Query 002827
Match_columns 876
No_of_seqs 309 out of 784
Neff 4.8
Searched_HMMs 46136
Date Thu Mar 28 11:35:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002827.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002827hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3724 Negative regulator of 100.0 2E-111 5E-116 962.4 40.2 694 14-796 20-768 (973)
2 PF07819 PGAP1: PGAP1-like pro 100.0 9.5E-54 2.1E-58 444.6 22.2 225 80-356 1-225 (225)
3 PF06028 DUF915: Alpha/beta hy 99.3 3.2E-11 6.8E-16 129.0 14.9 225 81-354 9-253 (255)
4 PLN02824 hydrolase, alpha/beta 99.1 4.3E-10 9.2E-15 119.2 12.7 110 82-244 28-137 (294)
5 PRK00870 haloalkane dehalogena 99.1 1.2E-09 2.6E-14 116.6 14.3 130 35-242 13-148 (302)
6 PRK11126 2-succinyl-6-hydroxy- 99.0 1.4E-09 2.9E-14 110.9 12.2 101 83-244 2-102 (242)
7 TIGR02240 PHA_depoly_arom poly 99.0 1.2E-09 2.5E-14 115.1 11.7 100 83-245 25-127 (276)
8 PRK03592 haloalkane dehalogena 99.0 1.4E-09 3E-14 115.3 12.1 99 82-243 26-127 (295)
9 PF05057 DUF676: Putative seri 99.0 1.8E-09 3.9E-14 112.3 9.9 46 205-250 77-131 (217)
10 PF12697 Abhydrolase_6: Alpha/ 99.0 3.8E-09 8.3E-14 102.5 11.2 97 86-245 1-102 (228)
11 PRK10673 acyl-CoA esterase; Pr 99.0 4.8E-09 1E-13 107.5 12.2 101 81-242 14-114 (255)
12 PRK10349 carboxylesterase BioH 98.9 2.6E-09 5.7E-14 110.6 9.6 97 82-243 11-108 (256)
13 PLN02679 hydrolase, alpha/beta 98.9 7.9E-09 1.7E-13 114.4 12.0 101 82-244 87-191 (360)
14 PLN02965 Probable pheophorbida 98.9 9.6E-09 2.1E-13 107.1 10.6 99 84-243 4-106 (255)
15 PLN02211 methyl indole-3-aceta 98.9 1.3E-08 2.7E-13 108.7 11.2 101 81-242 16-120 (273)
16 PLN03087 BODYGUARD 1 domain co 98.8 2.7E-08 5.9E-13 115.2 14.5 107 82-246 200-311 (481)
17 PLN02578 hydrolase 98.8 2.4E-08 5.1E-13 110.2 13.1 100 81-243 84-186 (354)
18 TIGR03695 menH_SHCHC 2-succiny 98.8 2.7E-08 6E-13 98.0 12.2 99 83-243 1-104 (251)
19 TIGR03056 bchO_mg_che_rel puta 98.8 3.1E-08 6.6E-13 102.0 13.0 101 82-245 27-131 (278)
20 PRK10749 lysophospholipase L2; 98.8 2.9E-08 6.3E-13 108.4 12.9 104 83-244 54-166 (330)
21 TIGR01738 bioH putative pimelo 98.8 2E-08 4.2E-13 99.5 9.8 97 82-243 2-99 (245)
22 TIGR03611 RutD pyrimidine util 98.8 5.4E-08 1.2E-12 97.8 12.8 98 82-242 12-113 (257)
23 KOG2382 Predicted alpha/beta h 98.8 1.8E-08 3.9E-13 110.3 9.0 108 81-244 50-160 (315)
24 TIGR01836 PHA_synth_III_C poly 98.7 4.3E-08 9.3E-13 107.9 11.1 124 56-246 44-173 (350)
25 PRK03204 haloalkane dehalogena 98.7 5.8E-08 1.2E-12 103.9 10.7 100 82-244 33-136 (286)
26 PLN03084 alpha/beta hydrolase 98.7 1.7E-07 3.8E-12 105.7 14.8 101 82-245 126-233 (383)
27 TIGR01250 pro_imino_pep_2 prol 98.7 1.3E-07 2.8E-12 96.3 12.1 36 206-244 96-131 (288)
28 PHA02857 monoglyceride lipase; 98.7 1.1E-07 2.3E-12 99.7 11.8 106 84-244 25-132 (276)
29 PF12695 Abhydrolase_5: Alpha/ 98.7 2E-07 4.4E-12 87.4 11.8 93 85-242 1-93 (145)
30 TIGR03343 biphenyl_bphD 2-hydr 98.7 1.2E-07 2.5E-12 99.0 11.1 39 205-246 100-138 (282)
31 PLN02385 hydrolase; alpha/beta 98.7 1E-07 2.2E-12 104.6 11.2 104 84-243 88-196 (349)
32 TIGR02427 protocat_pcaD 3-oxoa 98.7 7.3E-08 1.6E-12 95.6 9.0 100 83-245 13-115 (251)
33 PRK07868 acyl-CoA synthetase; 98.7 1E-07 2.3E-12 118.8 12.0 126 56-245 45-178 (994)
34 PLN02652 hydrolase; alpha/beta 98.7 1.9E-07 4.1E-12 105.7 13.0 104 84-243 137-244 (395)
35 PF01674 Lipase_2: Lipase (cla 98.6 9.1E-08 2E-12 100.6 9.5 113 84-250 2-129 (219)
36 PLN02298 hydrolase, alpha/beta 98.6 2.2E-07 4.8E-12 100.7 12.2 80 148-245 87-170 (330)
37 PRK06489 hypothetical protein; 98.6 8.8E-08 1.9E-12 105.9 9.2 35 206-243 153-188 (360)
38 COG4814 Uncharacterized protei 98.6 1.9E-07 4.1E-12 99.4 11.2 221 82-354 44-285 (288)
39 PRK08775 homoserine O-acetyltr 98.6 1.1E-07 2.4E-12 104.2 8.3 74 148-245 99-174 (343)
40 PRK14875 acetoin dehydrogenase 98.6 3.8E-07 8.3E-12 99.3 12.1 103 82-247 130-235 (371)
41 PRK05855 short chain dehydroge 98.5 5.2E-07 1.1E-11 103.8 12.6 103 82-244 24-131 (582)
42 KOG1454 Predicted hydrolase/ac 98.5 1.4E-07 2.9E-12 104.5 7.5 108 81-245 56-167 (326)
43 PLN02894 hydrolase, alpha/beta 98.5 6.4E-07 1.4E-11 101.3 13.0 36 205-243 175-210 (402)
44 PRK10985 putative hydrolase; P 98.5 3.4E-07 7.3E-12 100.0 9.9 39 206-246 131-170 (324)
45 TIGR03101 hydr2_PEP hydrolase, 98.5 1.2E-06 2.6E-11 94.6 12.7 100 84-242 26-132 (266)
46 TIGR01838 PHA_synth_I poly(R)- 98.5 4.8E-07 1E-11 106.1 10.2 125 57-245 171-303 (532)
47 TIGR03100 hydr1_PEP hydrolase, 98.4 2.8E-06 6E-11 90.9 14.3 106 82-245 25-135 (274)
48 TIGR01392 homoserO_Ac_trn homo 98.4 4.3E-07 9.3E-12 100.0 8.2 57 166-246 107-164 (351)
49 PLN02980 2-oxoglutarate decarb 98.4 1.1E-06 2.3E-11 115.0 13.1 109 82-242 1370-1478(1655)
50 PLN02872 triacylglycerol lipas 98.4 2.5E-07 5.3E-12 104.9 4.8 136 56-241 51-194 (395)
51 cd00707 Pancreat_lipase_like P 98.4 2.4E-06 5.2E-11 92.2 12.0 107 81-242 34-145 (275)
52 TIGR03230 lipo_lipase lipoprot 98.4 3.3E-06 7.1E-11 97.1 13.4 108 81-242 39-152 (442)
53 PRK11071 esterase YqiA; Provis 98.4 2.6E-06 5.7E-11 86.9 11.3 89 84-243 2-92 (190)
54 COG2267 PldB Lysophospholipase 98.3 3.4E-06 7.4E-11 92.2 11.4 102 84-241 35-139 (298)
55 PLN02511 hydrolase 98.3 2.4E-06 5.3E-11 96.2 10.6 56 171-245 155-211 (388)
56 PRK00175 metX homoserine O-ace 98.3 1.9E-06 4E-11 96.5 8.9 56 166-245 127-183 (379)
57 PRK10566 esterase; Provisional 98.3 6.2E-06 1.3E-10 85.2 11.7 27 82-108 26-52 (249)
58 COG1075 LipA Predicted acetylt 98.3 1.4E-06 3E-11 96.8 7.4 44 206-250 127-170 (336)
59 PLN02733 phosphatidylcholine-s 98.3 2.7E-06 5.8E-11 97.9 9.9 65 169-250 142-207 (440)
60 COG1647 Esterase/lipase [Gener 98.3 4.8E-06 1.1E-10 87.5 10.6 106 82-246 14-120 (243)
61 TIGR01249 pro_imino_pep_1 prol 98.2 4.3E-06 9.4E-11 90.2 9.5 37 206-245 95-131 (306)
62 TIGR01840 esterase_phb esteras 98.2 2.1E-05 4.6E-10 80.7 13.4 57 171-245 75-131 (212)
63 TIGR01839 PHA_synth_II poly(R) 98.1 1.4E-05 3E-10 94.0 11.6 81 147-246 246-330 (560)
64 COG0596 MhpC Predicted hydrola 98.1 1.8E-05 3.9E-10 76.6 10.5 103 83-245 21-124 (282)
65 KOG4409 Predicted hydrolase/ac 98.1 7E-06 1.5E-10 91.1 8.3 34 205-241 159-192 (365)
66 KOG4178 Soluble epoxide hydrol 98.1 2E-05 4.3E-10 87.0 11.2 109 81-247 42-151 (322)
67 PRK11460 putative hydrolase; P 98.1 4E-05 8.6E-10 80.5 12.9 120 83-242 16-136 (232)
68 PF02450 LCAT: Lecithin:choles 98.1 1.1E-05 2.3E-10 91.5 9.0 47 205-251 118-167 (389)
69 PRK07581 hypothetical protein; 98.1 5.7E-06 1.2E-10 90.2 6.5 38 205-245 122-160 (339)
70 PLN00021 chlorophyllase 98.1 1.9E-05 4.2E-10 87.1 10.6 38 204-241 124-163 (313)
71 KOG2564 Predicted acetyltransf 98.0 1.7E-05 3.7E-10 85.9 9.4 107 82-241 73-179 (343)
72 PRK13604 luxD acyl transferase 98.0 4.6E-05 1E-09 84.1 13.0 31 206-241 108-138 (307)
73 TIGR01607 PST-A Plasmodium sub 98.0 2.5E-05 5.5E-10 86.1 10.4 40 205-244 141-185 (332)
74 PLN02606 palmitoyl-protein thi 98.0 4.3E-05 9.4E-10 84.0 10.9 59 167-246 75-134 (306)
75 PRK05077 frsA fermentation/res 97.9 5.5E-05 1.2E-09 86.3 11.5 39 204-245 263-301 (414)
76 PF02089 Palm_thioest: Palmito 97.9 3.9E-05 8.6E-10 83.5 9.2 107 82-246 4-118 (279)
77 PF00975 Thioesterase: Thioest 97.8 6.1E-05 1.3E-09 76.9 9.1 102 85-244 2-104 (229)
78 KOG2541 Palmitoyl protein thio 97.8 8.9E-05 1.9E-09 80.0 10.0 105 83-247 23-131 (296)
79 PF10230 DUF2305: Uncharacteri 97.8 0.00018 4E-09 77.5 12.2 115 86-241 5-119 (266)
80 PF00561 Abhydrolase_1: alpha/ 97.8 8.4E-05 1.8E-09 73.9 8.9 72 149-244 1-79 (230)
81 TIGR02821 fghA_ester_D S-formy 97.8 0.00019 4E-09 77.0 11.9 35 205-242 137-171 (275)
82 PLN02633 palmitoyl protein thi 97.8 0.00015 3.2E-09 80.0 10.8 60 166-246 73-133 (314)
83 PLN02442 S-formylglutathione h 97.7 0.00053 1.1E-08 74.2 14.2 37 205-244 142-178 (283)
84 TIGR03502 lipase_Pla1_cef extr 97.7 0.00015 3.2E-09 88.6 10.6 25 84-108 450-474 (792)
85 KOG1455 Lysophospholipase [Lip 97.6 0.00021 4.5E-09 78.5 9.4 101 86-241 57-161 (313)
86 KOG1552 Predicted alpha/beta h 97.4 0.0013 2.8E-08 70.9 11.1 160 148-356 88-252 (258)
87 PRK10162 acetyl esterase; Prov 97.2 0.0029 6.3E-08 69.6 12.0 106 84-242 82-193 (318)
88 PRK10252 entF enterobactin syn 97.0 0.002 4.4E-08 82.2 9.8 101 82-242 1067-1169(1296)
89 PF07859 Abhydrolase_3: alpha/ 97.0 0.0036 7.8E-08 63.3 9.4 101 86-242 1-108 (211)
90 PF05990 DUF900: Alpha/beta hy 96.9 0.0068 1.5E-07 64.4 11.4 37 205-241 92-134 (233)
91 PF00151 Lipase: Lipase; Inte 96.9 0.0044 9.6E-08 69.3 10.0 81 148-241 104-184 (331)
92 cd00741 Lipase Lipase. Lipase 96.8 0.0031 6.7E-08 61.7 7.2 42 205-246 27-69 (153)
93 COG3319 Thioesterase domains o 96.8 0.0047 1E-07 67.0 9.1 104 84-245 1-104 (257)
94 PF05728 UPF0227: Uncharacteri 96.8 0.0028 6E-08 65.6 6.8 20 206-225 59-78 (187)
95 PF10503 Esterase_phd: Esteras 96.7 0.0096 2.1E-07 63.2 10.7 54 171-243 77-131 (220)
96 PF02230 Abhydrolase_2: Phosph 96.7 0.007 1.5E-07 62.5 9.4 74 150-242 65-138 (216)
97 PRK06765 homoserine O-acetyltr 96.5 0.0045 9.8E-08 70.5 6.3 58 166-247 141-199 (389)
98 PF08538 DUF1749: Protein of u 96.5 0.018 3.9E-07 63.9 10.7 106 85-241 35-145 (303)
99 PLN02517 phosphatidylcholine-s 96.4 0.0023 5E-08 75.9 3.5 46 205-250 212-269 (642)
100 TIGR01849 PHB_depoly_PhaZ poly 96.3 0.035 7.5E-07 64.0 12.1 124 56-246 82-210 (406)
101 KOG3724 Negative regulator of 96.3 0.0038 8.1E-08 75.5 4.4 111 644-755 618-728 (973)
102 PF06821 Ser_hydrolase: Serine 96.2 0.0089 1.9E-07 60.8 6.2 38 206-245 55-92 (171)
103 KOG4391 Predicted alpha/beta h 96.2 0.038 8.2E-07 58.9 10.8 193 82-357 77-283 (300)
104 COG3243 PhaC Poly(3-hydroxyalk 96.1 0.01 2.2E-07 68.0 6.5 81 147-246 138-219 (445)
105 PF01764 Lipase_3: Lipase (cla 96.1 0.032 6.9E-07 53.1 8.9 51 205-260 63-116 (140)
106 COG0400 Predicted esterase [Ge 95.9 0.04 8.6E-07 58.1 9.5 55 168-241 76-131 (207)
107 PF00326 Peptidase_S9: Prolyl 95.8 0.028 6E-07 57.4 7.9 80 147-245 13-100 (213)
108 PF06342 DUF1057: Alpha/beta h 95.8 0.07 1.5E-06 58.8 11.0 97 86-246 38-139 (297)
109 PF00756 Esterase: Putative es 95.7 0.11 2.4E-06 54.0 12.0 50 173-241 96-147 (251)
110 PF05677 DUF818: Chlamydia CHL 95.4 0.49 1.1E-05 53.5 16.2 64 168-245 191-256 (365)
111 KOG1838 Alpha/beta hydrolase [ 95.4 0.067 1.4E-06 61.5 9.7 54 174-245 183-236 (409)
112 TIGR00976 /NonD putative hydro 95.4 0.043 9.4E-07 65.0 8.5 56 169-243 76-131 (550)
113 KOG2029 Uncharacterized conser 95.4 0.014 3.1E-07 69.0 4.1 46 205-250 525-578 (697)
114 PF01738 DLH: Dienelactone hyd 95.2 0.16 3.5E-06 52.2 11.1 102 83-241 14-129 (218)
115 cd00519 Lipase_3 Lipase (class 95.1 0.051 1.1E-06 56.7 6.9 42 205-246 127-169 (229)
116 COG0429 Predicted hydrolase of 95.1 0.12 2.7E-06 57.9 10.1 39 205-245 147-186 (345)
117 KOG4627 Kynurenine formamidase 94.9 0.043 9.3E-07 58.1 5.6 99 84-241 68-169 (270)
118 KOG2624 Triglyceride lipase-ch 94.9 0.026 5.6E-07 64.9 4.4 49 175-241 147-196 (403)
119 smart00824 PKS_TE Thioesterase 94.7 0.1 2.2E-06 51.3 7.5 38 206-244 64-102 (212)
120 COG0412 Dienelactone hydrolase 94.4 0.89 1.9E-05 48.6 14.3 25 85-109 28-53 (236)
121 PRK10439 enterobactin/ferric e 94.3 0.67 1.4E-05 53.6 14.1 56 171-243 265-322 (411)
122 PLN00413 triacylglycerol lipas 94.2 0.11 2.5E-06 60.7 7.6 41 206-246 284-329 (479)
123 COG4782 Uncharacterized protei 94.2 0.17 3.7E-06 57.4 8.7 37 205-241 190-231 (377)
124 KOG2369 Lecithin:cholesterol a 94.2 0.027 5.8E-07 65.4 2.5 67 168-248 158-229 (473)
125 PF08840 BAAT_C: BAAT / Acyl-C 93.7 0.11 2.4E-06 54.4 5.7 54 173-245 4-57 (213)
126 PLN02408 phospholipase A1 93.6 0.12 2.7E-06 58.7 6.4 59 173-246 182-242 (365)
127 PLN02310 triacylglycerol lipas 93.4 0.13 2.9E-06 59.2 6.2 60 174-246 190-250 (405)
128 PF03403 PAF-AH_p_II: Platelet 93.4 0.071 1.5E-06 60.8 4.0 28 82-109 98-126 (379)
129 PF11187 DUF2974: Protein of u 93.3 0.23 5E-06 52.9 7.4 42 206-247 84-126 (224)
130 COG4099 Predicted peptidase [G 93.3 0.24 5.3E-06 55.0 7.7 59 166-242 244-302 (387)
131 PLN02571 triacylglycerol lipas 93.2 0.13 2.7E-06 59.5 5.7 58 174-246 209-276 (413)
132 COG0657 Aes Esterase/lipase [L 93.2 0.44 9.6E-06 51.9 9.7 62 148-225 110-171 (312)
133 PLN02753 triacylglycerol lipas 93.2 0.15 3.3E-06 60.3 6.3 61 174-246 292-360 (531)
134 PLN02454 triacylglycerol lipas 93.2 0.13 2.9E-06 59.3 5.7 58 175-247 212-273 (414)
135 COG3208 GrsT Predicted thioest 92.5 0.26 5.6E-06 53.3 6.4 38 205-242 73-110 (244)
136 PLN02162 triacylglycerol lipas 92.5 0.25 5.3E-06 57.9 6.7 52 205-261 277-333 (475)
137 PLN02802 triacylglycerol lipas 92.4 0.17 3.8E-06 59.6 5.4 59 173-246 312-372 (509)
138 PF12740 Chlorophyllase2: Chlo 92.4 1 2.2E-05 49.3 10.8 39 203-241 88-128 (259)
139 cd00312 Esterase_lipase Estera 92.3 1 2.2E-05 52.3 11.5 41 204-245 174-214 (493)
140 PLN03037 lipase class 3 family 91.9 0.27 5.8E-06 58.2 6.1 61 174-247 299-361 (525)
141 PLN02761 lipase class 3 family 91.9 0.24 5.2E-06 58.6 5.7 61 175-246 274-343 (527)
142 PF01083 Cutinase: Cutinase; 91.9 0.62 1.4E-05 47.8 8.1 46 205-250 80-128 (179)
143 PLN02324 triacylglycerol lipas 91.7 0.25 5.4E-06 57.2 5.4 59 174-247 198-267 (415)
144 PLN02719 triacylglycerol lipas 91.6 0.28 6.2E-06 57.9 5.9 62 174-247 278-347 (518)
145 COG3545 Predicted esterase of 91.6 0.35 7.5E-06 50.1 5.9 40 206-248 59-98 (181)
146 PLN02934 triacylglycerol lipas 91.6 0.5 1.1E-05 55.9 7.9 51 206-261 321-376 (515)
147 KOG4667 Predicted esterase [Li 90.8 0.96 2.1E-05 48.6 8.3 52 168-241 85-136 (269)
148 KOG2112 Lysophospholipase [Lip 90.5 1.4 3E-05 46.8 9.1 117 85-241 5-125 (206)
149 PF07224 Chlorophyllase: Chlor 90.3 1.3 2.8E-05 48.9 8.9 81 148-241 73-154 (307)
150 KOG4372 Predicted alpha/beta h 89.9 0.14 3.1E-06 58.7 1.4 42 205-246 149-196 (405)
151 COG3509 LpqC Poly(3-hydroxybut 89.4 2.3 5E-05 47.5 10.1 55 170-243 123-178 (312)
152 PF06500 DUF1100: Alpha/beta h 89.4 0.55 1.2E-05 54.4 5.7 38 204-245 259-297 (411)
153 PF06259 Abhydrolase_8: Alpha/ 88.4 0.57 1.2E-05 48.5 4.5 39 205-246 108-146 (177)
154 COG4188 Predicted dienelactone 88.4 1.3 2.7E-05 50.7 7.4 51 167-225 128-178 (365)
155 COG1506 DAP2 Dipeptidyl aminop 88.4 1.6 3.5E-05 52.9 8.9 36 203-242 470-505 (620)
156 KOG3975 Uncharacterized conser 86.7 3.5 7.7E-05 45.2 9.2 37 204-241 108-144 (301)
157 KOG4569 Predicted lipase [Lipi 84.5 2.5 5.4E-05 47.6 7.3 55 175-246 157-214 (336)
158 PF05277 DUF726: Protein of un 84.2 3.8 8.3E-05 46.7 8.5 41 206-246 220-262 (345)
159 COG3571 Predicted hydrolase of 84.2 1.6 3.4E-05 45.2 4.9 39 206-247 89-127 (213)
160 KOG3101 Esterase D [General fu 83.5 3.2 6.9E-05 44.7 7.0 25 203-227 138-163 (283)
161 COG2021 MET2 Homoserine acetyl 83.1 1.5 3.2E-05 50.2 4.7 43 205-250 145-188 (368)
162 PTZ00472 serine carboxypeptida 82.2 5.8 0.00013 46.7 9.3 44 168-225 147-190 (462)
163 COG2819 Predicted hydrolase of 82.2 2.6 5.6E-05 46.4 6.0 33 205-241 136-169 (264)
164 PF12048 DUF3530: Protein of u 81.8 12 0.00026 41.8 11.2 62 166-243 167-228 (310)
165 COG2272 PnbA Carboxylesterase 81.4 4.1 8.8E-05 48.3 7.5 40 204-244 178-217 (491)
166 PF05448 AXE1: Acetyl xylan es 81.0 3.8 8.3E-05 45.9 7.0 34 204-241 173-206 (320)
167 PLN02847 triacylglycerol lipas 77.8 2.9 6.3E-05 50.6 5.0 19 206-224 251-269 (633)
168 PF06057 VirJ: Bacterial virul 76.6 13 0.00028 39.3 8.7 41 205-245 67-108 (192)
169 PF11288 DUF3089: Protein of u 76.3 3.9 8.4E-05 43.5 5.0 35 175-225 80-114 (207)
170 KOG2984 Predicted hydrolase [G 74.9 3.5 7.7E-05 44.1 4.1 52 167-242 96-147 (277)
171 PF00135 COesterase: Carboxyle 73.9 12 0.00025 43.4 8.5 57 204-262 206-262 (535)
172 PF03959 FSH1: Serine hydrolas 72.9 13 0.00029 38.7 7.9 38 207-244 103-145 (212)
173 KOG1515 Arylacetamide deacetyl 72.6 24 0.00053 40.1 10.4 38 204-241 164-204 (336)
174 COG4947 Uncharacterized protei 72.1 12 0.00025 39.4 6.9 109 79-242 22-134 (227)
175 PRK10115 protease 2; Provision 67.4 49 0.0011 41.1 12.2 35 204-241 522-556 (686)
176 PF10340 DUF2424: Protein of u 64.6 21 0.00046 41.3 7.8 21 205-225 194-214 (374)
177 PF12146 Hydrolase_4: Putative 61.8 18 0.0004 32.4 5.4 24 85-108 18-41 (79)
178 PF11339 DUF3141: Protein of u 60.9 88 0.0019 38.0 12.0 64 163-245 113-176 (581)
179 PF12715 Abhydrolase_7: Abhydr 60.5 12 0.00026 43.3 5.0 35 203-241 223-257 (390)
180 PF04083 Abhydro_lipase: Parti 58.5 10 0.00022 33.1 3.0 40 57-99 20-59 (63)
181 KOG3847 Phospholipase A2 (plat 58.3 39 0.00085 38.6 8.2 28 82-109 116-144 (399)
182 PRK04940 hypothetical protein; 57.9 7.5 0.00016 40.6 2.5 20 206-225 60-79 (180)
183 PF11144 DUF2920: Protein of u 54.6 25 0.00055 41.0 6.3 56 171-242 162-217 (403)
184 KOG2183 Prolylcarboxypeptidase 51.5 19 0.0004 42.3 4.5 54 205-261 166-224 (492)
185 PF03583 LIP: Secretory lipase 50.7 61 0.0013 35.8 8.3 72 147-232 25-98 (290)
186 COG5153 CVT17 Putative lipase 49.1 18 0.0004 40.5 3.8 20 206-225 276-295 (425)
187 KOG4540 Putative lipase essent 49.1 18 0.0004 40.5 3.8 20 206-225 276-295 (425)
188 PF06441 EHN: Epoxide hydrolas 48.6 10 0.00022 36.6 1.7 23 80-102 89-111 (112)
189 KOG1516 Carboxylesterase and r 48.1 23 0.0005 41.9 4.8 77 151-247 159-235 (545)
190 PF08237 PE-PPE: PE-PPE domain 46.8 96 0.0021 33.3 8.8 40 205-245 47-90 (225)
191 PF05577 Peptidase_S28: Serine 44.5 71 0.0015 36.9 8.0 50 206-263 113-162 (434)
192 COG2382 Fes Enterochelin ester 40.6 43 0.00094 37.7 5.1 34 205-241 176-209 (299)
193 KOG3253 Predicted alpha/beta h 39.9 30 0.00066 42.3 4.0 70 163-247 220-289 (784)
194 KOG3967 Uncharacterized conser 39.4 61 0.0013 35.3 5.8 58 166-245 170-228 (297)
195 COG3150 Predicted esterase [Ge 37.5 1E+02 0.0022 32.5 6.8 20 206-225 59-78 (191)
196 COG0627 Predicted esterase [Ge 35.4 21 0.00045 40.4 1.7 31 207-241 153-184 (316)
197 KOG1202 Animal-type fatty acid 33.2 1.2E+02 0.0026 40.3 7.6 97 79-241 2119-2216(2376)
198 PF02129 Peptidase_S15: X-Pro 32.0 1.7E+02 0.0038 31.4 8.0 78 148-244 57-136 (272)
199 COG4757 Predicted alpha/beta h 31.9 40 0.00087 37.1 3.1 23 205-227 104-126 (281)
200 PF09752 DUF2048: Uncharacteri 31.8 91 0.002 35.9 6.0 45 205-253 174-218 (348)
201 PF03096 Ndr: Ndr family; Int 31.0 1.3E+02 0.0028 33.8 6.9 69 166-264 80-149 (283)
202 TIGR02816 pfaB_fam PfaB family 29.9 1.2E+02 0.0026 36.8 7.0 21 205-225 264-284 (538)
203 COG1770 PtrB Protease II [Amin 28.8 1.6E+02 0.0035 36.7 7.6 38 205-246 526-563 (682)
204 PRK05371 x-prolyl-dipeptidyl a 28.3 1.8E+02 0.0038 36.9 8.3 92 147-243 278-372 (767)
205 PRK15127 multidrug efflux syst 27.8 64 0.0014 42.0 4.5 44 734-796 879-924 (1049)
206 KOG4840 Predicted hydrolases o 27.5 88 0.0019 34.4 4.7 63 160-240 78-140 (299)
207 PRK10555 aminoglycoside/multid 27.3 86 0.0019 40.9 5.5 17 734-750 877-893 (1037)
208 COG2945 Predicted hydrolase of 26.7 1.5E+02 0.0033 31.9 6.1 53 173-245 86-138 (210)
209 COG3458 Acetyl esterase (deace 25.6 1.6E+02 0.0035 33.3 6.4 37 175-226 160-196 (321)
210 PF09991 DUF2232: Predicted me 25.3 4.5E+02 0.0097 28.1 9.7 91 730-840 166-258 (290)
211 PF04301 DUF452: Protein of un 24.3 1.1E+02 0.0024 32.9 4.7 34 207-244 58-91 (213)
212 PF15444 TMEM247: Transmembran 21.8 98 0.0021 32.6 3.6 23 819-841 195-217 (218)
213 KOG2931 Differentiation-relate 20.9 4.2E+02 0.009 30.4 8.4 54 205-267 121-176 (326)
No 1
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.3e-111 Score=962.37 Aligned_cols=694 Identities=34% Similarity=0.448 Sum_probs=582.0
Q ss_pred HHHHHHHHHHHHHhhcccCCCCeeeeeeccceeecCCCCC--CCCCCCceEEEeeeCCcccchHHhhhccCCCcEEEecC
Q 002827 14 VILALWIGIAALYSLLKPISNGCVMTYMYPTYIPISSTEG--ASSSARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPG 91 (876)
Q Consensus 14 ~~~~~~~~l~~l~~~~~~~~n~C~MtyMyPsY~~I~~~~~--~~~~~kY~LYlYrEg~~~~~~~~~~~~l~g~PVlFIHG 91 (876)
+.+++++++..|.+++++.+|+|.||||||+|.++-..+. ++.++||+||+||||+.+.+ .+..+++|+|||||||
T Consensus 20 liia~ll~l~ll~~f~g~~en~CsmtYMypsy~r~i~i~~r~t~~a~kY~LYLY~Egs~~~e--~~~lelsGIPVLFIPG 97 (973)
T KOG3724|consen 20 LIIAVLLGLGLLLHFLGHQENGCSMTYMYPSYYRFIEIPERLTPQADKYSLYLYREGSRWWE--RSTLELSGIPVLFIPG 97 (973)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceeEEEeccceeecCCcccccCCCCceEEEEecccccccc--cccccCCCceEEEecC
Confidence 3358888999999999999999999999999776655443 56899999999999986543 5667899999999999
Q ss_pred CcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCccchhhHHHH
Q 002827 92 NAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSAMDGQILEEH 171 (876)
Q Consensus 92 ~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA~~G~tL~dQ 171 (876)
|+|||||+||+|++.++-|++++.++ + +. .....++|||+||||||++|+||++|+||
T Consensus 98 NAGSyKQvRSiAS~a~n~y~~~~~e~-----t-------------~~----~d~~~~~DFFaVDFnEe~tAm~G~~l~dQ 155 (973)
T KOG3724|consen 98 NAGSYKQVRSIASVAQNAYQGGPFEK-----T-------------ED----RDNPFSFDFFAVDFNEEFTAMHGHILLDQ 155 (973)
T ss_pred CCCchHHHHHHHHHHhhhhcCCchhh-----h-------------hc----ccCccccceEEEcccchhhhhccHhHHHH
Confidence 99999999999999999998875432 1 11 11245789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCCCCCccc
Q 002827 172 AEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQSPPLAL 251 (876)
Q Consensus 172 Aeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~~pPvaf 251 (876)
|||||+||++|+++|++. ++...|+|++|+||||||||+|||+++++||+.++.|++|||++|||+.||+++
T Consensus 156 tEYV~dAIk~ILslYr~~--------~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~Pl~~ 227 (973)
T KOG3724|consen 156 TEYVNDAIKYILSLYRGE--------REYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAPPLPL 227 (973)
T ss_pred HHHHHHHHHHHHHHhhcc--------cccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCCCCCC
Confidence 999999999999999841 122367899999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHhccccCCCCCCCCccCCCCCcceEEEEecCCCCcccCCCCccccCCCCCCCceeeeecccCcee
Q 002827 252 QPSLGNYFARVNDEWRKGYEAHTTPTGHHVSNSRLSHVVVVSISAGYHDYQVRSKIESLDGIVPPTHGFMISSTGMKNVW 331 (876)
Q Consensus 252 D~~l~~~Y~~vn~~W~~~~~~~~s~~~~~~~~~~l~~V~lvSIaGG~~D~~VpsdlTsl~~lvP~t~g~tV~TTsIPgVW 331 (876)
|+.+.++|..+|++|++.+..+ +++.+++|.+|||+||++||+||++++++++++|.+||++++||+||+||
T Consensus 228 D~~l~~fy~~vnn~W~k~~~~~--------~~~~ls~V~vVSisGG~~Dy~V~se~ssl~~lv~~t~gfsv~sT~iP~vW 299 (973)
T KOG3724|consen 228 DRFLLRFYLLVNNYWNKLQNNN--------SDPLLSHVGVVSISGGIRDYQVPSELSSLRNLVPVTNGFSVFSTNIPVVW 299 (973)
T ss_pred cHHHHHHHHHHHHHHHHHHhcc--------ccchhcceEEEEEecCccccccCcchhhhccccccccceEEEecCCcccc
Confidence 9999999999999999987764 34668899999999999999999999999999999999999999999999
Q ss_pred ecCCCCceeecHHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHHHhccCCCcccccccccccCCCcccccccccccc
Q 002827 332 LSMEHQAILWCNQLVVQVSHTLLSLIDSRTGQPFLDTRQRLAMFSRMLRSGTPQSFNWMMQSHLFHQSTPASIKDAKDAA 411 (876)
Q Consensus 332 vs~DH~aIvWC~QLv~~iAr~Ll~lvd~~~~~~t~~~~~Rm~v~~~~l~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (876)
+++||+||+|||||+++++|.|++++|.+|.|.|++..+|..++.|.+.+|.++ +.|+.....++.. .+..++.
T Consensus 300 ~~iDHlAIlWCnql~~~vsR~l~s~ida~t~q~~~~~nqRl~vl~r~~i~~~ak-~~~~n~~i~~p~~-il~~~~~---- 373 (973)
T KOG3724|consen 300 LSIDHLAILWCNQLVRVVSRVLLSYIDALTTQTTRQLNQRLYVLDRDLISGRAK-FRHMNPVISKPIK-ILASEDL---- 373 (973)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhhccCccccchhHHHHHHHHHHHHhhHHH-hcCCCcccccHHH-hhhhcCC----
Confidence 999999999999999999999999999999999999999999999999999998 6777666665552 2222221
Q ss_pred CCCCCCCCcccccccccCCCcccccceeEEEeeccCCccceeeccccCCCCccEEEEEeccCCCCcceEEecCCCCCCCC
Q 002827 412 GSQAPSSSSCTVQWSAEGLDKDLYIQTATVTVLAMDGKRRWLDIQKLGANGKDHFIFVTNLAPCTGVRIHLWPEKGKSTT 491 (876)
Q Consensus 412 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~f~l~t~~~~~~~~~~~l~~~~~~~~~ 491 (876)
.|...|...-....++++ ++++.+.+.+++++.+..+.+++.|+.+.+++.+|++.+++.|.++.+..+
T Consensus 374 --------~~f~~~~~~~~~~~~~~q---~~vl~~~~~~~~l~~~~s~~~~~ehl~fq~~~~~~s~~~I~~c~ek~k~~s 442 (973)
T KOG3724|consen 374 --------TGFSVWETQFALLILYKQ---FEVLEKRHNAFPLNNMTSVIYDEEHLYFQNSLDSASNTWIYACLEKEKEVS 442 (973)
T ss_pred --------CceEehhhhhHHHHHHHH---HHHHHHhhhccccccccccccccceEEEeccccccccceeeeeccccchhh
Confidence 244556543333444444 667778888999988877777888988988999999999999998766556
Q ss_pred CCCCcccceeccccceecCCCCCCCCCCCCCCCCCCCCeeEEEeCccccCCccEEEEEeCCCCCCCCCCCCceeEEeeec
Q 002827 492 DLPGSKRILEVTSKMVHIPSRAAPRQLEPGSQTEQAPPSAVFQLGPEDMRGFRFLTISVAPTPTISGRPPPAVSMAVGQF 571 (876)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~P~s~~~~~~~~~s~~~~~~p~~~l~~~~~dl~~~~fi~i~~a~~p~~~~~~~~~~~~~v~~f 571 (876)
...+|....+++..|...+...++++.+|.+....++|.....+...|+..+++-+.. ||+.+.++.|.-...+++.++
T Consensus 443 ~l~~vd~~~~v~~~~s~~~~~~~~~~~~~~s~~~~avp~~~~~l~~~d~~~~r~~~~~-~~se~~~~~p~~~~~~~~l~~ 521 (973)
T KOG3724|consen 443 CLLAVDAPLSVDIQMSPPMLVQALRFYEPASSHLHAVPSGMISLSVYDAILFRKTTYY-APSETASLLPNLGFLFFVLSN 521 (973)
T ss_pred hhHhhhcccccccccccchhhhhhhhccccccceecCCcccceeeeeeeeeeeccccc-cchhhhccCCceeEEEEEeec
Confidence 6668888888888888888888888899999999999999999999999999999998 888888888888788888887
Q ss_pred cCCCccccccChHHHHhhccCCcceeccCCCCeEEEEEeeccccceeEEEEEEeec--cCccCCCCcccccCchhhhccc
Q 002827 572 FNPQEGEREFSSQSMLLSAYSPKDLFLKEDHPLVFNLTFAISLGLLPITLSLRTAS--CGIQNSGFANEEAGDIEHSRLC 649 (876)
Q Consensus 572 ~~~~~~~~~~s~~~ll~~~~~~~~~~l~~~~pl~~~i~~p~~~sLl~y~l~~~~~~--~~~~~~~f~~~~~~~~e~~~~~ 649 (876)
.++-+....++.+-+++...+.+.+..++|.+.+.++++-. +|+++|+++.++++ ||++ .+
T Consensus 522 ~s~~~~t~~~~sql~Lf~~g~~~qi~~k~di~k~~~~~~~~-tSllal~i~~s~e~s~~~i~-----------a~----- 584 (973)
T KOG3724|consen 522 VSDVDDTTTLPSQLELFMAGGWRQIFFKVDISKVSRFSFVK-TSLLALRIDKSYEGSYLGIS-----------AI----- 584 (973)
T ss_pred cccccCccccHhHHHHHHccchhhhheeccHhHheecccch-hheeEeecceeecccccccc-----------cc-----
Confidence 66555555555555555556777788889988887777665 59999999987754 4432 11
Q ss_pred cCcCCCceeEeeec---CCCeeEccCCCccceeccCCCccccCCCC-CceeEEEEeeCCCCcee--EEEEEeHHHHHHHH
Q 002827 650 KMRCFPPVALAWDP---TSGLYVFPNLFSETIIIDSSPALWSYSQG-SEKTIVVLLVDPHCSYK--TSVSVSVTAAASRF 723 (876)
Q Consensus 650 ~~~~F~P~~~qw~~---~~~~~~~pn~~~~~~i~~~ap~~~~~~~~-~~~l~l~~~~dp~c~~~--i~l~id~~~sl~~l 723 (876)
. |+. ++|||+ |+. +...|. +|+.+.+... ..++++.++-.|-.+.+ +.+...|..+++++
T Consensus 585 -----~-----~i~~~~e~k~hl--~i~-~k~~hv-~Pf~~l~~~e~~~s~~lk~~~~P~~s~~~~~~iql~~~~~ly~l 650 (973)
T KOG3724|consen 585 -----E-----LIMAEFEGKIHL--IIL-LKYLHV-APFAVLNISETLISLTLKLFGFPWFSLDVLIVIQLQYQPALYAL 650 (973)
T ss_pred -----c-----cccCCcccceee--eee-cccccc-cchhhhcccccceeeeEEEeeCchHhhhHHhhhchhhhHhhhhh
Confidence 1 333 379998 765 333343 6999887766 35699999999987774 45555599999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHhc-----------------------------------
Q 002827 724 LLLYGSQIAGLSVAVVFFALMRQAYAWDYYLPMPSMLTVVEYNLQ----------------------------------- 768 (876)
Q Consensus 724 ~lrYr~~i~~fpv~vv~lvl~~Qf~~y~~~~~f~sf~~aL~~~lr----------------------------------- 768 (876)
.||||+..|+||+..|++++..||++|..+..++|+++|++..+|
T Consensus 651 ~iryr~~lAsfpv~~i~l~~~~qf~~ph~~y~~~s~~sal~~~~rk~li~~~f~v~~ss~vv~~~l~~q~~~~v~dpvp~ 730 (973)
T KOG3724|consen 651 GIRYRGLLASFPVRQITLRLLVQFLVPHFLYLITSPLSALSGFTRKILITARFVVFPSSKVVTPPLPEQERVQVEDPVPI 730 (973)
T ss_pred hheeehhhhhcchhHHHHHHHHhhhhhccceeecchHHHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHhhcCCccc
Confidence 999999999999999999999999999999999999999984332
Q ss_pred ----------CChhHHHHHHHHHHHHHHHHHhhcCCCC
Q 002827 769 ----------MPFPFLLLAILPILVSLFHSFLMSQPFP 796 (876)
Q Consensus 769 ----------~~~p~l~~~~~~l~~~~~~~~~~~~~~~ 796 (876)
++.+|.++++.|...+.|++++|+|+.|
T Consensus 731 ~~p~~~~~~nmh~~f~ll~v~~wf~s~~~~l~~v~~v~ 768 (973)
T KOG3724|consen 731 QLPNNRQRYNMHNRFRLLAVLPWFSSLFYSLLMVQPVP 768 (973)
T ss_pred ccchhHHhhcccchhhHHHHHHHHHHHHHHHHhhchhH
Confidence 3667889999999999999999999998
No 2
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=100.00 E-value=9.5e-54 Score=444.59 Aligned_cols=225 Identities=48% Similarity=0.833 Sum_probs=203.1
Q ss_pred ccCCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCc
Q 002827 80 QLNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE 159 (876)
Q Consensus 80 ~l~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE 159 (876)
+++|+|||||||++||++|||++++.+.+... .+....++|+|++||+||
T Consensus 1 ~~~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~------------------------------~~~~~~~~d~ft~df~~~ 50 (225)
T PF07819_consen 1 KLSGIPVLFIHGNAGSYKQVRSLASELQRKAL------------------------------LNDNSSHFDFFTVDFNEE 50 (225)
T ss_pred CCCCCEEEEECcCCCCHhHHHHHHHHHhhhhh------------------------------hccCccceeEEEeccCcc
Confidence 47899999999999999999999998844321 012345799999999999
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEE
Q 002827 160 HSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLT 239 (876)
Q Consensus 160 ~SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iIT 239 (876)
.++++|.+|.+|++|++++|++|+++|.. ..+++++|+||||||||+|||.++.++++.++.|+++||
T Consensus 51 ~s~~~g~~l~~q~~~~~~~i~~i~~~~~~------------~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iit 118 (225)
T PF07819_consen 51 LSAFHGRTLQRQAEFLAEAIKYILELYKS------------NRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIIT 118 (225)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHhhhh------------ccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEE
Confidence 99999999999999999999999999942 124578999999999999999999988887889999999
Q ss_pred ecCCCCCCCcccCcchHHHHHHHHHHHHhccccCCCCCCCCccCCCCCcceEEEEecCCCCcccCCCCccccCCCCCCCc
Q 002827 240 LSSPHQSPPLALQPSLGNYFARVNDEWRKGYEAHTTPTGHHVSNSRLSHVVVVSISAGYHDYQVRSKIESLDGIVPPTHG 319 (876)
Q Consensus 240 L~tPh~~pPvafD~~l~~~Y~~vn~~W~~~~~~~~s~~~~~~~~~~l~~V~lvSIaGG~~D~~VpsdlTsl~~lvP~t~g 319 (876)
++|||.++|+++|+.+.++|+.++++|++.+.. ...++++.++||+||.+|++||+++|.+++++|++++
T Consensus 119 l~tPh~g~~~~~d~~~~~~y~~~~~~~~~~~~~----------~~~~~~v~~vSi~gG~~D~~v~~~~t~~~~~~~~~~~ 188 (225)
T PF07819_consen 119 LGTPHRGSPLAFDRSLDRFYKRLNNFWRKNYSP----------ADSLRDVTVVSIAGGIRDTLVPSDLTSLDGLVPPTNG 188 (225)
T ss_pred EcCCCCCccccchHHHHHHHHHHHHHHHHhccc----------ccccCCceEEEecCCcccccccccccccccccCcccc
Confidence 999999999999999999999999999986543 1236799999999999999999999999999999999
Q ss_pred eeeeecccCceeecCCCCceeecHHHHHHHHHHHHhh
Q 002827 320 FMISSTGMKNVWLSMEHQAILWCNQLVVQVSHTLLSL 356 (876)
Q Consensus 320 ~tV~TTsIPgVWvs~DH~aIvWC~QLv~~iAr~Ll~l 356 (876)
++++||+||+||+++||+|||||+||+.++||+|++|
T Consensus 189 ~~~~tt~ip~v~~~~dH~~ivWC~ql~~~i~~~l~~~ 225 (225)
T PF07819_consen 189 LSVSTTSIPGVWTSTDHQAIVWCNQLVLVIARALFDM 225 (225)
T ss_pred ceeccccCCccccCCCCCEEEEehhHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999985
No 3
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.30 E-value=3.2e-11 Score=129.03 Aligned_cols=225 Identities=15% Similarity=0.157 Sum_probs=128.2
Q ss_pred cCCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc
Q 002827 81 LNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (876)
Q Consensus 81 l~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~ 160 (876)
....|.|||||..|+......+...+.+.......- .. ....++ |... ..-.++.. ..--+.-|-|....
T Consensus 9 ~~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~---l~-v~V~~~--G~v~--~~G~~~~~--~~nPiIqV~F~~n~ 78 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTANSFNHMINRLENKQGVAQKV---LT-VTVSKN--GKVK--VSGKLSKN--AKNPIIQVNFEDNR 78 (255)
T ss_dssp -S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-E---EE-EEEETT--SEEE--EES---TT---SS-EEEEEESSTT
T ss_pred cCCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceE---EE-EEECCC--CeEE--EeeecCCC--CCCCEEEEEecCCC
Confidence 467899999999999999999999887332211000 00 000111 1000 00011111 12335555565443
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCc--ccccEEE
Q 002827 161 SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRK--SAVETVL 238 (876)
Q Consensus 161 SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~--~~V~~iI 238 (876)
. ....+||+|+..+++++.+.|+ .+.+.+|||||||+++..++....-+. ..++++|
T Consensus 79 ~----~~~~~qa~wl~~vl~~L~~~Y~-----------------~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V 137 (255)
T PF06028_consen 79 N----ANYKKQAKWLKKVLKYLKKKYH-----------------FKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLV 137 (255)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHCC-------------------SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEE
T ss_pred c----CCHHHHHHHHHHHHHHHHHhcC-----------------CCEEeEEEECccHHHHHHHHHHhccCCCCcccceEE
Confidence 2 4578999999999999999987 579999999999999998876321111 3689999
Q ss_pred EecCCCCCCCcccC------------cchHHHHHHHHHHHHhccccCCCCCCCCccCCCCCcceEEEEecC-----CCCc
Q 002827 239 TLSSPHQSPPLALQ------------PSLGNYFARVNDEWRKGYEAHTTPTGHHVSNSRLSHVVVVSISAG-----YHDY 301 (876)
Q Consensus 239 TL~tPh~~pPvafD------------~~l~~~Y~~vn~~W~~~~~~~~s~~~~~~~~~~l~~V~lvSIaGG-----~~D~ 301 (876)
+||+|..+....-+ ..+...|+.+-..-++. .-.++.+++|+|- ..|.
T Consensus 138 ~Ia~pfng~~~~~~~~~~~~~~~~gp~~~~~~y~~l~~~~~~~---------------~p~~i~VLnI~G~~~~g~~sDG 202 (255)
T PF06028_consen 138 TIAGPFNGILGMNDDQNQNDLNKNGPKSMTPMYQDLLKNRRKN---------------FPKNIQVLNIYGDLEDGSNSDG 202 (255)
T ss_dssp EES--TTTTTCCSC-TTTT-CSTT-BSS--HHHHHHHHTHGGG---------------STTT-EEEEEEEESBTTCSBTS
T ss_pred EeccccCccccccccchhhhhcccCCcccCHHHHHHHHHHHhh---------------CCCCeEEEEEecccCCCCCCCe
Confidence 99999998533321 13344555442211111 1127899999996 3677
Q ss_pred ccCCCCc-cccCCCCCCCceeeeecccCceeecCCCCceeecHHHHHHHHHHHH
Q 002827 302 QVRSKIE-SLDGIVPPTHGFMISSTGMKNVWLSMEHQAILWCNQLVVQVSHTLL 354 (876)
Q Consensus 302 ~VpsdlT-sl~~lvP~t~g~tV~TTsIPgVWvs~DH~aIvWC~QLv~~iAr~Ll 354 (876)
.||-..+ ++..++.. +.-..-+-.++| -.+.|..+-=..|+.+.|+++|.
T Consensus 203 ~V~~~Ss~sl~~L~~~-~~~~Y~e~~v~G--~~a~HS~LheN~~V~~~I~~FLw 253 (255)
T PF06028_consen 203 IVPNASSLSLRYLLKN-RAKSYQEKTVTG--KDAQHSQLHENPQVDKLIIQFLW 253 (255)
T ss_dssp SSBHHHHCTHHHHCTT-TSSEEEEEEEES--GGGSCCGGGCCHHHHHHHHHHHC
T ss_pred EEeHHHHHHHHHHhhc-ccCceEEEEEEC--CCCccccCCCCHHHHHHHHHHhc
Confidence 7776544 34444432 111222222333 35789999888999999999884
No 4
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.12 E-value=4.3e-10 Score=119.18 Aligned_cols=110 Identities=14% Similarity=0.129 Sum_probs=72.8
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccC
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~S 161 (876)
.|.||||+||+.++.++|+.++..+++.|+. +.|+..|++ .... .+..+ .-
T Consensus 28 ~~~~vlllHG~~~~~~~w~~~~~~L~~~~~v------------i~~DlpG~G------------~S~~----~~~~~-~~ 78 (294)
T PLN02824 28 SGPALVLVHGFGGNADHWRKNTPVLAKSHRV------------YAIDLLGYG------------YSDK----PNPRS-AP 78 (294)
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhCCeE------------EEEcCCCCC------------CCCC----Ccccc-cc
Confidence 3679999999999999999999998876532 122222222 1100 00000 00
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 162 AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 162 A~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
--+..+++++++.+.+.|+.+ . .++++||||||||.||..++. .+ +++|+++|.++
T Consensus 79 ~~~~~~~~~~a~~l~~~l~~l----~-----------------~~~~~lvGhS~Gg~va~~~a~--~~-p~~v~~lili~ 134 (294)
T PLN02824 79 PNSFYTFETWGEQLNDFCSDV----V-----------------GDPAFVICNSVGGVVGLQAAV--DA-PELVRGVMLIN 134 (294)
T ss_pred ccccCCHHHHHHHHHHHHHHh----c-----------------CCCeEEEEeCHHHHHHHHHHH--hC-hhheeEEEEEC
Confidence 001246788888887777643 1 357999999999999998776 22 46799999998
Q ss_pred CCC
Q 002827 242 SPH 244 (876)
Q Consensus 242 tPh 244 (876)
++.
T Consensus 135 ~~~ 137 (294)
T PLN02824 135 ISL 137 (294)
T ss_pred CCc
Confidence 754
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.09 E-value=1.2e-09 Score=116.61 Aligned_cols=130 Identities=17% Similarity=0.218 Sum_probs=83.8
Q ss_pred CeeeeeeccceeecCCCCCCCCCCCceEEEeeeCCcccchHHhhhccCCCcEEEecCCcccHHhHHHHHHHHHHH-hcCC
Q 002827 35 GCVMTYMYPTYIPISSTEGASSSARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPGNAGSYKQVRSLAAESDRA-YQGG 113 (876)
Q Consensus 35 ~C~MtyMyPsY~~I~~~~~~~~~~kY~LYlYrEg~~~~~~~~~~~~l~g~PVlFIHG~~GS~kqwrsia~~ls~~-y~~~ 113 (876)
.|--.-+.+.|++++..+. .++.++ |.|.. ..+|.|||||||+.++...|+.++..|++. |+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~----~~~~i~-y~~~G----------~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~-- 75 (302)
T PRK00870 13 NLPDYPFAPHYVDVDDGDG----GPLRMH-YVDEG----------PADGPPVLLLHGEPSWSYLYRKMIPILAAAGHR-- 75 (302)
T ss_pred CCcCCCCCceeEeecCCCC----ceEEEE-EEecC----------CCCCCEEEEECCCCCchhhHHHHHHHHHhCCCE--
Confidence 3443344667777664332 346666 54521 124679999999999999999999988753 43
Q ss_pred CCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCc--c---chhhHHHHHHHHHHHHHHHHHHhcc
Q 002827 114 PLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSA--M---DGQILEEHAEYVVYAIHRILDQYRE 188 (876)
Q Consensus 114 ~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA--~---~G~tL~dQAeyvn~aI~~IL~lY~~ 188 (876)
++++|+.+.+.. . ...+++++++.+.+.++.+ +
T Consensus 76 -------------------------------------vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l----~- 113 (302)
T PRK00870 76 -------------------------------------VIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL----D- 113 (302)
T ss_pred -------------------------------------EEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc----C-
Confidence 333333322111 0 0124667777766655442 1
Q ss_pred chhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecC
Q 002827 189 SQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (876)
Q Consensus 189 ~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~t 242 (876)
.++++||||||||.+|..++. .+ ++.|+++|.+++
T Consensus 114 ----------------~~~v~lvGhS~Gg~ia~~~a~--~~-p~~v~~lvl~~~ 148 (302)
T PRK00870 114 ----------------LTDVTLVCQDWGGLIGLRLAA--EH-PDRFARLVVANT 148 (302)
T ss_pred ----------------CCCEEEEEEChHHHHHHHHHH--hC-hhheeEEEEeCC
Confidence 357999999999999999886 22 567999999985
No 6
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.05 E-value=1.4e-09 Score=110.92 Aligned_cols=101 Identities=13% Similarity=0.089 Sum_probs=65.9
Q ss_pred CCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCc
Q 002827 83 GVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSA 162 (876)
Q Consensus 83 g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA 162 (876)
++|||||||+.|++..|+.++..+. .|+. +.++ +++.+....
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~v------------i~~D------------~~G~G~S~~------------- 43 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPR------------LYID------------LPGHGGSAA------------- 43 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCE------------EEec------------CCCCCCCCC-------------
Confidence 4679999999999999999998663 3432 1122 222221100
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecC
Q 002827 163 MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (876)
Q Consensus 163 ~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~t 242 (876)
-.+..+.++++.+.+.++.. + .+++++|||||||.+|..++. .+.+++|+++|.+++
T Consensus 44 ~~~~~~~~~~~~l~~~l~~~----~-----------------~~~~~lvG~S~Gg~va~~~a~--~~~~~~v~~lvl~~~ 100 (242)
T PRK11126 44 ISVDGFADVSRLLSQTLQSY----N-----------------ILPYWLVGYSLGGRIAMYYAC--QGLAGGLCGLIVEGG 100 (242)
T ss_pred ccccCHHHHHHHHHHHHHHc----C-----------------CCCeEEEEECHHHHHHHHHHH--hCCcccccEEEEeCC
Confidence 01124666666665555431 2 468999999999999999876 233446999998875
Q ss_pred CC
Q 002827 243 PH 244 (876)
Q Consensus 243 Ph 244 (876)
+.
T Consensus 101 ~~ 102 (242)
T PRK11126 101 NP 102 (242)
T ss_pred CC
Confidence 53
No 7
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.04 E-value=1.2e-09 Score=115.06 Aligned_cols=100 Identities=15% Similarity=0.155 Sum_probs=71.6
Q ss_pred CCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCc
Q 002827 83 GVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSA 162 (876)
Q Consensus 83 g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA 162 (876)
+.||||+||+.++.+.|+.++..+++.|+ ++++|+.+.+..
T Consensus 25 ~~plvllHG~~~~~~~w~~~~~~L~~~~~---------------------------------------vi~~Dl~G~G~S 65 (276)
T TIGR02240 25 LTPLLIFNGIGANLELVFPFIEALDPDLE---------------------------------------VIAFDVPGVGGS 65 (276)
T ss_pred CCcEEEEeCCCcchHHHHHHHHHhccCce---------------------------------------EEEECCCCCCCC
Confidence 46999999999999999999987765443 233333322111
Q ss_pred --c-chhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEE
Q 002827 163 --M-DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLT 239 (876)
Q Consensus 163 --~-~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iIT 239 (876)
- .+.++.++++.+.+.|+.+ + .++++||||||||.||..++.. + ++.|+++|.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~i~~l----~-----------------~~~~~LvG~S~GG~va~~~a~~--~-p~~v~~lvl 121 (276)
T TIGR02240 66 STPRHPYRFPGLAKLAARMLDYL----D-----------------YGQVNAIGVSWGGALAQQFAHD--Y-PERCKKLIL 121 (276)
T ss_pred CCCCCcCcHHHHHHHHHHHHHHh----C-----------------cCceEEEEECHHHHHHHHHHHH--C-HHHhhheEE
Confidence 0 1235777787877776653 2 3579999999999999998862 2 567999999
Q ss_pred ecCCCC
Q 002827 240 LSSPHQ 245 (876)
Q Consensus 240 L~tPh~ 245 (876)
++++..
T Consensus 122 ~~~~~~ 127 (276)
T TIGR02240 122 AATAAG 127 (276)
T ss_pred eccCCc
Confidence 998765
No 8
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.03 E-value=1.4e-09 Score=115.30 Aligned_cols=99 Identities=22% Similarity=0.243 Sum_probs=71.1
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc-
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH- 160 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~- 160 (876)
+|.|||||||+.++...|+.++..|++.|+ ++++|..+-+
T Consensus 26 ~g~~vvllHG~~~~~~~w~~~~~~L~~~~~---------------------------------------via~D~~G~G~ 66 (295)
T PRK03592 26 EGDPIVFLHGNPTSSYLWRNIIPHLAGLGR---------------------------------------CLAPDLIGMGA 66 (295)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhhCCE---------------------------------------EEEEcCCCCCC
Confidence 568999999999999999999998876542 2222222211
Q ss_pred Cc--cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEE
Q 002827 161 SA--MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVL 238 (876)
Q Consensus 161 SA--~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iI 238 (876)
|. ..+.++.++++.+.+.++.+ + .+++++|||||||.||..++. .+ +++|+++|
T Consensus 67 S~~~~~~~~~~~~a~dl~~ll~~l----~-----------------~~~~~lvGhS~Gg~ia~~~a~--~~-p~~v~~li 122 (295)
T PRK03592 67 SDKPDIDYTFADHARYLDAWFDAL----G-----------------LDDVVLVGHDWGSALGFDWAA--RH-PDRVRGIA 122 (295)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHh----C-----------------CCCeEEEEECHHHHHHHHHHH--hC-hhheeEEE
Confidence 00 01235778888877776653 1 357999999999999999876 22 57799999
Q ss_pred EecCC
Q 002827 239 TLSSP 243 (876)
Q Consensus 239 TL~tP 243 (876)
+++++
T Consensus 123 l~~~~ 127 (295)
T PRK03592 123 FMEAI 127 (295)
T ss_pred EECCC
Confidence 99974
No 9
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.98 E-value=1.8e-09 Score=112.35 Aligned_cols=46 Identities=28% Similarity=0.468 Sum_probs=34.8
Q ss_pred CceEEEEEechhHHHHHHHHhCCCcCc---c------cccEEEEecCCCCCCCcc
Q 002827 205 PKSVILVGHSVGGFVARAAIIHPLLRK---S------AVETVLTLSSPHQSPPLA 250 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p~~~~---~------~V~~iITL~tPh~~pPva 250 (876)
..++++|||||||+|+|.++....-.. + .....||++|||.|...+
T Consensus 77 ~~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~~~ 131 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSRYA 131 (217)
T ss_pred cccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCccc
Confidence 468999999999999999886322111 1 456789999999997554
No 10
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.97 E-value=3.8e-09 Score=102.53 Aligned_cols=97 Identities=31% Similarity=0.411 Sum_probs=69.2
Q ss_pred EEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCc---
Q 002827 86 VLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSA--- 162 (876)
Q Consensus 86 VlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA--- 162 (876)
|||+||+.++...|+.++..+++. ++++++|+.+....
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~---------------------------------------~~v~~~d~~G~G~s~~~ 41 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARG---------------------------------------YRVIAFDLPGHGRSDPP 41 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTT---------------------------------------SEEEEEECTTSTTSSSH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCC---------------------------------------CEEEEEecCCccccccc
Confidence 799999999999999999877533 34455555542221
Q ss_pred --cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEe
Q 002827 163 --MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (876)
Q Consensus 163 --~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL 240 (876)
....+++++++.+.+.++.+ . .+++++|||||||.+|..++.. .++.|+++|.+
T Consensus 42 ~~~~~~~~~~~~~~l~~~l~~~----~-----------------~~~~~lvG~S~Gg~~a~~~a~~---~p~~v~~~vl~ 97 (228)
T PF12697_consen 42 PDYSPYSIEDYAEDLAELLDAL----G-----------------IKKVILVGHSMGGMIALRLAAR---YPDRVKGLVLL 97 (228)
T ss_dssp SSGSGGSHHHHHHHHHHHHHHT----T-----------------TSSEEEEEETHHHHHHHHHHHH---SGGGEEEEEEE
T ss_pred cccCCcchhhhhhhhhhccccc----c-----------------cccccccccccccccccccccc---cccccccceee
Confidence 22356777777776666543 2 2589999999999999998862 24579999999
Q ss_pred cCCCC
Q 002827 241 SSPHQ 245 (876)
Q Consensus 241 ~tPh~ 245 (876)
+++..
T Consensus 98 ~~~~~ 102 (228)
T PF12697_consen 98 SPPPP 102 (228)
T ss_dssp SESSS
T ss_pred ccccc
Confidence 97664
No 11
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.96 E-value=4.8e-09 Score=107.53 Aligned_cols=101 Identities=15% Similarity=0.203 Sum_probs=67.8
Q ss_pred cCCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc
Q 002827 81 LNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (876)
Q Consensus 81 l~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~ 160 (876)
.+++||||+||+.|+...|..++..+++.|+. +. .|+++++..
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~v------------i~------------~D~~G~G~s------------- 56 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVNDHDI------------IQ------------VDMRNHGLS------------- 56 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhhCCeE------------EE------------ECCCCCCCC-------------
Confidence 46789999999999999999999988765432 11 112222211
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEe
Q 002827 161 SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (876)
Q Consensus 161 SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL 240 (876)
....+.++.+.++.+.+.|+.+ + .++++||||||||.+|..++.. .++.|+++|++
T Consensus 57 ~~~~~~~~~~~~~d~~~~l~~l----~-----------------~~~~~lvGhS~Gg~va~~~a~~---~~~~v~~lvli 112 (255)
T PRK10673 57 PRDPVMNYPAMAQDLLDTLDAL----Q-----------------IEKATFIGHSMGGKAVMALTAL---APDRIDKLVAI 112 (255)
T ss_pred CCCCCCCHHHHHHHHHHHHHHc----C-----------------CCceEEEEECHHHHHHHHHHHh---CHhhcceEEEE
Confidence 0011235666666665555432 2 3579999999999999998763 25679999999
Q ss_pred cC
Q 002827 241 SS 242 (876)
Q Consensus 241 ~t 242 (876)
++
T Consensus 113 ~~ 114 (255)
T PRK10673 113 DI 114 (255)
T ss_pred ec
Confidence 74
No 12
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.94 E-value=2.6e-09 Score=110.59 Aligned_cols=97 Identities=24% Similarity=0.301 Sum_probs=62.7
Q ss_pred CCC-cEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc
Q 002827 82 NGV-PVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (876)
Q Consensus 82 ~g~-PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~ 160 (876)
+|. |||||||+.++.+.|+.++..+.++|+. +.+ |+++++... ..+
T Consensus 11 ~g~~~ivllHG~~~~~~~w~~~~~~L~~~~~v------------i~~------------Dl~G~G~S~-------~~~-- 57 (256)
T PRK10349 11 QGNVHLVLLHGWGLNAEVWRCIDEELSSHFTL------------HLV------------DLPGFGRSR-------GFG-- 57 (256)
T ss_pred CCCCeEEEECCCCCChhHHHHHHHHHhcCCEE------------EEe------------cCCCCCCCC-------CCC--
Confidence 455 5999999999999999999988766542 111 222222211 000
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEe
Q 002827 161 SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (876)
Q Consensus 161 SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL 240 (876)
...+.+.++.+ .++ . .+++++|||||||.+|..++.. .+++|+++|++
T Consensus 58 ----~~~~~~~~~~l-------~~~-~-----------------~~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lili 105 (256)
T PRK10349 58 ----ALSLADMAEAV-------LQQ-A-----------------PDKAIWLGWSLGGLVASQIALT---HPERVQALVTV 105 (256)
T ss_pred ----CCCHHHHHHHH-------Hhc-C-----------------CCCeEEEEECHHHHHHHHHHHh---ChHhhheEEEe
Confidence 11333333322 211 1 3689999999999999998762 25779999999
Q ss_pred cCC
Q 002827 241 SSP 243 (876)
Q Consensus 241 ~tP 243 (876)
+++
T Consensus 106 ~~~ 108 (256)
T PRK10349 106 ASS 108 (256)
T ss_pred cCc
Confidence 864
No 13
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.90 E-value=7.9e-09 Score=114.44 Aligned_cols=101 Identities=24% Similarity=0.341 Sum_probs=70.0
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccC
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~S 161 (876)
.|+||||+||+.++...|+.++..+++.|+ ++++|+.+.+.
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~~L~~~~~---------------------------------------via~Dl~G~G~ 127 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIGVLAKNYT---------------------------------------VYAIDLLGFGA 127 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhcCCE---------------------------------------EEEECCCCCCC
Confidence 568999999999999999999987765443 23333332211
Q ss_pred c--c--chhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEE
Q 002827 162 A--M--DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (876)
Q Consensus 162 A--~--~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~i 237 (876)
. . .+.++.++++.+.+.++.+ . .++++||||||||.+|..++.. +.+++|+++
T Consensus 128 S~~~~~~~~~~~~~a~~l~~~l~~l----~-----------------~~~~~lvGhS~Gg~ia~~~a~~--~~P~rV~~L 184 (360)
T PLN02679 128 SDKPPGFSYTMETWAELILDFLEEV----V-----------------QKPTVLIGNSVGSLACVIAASE--STRDLVRGL 184 (360)
T ss_pred CCCCCCccccHHHHHHHHHHHHHHh----c-----------------CCCeEEEEECHHHHHHHHHHHh--cChhhcCEE
Confidence 1 0 1235677777766666532 1 3589999999999999876641 125679999
Q ss_pred EEecCCC
Q 002827 238 LTLSSPH 244 (876)
Q Consensus 238 ITL~tPh 244 (876)
|.++++.
T Consensus 185 VLi~~~~ 191 (360)
T PLN02679 185 VLLNCAG 191 (360)
T ss_pred EEECCcc
Confidence 9999764
No 14
>PLN02965 Probable pheophorbidase
Probab=98.87 E-value=9.6e-09 Score=107.08 Aligned_cols=99 Identities=20% Similarity=0.257 Sum_probs=67.8
Q ss_pred CcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCcc
Q 002827 84 VPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSAM 163 (876)
Q Consensus 84 ~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA~ 163 (876)
.+||||||+.++...|+.+...|.+. ++.+.++|+.+....-
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~--------------------------------------~~~via~Dl~G~G~S~ 45 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAA--------------------------------------GFKSTCVDLTGAGISL 45 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhC--------------------------------------CceEEEecCCcCCCCC
Confidence 46999999999999999999887431 2334444444332110
Q ss_pred ----chhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEE
Q 002827 164 ----DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLT 239 (876)
Q Consensus 164 ----~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iIT 239 (876)
...++.++++.+.+.|+.+ + ..++++||||||||.||..++. .+ +++|+++|.
T Consensus 46 ~~~~~~~~~~~~a~dl~~~l~~l----~----------------~~~~~~lvGhSmGG~ia~~~a~--~~-p~~v~~lvl 102 (255)
T PLN02965 46 TDSNTVSSSDQYNRPLFALLSDL----P----------------PDHKVILVGHSIGGGSVTEALC--KF-TDKISMAIY 102 (255)
T ss_pred CCccccCCHHHHHHHHHHHHHhc----C----------------CCCCEEEEecCcchHHHHHHHH--hC-chheeEEEE
Confidence 1235677676666666542 1 0148999999999999999876 23 567999999
Q ss_pred ecCC
Q 002827 240 LSSP 243 (876)
Q Consensus 240 L~tP 243 (876)
+++.
T Consensus 103 ~~~~ 106 (255)
T PLN02965 103 VAAA 106 (255)
T ss_pred Eccc
Confidence 9874
No 15
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.85 E-value=1.3e-08 Score=108.75 Aligned_cols=101 Identities=18% Similarity=0.204 Sum_probs=69.5
Q ss_pred cCCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc
Q 002827 81 LNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (876)
Q Consensus 81 l~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~ 160 (876)
.++++|||+||+.++...|..++..|.+. +++++++|+....
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~--------------------------------------g~~vi~~dl~g~G 57 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENS--------------------------------------GYKVTCIDLKSAG 57 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhC--------------------------------------CCEEEEecccCCC
Confidence 45668999999999999999998876542 2344555554432
Q ss_pred Cc---cc-hhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccE
Q 002827 161 SA---MD-GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVET 236 (876)
Q Consensus 161 SA---~~-G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~ 236 (876)
.. .. ..++++.++.+.+.|+.+ . ..++++||||||||+++..++. .+ ++.|++
T Consensus 58 ~s~~~~~~~~~~~~~~~~l~~~i~~l---~-----------------~~~~v~lvGhS~GG~v~~~~a~--~~-p~~v~~ 114 (273)
T PLN02211 58 IDQSDADSVTTFDEYNKPLIDFLSSL---P-----------------ENEKVILVGHSAGGLSVTQAIH--RF-PKKICL 114 (273)
T ss_pred CCCCCcccCCCHHHHHHHHHHHHHhc---C-----------------CCCCEEEEEECchHHHHHHHHH--hC-hhheeE
Confidence 11 11 146777776665555432 1 1258999999999999999886 22 567999
Q ss_pred EEEecC
Q 002827 237 VLTLSS 242 (876)
Q Consensus 237 iITL~t 242 (876)
+|.+++
T Consensus 115 lv~~~~ 120 (273)
T PLN02211 115 AVYVAA 120 (273)
T ss_pred EEEecc
Confidence 999975
No 16
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.85 E-value=2.7e-08 Score=115.22 Aligned_cols=107 Identities=30% Similarity=0.336 Sum_probs=69.9
Q ss_pred CCCcEEEecCCcccHHhHHH-HHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc
Q 002827 82 NGVPVLFIPGNAGSYKQVRS-LAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrs-ia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~ 160 (876)
.+.||||+||+.|+...|+. +...+++.. ..+++++++|+.+.+
T Consensus 200 ~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~-----------------------------------~~~yrVia~Dl~G~G 244 (481)
T PLN03087 200 AKEDVLFIHGFISSSAFWTETLFPNFSDAA-----------------------------------KSTYRLFAVDLLGFG 244 (481)
T ss_pred CCCeEEEECCCCccHHHHHHHHHHHHHHHh-----------------------------------hCCCEEEEECCCCCC
Confidence 35799999999999999986 334444321 124566666766532
Q ss_pred Ccc----chhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccE
Q 002827 161 SAM----DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVET 236 (876)
Q Consensus 161 SA~----~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~ 236 (876)
..- ..-++.++++.+. +.+++.++ .+++++|||||||++|..++.. + +++|++
T Consensus 245 ~S~~p~~~~ytl~~~a~~l~---~~ll~~lg-----------------~~k~~LVGhSmGG~iAl~~A~~--~-Pe~V~~ 301 (481)
T PLN03087 245 RSPKPADSLYTLREHLEMIE---RSVLERYK-----------------VKSFHIVAHSLGCILALALAVK--H-PGAVKS 301 (481)
T ss_pred CCcCCCCCcCCHHHHHHHHH---HHHHHHcC-----------------CCCEEEEEECHHHHHHHHHHHh--C-hHhccE
Confidence 111 1124555554442 23344433 3689999999999999998762 2 567999
Q ss_pred EEEecCCCCC
Q 002827 237 VLTLSSPHQS 246 (876)
Q Consensus 237 iITL~tPh~~ 246 (876)
+|.+++|...
T Consensus 302 LVLi~~~~~~ 311 (481)
T PLN03087 302 LTLLAPPYYP 311 (481)
T ss_pred EEEECCCccc
Confidence 9999987653
No 17
>PLN02578 hydrolase
Probab=98.84 E-value=2.4e-08 Score=110.24 Aligned_cols=100 Identities=25% Similarity=0.298 Sum_probs=65.4
Q ss_pred cCCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc
Q 002827 81 LNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (876)
Q Consensus 81 l~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~ 160 (876)
.+|.|||||||+.++...|+.+...+++.|+ ++++|+.+-+
T Consensus 84 g~g~~vvliHG~~~~~~~w~~~~~~l~~~~~---------------------------------------v~~~D~~G~G 124 (354)
T PLN02578 84 GEGLPIVLIHGFGASAFHWRYNIPELAKKYK---------------------------------------VYALDLLGFG 124 (354)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhcCCE---------------------------------------EEEECCCCCC
Confidence 3678999999999999999999887765443 2333333211
Q ss_pred Cc---cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEE
Q 002827 161 SA---MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (876)
Q Consensus 161 SA---~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~i 237 (876)
.. ...-+..+.++.+.+.++.+ . .+++++|||||||.+|..++. .+ ++.|+++
T Consensus 125 ~S~~~~~~~~~~~~a~~l~~~i~~~----~-----------------~~~~~lvG~S~Gg~ia~~~A~--~~-p~~v~~l 180 (354)
T PLN02578 125 WSDKALIEYDAMVWRDQVADFVKEV----V-----------------KEPAVLVGNSLGGFTALSTAV--GY-PELVAGV 180 (354)
T ss_pred CCCCcccccCHHHHHHHHHHHHHHh----c-----------------cCCeEEEEECHHHHHHHHHHH--hC-hHhcceE
Confidence 00 01123444444444443332 1 257999999999999999886 22 5679999
Q ss_pred EEecCC
Q 002827 238 LTLSSP 243 (876)
Q Consensus 238 ITL~tP 243 (876)
|.++++
T Consensus 181 vLv~~~ 186 (354)
T PLN02578 181 ALLNSA 186 (354)
T ss_pred EEECCC
Confidence 998753
No 18
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.84 E-value=2.7e-08 Score=98.01 Aligned_cols=99 Identities=25% Similarity=0.318 Sum_probs=63.6
Q ss_pred CCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCc
Q 002827 83 GVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSA 162 (876)
Q Consensus 83 g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA 162 (876)
++||||+||+.|+.+.|+.++..|++.| +++++|+.+....
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~~~~---------------------------------------~v~~~d~~g~G~s 41 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLGPHF---------------------------------------RCLAIDLPGHGSS 41 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhcccC---------------------------------------eEEEEcCCCCCCC
Confidence 3689999999999999999988775333 3344444322111
Q ss_pred -----cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEE
Q 002827 163 -----MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (876)
Q Consensus 163 -----~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~i 237 (876)
.+...+.+.+ .+.+..+++.+. .++++++||||||.+|..++.. + ++.|+++
T Consensus 42 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~-----------------~~~~~l~G~S~Gg~ia~~~a~~--~-~~~v~~l 98 (251)
T TIGR03695 42 QSPDEIERYDFEEAA---QDILATLLDQLG-----------------IEPFFLVGYSMGGRIALYYALQ--Y-PERVQGL 98 (251)
T ss_pred CCCCccChhhHHHHH---HHHHHHHHHHcC-----------------CCeEEEEEeccHHHHHHHHHHh--C-chheeee
Confidence 1222344433 333334433322 3589999999999999998762 2 4569999
Q ss_pred EEecCC
Q 002827 238 LTLSSP 243 (876)
Q Consensus 238 ITL~tP 243 (876)
|.++++
T Consensus 99 il~~~~ 104 (251)
T TIGR03695 99 ILESGS 104 (251)
T ss_pred EEecCC
Confidence 988754
No 19
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.84 E-value=3.1e-08 Score=102.00 Aligned_cols=101 Identities=20% Similarity=0.178 Sum_probs=67.9
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccC
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~S 161 (876)
++.+|||+||+.|+.+.|+.+...+++.|+. +++|+.+.+.
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~v---------------------------------------i~~D~~G~G~ 67 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLARSFRV---------------------------------------VAPDLPGHGF 67 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHhhCcEE---------------------------------------EeecCCCCCC
Confidence 4678999999999999999999888765432 2222221110
Q ss_pred c---c-chhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEE
Q 002827 162 A---M-DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (876)
Q Consensus 162 A---~-~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~i 237 (876)
. . ...++.++++.+.+.++.+ + .++++||||||||.+|..++.. + +++++++
T Consensus 68 S~~~~~~~~~~~~~~~~l~~~i~~~----~-----------------~~~~~lvG~S~Gg~~a~~~a~~--~-p~~v~~~ 123 (278)
T TIGR03056 68 TRAPFRFRFTLPSMAEDLSALCAAE----G-----------------LSPDGVIGHSAGAAIALRLALD--G-PVTPRMV 123 (278)
T ss_pred CCCccccCCCHHHHHHHHHHHHHHc----C-----------------CCCceEEEECccHHHHHHHHHh--C-CcccceE
Confidence 0 0 0124666676666555431 1 3578999999999999998762 2 5668999
Q ss_pred EEecCCCC
Q 002827 238 LTLSSPHQ 245 (876)
Q Consensus 238 ITL~tPh~ 245 (876)
|.++++..
T Consensus 124 v~~~~~~~ 131 (278)
T TIGR03056 124 VGINAALM 131 (278)
T ss_pred EEEcCccc
Confidence 99987543
No 20
>PRK10749 lysophospholipase L2; Provisional
Probab=98.82 E-value=2.9e-08 Score=108.36 Aligned_cols=104 Identities=13% Similarity=0.149 Sum_probs=68.2
Q ss_pred CCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCc
Q 002827 83 GVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSA 162 (876)
Q Consensus 83 g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA 162 (876)
+.+||++||+.+++..|+.++..+.+. ++++++.|+.+.+..
T Consensus 54 ~~~vll~HG~~~~~~~y~~~~~~l~~~--------------------------------------g~~v~~~D~~G~G~S 95 (330)
T PRK10749 54 DRVVVICPGRIESYVKYAELAYDLFHL--------------------------------------GYDVLIIDHRGQGRS 95 (330)
T ss_pred CcEEEEECCccchHHHHHHHHHHHHHC--------------------------------------CCeEEEEcCCCCCCC
Confidence 347999999999999999999866542 234444444433211
Q ss_pred ---------cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCccc
Q 002827 163 ---------MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSA 233 (876)
Q Consensus 163 ---------~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~ 233 (876)
-+...+.++++-+..+++.+...+ +..+++++||||||.+|..++.. + ++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----------------~~~~~~l~GhSmGG~ia~~~a~~--~-p~~ 155 (330)
T PRK10749 96 GRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPG-----------------PYRKRYALAHSMGGAILTLFLQR--H-PGV 155 (330)
T ss_pred CCCCCCCCcCccccHHHHHHHHHHHHHHHHhcC-----------------CCCCeEEEEEcHHHHHHHHHHHh--C-CCC
Confidence 011246666666666655543222 14689999999999999887752 2 456
Q ss_pred ccEEEEecCCC
Q 002827 234 VETVLTLSSPH 244 (876)
Q Consensus 234 V~~iITL~tPh 244 (876)
++++|+++++.
T Consensus 156 v~~lvl~~p~~ 166 (330)
T PRK10749 156 FDAIALCAPMF 166 (330)
T ss_pred cceEEEECchh
Confidence 99999887543
No 21
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.80 E-value=2e-08 Score=99.50 Aligned_cols=97 Identities=24% Similarity=0.304 Sum_probs=61.0
Q ss_pred CC-CcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc
Q 002827 82 NG-VPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (876)
Q Consensus 82 ~g-~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~ 160 (876)
+| .||||+||+.++.+.|+.++..+++.|+. +.++..|++ ..
T Consensus 2 ~g~~~iv~~HG~~~~~~~~~~~~~~l~~~~~v------------i~~d~~G~G------------~s------------- 44 (245)
T TIGR01738 2 QGNVHLVLIHGWGMNAEVFRCLDEELSAHFTL------------HLVDLPGHG------------RS------------- 44 (245)
T ss_pred CCCceEEEEcCCCCchhhHHHHHHhhccCeEE------------EEecCCcCc------------cC-------------
Confidence 45 68999999999999999999887655432 112222221 10
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEe
Q 002827 161 SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (876)
Q Consensus 161 SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL 240 (876)
....+..+.++++.+ .+.. .+++++|||||||.+|..++. .+ ++.++++|.+
T Consensus 45 ~~~~~~~~~~~~~~~-------~~~~------------------~~~~~lvG~S~Gg~~a~~~a~--~~-p~~v~~~il~ 96 (245)
T TIGR01738 45 RGFGPLSLADAAEAI-------AAQA------------------PDPAIWLGWSLGGLVALHIAA--TH-PDRVRALVTV 96 (245)
T ss_pred CCCCCcCHHHHHHHH-------HHhC------------------CCCeEEEEEcHHHHHHHHHHH--HC-HHhhheeeEe
Confidence 001122344444332 2211 247999999999999998775 22 5679999988
Q ss_pred cCC
Q 002827 241 SSP 243 (876)
Q Consensus 241 ~tP 243 (876)
++.
T Consensus 97 ~~~ 99 (245)
T TIGR01738 97 ASS 99 (245)
T ss_pred cCC
Confidence 653
No 22
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.79 E-value=5.4e-08 Score=97.83 Aligned_cols=98 Identities=14% Similarity=0.238 Sum_probs=67.4
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccC
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~S 161 (876)
++.+|||+||+.|+...|+.++..+.+.|+ ++++|+.+.+.
T Consensus 12 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~---------------------------------------vi~~D~~G~G~ 52 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYWAPQLDVLTQRFH---------------------------------------VVTYDHRGTGR 52 (257)
T ss_pred CCCEEEEEcCCCcchhHHHHHHHHHHhccE---------------------------------------EEEEcCCCCCC
Confidence 456799999999999999998877665442 33333332111
Q ss_pred c----cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEE
Q 002827 162 A----MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (876)
Q Consensus 162 A----~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~i 237 (876)
. -...++.+.++.+.+.|+.+ + .++++++||||||.+|..++.. + ++.|+++
T Consensus 53 S~~~~~~~~~~~~~~~~~~~~i~~~----~-----------------~~~~~l~G~S~Gg~~a~~~a~~--~-~~~v~~~ 108 (257)
T TIGR03611 53 SPGELPPGYSIAHMADDVLQLLDAL----N-----------------IERFHFVGHALGGLIGLQLALR--Y-PERLLSL 108 (257)
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHh----C-----------------CCcEEEEEechhHHHHHHHHHH--C-hHHhHHh
Confidence 0 01135677777777666543 1 3579999999999999998752 2 4569999
Q ss_pred EEecC
Q 002827 238 LTLSS 242 (876)
Q Consensus 238 ITL~t 242 (876)
|.+++
T Consensus 109 i~~~~ 113 (257)
T TIGR03611 109 VLINA 113 (257)
T ss_pred eeecC
Confidence 99875
No 23
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.77 E-value=1.8e-08 Score=110.34 Aligned_cols=108 Identities=29% Similarity=0.347 Sum_probs=69.2
Q ss_pred cCCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc
Q 002827 81 LNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (876)
Q Consensus 81 l~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~ 160 (876)
.+.+|++++||+.||.++||++++.|++.. +-++|+||...++
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l-------------------------------------~~~v~~vd~RnHG 92 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKL-------------------------------------GRDVYAVDVRNHG 92 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccc-------------------------------------cCceEEEecccCC
Confidence 578899999999999999999999887531 2388999999876
Q ss_pred Cccchhh--HHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEE
Q 002827 161 SAMDGQI--LEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVL 238 (876)
Q Consensus 161 SA~~G~t--L~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iI 238 (876)
..-+-.. =..+|+-+.+.|+.....|. -.+++|+||||||++++++.+ .+.+..+..+|
T Consensus 93 ~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~-----------------~~~~~l~GHsmGG~~~~m~~t--~~~p~~~~rli 153 (315)
T KOG2382|consen 93 SSPKITVHNYEAMAEDVKLFIDGVGGSTR-----------------LDPVVLLGHSMGGVKVAMAET--LKKPDLIERLI 153 (315)
T ss_pred CCccccccCHHHHHHHHHHHHHHcccccc-----------------cCCceecccCcchHHHHHHHH--HhcCcccceeE
Confidence 6554332 23444444444443221111 358999999999933333333 12244466555
Q ss_pred E-ecCCC
Q 002827 239 T-LSSPH 244 (876)
Q Consensus 239 T-L~tPh 244 (876)
. -.||-
T Consensus 154 v~D~sP~ 160 (315)
T KOG2382|consen 154 VEDISPG 160 (315)
T ss_pred EEecCCc
Confidence 4 45554
No 24
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.74 E-value=4.3e-08 Score=107.90 Aligned_cols=124 Identities=17% Similarity=0.191 Sum_probs=84.8
Q ss_pred CCCCceEEEeeeCCcccchHHhhhccCCCcEEEecCCcccHHh-----HHHHHHHHHHHhcCCCCccchhhhhhhccccC
Q 002827 56 SSARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPGNAGSYKQ-----VRSLAAESDRAYQGGPLEHSFYQEASLTLEEG 130 (876)
Q Consensus 56 ~~~kY~LYlYrEg~~~~~~~~~~~~l~g~PVlFIHG~~GS~kq-----wrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~ 130 (876)
....+.|+.|.-... ...+.|||++||...++.. |+++++.+.+
T Consensus 44 ~~~~~~l~~~~~~~~---------~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~---------------------- 92 (350)
T TIGR01836 44 REDKVVLYRYTPVKD---------NTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLE---------------------- 92 (350)
T ss_pred EcCcEEEEEecCCCC---------cCCCCcEEEeccccccceeccCCCCchHHHHHHH----------------------
Confidence 356899999953210 1245799999997543322 3666665442
Q ss_pred CcccccccccccCccccceeEEEecCCCccCccchhhHHHHHH-HHHHHHHHHHHHhccchhhhhhccccCCCCCCceEE
Q 002827 131 GVNIDASIFHSSNQYTRRLDWFAVDLEGEHSAMDGQILEEHAE-YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVI 209 (876)
Q Consensus 131 ~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA~~G~tL~dQAe-yvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~Vi 209 (876)
.++++|++|+.+...+....++.+.++ .+.++++++++.++ .++++
T Consensus 93 ----------------~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~-----------------~~~i~ 139 (350)
T TIGR01836 93 ----------------RGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSK-----------------LDQIS 139 (350)
T ss_pred ----------------CCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhC-----------------CCccc
Confidence 257888888865433333345677664 48888888876643 35899
Q ss_pred EEEechhHHHHHHHHhCCCcCcccccEEEEecCCCCC
Q 002827 210 LVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQS 246 (876)
Q Consensus 210 LVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~~ 246 (876)
+|||||||.++..++.. + ++.|+++|++++|...
T Consensus 140 lvGhS~GG~i~~~~~~~--~-~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 140 LLGICQGGTFSLCYAAL--Y-PDKIKNLVTMVTPVDF 173 (350)
T ss_pred EEEECHHHHHHHHHHHh--C-chheeeEEEecccccc
Confidence 99999999999987652 2 4569999999977753
No 25
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.72 E-value=5.8e-08 Score=103.88 Aligned_cols=100 Identities=20% Similarity=0.205 Sum_probs=68.1
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc-
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH- 160 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~- 160 (876)
.|.|||||||+..+...|+.+...+.+.|+. +++|+.+..
T Consensus 33 ~~~~iv~lHG~~~~~~~~~~~~~~l~~~~~v---------------------------------------i~~D~~G~G~ 73 (286)
T PRK03204 33 TGPPILLCHGNPTWSFLYRDIIVALRDRFRC---------------------------------------VAPDYLGFGL 73 (286)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHHhCCcEE---------------------------------------EEECCCCCCC
Confidence 4679999999999999999999877665432 222222211
Q ss_pred Cc---cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEE
Q 002827 161 SA---MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (876)
Q Consensus 161 SA---~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~i 237 (876)
|. -.+.++.++++.+.+.++.+ . .+++++|||||||.||..++. .+ +++|+++
T Consensus 74 S~~~~~~~~~~~~~~~~~~~~~~~~----~-----------------~~~~~lvG~S~Gg~va~~~a~--~~-p~~v~~l 129 (286)
T PRK03204 74 SERPSGFGYQIDEHARVIGEFVDHL----G-----------------LDRYLSMGQDWGGPISMAVAV--ER-ADRVRGV 129 (286)
T ss_pred CCCCCccccCHHHHHHHHHHHHHHh----C-----------------CCCEEEEEECccHHHHHHHHH--hC-hhheeEE
Confidence 00 01234667777776665442 2 357999999999999999875 22 5679999
Q ss_pred EEecCCC
Q 002827 238 LTLSSPH 244 (876)
Q Consensus 238 ITL~tPh 244 (876)
|.++++.
T Consensus 130 vl~~~~~ 136 (286)
T PRK03204 130 VLGNTWF 136 (286)
T ss_pred EEECccc
Confidence 9887654
No 26
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.71 E-value=1.7e-07 Score=105.71 Aligned_cols=101 Identities=20% Similarity=0.167 Sum_probs=72.0
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc-
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH- 160 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~- 160 (876)
.+.|||||||+.++...|+.++..|++.|+ ++++|+.+..
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~~L~~~~~---------------------------------------Via~DlpG~G~ 166 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLPVLSKNYH---------------------------------------AIAFDWLGFGF 166 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhcCCE---------------------------------------EEEECCCCCCC
Confidence 467999999999999999999988766543 2233332211
Q ss_pred Ccc------chhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccc
Q 002827 161 SAM------DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAV 234 (876)
Q Consensus 161 SA~------~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V 234 (876)
|.- ...++.++++.+.+.++.+ + .++++||||||||.||..++. .+ +++|
T Consensus 167 S~~p~~~~~~~ys~~~~a~~l~~~i~~l----~-----------------~~~~~LvG~s~GG~ia~~~a~--~~-P~~v 222 (383)
T PLN03084 167 SDKPQPGYGFNYTLDEYVSSLESLIDEL----K-----------------SDKVSLVVQGYFSPPVVKYAS--AH-PDKI 222 (383)
T ss_pred CCCCcccccccCCHHHHHHHHHHHHHHh----C-----------------CCCceEEEECHHHHHHHHHHH--hC-hHhh
Confidence 000 0135778888877777654 1 357999999999999988876 22 5679
Q ss_pred cEEEEecCCCC
Q 002827 235 ETVLTLSSPHQ 245 (876)
Q Consensus 235 ~~iITL~tPh~ 245 (876)
+++|++++|..
T Consensus 223 ~~lILi~~~~~ 233 (383)
T PLN03084 223 KKLILLNPPLT 233 (383)
T ss_pred cEEEEECCCCc
Confidence 99999998753
No 27
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.70 E-value=1.3e-07 Score=96.30 Aligned_cols=36 Identities=22% Similarity=0.371 Sum_probs=28.9
Q ss_pred ceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCC
Q 002827 206 KSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPH 244 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh 244 (876)
+++++|||||||.+|..++.. + ++.++++|.+++..
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~~--~-p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYALK--Y-GQHLKGLIISSMLD 131 (288)
T ss_pred CcEEEEEeehHHHHHHHHHHh--C-ccccceeeEecccc
Confidence 469999999999999998762 2 56799999887543
No 28
>PHA02857 monoglyceride lipase; Provisional
Probab=98.69 E-value=1.1e-07 Score=99.75 Aligned_cols=106 Identities=17% Similarity=0.248 Sum_probs=65.1
Q ss_pred CcEEEe-cCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCc
Q 002827 84 VPVLFI-PGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSA 162 (876)
Q Consensus 84 ~PVlFI-HG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA 162 (876)
.|+||+ ||+.++...|+.++..+.+. ++.+++.|+.+.+..
T Consensus 25 ~~~v~llHG~~~~~~~~~~~~~~l~~~--------------------------------------g~~via~D~~G~G~S 66 (276)
T PHA02857 25 KALVFISHGAGEHSGRYEELAENISSL--------------------------------------GILVFSHDHIGHGRS 66 (276)
T ss_pred CEEEEEeCCCccccchHHHHHHHHHhC--------------------------------------CCEEEEccCCCCCCC
Confidence 355555 99999999999999887653 122333333332211
Q ss_pred -cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 163 -MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 163 -~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
-+...+.+.++++.++++.+... ++ .....+++|+||||||.+|..++.. + ++.++++|.++
T Consensus 67 ~~~~~~~~~~~~~~~d~~~~l~~~-~~-------------~~~~~~~~lvG~S~GG~ia~~~a~~--~-p~~i~~lil~~ 129 (276)
T PHA02857 67 NGEKMMIDDFGVYVRDVVQHVVTI-KS-------------TYPGVPVFLLGHSMGATISILAAYK--N-PNLFTAMILMS 129 (276)
T ss_pred CCccCCcCCHHHHHHHHHHHHHHH-Hh-------------hCCCCCEEEEEcCchHHHHHHHHHh--C-ccccceEEEec
Confidence 11112334555666666654221 10 0013579999999999999997752 2 45699999998
Q ss_pred CCC
Q 002827 242 SPH 244 (876)
Q Consensus 242 tPh 244 (876)
++.
T Consensus 130 p~~ 132 (276)
T PHA02857 130 PLV 132 (276)
T ss_pred ccc
Confidence 543
No 29
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.67 E-value=2e-07 Score=87.44 Aligned_cols=93 Identities=28% Similarity=0.408 Sum_probs=66.5
Q ss_pred cEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCccc
Q 002827 85 PVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSAMD 164 (876)
Q Consensus 85 PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA~~ 164 (876)
||||+||+.++.++|..++..+.++ ++.++++|.......
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~--------------------------------------G~~v~~~~~~~~~~~-- 40 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQ--------------------------------------GYAVVAFDYPGHGDS-- 40 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHT--------------------------------------TEEEEEESCTTSTTS--
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHC--------------------------------------CCEEEEEecCCCCcc--
Confidence 6999999999999999999876643 456667777655444
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecC
Q 002827 165 GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (876)
Q Consensus 165 G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~t 242 (876)
+..+.+.++++.+...+. ++.+++++||||||.+|..++.. ...++++|++++
T Consensus 41 -----~~~~~~~~~~~~~~~~~~----------------~~~~i~l~G~S~Gg~~a~~~~~~----~~~v~~~v~~~~ 93 (145)
T PF12695_consen 41 -----DGADAVERVLADIRAGYP----------------DPDRIILIGHSMGGAIAANLAAR----NPRVKAVVLLSP 93 (145)
T ss_dssp -----HHSHHHHHHHHHHHHHHC----------------TCCEEEEEEETHHHHHHHHHHHH----STTESEEEEESE
T ss_pred -----chhHHHHHHHHHHHhhcC----------------CCCcEEEEEEccCcHHHHHHhhh----ccceeEEEEecC
Confidence 122244445554432222 36799999999999999997762 146999999985
No 30
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.67 E-value=1.2e-07 Score=99.02 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=31.8
Q ss_pred CceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCCC
Q 002827 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQS 246 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~~ 246 (876)
.+++++|||||||.+|..++. .+ ++.|+++|.++++...
T Consensus 100 ~~~~~lvG~S~Gg~ia~~~a~--~~-p~~v~~lvl~~~~~~~ 138 (282)
T TIGR03343 100 IEKAHLVGNSMGGATALNFAL--EY-PDRIGKLILMGPGGLG 138 (282)
T ss_pred CCCeeEEEECchHHHHHHHHH--hC-hHhhceEEEECCCCCC
Confidence 468999999999999999886 22 5679999999876543
No 31
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.67 E-value=1e-07 Score=104.59 Aligned_cols=104 Identities=18% Similarity=0.230 Sum_probs=64.3
Q ss_pred CcEEEecCCcccHHh-HHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCc
Q 002827 84 VPVLFIPGNAGSYKQ-VRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSA 162 (876)
Q Consensus 84 ~PVlFIHG~~GS~kq-wrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA 162 (876)
.+|||+||+.++... |+.++..+.+. ++.++++|+.+.+..
T Consensus 88 ~~iv~lHG~~~~~~~~~~~~~~~l~~~--------------------------------------g~~v~~~D~~G~G~S 129 (349)
T PLN02385 88 AAVCFCHGYGDTCTFFFEGIARKIASS--------------------------------------GYGVFAMDYPGFGLS 129 (349)
T ss_pred eEEEEECCCCCccchHHHHHHHHHHhC--------------------------------------CCEEEEecCCCCCCC
Confidence 569999999888764 68888766542 345556666543211
Q ss_pred --cch--hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEE
Q 002827 163 --MDG--QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVL 238 (876)
Q Consensus 163 --~~G--~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iI 238 (876)
..| .++.+.++-+.+.++.+.... ...+.+++|+||||||.||..++.. + ++.++++|
T Consensus 130 ~~~~~~~~~~~~~~~dv~~~l~~l~~~~---------------~~~~~~~~LvGhSmGG~val~~a~~--~-p~~v~glV 191 (349)
T PLN02385 130 EGLHGYIPSFDDLVDDVIEHYSKIKGNP---------------EFRGLPSFLFGQSMGGAVALKVHLK--Q-PNAWDGAI 191 (349)
T ss_pred CCCCCCcCCHHHHHHHHHHHHHHHHhcc---------------ccCCCCEEEEEeccchHHHHHHHHh--C-cchhhhee
Confidence 112 144554444444444331110 0123579999999999999987752 2 45699999
Q ss_pred EecCC
Q 002827 239 TLSSP 243 (876)
Q Consensus 239 TL~tP 243 (876)
.+++.
T Consensus 192 Li~p~ 196 (349)
T PLN02385 192 LVAPM 196 (349)
T ss_pred Eeccc
Confidence 99853
No 32
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.66 E-value=7.3e-08 Score=95.55 Aligned_cols=100 Identities=14% Similarity=0.238 Sum_probs=66.1
Q ss_pred CCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCc
Q 002827 83 GVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSA 162 (876)
Q Consensus 83 g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA 162 (876)
.+++||+||+.++...|+.++..+.+.| .++++|+.+....
T Consensus 13 ~~~li~~hg~~~~~~~~~~~~~~l~~~~---------------------------------------~v~~~d~~G~G~s 53 (251)
T TIGR02427 13 APVLVFINSLGTDLRMWDPVLPALTPDF---------------------------------------RVLRYDKRGHGLS 53 (251)
T ss_pred CCeEEEEcCcccchhhHHHHHHHhhccc---------------------------------------EEEEecCCCCCCC
Confidence 3468999999999999999988765443 2233333221110
Q ss_pred -c--chhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEE
Q 002827 163 -M--DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLT 239 (876)
Q Consensus 163 -~--~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iIT 239 (876)
. ...++.++++.+.+.++.+ + .++++++||||||.+|..++.. .++.|+++|.
T Consensus 54 ~~~~~~~~~~~~~~~~~~~i~~~----~-----------------~~~v~liG~S~Gg~~a~~~a~~---~p~~v~~li~ 109 (251)
T TIGR02427 54 DAPEGPYSIEDLADDVLALLDHL----G-----------------IERAVFCGLSLGGLIAQGLAAR---RPDRVRALVL 109 (251)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHh----C-----------------CCceEEEEeCchHHHHHHHHHH---CHHHhHHHhh
Confidence 0 0124666676665555432 1 2579999999999999987762 2567999999
Q ss_pred ecCCCC
Q 002827 240 LSSPHQ 245 (876)
Q Consensus 240 L~tPh~ 245 (876)
+++++.
T Consensus 110 ~~~~~~ 115 (251)
T TIGR02427 110 SNTAAK 115 (251)
T ss_pred ccCccc
Confidence 986643
No 33
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.65 E-value=1e-07 Score=118.82 Aligned_cols=126 Identities=24% Similarity=0.256 Sum_probs=85.8
Q ss_pred CCCCceEEEeeeCCcccchHHhhhccCCCcEEEecCCcccHHhHHHH-----HHHHHHHhcCCCCccchhhhhhhccccC
Q 002827 56 SSARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPGNAGSYKQVRSL-----AAESDRAYQGGPLEHSFYQEASLTLEEG 130 (876)
Q Consensus 56 ~~~kY~LYlYrEg~~~~~~~~~~~~l~g~PVlFIHG~~GS~kqwrsi-----a~~ls~~y~~~~~~~~~~~~~~i~p~~~ 130 (876)
...+++||.|.-...++ ..+..|+|||||||+..++..|+.. ...|.+
T Consensus 45 ~~~~~~l~~y~~~~~~~-----~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~---------------------- 97 (994)
T PRK07868 45 SVPMYRLRRYFPPDNRP-----GQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHR---------------------- 97 (994)
T ss_pred EcCcEEEEEeCCCCccc-----cccCCCCcEEEECCCCCCccceecCCcccHHHHHHH----------------------
Confidence 36789999994322111 1124679999999999999999865 232221
Q ss_pred CcccccccccccCccccceeEEEecCCCccCccc---hhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCce
Q 002827 131 GVNIDASIFHSSNQYTRRLDWFAVDLEGEHSAMD---GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKS 207 (876)
Q Consensus 131 ~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA~~---G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ 207 (876)
.++++|++|+.. ...-. ..++.++++++.++++.+..+- .++
T Consensus 98 ----------------~g~~v~~~d~G~-~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~------------------~~~ 142 (994)
T PRK07868 98 ----------------AGLDPWVIDFGS-PDKVEGGMERNLADHVVALSEAIDTVKDVT------------------GRD 142 (994)
T ss_pred ----------------CCCEEEEEcCCC-CChhHcCccCCHHHHHHHHHHHHHHHHHhh------------------CCc
Confidence 257888888753 12111 1467777777777777664331 247
Q ss_pred EEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCC
Q 002827 208 VILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 208 ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~ 245 (876)
+++|||||||.+|..++.. +.+++|+++|+++||+.
T Consensus 143 v~lvG~s~GG~~a~~~aa~--~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAY--RRSKDIASIVTFGSPVD 178 (994)
T ss_pred eEEEEEChhHHHHHHHHHh--cCCCccceEEEEecccc
Confidence 9999999999999887652 22457999999999964
No 34
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.65 E-value=1.9e-07 Score=105.71 Aligned_cols=104 Identities=20% Similarity=0.231 Sum_probs=70.2
Q ss_pred CcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCcc
Q 002827 84 VPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSAM 163 (876)
Q Consensus 84 ~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA~ 163 (876)
.+|||+||+.++...|+.++..+.+. ++.+++.|..+....-
T Consensus 137 ~~Vl~lHG~~~~~~~~~~~a~~L~~~--------------------------------------Gy~V~~~D~rGhG~S~ 178 (395)
T PLN02652 137 GILIIIHGLNEHSGRYLHFAKQLTSC--------------------------------------GFGVYAMDWIGHGGSD 178 (395)
T ss_pred eEEEEECCchHHHHHHHHHHHHHHHC--------------------------------------CCEEEEeCCCCCCCCC
Confidence 36999999999999999988877542 2344555554432111
Q ss_pred --ch--hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEE
Q 002827 164 --DG--QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLT 239 (876)
Q Consensus 164 --~G--~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iIT 239 (876)
.| ..+.++++-+.++++++...+. ..+++++||||||.+|..++.+|+. ++.++++|.
T Consensus 179 ~~~~~~~~~~~~~~Dl~~~l~~l~~~~~-----------------~~~i~lvGhSmGG~ial~~a~~p~~-~~~v~glVL 240 (395)
T PLN02652 179 GLHGYVPSLDYVVEDTEAFLEKIRSENP-----------------GVPCFLFGHSTGGAVVLKAASYPSI-EDKLEGIVL 240 (395)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHHhCC-----------------CCCEEEEEECHHHHHHHHHHhccCc-ccccceEEE
Confidence 11 2455666666777776643322 2479999999999999988776543 457999998
Q ss_pred ecCC
Q 002827 240 LSSP 243 (876)
Q Consensus 240 L~tP 243 (876)
.++.
T Consensus 241 ~sP~ 244 (395)
T PLN02652 241 TSPA 244 (395)
T ss_pred ECcc
Confidence 7643
No 35
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.64 E-value=9.1e-08 Score=100.61 Aligned_cols=113 Identities=25% Similarity=0.307 Sum_probs=64.6
Q ss_pred CcEEEecCCcc-cHHhHHHHHHHHHHH-hcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccC
Q 002827 84 VPVLFIPGNAG-SYKQVRSLAAESDRA-YQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (876)
Q Consensus 84 ~PVlFIHG~~G-S~kqwrsia~~ls~~-y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~S 161 (876)
.|||||||+.+ .+..|..++..|.+. | ..-++|+.++.....
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY------------------------------------~~~~vya~tyg~~~~ 45 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGY------------------------------------CDSEVYALTYGSGNG 45 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--------------------------------------CCCEEEE--S-CCH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCC------------------------------------CcceeEeccCCCCCC
Confidence 59999999999 889999999977653 1 122467777765433
Q ss_pred --ccch-hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCc---------
Q 002827 162 --AMDG-QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLL--------- 229 (876)
Q Consensus 162 --A~~G-~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~--------- 229 (876)
.... ....+.++-+.+.|+.+++..+ . +|.||||||||.+||.++..-.-
T Consensus 46 ~~~~~~~~~~~~~~~~l~~fI~~Vl~~TG-----------------a-kVDIVgHS~G~~iaR~yi~~~~~~d~~~~lg~ 107 (219)
T PF01674_consen 46 SPSVQNAHMSCESAKQLRAFIDAVLAYTG-----------------A-KVDIVGHSMGGTIARYYIKGGGGADKVVNLGP 107 (219)
T ss_dssp HTHHHHHHB-HHHHHHHHHHHHHHHHHHT--------------------EEEEEETCHHHHHHHHHHHCTGGGTEEE---
T ss_pred CCcccccccchhhHHHHHHHHHHHHHhhC-----------------C-EEEEEEcCCcCHHHHHHHHHcCCCCcccCccc
Confidence 1211 1133445556666666654322 3 89999999999999999862110
Q ss_pred -CcccccEEEEecCCCCCCCcc
Q 002827 230 -RKSAVETVLTLSSPHQSPPLA 250 (876)
Q Consensus 230 -~~~~V~~iITL~tPh~~pPva 250 (876)
-.+.|.+.|.++.|..+....
T Consensus 108 ~~~~~v~t~v~lag~n~G~~~~ 129 (219)
T PF01674_consen 108 PLTSKVGTFVGLAGANHGLTSC 129 (219)
T ss_dssp -GGG-EEEEEEES--TT--CGH
T ss_pred cccccccccccccccccccccc
Confidence 135688899998777765443
No 36
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.63 E-value=2.2e-07 Score=100.66 Aligned_cols=80 Identities=15% Similarity=0.196 Sum_probs=51.8
Q ss_pred ceeEEEecCCCccCc--cch--hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHH
Q 002827 148 RLDWFAVDLEGEHSA--MDG--QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAA 223 (876)
Q Consensus 148 ~~D~FavDFnEE~SA--~~G--~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~ 223 (876)
++.+++.|+.+.+.. ..| ..+.++++-+..+|+++..... ....+++|+||||||.+|..+
T Consensus 87 Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~---------------~~~~~i~l~GhSmGG~ia~~~ 151 (330)
T PLN02298 87 GFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREE---------------FQGLPRFLYGESMGGAICLLI 151 (330)
T ss_pred CCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhccc---------------CCCCCEEEEEecchhHHHHHH
Confidence 456666666654321 112 2566777777777777643211 112469999999999999887
Q ss_pred HhCCCcCcccccEEEEecCCCC
Q 002827 224 IIHPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 224 l~~p~~~~~~V~~iITL~tPh~ 245 (876)
... + ++.|+++|+++++..
T Consensus 152 a~~--~-p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 152 HLA--N-PEGFDGAVLVAPMCK 170 (330)
T ss_pred Hhc--C-cccceeEEEeccccc
Confidence 752 2 456999999986543
No 37
>PRK06489 hypothetical protein; Provisional
Probab=98.63 E-value=8.8e-08 Score=105.85 Aligned_cols=35 Identities=20% Similarity=0.364 Sum_probs=28.0
Q ss_pred ceE-EEEEechhHHHHHHHHhCCCcCcccccEEEEecCC
Q 002827 206 KSV-ILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSP 243 (876)
Q Consensus 206 ~~V-iLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tP 243 (876)
+++ +||||||||.||..++.. + +++|+++|.+++.
T Consensus 153 ~~~~~lvG~SmGG~vAl~~A~~--~-P~~V~~LVLi~s~ 188 (360)
T PRK06489 153 KHLRLILGTSMGGMHAWMWGEK--Y-PDFMDALMPMASQ 188 (360)
T ss_pred CceeEEEEECHHHHHHHHHHHh--C-chhhheeeeeccC
Confidence 466 489999999999997762 2 5679999998763
No 38
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.63 E-value=1.9e-07 Score=99.40 Aligned_cols=221 Identities=16% Similarity=0.225 Sum_probs=124.2
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccC
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~S 161 (876)
..+|-|||||..|+.....-++..+...|+.+....+.+-. ++ + +....+....+-..=++.|.=|-
T Consensus 44 ~~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~----~d-g-------slk~tGk~~Kd~~nP~I~~gfe~- 110 (288)
T COG4814 44 VAIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVD----VD-G-------SLKVTGKISKDAKNPIIEFGFED- 110 (288)
T ss_pred cccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEc----CC-C-------cEEEeeeecccCCCCeEEEEEec-
Confidence 46899999999999999999999999888543221111100 00 0 00000111000001112222111
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcC--cccccEEEE
Q 002827 162 AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLR--KSAVETVLT 239 (876)
Q Consensus 162 A~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~--~~~V~~iIT 239 (876)
.-.++.+|+.|+..++.++.++|+ .+.+..|||||||.-+-.|+..-..+ -..++.+|.
T Consensus 111 --n~~s~~~~s~wlk~~msyL~~~Y~-----------------i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~ 171 (288)
T COG4814 111 --NTASGLDQSKWLKKAMSYLQKHYN-----------------IPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVS 171 (288)
T ss_pred --CcCchhhHHHHHHHHHHHHHHhcC-----------------CceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEE
Confidence 113567899999999999999997 57899999999998877776521111 135899999
Q ss_pred ecCCCCCCCcccCcchHHH--------HHHHHHHHHhccccCCCCCCCCccCCCCCcceEEEEecCCCCcccCCCCcccc
Q 002827 240 LSSPHQSPPLALQPSLGNY--------FARVNDEWRKGYEAHTTPTGHHVSNSRLSHVVVVSISAGYHDYQVRSKIESLD 311 (876)
Q Consensus 240 L~tPh~~pPvafD~~l~~~--------Y~~vn~~W~~~~~~~~s~~~~~~~~~~l~~V~lvSIaGG~~D~~VpsdlTsl~ 311 (876)
|+.|++..-+.-|-...++ =....++|.+.+... + .++-++.|+|-..| .+.-|
T Consensus 172 l~gpfN~~~l~~de~v~~v~~~~~~~~~t~y~~y~~~n~k~v----------~--~~~evl~IaGDl~d------g~~tD 233 (288)
T COG4814 172 LAGPFNVGNLVPDETVTDVLKDGPGLIKTPYYDYIAKNYKKV----------S--PNTEVLLIAGDLDD------GKQTD 233 (288)
T ss_pred ecccccccccCCCcchheeeccCccccCcHHHHHHHhcceeC----------C--CCcEEEEEeccccc------CCcCC
Confidence 9999993322222222111 011235676654421 1 26789999887654 23334
Q ss_pred CCCCCCCcee-----------eeecccCceeecCCCCceeecHHHHHHHHHHHH
Q 002827 312 GIVPPTHGFM-----------ISSTGMKNVWLSMEHQAILWCNQLVVQVSHTLL 354 (876)
Q Consensus 312 ~lvP~t~g~t-----------V~TTsIPgVWvs~DH~aIvWC~QLv~~iAr~Ll 354 (876)
+.||+...++ +...-++| =.+.|..+-=..++..-+..+|.
T Consensus 234 G~Vp~assls~~~lf~~~~ksy~e~~~~G--k~a~Hs~lhen~~v~~yv~~FLw 285 (288)
T COG4814 234 GAVPWASSLSIYHLFKKNGKSYIESLYKG--KDARHSKLHENPTVAKYVKNFLW 285 (288)
T ss_pred CceechHhHHHHHHhccCcceeEEEeeeC--CcchhhccCCChhHHHHHHHHhh
Confidence 5566543322 11111111 23556666666666666665554
No 39
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.58 E-value=1.1e-07 Score=104.22 Aligned_cols=74 Identities=20% Similarity=0.287 Sum_probs=48.9
Q ss_pred ceeEEEecCCCccCccc-hhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCce-EEEEEechhHHHHHHHHh
Q 002827 148 RLDWFAVDLEGEHSAMD-GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKS-VILVGHSVGGFVARAAII 225 (876)
Q Consensus 148 ~~D~FavDFnEE~SA~~-G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~-ViLVGHSMGGiVAr~~l~ 225 (876)
++.++++|+.+..+... +..+.++|+-+.+.++.+ + .++ ++||||||||.||..++.
T Consensus 99 ~~~Vi~~Dl~G~g~s~~~~~~~~~~a~dl~~ll~~l----~-----------------l~~~~~lvG~SmGG~vA~~~A~ 157 (343)
T PRK08775 99 RFRLLAFDFIGADGSLDVPIDTADQADAIALLLDAL----G-----------------IARLHAFVGYSYGALVGLQFAS 157 (343)
T ss_pred ccEEEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHc----C-----------------CCcceEEEEECHHHHHHHHHHH
Confidence 45677777775432222 134666666665555432 2 234 589999999999999876
Q ss_pred CCCcCcccccEEEEecCCCC
Q 002827 226 HPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 226 ~p~~~~~~V~~iITL~tPh~ 245 (876)
.+ +++|+++|.+++...
T Consensus 158 --~~-P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 158 --RH-PARVRTLVVVSGAHR 174 (343)
T ss_pred --HC-hHhhheEEEECcccc
Confidence 22 567999999987644
No 40
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.57 E-value=3.8e-07 Score=99.26 Aligned_cols=103 Identities=26% Similarity=0.333 Sum_probs=67.3
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccC
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~S 161 (876)
++.||||+||+.|+...|+.++..|.+.|+ ++++|+.....
T Consensus 130 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~---------------------------------------v~~~d~~g~G~ 170 (371)
T PRK14875 130 DGTPVVLIHGFGGDLNNWLFNHAALAAGRP---------------------------------------VIALDLPGHGA 170 (371)
T ss_pred CCCeEEEECCCCCccchHHHHHHHHhcCCE---------------------------------------EEEEcCCCCCC
Confidence 467899999999999999999887765432 23333332211
Q ss_pred c---cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEE
Q 002827 162 A---MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVL 238 (876)
Q Consensus 162 A---~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iI 238 (876)
. .....+.+.++.+.+.+ +.++ +++++||||||||.+|..++.. + +++++++|
T Consensus 171 s~~~~~~~~~~~~~~~~~~~~----~~~~-----------------~~~~~lvG~S~Gg~~a~~~a~~--~-~~~v~~lv 226 (371)
T PRK14875 171 SSKAVGAGSLDELAAAVLAFL----DALG-----------------IERAHLVGHSMGGAVALRLAAR--A-PQRVASLT 226 (371)
T ss_pred CCCCCCCCCHHHHHHHHHHHH----HhcC-----------------CccEEEEeechHHHHHHHHHHh--C-chheeEEE
Confidence 1 01123555554444433 2222 3579999999999999987752 2 45699999
Q ss_pred EecCCCCCC
Q 002827 239 TLSSPHQSP 247 (876)
Q Consensus 239 TL~tPh~~p 247 (876)
.++++...+
T Consensus 227 ~~~~~~~~~ 235 (371)
T PRK14875 227 LIAPAGLGP 235 (371)
T ss_pred EECcCCcCc
Confidence 998664433
No 41
>PRK05855 short chain dehydrogenase; Validated
Probab=98.54 E-value=5.2e-07 Score=103.76 Aligned_cols=103 Identities=17% Similarity=0.234 Sum_probs=69.8
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccC
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~S 161 (876)
++.||||+||+.++...|+.+...+.+. +.++++|+.+...
T Consensus 24 ~~~~ivllHG~~~~~~~w~~~~~~L~~~---------------------------------------~~Vi~~D~~G~G~ 64 (582)
T PRK05855 24 DRPTVVLVHGYPDNHEVWDGVAPLLADR---------------------------------------FRVVAYDVRGAGR 64 (582)
T ss_pred CCCeEEEEcCCCchHHHHHHHHHHhhcc---------------------------------------eEEEEecCCCCCC
Confidence 3679999999999999999988766433 3445555544321
Q ss_pred c-----cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccE
Q 002827 162 A-----MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVET 236 (876)
Q Consensus 162 A-----~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~ 236 (876)
. -.+.++.++++-+.++++.+ + ..++++||||||||++|..++..+.+ ++.+..
T Consensus 65 S~~~~~~~~~~~~~~a~dl~~~i~~l----~----------------~~~~~~lvGhS~Gg~~a~~~a~~~~~-~~~v~~ 123 (582)
T PRK05855 65 SSAPKRTAAYTLARLADDFAAVIDAV----S----------------PDRPVHLLAHDWGSIQGWEAVTRPRA-AGRIAS 123 (582)
T ss_pred CCCCCcccccCHHHHHHHHHHHHHHh----C----------------CCCcEEEEecChHHHHHHHHHhCccc-hhhhhh
Confidence 1 11235777777777777643 1 12469999999999999888776554 445666
Q ss_pred EEEecCCC
Q 002827 237 VLTLSSPH 244 (876)
Q Consensus 237 iITL~tPh 244 (876)
++.+++|+
T Consensus 124 ~~~~~~~~ 131 (582)
T PRK05855 124 FTSVSGPS 131 (582)
T ss_pred heeccCCc
Confidence 66666554
No 42
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.53 E-value=1.4e-07 Score=104.45 Aligned_cols=108 Identities=28% Similarity=0.298 Sum_probs=68.2
Q ss_pred cCCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc
Q 002827 81 LNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (876)
Q Consensus 81 l~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~ 160 (876)
..+.|||+|||+.+|..+|+.+...+.+.+ ++.++++|+-+.+
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~-------------------------------------~~~v~aiDl~G~g 98 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAK-------------------------------------GLRVLAIDLPGHG 98 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhcccccccc-------------------------------------ceEEEEEecCCCC
Confidence 578899999999999999998877555431 3556666666633
Q ss_pred -CccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEE-
Q 002827 161 -SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVL- 238 (876)
Q Consensus 161 -SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iI- 238 (876)
++-......=|++-..+.|+.+...|. -++++||||||||+||..++. .| ++.|+.+|
T Consensus 99 ~~s~~~~~~~y~~~~~v~~i~~~~~~~~-----------------~~~~~lvghS~Gg~va~~~Aa--~~-P~~V~~lv~ 158 (326)
T KOG1454|consen 99 YSSPLPRGPLYTLRELVELIRRFVKEVF-----------------VEPVSLVGHSLGGIVALKAAA--YY-PETVDSLVL 158 (326)
T ss_pred cCCCCCCCCceehhHHHHHHHHHHHhhc-----------------CcceEEEEeCcHHHHHHHHHH--hC-cccccceee
Confidence 111111111122222233344444433 246999999999999999886 23 56799999
Q ss_pred --EecCCCC
Q 002827 239 --TLSSPHQ 245 (876)
Q Consensus 239 --TL~tPh~ 245 (876)
.+++|-.
T Consensus 159 ~~~~~~~~~ 167 (326)
T KOG1454|consen 159 LDLLGPPVY 167 (326)
T ss_pred ecccccccc
Confidence 5554433
No 43
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.53 E-value=6.4e-07 Score=101.32 Aligned_cols=36 Identities=28% Similarity=0.509 Sum_probs=28.9
Q ss_pred CceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCC
Q 002827 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSP 243 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tP 243 (876)
.++++|+||||||.+|..++.. + ++.|+++|.++++
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~--~-p~~v~~lvl~~p~ 210 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALK--H-PEHVQHLILVGPA 210 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHh--C-chhhcEEEEECCc
Confidence 3579999999999999987762 2 5679999988743
No 44
>PRK10985 putative hydrolase; Provisional
Probab=98.52 E-value=3.4e-07 Score=99.98 Aligned_cols=39 Identities=18% Similarity=0.235 Sum_probs=29.3
Q ss_pred ceEEEEEechhHHHHHHHHh-CCCcCcccccEEEEecCCCCC
Q 002827 206 KSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSPHQS 246 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~-~p~~~~~~V~~iITL~tPh~~ 246 (876)
.++++|||||||.++..++. .+. ...+.++|++++|+..
T Consensus 131 ~~~~~vG~S~GG~i~~~~~~~~~~--~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 131 VPTAAVGYSLGGNMLACLLAKEGD--DLPLDAAVIVSAPLML 170 (324)
T ss_pred CCEEEEEecchHHHHHHHHHhhCC--CCCccEEEEEcCCCCH
Confidence 47999999999987666554 221 2248999999998864
No 45
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.48 E-value=1.2e-06 Score=94.56 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=62.8
Q ss_pred CcEEEecCCccc----HHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCc
Q 002827 84 VPVLFIPGNAGS----YKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE 159 (876)
Q Consensus 84 ~PVlFIHG~~GS----~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE 159 (876)
.+|||+||+++. .+.|+.+++.+++. ++.+++.|+...
T Consensus 26 ~~VlllHG~g~~~~~~~~~~~~la~~La~~--------------------------------------Gy~Vl~~Dl~G~ 67 (266)
T TIGR03101 26 GVVIYLPPFAEEMNKSRRMVALQARAFAAG--------------------------------------GFGVLQIDLYGC 67 (266)
T ss_pred eEEEEECCCcccccchhHHHHHHHHHHHHC--------------------------------------CCEEEEECCCCC
Confidence 458899998763 56778788777642 233334444332
Q ss_pred cCc---cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccE
Q 002827 160 HSA---MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVET 236 (876)
Q Consensus 160 ~SA---~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~ 236 (876)
... .......+.++.+.++++++.++. .++++|+||||||.+|..++.. + ++.+++
T Consensus 68 G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~------------------~~~v~LvG~SmGG~vAl~~A~~--~-p~~v~~ 126 (266)
T TIGR03101 68 GDSAGDFAAARWDVWKEDVAAAYRWLIEQG------------------HPPVTLWGLRLGALLALDAANP--L-AAKCNR 126 (266)
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHhcC------------------CCCEEEEEECHHHHHHHHHHHh--C-ccccce
Confidence 111 111234455566666777664321 3579999999999999987652 2 456899
Q ss_pred EEEecC
Q 002827 237 VLTLSS 242 (876)
Q Consensus 237 iITL~t 242 (876)
+|.+++
T Consensus 127 lVL~~P 132 (266)
T TIGR03101 127 LVLWQP 132 (266)
T ss_pred EEEecc
Confidence 999873
No 46
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.47 E-value=4.8e-07 Score=106.14 Aligned_cols=125 Identities=14% Similarity=0.203 Sum_probs=84.4
Q ss_pred CCCceEEEeeeCCcccchHHhhhccCCCcEEEecCCcccHHhHH-----HHHHHHHHHhcCCCCccchhhhhhhccccCC
Q 002827 57 SARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPGNAGSYKQVR-----SLAAESDRAYQGGPLEHSFYQEASLTLEEGG 131 (876)
Q Consensus 57 ~~kY~LYlYrEg~~~~~~~~~~~~l~g~PVlFIHG~~GS~kqwr-----sia~~ls~~y~~~~~~~~~~~~~~i~p~~~~ 131 (876)
.....|+.|.-. ..+..+.|||+|||....+.-|. |+++.+.+
T Consensus 171 ~~~~eLi~Y~P~---------t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~----------------------- 218 (532)
T TIGR01838 171 NELFQLIQYEPT---------TETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVE----------------------- 218 (532)
T ss_pred CCcEEEEEeCCC---------CCcCCCCcEEEECcccccceeeecccchHHHHHHHH-----------------------
Confidence 467899999432 11346799999999877766663 66654432
Q ss_pred cccccccccccCccccceeEEEecCCCccCccchhhHHHHHH-HHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEE
Q 002827 132 VNIDASIFHSSNQYTRRLDWFAVDLEGEHSAMDGQILEEHAE-YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVIL 210 (876)
Q Consensus 132 ~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA~~G~tL~dQAe-yvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViL 210 (876)
.++++|++|+.+...+..+..+.++++ .+.++|+.|++..+ .+++++
T Consensus 219 ---------------qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g-----------------~~kv~l 266 (532)
T TIGR01838 219 ---------------QGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITG-----------------EKQVNC 266 (532)
T ss_pred ---------------CCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcC-----------------CCCeEE
Confidence 257899999987544433345667764 57888888876543 468999
Q ss_pred EEechhHHHHHHHHh-CCCcC-cccccEEEEecCCCC
Q 002827 211 VGHSVGGFVARAAII-HPLLR-KSAVETVLTLSSPHQ 245 (876)
Q Consensus 211 VGHSMGGiVAr~~l~-~p~~~-~~~V~~iITL~tPh~ 245 (876)
|||||||.++..++. +.... +++|+++++++||..
T Consensus 267 vG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 267 VGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred EEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 999999988532111 11111 457999999998854
No 47
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.44 E-value=2.8e-06 Score=90.86 Aligned_cols=106 Identities=17% Similarity=0.096 Sum_probs=67.3
Q ss_pred CCCcEEEecCCc----ccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCC
Q 002827 82 NGVPVLFIPGNA----GSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLE 157 (876)
Q Consensus 82 ~g~PVlFIHG~~----GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFn 157 (876)
++.+||++||.. |++++|..+++.+++. ++.++++|+.
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~--------------------------------------G~~v~~~Dl~ 66 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEA--------------------------------------GFPVLRFDYR 66 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHC--------------------------------------CCEEEEeCCC
Confidence 346788888744 6777787778776542 3445555555
Q ss_pred CccCccch-hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccE
Q 002827 158 GEHSAMDG-QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVET 236 (876)
Q Consensus 158 EE~SA~~G-~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~ 236 (876)
+....-.. ..+.+..+-+.++++++.+.+. ..++++++||||||.+|..++..+ ..|++
T Consensus 67 G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~----------------g~~~i~l~G~S~Gg~~a~~~a~~~----~~v~~ 126 (274)
T TIGR03100 67 GMGDSEGENLGFEGIDADIAAAIDAFREAAP----------------HLRRIVAWGLCDAASAALLYAPAD----LRVAG 126 (274)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHhhCC----------------CCCcEEEEEECHHHHHHHHHhhhC----CCccE
Confidence 43321110 2344445556666666543321 135799999999999999886532 46999
Q ss_pred EEEecCCCC
Q 002827 237 VLTLSSPHQ 245 (876)
Q Consensus 237 iITL~tPh~ 245 (876)
+|+++++..
T Consensus 127 lil~~p~~~ 135 (274)
T TIGR03100 127 LVLLNPWVR 135 (274)
T ss_pred EEEECCccC
Confidence 999986644
No 48
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.44 E-value=4.3e-07 Score=99.98 Aligned_cols=57 Identities=16% Similarity=0.269 Sum_probs=43.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCce-EEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCC
Q 002827 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKS-VILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPH 244 (876)
Q Consensus 166 ~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~-ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh 244 (876)
.+++++++.+.+.++.+ + .++ ++||||||||++|+.++.. + ++.|+++|.++++.
T Consensus 107 ~~~~~~~~~~~~~~~~l----~-----------------~~~~~~l~G~S~Gg~ia~~~a~~--~-p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 107 ITIRDDVKAQKLLLDHL----G-----------------IEQIAAVVGGSMGGMQALEWAID--Y-PERVRAIVVLATSA 162 (351)
T ss_pred CcHHHHHHHHHHHHHHc----C-----------------CCCceEEEEECHHHHHHHHHHHH--C-hHhhheEEEEccCC
Confidence 46888888877666542 2 245 9999999999999997762 2 56799999999765
Q ss_pred CC
Q 002827 245 QS 246 (876)
Q Consensus 245 ~~ 246 (876)
..
T Consensus 163 ~~ 164 (351)
T TIGR01392 163 RH 164 (351)
T ss_pred cC
Confidence 43
No 49
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.43 E-value=1.1e-06 Score=114.97 Aligned_cols=109 Identities=20% Similarity=0.276 Sum_probs=68.3
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccC
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~S 161 (876)
.+.||||+||+.|+.+.|+.++..+.+.|+. +.++..|++ ..... +-..+..
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~~~rV------------i~~Dl~G~G------------~S~~~----~~~~~~~ 1421 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISGSARC------------ISIDLPGHG------------GSKIQ----NHAKETQ 1421 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCCCEE------------EEEcCCCCC------------CCCCc----ccccccc
Confidence 4578999999999999999999888765432 112222221 11000 0000000
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 162 AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 162 A~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
.-...+++++++.+...++.+ + .++++||||||||.+|..++. .+ +++|+++|.++
T Consensus 1422 ~~~~~si~~~a~~l~~ll~~l----~-----------------~~~v~LvGhSmGG~iAl~~A~--~~-P~~V~~lVlis 1477 (1655)
T PLN02980 1422 TEPTLSVELVADLLYKLIEHI----T-----------------PGKVTLVGYSMGARIALYMAL--RF-SDKIEGAVIIS 1477 (1655)
T ss_pred ccccCCHHHHHHHHHHHHHHh----C-----------------CCCEEEEEECHHHHHHHHHHH--hC-hHhhCEEEEEC
Confidence 001234677777776665532 1 358999999999999999775 22 46799999887
Q ss_pred C
Q 002827 242 S 242 (876)
Q Consensus 242 t 242 (876)
+
T Consensus 1478 ~ 1478 (1655)
T PLN02980 1478 G 1478 (1655)
T ss_pred C
Confidence 5
No 50
>PLN02872 triacylglycerol lipase
Probab=98.38 E-value=2.5e-07 Score=104.94 Aligned_cols=136 Identities=21% Similarity=0.186 Sum_probs=78.3
Q ss_pred CCCCceEEEeeeCCcccchHHhhhccCCCcEEEecCCcccHHhH------HHHHHHHHHH-hcCCCCccchhhhhhhccc
Q 002827 56 SSARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPGNAGSYKQV------RSLAAESDRA-YQGGPLEHSFYQEASLTLE 128 (876)
Q Consensus 56 ~~~kY~LYlYrEg~~~~~~~~~~~~l~g~PVlFIHG~~GS~kqw------rsia~~ls~~-y~~~~~~~~~~~~~~i~p~ 128 (876)
....|.|-++|=.... .......++||+|+||+.++...| +++|..|++. |.. ..++
T Consensus 51 T~DGy~L~l~ri~~~~----~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV------------~l~n 114 (395)
T PLN02872 51 TKDGYLLALQRVSSRN----PRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDV------------WVGN 114 (395)
T ss_pred CCCCcEEEEEEcCCCC----CCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCc------------cccc
Confidence 3556888887631100 001113467899999999999998 3566555542 321 1111
Q ss_pred cCCcccccccccccCccccceeEEEecCCCccCccchhhHHHHH-HHHHHHHHHHHHHhccchhhhhhccccCCCCCCce
Q 002827 129 EGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSAMDGQILEEHA-EYVVYAIHRILDQYRESQDAREREGAATSGSLPKS 207 (876)
Q Consensus 129 ~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA~~G~tL~dQA-eyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ 207 (876)
.+|+.. + .+ + .+..+....+..-...++| +-+.++|++|++.. .++
T Consensus 115 ~RG~~~---s-----~g--h-----~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~------------------~~~ 161 (395)
T PLN02872 115 VRGTRW---S-----YG--H-----VTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT------------------NSK 161 (395)
T ss_pred cccccc---c-----cC--C-----CCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc------------------CCc
Confidence 122110 0 00 0 0001111112223466777 57888888886431 257
Q ss_pred EEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 208 VILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 208 ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
+++|||||||.++..++.+|++ .++|+.++.++
T Consensus 162 v~~VGhS~Gg~~~~~~~~~p~~-~~~v~~~~~l~ 194 (395)
T PLN02872 162 IFIVGHSQGTIMSLAALTQPNV-VEMVEAAALLC 194 (395)
T ss_pred eEEEEECHHHHHHHHHhhChHH-HHHHHHHHHhc
Confidence 9999999999999988877765 35688877776
No 51
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.38 E-value=2.4e-06 Score=92.19 Aligned_cols=107 Identities=18% Similarity=0.089 Sum_probs=67.2
Q ss_pred cCCCcEEEecCCcccH-HhHHH-HHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCC
Q 002827 81 LNGVPVLFIPGNAGSY-KQVRS-LAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG 158 (876)
Q Consensus 81 l~g~PVlFIHG~~GS~-kqwrs-ia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnE 158 (876)
..++++|+|||+.|+. ..|.. ++..+... .++.++++|+..
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~-------------------------------------~~~nVi~vD~~~ 76 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSR-------------------------------------GDYNVIVVDWGR 76 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhc-------------------------------------CCCEEEEEECcc
Confidence 3456799999999987 67754 33322210 135678888765
Q ss_pred ccCccch---hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCccccc
Q 002827 159 EHSAMDG---QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVE 235 (876)
Q Consensus 159 E~SA~~G---~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~ 235 (876)
-.+..+. ..+...++.+.+.|+.+.+.++ ..++++++|||||||.||..+... + +++|+
T Consensus 77 ~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g---------------~~~~~i~lIGhSlGa~vAg~~a~~--~-~~~v~ 138 (275)
T cd00707 77 GANPNYPQAVNNTRVVGAELAKFLDFLVDNTG---------------LSLENVHLIGHSLGAHVAGFAGKR--L-NGKLG 138 (275)
T ss_pred ccccChHHHHHhHHHHHHHHHHHHHHHHHhcC---------------CChHHEEEEEecHHHHHHHHHHHH--h-cCccc
Confidence 3111111 1233334556666666554322 125689999999999999998762 2 34799
Q ss_pred EEEEecC
Q 002827 236 TVLTLSS 242 (876)
Q Consensus 236 ~iITL~t 242 (876)
+|+.|.+
T Consensus 139 ~iv~LDP 145 (275)
T cd00707 139 RITGLDP 145 (275)
T ss_pred eeEEecC
Confidence 9999973
No 52
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.37 E-value=3.3e-06 Score=97.13 Aligned_cols=108 Identities=17% Similarity=0.083 Sum_probs=69.8
Q ss_pred cCCCcEEEecCCcccH--HhHHH-HHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCC
Q 002827 81 LNGVPVLFIPGNAGSY--KQVRS-LAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLE 157 (876)
Q Consensus 81 l~g~PVlFIHG~~GS~--kqwrs-ia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFn 157 (876)
..++|+|+|||+.++. +.|.. +++.+... ...+.++++|..
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~------------------------------------~~d~nVI~VDw~ 82 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYER------------------------------------EPSANVIVVDWL 82 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhc------------------------------------cCCCEEEEEECC
Confidence 4678999999998753 45554 44333210 013567788887
Q ss_pred CccCccch---hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccc
Q 002827 158 GEHSAMDG---QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAV 234 (876)
Q Consensus 158 EE~SA~~G---~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V 234 (876)
......+. ......++.+.+.|+++.+.++ -..++|+||||||||.||-.+... .+++|
T Consensus 83 g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~g---------------l~l~~VhLIGHSLGAhIAg~ag~~---~p~rV 144 (442)
T TIGR03230 83 SRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFN---------------YPWDNVHLLGYSLGAHVAGIAGSL---TKHKV 144 (442)
T ss_pred CcCCCCCccccccHHHHHHHHHHHHHHHHHhhC---------------CCCCcEEEEEECHHHHHHHHHHHh---CCcce
Confidence 54332221 1234556677777777654432 125789999999999999998752 25679
Q ss_pred cEEEEecC
Q 002827 235 ETVLTLSS 242 (876)
Q Consensus 235 ~~iITL~t 242 (876)
.+|+.|.+
T Consensus 145 ~rItgLDP 152 (442)
T TIGR03230 145 NRITGLDP 152 (442)
T ss_pred eEEEEEcC
Confidence 99999874
No 53
>PRK11071 esterase YqiA; Provisional
Probab=98.36 E-value=2.6e-06 Score=86.89 Aligned_cols=89 Identities=16% Similarity=0.219 Sum_probs=55.4
Q ss_pred CcEEEecCCcccHHhHHH--HHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccC
Q 002827 84 VPVLFIPGNAGSYKQVRS--LAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (876)
Q Consensus 84 ~PVlFIHG~~GS~kqwrs--ia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~S 161 (876)
+||||+||+.||.+.|+. ++..+++.. .++.+.+.|+...
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~------------------------------------~~~~v~~~dl~g~-- 43 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHH------------------------------------PDIEMIVPQLPPY-- 43 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhC------------------------------------CCCeEEeCCCCCC--
Confidence 479999999999999984 344443321 1345677777642
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 162 AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 162 A~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
| .+.++.+ ..+++.+. .+++++|||||||.+|..++.. +. . .+|+++
T Consensus 44 ---~---~~~~~~l----~~l~~~~~-----------------~~~~~lvG~S~Gg~~a~~~a~~--~~---~-~~vl~~ 90 (190)
T PRK11071 44 ---P---ADAAELL----ESLVLEHG-----------------GDPLGLVGSSLGGYYATWLSQC--FM---L-PAVVVN 90 (190)
T ss_pred ---H---HHHHHHH----HHHHHHcC-----------------CCCeEEEEECHHHHHHHHHHHH--cC---C-CEEEEC
Confidence 2 2223333 33333332 3579999999999999998762 21 1 346676
Q ss_pred CC
Q 002827 242 SP 243 (876)
Q Consensus 242 tP 243 (876)
++
T Consensus 91 ~~ 92 (190)
T PRK11071 91 PA 92 (190)
T ss_pred CC
Confidence 54
No 54
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.31 E-value=3.4e-06 Score=92.23 Aligned_cols=102 Identities=23% Similarity=0.293 Sum_probs=70.7
Q ss_pred CcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCcc
Q 002827 84 VPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSAM 163 (876)
Q Consensus 84 ~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA~ 163 (876)
--||++||.++++.-+..++..+.. .++++|+.|..+.+.+-
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~--------------------------------------~G~~V~~~D~RGhG~S~ 76 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAA--------------------------------------RGFDVYALDLRGHGRSP 76 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHh--------------------------------------CCCEEEEecCCCCCCCC
Confidence 3488899999999888888875542 36889999999876653
Q ss_pred ---chhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEe
Q 002827 164 ---DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (876)
Q Consensus 164 ---~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL 240 (876)
.| .+.+-++|+.+.-..+..... .....+++|+||||||+||..++. ++ +..|+++|..
T Consensus 77 r~~rg-~~~~f~~~~~dl~~~~~~~~~--------------~~~~~p~~l~gHSmGg~Ia~~~~~--~~-~~~i~~~vLs 138 (298)
T COG2267 77 RGQRG-HVDSFADYVDDLDAFVETIAE--------------PDPGLPVFLLGHSMGGLIALLYLA--RY-PPRIDGLVLS 138 (298)
T ss_pred CCCcC-CchhHHHHHHHHHHHHHHHhc--------------cCCCCCeEEEEeCcHHHHHHHHHH--hC-CccccEEEEE
Confidence 33 233345555555444322211 112468999999999999999886 23 2568888877
Q ss_pred c
Q 002827 241 S 241 (876)
Q Consensus 241 ~ 241 (876)
+
T Consensus 139 s 139 (298)
T COG2267 139 S 139 (298)
T ss_pred C
Confidence 6
No 55
>PLN02511 hydrolase
Probab=98.31 E-value=2.4e-06 Score=96.20 Aligned_cols=56 Identities=11% Similarity=0.210 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh-CCCcCcccccEEEEecCCCC
Q 002827 171 HAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 171 QAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~-~p~~~~~~V~~iITL~tPh~ 245 (876)
.++-+.++|+++...|. ..++++|||||||.++..++. +|+ ...|.+.+.+++|..
T Consensus 155 ~~~Dl~~~i~~l~~~~~-----------------~~~~~lvG~SlGg~i~~~yl~~~~~--~~~v~~~v~is~p~~ 211 (388)
T PLN02511 155 FTGDLRQVVDHVAGRYP-----------------SANLYAAGWSLGANILVNYLGEEGE--NCPLSGAVSLCNPFD 211 (388)
T ss_pred chHHHHHHHHHHHHHCC-----------------CCCEEEEEechhHHHHHHHHHhcCC--CCCceEEEEECCCcC
Confidence 34556677777766554 247999999999999888775 332 123888999987764
No 56
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.29 E-value=1.9e-06 Score=96.46 Aligned_cols=56 Identities=18% Similarity=0.246 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCce-EEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCC
Q 002827 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKS-VILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPH 244 (876)
Q Consensus 166 ~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~-ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh 244 (876)
.++.++++.+.+.++.+ + .++ +++|||||||.+|..++.. + ++.|+++|.+++..
T Consensus 127 ~~~~~~~~~~~~~l~~l----~-----------------~~~~~~lvG~S~Gg~ia~~~a~~--~-p~~v~~lvl~~~~~ 182 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL----G-----------------ITRLAAVVGGSMGGMQALEWAID--Y-PDRVRSALVIASSA 182 (379)
T ss_pred CCHHHHHHHHHHHHHHh----C-----------------CCCceEEEEECHHHHHHHHHHHh--C-hHhhhEEEEECCCc
Confidence 46888888877777653 2 345 5999999999999997762 2 56799999998755
Q ss_pred C
Q 002827 245 Q 245 (876)
Q Consensus 245 ~ 245 (876)
.
T Consensus 183 ~ 183 (379)
T PRK00175 183 R 183 (379)
T ss_pred c
Confidence 4
No 57
>PRK10566 esterase; Provisional
Probab=98.27 E-value=6.2e-06 Score=85.21 Aligned_cols=27 Identities=19% Similarity=0.064 Sum_probs=21.9
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHH
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDR 108 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~ 108 (876)
..+.|||+||+.|+..+|+.+++.+.+
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~~ 52 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALAQ 52 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHHh
Confidence 345699999999998889888887654
No 58
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.27 E-value=1.4e-06 Score=96.79 Aligned_cols=44 Identities=39% Similarity=0.526 Sum_probs=36.2
Q ss_pred ceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCCCCCcc
Q 002827 206 KSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQSPPLA 250 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~~pPva 250 (876)
+++.||||||||.++|.++..-. ....|+.++|++|||.+....
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~-~~~~V~~~~tl~tp~~Gt~~~ 170 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLG-GANRVASVVTLGTPHHGTELA 170 (336)
T ss_pred CceEEEeecccchhhHHHHhhcC-ccceEEEEEEeccCCCCchhh
Confidence 68999999999999997775221 137899999999999997554
No 59
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.27 E-value=2.7e-06 Score=97.90 Aligned_cols=65 Identities=18% Similarity=0.322 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh-CCCcCcccccEEEEecCCCCCC
Q 002827 169 EEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSPHQSP 247 (876)
Q Consensus 169 ~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~-~p~~~~~~V~~iITL~tPh~~p 247 (876)
.+..+.+.+.|+.+.+.++ .++|+||||||||.+|+.++. +|+.....|+++|++|+|+.|+
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g-----------------~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG-----------------GKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC-----------------CCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 4445566666666654443 358999999999999999775 4443346799999999999998
Q ss_pred Ccc
Q 002827 248 PLA 250 (876)
Q Consensus 248 Pva 250 (876)
|-+
T Consensus 205 ~~~ 207 (440)
T PLN02733 205 PGF 207 (440)
T ss_pred chh
Confidence 754
No 60
>COG1647 Esterase/lipase [General function prediction only]
Probab=98.26 E-value=4.8e-06 Score=87.53 Aligned_cols=106 Identities=20% Similarity=0.237 Sum_probs=65.4
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHH-hcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRA-YQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~-y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~ 160 (876)
.+..||+|||+.|+.+.+|-+|+.|.++ |-+ . .|.-. +|+...-||-
T Consensus 14 G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv----------~--aP~yp------------GHG~~~e~fl-------- 61 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVRMLGRYLNENGYTV----------Y--APRYP------------GHGTLPEDFL-------- 61 (243)
T ss_pred CCEEEEEEeccCCCcHHHHHHHHHHHHCCceE----------e--cCCCC------------CCCCCHHHHh--------
Confidence 3478999999999999999999998875 211 0 12222 2222111110
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEe
Q 002827 161 SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (876)
Q Consensus 161 SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL 240 (876)
-.+-. +-.+...+.|.+-... .-++|.++|-||||+.|..++. +|. +++||++
T Consensus 62 ----~t~~~-------DW~~~v~d~Y~~L~~~-----------gy~eI~v~GlSmGGv~alkla~--~~p---~K~iv~m 114 (243)
T COG1647 62 ----KTTPR-------DWWEDVEDGYRDLKEA-----------GYDEIAVVGLSMGGVFALKLAY--HYP---PKKIVPM 114 (243)
T ss_pred ----cCCHH-------HHHHHHHHHHHHHHHc-----------CCCeEEEEeecchhHHHHHHHh--hCC---ccceeee
Confidence 01112 2333334444321000 1258999999999999999886 231 8999999
Q ss_pred cCCCCC
Q 002827 241 SSPHQS 246 (876)
Q Consensus 241 ~tPh~~ 246 (876)
++|.+.
T Consensus 115 ~a~~~~ 120 (243)
T COG1647 115 CAPVNV 120 (243)
T ss_pred cCCccc
Confidence 999874
No 61
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.22 E-value=4.3e-06 Score=90.15 Aligned_cols=37 Identities=19% Similarity=0.060 Sum_probs=30.0
Q ss_pred ceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCC
Q 002827 206 KSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~ 245 (876)
+++++|||||||.+|..++.. + ++.|+++|.+++...
T Consensus 95 ~~~~lvG~S~GG~ia~~~a~~--~-p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 95 KNWLVFGGSWGSTLALAYAQT--H-PEVVTGLVLRGIFLL 131 (306)
T ss_pred CCEEEEEECHHHHHHHHHHHH--C-hHhhhhheeeccccC
Confidence 579999999999999998762 2 567999999986544
No 62
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.19 E-value=2.1e-05 Score=80.66 Aligned_cols=57 Identities=16% Similarity=0.101 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCC
Q 002827 171 HAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 171 QAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~ 245 (876)
..+.+.++|+++.+.|.. +++++.|+||||||.+|..++.. + ++.+++++.++.+..
T Consensus 75 ~~~~~~~~i~~~~~~~~i---------------d~~~i~l~G~S~Gg~~a~~~a~~--~-p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 75 EVESLHQLIDAVKANYSI---------------DPNRVYVTGLSAGGGMTAVLGCT--Y-PDVFAGGASNAGLPY 131 (212)
T ss_pred cHHHHHHHHHHHHHhcCc---------------ChhheEEEEECHHHHHHHHHHHh--C-chhheEEEeecCCcc
Confidence 355567778877666542 35689999999999998887651 1 456888888876543
No 63
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.12 E-value=1.4e-05 Score=94.01 Aligned_cols=81 Identities=19% Similarity=0.178 Sum_probs=62.9
Q ss_pred cceeEEEecCCCccCccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHH----
Q 002827 147 RRLDWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARA---- 222 (876)
Q Consensus 147 ~~~D~FavDFnEE~SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~---- 222 (876)
.++++|.+|-.+-......-+|.|+.+++.+||+.|.+.-+ .++|+++||||||.++..
T Consensus 246 qG~~VflIsW~nP~~~~r~~~ldDYv~~i~~Ald~V~~~tG-----------------~~~vnl~GyC~GGtl~a~~~a~ 308 (560)
T TIGR01839 246 NQLQVFIISWRNPDKAHREWGLSTYVDALKEAVDAVRAITG-----------------SRDLNLLGACAGGLTCAALVGH 308 (560)
T ss_pred cCCeEEEEeCCCCChhhcCCCHHHHHHHHHHHHHHHHHhcC-----------------CCCeeEEEECcchHHHHHHHHH
Confidence 37899999988755554446799999999999999976643 368999999999988886
Q ss_pred HHhCCCcCcccccEEEEecCCCCC
Q 002827 223 AIIHPLLRKSAVETVLTLSSPHQS 246 (876)
Q Consensus 223 ~l~~p~~~~~~V~~iITL~tPh~~ 246 (876)
+.. ..+.++|+.+++++||...
T Consensus 309 ~aA--~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 309 LQA--LGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred HHh--cCCCCceeeEEeeeccccc
Confidence 332 1122479999999998874
No 64
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.11 E-value=1.8e-05 Score=76.63 Aligned_cols=103 Identities=27% Similarity=0.372 Sum_probs=63.6
Q ss_pred CCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCc
Q 002827 83 GVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSA 162 (876)
Q Consensus 83 g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA 162 (876)
+.|++|+||..+++..|......+... ... ++++++|+.....+
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~-----------------------------------~~~-~~~~~~d~~g~g~s 64 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPAL-----------------------------------AAR-YRVIAPDLRGHGRS 64 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhcc-----------------------------------ccc-eEEEEecccCCCCC
Confidence 448999999999999999822211110 011 67777777743333
Q ss_pred c-chhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 163 M-DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 163 ~-~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
. .+..... + .+-+..+++.++ ..+++++||||||.++..++.. + ++.++++|.++
T Consensus 65 ~~~~~~~~~---~-~~~~~~~~~~~~-----------------~~~~~l~G~S~Gg~~~~~~~~~--~-p~~~~~~v~~~ 120 (282)
T COG0596 65 DPAGYSLSA---Y-ADDLAALLDALG-----------------LEKVVLVGHSMGGAVALALALR--H-PDRVRGLVLIG 120 (282)
T ss_pred CcccccHHH---H-HHHHHHHHHHhC-----------------CCceEEEEecccHHHHHHHHHh--c-chhhheeeEec
Confidence 2 0111111 1 233333344433 2349999999999999998762 2 34799999999
Q ss_pred CCCC
Q 002827 242 SPHQ 245 (876)
Q Consensus 242 tPh~ 245 (876)
.+..
T Consensus 121 ~~~~ 124 (282)
T COG0596 121 PAPP 124 (282)
T ss_pred CCCC
Confidence 7765
No 65
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.11 E-value=7e-06 Score=91.14 Aligned_cols=34 Identities=35% Similarity=0.584 Sum_probs=29.3
Q ss_pred CceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
.++.+||||||||.+|-.|+. .| |++|+.+|.++
T Consensus 159 L~KmilvGHSfGGYLaa~YAl--Ky-PerV~kLiLvs 192 (365)
T KOG4409|consen 159 LEKMILVGHSFGGYLAAKYAL--KY-PERVEKLILVS 192 (365)
T ss_pred CcceeEeeccchHHHHHHHHH--hC-hHhhceEEEec
Confidence 679999999999999999876 44 56799999876
No 66
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.08 E-value=2e-05 Score=87.03 Aligned_cols=109 Identities=22% Similarity=0.333 Sum_probs=71.3
Q ss_pred cCCCcEEEecCCcccHHhHHHHHHHHHHH-hcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCc
Q 002827 81 LNGVPVLFIPGNAGSYKQVRSLAAESDRA-YQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE 159 (876)
Q Consensus 81 l~g~PVlFIHG~~GS~kqwrsia~~ls~~-y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE 159 (876)
..|+-|+|+||+-.+.-.||-....++.+ |+. +-|+.+|.+. +....+.+.|
T Consensus 42 ~~gP~illlHGfPe~wyswr~q~~~la~~~~rv------------iA~DlrGyG~--------Sd~P~~~~~Y------- 94 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWYSWRHQIPGLASRGYRV------------IAPDLRGYGF--------SDAPPHISEY------- 94 (322)
T ss_pred CCCCEEEEEccCCccchhhhhhhhhhhhcceEE------------EecCCCCCCC--------CCCCCCccee-------
Confidence 46667899999999999999999988876 442 1223333221 0011112222
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEE
Q 002827 160 HSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLT 239 (876)
Q Consensus 160 ~SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iIT 239 (876)
++..+++-+ ..+++.++ -+++++|||++|++||-.++. +.+++|+++|+
T Consensus 95 -------t~~~l~~di----~~lld~Lg-----------------~~k~~lvgHDwGaivaw~la~---~~Perv~~lv~ 143 (322)
T KOG4178|consen 95 -------TIDELVGDI----VALLDHLG-----------------LKKAFLVGHDWGAIVAWRLAL---FYPERVDGLVT 143 (322)
T ss_pred -------eHHHHHHHH----HHHHHHhc-----------------cceeEEEeccchhHHHHHHHH---hChhhcceEEE
Confidence 233343333 33344443 368999999999999999775 23678999999
Q ss_pred ecCCCCCC
Q 002827 240 LSSPHQSP 247 (876)
Q Consensus 240 L~tPh~~p 247 (876)
++.|+..|
T Consensus 144 ~nv~~~~p 151 (322)
T KOG4178|consen 144 LNVPFPNP 151 (322)
T ss_pred ecCCCCCc
Confidence 99999843
No 67
>PRK11460 putative hydrolase; Provisional
Probab=98.07 E-value=4e-05 Score=80.50 Aligned_cols=120 Identities=13% Similarity=0.190 Sum_probs=66.6
Q ss_pred CCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEec-CCCccC
Q 002827 83 GVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVD-LEGEHS 161 (876)
Q Consensus 83 g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavD-FnEE~S 161 (876)
...||++||++|+..+|.+++..+.+.+.+. ..+.|. +.. +..+..+..||... +.++ .
T Consensus 16 ~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~---------~~i~~~--g~~--------~~~~~~g~~W~~~~~~~~~-~ 75 (232)
T PRK11460 16 QQLLLLFHGVGDNPVAMGEIGSWFAPAFPDA---------LVVSVG--GPE--------PSGNGAGRQWFSVQGITED-N 75 (232)
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHCCCC---------EEECCC--CCC--------CcCCCCCcccccCCCCCcc-c
Confidence 3469999999999999999999987653210 001111 000 00111233455321 1111 0
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 162 AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 162 A~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
.. ..+.+..+.+.+.++++.+.++ ..+++|+|+||||||.+|..++.. .++.+.++|.++
T Consensus 76 ~~--~~~~~~~~~l~~~i~~~~~~~~---------------~~~~~i~l~GfS~Gg~~al~~a~~---~~~~~~~vv~~s 135 (232)
T PRK11460 76 RQ--ARVAAIMPTFIETVRYWQQQSG---------------VGASATALIGFSQGAIMALEAVKA---EPGLAGRVIAFS 135 (232)
T ss_pred hH--HHHHHHHHHHHHHHHHHHHhcC---------------CChhhEEEEEECHHHHHHHHHHHh---CCCcceEEEEec
Confidence 00 1233444445555555544432 235689999999999999887642 134566777775
Q ss_pred C
Q 002827 242 S 242 (876)
Q Consensus 242 t 242 (876)
.
T Consensus 136 g 136 (232)
T PRK11460 136 G 136 (232)
T ss_pred c
Confidence 3
No 68
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.06 E-value=1.1e-05 Score=91.49 Aligned_cols=47 Identities=30% Similarity=0.529 Sum_probs=39.5
Q ss_pred CceEEEEEechhHHHHHHHHhCC--C-cCcccccEEEEecCCCCCCCccc
Q 002827 205 PKSVILVGHSVGGFVARAAIIHP--L-LRKSAVETVLTLSSPHQSPPLAL 251 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p--~-~~~~~V~~iITL~tPh~~pPvaf 251 (876)
.++|+||||||||.+++.++..- . +....|+++|++|+|+.|++-++
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs~~a~ 167 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGSPKAL 167 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCChHHH
Confidence 36899999999999999998742 1 34568999999999999987764
No 69
>PRK07581 hypothetical protein; Validated
Probab=98.06 E-value=5.7e-06 Score=90.23 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=30.6
Q ss_pred Cce-EEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCC
Q 002827 205 PKS-VILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 205 p~~-ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~ 245 (876)
.++ ++||||||||.||..++. .| +++|+++|.++|...
T Consensus 122 i~~~~~lvG~S~GG~va~~~a~--~~-P~~V~~Lvli~~~~~ 160 (339)
T PRK07581 122 IERLALVVGWSMGAQQTYHWAV--RY-PDMVERAAPIAGTAK 160 (339)
T ss_pred CCceEEEEEeCHHHHHHHHHHH--HC-HHHHhhheeeecCCC
Confidence 457 589999999999999876 23 567999999987554
No 70
>PLN00021 chlorophyllase
Probab=98.06 E-value=1.9e-05 Score=87.08 Aligned_cols=38 Identities=24% Similarity=0.275 Sum_probs=28.2
Q ss_pred CCceEEEEEechhHHHHHHHHh-CCCcC-cccccEEEEec
Q 002827 204 LPKSVILVGHSVGGFVARAAII-HPLLR-KSAVETVLTLS 241 (876)
Q Consensus 204 ~p~~ViLVGHSMGGiVAr~~l~-~p~~~-~~~V~~iITL~ 241 (876)
+++++.|+||||||.+|..++. +++.. +..+.++|.+.
T Consensus 124 d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ld 163 (313)
T PLN00021 124 DLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLD 163 (313)
T ss_pred ChhheEEEEECcchHHHHHHHhhccccccccceeeEEeec
Confidence 3578999999999999999774 33221 23578888885
No 71
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.04 E-value=1.7e-05 Score=85.86 Aligned_cols=107 Identities=23% Similarity=0.294 Sum_probs=64.6
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccC
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~S 161 (876)
.|+-+++.||.+-|.-.|.-+|+++...-++.. +.++.++|+.- . + |+-.
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~----------~a~DlRgHGeT--k-----------------~-~~e~ 122 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSKIRCRC----------LALDLRGHGET--K-----------------V-ENED 122 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhhcceeE----------EEeeccccCcc--c-----------------c-CChh
Confidence 455567789999999999999999887655421 11122333310 0 0 0011
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 162 AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 162 A~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
.++ ++. ..+|....|..+|++ .+.+|+||||||||-+|-..+... ..++ +.+++.+.
T Consensus 123 dlS---~eT---~~KD~~~~i~~~fge---------------~~~~iilVGHSmGGaIav~~a~~k-~lps-l~Gl~viD 179 (343)
T KOG2564|consen 123 DLS---LET---MSKDFGAVIKELFGE---------------LPPQIILVGHSMGGAIAVHTAASK-TLPS-LAGLVVID 179 (343)
T ss_pred hcC---HHH---HHHHHHHHHHHHhcc---------------CCCceEEEeccccchhhhhhhhhh-hchh-hhceEEEE
Confidence 233 222 334555666777874 256799999999999996655422 2233 77777764
No 72
>PRK13604 luxD acyl transferase; Provisional
Probab=98.03 E-value=4.6e-05 Score=84.11 Aligned_cols=31 Identities=16% Similarity=0.160 Sum_probs=23.9
Q ss_pred ceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 206 KSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
+++.|+||||||.+|..++..+ .++.+|..+
T Consensus 108 ~~I~LiG~SmGgava~~~A~~~-----~v~~lI~~s 138 (307)
T PRK13604 108 NNLGLIAASLSARIAYEVINEI-----DLSFLITAV 138 (307)
T ss_pred CceEEEEECHHHHHHHHHhcCC-----CCCEEEEcC
Confidence 4799999999999996666522 278877776
No 73
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.01 E-value=2.5e-05 Score=86.14 Aligned_cols=40 Identities=20% Similarity=0.224 Sum_probs=29.2
Q ss_pred CceEEEEEechhHHHHHHHHh-CCCc----CcccccEEEEecCCC
Q 002827 205 PKSVILVGHSVGGFVARAAII-HPLL----RKSAVETVLTLSSPH 244 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~-~p~~----~~~~V~~iITL~tPh 244 (876)
..+++|+||||||.+++.++. .++. +...++++|.++.+.
T Consensus 141 ~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 141 RLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred CCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccce
Confidence 357999999999999998774 3321 112588998888654
No 74
>PLN02606 palmitoyl-protein thioesterase
Probab=97.96 E-value=4.3e-05 Score=83.97 Aligned_cols=59 Identities=24% Similarity=0.345 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCc-ccccEEEEecCCCC
Q 002827 167 ILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRK-SAVETVLTLSSPHQ 245 (876)
Q Consensus 167 tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~-~~V~~iITL~tPh~ 245 (876)
.+.+|++.+-+.|+.+-.+ .+.+++||+|=||.++|.++. .++. ..|+.+||+|+||.
T Consensus 75 ~~~~Qv~~vce~l~~~~~L-------------------~~G~naIGfSQGglflRa~ie--rc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 75 PLRQQASIACEKIKQMKEL-------------------SEGYNIVAESQGNLVARGLIE--FCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred CHHHHHHHHHHHHhcchhh-------------------cCceEEEEEcchhHHHHHHHH--HCCCCCCcceEEEecCCcC
Confidence 5789999998888764222 246999999999999999997 2222 45999999999999
Q ss_pred C
Q 002827 246 S 246 (876)
Q Consensus 246 ~ 246 (876)
|
T Consensus 134 G 134 (306)
T PLN02606 134 G 134 (306)
T ss_pred C
Confidence 7
No 75
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.92 E-value=5.5e-05 Score=86.34 Aligned_cols=39 Identities=18% Similarity=0.108 Sum_probs=31.3
Q ss_pred CCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCC
Q 002827 204 LPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 204 ~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~ 245 (876)
+++++.++||||||.+|..++.. .+++|+++|++++|..
T Consensus 263 d~~ri~l~G~S~GG~~Al~~A~~---~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 263 DHTRVAAFGFRFGANVAVRLAYL---EPPRLKAVACLGPVVH 301 (414)
T ss_pred CcccEEEEEEChHHHHHHHHHHh---CCcCceEEEEECCccc
Confidence 46799999999999999987752 1356999999987753
No 76
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.90 E-value=3.9e-05 Score=83.51 Aligned_cols=107 Identities=16% Similarity=0.239 Sum_probs=61.0
Q ss_pred CCCcEEEecCCcccHH---hHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCC
Q 002827 82 NGVPVLFIPGNAGSYK---QVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG 158 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~k---qwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnE 158 (876)
.-.|||+.||.+.++. .+..+...+.+.+- +.-++.+++.+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~P------------------------------------G~yV~si~ig~ 47 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHP------------------------------------GTYVHSIEIGN 47 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHST------------------------------------T--EEE--SSS
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCC------------------------------------CceEEEEEECC
Confidence 4579999999987654 56776654443321 12234555544
Q ss_pred cc-----CccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCccc
Q 002827 159 EH-----SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSA 233 (876)
Q Consensus 159 E~-----SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~ 233 (876)
+. +++. ..+.+|.+.+-+.++.+-++ ...+++||+|=||.++|.++. .++...
T Consensus 48 ~~~~D~~~s~f-~~v~~Qv~~vc~~l~~~p~L-------------------~~G~~~IGfSQGgl~lRa~vq--~c~~~~ 105 (279)
T PF02089_consen 48 DPSEDVENSFF-GNVNDQVEQVCEQLANDPEL-------------------ANGFNAIGFSQGGLFLRAYVQ--RCNDPP 105 (279)
T ss_dssp SHHHHHHHHHH-SHHHHHHHHHHHHHHH-GGG-------------------TT-EEEEEETCHHHHHHHHHH--H-TSS-
T ss_pred CcchhhhhhHH-HHHHHHHHHHHHHHhhChhh-------------------hcceeeeeeccccHHHHHHHH--HCCCCC
Confidence 32 1222 35788888887777654221 247999999999999999997 333346
Q ss_pred ccEEEEecCCCCC
Q 002827 234 VETVLTLSSPHQS 246 (876)
Q Consensus 234 V~~iITL~tPh~~ 246 (876)
|+++||+|+||.|
T Consensus 106 V~nlISlggph~G 118 (279)
T PF02089_consen 106 VHNLISLGGPHMG 118 (279)
T ss_dssp EEEEEEES--TT-
T ss_pred ceeEEEecCcccc
Confidence 9999999999987
No 77
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=97.84 E-value=6.1e-05 Score=76.91 Aligned_cols=102 Identities=22% Similarity=0.283 Sum_probs=64.1
Q ss_pred cEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc-Ccc
Q 002827 85 PVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH-SAM 163 (876)
Q Consensus 85 PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~-SA~ 163 (876)
||+++||..|+....+.+|+.+... ...+++++..+.. ..-
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~~--------------------------------------~~~v~~i~~~~~~~~~~ 43 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPDD--------------------------------------VIGVYGIEYPGRGDDEP 43 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTTT--------------------------------------EEEEEEECSTTSCTTSH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCCC--------------------------------------eEEEEEEecCCCCCCCC
Confidence 7999999999999999999976543 1223333333221 111
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCC
Q 002827 164 DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSP 243 (876)
Q Consensus 164 ~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tP 243 (876)
.-.++++-|+...+.|+. .-. ..+++|+|||+||++|..++..-.-....|..|+.+.+|
T Consensus 44 ~~~si~~la~~y~~~I~~---~~~-----------------~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 44 PPDSIEELASRYAEAIRA---RQP-----------------EGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp EESSHHHHHHHHHHHHHH---HTS-----------------SSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred CCCCHHHHHHHHHHHhhh---hCC-----------------CCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 123566555544444432 211 128999999999999999875211123458999999975
Q ss_pred C
Q 002827 244 H 244 (876)
Q Consensus 244 h 244 (876)
.
T Consensus 104 ~ 104 (229)
T PF00975_consen 104 P 104 (229)
T ss_dssp S
T ss_pred C
Confidence 4
No 78
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.82 E-value=8.9e-05 Score=80.01 Aligned_cols=105 Identities=23% Similarity=0.359 Sum_probs=73.2
Q ss_pred CCcEEEecCCcccHHh--HHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCc-
Q 002827 83 GVPVLFIPGNAGSYKQ--VRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE- 159 (876)
Q Consensus 83 g~PVlFIHG~~GS~kq--wrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE- 159 (876)
.+|+|..||.+.+..+ .+++.+.+.+. + +--.|.+|.-+.
T Consensus 23 ~~P~ii~HGigd~c~~~~~~~~~q~l~~~--------------------------------~-----g~~v~~leig~g~ 65 (296)
T KOG2541|consen 23 PVPVIVWHGIGDSCSSLSMANLTQLLEEL--------------------------------P-----GSPVYCLEIGDGI 65 (296)
T ss_pred cCCEEEEeccCcccccchHHHHHHHHHhC--------------------------------C-----CCeeEEEEecCCc
Confidence 3899999999998888 55444433321 1 122344444332
Q ss_pred -cCccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEE
Q 002827 160 -HSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVL 238 (876)
Q Consensus 160 -~SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iI 238 (876)
.+-+ ..|.+|++-+-++|... .. .++.+++||-|=||+|||+++. ..+...|...|
T Consensus 66 ~~s~l--~pl~~Qv~~~ce~v~~m-~~------------------lsqGynivg~SQGglv~Raliq--~cd~ppV~n~I 122 (296)
T KOG2541|consen 66 KDSSL--MPLWEQVDVACEKVKQM-PE------------------LSQGYNIVGYSQGGLVARALIQ--FCDNPPVKNFI 122 (296)
T ss_pred chhhh--ccHHHHHHHHHHHHhcc-hh------------------ccCceEEEEEccccHHHHHHHH--hCCCCCcceeE
Confidence 2222 46899999998888732 11 2568999999999999999996 22234599999
Q ss_pred EecCCCCCC
Q 002827 239 TLSSPHQSP 247 (876)
Q Consensus 239 TL~tPh~~p 247 (876)
+||+||.|-
T Consensus 123 SL~gPhaG~ 131 (296)
T KOG2541|consen 123 SLGGPHAGI 131 (296)
T ss_pred eccCCcCCc
Confidence 999999974
No 79
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.79 E-value=0.00018 Score=77.52 Aligned_cols=115 Identities=19% Similarity=0.271 Sum_probs=70.4
Q ss_pred EEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCccch
Q 002827 86 VLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSAMDG 165 (876)
Q Consensus 86 VlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA~~G 165 (876)
++|||||-|--+--....+.|.+..... +...++ .-+|+.... . . .++.++ -.-
T Consensus 5 i~~IPGNPGlv~fY~~Fl~~L~~~l~~~------~~i~~i--sh~Gh~~~~------~-~--------~~~~~~---~~~ 58 (266)
T PF10230_consen 5 IVFIPGNPGLVEFYEEFLSALYEKLNPQ------FEILGI--SHAGHSTSP------S-N--------SKFSPN---GRL 58 (266)
T ss_pred EEEECCCCChHHHHHHHHHHHHHhCCCC------CeeEEe--cCCCCcCCc------c-c--------ccccCC---CCc
Confidence 7889999999888888888887653110 111000 001111000 0 0 000011 112
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 166 ~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
-+|++|.++.-+.|+.++..+.. +..+++|+|||+|+.+|+.++..-.-....|.+++.|-
T Consensus 59 ~sL~~QI~hk~~~i~~~~~~~~~---------------~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLf 119 (266)
T PF10230_consen 59 FSLQDQIEHKIDFIKELIPQKNK---------------PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLF 119 (266)
T ss_pred cCHHHHHHHHHHHHHHHhhhhcC---------------CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeC
Confidence 36999999999999988765430 13689999999999999998862111135688888775
No 80
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.79 E-value=8.4e-05 Score=73.92 Aligned_cols=72 Identities=24% Similarity=0.301 Sum_probs=47.6
Q ss_pred eeEEEecCCCcc-------CccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHH
Q 002827 149 LDWFAVDLEGEH-------SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVAR 221 (876)
Q Consensus 149 ~D~FavDFnEE~-------SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr 221 (876)
+|+++.|..+-. ..+..-+..+.++.+...+ +.++ .+++++|||||||.++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~----~~l~-----------------~~~~~~vG~S~Gg~~~~ 59 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALR----EALG-----------------IKKINLVGHSMGGMLAL 59 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHH----HHHT-----------------TSSEEEEEETHHHHHHH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHH----HHhC-----------------CCCeEEEEECCChHHHH
Confidence 355666665421 2244455666665554444 4443 24599999999999999
Q ss_pred HHHhCCCcCcccccEEEEecCCC
Q 002827 222 AAIIHPLLRKSAVETVLTLSSPH 244 (876)
Q Consensus 222 ~~l~~p~~~~~~V~~iITL~tPh 244 (876)
.++. .+ +++|+++|++++|.
T Consensus 60 ~~a~--~~-p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 60 EYAA--QY-PERVKKLVLISPPP 79 (230)
T ss_dssp HHHH--HS-GGGEEEEEEESESS
T ss_pred HHHH--HC-chhhcCcEEEeeec
Confidence 9886 22 45799999999773
No 81
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.78 E-value=0.00019 Score=76.97 Aligned_cols=35 Identities=20% Similarity=0.278 Sum_probs=27.2
Q ss_pred CceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecC
Q 002827 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~t 242 (876)
++++.++||||||.+|..++.. + ++.+++++.+++
T Consensus 137 ~~~~~~~G~S~GG~~a~~~a~~--~-p~~~~~~~~~~~ 171 (275)
T TIGR02821 137 GERQGITGHSMGGHGALVIALK--N-PDRFKSVSAFAP 171 (275)
T ss_pred CCceEEEEEChhHHHHHHHHHh--C-cccceEEEEECC
Confidence 4689999999999999987752 1 455888887754
No 82
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.76 E-value=0.00015 Score=80.01 Aligned_cols=60 Identities=25% Similarity=0.381 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCc-ccccEEEEecCCC
Q 002827 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRK-SAVETVLTLSSPH 244 (876)
Q Consensus 166 ~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~-~~V~~iITL~tPh 244 (876)
..+.+|+|.+-+.|+.+-.+ .+.+++||||=||.++|.++. .++. ..|+.+|++|+||
T Consensus 73 ~~~~~Qve~vce~l~~~~~l-------------------~~G~naIGfSQGGlflRa~ie--rc~~~p~V~nlISlggph 131 (314)
T PLN02633 73 MPLTQQAEIACEKVKQMKEL-------------------SQGYNIVGRSQGNLVARGLIE--FCDGGPPVYNYISLAGPH 131 (314)
T ss_pred eCHHHHHHHHHHHHhhchhh-------------------hCcEEEEEEccchHHHHHHHH--HCCCCCCcceEEEecCCC
Confidence 35789999999888764322 246999999999999999997 3323 4699999999999
Q ss_pred CC
Q 002827 245 QS 246 (876)
Q Consensus 245 ~~ 246 (876)
.|
T Consensus 132 ~G 133 (314)
T PLN02633 132 AG 133 (314)
T ss_pred CC
Confidence 97
No 83
>PLN02442 S-formylglutathione hydrolase
Probab=97.71 E-value=0.00053 Score=74.17 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=28.9
Q ss_pred CceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCC
Q 002827 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPH 244 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh 244 (876)
++++.|+||||||..|..++.. + ++.+++++.+++..
T Consensus 142 ~~~~~i~G~S~GG~~a~~~a~~--~-p~~~~~~~~~~~~~ 178 (283)
T PLN02442 142 TSRASIFGHSMGGHGALTIYLK--N-PDKYKSVSAFAPIA 178 (283)
T ss_pred CCceEEEEEChhHHHHHHHHHh--C-chhEEEEEEECCcc
Confidence 5689999999999999887652 2 45688888887554
No 84
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=97.69 E-value=0.00015 Score=88.61 Aligned_cols=25 Identities=16% Similarity=0.234 Sum_probs=22.5
Q ss_pred CcEEEecCCcccHHhHHHHHHHHHH
Q 002827 84 VPVLFIPGNAGSYKQVRSLAAESDR 108 (876)
Q Consensus 84 ~PVlFIHG~~GS~kqwrsia~~ls~ 108 (876)
++|+|+||+.|+.++|+.++..+.+
T Consensus 450 P~VVllHG~~g~~~~~~~lA~~La~ 474 (792)
T TIGR03502 450 PVVIYQHGITGAKENALAFAGTLAA 474 (792)
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHh
Confidence 3699999999999999999999875
No 85
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.63 E-value=0.00021 Score=78.47 Aligned_cols=101 Identities=19% Similarity=0.198 Sum_probs=66.5
Q ss_pred EEEecCCcccH-HhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCc--
Q 002827 86 VLFIPGNAGSY-KQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSA-- 162 (876)
Q Consensus 86 VlFIHG~~GS~-kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA-- 162 (876)
|+|+||.++.. -+.+++|..++. .++.+|+.|..+.+-.
T Consensus 57 v~~~HG~g~~~s~~~~~~a~~l~~--------------------------------------~g~~v~a~D~~GhG~SdG 98 (313)
T KOG1455|consen 57 VFLCHGYGEHSSWRYQSTAKRLAK--------------------------------------SGFAVYAIDYEGHGRSDG 98 (313)
T ss_pred EEEEcCCcccchhhHHHHHHHHHh--------------------------------------CCCeEEEeeccCCCcCCC
Confidence 78899988765 566667765543 2577888888775332
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh-CCCcCcccccEEEEec
Q 002827 163 MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLS 241 (876)
Q Consensus 163 ~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~-~p~~~~~~V~~iITL~ 241 (876)
++ ..+.+--..|++++++.-+.-. | +.++..+.-|.||||||.||..+.. +|+ .-+++|.++
T Consensus 99 l~-~yi~~~d~~v~D~~~~~~~i~~-----~-------~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~----~w~G~ilva 161 (313)
T KOG1455|consen 99 LH-AYVPSFDLVVDDVISFFDSIKE-----R-------EENKGLPRFLFGESMGGAVALLIALKDPN----FWDGAILVA 161 (313)
T ss_pred Cc-ccCCcHHHHHHHHHHHHHHHhh-----c-------cccCCCCeeeeecCcchHHHHHHHhhCCc----ccccceeee
Confidence 22 2344555577777776543211 1 2344568999999999999999775 554 467777765
No 86
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.36 E-value=0.0013 Score=70.92 Aligned_cols=160 Identities=14% Similarity=0.212 Sum_probs=88.3
Q ss_pred ceeEEEecCCCccCccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCC
Q 002827 148 RLDWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHP 227 (876)
Q Consensus 148 ~~D~FavDFnEE~SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p 227 (876)
+.+.|+.|+.+-+-.-+..+=...-+.+..+.+++.+.|+ ++++++|+|||||-.++..++..
T Consensus 88 n~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g----------------~~~~Iil~G~SiGt~~tv~Lasr- 150 (258)
T KOG1552|consen 88 NCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYG----------------SPERIILYGQSIGTVPTVDLASR- 150 (258)
T ss_pred cceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcC----------------CCceEEEEEecCCchhhhhHhhc-
Confidence 5667777777532222111111233455666666666663 25799999999999996666541
Q ss_pred CcCcccccEEEEecCCCCCCCcccCcchHHHHHHHHH-HHHhccccCCCCCCCCccCCCCCcceEEEEecCCCCcccCCC
Q 002827 228 LLRKSAVETVLTLSSPHQSPPLALQPSLGNYFARVND-EWRKGYEAHTTPTGHHVSNSRLSHVVVVSISAGYHDYQVRSK 306 (876)
Q Consensus 228 ~~~~~~V~~iITL~tPh~~pPvafD~~l~~~Y~~vn~-~W~~~~~~~~s~~~~~~~~~~l~~V~lvSIaGG~~D~~Vpsd 306 (876)
. + +.++|+.+ |+. ..+.-.|..+.. +|-..+.. ..+-..-+++++-|.|- .|
T Consensus 151 -~--~-~~alVL~S-Pf~-------S~~rv~~~~~~~~~~~d~f~~--------i~kI~~i~~PVLiiHgt-dD------ 203 (258)
T KOG1552|consen 151 -Y--P-LAAVVLHS-PFT-------SGMRVAFPDTKTTYCFDAFPN--------IEKISKITCPVLIIHGT-DD------ 203 (258)
T ss_pred -C--C-cceEEEec-cch-------hhhhhhccCcceEEeeccccc--------cCcceeccCCEEEEecc-cC------
Confidence 1 2 78888886 222 122222221211 23222221 01112235567777664 33
Q ss_pred CccccCCCCCCCceeeeecc---cCceee-cCCCCceeecHHHHHHHHHHHHhh
Q 002827 307 IESLDGIVPPTHGFMISSTG---MKNVWL-SMEHQAILWCNQLVVQVSHTLLSL 356 (876)
Q Consensus 307 lTsl~~lvP~t~g~tV~TTs---IPgVWv-s~DH~aIvWC~QLv~~iAr~Ll~l 356 (876)
.++|.+||..+.+.. .+-.|+ ...|-.+.--.+....+-+++-.+
T Consensus 204 -----evv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 204 -----EVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYIEHLRRFISSV 252 (258)
T ss_pred -----ceecccccHHHHHhccccCCCcEEecCCCcccccCHHHHHHHHHHHHHh
Confidence 344555555444322 223477 788999988888888888776554
No 87
>PRK10162 acetyl esterase; Provisional
Probab=97.19 E-value=0.0029 Score=69.58 Aligned_cols=106 Identities=16% Similarity=0.159 Sum_probs=62.0
Q ss_pred CcEEEecCCc---ccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc
Q 002827 84 VPVLFIPGNA---GSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (876)
Q Consensus 84 ~PVlFIHG~~---GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~ 160 (876)
+.||++||-+ |+.+.|+.+++.+++.. ++.++++|+.--.
T Consensus 82 p~vv~~HGGg~~~g~~~~~~~~~~~la~~~-------------------------------------g~~Vv~vdYrlap 124 (318)
T PRK10162 82 ATLFYLHGGGFILGNLDTHDRIMRLLASYS-------------------------------------GCTVIGIDYTLSP 124 (318)
T ss_pred CEEEEEeCCcccCCCchhhhHHHHHHHHHc-------------------------------------CCEEEEecCCCCC
Confidence 4588899944 88888988888776531 2445555555322
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhC-C--CcCcccccEE
Q 002827 161 SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH-P--LLRKSAVETV 237 (876)
Q Consensus 161 SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~-p--~~~~~~V~~i 237 (876)
..-....++| +.++++++.+.-.+ -..++++++|+||||||.+|..++.. . ...+..++++
T Consensus 125 e~~~p~~~~D----~~~a~~~l~~~~~~------------~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~ 188 (318)
T PRK10162 125 EARFPQAIEE----IVAVCCYFHQHAED------------YGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGV 188 (318)
T ss_pred CCCCCCcHHH----HHHHHHHHHHhHHH------------hCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhhe
Confidence 2222223443 34444554322110 01235789999999999988876541 1 1112468888
Q ss_pred EEecC
Q 002827 238 LTLSS 242 (876)
Q Consensus 238 ITL~t 242 (876)
|.+..
T Consensus 189 vl~~p 193 (318)
T PRK10162 189 LLWYG 193 (318)
T ss_pred EEECC
Confidence 87764
No 88
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.01 E-value=0.002 Score=82.17 Aligned_cols=101 Identities=17% Similarity=0.169 Sum_probs=64.1
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc-
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH- 160 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~- 160 (876)
.+.|++++||..|+...|+.+++.+...+ .++++|.....
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~~~---------------------------------------~v~~~~~~g~~~ 1107 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDPQW---------------------------------------SIYGIQSPRPDG 1107 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCCCC---------------------------------------cEEEEECCCCCC
Confidence 45789999999999999999988665432 22222222110
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh-CCCcCcccccEEEE
Q 002827 161 SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLT 239 (876)
Q Consensus 161 SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~-~p~~~~~~V~~iIT 239 (876)
......++.+.|+.+.+.++.+ .. ..+++++||||||.+|..++. .++ .+..+..++.
T Consensus 1108 ~~~~~~~l~~la~~~~~~i~~~---~~-----------------~~p~~l~G~S~Gg~vA~e~A~~l~~-~~~~v~~l~l 1166 (1296)
T PRK10252 1108 PMQTATSLDEVCEAHLATLLEQ---QP-----------------HGPYHLLGYSLGGTLAQGIAARLRA-RGEEVAFLGL 1166 (1296)
T ss_pred CCCCCCCHHHHHHHHHHHHHhh---CC-----------------CCCEEEEEechhhHHHHHHHHHHHH-cCCceeEEEE
Confidence 0111235666666655555432 11 237999999999999999765 222 2457888888
Q ss_pred ecC
Q 002827 240 LSS 242 (876)
Q Consensus 240 L~t 242 (876)
+++
T Consensus 1167 ~~~ 1169 (1296)
T PRK10252 1167 LDT 1169 (1296)
T ss_pred ecC
Confidence 775
No 89
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=96.98 E-value=0.0036 Score=63.27 Aligned_cols=101 Identities=22% Similarity=0.261 Sum_probs=62.8
Q ss_pred EEEecC---CcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCc
Q 002827 86 VLFIPG---NAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSA 162 (876)
Q Consensus 86 VlFIHG---~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA 162 (876)
|||+|| ..|+.+.-..+++.+++. .++.++.+|++--..+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~-------------------------------------~g~~v~~~~Yrl~p~~ 43 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAE-------------------------------------RGFVVVSIDYRLAPEA 43 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHH-------------------------------------HTSEEEEEE---TTTS
T ss_pred CEEECCcccccCChHHHHHHHHHHHhh-------------------------------------ccEEEEEeeccccccc
Confidence 789999 447777776666665542 1355666766632222
Q ss_pred cchhhHHHHHHHHHHHHHHHHHH---hccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhC-CCcCcccccEEE
Q 002827 163 MDGQILEEHAEYVVYAIHRILDQ---YRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH-PLLRKSAVETVL 238 (876)
Q Consensus 163 ~~G~tL~dQAeyvn~aI~~IL~l---Y~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~-p~~~~~~V~~iI 238 (876)
...++.+-+.++++++++. |+ .++++|+|+|||.||.+|..++.. .+.....+++++
T Consensus 44 ----~~p~~~~D~~~a~~~l~~~~~~~~---------------~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~ 104 (211)
T PF07859_consen 44 ----PFPAALEDVKAAYRWLLKNADKLG---------------IDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGII 104 (211)
T ss_dssp ----STTHHHHHHHHHHHHHHHTHHHHT---------------EEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEE
T ss_pred ----cccccccccccceeeecccccccc---------------ccccceEEeecccccchhhhhhhhhhhhcccchhhhh
Confidence 2345666788888888765 22 126799999999999998887642 111123488999
Q ss_pred EecC
Q 002827 239 TLSS 242 (876)
Q Consensus 239 TL~t 242 (876)
.++.
T Consensus 105 ~~~p 108 (211)
T PF07859_consen 105 LISP 108 (211)
T ss_dssp EESC
T ss_pred cccc
Confidence 8874
No 90
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.94 E-value=0.0068 Score=64.41 Aligned_cols=37 Identities=22% Similarity=0.250 Sum_probs=27.7
Q ss_pred CceEEEEEechhHHHHHHHHhCC-CcC-----cccccEEEEec
Q 002827 205 PKSVILVGHSVGGFVARAAIIHP-LLR-----KSAVETVLTLS 241 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p-~~~-----~~~V~~iITL~ 241 (876)
.++|+|+|||||+.|.+.++..- ... ...+..||.++
T Consensus 92 ~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~A 134 (233)
T PF05990_consen 92 IKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAA 134 (233)
T ss_pred CceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEEC
Confidence 57999999999999999987521 111 23678888887
No 91
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.89 E-value=0.0044 Score=69.31 Aligned_cols=81 Identities=21% Similarity=0.180 Sum_probs=44.8
Q ss_pred ceeEEEecCCCccCccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCC
Q 002827 148 RLDWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHP 227 (876)
Q Consensus 148 ~~D~FavDFnEE~SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p 227 (876)
...++.||........+... ...++-|-+.|..++...... .+.++++++|||||+|+-||=.+-..-
T Consensus 104 d~NVI~VDWs~~a~~~Y~~a-~~n~~~vg~~la~~l~~L~~~-----------~g~~~~~ihlIGhSLGAHvaG~aG~~~ 171 (331)
T PF00151_consen 104 DYNVIVVDWSRGASNNYPQA-VANTRLVGRQLAKFLSFLINN-----------FGVPPENIHLIGHSLGAHVAGFAGKYL 171 (331)
T ss_dssp -EEEEEEE-HHHHSS-HHHH-HHHHHHHHHHHHHHHHHHHHH-----------H---GGGEEEEEETCHHHHHHHHHHHT
T ss_pred CceEEEEcchhhccccccch-hhhHHHHHHHHHHHHHHHHhh-----------cCCChhHEEEEeeccchhhhhhhhhhc
Confidence 46788898876555444332 223344444444433332210 012368999999999999998877621
Q ss_pred CcCcccccEEEEec
Q 002827 228 LLRKSAVETVLTLS 241 (876)
Q Consensus 228 ~~~~~~V~~iITL~ 241 (876)
.- ..+|..|+-|-
T Consensus 172 ~~-~~ki~rItgLD 184 (331)
T PF00151_consen 172 KG-GGKIGRITGLD 184 (331)
T ss_dssp TT----SSEEEEES
T ss_pred cC-cceeeEEEecC
Confidence 11 35789999886
No 92
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.82 E-value=0.0031 Score=61.66 Aligned_cols=42 Identities=24% Similarity=0.264 Sum_probs=31.3
Q ss_pred CceEEEEEechhHHHHHHHHh-CCCcCcccccEEEEecCCCCC
Q 002827 205 PKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSPHQS 246 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~-~p~~~~~~V~~iITL~tPh~~ 246 (876)
..+++++||||||.+|..+.. ........+..++++++|..+
T Consensus 27 ~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 27 DYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred CCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 468999999999999998664 221112457789999977765
No 93
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.81 E-value=0.0047 Score=66.98 Aligned_cols=104 Identities=21% Similarity=0.169 Sum_probs=68.5
Q ss_pred CcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccCcc
Q 002827 84 VPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSAM 163 (876)
Q Consensus 84 ~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~SA~ 163 (876)
.|++.+||..|+--.+..++..+.+.... |-.. -+ .++. ...
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v-------~~l~-----------------a~------------g~~~--~~~ 42 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPV-------YGLQ-----------------AP------------GYGA--GEQ 42 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCcee-------eccc-----------------cC------------cccc--ccc
Confidence 36777999999999999999977654211 1000 00 0000 011
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCC
Q 002827 164 DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSP 243 (876)
Q Consensus 164 ~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tP 243 (876)
.-.++++++++..++|+.+. +-.+++|+|||+||.||..++..-.-..+.|..++.+-||
T Consensus 43 ~~~~l~~~a~~yv~~Ir~~Q--------------------P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~ 102 (257)
T COG3319 43 PFASLDDMAAAYVAAIRRVQ--------------------PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAV 102 (257)
T ss_pred ccCCHHHHHHHHHHHHHHhC--------------------CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccC
Confidence 11468888888888886541 1238999999999999999775211124579999999887
Q ss_pred CC
Q 002827 244 HQ 245 (876)
Q Consensus 244 h~ 245 (876)
-.
T Consensus 103 ~~ 104 (257)
T COG3319 103 PP 104 (257)
T ss_pred CC
Confidence 65
No 94
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=96.78 E-value=0.0028 Score=65.56 Aligned_cols=20 Identities=40% Similarity=0.675 Sum_probs=17.8
Q ss_pred ceEEEEEechhHHHHHHHHh
Q 002827 206 KSVILVGHSVGGFVARAAII 225 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~ 225 (876)
+.+.|||+||||..|..+..
T Consensus 59 ~~~~liGSSlGG~~A~~La~ 78 (187)
T PF05728_consen 59 ENVVLIGSSLGGFYATYLAE 78 (187)
T ss_pred CCeEEEEEChHHHHHHHHHH
Confidence 45999999999999998876
No 95
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=96.75 E-value=0.0096 Score=63.16 Aligned_cols=54 Identities=20% Similarity=0.338 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh-CCCcCcccccEEEEecCC
Q 002827 171 HAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSP 243 (876)
Q Consensus 171 QAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~-~p~~~~~~V~~iITL~tP 243 (876)
.++++...|+++.+.|.. ++.+|.+.|+|+||..+..++. +| +.+.++...+.+
T Consensus 77 d~~~i~~lv~~v~~~~~i---------------D~~RVyv~G~S~Gg~ma~~la~~~p----d~faa~a~~sG~ 131 (220)
T PF10503_consen 77 DVAFIAALVDYVAARYNI---------------DPSRVYVTGLSNGGMMANVLACAYP----DLFAAVAVVSGV 131 (220)
T ss_pred chhhHHHHHHhHhhhccc---------------CCCceeeEEECHHHHHHHHHHHhCC----ccceEEEeeccc
Confidence 567888999999888763 4679999999999988877664 44 446666555443
No 96
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=96.73 E-value=0.007 Score=62.52 Aligned_cols=74 Identities=23% Similarity=0.228 Sum_probs=43.5
Q ss_pred eEEEecCCCccCccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCc
Q 002827 150 DWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLL 229 (876)
Q Consensus 150 D~FavDFnEE~SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~ 229 (876)
.||-++..+.....+-..+.+-++++.+.|+...+.+ .++++|+|.|.|+||.+|..++.. +
T Consensus 65 ~Wf~~~~~~~~~~~~~~~i~~s~~~l~~li~~~~~~~----------------i~~~ri~l~GFSQGa~~al~~~l~--~ 126 (216)
T PF02230_consen 65 AWFDIYDFDPEGPEDEAGIEESAERLDELIDEEVAYG----------------IDPSRIFLGGFSQGAAMALYLALR--Y 126 (216)
T ss_dssp -SS-BSCSSSSSEB-HHHHHHHHHHHHHHHHHHHHTT------------------GGGEEEEEETHHHHHHHHHHHC--T
T ss_pred ceeeccCCCcchhhhHHHHHHHHHHHHHHHHHHHHcC----------------CChhheehhhhhhHHHHHHHHHHH--c
Confidence 5554443222222233345555666666666543221 236789999999999999997752 1
Q ss_pred CcccccEEEEecC
Q 002827 230 RKSAVETVLTLSS 242 (876)
Q Consensus 230 ~~~~V~~iITL~t 242 (876)
+..+.++|.++.
T Consensus 127 -p~~~~gvv~lsG 138 (216)
T PF02230_consen 127 -PEPLAGVVALSG 138 (216)
T ss_dssp -SSTSSEEEEES-
T ss_pred -CcCcCEEEEeec
Confidence 346899999984
No 97
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=96.46 E-value=0.0045 Score=70.53 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEE-EEEechhHHHHHHHHhCCCcCcccccEEEEecCCC
Q 002827 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVI-LVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPH 244 (876)
Q Consensus 166 ~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~Vi-LVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh 244 (876)
-++.|+++.+.+.++.+ + .+++. +|||||||++|..++. .| +++|+++|.+++..
T Consensus 141 ~t~~d~~~~~~~ll~~l----g-----------------i~~~~~vvG~SmGG~ial~~a~--~~-P~~v~~lv~ia~~~ 196 (389)
T PRK06765 141 VTILDFVRVQKELIKSL----G-----------------IARLHAVMGPSMGGMQAQEWAV--HY-PHMVERMIGVIGNP 196 (389)
T ss_pred CcHHHHHHHHHHHHHHc----C-----------------CCCceEEEEECHHHHHHHHHHH--HC-hHhhheEEEEecCC
Confidence 46888888877766542 2 35665 9999999999999775 22 56799999998765
Q ss_pred CCC
Q 002827 245 QSP 247 (876)
Q Consensus 245 ~~p 247 (876)
..+
T Consensus 197 ~~~ 199 (389)
T PRK06765 197 QND 199 (389)
T ss_pred CCC
Confidence 543
No 98
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=96.46 E-value=0.018 Score=63.87 Aligned_cols=106 Identities=18% Similarity=0.231 Sum_probs=65.5
Q ss_pred cEEEecCCcccH---HhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCccC
Q 002827 85 PVLFIPGNAGSY---KQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (876)
Q Consensus 85 PVlFIHG~~GS~---kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~S 161 (876)
-||||.|+.... .....||++|.+ .++.+|.+-+.--+.
T Consensus 35 ~llfIGGLtDGl~tvpY~~~La~aL~~--------------------------------------~~wsl~q~~LsSSy~ 76 (303)
T PF08538_consen 35 ALLFIGGLTDGLLTVPYLPDLAEALEE--------------------------------------TGWSLFQVQLSSSYS 76 (303)
T ss_dssp EEEEE--TT--TT-STCHHHHHHHHT---------------------------------------TT-EEEEE--GGGBT
T ss_pred EEEEECCCCCCCCCCchHHHHHHHhcc--------------------------------------CCeEEEEEEecCccC
Confidence 499999987533 446677776522 134555555554456
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCc--CcccccEEEE
Q 002827 162 AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLL--RKSAVETVLT 239 (876)
Q Consensus 162 A~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~--~~~~V~~iIT 239 (876)
++.-..|.+-++=+.+||+|+.+.-. +....++|+|+|||-|.--+..|+..++. ....|++.|.
T Consensus 77 G~G~~SL~~D~~eI~~~v~ylr~~~~-------------g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~IL 143 (303)
T PF08538_consen 77 GWGTSSLDRDVEEIAQLVEYLRSEKG-------------GHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAIL 143 (303)
T ss_dssp TS-S--HHHHHHHHHHHHHHHHHHS-------------------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEE
T ss_pred CcCcchhhhHHHHHHHHHHHHHHhhc-------------cccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEE
Confidence 66668899999999999999865411 01124789999999999999999975543 2467999999
Q ss_pred ec
Q 002827 240 LS 241 (876)
Q Consensus 240 L~ 241 (876)
-|
T Consensus 144 QA 145 (303)
T PF08538_consen 144 QA 145 (303)
T ss_dssp EE
T ss_pred eC
Confidence 86
No 99
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.38 E-value=0.0023 Score=75.88 Aligned_cols=46 Identities=24% Similarity=0.325 Sum_probs=37.4
Q ss_pred CceEEEEEechhHHHHHHHHhC------------CCcCcccccEEEEecCCCCCCCcc
Q 002827 205 PKSVILVGHSVGGFVARAAIIH------------PLLRKSAVETVLTLSSPHQSPPLA 250 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~------------p~~~~~~V~~iITL~tPh~~pPva 250 (876)
.++|+||||||||.+++.++.. +++....|+..|++|+|+.|.|-+
T Consensus 212 gkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~Ka 269 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVPKA 269 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCCcHHH
Confidence 3689999999999999998862 233456799999999999987554
No 100
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=96.28 E-value=0.035 Score=63.97 Aligned_cols=124 Identities=15% Similarity=0.177 Sum_probs=80.6
Q ss_pred CCCCceEEEeeeCCcccchHHhhhccCCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccc
Q 002827 56 SSARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNID 135 (876)
Q Consensus 56 ~~~kY~LYlYrEg~~~~~~~~~~~~l~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e 135 (876)
..++=+|+.|+-..+ ..+...+|||+++=..|.+..- .+.+-+..
T Consensus 82 ~~~~~~L~~y~~~~~-------~~~~~~~pvLiV~Pl~g~~~~L---~RS~V~~L------------------------- 126 (406)
T TIGR01849 82 DKPFCRLIHFKRQGF-------RAELPGPAVLIVAPMSGHYATL---LRSTVEAL------------------------- 126 (406)
T ss_pred ECCCeEEEEECCCCc-------ccccCCCcEEEEcCCchHHHHH---HHHHHHHH-------------------------
Confidence 356789999943211 0011247999999998876654 22222111
Q ss_pred cccccccCccccceeEEEecCCCccCcc--ch-hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEE
Q 002827 136 ASIFHSSNQYTRRLDWFAVDLEGEHSAM--DG-QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVG 212 (876)
Q Consensus 136 ~~~~~l~~~~~~~~D~FavDFnEE~SA~--~G-~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVG 212 (876)
..++|+|.+|-.+-...- +| -.|+|+.+|+.++|+.+ + ++ ++++|
T Consensus 127 ----------l~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G-----------------~~-v~l~G 174 (406)
T TIGR01849 127 ----------LPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL----G-----------------PD-IHVIA 174 (406)
T ss_pred ----------hCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh----C-----------------CC-CcEEE
Confidence 115789999977644221 22 35899999998888765 2 34 99999
Q ss_pred echhHHHHHHHHhC-CCc-CcccccEEEEecCCCCC
Q 002827 213 HSVGGFVARAAIIH-PLL-RKSAVETVLTLSSPHQS 246 (876)
Q Consensus 213 HSMGGiVAr~~l~~-p~~-~~~~V~~iITL~tPh~~ 246 (876)
.+|||+.+.+++.. ..- .+..+++++++++|...
T Consensus 175 vCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 175 VCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred EchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccC
Confidence 99999987765542 111 14469999999988774
No 101
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.27 E-value=0.0038 Score=75.46 Aligned_cols=111 Identities=21% Similarity=0.071 Sum_probs=98.5
Q ss_pred hhhccccCcCCCceeEeeecCCCeeEccCCCccceeccCCCccccCCCCCceeEEEEeeCCCCceeEEEEEeHHHHHHHH
Q 002827 644 EHSRLCKMRCFPPVALAWDPTSGLYVFPNLFSETIIIDSSPALWSYSQGSEKTIVVLLVDPHCSYKTSVSVSVTAAASRF 723 (876)
Q Consensus 644 e~~~~~~~~~F~P~~~qw~~~~~~~~~pn~~~~~~i~~~ap~~~~~~~~~~~l~l~~~~dp~c~~~i~l~id~~~sl~~l 723 (876)
+.+..||..+||++...|....+.|++|+++.+++..+.+++.|+..+. +...+..+.+|||.+.++.-.+..+-..|.
T Consensus 618 ~~s~~lk~~~~P~~s~~~~~~iql~~~~~ly~l~iryr~~lAsfpv~~i-~l~~~~qf~~ph~~y~~~s~~sal~~~~rk 696 (973)
T KOG3724|consen 618 LISLTLKLFGFPWFSLDVLIVIQLQYQPALYALGIRYRGLLASFPVRQI-TLRLLVQFLVPHFLYLITSPLSALSGFTRK 696 (973)
T ss_pred ceeeeEEEeeCchHhhhHHhhhchhhhHhhhhhhheeehhhhhcchhHH-HHHHHHhhhhhccceeecchHHHHHHHHHH
Confidence 5567899999999999999999999999999999999999999976433 445566788999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhccCCC
Q 002827 724 LLLYGSQIAGLSVAVVFFALMRQAYAWDYYLP 755 (876)
Q Consensus 724 ~lrYr~~i~~fpv~vv~lvl~~Qf~~y~~~~~ 755 (876)
.+-|-..++++.-.||...|++|.+.++.+.+
T Consensus 697 ~li~~~f~v~~ss~vv~~~l~~q~~~~v~dpv 728 (973)
T KOG3724|consen 697 ILITARFVVFPSSKVVTPPLPEQERVQVEDPV 728 (973)
T ss_pred HHHHHHHHhhhhhhhhchhhHHHHHHhhcCCc
Confidence 99999999999999999999999999998554
No 102
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=96.21 E-value=0.0089 Score=60.81 Aligned_cols=38 Identities=24% Similarity=0.260 Sum_probs=28.9
Q ss_pred ceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCC
Q 002827 206 KSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~ 245 (876)
++++|||||+|++.+..++. .....+|.+++.+|.|-.
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~--~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLA--EQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHH--HTCCSSEEEEEEES--SC
T ss_pred CCeEEEEeCHHHHHHHHHHh--hcccccccEEEEEcCCCc
Confidence 46999999999999999884 112567999999986543
No 103
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=96.18 E-value=0.038 Score=58.86 Aligned_cols=193 Identities=18% Similarity=0.288 Sum_probs=110.9
Q ss_pred CCCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCC---
Q 002827 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG--- 158 (876)
Q Consensus 82 ~g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnE--- 158 (876)
..+-+|+.|||+|+..---.++.....+.+. .+|.++.++
T Consensus 77 S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~m-------------------------------------nv~ivsYRGYG~ 119 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLPIARVFYVNLKM-------------------------------------NVLIVSYRGYGK 119 (300)
T ss_pred CCceEEEEccCCCcccchhhHHHHHHHHcCc-------------------------------------eEEEEEeecccc
Confidence 4455999999999998888888877665432 233333332
Q ss_pred -ccCcc-chhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccE
Q 002827 159 -EHSAM-DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVET 236 (876)
Q Consensus 159 -E~SA~-~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~ 236 (876)
|++.- .|-.+..| .+|+|+..+- .-+-++++|.|-|.||.||-.++.. ..+++.+
T Consensus 120 S~GspsE~GL~lDs~-----avldyl~t~~---------------~~dktkivlfGrSlGGAvai~lask---~~~ri~~ 176 (300)
T KOG4391|consen 120 SEGSPSEEGLKLDSE-----AVLDYLMTRP---------------DLDKTKIVLFGRSLGGAVAIHLASK---NSDRISA 176 (300)
T ss_pred CCCCccccceeccHH-----HHHHHHhcCc---------------cCCcceEEEEecccCCeeEEEeecc---chhheee
Confidence 11111 12223322 3456654321 1224689999999999999887762 1457888
Q ss_pred EEEecC----CCCCCCcccCcchHHHHHHH--HHHHHhccccCCCCCCCCccCCCCCcceEEEEecCCCCcccCCCCc-c
Q 002827 237 VLTLSS----PHQSPPLALQPSLGNYFARV--NDEWRKGYEAHTTPTGHHVSNSRLSHVVVVSISAGYHDYQVRSKIE-S 309 (876)
Q Consensus 237 iITL~t----Ph~~pPvafD~~l~~~Y~~v--n~~W~~~~~~~~s~~~~~~~~~~l~~V~lvSIaGG~~D~~VpsdlT-s 309 (876)
+|.-.| ||-.-|..| |...++...+ .+-|...-. -....++.+-|+| ..|.+||+-.- .
T Consensus 177 ~ivENTF~SIp~~~i~~v~-p~~~k~i~~lc~kn~~~S~~k------------i~~~~~P~LFiSG-lkDelVPP~~Mr~ 242 (300)
T KOG4391|consen 177 IIVENTFLSIPHMAIPLVF-PFPMKYIPLLCYKNKWLSYRK------------IGQCRMPFLFISG-LKDELVPPVMMRQ 242 (300)
T ss_pred eeeechhccchhhhhheec-cchhhHHHHHHHHhhhcchhh------------hccccCceEEeec-CccccCCcHHHHH
Confidence 887544 777655543 3333444333 234532100 0122567888865 68999987532 2
Q ss_pred ccCCCCCCCceeeeecccCce--eecCCCCceeecHHHHHHHHHHHHhhc
Q 002827 310 LDGIVPPTHGFMISSTGMKNV--WLSMEHQAILWCNQLVVQVSHTLLSLI 357 (876)
Q Consensus 310 l~~lvP~t~g~tV~TTsIPgV--Wvs~DH~aIvWC~QLv~~iAr~Ll~lv 357 (876)
+-++-|.. .... +-...|..---|+--..+|+.+|.+..
T Consensus 243 Ly~~c~S~---------~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 243 LYELCPSR---------TKRLAEFPDGTHNDTWICDGYFQAIEDFLAEVV 283 (300)
T ss_pred HHHhCchh---------hhhheeCCCCccCceEEeccHHHHHHHHHHHhc
Confidence 22222221 1111 223456655559999999999999875
No 104
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=96.08 E-value=0.01 Score=68.02 Aligned_cols=81 Identities=25% Similarity=0.356 Sum_probs=66.5
Q ss_pred cceeEEEecCCCccCccchhhHHHHH-HHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh
Q 002827 147 RRLDWFAVDLEGEHSAMDGQILEEHA-EYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (876)
Q Consensus 147 ~~~D~FavDFnEE~SA~~G~tL~dQA-eyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~ 225 (876)
.++++|.+|+........-..++|+. |.+.+||+.+.+..+ .+.|++|||++||.++-.++.
T Consensus 138 ~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg-----------------~~~InliGyCvGGtl~~~ala 200 (445)
T COG3243 138 QGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITG-----------------QKDINLIGYCVGGTLLAAALA 200 (445)
T ss_pred cCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhC-----------------ccccceeeEecchHHHHHHHH
Confidence 37899999999877767678899999 999999999987755 368999999999998888776
Q ss_pred CCCcCcccccEEEEecCCCCC
Q 002827 226 HPLLRKSAVETVLTLSSPHQS 246 (876)
Q Consensus 226 ~p~~~~~~V~~iITL~tPh~~ 246 (876)
+ +...+|++++.+.||..-
T Consensus 201 ~--~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 201 L--MAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred h--hhhcccccceeeecchhh
Confidence 3 223369999999988763
No 105
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.07 E-value=0.032 Score=53.08 Aligned_cols=51 Identities=22% Similarity=0.354 Sum_probs=30.6
Q ss_pred CceEEEEEechhHHHHHHHHhC---CCcCcccccEEEEecCCCCCCCcccCcchHHHHH
Q 002827 205 PKSVILVGHSVGGFVARAAIIH---PLLRKSAVETVLTLSSPHQSPPLALQPSLGNYFA 260 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~---p~~~~~~V~~iITL~tPh~~pPvafD~~l~~~Y~ 260 (876)
+.++++.||||||.+|..+..+ ........-.+++.|+|-. .|..+.+.++
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~-----~~~~~~~~~~ 116 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV-----GNSAFAKWYD 116 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S-------BEHHHHHHHH
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc-----cCHHHHHHHH
Confidence 3689999999999998886541 1111124457788885554 3444444444
No 106
>COG0400 Predicted esterase [General function prediction only]
Probab=95.91 E-value=0.04 Score=58.09 Aligned_cols=55 Identities=20% Similarity=0.309 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh-CCCcCcccccEEEEec
Q 002827 168 LEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLS 241 (876)
Q Consensus 168 L~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~-~p~~~~~~V~~iITL~ 241 (876)
+...++-+.+.++...+.|+ .+.++++++|+|=|+.+|..+.. +| ...+++|.++
T Consensus 76 l~~~~~~~~~~l~~~~~~~g---------------i~~~~ii~~GfSqGA~ial~~~l~~~----~~~~~ail~~ 131 (207)
T COG0400 76 LDLETEKLAEFLEELAEEYG---------------IDSSRIILIGFSQGANIALSLGLTLP----GLFAGAILFS 131 (207)
T ss_pred HHHHHHHHHHHHHHHHHHhC---------------CChhheEEEecChHHHHHHHHHHhCc----hhhccchhcC
Confidence 34445555555555555554 23579999999999999999664 33 4578888876
No 107
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=95.84 E-value=0.028 Score=57.41 Aligned_cols=80 Identities=24% Similarity=0.358 Sum_probs=48.4
Q ss_pred cceeEEEecCCCccC-------ccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHH
Q 002827 147 RRLDWFAVDLEGEHS-------AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFV 219 (876)
Q Consensus 147 ~~~D~FavDFnEE~S-------A~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiV 219 (876)
+++.++.+|+..... +..|..=....+=+.++++++.+.+. .++++|.++|||+||.+
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~---------------iD~~ri~i~G~S~GG~~ 77 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYY---------------IDPDRIGIMGHSYGGYL 77 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTS---------------EEEEEEEEEEETHHHHH
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhcccc---------------ccceeEEEEcccccccc
Confidence 367777888775331 12222212223335556666655542 23689999999999999
Q ss_pred HHHHHh-CCCcCcccccEEEEecCCCC
Q 002827 220 ARAAII-HPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 220 Ar~~l~-~p~~~~~~V~~iITL~tPh~ 245 (876)
|..++. +| +.++.+|..+.+..
T Consensus 78 a~~~~~~~~----~~f~a~v~~~g~~d 100 (213)
T PF00326_consen 78 ALLAATQHP----DRFKAAVAGAGVSD 100 (213)
T ss_dssp HHHHHHHTC----CGSSEEEEESE-SS
T ss_pred cchhhcccc----eeeeeeeccceecc
Confidence 999886 44 45788888775443
No 108
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=95.78 E-value=0.07 Score=58.76 Aligned_cols=97 Identities=18% Similarity=0.283 Sum_probs=61.7
Q ss_pred EEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCc-----c
Q 002827 86 VLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE-----H 160 (876)
Q Consensus 86 VlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE-----~ 160 (876)
||=+||--||+.+.+-++..|.+. +..+..+++.+= .
T Consensus 38 Vv~~hGsPGSH~DFkYi~~~l~~~--------------------------------------~iR~I~iN~PGf~~t~~~ 79 (297)
T PF06342_consen 38 VVAFHGSPGSHNDFKYIRPPLDEA--------------------------------------GIRFIGINYPGFGFTPGY 79 (297)
T ss_pred EEEecCCCCCccchhhhhhHHHHc--------------------------------------CeEEEEeCCCCCCCCCCC
Confidence 777999999999999999876542 122222222220 0
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEe
Q 002827 161 SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (876)
Q Consensus 161 SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL 240 (876)
..+ ..+=.+-+.|++..++.| + ..+.++.+|||+||-.|..++.. + .+.+++++
T Consensus 80 ~~~-~~~n~er~~~~~~ll~~l----~----------------i~~~~i~~gHSrGcenal~la~~--~---~~~g~~li 133 (297)
T PF06342_consen 80 PDQ-QYTNEERQNFVNALLDEL----G----------------IKGKLIFLGHSRGCENALQLAVT--H---PLHGLVLI 133 (297)
T ss_pred ccc-ccChHHHHHHHHHHHHHc----C----------------CCCceEEEEeccchHHHHHHHhc--C---ccceEEEe
Confidence 000 012344567887776654 1 13689999999999988887651 1 25799999
Q ss_pred cCCCCC
Q 002827 241 SSPHQS 246 (876)
Q Consensus 241 ~tPh~~ 246 (876)
++|--.
T Consensus 134 n~~G~r 139 (297)
T PF06342_consen 134 NPPGLR 139 (297)
T ss_pred cCCccc
Confidence 875443
No 109
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=95.72 E-value=0.11 Score=54.03 Aligned_cols=50 Identities=30% Similarity=0.490 Sum_probs=38.0
Q ss_pred HHH-HHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHH-hCCCcCcccccEEEEec
Q 002827 173 EYV-VYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLS 241 (876)
Q Consensus 173 eyv-n~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l-~~p~~~~~~V~~iITL~ 241 (876)
+|+ ++.+.+|.+.|+.. +.+..|.||||||..|..++ .+| +...+++.++
T Consensus 96 ~~l~~el~p~i~~~~~~~---------------~~~~~i~G~S~GG~~Al~~~l~~P----d~F~~~~~~S 147 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTD---------------PDRRAIAGHSMGGYGALYLALRHP----DLFGAVIAFS 147 (251)
T ss_dssp HHHHTHHHHHHHHHSSEE---------------ECCEEEEEETHHHHHHHHHHHHST----TTESEEEEES
T ss_pred eehhccchhHHHHhcccc---------------cceeEEeccCCCcHHHHHHHHhCc----cccccccccC
Confidence 455 58888888888641 12289999999999999855 555 4589999998
No 110
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=95.45 E-value=0.49 Score=53.55 Aligned_cols=64 Identities=22% Similarity=0.314 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCc-ccccE-EEEecCCCC
Q 002827 168 LEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRK-SAVET-VLTLSSPHQ 245 (876)
Q Consensus 168 L~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~-~~V~~-iITL~tPh~ 245 (876)
.++-++--+.|++|+++. .++++++.+++-|||+||.|+-.++....++. +-|+- +|.--||..
T Consensus 191 ~~dLv~~~~a~v~yL~d~--------------~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfss 256 (365)
T PF05677_consen 191 RKDLVKDYQACVRYLRDE--------------EQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSS 256 (365)
T ss_pred HHHHHHHHHHHHHHHHhc--------------ccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcch
Confidence 355566667888887654 23467899999999999999888887544332 23443 333344444
No 111
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=95.44 E-value=0.067 Score=61.53 Aligned_cols=54 Identities=15% Similarity=0.246 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCC
Q 002827 174 YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 174 yvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~ 245 (876)
=+.+++++|..+|.+ .+...||.||||.+.-.|+....-+. .+.+-++++.|..
T Consensus 183 Dl~~~v~~i~~~~P~-----------------a~l~avG~S~Gg~iL~nYLGE~g~~~-~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 183 DLREVVNHIKKRYPQ-----------------APLFAVGFSMGGNILTNYLGEEGDNT-PLIAAVAVCNPWD 236 (409)
T ss_pred HHHHHHHHHHHhCCC-----------------CceEEEEecchHHHHHHHhhhccCCC-CceeEEEEeccch
Confidence 366778888888863 47999999999999998887443222 4777778887766
No 112
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.42 E-value=0.043 Score=64.97 Aligned_cols=56 Identities=14% Similarity=0.036 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCC
Q 002827 169 EEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSP 243 (876)
Q Consensus 169 ~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tP 243 (876)
.++++-+.++|+++..+.- ...+|.++||||||.+|..++.. .+..++++|..++.
T Consensus 76 ~~~~~D~~~~i~~l~~q~~----------------~~~~v~~~G~S~GG~~a~~~a~~---~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 76 SDEAADGYDLVDWIAKQPW----------------CDGNVGMLGVSYLAVTQLLAAVL---QPPALRAIAPQEGV 131 (550)
T ss_pred cccchHHHHHHHHHHhCCC----------------CCCcEEEEEeChHHHHHHHHhcc---CCCceeEEeecCcc
Confidence 3566777788888754311 12589999999999999988763 13568888876654
No 113
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.36 E-value=0.014 Score=68.96 Aligned_cols=46 Identities=28% Similarity=0.655 Sum_probs=36.2
Q ss_pred CceEEEEEechhHHHHHHHHhC------CCcC--cccccEEEEecCCCCCCCcc
Q 002827 205 PKSVILVGHSVGGFVARAAIIH------PLLR--KSAVETVLTLSSPHQSPPLA 250 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~------p~~~--~~~V~~iITL~tPh~~pPva 250 (876)
..+|+-|||||||+.|+.++.. |... -....++|.+++||+|+|++
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS~lA 578 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGSRLA 578 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCCccc
Confidence 4689999999999999997642 3221 13467899999999999987
No 114
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=95.23 E-value=0.16 Score=52.18 Aligned_cols=102 Identities=23% Similarity=0.193 Sum_probs=60.0
Q ss_pred CCcEEEecCCcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc--
Q 002827 83 GVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH-- 160 (876)
Q Consensus 83 g~PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~-- 160 (876)
.+-||++|+..|-..+.|.+|..+++. ++.+++.|+=...
T Consensus 14 ~~~Vvv~~d~~G~~~~~~~~ad~lA~~--------------------------------------Gy~v~~pD~f~~~~~ 55 (218)
T PF01738_consen 14 RPAVVVIHDIFGLNPNIRDLADRLAEE--------------------------------------GYVVLAPDLFGGRGA 55 (218)
T ss_dssp EEEEEEE-BTTBS-HHHHHHHHHHHHT--------------------------------------T-EEEEE-CCCCTS-
T ss_pred CCEEEEEcCCCCCchHHHHHHHHHHhc--------------------------------------CCCEEecccccCCCC
Confidence 345899999999999999999988763 2333333332111
Q ss_pred ---------Cccc---hhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCC
Q 002827 161 ---------SAMD---GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPL 228 (876)
Q Consensus 161 ---------SA~~---G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~ 228 (876)
.++. ....+...+-+..+++++.++- ....++|-+||.|+||.+|..++...
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~---------------~~~~~kig~vGfc~GG~~a~~~a~~~- 119 (218)
T PF01738_consen 56 PPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQP---------------EVDPGKIGVVGFCWGGKLALLLAARD- 119 (218)
T ss_dssp -CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTT---------------TCEEEEEEEEEETHHHHHHHHHHCCT-
T ss_pred CccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcc---------------ccCCCcEEEEEEecchHHhhhhhhhc-
Confidence 1111 0111223344455566654331 12357999999999999999888632
Q ss_pred cCcccccEEEEec
Q 002827 229 LRKSAVETVLTLS 241 (876)
Q Consensus 229 ~~~~~V~~iITL~ 241 (876)
..+++.+..-
T Consensus 120 ---~~~~a~v~~y 129 (218)
T PF01738_consen 120 ---PRVDAAVSFY 129 (218)
T ss_dssp ---TTSSEEEEES
T ss_pred ---cccceEEEEc
Confidence 3578777764
No 115
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.09 E-value=0.051 Score=56.67 Aligned_cols=42 Identities=29% Similarity=0.412 Sum_probs=28.7
Q ss_pred CceEEEEEechhHHHHHHHHhC-CCcCcccccEEEEecCCCCC
Q 002827 205 PKSVILVGHSVGGFVARAAIIH-PLLRKSAVETVLTLSSPHQS 246 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~-p~~~~~~V~~iITL~tPh~~ 246 (876)
..++++.||||||.+|..+... ........-.++|.|+|-.+
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg 169 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVG 169 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCC
Confidence 4689999999999999886542 11111233468888877765
No 116
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=95.07 E-value=0.12 Score=57.94 Aligned_cols=39 Identities=23% Similarity=0.441 Sum_probs=28.6
Q ss_pred CceEEEEEechhH-HHHHHHHhCCCcCcccccEEEEecCCCC
Q 002827 205 PKSVILVGHSVGG-FVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 205 p~~ViLVGHSMGG-iVAr~~l~~p~~~~~~V~~iITL~tPh~ 245 (876)
+.+...||-|||| ++|..+...- +.-.+.+-++++.|..
T Consensus 147 ~r~~~avG~SLGgnmLa~ylgeeg--~d~~~~aa~~vs~P~D 186 (345)
T COG0429 147 PRPLYAVGFSLGGNMLANYLGEEG--DDLPLDAAVAVSAPFD 186 (345)
T ss_pred CCceEEEEecccHHHHHHHHHhhc--cCcccceeeeeeCHHH
Confidence 5689999999999 7777766522 1234678888887764
No 117
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=94.91 E-value=0.043 Score=58.09 Aligned_cols=99 Identities=22% Similarity=0.284 Sum_probs=63.7
Q ss_pred CcEEEecC---CcccHHhHHHHHHHHHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCCCcc
Q 002827 84 VPVLFIPG---NAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (876)
Q Consensus 84 ~PVlFIHG---~~GS~kqwrsia~~ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~ 160 (876)
+-.+|||| ..|..+.--+++.-+.+ +++.+-.||.+
T Consensus 68 klfIfIHGGYW~~g~rk~clsiv~~a~~--------------------------------------~gY~vasvgY~--- 106 (270)
T KOG4627|consen 68 KLFIFIHGGYWQEGDRKMCLSIVGPAVR--------------------------------------RGYRVASVGYN--- 106 (270)
T ss_pred cEEEEEecchhhcCchhcccchhhhhhh--------------------------------------cCeEEEEeccC---
Confidence 44788999 34776766666664443 23444445544
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEe
Q 002827 161 SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (876)
Q Consensus 161 SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL 240 (876)
-+-.+++|.+-.+-+.+-+++|++.|+. .+.+.+-|||.|+-+|..++.. ....+|.+++.+
T Consensus 107 l~~q~htL~qt~~~~~~gv~filk~~~n----------------~k~l~~gGHSaGAHLa~qav~R--~r~prI~gl~l~ 168 (270)
T KOG4627|consen 107 LCPQVHTLEQTMTQFTHGVNFILKYTEN----------------TKVLTFGGHSAGAHLAAQAVMR--QRSPRIWGLILL 168 (270)
T ss_pred cCcccccHHHHHHHHHHHHHHHHHhccc----------------ceeEEEcccchHHHHHHHHHHH--hcCchHHHHHHH
Confidence 2233456666666666777889988873 3568899999999888887762 234456666655
Q ss_pred c
Q 002827 241 S 241 (876)
Q Consensus 241 ~ 241 (876)
+
T Consensus 169 ~ 169 (270)
T KOG4627|consen 169 C 169 (270)
T ss_pred h
Confidence 4
No 118
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=94.89 E-value=0.026 Score=64.93 Aligned_cols=49 Identities=20% Similarity=0.304 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh-CCCcCcccccEEEEec
Q 002827 175 VVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLS 241 (876)
Q Consensus 175 vn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~-~p~~~~~~V~~iITL~ 241 (876)
|-+.|++||+..+ .++++.||||-|+.+...++. .|++. .+|+..+.||
T Consensus 147 LPA~IdyIL~~T~-----------------~~kl~yvGHSQGtt~~fv~lS~~p~~~-~kI~~~~aLA 196 (403)
T KOG2624|consen 147 LPAMIDYILEKTG-----------------QEKLHYVGHSQGTTTFFVMLSERPEYN-KKIKSFIALA 196 (403)
T ss_pred HHHHHHHHHHhcc-----------------ccceEEEEEEccchhheehhcccchhh-hhhheeeeec
Confidence 6678889987643 368999999999999999775 56663 6899999997
No 119
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=94.68 E-value=0.1 Score=51.26 Aligned_cols=38 Identities=29% Similarity=0.413 Sum_probs=27.0
Q ss_pred ceEEEEEechhHHHHHHHHhC-CCcCcccccEEEEecCCC
Q 002827 206 KSVILVGHSVGGFVARAAIIH-PLLRKSAVETVLTLSSPH 244 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~~-p~~~~~~V~~iITL~tPh 244 (876)
.+++++||||||.+|..++.. ... ...+.+++.+.+..
T Consensus 64 ~~~~l~g~s~Gg~~a~~~a~~l~~~-~~~~~~l~~~~~~~ 102 (212)
T smart00824 64 RPFVLVGHSSGGLLAHAVAARLEAR-GIPPAAVVLLDTYP 102 (212)
T ss_pred CCeEEEEECHHHHHHHHHHHHHHhC-CCCCcEEEEEccCC
Confidence 468999999999999776642 211 34588888776533
No 120
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.40 E-value=0.89 Score=48.60 Aligned_cols=25 Identities=24% Similarity=0.380 Sum_probs=22.6
Q ss_pred c-EEEecCCcccHHhHHHHHHHHHHH
Q 002827 85 P-VLFIPGNAGSYKQVRSLAAESDRA 109 (876)
Q Consensus 85 P-VlFIHG~~GS~kqwrsia~~ls~~ 109 (876)
| ||.+|+..|=..+.|++|+.++..
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~ 53 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKA 53 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhC
Confidence 6 777899999999999999998874
No 121
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=94.31 E-value=0.67 Score=53.60 Aligned_cols=56 Identities=21% Similarity=0.140 Sum_probs=40.1
Q ss_pred HHHHH-HHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHH-hCCCcCcccccEEEEecCC
Q 002827 171 HAEYV-VYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLSSP 243 (876)
Q Consensus 171 QAeyv-n~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l-~~p~~~~~~V~~iITL~tP 243 (876)
..+|| .+.+-+|-+.|... .++++..|.|+||||+.|..+. .+| +....++.++.-
T Consensus 265 f~~~l~~eLlP~I~~~y~~~-------------~d~~~~~IaG~S~GGl~AL~~al~~P----d~Fg~v~s~Sgs 322 (411)
T PRK10439 265 FWLAVQQELLPQVRAIAPFS-------------DDADRTVVAGQSFGGLAALYAGLHWP----ERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHHHHhCCCC-------------CCccceEEEEEChHHHHHHHHHHhCc----ccccEEEEeccc
Confidence 33444 56667777777531 2356889999999999999865 444 568999999853
No 122
>PLN00413 triacylglycerol lipase
Probab=94.23 E-value=0.11 Score=60.66 Aligned_cols=41 Identities=32% Similarity=0.386 Sum_probs=30.0
Q ss_pred ceEEEEEechhHHHHHHHHh----C-CCcCcccccEEEEecCCCCC
Q 002827 206 KSVILVGHSVGGFVARAAII----H-PLLRKSAVETVLTLSSPHQS 246 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~----~-p~~~~~~V~~iITL~tPh~~ 246 (876)
.++++.||||||.+|..++. + +.-...++.+++|.|+|..|
T Consensus 284 ~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVG 329 (479)
T PLN00413 284 SKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVG 329 (479)
T ss_pred CeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCc
Confidence 57999999999999888653 1 11112356789999988877
No 123
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.21 E-value=0.17 Score=57.40 Aligned_cols=37 Identities=22% Similarity=0.362 Sum_probs=26.0
Q ss_pred CceEEEEEechhHHHHHHHHhC---CCcC--cccccEEEEec
Q 002827 205 PKSVILVGHSVGGFVARAAIIH---PLLR--KSAVETVLTLS 241 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~---p~~~--~~~V~~iITL~ 241 (876)
.++|+|++||||.-+++.+++. .++. +.+++.+|..+
T Consensus 190 ~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAa 231 (377)
T COG4782 190 VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAA 231 (377)
T ss_pred CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeC
Confidence 5799999999999999988752 1221 34566666554
No 124
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=94.20 E-value=0.027 Score=65.37 Aligned_cols=67 Identities=21% Similarity=0.354 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhC-C----CcCcccccEEEEecC
Q 002827 168 LEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH-P----LLRKSAVETVLTLSS 242 (876)
Q Consensus 168 L~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~-p----~~~~~~V~~iITL~t 242 (876)
.+++-+|+.+.-+.|-..|+. +..++|+||+|||||.+.+.++.. + .+....|+..+.+|.
T Consensus 158 ~e~rd~yl~kLK~~iE~~~~~--------------~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 158 SEERDQYLSKLKKKIETMYKL--------------NGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHH--------------cCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCc
Confidence 556667777776666666652 113799999999999999998852 2 233456778888887
Q ss_pred CCCCCC
Q 002827 243 PHQSPP 248 (876)
Q Consensus 243 Ph~~pP 248 (876)
|..+.|
T Consensus 224 p~lG~~ 229 (473)
T KOG2369|consen 224 PWLGSP 229 (473)
T ss_pred hhcCCh
Confidence 777754
No 125
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=93.66 E-value=0.11 Score=54.40 Aligned_cols=54 Identities=20% Similarity=0.256 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCC
Q 002827 173 EYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 173 eyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~ 245 (876)
||..+||+++.++-. ..+++|.|+|.|+||.+|..++.. + ..|+.+|.++.++.
T Consensus 4 Eyfe~Ai~~L~~~p~---------------v~~~~Igi~G~SkGaelALllAs~--~--~~i~avVa~~ps~~ 57 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPE---------------VDPDKIGIIGISKGAELALLLASR--F--PQISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHHCSTT---------------B--SSEEEEEETHHHHHHHHHHHH--S--SSEEEEEEES--SB
T ss_pred HHHHHHHHHHHhCCC---------------CCCCCEEEEEECHHHHHHHHHHhc--C--CCccEEEEeCCcee
Confidence 799999999865421 235799999999999999998872 2 25999999886554
No 126
>PLN02408 phospholipase A1
Probab=93.64 E-value=0.12 Score=58.73 Aligned_cols=59 Identities=27% Similarity=0.495 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhC--CCcCcccccEEEEecCCCCC
Q 002827 173 EYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH--PLLRKSAVETVLTLSSPHQS 246 (876)
Q Consensus 173 eyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~--p~~~~~~V~~iITL~tPh~~ 246 (876)
+-|.+.|+.+++.|++ .+.++++.||||||-+|..++.. .++.....-+++|.|+|..|
T Consensus 182 ~qVl~eI~~ll~~y~~---------------~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVG 242 (365)
T PLN02408 182 EMVREEIARLLQSYGD---------------EPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVG 242 (365)
T ss_pred HHHHHHHHHHHHhcCC---------------CCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcc
Confidence 3456667777888763 13479999999999998886541 11111113458899988876
No 127
>PLN02310 triacylglycerol lipase
Probab=93.41 E-value=0.13 Score=59.22 Aligned_cols=60 Identities=22% Similarity=0.365 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhC-CCcCcccccEEEEecCCCCC
Q 002827 174 YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH-PLLRKSAVETVLTLSSPHQS 246 (876)
Q Consensus 174 yvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~-p~~~~~~V~~iITL~tPh~~ 246 (876)
-|.+.|+.+++.|++. ....++++.||||||-+|..++.. ....+..--.++|.|+|..|
T Consensus 190 qVl~eV~~L~~~y~~~-------------~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 190 QVMQEVKRLVNFYRGK-------------GEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVG 250 (405)
T ss_pred HHHHHHHHHHHhhccc-------------CCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCcc
Confidence 3556778888888521 113589999999999998886531 01011222358999998887
No 128
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=93.37 E-value=0.071 Score=60.81 Aligned_cols=28 Identities=25% Similarity=0.388 Sum_probs=18.8
Q ss_pred CCCc-EEEecCCcccHHhHHHHHHHHHHH
Q 002827 82 NGVP-VLFIPGNAGSYKQVRSLAAESDRA 109 (876)
Q Consensus 82 ~g~P-VlFIHG~~GS~kqwrsia~~ls~~ 109 (876)
...| |||=||++|+...--.++.+|+.+
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~ 126 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASH 126 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHT
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhC
Confidence 3457 667799999999999999998875
No 129
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=93.33 E-value=0.23 Score=52.94 Aligned_cols=42 Identities=24% Similarity=0.318 Sum_probs=31.8
Q ss_pred ceEEEEEechhHHHHHHHHhC-CCcCcccccEEEEecCCCCCC
Q 002827 206 KSVILVGHSVGGFVARAAIIH-PLLRKSAVETVLTLSSPHQSP 247 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~~-p~~~~~~V~~iITL~tPh~~p 247 (876)
.++++.|||.||.+|..++.. +.-..++|..+.+..+|--.+
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~ 126 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSE 126 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCCh
Confidence 369999999999999997763 221246799999998775443
No 130
>COG4099 Predicted peptidase [General function prediction only]
Probab=93.30 E-value=0.24 Score=55.00 Aligned_cols=59 Identities=15% Similarity=0.180 Sum_probs=38.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecC
Q 002827 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (876)
Q Consensus 166 ~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~t 242 (876)
.+.....+-+.-+.+.+.+.|+. +-.++.++|-||||.-+-.++. .| |+..++.+.++.
T Consensus 244 ~t~~~l~~~idli~~vlas~ynI---------------D~sRIYviGlSrG~~gt~al~~--kf-PdfFAaa~~iaG 302 (387)
T COG4099 244 KTLLYLIEKIDLILEVLASTYNI---------------DRSRIYVIGLSRGGFGTWALAE--KF-PDFFAAAVPIAG 302 (387)
T ss_pred ccchhHHHHHHHHHHHHhhccCc---------------ccceEEEEeecCcchhhHHHHH--hC-chhhheeeeecC
Confidence 34443333343333466777763 2358999999999998888775 33 455777777763
No 131
>PLN02571 triacylglycerol lipase
Probab=93.24 E-value=0.13 Score=59.52 Aligned_cols=58 Identities=21% Similarity=0.438 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhC---CCcCc-----c-cc-cEEEEecCC
Q 002827 174 YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH---PLLRK-----S-AV-ETVLTLSSP 243 (876)
Q Consensus 174 yvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~---p~~~~-----~-~V-~~iITL~tP 243 (876)
-+...|+.+++.|++ ..-++++.||||||.+|..++.. -.+.. + .+ -+++|.|+|
T Consensus 209 qvl~eV~~L~~~y~~---------------e~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsP 273 (413)
T PLN02571 209 QVLNEVGRLVEKYKD---------------EEISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASP 273 (413)
T ss_pred HHHHHHHHHHHhcCc---------------ccccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCC
Confidence 344556666677752 02379999999999998886531 11211 1 12 256799999
Q ss_pred CCC
Q 002827 244 HQS 246 (876)
Q Consensus 244 h~~ 246 (876)
..|
T Consensus 274 RVG 276 (413)
T PLN02571 274 RVG 276 (413)
T ss_pred Ccc
Confidence 887
No 132
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=93.23 E-value=0.44 Score=51.88 Aligned_cols=62 Identities=23% Similarity=0.185 Sum_probs=37.3
Q ss_pred ceeEEEecCCCccCccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh
Q 002827 148 RLDWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (876)
Q Consensus 148 ~~D~FavDFnEE~SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~ 225 (876)
+..++++|..=-...-....++| +.++++++.+.-.+ -..++++|.+.|||.||.+|..+..
T Consensus 110 g~~vv~vdYrlaPe~~~p~~~~d----~~~a~~~l~~~~~~------------~g~dp~~i~v~GdSAGG~La~~~a~ 171 (312)
T COG0657 110 GAVVVSVDYRLAPEHPFPAALED----AYAAYRWLRANAAE------------LGIDPSRIAVAGDSAGGHLALALAL 171 (312)
T ss_pred CCEEEecCCCCCCCCCCCchHHH----HHHHHHHHHhhhHh------------hCCCccceEEEecCcccHHHHHHHH
Confidence 45566666653222222233333 66677776544210 1134789999999999988888665
No 133
>PLN02753 triacylglycerol lipase
Probab=93.18 E-value=0.15 Score=60.26 Aligned_cols=61 Identities=23% Similarity=0.368 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh---CCCcC----cccc-cEEEEecCCCC
Q 002827 174 YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII---HPLLR----KSAV-ETVLTLSSPHQ 245 (876)
Q Consensus 174 yvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~---~p~~~----~~~V-~~iITL~tPh~ 245 (876)
-|...|+.+++.|++ +.....+|++.|||+||-+|..++. .-.+. ...+ -.++|.|+|..
T Consensus 292 QVl~eVkrLl~~Y~~------------e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRV 359 (531)
T PLN02753 292 QILTEVKRLVEEHGD------------DDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRV 359 (531)
T ss_pred HHHHHHHHHHHHccc------------ccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCc
Confidence 356667778888863 1112468999999999998888653 11111 1112 25899998888
Q ss_pred C
Q 002827 246 S 246 (876)
Q Consensus 246 ~ 246 (876)
|
T Consensus 360 G 360 (531)
T PLN02753 360 G 360 (531)
T ss_pred c
Confidence 7
No 134
>PLN02454 triacylglycerol lipase
Probab=93.15 E-value=0.13 Score=59.27 Aligned_cols=58 Identities=24% Similarity=0.448 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhC---CCcCcccc-cEEEEecCCCCCC
Q 002827 175 VVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH---PLLRKSAV-ETVLTLSSPHQSP 247 (876)
Q Consensus 175 vn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~---p~~~~~~V-~~iITL~tPh~~p 247 (876)
+...|+.+++.|++ ...+|++.||||||-+|..++.. -.+.+..+ -+++|.|+|..|-
T Consensus 212 vl~~V~~l~~~Yp~---------------~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 212 LLAKIKELLERYKD---------------EKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHhCCC---------------CCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcccC
Confidence 44567777777752 12369999999999999886631 11111112 2468999888763
No 135
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=92.51 E-value=0.26 Score=53.31 Aligned_cols=38 Identities=16% Similarity=0.145 Sum_probs=25.2
Q ss_pred CceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecC
Q 002827 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~t 242 (876)
..+..+.||||||++|-.++..-+-......++...|+
T Consensus 73 d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~ 110 (244)
T COG3208 73 DAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGC 110 (244)
T ss_pred CCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecC
Confidence 35899999999999999877521111122566666554
No 136
>PLN02162 triacylglycerol lipase
Probab=92.50 E-value=0.25 Score=57.88 Aligned_cols=52 Identities=23% Similarity=0.326 Sum_probs=34.3
Q ss_pred CceEEEEEechhHHHHHHHHh---CCCcC--cccccEEEEecCCCCCCCcccCcchHHHHHH
Q 002827 205 PKSVILVGHSVGGFVARAAII---HPLLR--KSAVETVLTLSSPHQSPPLALQPSLGNYFAR 261 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~---~p~~~--~~~V~~iITL~tPh~~pPvafD~~l~~~Y~~ 261 (876)
..++++.|||+||-+|-.++. .-... .+.+.+++|.|+|-.| |....+++++
T Consensus 277 ~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVG-----n~~FA~~~~~ 333 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVG-----DEDFGEFMKG 333 (475)
T ss_pred CceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCcc-----CHHHHHHHHh
Confidence 358999999999999888543 11111 2346789999988876 4444444443
No 137
>PLN02802 triacylglycerol lipase
Probab=92.41 E-value=0.17 Score=59.58 Aligned_cols=59 Identities=24% Similarity=0.361 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhC-CCcCccc-ccEEEEecCCCCC
Q 002827 173 EYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH-PLLRKSA-VETVLTLSSPHQS 246 (876)
Q Consensus 173 eyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~-p~~~~~~-V~~iITL~tPh~~ 246 (876)
+.|.+.|+.+++.|++ ...+|++.||||||-+|..++.. -....+. .-.++|.|+|..|
T Consensus 312 eqVl~eV~~Ll~~Y~~---------------e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRVG 372 (509)
T PLN02802 312 ESVVGEVRRLMEKYKG---------------EELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRVG 372 (509)
T ss_pred HHHHHHHHHHHHhCCC---------------CcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCcc
Confidence 3456667777777752 12479999999999988886531 1111111 1258999988887
No 138
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=92.36 E-value=1 Score=49.32 Aligned_cols=39 Identities=26% Similarity=0.213 Sum_probs=28.4
Q ss_pred CCCceEEEEEechhHHHHHHHHhCC-C-cCcccccEEEEec
Q 002827 203 SLPKSVILVGHSVGGFVARAAIIHP-L-LRKSAVETVLTLS 241 (876)
Q Consensus 203 ~~p~~ViLVGHSMGGiVAr~~l~~p-~-~~~~~V~~iITL~ 241 (876)
++-.++.|.|||=||.+|..++..- + -...+++++|.+.
T Consensus 88 ~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lD 128 (259)
T PF12740_consen 88 PDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLD 128 (259)
T ss_pred ccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEec
Confidence 4567999999999999998876521 0 0134688888886
No 139
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=92.31 E-value=1 Score=52.26 Aligned_cols=41 Identities=24% Similarity=0.340 Sum_probs=32.6
Q ss_pred CCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCC
Q 002827 204 LPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 204 ~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~ 245 (876)
+|.+|+|.|||.||..+..++..|.. ...++++|.++.+..
T Consensus 174 d~~~v~~~G~SaG~~~~~~~~~~~~~-~~lf~~~i~~sg~~~ 214 (493)
T cd00312 174 DPDSVTIFGESAGGASVSLLLLSPDS-KGLFHRAISQSGSAL 214 (493)
T ss_pred CcceEEEEeecHHHHHhhhHhhCcch-hHHHHHHhhhcCCcc
Confidence 47899999999999999888876643 457888888876544
No 140
>PLN03037 lipase class 3 family protein; Provisional
Probab=91.94 E-value=0.27 Score=58.22 Aligned_cols=61 Identities=18% Similarity=0.319 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh-CCCcCccc-ccEEEEecCCCCCC
Q 002827 174 YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSA-VETVLTLSSPHQSP 247 (876)
Q Consensus 174 yvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~-~p~~~~~~-V~~iITL~tPh~~p 247 (876)
-|.+.|+.+++.|++. ....++++.||||||-+|..++. .....++. --.++|.|+|..|-
T Consensus 299 QVl~eV~rLv~~Yk~~-------------ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN 361 (525)
T PLN03037 299 QVMEEVKRLVNFFKDR-------------GEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGN 361 (525)
T ss_pred HHHHHHHHHHHhcccc-------------CCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccC
Confidence 3555677777777631 11358999999999999988552 10001111 23578999888763
No 141
>PLN02761 lipase class 3 family protein
Probab=91.91 E-value=0.24 Score=58.64 Aligned_cols=61 Identities=23% Similarity=0.371 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh---CCCcC-----cccc-cEEEEecCCCC
Q 002827 175 VVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII---HPLLR-----KSAV-ETVLTLSSPHQ 245 (876)
Q Consensus 175 vn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~---~p~~~-----~~~V-~~iITL~tPh~ 245 (876)
|...|+.+++.|... ......+|++.||||||-+|..++. .-+++ ...+ -+++|.|+|..
T Consensus 274 Vl~eV~rL~~~Y~~~-----------~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRV 342 (527)
T PLN02761 274 VLAEVKRLVEYYGTE-----------EEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRV 342 (527)
T ss_pred HHHHHHHHHHhcccc-----------cCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCc
Confidence 556677777777420 0112358999999999999887553 11111 0011 24889998888
Q ss_pred C
Q 002827 246 S 246 (876)
Q Consensus 246 ~ 246 (876)
|
T Consensus 343 G 343 (527)
T PLN02761 343 G 343 (527)
T ss_pred C
Confidence 7
No 142
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=91.88 E-value=0.62 Score=47.79 Aligned_cols=46 Identities=20% Similarity=0.323 Sum_probs=36.3
Q ss_pred CceEEEEEechhHHHHHHHHhC---CCcCcccccEEEEecCCCCCCCcc
Q 002827 205 PKSVILVGHSVGGFVARAAIIH---PLLRKSAVETVLTLSSPHQSPPLA 250 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~---p~~~~~~V~~iITL~tPh~~pPva 250 (876)
..+++|+|+|.|+.|+..++.. +.-..++|.+++++|.|.+.++..
T Consensus 80 ~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~~~~~ 128 (179)
T PF01083_consen 80 NTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRGAGQP 128 (179)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTBTTTT
T ss_pred CCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcccCCcc
Confidence 3689999999999999998864 222356899999999999976554
No 143
>PLN02324 triacylglycerol lipase
Probab=91.66 E-value=0.25 Score=57.16 Aligned_cols=59 Identities=24% Similarity=0.343 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhC--C-Cc-------C-cccccEEEEecC
Q 002827 174 YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH--P-LL-------R-KSAVETVLTLSS 242 (876)
Q Consensus 174 yvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~--p-~~-------~-~~~V~~iITL~t 242 (876)
-|.+.|+.+++.|++ ...+|++.||||||-+|-.++.. . .+ . ...--+++|.|+
T Consensus 198 qVl~eV~~L~~~Yp~---------------e~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGs 262 (415)
T PLN02324 198 QVQGELKRLLELYKN---------------EEISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGS 262 (415)
T ss_pred HHHHHHHHHHHHCCC---------------CCceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecC
Confidence 345667777888863 12489999999999888886531 0 00 0 111124889999
Q ss_pred CCCCC
Q 002827 243 PHQSP 247 (876)
Q Consensus 243 Ph~~p 247 (876)
|..|-
T Consensus 263 PRVGN 267 (415)
T PLN02324 263 PRIGD 267 (415)
T ss_pred CCcCC
Confidence 88873
No 144
>PLN02719 triacylglycerol lipase
Probab=91.64 E-value=0.28 Score=57.91 Aligned_cols=62 Identities=23% Similarity=0.397 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhC---CCcCc---c-cc-cEEEEecCCCC
Q 002827 174 YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH---PLLRK---S-AV-ETVLTLSSPHQ 245 (876)
Q Consensus 174 yvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~---p~~~~---~-~V-~~iITL~tPh~ 245 (876)
-|...|+.+++.|++. .....+|++.||||||-+|-.++.. -.++. . .+ -+++|.|+|..
T Consensus 278 QVl~eV~rL~~~Ypd~------------~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRV 345 (518)
T PLN02719 278 QVLTEVKRLVERYGDE------------EGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRV 345 (518)
T ss_pred HHHHHHHHHHHHCCcc------------cCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCc
Confidence 3456677777788631 0113589999999999988885531 11110 1 11 24789998888
Q ss_pred CC
Q 002827 246 SP 247 (876)
Q Consensus 246 ~p 247 (876)
|-
T Consensus 346 GN 347 (518)
T PLN02719 346 GN 347 (518)
T ss_pred cC
Confidence 73
No 145
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=91.63 E-value=0.35 Score=50.15 Aligned_cols=40 Identities=30% Similarity=0.384 Sum_probs=33.1
Q ss_pred ceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCCCCC
Q 002827 206 KSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQSPP 248 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~~pP 248 (876)
.+++||+||.|+.++..++.+. ...|.+.+.++.|....|
T Consensus 59 ~~~vlVAHSLGc~~v~h~~~~~---~~~V~GalLVAppd~~~~ 98 (181)
T COG3545 59 GPVVLVAHSLGCATVAHWAEHI---QRQVAGALLVAPPDVSRP 98 (181)
T ss_pred CCeEEEEecccHHHHHHHHHhh---hhccceEEEecCCCcccc
Confidence 4699999999999999988743 237999999998887655
No 146
>PLN02934 triacylglycerol lipase
Probab=91.62 E-value=0.5 Score=55.87 Aligned_cols=51 Identities=22% Similarity=0.327 Sum_probs=33.9
Q ss_pred ceEEEEEechhHHHHHHHHhC----CCcC-cccccEEEEecCCCCCCCcccCcchHHHHHH
Q 002827 206 KSVILVGHSVGGFVARAAIIH----PLLR-KSAVETVLTLSSPHQSPPLALQPSLGNYFAR 261 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~~----p~~~-~~~V~~iITL~tPh~~pPvafD~~l~~~Y~~ 261 (876)
.++++.|||+||-+|-.++.. .+.. ...+..++|.|+|-.| |....+++++
T Consensus 321 ~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsPRVG-----N~~FA~~~~~ 376 (515)
T PLN02934 321 AKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQPRIG-----NRQLGKFMEA 376 (515)
T ss_pred CeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCCCcc-----CHHHHHHHHH
Confidence 589999999999998886531 1111 1234578999988876 4444555544
No 147
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=90.82 E-value=0.96 Score=48.59 Aligned_cols=52 Identities=19% Similarity=0.224 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 168 LEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 168 L~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
-...||-+..+++++-+.- .--.+++|||-||.|+..+.. .|.. +..+|.++
T Consensus 85 ~~~eadDL~sV~q~~s~~n------------------r~v~vi~gHSkGg~Vvl~ya~--K~~d--~~~viNcs 136 (269)
T KOG4667|consen 85 YNTEADDLHSVIQYFSNSN------------------RVVPVILGHSKGGDVVLLYAS--KYHD--IRNVINCS 136 (269)
T ss_pred ccchHHHHHHHHHHhccCc------------------eEEEEEEeecCccHHHHHHHH--hhcC--chheEEcc
Confidence 3345567777777763210 124578999999999999886 4422 77888886
No 148
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=90.49 E-value=1.4 Score=46.75 Aligned_cols=117 Identities=18% Similarity=0.236 Sum_probs=70.2
Q ss_pred cEEEecCCcccHHhHHHHHHHHHHHhcCCCCccch-hhhh---hhccccCCcccccccccccCccccceeEEEecCCCcc
Q 002827 85 PVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSF-YQEA---SLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (876)
Q Consensus 85 PVlFIHG~~GS~kqwrsia~~ls~~y~~~~~~~~~-~~~~---~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFnEE~ 160 (876)
-|||+||...+...|..+++.+. +++- .| +=.+ ..++.+++- ....+|.+-+|.+...
T Consensus 5 tIi~LHglGDsg~~~~~~~~~l~--l~Ni----KwIcP~aP~rpvt~~~G~~------------~~aWfd~~~~~~~~~~ 66 (206)
T KOG2112|consen 5 TIIFLHGLGDSGSGWAQFLKQLP--LPNI----KWICPTAPSRPVTLNGGAF------------MNAWFDIMELSSDAPE 66 (206)
T ss_pred EEEEEecCCCCCccHHHHHHcCC--CCCe----eEEcCCCCCCcccccCCCc------------ccceecceeeCcccch
Confidence 48999999999999966666522 1110 00 0000 011111111 1125666666666443
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEe
Q 002827 161 SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (876)
Q Consensus 161 SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL 240 (876)
+...+..=++++...|++-.+ .+.++.++.+-|-||||.+|..+.. .| +..+.+++.+
T Consensus 67 ---d~~~~~~aa~~i~~Li~~e~~----------------~Gi~~~rI~igGfs~G~a~aL~~~~--~~-~~~l~G~~~~ 124 (206)
T KOG2112|consen 67 ---DEEGLHRAADNIANLIDNEPA----------------NGIPSNRIGIGGFSQGGALALYSAL--TY-PKALGGIFAL 124 (206)
T ss_pred ---hhhHHHHHHHHHHHHHHHHHH----------------cCCCccceeEcccCchHHHHHHHHh--cc-ccccceeecc
Confidence 555667777777777765321 2346789999999999999999765 23 3446677766
Q ss_pred c
Q 002827 241 S 241 (876)
Q Consensus 241 ~ 241 (876)
+
T Consensus 125 s 125 (206)
T KOG2112|consen 125 S 125 (206)
T ss_pred c
Confidence 5
No 149
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=90.34 E-value=1.3 Score=48.87 Aligned_cols=81 Identities=16% Similarity=0.138 Sum_probs=44.4
Q ss_pred ceeEEEecCCCccCccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCC
Q 002827 148 RLDWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHP 227 (876)
Q Consensus 148 ~~D~FavDFnEE~SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p 227 (876)
++-+.|.++-+-.. .+| .+.++....+++++..-.+...- ..-..+..++.++|||.||..|-+++.
T Consensus 73 GfIVVAPQl~~~~~-p~~---~~Ei~~aa~V~~WL~~gL~~~Lp-------~~V~~nl~klal~GHSrGGktAFAlAL-- 139 (307)
T PF07224_consen 73 GFIVVAPQLYTLFP-PDG---QDEIKSAASVINWLPEGLQHVLP-------ENVEANLSKLALSGHSRGGKTAFALAL-- 139 (307)
T ss_pred CeEEEechhhcccC-CCc---hHHHHHHHHHHHHHHhhhhhhCC-------CCcccccceEEEeecCCccHHHHHHHh--
Confidence 34455555544222 232 24455556666665433222111 011234689999999999999998765
Q ss_pred CcC-cccccEEEEec
Q 002827 228 LLR-KSAVETVLTLS 241 (876)
Q Consensus 228 ~~~-~~~V~~iITL~ 241 (876)
+|. .-.+.++|-+.
T Consensus 140 g~a~~lkfsaLIGiD 154 (307)
T PF07224_consen 140 GYATSLKFSALIGID 154 (307)
T ss_pred cccccCchhheeccc
Confidence 442 22456666554
No 150
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=89.91 E-value=0.14 Score=58.65 Aligned_cols=42 Identities=38% Similarity=0.442 Sum_probs=29.9
Q ss_pred CceEEEEEechhHHHHHHHHhC--CCcC--ccc--ccEEEEecCCCCC
Q 002827 205 PKSVILVGHSVGGFVARAAIIH--PLLR--KSA--VETVLTLSSPHQS 246 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~--p~~~--~~~--V~~iITL~tPh~~ 246 (876)
.+++-.||||.||+++|.+... +.+. -.. ...-+|++||+.+
T Consensus 149 i~kISfvghSLGGLvar~AIgyly~~~~~~f~~v~p~~fitlasp~~g 196 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAIGYLYEKAPDFFSDVEPVNFITLASPKLG 196 (405)
T ss_pred cceeeeeeeecCCeeeeEEEEeecccccccccccCcchhhhhcCCCcc
Confidence 4689999999999999997641 1111 122 3467899999974
No 151
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=89.40 E-value=2.3 Score=47.49 Aligned_cols=55 Identities=16% Similarity=0.296 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh-CCCcCcccccEEEEecCC
Q 002827 170 EHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSP 243 (876)
Q Consensus 170 dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~-~p~~~~~~V~~iITL~tP 243 (876)
|.+-|+.+.|..+...|.. +|++|.+.|-|-||..|-.++. .|. ..+++-.++++
T Consensus 123 ddVgflr~lva~l~~~~gi---------------dp~RVyvtGlS~GG~Ma~~lac~~p~----~faa~A~VAg~ 178 (312)
T COG3509 123 DDVGFLRALVAKLVNEYGI---------------DPARVYVTGLSNGGRMANRLACEYPD----IFAAIAPVAGL 178 (312)
T ss_pred cHHHHHHHHHHHHHHhcCc---------------CcceEEEEeeCcHHHHHHHHHhcCcc----cccceeeeecc
Confidence 4788999999999988863 4789999999999977777664 343 35555555433
No 152
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=89.40 E-value=0.55 Score=54.36 Aligned_cols=38 Identities=26% Similarity=0.374 Sum_probs=26.9
Q ss_pred CCceEEEEEechhHHHHHH-HHhCCCcCcccccEEEEecCCCC
Q 002827 204 LPKSVILVGHSVGGFVARA-AIIHPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 204 ~p~~ViLVGHSMGGiVAr~-~l~~p~~~~~~V~~iITL~tPh~ 245 (876)
+.++|.++|-||||.+|-. +..+ +++++++|++|+|.+
T Consensus 259 D~~RV~~~G~SfGGy~AvRlA~le----~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 259 DHTRVGAWGFSFGGYYAVRLAALE----DPRLKAVVALGAPVH 297 (411)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHT----TTT-SEEEEES---S
T ss_pred ChhheEEEEeccchHHHHHHHHhc----ccceeeEeeeCchHh
Confidence 4679999999999988855 4443 356999999998743
No 153
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=88.44 E-value=0.57 Score=48.47 Aligned_cols=39 Identities=28% Similarity=0.352 Sum_probs=32.7
Q ss_pred CceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCCC
Q 002827 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQS 246 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~~ 246 (876)
...++++|||+|.+|+=.++.. ....+..+|.++||=-+
T Consensus 108 ~~~~tv~GHSYGS~v~G~A~~~---~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 108 DAHLTVVGHSYGSTVVGLAAQQ---GGLRVDDVVLVGSPGMG 146 (177)
T ss_pred CCCEEEEEecchhHHHHHHhhh---CCCCcccEEEECCCCCC
Confidence 4689999999999999999875 23468999999999654
No 154
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=88.39 E-value=1.3 Score=50.72 Aligned_cols=51 Identities=22% Similarity=0.208 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh
Q 002827 167 ILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (876)
Q Consensus 167 tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~ 225 (876)
...++..++...|.+++++ .++.+. ..+-.+.+|-++|||.||.-++..+.
T Consensus 128 ~~~erp~dis~lLd~L~~~-~~sP~l-------~~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 128 EWWERPLDISALLDALLQL-TASPAL-------AGRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred hhhcccccHHHHHHHHHHh-hcCccc-------ccccCccceEEEecccccHHHHHhcc
Confidence 3446677777777777766 322111 12345789999999999999998774
No 155
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=88.37 E-value=1.6 Score=52.88 Aligned_cols=36 Identities=17% Similarity=0.325 Sum_probs=27.6
Q ss_pred CCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecC
Q 002827 203 SLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (876)
Q Consensus 203 ~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~t 242 (876)
.+++++.|.|||+||..+..++++.+ ..++.++..+
T Consensus 470 ~d~~ri~i~G~SyGGymtl~~~~~~~----~f~a~~~~~~ 505 (620)
T COG1506 470 VDPERIGITGGSYGGYMTLLAATKTP----RFKAAVAVAG 505 (620)
T ss_pred cChHHeEEeccChHHHHHHHHHhcCc----hhheEEeccC
Confidence 34679999999999999999887432 3566666653
No 156
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.67 E-value=3.5 Score=45.23 Aligned_cols=37 Identities=16% Similarity=0.353 Sum_probs=26.1
Q ss_pred CCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 204 LPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 204 ~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
+..+++++|||.|.......+.. .-....|.+.+.|-
T Consensus 108 k~~ki~iiGHSiGaYm~Lqil~~-~k~~~~vqKa~~LF 144 (301)
T KOG3975|consen 108 KDRKIYIIGHSIGAYMVLQILPS-IKLVFSVQKAVLLF 144 (301)
T ss_pred CCCEEEEEecchhHHHHHHHhhh-cccccceEEEEEec
Confidence 35699999999999888877752 11234577777764
No 157
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=84.53 E-value=2.5 Score=47.65 Aligned_cols=55 Identities=27% Similarity=0.441 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhC---CCcCcccccEEEEecCCCCC
Q 002827 175 VVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH---PLLRKSAVETVLTLSSPHQS 246 (876)
Q Consensus 175 vn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~---p~~~~~~V~~iITL~tPh~~ 246 (876)
+.+-++.++++|+ .-+|++-||||||-.|-.++.. -+.....--+++|.|.|-.|
T Consensus 157 ~~~~~~~L~~~~~-----------------~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PRvG 214 (336)
T KOG4569|consen 157 LDAELRRLIELYP-----------------NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPRVG 214 (336)
T ss_pred HHHHHHHHHHhcC-----------------CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCcc
Confidence 3445666677775 2589999999999888776541 12222334589999977765
No 158
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=84.19 E-value=3.8 Score=46.67 Aligned_cols=41 Identities=32% Similarity=0.438 Sum_probs=30.4
Q ss_pred ceEEEEEechhHHHHHHHHh-CCCcC-cccccEEEEecCCCCC
Q 002827 206 KSVILVGHSVGGFVARAAII-HPLLR-KSAVETVLTLSSPHQS 246 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~-~p~~~-~~~V~~iITL~tPh~~ 246 (876)
.+|+|||||||+.|....+. +.+.+ .+.|+.++.+++|...
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 47999999999988888664 32221 3568999999966653
No 159
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=84.17 E-value=1.6 Score=45.20 Aligned_cols=39 Identities=28% Similarity=0.477 Sum_probs=31.2
Q ss_pred ceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCCCC
Q 002827 206 KSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQSP 247 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~~p 247 (876)
.+.++-||||||-+|-.++. +...+ |+++++++=|++-|
T Consensus 89 gpLi~GGkSmGGR~aSmvad--e~~A~-i~~L~clgYPfhpp 127 (213)
T COG3571 89 GPLIIGGKSMGGRVASMVAD--ELQAP-IDGLVCLGYPFHPP 127 (213)
T ss_pred CceeeccccccchHHHHHHH--hhcCC-cceEEEecCccCCC
Confidence 37999999999999988776 23233 99999999999844
No 160
>KOG3101 consensus Esterase D [General function prediction only]
Probab=83.52 E-value=3.2 Score=44.65 Aligned_cols=25 Identities=36% Similarity=0.476 Sum_probs=19.2
Q ss_pred CCCceEEEEEechhHHHHHH-HHhCC
Q 002827 203 SLPKSVILVGHSVGGFVARA-AIIHP 227 (876)
Q Consensus 203 ~~p~~ViLVGHSMGGiVAr~-~l~~p 227 (876)
.++.++-|.||||||.=|.. ++..|
T Consensus 138 ld~~k~~IfGHSMGGhGAl~~~Lkn~ 163 (283)
T KOG3101|consen 138 LDPLKVGIFGHSMGGHGALTIYLKNP 163 (283)
T ss_pred ccchhcceeccccCCCceEEEEEcCc
Confidence 35678999999999988776 45544
No 161
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=83.10 E-value=1.5 Score=50.19 Aligned_cols=43 Identities=21% Similarity=0.279 Sum_probs=33.6
Q ss_pred CceEE-EEEechhHHHHHHHHhCCCcCcccccEEEEecCCCCCCCcc
Q 002827 205 PKSVI-LVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQSPPLA 250 (876)
Q Consensus 205 p~~Vi-LVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~~pPva 250 (876)
.+++. +||-||||+.|...+. .| ++.|..+|.++++++..|..
T Consensus 145 I~~l~avvGgSmGGMqaleWa~--~y-Pd~V~~~i~ia~~~r~s~~~ 188 (368)
T COG2021 145 IKKLAAVVGGSMGGMQALEWAI--RY-PDRVRRAIPIATAARLSAQN 188 (368)
T ss_pred cceEeeeeccChHHHHHHHHHH--hC-hHHHhhhheecccccCCHHH
Confidence 34554 9999999999999775 33 56799999999988876544
No 162
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=82.24 E-value=5.8 Score=46.68 Aligned_cols=44 Identities=20% Similarity=0.257 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh
Q 002827 168 LEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (876)
Q Consensus 168 L~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~ 225 (876)
..+-|+.+.++++.....|.+ -...+++|+||||||..+..++.
T Consensus 147 ~~~~a~d~~~~l~~f~~~~p~--------------~~~~~~~i~GeSygG~y~p~~a~ 190 (462)
T PTZ00472 147 ESEVSEDMYNFLQAFFGSHED--------------LRANDLFVVGESYGGHYAPATAY 190 (462)
T ss_pred hHHHHHHHHHHHHHHHHhCcc--------------ccCCCEEEEeecchhhhHHHHHH
Confidence 456677777777777666652 11358999999999988877654
No 163
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=82.24 E-value=2.6 Score=46.38 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=24.1
Q ss_pred CceEEEEEechhHHHHHHHH-hCCCcCcccccEEEEec
Q 002827 205 PKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLS 241 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l-~~p~~~~~~V~~iITL~ 241 (876)
.++-.++||||||+++..++ +.| +.....+.++
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p----~~F~~y~~~S 169 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYP----DCFGRYGLIS 169 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCc----chhceeeeec
Confidence 34578999999999988866 443 3466666665
No 164
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=81.81 E-value=12 Score=41.80 Aligned_cols=62 Identities=15% Similarity=0.156 Sum_probs=40.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCC
Q 002827 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSP 243 (876)
Q Consensus 166 ~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tP 243 (876)
.....|.+.+..-|+...+...+ ...++++||||.+|+..+..++. +.....++++|.++.-
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~--------------~~~~~ivlIg~G~gA~~~~~~la--~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQ--------------QGGKNIVLIGHGTGAGWAARYLA--EKPPPMPDALVLINAY 228 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHh--------------cCCceEEEEEeChhHHHHHHHHh--cCCCcccCeEEEEeCC
Confidence 44556666666555554443321 11356999999999988888776 2334558999999843
No 165
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=81.42 E-value=4.1 Score=48.26 Aligned_cols=40 Identities=25% Similarity=0.326 Sum_probs=33.7
Q ss_pred CCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCC
Q 002827 204 LPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPH 244 (876)
Q Consensus 204 ~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh 244 (876)
+|++|+|.|+|.||..+..++..|.. ....++.|+++.+.
T Consensus 178 Dp~NVTl~GeSAGa~si~~Lla~P~A-kGLF~rAi~~Sg~~ 217 (491)
T COG2272 178 DPQNVTLFGESAGAASILTLLAVPSA-KGLFHRAIALSGAA 217 (491)
T ss_pred CccceEEeeccchHHHHHHhhcCccc-hHHHHHHHHhCCCC
Confidence 48899999999999999999998875 56788888888544
No 166
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=80.97 E-value=3.8 Score=45.93 Aligned_cols=34 Identities=26% Similarity=0.137 Sum_probs=25.0
Q ss_pred CCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 204 LPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 204 ~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
+++++.+.|+|.||..+..++.+. ++|+.++..-
T Consensus 173 D~~rI~v~G~SqGG~lal~~aaLd----~rv~~~~~~v 206 (320)
T PF05448_consen 173 DGKRIGVTGGSQGGGLALAAAALD----PRVKAAAADV 206 (320)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHS----ST-SEEEEES
T ss_pred CcceEEEEeecCchHHHHHHHHhC----ccccEEEecC
Confidence 357999999999999999877632 3477766653
No 167
>PLN02847 triacylglycerol lipase
Probab=77.84 E-value=2.9 Score=50.58 Aligned_cols=19 Identities=37% Similarity=0.482 Sum_probs=16.4
Q ss_pred ceEEEEEechhHHHHHHHH
Q 002827 206 KSVILVGHSVGGFVARAAI 224 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l 224 (876)
-+++++||||||-||-.+.
T Consensus 251 YkLVITGHSLGGGVAALLA 269 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLT 269 (633)
T ss_pred CeEEEeccChHHHHHHHHH
Confidence 5899999999998887754
No 168
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=76.59 E-value=13 Score=39.31 Aligned_cols=41 Identities=29% Similarity=0.314 Sum_probs=30.3
Q ss_pred CceEEEEEechhHHHHHHHH-hCCCcCcccccEEEEecCCCC
Q 002827 205 PKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l-~~p~~~~~~V~~iITL~tPh~ 245 (876)
.++|+|||-|.|+=|.-..+ .+|.-...+|..+++|+..+.
T Consensus 67 ~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 67 RKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred CceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 36899999999995555544 566444678999999985444
No 169
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=76.32 E-value=3.9 Score=43.51 Aligned_cols=35 Identities=29% Similarity=0.373 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh
Q 002827 175 VVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (876)
Q Consensus 175 vn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~ 225 (876)
|.+|-++.|..+.+ ..++||+|||=|+.+++.++.
T Consensus 80 V~~AF~~yL~~~n~----------------GRPfILaGHSQGs~~l~~LL~ 114 (207)
T PF11288_consen 80 VRAAFDYYLANYNN----------------GRPFILAGHSQGSMHLLRLLK 114 (207)
T ss_pred HHHHHHHHHHhcCC----------------CCCEEEEEeChHHHHHHHHHH
Confidence 55666676766542 468999999999999999886
No 170
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=74.87 E-value=3.5 Score=44.08 Aligned_cols=52 Identities=21% Similarity=0.274 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecC
Q 002827 167 ILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (876)
Q Consensus 167 tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~t 242 (876)
-..+-|||..+.++.+ +-+++.+.|.|=||+.|..++. .+ ++.|+.+|..+.
T Consensus 96 ff~~Da~~avdLM~aL---------------------k~~~fsvlGWSdGgiTalivAa--k~-~e~v~rmiiwga 147 (277)
T KOG2984|consen 96 FFMKDAEYAVDLMEAL---------------------KLEPFSVLGWSDGGITALIVAA--KG-KEKVNRMIIWGA 147 (277)
T ss_pred HHHHhHHHHHHHHHHh---------------------CCCCeeEeeecCCCeEEEEeec--cC-hhhhhhheeecc
Confidence 3556677777777654 1368999999999999988665 22 456999998873
No 171
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=73.87 E-value=12 Score=43.37 Aligned_cols=57 Identities=21% Similarity=0.271 Sum_probs=37.7
Q ss_pred CCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCCCCCcccCcchHHHHHHH
Q 002827 204 LPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQSPPLALQPSLGNYFARV 262 (876)
Q Consensus 204 ~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~~pPvafD~~l~~~Y~~v 262 (876)
+|++|+|.|||.||..+...+..|. ..+..++.|..+..... +...+..-.+.++++
T Consensus 206 Dp~~VTl~G~SAGa~sv~~~l~sp~-~~~LF~raI~~SGs~~~-~~~~~~~~~~~~~~l 262 (535)
T PF00135_consen 206 DPDNVTLFGQSAGAASVSLLLLSPS-SKGLFHRAILQSGSALS-PWATSENPEQQAQKL 262 (535)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHGGG-GTTSBSEEEEES--TTS-TTSSBSHHHHHHHHH
T ss_pred CCcceeeeeecccccccceeeeccc-ccccccccccccccccc-ccccccccchhhhhh
Confidence 4789999999999988888766543 35689999999875443 333333334445444
No 172
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=72.87 E-value=13 Score=38.71 Aligned_cols=38 Identities=13% Similarity=0.026 Sum_probs=22.2
Q ss_pred eEEEEEechhHHHHHHHHhCCCc-----CcccccEEEEecCCC
Q 002827 207 SVILVGHSVGGFVARAAIIHPLL-----RKSAVETVLTLSSPH 244 (876)
Q Consensus 207 ~ViLVGHSMGGiVAr~~l~~p~~-----~~~~V~~iITL~tPh 244 (876)
-.-|+|.|.||.+|-.++.+-.. ....++-+|.+++..
T Consensus 103 fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 103 FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp -SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 46799999999998887642110 123478888887543
No 173
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=72.59 E-value=24 Score=40.15 Aligned_cols=38 Identities=26% Similarity=0.380 Sum_probs=27.9
Q ss_pred CCceEEEEEechhHHHHHHHHhC--CC-cCcccccEEEEec
Q 002827 204 LPKSVILVGHSVGGFVARAAIIH--PL-LRKSAVETVLTLS 241 (876)
Q Consensus 204 ~p~~ViLVGHSMGGiVAr~~l~~--p~-~~~~~V~~iITL~ 241 (876)
++++|.|+|-|.||-+|..+... .. .....++++|.+-
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~ 204 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIY 204 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEe
Confidence 47789999999999777775531 11 2356789999986
No 174
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.11 E-value=12 Score=39.37 Aligned_cols=109 Identities=20% Similarity=0.320 Sum_probs=63.7
Q ss_pred hccCCCcEEEecCCcccHHhHHHHHHH--HHHHhcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecC
Q 002827 79 KQLNGVPVLFIPGNAGSYKQVRSLAAE--SDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDL 156 (876)
Q Consensus 79 ~~l~g~PVlFIHG~~GS~kqwrsia~~--ls~~y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDF 156 (876)
-.-.|+|||..|-..|++-+..+++-. +++... .-.+.+|++|-
T Consensus 22 yGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie----------------------------------~G~vQlft~~g 67 (227)
T COG4947 22 YGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIE----------------------------------EGLVQLFTLSG 67 (227)
T ss_pred ccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHh----------------------------------cCcEEEEEecc
Confidence 346789999999999998887776543 222110 01466777765
Q ss_pred CCccCccch-hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHH-hCCCcCcccc
Q 002827 157 EGEHSAMDG-QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI-IHPLLRKSAV 234 (876)
Q Consensus 157 nEE~SA~~G-~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l-~~p~~~~~~V 234 (876)
-.--|-+.+ .--.+|++-=..--+|+++. ..|.+.++-|-||||.-|..+. ++|+ ..
T Consensus 68 ldsESf~a~h~~~adr~~rH~AyerYv~eE-----------------alpgs~~~sgcsmGayhA~nfvfrhP~----lf 126 (227)
T COG4947 68 LDSESFLATHKNAADRAERHRAYERYVIEE-----------------ALPGSTIVSGCSMGAYHAANFVFRHPH----LF 126 (227)
T ss_pred cchHhHhhhcCCHHHHHHHHHHHHHHHHHh-----------------hcCCCccccccchhhhhhhhhheeChh----Hh
Confidence 533232222 11223333222222333321 1256788899999998888854 6654 47
Q ss_pred cEEEEecC
Q 002827 235 ETVLTLSS 242 (876)
Q Consensus 235 ~~iITL~t 242 (876)
.++|.++.
T Consensus 127 tkvialSG 134 (227)
T COG4947 127 TKVIALSG 134 (227)
T ss_pred hhheeecc
Confidence 78888873
No 175
>PRK10115 protease 2; Provisional
Probab=67.44 E-value=49 Score=41.08 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=26.8
Q ss_pred CCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 204 LPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 204 ~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
.++++.+.|-|.||+++-.++.+ .++..+++|...
T Consensus 522 d~~rl~i~G~S~GG~l~~~~~~~---~Pdlf~A~v~~v 556 (686)
T PRK10115 522 SPSLCYGMGGSAGGMLMGVAINQ---RPELFHGVIAQV 556 (686)
T ss_pred ChHHeEEEEECHHHHHHHHHHhc---ChhheeEEEecC
Confidence 47899999999999999988863 134567766654
No 176
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=64.58 E-value=21 Score=41.26 Aligned_cols=21 Identities=38% Similarity=0.588 Sum_probs=18.4
Q ss_pred CceEEEEEechhHHHHHHHHh
Q 002827 205 PKSVILVGHSVGGFVARAAII 225 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~ 225 (876)
.+.|+|+|-|.||-+|..++.
T Consensus 194 ~~nI~LmGDSAGGnL~Ls~Lq 214 (374)
T PF10340_consen 194 NKNIILMGDSAGGNLALSFLQ 214 (374)
T ss_pred CCeEEEEecCccHHHHHHHHH
Confidence 368999999999999888775
No 177
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=61.82 E-value=18 Score=32.41 Aligned_cols=24 Identities=17% Similarity=0.093 Sum_probs=19.5
Q ss_pred cEEEecCCcccHHhHHHHHHHHHH
Q 002827 85 PVLFIPGNAGSYKQVRSLAAESDR 108 (876)
Q Consensus 85 PVlFIHG~~GS~kqwrsia~~ls~ 108 (876)
-|+++||..+...-...+|+.|.+
T Consensus 18 ~v~i~HG~~eh~~ry~~~a~~L~~ 41 (79)
T PF12146_consen 18 VVVIVHGFGEHSGRYAHLAEFLAE 41 (79)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHh
Confidence 367789999999988888887654
No 178
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=60.91 E-value=88 Score=37.96 Aligned_cols=64 Identities=19% Similarity=0.265 Sum_probs=46.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecC
Q 002827 163 MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (876)
Q Consensus 163 ~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~t 242 (876)
.-|+||+|-++...+.++.+.++..+ ..+++|||-.-||-.+..++.. .++.+..+|.-|+
T Consensus 113 ~pgQTl~DV~~ae~~Fv~~V~~~hp~----------------~~kp~liGnCQgGWa~~mlAA~---~Pd~~gplvlaGa 173 (581)
T PF11339_consen 113 EPGQTLEDVMRAEAAFVEEVAERHPD----------------APKPNLIGNCQGGWAAMMLAAL---RPDLVGPLVLAGA 173 (581)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHhCCC----------------CCCceEEeccHHHHHHHHHHhc---CcCccCceeecCC
Confidence 35788998877777777777665432 2389999999999887776652 2566888888886
Q ss_pred CCC
Q 002827 243 PHQ 245 (876)
Q Consensus 243 Ph~ 245 (876)
|..
T Consensus 174 Pls 176 (581)
T PF11339_consen 174 PLS 176 (581)
T ss_pred Ccc
Confidence 654
No 179
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=60.52 E-value=12 Score=43.34 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=25.8
Q ss_pred CCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 203 SLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 203 ~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
.++++|-++|+||||..+..+..+ .++|+..|..+
T Consensus 223 VD~~RIG~~GfSmGg~~a~~LaAL----DdRIka~v~~~ 257 (390)
T PF12715_consen 223 VDPDRIGCMGFSMGGYRAWWLAAL----DDRIKATVANG 257 (390)
T ss_dssp EEEEEEEEEEEGGGHHHHHHHHHH-----TT--EEEEES
T ss_pred cCccceEEEeecccHHHHHHHHHc----chhhHhHhhhh
Confidence 357899999999999999987764 34687777665
No 180
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=58.50 E-value=10 Score=33.08 Aligned_cols=40 Identities=23% Similarity=0.085 Sum_probs=21.0
Q ss_pred CCCceEEEeeeCCcccchHHhhhccCCCcEEEecCCcccHHhH
Q 002827 57 SARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPGNAGSYKQV 99 (876)
Q Consensus 57 ~~kY~LYlYrEg~~~~~~~~~~~~l~g~PVlFIHG~~GS~kqw 99 (876)
...|-|=++|=-..+. .......+.||++.||+.+|+..|
T Consensus 20 ~DGYiL~l~RIp~~~~---~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 20 EDGYILTLHRIPPGKN---SSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TTSEEEEEEEE-SBTT---CTTTTTT--EEEEE--TT--GGGG
T ss_pred CCCcEEEEEEccCCCC---CcccCCCCCcEEEECCcccChHHH
Confidence 4568888887522110 112234567899999999999988
No 181
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=58.29 E-value=39 Score=38.55 Aligned_cols=28 Identities=21% Similarity=0.290 Sum_probs=20.0
Q ss_pred CCCc-EEEecCCcccHHhHHHHHHHHHHH
Q 002827 82 NGVP-VLFIPGNAGSYKQVRSLAAESDRA 109 (876)
Q Consensus 82 ~g~P-VlFIHG~~GS~kqwrsia~~ls~~ 109 (876)
++-| |||=||+.||----.++.-.++.+
T Consensus 116 ~k~PvvvFSHGLggsRt~YSa~c~~LASh 144 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLYSAYCTSLASH 144 (399)
T ss_pred CCccEEEEecccccchhhHHHHhhhHhhC
Confidence 4557 677899999976666666666654
No 182
>PRK04940 hypothetical protein; Provisional
Probab=57.91 E-value=7.5 Score=40.57 Aligned_cols=20 Identities=20% Similarity=0.421 Sum_probs=17.9
Q ss_pred ceEEEEEechhHHHHHHHHh
Q 002827 206 KSVILVGHSVGGFVARAAII 225 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~ 225 (876)
+++.|||+||||.-|..+..
T Consensus 60 ~~~~liGSSLGGyyA~~La~ 79 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGF 79 (180)
T ss_pred CCcEEEEeChHHHHHHHHHH
Confidence 46899999999999998876
No 183
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=54.58 E-value=25 Score=41.01 Aligned_cols=56 Identities=20% Similarity=0.252 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecC
Q 002827 171 HAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (876)
Q Consensus 171 QAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~t 242 (876)
||-=+-.|+.++...+... ...-+++++|||-||.+|...+. +.|..+++||-=|+
T Consensus 162 qAiD~INAl~~l~k~~~~~-------------~~~lp~I~~G~s~G~yla~l~~k---~aP~~~~~~iDns~ 217 (403)
T PF11144_consen 162 QAIDIINALLDLKKIFPKN-------------GGGLPKIYIGSSHGGYLAHLCAK---IAPWLFDGVIDNSS 217 (403)
T ss_pred HHHHHHHHHHHHHHhhhcc-------------cCCCcEEEEecCcHHHHHHHHHh---hCccceeEEEecCc
Confidence 5555556666666665521 11348999999999999999885 22445888886654
No 184
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=51.46 E-value=19 Score=42.29 Aligned_cols=54 Identities=24% Similarity=0.231 Sum_probs=37.8
Q ss_pred CceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCC-----CCCcccCcchHHHHHH
Q 002827 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ-----SPPLALQPSLGNYFAR 261 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~-----~pPvafD~~l~~~Y~~ 261 (876)
..+|+.+|-|.||++|..+-. .| |..|.+-+.-++|.- .|+-.|+....+-|+.
T Consensus 166 ~~pvIafGGSYGGMLaAWfRl--KY-PHiv~GAlAaSAPvl~f~d~vp~~~f~~ivT~~F~~ 224 (492)
T KOG2183|consen 166 ASPVIAFGGSYGGMLAAWFRL--KY-PHIVLGALAASAPVLYFEDTVPKDVFYRIVTRDFKD 224 (492)
T ss_pred cCcEEEecCchhhHHHHHHHh--cC-hhhhhhhhhccCceEeecCCCCcchhhhHHHHHHHh
Confidence 468999999999999988654 34 445777777776652 4566666666666654
No 185
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=50.65 E-value=61 Score=35.80 Aligned_cols=72 Identities=26% Similarity=0.177 Sum_probs=46.7
Q ss_pred cceeEEEecCCCccCcc-chhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh
Q 002827 147 RRLDWFAVDLEGEHSAM-DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (876)
Q Consensus 147 ~~~D~FavDFnEE~SA~-~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~ 225 (876)
+++-+.+.|+.+-.+.+ +| ..++.-+.|+|+...+.... .+.....++.++|||=||..+..+..
T Consensus 25 ~GyaVv~pDY~Glg~~y~~~---~~~a~avLD~vRAA~~~~~~-----------~gl~~~~~v~l~GySqGG~Aa~~AA~ 90 (290)
T PF03583_consen 25 RGYAVVAPDYEGLGTPYLNG---RSEAYAVLDAVRAARNLPPK-----------LGLSPSSRVALWGYSQGGQAALWAAE 90 (290)
T ss_pred CCCEEEecCCCCCCCcccCc---HhHHHHHHHHHHHHHhcccc-----------cCCCCCCCEEEEeeCccHHHHHHHHH
Confidence 36777888887665544 33 24566677788776554321 01123468999999999999877664
Q ss_pred -CCCcCcc
Q 002827 226 -HPLLRKS 232 (876)
Q Consensus 226 -~p~~~~~ 232 (876)
.+.|.++
T Consensus 91 l~~~YApe 98 (290)
T PF03583_consen 91 LAPSYAPE 98 (290)
T ss_pred HhHHhCcc
Confidence 4567555
No 186
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=49.10 E-value=18 Score=40.52 Aligned_cols=20 Identities=40% Similarity=0.577 Sum_probs=17.1
Q ss_pred ceEEEEEechhHHHHHHHHh
Q 002827 206 KSVILVGHSVGGFVARAAII 225 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~ 225 (876)
..++|-|||+||.+|-.+-.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~ 295 (425)
T COG5153 276 ARIWLTGHSLGGAIASLLGI 295 (425)
T ss_pred ceEEEeccccchHHHHHhcc
Confidence 58999999999999877654
No 187
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=49.10 E-value=18 Score=40.52 Aligned_cols=20 Identities=40% Similarity=0.577 Sum_probs=17.1
Q ss_pred ceEEEEEechhHHHHHHHHh
Q 002827 206 KSVILVGHSVGGFVARAAII 225 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~ 225 (876)
..++|-|||+||.+|-.+-.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~ 295 (425)
T KOG4540|consen 276 ARIWLTGHSLGGAIASLLGI 295 (425)
T ss_pred ceEEEeccccchHHHHHhcc
Confidence 58999999999999877654
No 188
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=48.60 E-value=10 Score=36.55 Aligned_cols=23 Identities=26% Similarity=0.585 Sum_probs=13.5
Q ss_pred ccCCCcEEEecCCcccHHhHHHH
Q 002827 80 QLNGVPVLFIPGNAGSYKQVRSL 102 (876)
Q Consensus 80 ~l~g~PVlFIHG~~GS~kqwrsi 102 (876)
+.+.+|+||+||+-||.-.+..+
T Consensus 89 ~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 89 RPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp -TT-EEEEEE--SS--GGGGHHH
T ss_pred CCCCeEEEEECCCCccHHhHHhh
Confidence 45789999999999998766543
No 189
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=48.14 E-value=23 Score=41.86 Aligned_cols=77 Identities=18% Similarity=0.276 Sum_probs=49.8
Q ss_pred EEEecCCCccCccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcC
Q 002827 151 WFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLR 230 (876)
Q Consensus 151 ~FavDFnEE~SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~ 230 (876)
|++.. .++. -..--|.||..-++-+-+.|-+ .+ -+|++|+|.|||.||..+-.+...|..
T Consensus 159 F~st~-d~~~--~gN~gl~Dq~~AL~wv~~~I~~-FG---------------Gdp~~vTl~G~saGa~~v~~l~~Sp~s- 218 (545)
T KOG1516|consen 159 FLSTG-DSAA--PGNLGLFDQLLALRWVKDNIPS-FG---------------GDPKNVTLFGHSAGAASVSLLTLSPHS- 218 (545)
T ss_pred eeecC-CCCC--CCcccHHHHHHHHHHHHHHHHh-cC---------------CCCCeEEEEeechhHHHHHHHhcCHhh-
Confidence 55555 4433 1223477887766555555421 11 247899999999999999888776654
Q ss_pred cccccEEEEecCCCCCC
Q 002827 231 KSAVETVLTLSSPHQSP 247 (876)
Q Consensus 231 ~~~V~~iITL~tPh~~p 247 (876)
.+..+..|.++.....+
T Consensus 219 ~~LF~~aI~~SG~~~~~ 235 (545)
T KOG1516|consen 219 RGLFHKAISMSGNALSP 235 (545)
T ss_pred HHHHHHHHhhccccccc
Confidence 36677788877666543
No 190
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=46.81 E-value=96 Score=33.35 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=28.9
Q ss_pred CceEEEEEechhHHHHHHHHhC----CCcCcccccEEEEecCCCC
Q 002827 205 PKSVILVGHSVGGFVARAAIIH----PLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~----p~~~~~~V~~iITL~tPh~ 245 (876)
..+++++|+|.|+.||...+.. +.- ....-+.|+++-|.+
T Consensus 47 ~~~vvV~GySQGA~Va~~~~~~l~~~~~~-~~~~l~fVl~gnP~r 90 (225)
T PF08237_consen 47 GGPVVVFGYSQGAVVASNVLRRLAADGDP-PPDDLSFVLIGNPRR 90 (225)
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHhcCCC-CcCceEEEEecCCCC
Confidence 4679999999999999886641 111 113446889998876
No 191
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=44.51 E-value=71 Score=36.86 Aligned_cols=50 Identities=24% Similarity=0.289 Sum_probs=32.3
Q ss_pred ceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCCCCCcccCcchHHHHHHHH
Q 002827 206 KSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQSPPLALQPSLGNYFARVN 263 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~~pPvafD~~l~~~Y~~vn 263 (876)
.+++++|=|.||.+|-.+-. .| |+.|.+.+.=++|... -.+...+++.|.
T Consensus 113 ~pwI~~GgSY~G~Laaw~r~--ky-P~~~~ga~ASSapv~a-----~~df~~y~~~v~ 162 (434)
T PF05577_consen 113 SPWIVFGGSYGGALAAWFRL--KY-PHLFDGAWASSAPVQA-----KVDFWEYFEVVT 162 (434)
T ss_dssp --EEEEEETHHHHHHHHHHH--H--TTT-SEEEEET--CCH-----CCTTTHHHHHHH
T ss_pred CCEEEECCcchhHHHHHHHh--hC-CCeeEEEEeccceeee-----ecccHHHHHHHH
Confidence 58999999999999988764 33 4568999998877763 224456666554
No 192
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=40.59 E-value=43 Score=37.70 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=24.9
Q ss_pred CceEEEEEechhHHHHHHHHhCCCcCcccccEEEEec
Q 002827 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~ 241 (876)
+..=+|.|-||||.+|..+.. +| ++..-.|++.+
T Consensus 176 a~~r~L~G~SlGG~vsL~agl--~~-Pe~FG~V~s~S 209 (299)
T COG2382 176 ADGRVLAGDSLGGLVSLYAGL--RH-PERFGHVLSQS 209 (299)
T ss_pred CCCcEEeccccccHHHHHHHh--cC-chhhceeeccC
Confidence 345689999999999999765 22 45566676665
No 193
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=39.91 E-value=30 Score=42.29 Aligned_cols=70 Identities=23% Similarity=0.247 Sum_probs=43.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecC
Q 002827 163 MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (876)
Q Consensus 163 ~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~t 242 (876)
..|.-+..-+||.-.+.+++.-. .+ ...+..+++|||.|||..||-..... +++.. |..+|+|+=
T Consensus 220 igG~nI~h~ae~~vSf~r~kvle------i~-------gefpha~IiLvGrsmGAlVachVSps-nsdv~-V~~vVCigy 284 (784)
T KOG3253|consen 220 IGGANIKHAAEYSVSFDRYKVLE------IT-------GEFPHAPIILVGRSMGALVACHVSPS-NSDVE-VDAVVCIGY 284 (784)
T ss_pred CCCcchHHHHHHHHHHhhhhhhh------hh-------ccCCCCceEEEecccCceeeEEeccc-cCCce-EEEEEEecc
Confidence 33455666677776666543211 11 12345799999999996666554432 33333 999999998
Q ss_pred CCCCC
Q 002827 243 PHQSP 247 (876)
Q Consensus 243 Ph~~p 247 (876)
|....
T Consensus 285 pl~~v 289 (784)
T KOG3253|consen 285 PLDTV 289 (784)
T ss_pred cccCC
Confidence 77643
No 194
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=39.42 E-value=61 Score=35.30 Aligned_cols=58 Identities=28% Similarity=0.278 Sum_probs=39.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh-CCCcCcccccEEEEecCCC
Q 002827 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSPH 244 (876)
Q Consensus 166 ~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~-~p~~~~~~V~~iITL~tPh 244 (876)
++=.+.++|+-..+-.. ..+++|.+|+||.||.....++. .|. .++|.+|-.-.+|.
T Consensus 170 rt~veh~~yvw~~~v~p--------------------a~~~sv~vvahsyGG~~t~~l~~~f~~--d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 170 RTPVEHAKYVWKNIVLP--------------------AKAESVFVVAHSYGGSLTLDLVERFPD--DESVFAIALTDSAM 227 (297)
T ss_pred cchHHHHHHHHHHHhcc--------------------cCcceEEEEEeccCChhHHHHHHhcCC--ccceEEEEeecccc
Confidence 45556777776655322 23689999999999988877664 443 36777777666664
Q ss_pred C
Q 002827 245 Q 245 (876)
Q Consensus 245 ~ 245 (876)
.
T Consensus 228 ~ 228 (297)
T KOG3967|consen 228 G 228 (297)
T ss_pred c
Confidence 3
No 195
>COG3150 Predicted esterase [General function prediction only]
Probab=37.52 E-value=1e+02 Score=32.55 Aligned_cols=20 Identities=35% Similarity=0.536 Sum_probs=16.8
Q ss_pred ceEEEEEechhHHHHHHHHh
Q 002827 206 KSVILVGHSVGGFVARAAII 225 (876)
Q Consensus 206 ~~ViLVGHSMGGiVAr~~l~ 225 (876)
+++.|||-|+||.-|-.+..
T Consensus 59 ~~p~ivGssLGGY~At~l~~ 78 (191)
T COG3150 59 ESPLIVGSSLGGYYATWLGF 78 (191)
T ss_pred CCceEEeecchHHHHHHHHH
Confidence 35889999999999988664
No 196
>COG0627 Predicted esterase [General function prediction only]
Probab=35.36 E-value=21 Score=40.35 Aligned_cols=31 Identities=29% Similarity=0.565 Sum_probs=21.5
Q ss_pred eEEEEEechhHHHHHHHHh-CCCcCcccccEEEEec
Q 002827 207 SVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLS 241 (876)
Q Consensus 207 ~ViLVGHSMGGiVAr~~l~-~p~~~~~~V~~iITL~ 241 (876)
.--|+||||||.=|..++. +| ++...+..++
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~p----d~f~~~sS~S 184 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHP----DRFKSASSFS 184 (316)
T ss_pred CceeEEEeccchhhhhhhhhCc----chhceecccc
Confidence 5779999999999988654 43 3344444444
No 197
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=33.19 E-value=1.2e+02 Score=40.30 Aligned_cols=97 Identities=21% Similarity=0.224 Sum_probs=61.4
Q ss_pred hccCCCcEEEecCCcccHHhHHHHHHHHHHH-hcCCCCccchhhhhhhccccCCcccccccccccCccccceeEEEecCC
Q 002827 79 KQLNGVPVLFIPGNAGSYKQVRSLAAESDRA-YQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLE 157 (876)
Q Consensus 79 ~~l~g~PVlFIHG~~GS~kqwrsia~~ls~~-y~~~~~~~~~~~~~~i~p~~~~~~~e~~~~~l~~~~~~~~D~FavDFn 157 (876)
...+++|++|+|-.-|.---..++|+.+.-- |. +|-.
T Consensus 2119 ~~se~~~~Ffv~pIEG~tt~l~~la~rle~PaYg--------lQ~T---------------------------------- 2156 (2376)
T KOG1202|consen 2119 VQSEEPPLFFVHPIEGFTTALESLASRLEIPAYG--------LQCT---------------------------------- 2156 (2376)
T ss_pred hcccCCceEEEeccccchHHHHHHHhhcCCcchh--------hhcc----------------------------------
Confidence 3457889999999999988888888866431 11 1110
Q ss_pred CccCccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEE
Q 002827 158 GEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (876)
Q Consensus 158 EE~SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~i 237 (876)
.+.--..+++-|.|.-++|+.+. +..+..|+|.|.|..+|..++.+-+- .+....+
T Consensus 2157 ---~~vP~dSies~A~~yirqirkvQ--------------------P~GPYrl~GYSyG~~l~f~ma~~Lqe-~~~~~~l 2212 (2376)
T KOG1202|consen 2157 ---EAVPLDSIESLAAYYIRQIRKVQ--------------------PEGPYRLAGYSYGACLAFEMASQLQE-QQSPAPL 2212 (2376)
T ss_pred ---ccCCcchHHHHHHHHHHHHHhcC--------------------CCCCeeeeccchhHHHHHHHHHHHHh-hcCCCcE
Confidence 00111356777777766666541 12478999999999999997752211 2234446
Q ss_pred EEec
Q 002827 238 LTLS 241 (876)
Q Consensus 238 ITL~ 241 (876)
|++.
T Consensus 2213 illD 2216 (2376)
T KOG1202|consen 2213 ILLD 2216 (2376)
T ss_pred EEec
Confidence 6654
No 198
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=31.96 E-value=1.7e+02 Score=31.36 Aligned_cols=78 Identities=21% Similarity=0.141 Sum_probs=50.0
Q ss_pred ceeEEEecCCCccCccch-hh-HHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHh
Q 002827 148 RLDWFAVDLEGEHSAMDG-QI-LEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (876)
Q Consensus 148 ~~D~FavDFnEE~SA~~G-~t-L~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~ 225 (876)
++-+..+|..+-..+-.- .. -.++++=..++|+.|..+ .- ...+|-++|.|.+|..+..++.
T Consensus 57 GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Q-pw---------------s~G~VGm~G~SY~G~~q~~~A~ 120 (272)
T PF02129_consen 57 GYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQ-PW---------------SNGKVGMYGISYGGFTQWAAAA 120 (272)
T ss_dssp T-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHC-TT---------------EEEEEEEEEETHHHHHHHHHHT
T ss_pred CCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhC-CC---------------CCCeEEeeccCHHHHHHHHHHh
Confidence 566667776653221110 11 456788888999999765 21 1248999999999999999886
Q ss_pred CCCcCcccccEEEEecCCC
Q 002827 226 HPLLRKSAVETVLTLSSPH 244 (876)
Q Consensus 226 ~p~~~~~~V~~iITL~tPh 244 (876)
. ++..+++|+...++.
T Consensus 121 ~---~~p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 121 R---RPPHLKAIVPQSGWS 136 (272)
T ss_dssp T---T-TTEEEEEEESE-S
T ss_pred c---CCCCceEEEecccCC
Confidence 2 245689998877543
No 199
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=31.87 E-value=40 Score=37.10 Aligned_cols=23 Identities=35% Similarity=0.495 Sum_probs=17.6
Q ss_pred CceEEEEEechhHHHHHHHHhCC
Q 002827 205 PKSVILVGHSVGGFVARAAIIHP 227 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p 227 (876)
..+...|||||||-+.=.+-+++
T Consensus 104 ~~P~y~vgHS~GGqa~gL~~~~~ 126 (281)
T COG4757 104 GHPLYFVGHSFGGQALGLLGQHP 126 (281)
T ss_pred CCceEEeeccccceeecccccCc
Confidence 35789999999997766555554
No 200
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=31.83 E-value=91 Score=35.93 Aligned_cols=45 Identities=24% Similarity=0.170 Sum_probs=29.0
Q ss_pred CceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCCCCCcccCc
Q 002827 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQSPPLALQP 253 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~~pPvafD~ 253 (876)
..++-+.|-||||.+|-.+... + +..|..+-.++ |+...++..++
T Consensus 174 ~~~~g~~G~SmGG~~A~laa~~--~-p~pv~~vp~ls-~~sAs~vFt~G 218 (348)
T PF09752_consen 174 YGPLGLTGISMGGHMAALAASN--W-PRPVALVPCLS-WSSASVVFTEG 218 (348)
T ss_pred CCceEEEEechhHhhHHhhhhc--C-CCceeEEEeec-ccCCCcchhhh
Confidence 3589999999999999887762 2 23355444454 55554444343
No 201
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=31.03 E-value=1.3e+02 Score=33.79 Aligned_cols=69 Identities=20% Similarity=0.328 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhH-HHHHHHHhCCCcCcccccEEEEecCCC
Q 002827 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGG-FVARAAIIHPLLRKSAVETVLTLSSPH 244 (876)
Q Consensus 166 ~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGG-iVAr~~l~~p~~~~~~V~~iITL~tPh 244 (876)
-+|++-||-+.+++++. + .+.|+-+|--.|+ +++|.++.+| ++|.++|.++.=.
T Consensus 80 Psmd~LAe~l~~Vl~~f----~-----------------lk~vIg~GvGAGAnIL~rfAl~~p----~~V~GLiLvn~~~ 134 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHF----G-----------------LKSVIGFGVGAGANILARFALKHP----ERVLGLILVNPTC 134 (283)
T ss_dssp --HHHHHCTHHHHHHHH----T--------------------EEEEEETHHHHHHHHHHHHSG----GGEEEEEEES---
T ss_pred cCHHHHHHHHHHHHHhC----C-----------------ccEEEEEeeccchhhhhhccccCc----cceeEEEEEecCC
Confidence 46788777776666654 3 4689999999999 5566677754 5699999997333
Q ss_pred CCCCcccCcchHHHHHHHHH
Q 002827 245 QSPPLALQPSLGNYFARVND 264 (876)
Q Consensus 245 ~~pPvafD~~l~~~Y~~vn~ 264 (876)
.. -+.++.+|.++..
T Consensus 135 ~~-----~gw~Ew~~~K~~~ 149 (283)
T PF03096_consen 135 TA-----AGWMEWFYQKLSS 149 (283)
T ss_dssp S--------HHHHHHHHHH-
T ss_pred CC-----ccHHHHHHHHHhc
Confidence 32 2456777777654
No 202
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=29.86 E-value=1.2e+02 Score=36.85 Aligned_cols=21 Identities=24% Similarity=0.107 Sum_probs=17.7
Q ss_pred CceEEEEEechhHHHHHHHHh
Q 002827 205 PKSVILVGHSVGGFVARAAII 225 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~ 225 (876)
.++-.++|||||=++|..++.
T Consensus 264 I~Pdav~GHSlGE~aAa~aAG 284 (538)
T TIGR02816 264 IKPDFALGYSKGEASMWASLG 284 (538)
T ss_pred CCCCEEeecCHHHHHHHHHhC
Confidence 355689999999999998875
No 203
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=28.81 E-value=1.6e+02 Score=36.67 Aligned_cols=38 Identities=18% Similarity=0.383 Sum_probs=27.4
Q ss_pred CceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCCC
Q 002827 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQS 246 (876)
Q Consensus 205 p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~~ 246 (876)
++.+.++|-|.||+++-+.+.+ .|+..++||.- .|+..
T Consensus 526 ~~~i~a~GGSAGGmLmGav~N~---~P~lf~~iiA~-VPFVD 563 (682)
T COG1770 526 PDRIVAIGGSAGGMLMGAVANM---APDLFAGIIAQ-VPFVD 563 (682)
T ss_pred ccceEEeccCchhHHHHHHHhh---Chhhhhheeec-CCccc
Confidence 5789999999999999988853 35556666543 34443
No 204
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=28.34 E-value=1.8e+02 Score=36.91 Aligned_cols=92 Identities=14% Similarity=0.064 Sum_probs=54.6
Q ss_pred cceeEEEecCCCccCcc-chhhH-HHHHHHHHHHHHHHHHHhccchhhhhhcccc-CCCCCCceEEEEEechhHHHHHHH
Q 002827 147 RRLDWFAVDLEGEHSAM-DGQIL-EEHAEYVVYAIHRILDQYRESQDAREREGAA-TSGSLPKSVILVGHSVGGFVARAA 223 (876)
Q Consensus 147 ~~~D~FavDFnEE~SA~-~G~tL-~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~-~~~~~p~~ViLVGHSMGGiVAr~~ 223 (876)
+++-+..+|..+-..+- ...+. .++.+=..++|+++...-.. .+.+.++.+ .+.=-..+|-++|.||||.++..+
T Consensus 278 rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~--~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~a 355 (767)
T PRK05371 278 RGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATA--YTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAV 355 (767)
T ss_pred CCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCcc--ccccccccccccCCCCCeeEEEEEcHHHHHHHHH
Confidence 47888999998743311 11233 56777888999998643110 000000000 011114699999999999999987
Q ss_pred HhCCCcCcccccEEEEecCC
Q 002827 224 IIHPLLRKSAVETVLTLSSP 243 (876)
Q Consensus 224 l~~p~~~~~~V~~iITL~tP 243 (876)
+.. .+..+++||..++.
T Consensus 356 Aa~---~pp~LkAIVp~a~i 372 (767)
T PRK05371 356 ATT---GVEGLETIIPEAAI 372 (767)
T ss_pred Hhh---CCCcceEEEeeCCC
Confidence 652 13447888876544
No 205
>PRK15127 multidrug efflux system protein AcrB; Provisional
Probab=27.83 E-value=64 Score=42.03 Aligned_cols=44 Identities=25% Similarity=0.511 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHhcCChhHHHHHHHHHHH--HHHHHHhhcCCCC
Q 002827 734 LSVAVVFFALMRQAYAWDYYLPMPSMLTVVEYNLQMPFPFLLLAILPILV--SLFHSFLMSQPFP 796 (876)
Q Consensus 734 fpv~vv~lvl~~Qf~~y~~~~~f~sf~~aL~~~lr~~~p~l~~~~~~l~~--~~~~~~~~~~~~~ 796 (876)
+.+++|+++|.-||+.| |. |++.+...|+++ +++..+++++++-
T Consensus 879 ~ai~lv~lvL~~~f~s~-----------------~~--pliI~~~IPls~~Ga~~~l~~~g~~l~ 924 (1049)
T PRK15127 879 ISLIVVFLCLAALYESW-----------------SI--PFSVMLVVPLGVIGALLAATFRGLTND 924 (1049)
T ss_pred HHHHHHHHHHHHHHHhh-----------------hh--hHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 33448889999999964 33 444444455544 4555556666543
No 206
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=27.52 E-value=88 Score=34.37 Aligned_cols=63 Identities=16% Similarity=0.183 Sum_probs=42.0
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEE
Q 002827 160 HSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLT 239 (876)
Q Consensus 160 ~SA~~G~tL~dQAeyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iIT 239 (876)
.+++.-.+|.+-+|-+..+|+.|... + ..+.|+|+|||-|.-=...|+++.- .++.|..-|.
T Consensus 78 y~G~Gt~slk~D~edl~~l~~Hi~~~-------------~----fSt~vVL~GhSTGcQdi~yYlTnt~-~~r~iraaIl 139 (299)
T KOG4840|consen 78 YNGYGTFSLKDDVEDLKCLLEHIQLC-------------G----FSTDVVLVGHSTGCQDIMYYLTNTT-KDRKIRAAIL 139 (299)
T ss_pred ccccccccccccHHHHHHHHHHhhcc-------------C----cccceEEEecCccchHHHHHHHhcc-chHHHHHHHH
Confidence 34444467888888888888876311 1 1358999999999988888886422 2344555554
Q ss_pred e
Q 002827 240 L 240 (876)
Q Consensus 240 L 240 (876)
.
T Consensus 140 q 140 (299)
T KOG4840|consen 140 Q 140 (299)
T ss_pred h
Confidence 4
No 207
>PRK10555 aminoglycoside/multidrug efflux system; Provisional
Probab=27.32 E-value=86 Score=40.85 Aligned_cols=17 Identities=35% Similarity=0.655 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHhh
Q 002827 734 LSVAVVFFALMRQAYAW 750 (876)
Q Consensus 734 fpv~vv~lvl~~Qf~~y 750 (876)
+.+++|+++|+-||+-|
T Consensus 877 ~al~lv~~il~~~f~s~ 893 (1037)
T PRK10555 877 ISLLVVFLCLAALYESW 893 (1037)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 34444999999999964
No 208
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=26.74 E-value=1.5e+02 Score=31.87 Aligned_cols=53 Identities=17% Similarity=0.316 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCCC
Q 002827 173 EYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (876)
Q Consensus 173 eyvn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh~ 245 (876)
+=...|++++.+++.+ ....+|.|.|.|+.||..++.. .......|.++.|.+
T Consensus 86 ~Da~aaldW~~~~hp~----------------s~~~~l~GfSFGa~Ia~~la~r----~~e~~~~is~~p~~~ 138 (210)
T COG2945 86 EDAAAALDWLQARHPD----------------SASCWLAGFSFGAYIAMQLAMR----RPEILVFISILPPIN 138 (210)
T ss_pred HHHHHHHHHHHhhCCC----------------chhhhhcccchHHHHHHHHHHh----cccccceeeccCCCC
Confidence 3456788888776542 2346899999999999998752 122566777664433
No 209
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=25.61 E-value=1.6e+02 Score=33.27 Aligned_cols=37 Identities=24% Similarity=0.142 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhccchhhhhhccccCCCCCCceEEEEEechhHHHHHHHHhC
Q 002827 175 VVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH 226 (876)
Q Consensus 175 vn~aI~~IL~lY~~~~~~r~~~~~~~~~~~p~~ViLVGHSMGGiVAr~~l~~ 226 (876)
+..+++.+.++++- +.++|-+-|-|-||-+|.++...
T Consensus 160 ~~~ave~~~sl~~v---------------de~Ri~v~G~SqGGglalaaaal 196 (321)
T COG3458 160 AVRAVEILASLDEV---------------DEERIGVTGGSQGGGLALAAAAL 196 (321)
T ss_pred HHHHHHHHhccCcc---------------chhheEEeccccCchhhhhhhhc
Confidence 34566667777652 46789999999999999887753
No 210
>PF09991 DUF2232: Predicted membrane protein (DUF2232); InterPro: IPR018710 This family of bacterial and eukaryotic proteins has no known fucntion; however this signature belongs to a Pfam Gx transporter clan.
Probab=25.35 E-value=4.5e+02 Score=28.14 Aligned_cols=91 Identities=24% Similarity=0.247 Sum_probs=50.6
Q ss_pred HHhhHHHHHHHHHHHH--HHHhhccCCCCCCHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhhcCCCCCceeeeeehhh
Q 002827 730 QIAGLSVAVVFFALMR--QAYAWDYYLPMPSMLTVVEYNLQMPFPFLLLAILPILVSLFHSFLMSQPFPPIMSFAVVSLI 807 (876)
Q Consensus 730 ~i~~fpv~vv~lvl~~--Qf~~y~~~~~f~sf~~aL~~~lr~~~p~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (876)
.+.++-.+++...+.+ .-|.+++...+|+|. ..|.|-.+..+.+..+...++ .+.. ..+..
T Consensus 166 ~i~~~~~~~~~~~l~~~il~r~~~~~~~~~~~~-----~~~lP~~~~~~~i~~~~~~l~----~~~~--------~~~~~ 228 (290)
T PF09991_consen 166 IISALLMSLINYYLARRILRRLGIPIPPLPPFR-----EWRLPRWLIWLLIVALALSLV----GGGF--------GGSWL 228 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCchH-----HHhCcHHHHHHHHHHHHHHHH----hccc--------chHHH
Confidence 3334444444444433 234455556778884 367777666555444333222 2221 11334
Q ss_pred HHhhhhhhhHHHHHHHHHHHHhhhhhhhhhhhh
Q 002827 808 CYVLANGLIALLILVSQLVFYVTATAHVFIKTR 840 (876)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (876)
-++..|..+++.++ +.++..|++|.++|+|
T Consensus 229 ~~i~~Nl~~v~~~l---~~~qGla~~~~~~~~~ 258 (290)
T PF09991_consen 229 QIIGLNLLIVLSFL---FFIQGLAVIHFFLKRR 258 (290)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHc
Confidence 66777855544443 4588899999999988
No 211
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=24.32 E-value=1.1e+02 Score=32.94 Aligned_cols=34 Identities=18% Similarity=0.239 Sum_probs=23.8
Q ss_pred eEEEEEechhHHHHHHHHhCCCcCcccccEEEEecCCC
Q 002827 207 SVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPH 244 (876)
Q Consensus 207 ~ViLVGHSMGGiVAr~~l~~p~~~~~~V~~iITL~tPh 244 (876)
.|+|||.|||=.||..++....+ -.++-.-|||.
T Consensus 58 ~i~lvAWSmGVw~A~~~l~~~~~----~~aiAINGT~~ 91 (213)
T PF04301_consen 58 EIYLVAWSMGVWAANRVLQGIPF----KRAIAINGTPY 91 (213)
T ss_pred eEEEEEEeHHHHHHHHHhccCCc----ceeEEEECCCC
Confidence 79999999999999888763221 24455556654
No 212
>PF15444 TMEM247: Transmembrane protein 247
Probab=21.84 E-value=98 Score=32.64 Aligned_cols=23 Identities=26% Similarity=0.602 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhH
Q 002827 819 LILVSQLVFYVTATAHVFIKTRW 841 (876)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~ 841 (876)
..+.-|.+|-+|||+-.+||+=|
T Consensus 195 flfskhylfciaaillcliktlw 217 (218)
T PF15444_consen 195 FLFSKHYLFCIAAILLCLIKTLW 217 (218)
T ss_pred HHHHhHHHHHHHHHHHHHHHHhc
Confidence 34455889999999999999988
No 213
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=20.93 E-value=4.2e+02 Score=30.39 Aligned_cols=54 Identities=24% Similarity=0.279 Sum_probs=38.3
Q ss_pred CceEEEEEechhH-HHHHHHHhCCCcCcccccEEEEecCCCCCCCcccCcchHHHHHHHH-HHHH
Q 002827 205 PKSVILVGHSVGG-FVARAAIIHPLLRKSAVETVLTLSSPHQSPPLALQPSLGNYFARVN-DEWR 267 (876)
Q Consensus 205 p~~ViLVGHSMGG-iVAr~~l~~p~~~~~~V~~iITL~tPh~~pPvafD~~l~~~Y~~vn-~~W~ 267 (876)
-+.|+=+|--.|. +++|.++.|| ++|-++|.++.--.++ +.++.+|.+++ ++|+
T Consensus 121 lk~vIg~GvGAGAyIL~rFAl~hp----~rV~GLvLIn~~~~a~-----gwiew~~~K~~s~~l~ 176 (326)
T KOG2931|consen 121 LKSVIGMGVGAGAYILARFALNHP----ERVLGLVLINCDPCAK-----GWIEWAYNKVSSNLLY 176 (326)
T ss_pred cceEEEecccccHHHHHHHHhcCh----hheeEEEEEecCCCCc-----hHHHHHHHHHHHHHHH
Confidence 3689999999999 5566677765 5699999987433332 45678887775 5655
Done!