
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.37 E-value=0.025 Score=55.19 Aligned_cols=103 Identities=15% Similarity=0.075 Sum_probs=68.3
Q ss_pred CCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchhhccccccccccc
Q 002826 663 GSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDRIVGEAAFQSTMS 742 (876)
Q Consensus 663 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 742 (876)
-||.+++...+.++++.+++.++.|.+.+|.-.-.+. .-..+=+-|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc------------
Confidence 3899999988999999999999999999987762210 001223346889999999887774 1110
Q ss_pred cccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCC
Q 002826 743 SEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQA 783 (876)
Q Consensus 743 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p 783 (876)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0122356888753 3456788999999999998874443
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.20 E-value=0.0074 Score=65.68 Aligned_cols=69 Identities=13% Similarity=0.124 Sum_probs=42.3
Q ss_pred CCCceEEEEEEeCC---------CcEEEEEEEecCCccCHHHHHHHHHHHhhccCcc-ccceeeEEEeCCeEEEEEEcCC
Q 002826 592 GGPFGRVYILSLPS---------GELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKN-IVKVLGFFHSDESIFLIYEFLQ 661 (876)
Q Consensus 592 ~g~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~ 661 (876)
||....+|++...+ ++.+++|+..... ........|.++++.+...+ +.++++.. .+ ++||||++
T Consensus 43 ~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~v~e~i~ 117 (369)
T 3c5i_A 43 SGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF--NG--GRIEEWLY 117 (369)
T ss_dssp ---CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEEECCC
T ss_pred CcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec--CC--cEEEEEec
Confidence 55578999987654 2688888764321 11112467888888885434 44666543 22 68999999
Q ss_pred CCCH
Q 002826 662 MGSL 665 (876)
Q Consensus 662 ~gsL 665 (876)
|.++
T Consensus 118 G~~l 121 (369)
T 3c5i_A 118 GDPL 121 (369)
T ss_dssp SEEC
T ss_pred CCcC
Confidence 8543
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.97 E-value=0.022 Score=62.20 Aligned_cols=136 Identities=18% Similarity=0.188 Sum_probs=77.8
Q ss_pred CCCCceEEEEEEeCC--------CcEEEEEEEecCCcc-----------CH-------HHHHHHHHHHhhcc-Cccccce
Q 002826 591 NGGPFGRVYILSLPS--------GELIAVKKLVNFGCQ-----------SS-------KTLKTEVKTLAKIR-HKNIVKV 643 (876)
Q Consensus 591 ~~g~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~~-------~~~~~E~~~l~~l~-h~niv~~ 643 (876)
.||-...+|++..++ ++.|.+++.-..... ++ +....|..+++.+. +.-..++
T Consensus 61 ~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~Pkl 140 (401)
T 3f2s_A 61 RGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGPKL 140 (401)
T ss_dssp ECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSCCE
T ss_pred CCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCCeE
Confidence 456688999987754 367888886432110 11 12235888888885 4345566
Q ss_pred eeEEEeCCeEEEEEEcCCCCCHHH--H---------------hhcc----CCcCC--HHHHHHHHHHHH-----------
Q 002826 644 LGFFHSDESIFLIYEFLQMGSLGD--L---------------ICRQ----DFQLQ--WSIRLKIAIGVA----------- 689 (876)
Q Consensus 644 ~~~~~~~~~~~lv~e~~~~gsL~~--~---------------l~~~----~~~l~--~~~~~~i~~~i~----------- 689 (876)
++++.. . +|+||++|.+|.. + ++.. ..... +..+.++..++.
T Consensus 141 ~~~~~~--G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~ 216 (401)
T 3f2s_A 141 YGIFPQ--G--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESRIK 216 (401)
T ss_dssp EEEETT--E--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHHHH
T ss_pred EEEeCC--C--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhhhh
Confidence 766542 2 8999999755421 1 1111 11122 223333332221
Q ss_pred -----------HHH----HHhhcc-CCCCccccccccCceeeCCC------CCeEEccccchh
Q 002826 690 -----------QGL----AYLHKD-YVPHLLHRNVKSKNILLDAD------FEPKLTDFALDR 730 (876)
Q Consensus 690 -----------~~l----~~LH~~-~~~~i~H~Dlkp~NIll~~~------~~~kl~DfGla~ 730 (876)
.-+ ++|... ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 217 ~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 217 KLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 222221 22478999999999999876 789999997653
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.76 E-value=0.012 Score=64.87 Aligned_cols=70 Identities=17% Similarity=0.184 Sum_probs=45.6
Q ss_pred CCCCceEEEEEEeCC--------CcEEEEEEEecCCccCHHHHHHHHHHHhhccCcc-ccceeeEEEeCCeEEEEEEcCC
Q 002826 591 NGGPFGRVYILSLPS--------GELIAVKKLVNFGCQSSKTLKTEVKTLAKIRHKN-IVKVLGFFHSDESIFLIYEFLQ 661 (876)
Q Consensus 591 ~~g~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~ 661 (876)
.||....+|++...+ ++.|.+|+.... ........+|..+++.+...+ ..++++.+ .+ +.||||++
T Consensus 79 sGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~-t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~~I~efI~ 153 (424)
T 3mes_A 79 FSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKH-VGKFYDSKVELDVFRYLSNINIAPNIIADF--PE--GRIEEFID 153 (424)
T ss_dssp CCCSSSEEEEEEECCC-----CCCSEEEEEECCCC-C-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEEECCC
T ss_pred CCCcccceEEEEeCCCcccccCCCCeEEEEECCCC-cchhcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--CEEEEEeC
Confidence 466688999987753 678999886432 222223467888888885323 44555533 22 68999999
Q ss_pred CCCH
Q 002826 662 MGSL 665 (876)
Q Consensus 662 ~gsL 665 (876)
|.++
T Consensus 154 G~~l 157 (424)
T 3mes_A 154 GEPL 157 (424)
T ss_dssp SEEC
T ss_pred CccC
Confidence 8654
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.86 E-value=0.2 Score=54.87 Aligned_cols=30 Identities=27% Similarity=0.379 Sum_probs=24.8
Q ss_pred CccccccccCceee------CCCCCeEEccccchhh
Q 002826 702 HLLHRNVKSKNILL------DADFEPKLTDFALDRI 731 (876)
Q Consensus 702 ~i~H~Dlkp~NIll------~~~~~~kl~DfGla~~ 731 (876)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46899999999999 4567799999987653
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=80.81 E-value=4.2 Score=39.69 Aligned_cols=82 Identities=15% Similarity=0.141 Sum_probs=62.0
Q ss_pred cCccccceeeEEEeCCeEEEEEEcCCCC-CHHHHhhccCCcCCHHHHHHHHHHHHHHHH-HhhccCCCCccccccccCce
Q 002826 636 RHKNIVKVLGFFHSDESIFLIYEFLQMG-SLGDLICRQDFQLQWSIRLKIAIGVAQGLA-YLHKDYVPHLLHRNVKSKNI 713 (876)
Q Consensus 636 ~h~niv~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~~i~~~l~-~LH~~~~~~i~H~Dlkp~NI 713 (876)
.||+. -..+-.+++.+.+.++.-+++ +.. .+ ..++...+++++..|+.... +++.. .|--+.|+||
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i----~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AI----RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HH----HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HH----HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceE
Confidence 57777 444556677888888865443 333 33 24778899999999988777 67665 7888999999
Q ss_pred eeCCCCCeEEccccch
Q 002826 714 LLDADFEPKLTDFALD 729 (876)
Q Consensus 714 ll~~~~~~kl~DfGla 729 (876)
+++.++.+++.-.|+-
T Consensus 116 ~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 116 MFNRALEPFFLHVGVK 131 (219)
T ss_dssp EECTTCCEEESCCEET
T ss_pred EEeCCCcEEEEEcCCc
Confidence 9999999999988764
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=79.27 E-value=3.1 Score=40.44 Aligned_cols=114 Identities=9% Similarity=0.104 Sum_probs=77.5
Q ss_pred cCccccceeeEEEeCCeEEEEEEcCCC-CCHHHHhhccCCcCCHHHHHHHHHHHHHHHHHhhccCCCCccccccccCcee
Q 002826 636 RHKNIVKVLGFFHSDESIFLIYEFLQM-GSLGDLICRQDFQLQWSIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNIL 714 (876)
Q Consensus 636 ~h~niv~~~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlkp~NIl 714 (876)
.||+.+.. .+-.+.+.+.+.++.-+. -+... + ...+...+++++..|+....+++.. +|--+.|+|++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i----k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I----KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G----GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H----HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEE
Confidence 57888766 455666777676665432 22222 2 2477889999999999988777766 78899999999
Q ss_pred eCCCCCeEEccccchhhccccccccccccccccccccCccccCCCCCCCccchHHHHHHHHHHHhCCCCC
Q 002826 715 LDADFEPKLTDFALDRIVGEAAFQSTMSSEYALSCYNAPEYGYSKKATAQMDAYSFGVVLLELITGRQAE 784 (876)
Q Consensus 715 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGv~l~elltg~~p~ 784 (876)
++.++.+++.-.|+...+. |. ..++..=.-.+=+++..+++++..|
T Consensus 112 f~~~~~p~i~~RGik~~l~-------------------P~-----~~~ee~fL~qyKAliiall~~K~~F 157 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVVD-------------------PL-----PVSEAEFLTRYKALVICAFNEKQSF 157 (215)
T ss_dssp ECTTSCEEESCCEETTTBS-------------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCH
T ss_pred EcCCCCEEEEEccCccCCC-------------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCH
Confidence 9999999999877643221 11 1111122334677888888988755
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=50.91 E-value=4.7 Score=28.09 Aligned_cols=14 Identities=7% Similarity=0.000 Sum_probs=5.7
Q ss_pred HHHhheeeEEEeec
Q 002826 542 MMVAAGFFVFHRYS 555 (876)
Q Consensus 542 ~~~~~~~~~~~r~~ 555 (876)
+++++.+++++|++
T Consensus 26 ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 26 VVALGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhH
Confidence 33333344444443
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=48.66 E-value=36 Score=28.39 Aligned_cols=44 Identities=14% Similarity=0.220 Sum_probs=19.9
Q ss_pred ccCcCCcccccCCccceeeeecccccccCCCCCccccccceeecc
Q 002826 267 LSGSFPNGICKANGLVNLSLHKNFFNGSIPGSINECLNLERFQVQ 311 (876)
Q Consensus 267 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 311 (876)
++.+...+|.++++|+.+.+..+ ++.+...+|.+|.+|+.+.+.
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 33344444555555555554443 233444444444444444443
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=48.33 E-value=4.3 Score=28.19 Aligned_cols=7 Identities=14% Similarity=0.102 Sum_probs=2.7
Q ss_pred eeEEEee
Q 002826 548 FFVFHRY 554 (876)
Q Consensus 548 ~~~~~r~ 554 (876)
+++++|+
T Consensus 32 ~~~~RRR 38 (44)
T 2jwa_A 32 GILIKRR 38 (44)
T ss_dssp HHHHHHH
T ss_pred Hhheehh
Confidence 3333443
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=48.18 E-value=2.7 Score=46.71 Aligned_cols=55 Identities=7% Similarity=-0.077 Sum_probs=15.0
Q ss_pred ceEEEEEEeCC-CcEEEE------EEEecCC--ccCHHHHHHHHHHHhhccCccccceeeEEEe
Q 002826 595 FGRVYILSLPS-GELIAV------KKLVNFG--CQSSKTLKTEVKTLAKIRHKNIVKVLGFFHS 649 (876)
Q Consensus 595 ~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 649 (876)
||.||+|.+.. ..+||+ |...... .+....+.+|..+++..+|||+++.+++...
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 99999998754 467888 6654321 1223457788889999999999999987654
No 454
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=45.01 E-value=5.6 Score=27.65 Aligned_cols=8 Identities=13% Similarity=-0.214 Sum_probs=3.2
Q ss_pred eeeEEEee
Q 002826 547 GFFVFHRY 554 (876)
Q Consensus 547 ~~~~~~r~ 554 (876)
.+++++|+
T Consensus 30 ~~~~~RRR 37 (44)
T 2l2t_A 30 FAVYVRRK 37 (44)
T ss_dssp HHHHHHTT
T ss_pred HHHHhhhh
Confidence 33444443
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=44.51 E-value=44 Score=27.87 Aligned_cols=43 Identities=9% Similarity=0.019 Sum_probs=19.5
Q ss_pred ccCCCCCccccccceeecccccCCCCCCcccCCCCcccEEEecC
Q 002826 293 GSIPGSINECLNLERFQVQDNGFSGDFPDKLWSLPRIKLIRAES 336 (876)
Q Consensus 293 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 336 (876)
.+...+|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 10 ~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 10 GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 334444555555555544433 3334444444455555444443
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=42.31 E-value=9.1 Score=25.72 Aligned_cols=9 Identities=11% Similarity=0.445 Sum_probs=3.5
Q ss_pred HHHHHHHHH
Q 002826 533 ISLAVAVGI 541 (876)
Q Consensus 533 i~~~v~~~~ 541 (876)
+++++.+++
T Consensus 16 iVvG~v~gv 24 (38)
T 2k1k_A 16 VIFGLLLGA 24 (38)
T ss_dssp HHHHHHHHH
T ss_pred eehHHHHHH
Confidence 333443333
No 457
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=33.89 E-value=3.2e+02 Score=30.85 Aligned_cols=81 Identities=11% Similarity=0.066 Sum_probs=48.5
Q ss_pred ceeeEEEeCCeEEEEEEcCCCCCHHHHhhccC----------C------cCCHHHHHHHHHHHHH--HHHHhhccCCCCc
Q 002826 642 KVLGFFHSDESIFLIYEFLQMGSLGDLICRQD----------F------QLQWSIRLKIAIGVAQ--GLAYLHKDYVPHL 703 (876)
Q Consensus 642 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~------~l~~~~~~~i~~~i~~--~l~~LH~~~~~~i 703 (876)
+.|.+.......-+ .|++++.++.+.+.+.+ . ...+..+..++..+|. .+.|+=..
T Consensus 403 ~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi----- 476 (614)
T 3ls8_A 403 TPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV----- 476 (614)
T ss_dssp CCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred eccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec-----
Confidence 34444444444433 47777655555543211 0 1224555556655542 34555433
Q ss_pred cccccccCceeeCCCCCeEEccccchh
Q 002826 704 LHRNVKSKNILLDADFEPKLTDFALDR 730 (876)
Q Consensus 704 ~H~Dlkp~NIll~~~~~~kl~DfGla~ 730 (876)
+|=.++|||++.+|.+.=+|||.+-
T Consensus 477 --gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 --GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5778999999999999999999863
No 458
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=32.61 E-value=2.9e+02 Score=31.87 Aligned_cols=45 Identities=18% Similarity=0.084 Sum_probs=31.5
Q ss_pred HHHHHHHHHHH--HHHHHhhccCCCCccccccccCceeeCCCCCeEEccccchh
Q 002826 679 SIRLKIAIGVA--QGLAYLHKDYVPHLLHRNVKSKNILLDADFEPKLTDFALDR 730 (876)
Q Consensus 679 ~~~~~i~~~i~--~~l~~LH~~~~~~i~H~Dlkp~NIll~~~~~~kl~DfGla~ 730 (876)
..+..++..+| ..+.|+=. =+|=.++|||++.+|.+.=+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILG-------lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLG-------VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-------CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHcc-------CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 34455555544 23444433 26888999999999999999999864
No 459
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=24.39 E-value=14 Score=27.81 Aligned_cols=14 Identities=29% Similarity=0.544 Sum_probs=5.8
Q ss_pred HHHHHHHHHhheee
Q 002826 536 AVAVGIMMVAAGFF 549 (876)
Q Consensus 536 ~v~~~~~~~~~~~~ 549 (876)
+++..++++.+++|
T Consensus 16 g~~~lll~~glcI~ 29 (70)
T 2klu_A 16 GVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333344444444
Done!