Query 002832
Match_columns 875
No_of_seqs 430 out of 3550
Neff 8.3
Searched_HMMs 46136
Date Thu Mar 28 11:41:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002832.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002832hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 1E-147 2E-152 1236.5 57.7 830 16-854 2-971 (972)
2 KOG0205 Plasma membrane H+-tra 100.0 2E-145 3E-150 1180.3 43.9 855 8-866 8-862 (942)
3 PRK10517 magnesium-transportin 100.0 2E-135 4E-140 1239.0 90.3 810 13-852 44-899 (902)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 2E-135 4E-140 1253.0 88.7 825 14-854 3-1050(1053)
5 PRK15122 magnesium-transportin 100.0 5E-135 1E-139 1236.7 90.5 816 16-852 25-898 (903)
6 TIGR01647 ATPase-IIIA_H plasma 100.0 9E-135 2E-139 1219.7 85.8 749 36-810 1-753 (755)
7 TIGR01524 ATPase-IIIB_Mg magne 100.0 1E-133 3E-138 1223.6 89.7 808 14-851 11-862 (867)
8 COG0474 MgtA Cation transport 100.0 6E-134 1E-138 1229.5 79.8 806 14-835 19-898 (917)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 4E-129 9E-134 1201.3 89.5 837 14-852 13-986 (997)
10 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2E-128 4E-133 1185.7 90.2 800 16-852 2-883 (884)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 2E-126 3E-131 1175.9 89.0 816 22-848 43-938 (941)
12 KOG0204 Calcium transporting A 100.0 1E-128 2E-133 1081.8 49.5 811 23-848 103-1005(1034)
13 KOG0203 Na+/K+ ATPase, alpha s 100.0 4E-124 9E-129 1043.7 32.3 854 3-860 23-1014(1019)
14 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2E-118 5E-123 1099.2 82.7 783 65-850 1-917 (917)
15 TIGR01657 P-ATPase-V P-type AT 100.0 3E-115 7E-120 1084.4 76.9 736 34-787 137-1002(1054)
16 TIGR01652 ATPase-Plipid phosph 100.0 2E-100 3E-105 956.0 66.6 789 49-859 1-1054(1057)
17 PRK14010 potassium-transportin 100.0 2.2E-99 5E-104 882.2 57.3 546 67-669 28-588 (673)
18 PRK01122 potassium-transportin 100.0 7E-96 2E-100 853.6 60.8 536 67-658 29-581 (679)
19 PLN03190 aminophospholipid tra 100.0 1.4E-93 3.1E-98 883.2 70.1 790 47-864 85-1154(1178)
20 KOG0208 Cation transport ATPas 100.0 2.5E-93 5.4E-98 808.2 50.8 656 25-695 149-961 (1140)
21 TIGR01497 kdpB K+-transporting 100.0 9.9E-91 2.1E-95 808.3 59.3 539 67-660 28-584 (675)
22 COG2217 ZntA Cation transport 100.0 3.9E-88 8.6E-93 787.6 57.3 504 98-665 175-680 (713)
23 PRK11033 zntA zinc/cadmium/mer 100.0 3.3E-82 7.1E-87 760.7 59.2 500 96-663 205-707 (741)
24 KOG0207 Cation transport ATPas 100.0 3.3E-83 7.2E-88 727.5 38.3 533 101-689 345-890 (951)
25 TIGR01494 ATPase_P-type ATPase 100.0 2.2E-79 4.7E-84 713.6 53.4 473 105-665 4-482 (499)
26 TIGR01512 ATPase-IB2_Cd heavy 100.0 2.5E-78 5.3E-83 706.6 54.4 499 76-663 4-505 (536)
27 TIGR01525 ATPase-IB_hvy heavy 100.0 1.3E-77 2.8E-82 705.1 57.9 517 77-664 5-527 (556)
28 TIGR01511 ATPase-IB1_Cu copper 100.0 2.3E-77 4.9E-82 700.6 58.6 505 97-678 54-560 (562)
29 PRK10671 copA copper exporting 100.0 5.4E-76 1.2E-80 721.0 60.9 522 97-681 285-810 (834)
30 KOG0206 P-type ATPase [General 100.0 1.6E-79 3.5E-84 731.5 26.6 797 45-865 28-1090(1151)
31 KOG0210 P-type ATPase [Inorgan 100.0 1.2E-76 2.7E-81 646.3 40.5 769 44-860 74-1049(1051)
32 KOG0209 P-type ATPase [Inorgan 100.0 1.2E-75 2.7E-80 649.5 48.0 571 22-611 149-833 (1160)
33 COG2216 KdpB High-affinity K+ 100.0 7.3E-66 1.6E-70 548.9 34.2 520 69-643 30-568 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.4E-35 3E-40 311.5 23.9 220 103-323 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 1.3E-26 2.9E-31 240.4 10.2 211 327-604 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 1E-15 2.2E-20 136.8 10.8 123 482-635 20-145 (152)
37 PF00690 Cation_ATPase_N: Cati 99.4 2.7E-13 5.8E-18 113.4 7.3 67 18-84 1-69 (69)
38 KOG4383 Uncharacterized conser 99.3 1.8E-09 3.8E-14 120.2 29.9 208 481-688 815-1129(1354)
39 PF00689 Cation_ATPase_C: Cati 99.2 9.8E-11 2.1E-15 118.3 14.6 167 672-848 1-182 (182)
40 smart00831 Cation_ATPase_N Cat 99.1 1.8E-10 4E-15 94.8 7.0 59 29-87 2-62 (64)
41 TIGR02137 HSK-PSP phosphoserin 99.0 2E-09 4.3E-14 110.2 12.2 131 492-639 68-198 (203)
42 PRK11133 serB phosphoserine ph 98.9 4.9E-09 1.1E-13 114.5 11.0 131 492-637 181-316 (322)
43 TIGR00338 serB phosphoserine p 98.9 7.1E-09 1.5E-13 107.9 10.6 129 492-635 85-218 (219)
44 PF13246 Hydrolase_like2: Puta 98.8 9.4E-09 2E-13 90.8 6.6 66 373-439 19-90 (91)
45 PRK01158 phosphoglycolate phos 98.8 4E-08 8.6E-13 103.1 11.6 153 485-637 12-226 (230)
46 TIGR01487 SPP-like sucrose-pho 98.8 2.6E-08 5.5E-13 103.5 9.5 144 492-635 18-214 (215)
47 TIGR02726 phenyl_P_delta pheny 98.8 3.8E-08 8.2E-13 97.3 10.0 100 499-628 41-142 (169)
48 PRK10513 sugar phosphate phosp 98.7 7.4E-08 1.6E-12 103.8 11.6 66 572-637 196-265 (270)
49 TIGR01670 YrbI-phosphatas 3-de 98.7 9.6E-08 2.1E-12 93.5 10.7 97 500-628 36-136 (154)
50 COG0561 Cof Predicted hydrolas 98.7 1.4E-07 2.9E-12 101.3 12.7 154 485-638 12-259 (264)
51 COG0560 SerB Phosphoserine pho 98.7 1.1E-07 2.5E-12 97.7 10.6 106 491-615 76-191 (212)
52 TIGR01482 SPP-subfamily Sucros 98.6 1.8E-07 4E-12 97.7 11.2 145 492-636 15-221 (225)
53 PRK15126 thiamin pyrimidine py 98.6 1.8E-07 3.9E-12 100.9 10.3 66 572-637 188-259 (272)
54 PRK10976 putative hydrolase; P 98.6 2.4E-07 5.3E-12 99.5 11.0 66 572-637 190-261 (266)
55 PRK13582 thrH phosphoserine ph 98.6 4.4E-07 9.5E-12 93.4 12.5 128 492-636 68-195 (205)
56 PRK09484 3-deoxy-D-manno-octul 98.5 3E-07 6.4E-12 92.8 8.5 108 499-638 55-170 (183)
57 PRK10530 pyridoxal phosphate ( 98.5 8.6E-07 1.9E-11 95.5 11.8 66 572-637 199-268 (272)
58 PF08282 Hydrolase_3: haloacid 98.5 7.5E-07 1.6E-11 94.2 11.0 143 491-636 14-254 (254)
59 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.5 7E-07 1.5E-11 91.4 9.8 117 492-621 80-200 (201)
60 PRK08238 hypothetical protein; 98.4 0.00015 3.2E-09 83.7 29.6 101 492-617 72-172 (479)
61 PLN02887 hydrolase family prot 98.4 8.9E-07 1.9E-11 103.7 10.8 52 586-637 525-576 (580)
62 TIGR03333 salvage_mtnX 2-hydro 98.4 2.7E-06 5.9E-11 88.2 11.4 135 491-637 69-209 (214)
63 TIGR00099 Cof-subfamily Cof su 98.3 1.8E-06 4E-11 92.2 10.1 64 572-635 188-255 (256)
64 PF12710 HAD: haloacid dehalog 98.3 8.1E-07 1.8E-11 90.2 6.2 92 495-601 92-192 (192)
65 TIGR01486 HAD-SF-IIB-MPGP mann 98.3 7.8E-06 1.7E-10 87.3 13.9 66 572-637 176-253 (256)
66 COG1778 Low specificity phosph 98.3 2.5E-06 5.4E-11 80.2 7.7 113 500-644 43-163 (170)
67 PLN02954 phosphoserine phospha 98.2 8.3E-06 1.8E-10 85.1 12.1 125 492-634 84-221 (224)
68 KOG1615 Phosphoserine phosphat 98.2 2.5E-06 5.4E-11 82.7 6.6 110 492-610 88-199 (227)
69 PRK03669 mannosyl-3-phosphogly 98.2 1.8E-05 3.9E-10 85.3 13.3 67 571-637 186-265 (271)
70 PRK00192 mannosyl-3-phosphogly 98.1 3.2E-05 6.9E-10 83.5 13.4 66 572-637 190-267 (273)
71 PRK09552 mtnX 2-hydroxy-3-keto 98.1 1.4E-05 3E-10 83.2 10.1 132 492-636 74-212 (219)
72 TIGR01488 HAD-SF-IB Haloacid D 98.1 7.7E-06 1.7E-10 81.9 6.9 101 492-603 73-177 (177)
73 PRK13222 phosphoglycolate phos 98.0 3.5E-05 7.5E-10 80.5 11.9 127 491-638 92-223 (226)
74 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 1.1E-05 2.4E-10 81.6 7.8 113 491-608 71-186 (188)
75 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.9 2.5E-05 5.3E-10 80.1 8.1 108 490-610 85-197 (202)
76 COG0546 Gph Predicted phosphat 97.9 9.9E-05 2.1E-09 76.9 11.3 126 490-637 87-218 (220)
77 TIGR01454 AHBA_synth_RP 3-amin 97.8 0.00011 2.3E-09 75.6 10.5 124 492-636 75-203 (205)
78 cd01427 HAD_like Haloacid deha 97.7 0.00011 2.3E-09 69.3 7.9 118 488-608 20-138 (139)
79 PRK13223 phosphoglycolate phos 97.6 0.0004 8.8E-09 74.8 10.6 125 491-636 100-229 (272)
80 PRK13288 pyrophosphatase PpaX; 97.5 0.00042 9.1E-09 71.8 10.0 124 492-636 82-210 (214)
81 TIGR01485 SPP_plant-cyano sucr 97.4 0.00035 7.7E-09 74.2 8.3 148 490-637 19-244 (249)
82 TIGR02461 osmo_MPG_phos mannos 97.4 0.0006 1.3E-08 71.2 9.7 43 490-532 13-55 (225)
83 TIGR01449 PGP_bact 2-phosphogl 97.4 0.00055 1.2E-08 70.7 9.3 122 492-634 85-211 (213)
84 TIGR02471 sucr_syn_bact_C sucr 97.2 0.00042 9E-09 73.0 5.8 66 572-637 159-232 (236)
85 PRK10826 2-deoxyglucose-6-phos 97.2 0.0017 3.7E-08 67.6 9.4 119 491-633 91-216 (222)
86 TIGR03351 PhnX-like phosphonat 97.1 0.0022 4.9E-08 66.6 10.1 126 491-635 86-218 (220)
87 TIGR01544 HAD-SF-IE haloacid d 97.1 0.0052 1.1E-07 65.4 12.7 128 491-637 120-274 (277)
88 TIGR02463 MPGP_rel mannosyl-3- 97.1 0.0034 7.3E-08 65.3 11.1 39 494-532 18-56 (221)
89 PRK10187 trehalose-6-phosphate 97.1 0.0043 9.3E-08 66.5 11.8 138 492-635 36-239 (266)
90 PRK13226 phosphoglycolate phos 97.1 0.0028 6E-08 66.5 10.2 124 492-636 95-224 (229)
91 PRK13225 phosphoglycolate phos 97.1 0.0057 1.2E-07 65.8 12.7 121 492-636 142-267 (273)
92 PRK13478 phosphonoacetaldehyde 96.9 0.0071 1.5E-07 65.0 11.5 93 492-605 101-197 (267)
93 PLN03243 haloacid dehalogenase 96.9 0.0059 1.3E-07 65.2 10.6 121 492-633 109-231 (260)
94 COG4030 Uncharacterized protei 96.9 0.0092 2E-07 59.7 10.7 145 492-637 83-262 (315)
95 TIGR01422 phosphonatase phosph 96.8 0.009 1.9E-07 63.6 11.2 97 492-606 99-196 (253)
96 PRK11590 hypothetical protein; 96.8 0.0069 1.5E-07 62.6 9.7 106 492-611 95-203 (211)
97 PLN02770 haloacid dehalogenase 96.7 0.01 2.2E-07 63.1 10.7 116 492-626 108-227 (248)
98 TIGR01545 YfhB_g-proteo haloac 96.7 0.0066 1.4E-07 62.6 9.0 106 492-611 94-202 (210)
99 TIGR01548 HAD-SF-IA-hyp1 haloa 96.7 0.0028 6E-08 64.7 6.1 94 490-603 104-197 (197)
100 PRK14502 bifunctional mannosyl 96.7 0.011 2.3E-07 69.9 11.2 48 485-532 425-473 (694)
101 PRK12702 mannosyl-3-phosphogly 96.6 0.015 3.2E-07 62.0 10.6 42 492-533 18-59 (302)
102 PRK11009 aphA acid phosphatase 96.5 0.0061 1.3E-07 63.7 7.4 89 492-606 114-206 (237)
103 PLN02382 probable sucrose-phos 96.5 0.0042 9.1E-08 70.8 6.3 48 572-619 175-230 (413)
104 PRK11587 putative phosphatase; 96.5 0.014 3E-07 60.6 9.7 113 492-624 83-197 (218)
105 TIGR01484 HAD-SF-IIB HAD-super 96.4 0.0099 2.1E-07 60.9 8.2 39 492-530 17-55 (204)
106 PRK06698 bifunctional 5'-methy 96.4 0.012 2.6E-07 68.5 9.3 123 492-638 330-455 (459)
107 COG4359 Uncharacterized conser 96.4 0.0061 1.3E-07 59.1 5.6 111 492-608 73-183 (220)
108 TIGR02253 CTE7 HAD superfamily 96.3 0.015 3.2E-07 60.3 9.0 98 492-610 94-195 (221)
109 PRK08942 D,D-heptose 1,7-bisph 96.3 0.025 5.5E-07 56.8 10.1 128 492-637 29-177 (181)
110 TIGR01428 HAD_type_II 2-haloal 96.1 0.017 3.7E-07 58.9 8.1 94 492-606 92-187 (198)
111 PRK14501 putative bifunctional 96.1 0.053 1.1E-06 66.9 13.2 170 448-636 481-720 (726)
112 TIGR01672 AphA HAD superfamily 96.0 0.0091 2E-07 62.5 5.5 88 493-606 115-206 (237)
113 PHA02530 pseT polynucleotide k 96.0 0.022 4.7E-07 62.3 8.4 109 488-607 183-292 (300)
114 PRK06769 hypothetical protein; 95.9 0.035 7.5E-07 55.4 8.8 98 493-608 29-134 (173)
115 TIGR01990 bPGM beta-phosphoglu 95.8 0.013 2.9E-07 58.8 5.7 94 492-606 87-180 (185)
116 PLN02779 haloacid dehalogenase 95.8 0.034 7.4E-07 60.3 9.1 122 492-632 144-268 (286)
117 TIGR01662 HAD-SF-IIIA HAD-supe 95.8 0.036 7.7E-07 52.5 8.0 92 491-605 24-125 (132)
118 TIGR02254 YjjG/YfnB HAD superf 95.8 0.034 7.4E-07 57.7 8.5 121 492-634 97-222 (224)
119 PRK14988 GMP/IMP nucleotidase; 95.7 0.031 6.7E-07 58.4 7.7 99 492-611 93-195 (224)
120 PLN02575 haloacid dehalogenase 95.6 0.059 1.3E-06 60.2 10.1 120 492-632 216-337 (381)
121 TIGR01509 HAD-SF-IA-v3 haloaci 95.6 0.039 8.4E-07 55.1 8.0 94 492-605 85-178 (183)
122 PF13419 HAD_2: Haloacid dehal 95.6 0.011 2.5E-07 58.2 4.1 97 491-606 76-172 (176)
123 PF06888 Put_Phosphatase: Puta 95.4 0.035 7.6E-07 57.8 6.9 103 492-601 71-187 (234)
124 TIGR02009 PGMB-YQAB-SF beta-ph 95.3 0.029 6.3E-07 56.3 5.8 92 492-606 88-181 (185)
125 PRK09449 dUMP phosphatase; Pro 95.2 0.076 1.6E-06 55.2 8.8 123 492-636 95-222 (224)
126 smart00775 LNS2 LNS2 domain. T 95.2 0.11 2.3E-06 51.0 9.2 102 490-605 25-140 (157)
127 TIGR01685 MDP-1 magnesium-depe 95.2 0.06 1.3E-06 53.6 7.5 108 486-609 39-155 (174)
128 PLN02940 riboflavin kinase 95.1 0.072 1.6E-06 60.2 8.7 114 492-624 93-210 (382)
129 TIGR00213 GmhB_yaeD D,D-heptos 95.0 0.13 2.8E-06 51.4 9.3 26 493-518 27-52 (176)
130 PF05116 S6PP: Sucrose-6F-phos 94.9 0.12 2.6E-06 54.8 9.2 45 571-615 164-212 (247)
131 COG2179 Predicted hydrolase of 94.8 0.15 3.3E-06 49.2 8.7 109 451-605 20-132 (175)
132 TIGR01656 Histidinol-ppas hist 94.7 0.069 1.5E-06 51.7 6.5 97 492-606 27-140 (147)
133 PLN02580 trehalose-phosphatase 94.5 0.2 4.4E-06 56.0 10.1 67 566-636 292-373 (384)
134 TIGR02252 DREG-2 REG-2-like, H 94.3 0.11 2.4E-06 53.1 7.0 94 492-605 105-199 (203)
135 PTZ00174 phosphomannomutase; P 94.2 0.034 7.4E-07 59.0 3.2 54 571-624 187-245 (247)
136 TIGR01668 YqeG_hyp_ppase HAD s 94.0 0.14 3E-06 51.0 6.9 108 454-606 20-131 (170)
137 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.8 0.55 1.2E-05 49.5 11.5 94 485-604 17-115 (242)
138 TIGR01549 HAD-SF-IA-v1 haloaci 93.7 0.085 1.9E-06 51.2 4.8 91 492-604 64-154 (154)
139 TIGR01261 hisB_Nterm histidino 93.7 0.12 2.7E-06 50.8 5.8 99 492-608 29-144 (161)
140 TIGR01533 lipo_e_P4 5'-nucleot 93.3 0.35 7.5E-06 51.6 8.8 86 490-600 116-204 (266)
141 PLN02811 hydrolase 93.3 0.19 4.1E-06 52.2 6.7 98 492-608 78-181 (220)
142 smart00577 CPDc catalytic doma 93.0 0.11 2.4E-06 50.3 4.2 93 491-608 44-139 (148)
143 PRK05446 imidazole glycerol-ph 92.8 0.22 4.7E-06 55.3 6.7 97 491-607 29-144 (354)
144 TIGR00685 T6PP trehalose-phosp 92.2 0.22 4.7E-06 52.7 5.6 66 567-636 162-239 (244)
145 TIGR01691 enolase-ppase 2,3-di 92.2 0.36 7.7E-06 50.1 6.9 99 490-609 93-194 (220)
146 TIGR01675 plant-AP plant acid 92.2 0.52 1.1E-05 48.9 8.0 87 491-597 119-209 (229)
147 PLN02919 haloacid dehalogenase 91.5 0.93 2E-05 58.1 11.0 115 492-626 161-281 (1057)
148 TIGR01681 HAD-SF-IIIC HAD-supe 91.5 0.49 1.1E-05 44.6 6.5 39 492-530 29-68 (128)
149 KOG3040 Predicted sugar phosph 91.4 0.93 2E-05 45.3 8.3 50 482-531 13-65 (262)
150 PF09419 PGP_phosphatase: Mito 91.0 0.6 1.3E-05 46.0 6.7 102 454-599 36-152 (168)
151 TIGR02247 HAD-1A3-hyp Epoxide 90.9 0.25 5.4E-06 50.8 4.1 97 491-606 93-191 (211)
152 TIGR01664 DNA-3'-Pase DNA 3'-p 90.4 0.82 1.8E-05 45.2 7.2 40 493-532 43-94 (166)
153 PLN02205 alpha,alpha-trehalose 90.2 1.1 2.4E-05 55.9 9.5 67 449-528 586-653 (854)
154 PRK09456 ?-D-glucose-1-phospha 89.2 0.93 2E-05 46.1 6.8 97 492-607 84-181 (199)
155 COG3769 Predicted hydrolase (H 89.2 2.8 6E-05 42.5 9.5 37 496-532 27-63 (274)
156 PLN03017 trehalose-phosphatase 88.9 7.5 0.00016 43.3 13.8 61 452-526 104-166 (366)
157 PRK10563 6-phosphogluconate ph 88.2 1.1 2.4E-05 46.4 6.6 97 492-609 88-184 (221)
158 KOG3120 Predicted haloacid deh 87.9 2.9 6.3E-05 42.4 8.8 116 492-613 84-213 (256)
159 PLN02645 phosphoglycolate phos 87.6 1.3 2.8E-05 48.7 7.0 48 485-532 37-87 (311)
160 TIGR01686 FkbH FkbH-like domai 86.5 1.4 3.1E-05 48.5 6.6 91 492-610 31-129 (320)
161 PRK10725 fructose-1-P/6-phosph 85.4 1.8 3.8E-05 43.4 6.2 93 493-606 89-181 (188)
162 PHA02597 30.2 hypothetical pro 83.4 3.5 7.5E-05 41.8 7.3 91 492-607 74-170 (197)
163 TIGR01993 Pyr-5-nucltdase pyri 83.1 1.5 3.2E-05 43.9 4.4 97 492-606 84-180 (184)
164 PF13344 Hydrolase_6: Haloacid 82.1 0.8 1.7E-05 41.2 1.8 48 485-532 7-57 (101)
165 PF03767 Acid_phosphat_B: HAD 78.0 3.1 6.6E-05 43.5 4.8 89 492-599 115-207 (229)
166 TIGR01452 PGP_euk phosphoglyco 77.4 22 0.00048 38.2 11.5 48 485-532 11-61 (279)
167 COG0637 Predicted phosphatase/ 74.5 7.9 0.00017 40.2 6.8 98 491-607 85-182 (221)
168 TIGR01680 Veg_Stor_Prot vegeta 72.7 15 0.00033 39.1 8.2 88 490-597 143-235 (275)
169 PRK10444 UMP phosphatase; Prov 71.3 3.8 8.3E-05 43.4 3.5 45 485-529 10-54 (248)
170 TIGR01684 viral_ppase viral ph 70.4 6.6 0.00014 42.2 5.0 41 493-533 146-187 (301)
171 TIGR01458 HAD-SF-IIA-hyp3 HAD- 69.9 5.1 0.00011 42.7 4.1 48 485-532 10-64 (257)
172 PRK10748 flavin mononucleotide 69.1 9 0.00019 40.2 5.8 91 492-609 113-206 (238)
173 TIGR01517 ATPase-IIB_Ca plasma 69.0 48 0.001 42.4 13.2 200 100-306 135-359 (941)
174 PHA03398 viral phosphatase sup 68.7 7.4 0.00016 41.9 4.9 40 493-532 148-188 (303)
175 TIGR01457 HAD-SF-IIA-hyp2 HAD- 68.0 9 0.0002 40.6 5.5 48 485-532 10-60 (249)
176 PTZ00445 p36-lilke protein; Pr 66.9 9.3 0.0002 39.0 5.0 63 444-519 28-102 (219)
177 PLN02151 trehalose-phosphatase 65.8 65 0.0014 35.9 11.7 61 572-636 269-341 (354)
178 PLN02177 glycerol-3-phosphate 65.4 24 0.00052 41.3 8.8 98 493-611 111-215 (497)
179 TIGR02251 HIF-SF_euk Dullard-l 65.3 3.3 7.1E-05 40.8 1.4 41 491-532 41-81 (162)
180 COG1011 Predicted hydrolase (H 65.1 21 0.00045 36.7 7.6 119 492-636 99-226 (229)
181 PF08235 LNS2: LNS2 (Lipin/Ned 63.8 39 0.00084 33.0 8.4 103 491-606 26-141 (157)
182 COG0474 MgtA Cation transport 63.7 1.2E+02 0.0026 38.7 15.1 271 17-305 41-330 (917)
183 PRK14194 bifunctional 5,10-met 60.6 31 0.00068 37.4 7.9 138 489-626 12-209 (301)
184 TIGR01493 HAD-SF-IA-v2 Haloaci 59.8 9.1 0.0002 37.7 3.5 86 492-603 90-175 (175)
185 TIGR02244 HAD-IG-Ncltidse HAD 57.6 40 0.00088 37.4 8.3 105 494-604 186-316 (343)
186 COG0241 HisB Histidinol phosph 57.5 33 0.00071 34.4 6.8 98 493-609 32-146 (181)
187 TIGR01458 HAD-SF-IIA-hyp3 HAD- 56.2 22 0.00047 37.9 5.8 118 495-635 123-253 (257)
188 COG3700 AphA Acid phosphatase 56.0 18 0.00039 35.5 4.5 89 493-609 115-210 (237)
189 TIGR01663 PNK-3'Pase polynucle 55.3 27 0.00058 41.2 6.8 40 493-532 198-249 (526)
190 PRK14188 bifunctional 5,10-met 52.6 48 0.001 36.0 7.7 138 489-626 10-208 (296)
191 TIGR01689 EcbF-BcbF capsule bi 52.1 13 0.00029 34.8 2.9 31 491-521 23-53 (126)
192 TIGR01647 ATPase-IIIA_H plasma 51.9 2.4E+02 0.0051 35.2 14.7 191 108-308 63-263 (755)
193 CHL00200 trpA tryptophan synth 51.3 72 0.0016 34.1 8.7 90 489-600 125-217 (263)
194 PLN02423 phosphomannomutase 51.0 21 0.00045 37.7 4.7 40 571-611 188-232 (245)
195 TIGR01494 ATPase_P-type ATPase 50.6 18 0.00038 42.7 4.5 149 140-306 53-213 (499)
196 PTZ00174 phosphomannomutase; P 49.4 21 0.00046 37.6 4.5 41 485-525 14-55 (247)
197 COG0647 NagD Predicted sugar p 48.5 18 0.00038 38.7 3.6 99 483-610 15-116 (269)
198 PLN02591 tryptophan synthase 48.5 84 0.0018 33.3 8.6 81 495-597 118-201 (250)
199 TIGR01106 ATPase-IIC_X-K sodiu 47.6 4.1E+02 0.0089 34.4 16.2 200 100-303 110-324 (997)
200 PRK14174 bifunctional 5,10-met 47.2 56 0.0012 35.5 7.2 138 489-626 9-213 (295)
201 PRK14184 bifunctional 5,10-met 47.2 56 0.0012 35.3 7.1 138 489-626 9-211 (286)
202 TIGR00262 trpA tryptophan synt 47.1 78 0.0017 33.7 8.2 41 489-529 121-163 (256)
203 PF05822 UMPH-1: Pyrimidine 5' 46.3 1.1E+02 0.0024 32.2 8.9 134 491-636 89-241 (246)
204 PF13380 CoA_binding_2: CoA bi 46.2 28 0.0006 32.1 4.1 39 493-531 64-103 (116)
205 TIGR01456 CECR5 HAD-superfamil 46.0 76 0.0017 34.9 8.3 49 484-532 8-64 (321)
206 PF00389 2-Hacid_dh: D-isomer 45.1 1.7E+02 0.0037 27.3 9.5 70 574-650 52-123 (133)
207 PRK14179 bifunctional 5,10-met 44.3 67 0.0014 34.7 7.2 138 489-626 10-208 (284)
208 PRK15424 propionate catabolism 43.5 2.3E+02 0.0051 33.6 12.1 70 496-595 95-165 (538)
209 PF12368 DUF3650: Protein of u 42.8 20 0.00043 24.0 1.8 15 34-48 13-27 (28)
210 PF06506 PrpR_N: Propionate ca 41.9 86 0.0019 31.1 7.2 67 564-648 105-172 (176)
211 PRK11507 ribosome-associated p 40.9 32 0.00069 28.6 3.1 27 136-162 37-63 (70)
212 TIGR01524 ATPase-IIIB_Mg magne 40.7 7.7E+02 0.017 31.3 16.9 195 103-303 98-316 (867)
213 COG0272 Lig NAD-dependent DNA 40.3 35 0.00075 40.8 4.6 65 147-221 363-429 (667)
214 PRK10517 magnesium-transportin 40.2 6.9E+02 0.015 31.9 16.4 19 156-174 174-192 (902)
215 TIGR01657 P-ATPase-V P-type AT 40.1 9.7E+02 0.021 31.2 18.8 74 104-188 197-273 (1054)
216 PF12689 Acid_PPase: Acid Phos 40.0 50 0.0011 32.7 5.1 41 492-532 45-86 (169)
217 PRK14170 bifunctional 5,10-met 39.8 42 0.00091 36.1 4.8 138 489-626 10-207 (284)
218 PF06570 DUF1129: Protein of u 39.7 4.3E+02 0.0092 27.0 12.9 8 845-852 194-201 (206)
219 PRK14175 bifunctional 5,10-met 39.7 43 0.00093 36.2 4.9 45 489-533 11-64 (286)
220 TIGR02250 FCP1_euk FCP1-like p 39.1 49 0.0011 32.2 4.8 41 491-532 57-97 (156)
221 TIGR00612 ispG_gcpE 1-hydroxy- 38.9 54 0.0012 35.9 5.4 147 445-613 151-319 (346)
222 TIGR01522 ATPase-IIA2_Ca golgi 38.7 4.6E+02 0.01 33.3 14.7 199 103-306 90-307 (884)
223 PRK15122 magnesium-transportin 38.6 9.5E+02 0.021 30.7 18.7 197 102-305 119-351 (903)
224 PRK14167 bifunctional 5,10-met 36.8 51 0.0011 35.8 4.9 137 489-625 10-210 (297)
225 PRK13111 trpA tryptophan synth 36.3 4.2E+02 0.0092 28.2 11.7 84 493-598 127-213 (258)
226 PRK14169 bifunctional 5,10-met 36.2 54 0.0012 35.3 4.9 138 489-626 9-206 (282)
227 PRK00652 lpxK tetraacyldisacch 35.7 72 0.0016 35.2 6.0 58 574-631 69-154 (325)
228 TIGR02329 propionate_PrpR prop 35.5 3.8E+02 0.0081 31.8 12.2 103 496-646 85-189 (526)
229 PF09925 DUF2157: Predicted me 35.4 1.9E+02 0.0041 27.7 8.2 47 35-88 7-54 (145)
230 PF03120 DNA_ligase_OB: NAD-de 35.3 20 0.00043 30.8 1.2 22 147-168 45-67 (82)
231 PF12710 HAD: haloacid dehalog 35.1 18 0.00039 36.0 1.1 16 330-345 1-16 (192)
232 COG3462 Predicted membrane pro 34.8 1.8E+02 0.0039 26.2 7.0 16 793-808 9-24 (117)
233 PRK14191 bifunctional 5,10-met 34.2 56 0.0012 35.2 4.7 45 489-533 9-63 (285)
234 PRK14189 bifunctional 5,10-met 33.9 53 0.0012 35.4 4.5 138 489-626 11-208 (285)
235 PRK14190 bifunctional 5,10-met 33.8 54 0.0012 35.3 4.5 137 489-625 11-207 (284)
236 PF15584 Imm44: Immunity prote 33.5 21 0.00046 31.0 1.1 19 154-172 13-31 (94)
237 PF13275 S4_2: S4 domain; PDB: 33.4 21 0.00046 29.2 1.0 23 138-160 35-57 (65)
238 PRK14182 bifunctional 5,10-met 32.9 67 0.0014 34.6 5.0 45 489-533 9-62 (282)
239 PRK04980 hypothetical protein; 32.9 65 0.0014 29.0 4.1 57 133-194 18-81 (102)
240 PF01455 HupF_HypC: HupF/HypC 32.5 1E+02 0.0023 25.4 5.0 32 133-164 16-50 (68)
241 PRK14178 bifunctional 5,10-met 32.2 1.4E+02 0.0031 32.1 7.3 64 563-626 129-202 (279)
242 COG5547 Small integral membran 31.9 2.3E+02 0.005 22.5 6.2 49 65-121 3-53 (62)
243 PRK14166 bifunctional 5,10-met 30.4 80 0.0017 34.0 5.1 138 489-626 9-207 (282)
244 PRK14172 bifunctional 5,10-met 29.0 78 0.0017 34.0 4.7 138 489-626 10-208 (278)
245 COG1188 Ribosome-associated he 28.4 68 0.0015 28.6 3.4 31 135-166 33-63 (100)
246 cd04728 ThiG Thiazole synthase 28.1 4.3E+02 0.0093 27.9 9.6 51 478-528 90-143 (248)
247 PRK14186 bifunctional 5,10-met 27.5 83 0.0018 34.2 4.6 137 489-625 10-207 (297)
248 PRK11033 zntA zinc/cadmium/mer 27.5 2.5E+02 0.0055 34.9 9.5 73 107-189 213-286 (741)
249 PRK14176 bifunctional 5,10-met 27.1 77 0.0017 34.2 4.3 46 488-533 15-70 (287)
250 TIGR01459 HAD-SF-IIA-hyp4 HAD- 27.0 46 0.001 34.9 2.6 91 494-606 140-236 (242)
251 PRK00208 thiG thiazole synthas 26.7 4.8E+02 0.01 27.5 9.7 51 478-528 90-143 (250)
252 PF00122 E1-E2_ATPase: E1-E2 A 26.4 7E+02 0.015 25.4 12.4 60 107-175 3-62 (230)
253 cd05017 SIS_PGI_PMI_1 The memb 26.4 85 0.0018 28.8 4.0 36 494-531 56-91 (119)
254 PRK14185 bifunctional 5,10-met 26.4 96 0.0021 33.6 4.8 45 489-533 9-63 (293)
255 cd04724 Tryptophan_synthase_al 25.7 1.9E+02 0.0042 30.3 7.0 37 495-531 116-155 (242)
256 PF02699 YajC: Preprotein tran 25.0 94 0.002 26.7 3.6 13 151-163 36-48 (82)
257 COG0279 GmhA Phosphoheptose is 24.9 1.5E+02 0.0032 29.2 5.2 54 442-519 94-147 (176)
258 PRK14180 bifunctional 5,10-met 24.9 1.1E+02 0.0024 33.0 4.9 45 489-533 9-63 (282)
259 cd00860 ThrRS_anticodon ThrRS 24.7 1.2E+02 0.0025 25.9 4.4 46 487-532 7-53 (91)
260 TIGR01460 HAD-SF-IIA Haloacid 24.5 76 0.0017 33.2 3.7 47 485-531 7-57 (236)
261 PF02606 LpxK: Tetraacyldisacc 24.4 1.2E+02 0.0025 33.6 5.2 58 574-631 55-140 (326)
262 PF13242 Hydrolase_like: HAD-h 24.2 1.6E+02 0.0035 24.4 4.9 49 576-624 13-69 (75)
263 PRK05886 yajC preprotein trans 23.9 1.7E+02 0.0037 26.7 5.2 48 99-163 3-50 (109)
264 TIGR00739 yajC preprotein tran 23.9 1.4E+02 0.0031 25.8 4.5 23 117-139 23-45 (84)
265 TIGR01501 MthylAspMutase methy 23.7 1.1E+02 0.0024 29.1 4.1 80 453-532 24-112 (134)
266 PRK05585 yajC preprotein trans 23.7 4.8E+02 0.011 23.6 8.1 29 112-140 33-61 (106)
267 TIGR00739 yajC preprotein tran 23.5 4.3E+02 0.0094 22.8 7.4 37 110-163 13-49 (84)
268 PRK14183 bifunctional 5,10-met 23.4 1.1E+02 0.0024 32.9 4.6 45 489-533 9-63 (281)
269 TIGR00288 conserved hypothetic 23.3 7.2E+02 0.016 24.4 11.4 94 447-592 43-137 (160)
270 COG0078 ArgF Ornithine carbamo 23.3 7.7E+02 0.017 26.9 10.7 83 496-609 91-180 (310)
271 PRK14193 bifunctional 5,10-met 23.3 1.2E+02 0.0027 32.7 4.9 45 489-533 11-64 (284)
272 COG1862 YajC Preprotein transl 23.1 1.6E+02 0.0036 26.2 4.8 47 100-163 9-55 (97)
273 PF11694 DUF3290: Protein of u 23.0 3.2E+02 0.0069 26.5 7.2 21 143-163 97-117 (149)
274 cd02071 MM_CoA_mut_B12_BD meth 23.0 1.3E+02 0.0027 27.9 4.4 80 452-532 21-104 (122)
275 PF05568 ASFV_J13L: African sw 22.9 1.2E+02 0.0027 28.5 4.1 34 115-148 50-83 (189)
276 PF05297 Herpes_LMP1: Herpesvi 22.8 28 0.00061 36.6 0.0 18 719-736 26-43 (381)
277 cd02433 Nodulin-21_like_2 Nodu 22.7 2.6E+02 0.0057 29.3 7.1 27 24-52 101-127 (234)
278 PRK14171 bifunctional 5,10-met 22.7 1.2E+02 0.0026 32.7 4.7 138 489-626 10-209 (288)
279 TIGR00381 cdhD CO dehydrogenas 22.5 2.5E+02 0.0055 31.5 7.2 77 564-649 219-297 (389)
280 PRK01906 tetraacyldisaccharide 22.4 1.6E+02 0.0035 32.7 5.8 58 574-631 76-161 (338)
281 PF13404 HTH_AsnC-type: AsnC-t 22.3 1.2E+02 0.0026 22.3 3.3 40 1-48 1-40 (42)
282 PF06738 DUF1212: Protein of u 22.2 4.4E+02 0.0095 26.3 8.6 15 34-48 79-93 (193)
283 cd06167 LabA_like LabA_like pr 22.0 2.7E+02 0.006 26.3 6.8 28 574-601 113-140 (149)
284 PRK10792 bifunctional 5,10-met 21.8 1.2E+02 0.0025 32.9 4.4 44 489-532 11-64 (285)
285 PF03453 MoeA_N: MoeA N-termin 21.8 1.1E+02 0.0024 30.0 3.9 58 148-211 80-142 (162)
286 PF09926 DUF2158: Uncharacteri 21.8 59 0.0013 25.5 1.6 12 153-164 2-13 (53)
287 COG2179 Predicted hydrolase of 21.5 2E+02 0.0043 28.4 5.4 81 446-532 50-133 (175)
288 KOG3085 Predicted hydrolase (H 21.4 1.9E+02 0.0041 30.4 5.7 104 495-620 116-223 (237)
289 PLN02897 tetrahydrofolate dehy 21.0 1.5E+02 0.0032 32.9 5.0 46 488-533 63-118 (345)
290 PF08006 DUF1700: Protein of u 20.7 3.7E+02 0.0081 26.7 7.6 12 44-55 59-70 (181)
291 PRK14177 bifunctional 5,10-met 20.5 1.5E+02 0.0032 32.0 4.9 45 489-533 11-65 (284)
292 PRK14187 bifunctional 5,10-met 20.3 1.6E+02 0.0035 31.9 5.1 45 489-533 10-64 (294)
293 TIGR00967 3a0501s007 preprotei 20.2 6E+02 0.013 29.1 10.0 90 35-125 314-407 (410)
294 cd05014 SIS_Kpsf KpsF-like pro 20.1 83 0.0018 29.0 2.6 26 494-519 60-85 (128)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-147 Score=1236.49 Aligned_cols=830 Identities=28% Similarity=0.402 Sum_probs=677.4
Q ss_pred cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCC
Q 002832 16 VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGK 93 (875)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~ 93 (875)
.+.|..+.+|+++.|.++ ++|||++|+.+|+++||+|+++... .+.|+++++||.|++..+|+++|++|+++.
T Consensus 2 ~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~----- 76 (972)
T KOG0202|consen 2 EEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA----- 76 (972)
T ss_pred cchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH-----
Confidence 356778999999999999 6799999999999999999998654 789999999999999999999999999995
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEE
Q 002832 94 PPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLL 173 (875)
Q Consensus 94 ~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll 173 (875)
.|.++..|.+++++|+.++++||||++|++++|+++.|+.++|+|+|+.+.++++||||||||.|+-||+||||.||+
T Consensus 77 --~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~ 154 (972)
T KOG0202|consen 77 --DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLI 154 (972)
T ss_pred --hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEE
Confidence 778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCeeeeccccCCCCeeeecCC--------------CCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCC
Q 002832 174 EGDPLKIDQSALTGESLPVTKGP--------------GDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQG 238 (875)
Q Consensus 174 ~g~~l~VdeS~LTGEs~pv~K~~--------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~ 238 (875)
+..++.+|||.|||||.|+.|+. .|++|+||.|..|+++|+|+.||.+|++|++...++.. ++++
T Consensus 155 e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kT 234 (972)
T KOG0202|consen 155 EAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKT 234 (972)
T ss_pred eeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCC
Confidence 99999999999999999999953 25799999999999999999999999999999999887 6699
Q ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHH-Hhhhc---c-c---CCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 002832 239 HFQKVLTAIGNFCICSIA-VGMIVEII-VMYPI---Q-H---RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS 309 (875)
Q Consensus 239 ~~~~~~~~i~~~~~~~~~-~~~~~~~~-~~~~~---~-~---~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~ 309 (875)
|+|+.++.+++.+.-.+. +.+.+..+ +.++. . + ..+.+.+...+++.+++||+|||+++++++++|.+||+
T Consensus 235 PLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMa 314 (972)
T KOG0202|consen 235 PLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMA 314 (972)
T ss_pred cHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHH
Confidence 999999999887642222 22222111 11111 1 2 34455667778999999999999999999999999999
Q ss_pred hcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEecc-----------CCC------------------Ch-
Q 002832 310 LQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFA-----------KGV------------------DA- 359 (875)
Q Consensus 310 ~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~-----------~~~------------------~~- 359 (875)
|++++||+++++|+||.+++||+|||||||+|+|++.+.++.... .++ ..
T Consensus 315 kknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~ 394 (972)
T KOG0202|consen 315 KKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDND 394 (972)
T ss_pred hhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccH
Confidence 999999999999999999999999999999999999987752110 000 01
Q ss_pred --HHHHHHHHHhccc------c-----ccChHHHHHHHhcC-----ChH---H-----------HhhcccEEEEecCCCC
Q 002832 360 --DAVVLMAARASRV------E-----NQDAIDAAIVGMLA-----DPK---E-----------ARANIQEVHFLPFNPT 407 (875)
Q Consensus 360 --~~~l~~~~~~~~~------~-----~~~~~~~ai~~~~~-----~~~---~-----------~~~~~~~l~~~pf~~~ 407 (875)
.+++.+++.|+.. . .+.|.|.|+...+. +.. . ....++.+.++||+++
T Consensus 395 ~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssd 474 (972)
T KOG0202|consen 395 LLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSD 474 (972)
T ss_pred HHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccc
Confidence 1234444444421 1 45788888865431 100 0 1223456699999999
Q ss_pred CceEEEEEEcCCCe--EEEEEcCcHHHHHHhccC------------ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCC-
Q 002832 408 DKRTALTYIDSEGK--MHRVSKGAPEQILNLVRN------------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDG- 472 (875)
Q Consensus 408 ~k~~sv~~~~~~g~--~~~~~KGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~- 472 (875)
+|+|++.+.+..++ +..|+|||+|.++++|+. ++..++.+.+...+++++|+|||++|+++.+..
T Consensus 475 rK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~ 554 (972)
T KOG0202|consen 475 RKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQV 554 (972)
T ss_pred cceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccC
Confidence 99999999866554 788999999999999953 245688899999999999999999999976631
Q ss_pred ----------CcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--CCcc
Q 002832 473 ----------RKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSA 540 (875)
Q Consensus 473 ----------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~ 540 (875)
.+...|.||+|+|++++.||||+|++++|+.|+++||+|+||||||.+||.+||+++|+..+.. ....
T Consensus 555 ~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~ 634 (972)
T KOG0202|consen 555 PDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMA 634 (972)
T ss_pred hhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccc
Confidence 1345789999999999999999999999999999999999999999999999999999975433 4578
Q ss_pred cccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-CccHHHhhc
Q 002832 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSA 619 (875)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~gtd~ak~a 619 (875)
++|++.|+ ++++++++...++.+|||++|+||.+||++||++|++|||||||+||+||||.|||||||| +|||+||||
T Consensus 635 ~TG~efD~-ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeA 713 (972)
T KOG0202|consen 635 LTGSEFDD-LSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEA 713 (972)
T ss_pred cchhhhhc-CCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhh
Confidence 99999985 9999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred cCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCcCHHHHHHHHHhhccc-cccccCC
Q 002832 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-LALIWKFDFPPFMVLIIAILNDGT-IMTISKD 697 (875)
Q Consensus 620 ADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~ 697 (875)
||+||.||||++|+.||+|||.+|+|||+|+.|++++|++.+..+++ ..+.++.|++|+|+||+|+++|++ +++|+++
T Consensus 714 sDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~e 793 (972)
T KOG0202|consen 714 SDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFE 793 (972)
T ss_pred hhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCC
Confidence 99999999999999999999999999999999999999996665544 556778899999999999999998 5999999
Q ss_pred CCC------CCCCCCchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCc------cccc--ccCCccchhhHH-hH
Q 002832 698 RVK------PSPLPDSWK-LAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPR------TFGV--SSLHEKDIDDWK-KL 761 (875)
Q Consensus 698 ~~~------~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~-~~ 761 (875)
+++ ||+.++... ...++.+++.+|.++...++..|++-+....... +|.. .+..+.+-..+. ..
T Consensus 794 p~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~ 873 (972)
T KOG0202|consen 794 PVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMC 873 (972)
T ss_pred CCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccc
Confidence 863 334333333 4567888999999999888776654443210000 0000 000000000000 01
Q ss_pred HHHHHHHHHHHHHH-HHHHHhcCCCccccC---chHHHHHHHHHHHHHHHHHHHhhc--ccccccCchhhHHHHHHHHHH
Q 002832 762 ASAIYLQVSTISQA-LIFVTRARSWSFVDR---PGLLLVLAFAVAQLIATLIAVYAN--WSFAAIEGVGWGWAGVVWLYN 835 (875)
Q Consensus 762 ~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 835 (875)
..++.++..++..+ +.+++|++..+.+.. .|.|+..++.+++.. .++.+|.+ ...|+..+++|.-|++++.++
T Consensus 874 ~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~-~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s 952 (972)
T KOG0202|consen 874 PLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVL-HFLVLYVPPLQRIFQTEPLSLAEWLLVLAIS 952 (972)
T ss_pred cceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHh-hheEEEechhhhhheecCCcHHHHHHHHHHh
Confidence 23555555555554 568899987775543 367777776655443 33344543 234568888888889999999
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 002832 836 LIFYIPLDFIKFFIRYALS 854 (875)
Q Consensus 836 ~~~~~~~~~~k~~~r~~~~ 854 (875)
+.+++++|++|++.|+++.
T Consensus 953 ~~V~i~dEilK~~~R~~~~ 971 (972)
T KOG0202|consen 953 SPVIIVDEILKFIARNYFK 971 (972)
T ss_pred hhhhhHHHHHHHHHHhccC
Confidence 9999999999999998864
No 2
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-145 Score=1180.32 Aligned_cols=855 Identities=85% Similarity=1.298 Sum_probs=821.4
Q ss_pred HHHhhhhccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 002832 8 MEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIAL 87 (875)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~ 87 (875)
.++.++|..+....+.||++++|..+..|||++|+++|+++||+|++++++.+.+++|+.+||||+.|++..+|++.+.+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 67788888888999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccc
Q 002832 88 ANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIP 167 (875)
Q Consensus 88 ~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vP 167 (875)
..+++.+.+|.++++|++++++|+.++|+||+++.+..++|++.+.++++|+|||+|.++++++||||||+.++.||+||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEecCCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhcccCCCCcHHHHHHHH
Q 002832 168 ADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAI 247 (875)
Q Consensus 168 aD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i 247 (875)
||+||++|+-|+||+|+|||||.|+.|++||.+|+||+|.+|++.++|++||.+|..||.++++....+..+||+.++.+
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCc
Q 002832 248 GNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGM 327 (875)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v 327 (875)
+.++++.+++.+++.+.+.|+.+.+.+...+.+.+++++..+|.++|.+++++++.|+.||+++|+++|+++++|.|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999888888888888888888888888999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCC
Q 002832 328 DVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPT 407 (875)
Q Consensus 328 ~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~ 407 (875)
|++|+|||||||.|+++|.+..++.+.++.++++++..|+.+++.++.|.+|.|+++.+.+|.+.+.+++.++++||||.
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999777778889999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEe
Q 002832 408 DKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLM 487 (875)
Q Consensus 408 ~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i 487 (875)
.||.+..+.+++|+.+.++|||||.|++.|..+.+++++.++.+++|+++|+|.+++|++..++..++.....+.|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999988888888999999999
Q ss_pred ccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
-+-||||.+..++|++....|++|.|+|||....+++.++++|+.+|.+++..+.|.+.++.+...+.++++++.+-||.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999998989999999999999999999
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHH
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~ 647 (875)
+.|+||+++|+.||++||.|+|+|||+||+||||.||+|||+..++|+|+.+||+||+++.++.|+.++..+|.+|+|++
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCcCHHHHHHHHHhhccccccccCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHH
Q 002832 648 NYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMM 727 (875)
Q Consensus 648 ~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 727 (875)
.|..|+++..+.+++.++...+.|.+.|+|.+.+++.+++|.+.|+++.|+++|++.|..|.+..+|...+++|.++++.
T Consensus 648 nytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~~ 727 (942)
T KOG0205|consen 648 NYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAIM 727 (942)
T ss_pred hheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHHH
Confidence 99999999999988888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcCCcccccccCCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccCchHHHHHHHHHHHHHHH
Q 002832 728 TVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIAT 807 (875)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~ 807 (875)
+..+||......+++..||.....++.. ...+.+|+++++..|+++|.+|++.|+|..+|+++++.+++..+++++
T Consensus 728 tvif~w~~~~t~ff~~~f~v~~~~~~~~----~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliat 803 (942)
T KOG0205|consen 728 TVIFFWAAYTTDFFPRTFGVRSLFGNEH----ELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIAT 803 (942)
T ss_pred HHHHhhhhccccccccccceeeccCCHH----HHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHH
Confidence 9999999998889988888877776665 566788999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhHHhhhh
Q 002832 808 LIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRV 866 (875)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~~~~ 866 (875)
++.+|.+|.+.....+.|.|...+|.+++..+.+.++.|+..|......+|+..++.|-
T Consensus 804 liavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~ 862 (942)
T KOG0205|consen 804 LIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKT 862 (942)
T ss_pred HHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcc
Confidence 99999999998899999999999999999999999999999998888888887666554
No 3
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.7e-135 Score=1238.96 Aligned_cols=810 Identities=27% Similarity=0.422 Sum_probs=673.4
Q ss_pred hhccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccccccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCC
Q 002832 13 KEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQE-SKILKFLGFMWNPLSWVMEAAAIMAIALANGG 91 (875)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~ 91 (875)
+.....+..+.++++++++++.+|||++||++|+++||+|+++.+++ ++|+.|+++|++|++++|+++++++++++
T Consensus 44 ~~~~~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--- 120 (902)
T PRK10517 44 ARCLKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--- 120 (902)
T ss_pred HHHHHHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc---
Confidence 34456788899999999999999999999999999999999998765 57789999999999999999999999874
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEEC------CeEEEEecCCcCCCcEEEEecCCc
Q 002832 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD------GKWMEEDAAILVPGDIISVKLGDI 165 (875)
Q Consensus 92 ~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd------g~~~~I~~~~Lv~GDiv~l~~G~~ 165 (875)
+|.++++|+++++++.+++++||+|+++++++|+++.+++++|+|| |++++|+++||||||+|.|++||+
T Consensus 121 ----~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~ 196 (902)
T PRK10517 121 ----DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDM 196 (902)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCE
Confidence 8999999999999999999999999999999999999999999999 789999999999999999999999
Q ss_pred cccceEEEecCCeeeeccccCCCCeeeecCCCC-------------ceeecceeccCceeEEEEEecchhhhhhhhhhhc
Q 002832 166 IPADARLLEGDPLKIDQSALTGESLPVTKGPGD-------------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 232 (875)
Q Consensus 166 vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~-------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~ 232 (875)
|||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||++|++|||+++++
T Consensus 197 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~ 276 (902)
T PRK10517 197 IPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVS 276 (902)
T ss_pred EeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhh
Confidence 999999999998899999999999999998864 7999999999999999999999999999999998
Q ss_pred cc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhc
Q 002832 233 ST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQ 311 (875)
Q Consensus 233 ~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~ 311 (875)
++ .+++|+|+.+++++++++.+..+.+.+.+++ +.....+|.+++...+++++++|||+||++++++++.|+++|+|+
T Consensus 277 ~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i-~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~ 355 (902)
T PRK10517 277 EQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLI-NGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQ 355 (902)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhH-HHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhC
Confidence 76 6789999999999887644333322222222 222345677888889999999999999999999999999999999
Q ss_pred CCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccc--cccChHHHHHHHhcCCh
Q 002832 312 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRV--ENQDAIDAAIVGMLADP 389 (875)
Q Consensus 312 ~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ai~~~~~~~ 389 (875)
|++||+++++|+||++|++|||||||||+|+|+|.+.. . ..+.+.++++..++.++.. ..+||+|.|++.+....
T Consensus 356 ~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~--~-~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~ 432 (902)
T PRK10517 356 KVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT--D-ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEE 432 (902)
T ss_pred CcEEecchhhhhccCCCEEEecCCCccccceEEEEEEe--c-CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999998752 1 1244556677776665443 24789999998876432
Q ss_pred --HHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHhc
Q 002832 390 --KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN----------KSEIERRVHAIIDKFAER 457 (875)
Q Consensus 390 --~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~ 457 (875)
......++.++++|||+++|+|++++...++.+..++||+||.++++|+. +++.++++.+..++++++
T Consensus 433 ~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~ 512 (902)
T PRK10517 433 SARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQ 512 (902)
T ss_pred chhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhc
Confidence 22345688899999999999999988766777789999999999999964 234456778888999999
Q ss_pred CCeEEEEEEEecCCCCc---CCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCC
Q 002832 458 GLRSLAVAYQEVPDGRK---ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTN 534 (875)
Q Consensus 458 G~rvl~~A~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~ 534 (875)
|+||+++||++++..+. ...|+|++|+|+++|+||||||++++|++||++||+|+|+||||+.||.++|+++||..
T Consensus 513 G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~- 591 (902)
T PRK10517 513 GLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA- 591 (902)
T ss_pred CCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-
Confidence 99999999998754322 12477999999999999999999999999999999999999999999999999999953
Q ss_pred CCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccH
Q 002832 535 MYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATD 614 (875)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd 614 (875)
..+++|.+++. ++++++++.+++++||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|+|
T Consensus 592 ---~~v~~G~el~~-l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtd 667 (902)
T PRK10517 592 ---GEVLIGSDIET-LSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVD 667 (902)
T ss_pred ---cCceeHHHHHh-CCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCH
Confidence 36788988874 88899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcCHHHHHHHHHhhcccccc
Q 002832 615 AARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK-FDFPPFMVLIIAILNDGTIMT 693 (875)
Q Consensus 615 ~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~ 693 (875)
+||++||+||+||||++|++++++||++|+||+|++.|.++.|+..++.++++.++++ +|++|+|++|+|+++|+++++
T Consensus 668 vAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~a 747 (902)
T PRK10517 668 IAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVA 747 (902)
T ss_pred HHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999999999998887777666666 699999999999999987899
Q ss_pred ccCCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccccccCCccchhhHHhHHHHHHHHHHH
Q 002832 694 ISKDRVKPSP--LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVST 771 (875)
Q Consensus 694 l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 (875)
+++|++++.. +|++|....+...+++.|++.++++++.|+++.+. ++.. . ... ....++.+|..++
T Consensus 748 l~~d~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~-~--~~~---~~~~~~~~F~~~~ 815 (902)
T PRK10517 748 IPFDNVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHAN-T--PET---QTLFQSGWFVVGL 815 (902)
T ss_pred hcCCCCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccc-c--hhh---HhHHHHHHHHHHH
Confidence 9999988764 67778777788888889999888877777665421 1100 0 000 0112334477777
Q ss_pred HHHH-HHHHHhcCCCccccC-chHHHHHHHHHHHHHHHHHHHhhcccccccCchh--hHHHHHHHHHHHHHHHHHHHHHH
Q 002832 772 ISQA-LIFVTRARSWSFVDR-PGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVG--WGWAGVVWLYNLIFYIPLDFIKF 847 (875)
Q Consensus 772 ~~~~-~~~~~r~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~k~ 847 (875)
++|+ .+|++|+++.+++.+ +.+..++..++.+++.+++|+.+..+++.+.+++ +..|++++.++.. ++.|+.|.
T Consensus 816 ~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~ 893 (902)
T PRK10517 816 LSQTLIVHMIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKG 893 (902)
T ss_pred HHHHHHHHhhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHH
Confidence 7775 679999987554444 4444444444444444444421112344566666 4444454444444 55677765
Q ss_pred H-HHHh
Q 002832 848 F-IRYA 852 (875)
Q Consensus 848 ~-~r~~ 852 (875)
+ .|+|
T Consensus 894 ~~~~~~ 899 (902)
T PRK10517 894 FYSRRY 899 (902)
T ss_pred HHHHhh
Confidence 4 4433
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=2e-135 Score=1253.05 Aligned_cols=825 Identities=26% Similarity=0.375 Sum_probs=668.4
Q ss_pred hccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCC
Q 002832 14 EAVDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGG 91 (875)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~ 91 (875)
|-.+||..+.+|++++|+++ .+|||++||++|+++||+|+++.++ .+.|+.|+++|++|+.++|+++++++++++
T Consensus 3 ~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--- 79 (1053)
T TIGR01523 3 EFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--- 79 (1053)
T ss_pred CCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh---
Confidence 45789999999999999998 5799999999999999999999866 678889999999999999999999999984
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceE
Q 002832 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADAR 171 (875)
Q Consensus 92 ~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ 171 (875)
+|.++++|++++++|+.++++||+|+++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+
T Consensus 80 ----~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 80 ----DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ----hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeeeeccccCCCCeeeecCCC---------------CceeecceeccCceeEEEEEecchhhhhhhhhhhcccC-
Q 002832 172 LLEGDPLKIDQSALTGESLPVTKGPG---------------DSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN- 235 (875)
Q Consensus 172 ll~g~~l~VdeS~LTGEs~pv~K~~~---------------~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~- 235 (875)
|+++++|.||||+|||||.||.|.+. |++|+||.|.+|+++++|++||++|++|||++++++..
T Consensus 156 Li~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~ 235 (1053)
T TIGR01523 156 LIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGG 235 (1053)
T ss_pred EEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhh
Confidence 99999999999999999999999642 57899999999999999999999999999999885431
Q ss_pred -----------------------------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHH
Q 002832 236 -----------------------------------QQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDN 280 (875)
Q Consensus 236 -----------------------------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (875)
.++|+|+.++++++++..+.++..++.++..+ . ..+.+.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~-~--~~~~~~~~~ 312 (1053)
T TIGR01523 236 LFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK-F--DVDKEVAIY 312 (1053)
T ss_pred ccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--hhhHHHHHH
Confidence 14899999999988754433222222222111 1 112455667
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEe---c---c
Q 002832 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI---F---A 354 (875)
Q Consensus 281 ~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~---~---~ 354 (875)
.++++++++|++||+++++++++|++||+++|++||+++++|+||++++||+|||||||+|+|+|.+++... + .
T Consensus 313 av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~ 392 (1053)
T TIGR01523 313 AICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDN 392 (1053)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecC
Confidence 789999999999999999999999999999999999999999999999999999999999999999876421 0 0
Q ss_pred --CCC---------------------------------------C---------hHHHHHHHHHhccc------------
Q 002832 355 --KGV---------------------------------------D---------ADAVVLMAARASRV------------ 372 (875)
Q Consensus 355 --~~~---------------------------------------~---------~~~~l~~~~~~~~~------------ 372 (875)
.++ + ...++..++.|+..
T Consensus 393 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~ 472 (1053)
T TIGR01523 393 SDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK 472 (1053)
T ss_pred CCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee
Confidence 000 0 01345555555421
Q ss_pred cccChHHHHHHHhcCCh----------HHH-------------------hhcccEEEEecCCCCCceEEEEEEcCCC-eE
Q 002832 373 ENQDAIDAAIVGMLADP----------KEA-------------------RANIQEVHFLPFNPTDKRTALTYIDSEG-KM 422 (875)
Q Consensus 373 ~~~~~~~~ai~~~~~~~----------~~~-------------------~~~~~~l~~~pf~~~~k~~sv~~~~~~g-~~ 422 (875)
..+||+|.|++.++... .+. +..++.++++||||++|||++++++.++ ++
T Consensus 473 ~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~ 552 (1053)
T TIGR01523 473 AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552 (1053)
T ss_pred eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEE
Confidence 12699999998764211 011 2346789999999999999999986544 47
Q ss_pred EEEEcCcHHHHHHhccC------------ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCC------------cCCCC
Q 002832 423 HRVSKGAPEQILNLVRN------------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGR------------KESSG 478 (875)
Q Consensus 423 ~~~~KGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~------------~~~~e 478 (875)
++|+|||||.|+++|+. +++.++++.+.+++|+++|+||+++|||.++..+ ++..|
T Consensus 553 ~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e 632 (1053)
T TIGR01523 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAE 632 (1053)
T ss_pred EEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhc
Confidence 88999999999999963 2345678888999999999999999999886431 13457
Q ss_pred CCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--------CCcccccccccccC
Q 002832 479 GPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--------PSSALLGQNKDESI 550 (875)
Q Consensus 479 ~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--------~~~~~~~~~~~~~~ 550 (875)
++|+|+|+++++||||||++++|++||++||+|+|+||||+.||.++|+++||..+.. ...+++|.+++. +
T Consensus 633 ~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~-l 711 (1053)
T TIGR01523 633 SDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA-L 711 (1053)
T ss_pred cCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhh-c
Confidence 8999999999999999999999999999999999999999999999999999964311 235788888874 7
Q ss_pred CcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-CccHHHhhccCEEecCCCh
Q 002832 551 VALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGL 629 (875)
Q Consensus 551 ~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~gtd~ak~aADivL~~~~~ 629 (875)
++++++++++++.||||++|+||.++|+.||++|++|+|||||+||+||||+|||||||| +|+|+||++||++|+||||
T Consensus 712 ~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred CHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCH
Confidence 788899999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCcCHHHHHHHHHhhccc-cccccCCCCCC-
Q 002832 630 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIW------KFDFPPFMVLIIAILNDGT-IMTISKDRVKP- 701 (875)
Q Consensus 630 ~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~- 701 (875)
++|+.++++||++|+||+|++.|.+++|++.++.++++.++. ++|++|+|++|+|+++|.+ ++++++|++.+
T Consensus 792 ~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~ 871 (1053)
T TIGR01523 792 ASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPD 871 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChh
Confidence 999999999999999999999999999999887766655542 3689999999999999976 69999987633
Q ss_pred -----CCCCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccccc---cCCccchhhHHhHHHHHHHHHHHH
Q 002832 702 -----SPLPD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVS---SLHEKDIDDWKKLASAIYLQVSTI 772 (875)
Q Consensus 702 -----~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 772 (875)
|+.+. +...++++.+++++|+++++.+++.|++.++. +..+..+.. ....... .. ..+++++|.++++
T Consensus 872 ~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~-~~a~t~~f~~l~~ 948 (1053)
T TIGR01523 872 LMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAHYHAGCN-DV-FKARSAAFATMTF 948 (1053)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccccccccccccccc-ch-hhhHHHHHHHHHH
Confidence 22222 23334567778899999999888777654321 000000000 0000000 01 2356777888888
Q ss_pred HHH-HHHHHhcCCCcccc------------------CchHHHHHHHHHHHHHHHHHHHhhc-c--cccccCchhhHHHHH
Q 002832 773 SQA-LIFVTRARSWSFVD------------------RPGLLLVLAFAVAQLIATLIAVYAN-W--SFAAIEGVGWGWAGV 830 (875)
Q Consensus 773 ~~~-~~~~~r~~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~ 830 (875)
+|+ ++|++|+++.+.+. ..|.+++.++++.+++. ++.+|.+ . .+|.+.|++|.| ++
T Consensus 949 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~-~~~~~~p~~~~~~f~~~~l~~~w-~~ 1026 (1053)
T TIGR01523 949 CALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSA-FPTIYIPVINDDVFKHKPIGAEW-GL 1026 (1053)
T ss_pred HHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHH-HHHHhhhhhhhhhhccCCcchHH-HH
Confidence 886 67899997655331 13566666555444333 2233322 2 256678888855 56
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Q 002832 831 VWLYNLIFYIPLDFIKFFIRYALS 854 (875)
Q Consensus 831 ~~~~~~~~~~~~~~~k~~~r~~~~ 854 (875)
++++++++++..|++|+++|++..
T Consensus 1027 ~~~~~~~~~~~~e~~K~~~r~~~~ 1050 (1053)
T TIGR01523 1027 AAAATIAFFFGAEIWKCGKRRLFK 1050 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc
Confidence 788899999999999999887643
No 5
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=5.4e-135 Score=1236.73 Aligned_cols=816 Identities=26% Similarity=0.407 Sum_probs=672.7
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCC---
Q 002832 16 VDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGG--- 91 (875)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~--- 91 (875)
...|..+.+|++++|+++.+|||++|+++|+++||+|+++.++ +++|+.|+++|++|+.++|+++++++++++...
T Consensus 25 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~ 104 (903)
T PRK15122 25 AREAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLR 104 (903)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4578899999999999998999999999999999999999766 567889999999999999999999999985321
Q ss_pred -CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEEC------CeEEEEecCCcCCCcEEEEecCC
Q 002832 92 -GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD------GKWMEEDAAILVPGDIISVKLGD 164 (875)
Q Consensus 92 -~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd------g~~~~I~~~~Lv~GDiv~l~~G~ 164 (875)
+...+|.++++|+++++++..++++||+++++++++|+++.+++++|+|| |++++|+++||||||+|.|++||
T Consensus 105 ~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd 184 (903)
T PRK15122 105 RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD 184 (903)
T ss_pred CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC
Confidence 22357999999999999999999999999999999999999999999999 48999999999999999999999
Q ss_pred ccccceEEEecCCeeeeccccCCCCeeeecCC-----------------------CCceeecceeccCceeEEEEEecch
Q 002832 165 IIPADARLLEGDPLKIDQSALTGESLPVTKGP-----------------------GDSVYSGSTCKQGEIEAVVIATGVH 221 (875)
Q Consensus 165 ~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~-----------------------~~~v~~Gt~v~~G~~~~~V~~tG~~ 221 (875)
+|||||+|++|+++.||||+|||||.|+.|.+ +|++|+||.|.+|+++++|++||++
T Consensus 185 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~ 264 (903)
T PRK15122 185 MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSR 264 (903)
T ss_pred EEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccc
Confidence 99999999999988999999999999999975 2689999999999999999999999
Q ss_pred hhhhhhhhhhcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHH
Q 002832 222 TFFGKAAHLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301 (875)
Q Consensus 222 T~~g~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~ 301 (875)
|++|||.+++++.+.++++|+.++++++++..+..+.+.+.+++ ......+|.+++...+++++++|||+||+++++++
T Consensus 265 T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~-~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~L 343 (903)
T PRK15122 265 TYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLI-NGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNL 343 (903)
T ss_pred cHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 99999999998766678999999998876543322222221111 12234567788888999999999999999999999
Q ss_pred HHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccc--cccChHH
Q 002832 302 AIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRV--ENQDAID 379 (875)
Q Consensus 302 ~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~ 379 (875)
+.|+++|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+.+ . ..+.++++++.+++.++.. ..+||+|
T Consensus 344 a~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~--~-~~~~~~~~~l~~a~l~s~~~~~~~~p~e 420 (903)
T PRK15122 344 AKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHL--D-VSGRKDERVLQLAWLNSFHQSGMKNLMD 420 (903)
T ss_pred HHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEE--c-CCCCChHHHHHHHHHhCCCCCCCCChHH
Confidence 999999999999999999999999999999999999999999998754 1 1233455667666554332 2468999
Q ss_pred HHHHHhcCChH--HHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC----------ChHHHHHH
Q 002832 380 AAIVGMLADPK--EARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN----------KSEIERRV 447 (875)
Q Consensus 380 ~ai~~~~~~~~--~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~ 447 (875)
.|++.+..+.. .....++.++++||++.+|+|++++++.+|+++.++|||||.++++|+. +++.++++
T Consensus 421 ~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i 500 (903)
T PRK15122 421 QAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERL 500 (903)
T ss_pred HHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHH
Confidence 99998764321 1234678899999999999999998876788889999999999999963 23446678
Q ss_pred HHHHHHHHhcCCeEEEEEEEecCCCCc-----CCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHH
Q 002832 448 HAIIDKFAERGLRSLAVAYQEVPDGRK-----ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIA 522 (875)
Q Consensus 448 ~~~~~~~~~~G~rvl~~A~~~~~~~~~-----~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA 522 (875)
.+..++++++|+|++++||++++..+. +..|+|++|+|+++|+||||||++++|++||++||+|+|+||||+.||
T Consensus 501 ~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA 580 (903)
T PRK15122 501 LALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVT 580 (903)
T ss_pred HHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 888899999999999999998765321 235789999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhh
Q 002832 523 KETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602 (875)
Q Consensus 523 ~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~ 602 (875)
.++|+++||.. ..+++|.+++. ++++++++.+++++||||++|+||.++|+.||++|++|||||||+||+||||+
T Consensus 581 ~aIA~~lGI~~----~~vi~G~el~~-~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ 655 (903)
T PRK15122 581 AKICREVGLEP----GEPLLGTEIEA-MDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655 (903)
T ss_pred HHHHHHcCCCC----CCccchHhhhh-CCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHh
Confidence 99999999953 35788998885 88899999999999999999999999999999999999999999999999999
Q ss_pred CCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcCHHHHH
Q 002832 603 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK-FDFPPFMVL 681 (875)
Q Consensus 603 AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~~l 681 (875)
||||||||+|||+||++||+||+||||++|+.++++||++|+||+|++.|.++.|+..++.+++..++.+ +|++|+|++
T Consensus 656 ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 735 (903)
T PRK15122 656 ADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL 735 (903)
T ss_pred CCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998776665555455 699999999
Q ss_pred HHHHhhccccccccCCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccccccCCccchhhHH
Q 002832 682 IIAILNDGTIMTISKDRVKPSP--LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWK 759 (875)
Q Consensus 682 ~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (875)
|+|+++|++++++++|++++.. +|++|..+.+-..+.++|...++++++.|++..+.. . .+ . . ...
T Consensus 736 ~~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~--~~------~-~-~~~ 803 (903)
T PRK15122 736 LQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFVF--A--AN------S-V-EMQ 803 (903)
T ss_pred HHHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--c--cC------c-H-hhh
Confidence 9999999878999999886553 555555544444555677777776666655432210 0 01 0 0 000
Q ss_pred hHHHHHHHHHHHHHHH-HHHHHhcCCCccccCch-HHHHHHHHHHHHHHHHHHHhhcccccccCchhhHHHHHHHHHHHH
Q 002832 760 KLASAIYLQVSTISQA-LIFVTRARSWSFVDRPG-LLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLI 837 (875)
Q Consensus 760 ~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (875)
...++.+|..++++|+ ++|++|+++.+++.++. +..++..++.+++.+++|+.+.-.++.+.++++..|++++.+++.
T Consensus 804 ~~~~t~~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~ 883 (903)
T PRK15122 804 ALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLG 883 (903)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 1234556777777775 68999998755555443 333333333444444444311012456778888878888888888
Q ss_pred HHHHHHHHHHHHHHh
Q 002832 838 FYIPLDFIKFFIRYA 852 (875)
Q Consensus 838 ~~~~~~~~k~~~r~~ 852 (875)
++++.|+.|.+.++.
T Consensus 884 ~~~~~e~~k~~~~r~ 898 (903)
T PRK15122 884 YCLVAQGMKRFYIRR 898 (903)
T ss_pred HHHHHHHHHHHHhhh
Confidence 888889888554433
No 6
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=8.6e-135 Score=1219.72 Aligned_cols=749 Identities=60% Similarity=0.930 Sum_probs=658.5
Q ss_pred CCCHHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHH
Q 002832 36 GLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISF 115 (875)
Q Consensus 36 GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~ 115 (875)
|||++|+++|+++||+|++++++++.|+.|+++|++|+.|+|+++++++++++ +|.+++++++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999877888999999999999999999999999984 89999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecC
Q 002832 116 IEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG 195 (875)
Q Consensus 116 ~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~ 195 (875)
+||+++++++++|+++.+++++|+|||++++|+++||||||+|.+++||+|||||+|++|+++.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999997899999999999999999
Q ss_pred CCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCc
Q 002832 196 PGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKY 274 (875)
Q Consensus 196 ~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (875)
+||.+|+||.|.+|+++++|++||++|++|||.++++++ .+++|+|+.+++++++++.+.++.+++.+++++.....+|
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 999999999999999999999999999999999999887 4678999999999988755443333333333333245678
Q ss_pred hhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEecc
Q 002832 275 RPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFA 354 (875)
Q Consensus 275 ~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~ 354 (875)
.+++...+++++++|||+||++++++++.|++||+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++ ...
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~--~~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEIL--PFF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEE--ecC
Confidence 888899999999999999999999999999999999999999999999999999999999999999999998865 222
Q ss_pred CCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEEEEEcC-CCeEEEEEcCcHHHH
Q 002832 355 KGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDS-EGKMHRVSKGAPEQI 433 (875)
Q Consensus 355 ~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~-~g~~~~~~KGa~e~i 433 (875)
.+.++++++.+++.++...++||+|.|++++..+....+..++.++.+||++.+|+|++.+.+. +|+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 2356777888887776666789999999987765444456688899999999999999988765 377888999999999
Q ss_pred HHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEE
Q 002832 434 LNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKM 513 (875)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~m 513 (875)
+++|++..+.++++++.+++++.+|+|++++||++ .|++|+|+|+++|+||||||++++|++||++||+|+|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998777777888999999999999999999983 3678999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCCCCCCC-cccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcC
Q 002832 514 ITGDQLAIAKETGRRLGMGTNMYPS-SALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (875)
Q Consensus 514 iTGD~~~tA~~ia~~lGi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GD 592 (875)
+||||+.||.++|+++||..+.... ....|++.+ .++++++++.+++++||||++|+||.++|+.||++|++|+|+||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGD 542 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRD-DLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGD 542 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchh-hCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 9999999999999999997532211 122333332 47778899999999999999999999999999999999999999
Q ss_pred CccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002832 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK 672 (875)
Q Consensus 593 G~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~ 672 (875)
|+||+||||+||||||||+|+|+||++||+||+||||++|+.++++||++|+||+||+.|.++.|+..++.++...+.++
T Consensus 543 GvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~ 622 (755)
T TIGR01647 543 GVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN 622 (755)
T ss_pred CcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998877777666677
Q ss_pred CCcCHHHHHHHHHhhccccccccCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccccccCCc
Q 002832 673 FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHE 752 (875)
Q Consensus 673 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (875)
++++|+|++|+|+++|++++++++|+++|+++|++|...+++..+++.|+++++.++++|++.+...++...++ ..
T Consensus 623 ~~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~- 698 (755)
T TIGR01647 623 FYFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFG---LQ- 698 (755)
T ss_pred cchhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccc---cc-
Confidence 88999999999999999899999999999999999999999999999999999998888877664221111111 00
Q ss_pred cchhhHHhHHHHHHHHHHHHHHH-HHHHHhcCCCccccCchHHHHHHHHHHHHHHHHHH
Q 002832 753 KDIDDWKKLASAIYLQVSTISQA-LIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIA 810 (875)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 810 (875)
.. + ...++++|..++++|. .+|++|+++.+|+++|++++.++.++.+++.++++
T Consensus 699 ~~---~-~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ 753 (755)
T TIGR01647 699 LL---H-GNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIA 753 (755)
T ss_pred cc---H-hhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHh
Confidence 00 1 2345666667777775 68999999999999999999999888777766654
No 7
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.4e-133 Score=1223.61 Aligned_cols=808 Identities=26% Similarity=0.396 Sum_probs=666.6
Q ss_pred hccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCC
Q 002832 14 EAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGGG 92 (875)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~ 92 (875)
.....|..+.++++++|+++.+|||++|+++|+++||+|+++.++ .+.|+.|+++|++|++++|+++++++++.+
T Consensus 11 ~~~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~---- 86 (867)
T TIGR01524 11 NLLKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD---- 86 (867)
T ss_pred HHHHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh----
Confidence 345578899999999999998999999999999999999998876 467889999999999999999999999874
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEE------CCeEEEEecCCcCCCcEEEEecCCcc
Q 002832 93 KPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLR------DGKWMEEDAAILVPGDIISVKLGDII 166 (875)
Q Consensus 93 ~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r------dg~~~~I~~~~Lv~GDiv~l~~G~~v 166 (875)
+|.++++|+++++++..++++||+|+++++++|+++.+++++|+| ||++++|+++||||||+|.+++||+|
T Consensus 87 ---~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~V 163 (867)
T TIGR01524 87 ---DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDII 163 (867)
T ss_pred ---hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEE
Confidence 899999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred ccceEEEecCCeeeeccccCCCCeeeecCCCC-------------ceeecceeccCceeEEEEEecchhhhhhhhhhhcc
Q 002832 167 PADARLLEGDPLKIDQSALTGESLPVTKGPGD-------------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS 233 (875)
Q Consensus 167 PaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~-------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 233 (875)
||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|++||+.+++++
T Consensus 164 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~ 243 (867)
T TIGR01524 164 PADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE 243 (867)
T ss_pred cccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC
Confidence 99999999998899999999999999998864 69999999999999999999999999999999988
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCC
Q 002832 234 TNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGA 313 (875)
Q Consensus 234 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~i 313 (875)
.++++|+|+.++++++++..+.++.+++.+++ +.....+|.+++..++++++++|||+||++++++++.|++||+|+|+
T Consensus 244 ~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~i 322 (867)
T TIGR01524 244 RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMI-NGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKV 322 (867)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHheeh-HHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCc
Confidence 66679999999999887654433332222222 22234567778888999999999999999999999999999999999
Q ss_pred ccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccc--cccChHHHHHHHhcCCh--
Q 002832 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRV--ENQDAIDAAIVGMLADP-- 389 (875)
Q Consensus 314 lvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ai~~~~~~~-- 389 (875)
++|+++++|+||++|++|||||||||+|+|+|.+.. . ..+.+.++++.+++.++.. ..+||+|.|++.++.+.
T Consensus 323 lvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~--~-~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~ 399 (867)
T TIGR01524 323 IVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI--D-SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAA 399 (867)
T ss_pred EEccchhhhhccCccEEEecCCCccccCeEEEEEEe--c-CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhch
Confidence 999999999999999999999999999999998753 1 2244556677766654432 23699999998876432
Q ss_pred HHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHhcCC
Q 002832 390 KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN----------KSEIERRVHAIIDKFAERGL 459 (875)
Q Consensus 390 ~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~ 459 (875)
...+..++.++++||||++|+|++++.+.++.++.++||+||.++++|++ +++.++++.+.+++++++|+
T Consensus 400 ~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~ 479 (867)
T TIGR01524 400 RQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGI 479 (867)
T ss_pred hhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCC
Confidence 22345678899999999999999988766666788999999999999964 23446678888999999999
Q ss_pred eEEEEEEEecCCCCc---CCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC
Q 002832 460 RSLAVAYQEVPDGRK---ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY 536 (875)
Q Consensus 460 rvl~~A~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~ 536 (875)
|++++||++++..+. +..|++|+|+|+++|+||||||++++|++||++||+|+|+||||+.||.++|+++||..
T Consensus 480 rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--- 556 (867)
T TIGR01524 480 RVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--- 556 (867)
T ss_pred EEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC---
Confidence 999999998765432 12478999999999999999999999999999999999999999999999999999963
Q ss_pred CCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHH
Q 002832 537 PSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAA 616 (875)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~a 616 (875)
..+++|.+++. ++++++++.+++++||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|+|+|
T Consensus 557 -~~v~~g~~l~~-~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvA 634 (867)
T TIGR01524 557 -NDFLLGADIEE-LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIA 634 (867)
T ss_pred -CCeeecHhhhh-CCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHH
Confidence 35788888774 7888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcCHHHHHHHHHhhcccccccc
Q 002832 617 RSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK-FDFPPFMVLIIAILNDGTIMTIS 695 (875)
Q Consensus 617 k~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~l~ 695 (875)
|++||+||+||||++|+.++++||++|+||+|++.|.++.|+..++.++++.++++ +|++|+|++|+|+++|+++++++
T Consensus 635 k~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~ 714 (867)
T TIGR01524 635 KEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLP 714 (867)
T ss_pred HHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999998877766655555 79999999999999997789999
Q ss_pred CCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccccccCCccchhhHHhHHHHHHHHHHHHH
Q 002832 696 KDRVKPSP--LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTIS 773 (875)
Q Consensus 696 ~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 773 (875)
+|++++.. +|++|..+.+...+++.|++.++.+++.|++.+.... .. +... ....++.+|..++++
T Consensus 715 ~~~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~---~~~~---~~~~~t~~f~~~~~~ 782 (867)
T TIGR01524 715 WDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFS------AN---TVEE---QALFQSGWFVVGLLS 782 (867)
T ss_pred CCCCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc------cc---chhh---hhHHHHHHHHHHHHH
Confidence 99987653 5555666667777888898887777766655432110 00 0000 012345567777777
Q ss_pred HH-HHHHHhcCCCccccCchHHHHH-HHHHHHHHHHHHHHhhcccccccCch--hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 774 QA-LIFVTRARSWSFVDRPGLLLVL-AFAVAQLIATLIAVYANWSFAAIEGV--GWGWAGVVWLYNLIFYIPLDFIKFFI 849 (875)
Q Consensus 774 ~~-~~~~~r~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~k~~~ 849 (875)
|+ ++|++|+++.+++.++..+..+ +.++.+++.+++|+.+.-.++.+.++ +|..|++++.+++. ++.|+.|.+.
T Consensus 783 ~~~~~~~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~ 860 (867)
T TIGR01524 783 QTLVVHMIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFY 860 (867)
T ss_pred HHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 75 6899999875555554333333 33333344444443210123445544 33334444444443 5678888654
Q ss_pred HH
Q 002832 850 RY 851 (875)
Q Consensus 850 r~ 851 (875)
.+
T Consensus 861 ~~ 862 (867)
T TIGR01524 861 IR 862 (867)
T ss_pred HH
Confidence 43
No 8
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-134 Score=1229.54 Aligned_cols=806 Identities=32% Similarity=0.476 Sum_probs=660.0
Q ss_pred hccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHh
Q 002832 14 EAVDLENVPME--EVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALAN 89 (875)
Q Consensus 14 ~~~~~~~~~~~--~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~ 89 (875)
...+||..+.+ ++...+.++ .+||+++|+.+|+++||+|+++..+ .+.|..|+++|++|+.++|+++++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~- 97 (917)
T COG0474 19 TSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG- 97 (917)
T ss_pred CcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 34578898888 999999887 6799999999999999999999655 678899999999999999999999999985
Q ss_pred CCCCCCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCc
Q 002832 90 GGGKPPDW----QDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDI 165 (875)
Q Consensus 90 ~~~~~~~~----~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~ 165 (875)
.| .++..|..++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||++++||+
T Consensus 98 ------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~ 171 (917)
T COG0474 98 ------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDV 171 (917)
T ss_pred ------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCc
Confidence 55 55668888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEEecCCeeeeccccCCCCeeeecCC--------------CCceeecceeccCceeEEEEEecchhhhhhhhhhh
Q 002832 166 IPADARLLEGDPLKIDQSALTGESLPVTKGP--------------GDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231 (875)
Q Consensus 166 vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~--------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~ 231 (875)
||||++|+++++++||||+|||||.|+.|.+ .|++|+||.+.+|++.++|++||++|++|+++.++
T Consensus 172 vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~ 251 (917)
T COG0474 172 VPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLL 251 (917)
T ss_pred cccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhh
Confidence 9999999999999999999999999999963 47899999999999999999999999999999999
Q ss_pred ccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHh
Q 002832 232 DST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSL 310 (875)
Q Consensus 232 ~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~ 310 (875)
... ...+|+|+.+++++++++.+.++..++.++..+......|.+.+..+++++++++|++||+.++++++.|+++|++
T Consensus 252 ~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 252 PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 988 7899999999999888655444433333333322223347889999999999999999999999999999999999
Q ss_pred cCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCC---------hHHHHHHHHHhccc--c------
Q 002832 311 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVD---------ADAVVLMAARASRV--E------ 373 (875)
Q Consensus 311 ~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~---------~~~~l~~~~~~~~~--~------ 373 (875)
+++++|+++++|+||++|+||+|||||||+|+|+|.+++........+ ...++..++.|+.. .
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~ 411 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQ 411 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCcee
Confidence 999999999999999999999999999999999999987542011111 11245555566532 2
Q ss_pred ccChHHHHHHHhcC------ChHHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC-------C
Q 002832 374 NQDAIDAAIVGMLA------DPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN-------K 440 (875)
Q Consensus 374 ~~~~~~~ai~~~~~------~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~-------~ 440 (875)
.+||.|.|+++... +....+..+++++++||||+||||++++++.+|+++.++|||||.|+++|+. .
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 46999999998764 3344556678899999999999999999977777999999999999999984 4
Q ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc----CCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcC
Q 002832 441 SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK----ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITG 516 (875)
Q Consensus 441 ~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~----~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTG 516 (875)
++.++.+.+..++|+++|+||+++|||..+..+. +..|+||+|+|+++|+||||+|++++|+.|++|||++||+||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 5678899999999999999999999998765543 578999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccC
Q 002832 517 DQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVND 596 (875)
Q Consensus 517 D~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~ND 596 (875)
||+.||++||++||+..+.....+++|.+++. ++++++.+.+++++||||+||+||.++|++||++|++|+|||||+||
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~-l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELDA-LSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhhh-cCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 99999999999999976533245889999885 77889999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCceEEec-CccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-C
Q 002832 597 APALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IWK-F 673 (875)
Q Consensus 597 apALk~AdVGIamg-~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~~-~ 673 (875)
|||||+|||||||| +|+|+||+||||+++||||++|+.+|++||++|.|++|++.|.+++|+..++.++++.+ .++ +
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999998 89999999999999999999999999999999999999999999999997666655544 344 6
Q ss_pred CcCHHHHHHHHHhhccc-cccccCCC-----C-CCCCCCCc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcc
Q 002832 674 DFPPFMVLIIAILNDGT-IMTISKDR-----V-KPSPLPDS--WKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRT 744 (875)
Q Consensus 674 ~~~~~~~l~~~~~~~~~-~~~l~~~~-----~-~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 744 (875)
|++|+|++|+|+++|.+ +++++.++ + +|+++|.. |..+.++.+.+..|...++..++.|.+....... ..
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~-~~ 809 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIA-NT 809 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc
Confidence 89999999999999997 57777664 2 33345554 4434444446677777777777776666532110 00
Q ss_pred cccccCCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccC---chHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 002832 745 FGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDR---PGLLLVLAFAVAQLIATLIAVYAN--WSFAA 819 (875)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 819 (875)
.+. .. ......++.|+.+++..+++.+.+|+.+.+|++. +++.++.+++...++...+.+.+. ...+.
T Consensus 810 ~~~-----~~--~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~ 882 (917)
T COG0474 810 LGL-----DL--FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQ 882 (917)
T ss_pred cch-----hh--HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhcc
Confidence 000 00 0112344444444444445789999987776554 455555555544433333322222 12345
Q ss_pred cCchhhHHHHHHHHHH
Q 002832 820 IEGVGWGWAGVVWLYN 835 (875)
Q Consensus 820 ~~~~~~~~~~~~~~~~ 835 (875)
..++++..|+.+..++
T Consensus 883 ~~~~~~~~~~~~~~~~ 898 (917)
T COG0474 883 PTPLSLFEWLIAIAVA 898 (917)
T ss_pred CCCCcHHHHHHHHHHH
Confidence 5555544444444444
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=4.2e-129 Score=1201.30 Aligned_cols=837 Identities=22% Similarity=0.353 Sum_probs=674.1
Q ss_pred hccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCC
Q 002832 14 EAVDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGG 91 (875)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~ 91 (875)
...+||..+.+|+++.|+++ .+|||++||++|+++||+|++++++ .+.|+.|+++|++|++++|+++++++++.....
T Consensus 13 ~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 13 VEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred ccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 33689999999999999998 6699999999999999999998755 567889999999999999999999988764211
Q ss_pred ------CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCc
Q 002832 92 ------GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDI 165 (875)
Q Consensus 92 ------~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~ 165 (875)
....+|.+++++++++++++.++++||+|+++.+++++++.+++++|+|||++++|+++||||||+|.|++||+
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~ 172 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDR 172 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCE
Confidence 12247889998889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEEecCCeeeeccccCCCCeeeecCCCC----------ceeecceeccCceeEEEEEecchhhhhhhhhhhccc-
Q 002832 166 IPADARLLEGDPLKIDQSALTGESLPVTKGPGD----------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (875)
Q Consensus 166 vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~----------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~- 234 (875)
|||||++++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|.+||+.+++++.
T Consensus 173 IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 252 (997)
T TIGR01106 173 IPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLE 252 (997)
T ss_pred EeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcc
Confidence 999999999988899999999999999998763 799999999999999999999999999999988776
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCc
Q 002832 235 NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (875)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~il 314 (875)
.+++|+++.++++.+++..+.++..++.+++ +...+..|.+.+..++++++++|||+||++++++++.++++|+++|++
T Consensus 253 ~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~il 331 (997)
T TIGR01106 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFFIL-SLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCL 331 (997)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcE
Confidence 5679999999999887544333222222222 223345677788888899999999999999999999999999999999
Q ss_pred cccchhhhhccCceEEEecccCccccCcccceeeeEEec--c-CC--------CC-----hHHHHHHHHHhccc------
Q 002832 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIF--A-KG--------VD-----ADAVVLMAARASRV------ 372 (875)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~--~-~~--------~~-----~~~~l~~~~~~~~~------ 372 (875)
+|+++++|+||++|++|||||||||+|+|+|.+++++.. . .+ .+ .+.++.+++.|+..
T Consensus 332 vk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~ 411 (997)
T TIGR01106 332 VKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQ 411 (997)
T ss_pred ecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeecccc
Confidence 999999999999999999999999999999998764210 0 00 11 12455556665421
Q ss_pred ---------cccChHHHHHHHhcC----ChHHHhhcccEEEEecCCCCCceEEEEEEcC---CCeEEEEEcCcHHHHHHh
Q 002832 373 ---------ENQDAIDAAIVGMLA----DPKEARANIQEVHFLPFNPTDKRTALTYIDS---EGKMHRVSKGAPEQILNL 436 (875)
Q Consensus 373 ---------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~---~g~~~~~~KGa~e~i~~~ 436 (875)
..+||.|.|+++++. +..+.+..++.++.+||+|+||||++++... ++++++++|||||.|+++
T Consensus 412 ~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~ 491 (997)
T TIGR01106 412 ENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILER 491 (997)
T ss_pred CCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHH
Confidence 135899999988753 2334566789999999999999999887532 246789999999999999
Q ss_pred ccC----------ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc--------C---CCCCCeeEEEEeccCCCCCC
Q 002832 437 VRN----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK--------E---SSGGPWQFIGLMPLFDPPRH 495 (875)
Q Consensus 437 ~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~--------~---~~e~~l~~lG~i~~~D~lr~ 495 (875)
|+. +++.++.+.+.+++++++|+||+++||+.+++++. + ..|++|+|+|+++++|||||
T Consensus 492 c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~ 571 (997)
T TIGR01106 492 CSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRA 571 (997)
T ss_pred hhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChH
Confidence 963 23557788899999999999999999998864321 1 12789999999999999999
Q ss_pred ChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC----------------------CCcccccccccccCCcc
Q 002832 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY----------------------PSSALLGQNKDESIVAL 553 (875)
Q Consensus 496 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------------------~~~~~~~~~~~~~~~~~ 553 (875)
|++++|++|+++||+++|+|||++.||.++|+++|+..+.. ...+++|.+++. ++++
T Consensus 572 ~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~ 650 (997)
T TIGR01106 572 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSE 650 (997)
T ss_pred HHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHH
Confidence 99999999999999999999999999999999999964321 124788888874 7778
Q ss_pred cHHHHhhhCc--EEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-CccHHHhhccCEEecCCChh
Q 002832 554 PVDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLS 630 (875)
Q Consensus 554 ~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~gtd~ak~aADivL~~~~~~ 630 (875)
++++.+++++ ||||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+||++||++|+||||+
T Consensus 651 el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~ 730 (997)
T TIGR01106 651 QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 730 (997)
T ss_pred HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHH
Confidence 8999988875 99999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCcCHHHHHHHHHhhccc-cccccCCCCCCC------
Q 002832 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IWKFDFPPFMVLIIAILNDGT-IMTISKDRVKPS------ 702 (875)
Q Consensus 631 ~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~------ 702 (875)
+|++++++||++|+|++|++.|.++.|+..++..+++.+ ..+.|++|+|++|+|+++|.+ ++++++|++.+.
T Consensus 731 ~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P 810 (997)
T TIGR01106 731 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCC
Confidence 999999999999999999999999999998776666544 345689999999999999986 699999876432
Q ss_pred CCCC-chhh-HHHH-HHHHHHHHHHHHHHHHHHHHHHhc-CcCCc-cccc---------ccCCccchhhH--------Hh
Q 002832 703 PLPD-SWKL-AEIF-TTGVILGGYLAMMTVIFFWAAYQT-DFFPR-TFGV---------SSLHEKDIDDW--------KK 760 (875)
Q Consensus 703 ~~~~-~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~-~~~~---------~~~~~~~~~~~--------~~ 760 (875)
+++. .... +..+ .+++..|+++++..++.|++.++. ++... .++. .+..+.....| ..
T Consensus 811 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (997)
T TIGR01106 811 RNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEF 890 (997)
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhh
Confidence 2221 1122 2333 344566888888888777655431 21110 0110 00000000000 01
Q ss_pred HHHHHHHHHHHHHHH-HHHHHhcCCCccc--cCchHHHHHHHHHHHHHHHHHHHhhc-ccccccCchhhHHHHHHHHHHH
Q 002832 761 LASAIYLQVSTISQA-LIFVTRARSWSFV--DRPGLLLVLAFAVAQLIATLIAVYAN-WSFAAIEGVGWGWAGVVWLYNL 836 (875)
Q Consensus 761 ~~~~~~~~~~~~~~~-~~~~~r~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 836 (875)
.+++++|..++++|+ +++++|+++.+++ ..+|++++.++++.+++..++.+.+. -.++.+.+++|.+|+.++++++
T Consensus 891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 970 (997)
T TIGR01106 891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSL 970 (997)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHH
Confidence 357788888888896 6799999776543 23566666655544444433322221 2355678888888899999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 002832 837 IFYIPLDFIKFFIRYA 852 (875)
Q Consensus 837 ~~~~~~~~~k~~~r~~ 852 (875)
+.+++.+++|++.|++
T Consensus 971 ~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 971 LIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999988764
No 10
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=2e-128 Score=1185.65 Aligned_cols=800 Identities=26% Similarity=0.395 Sum_probs=667.6
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHHhcCCCcccccc-ccHHHHHHHHH-HhHHHHHHHHHHHHHHHHHhCC
Q 002832 16 VDLENVPMEEVFETLRCN-KEGLS-TEAAEERLTIFGYNKLEEKQ-ESKILKFLGFM-WNPLSWVMEAAAIMAIALANGG 91 (875)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GL~-~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~l~~~~il~~~~~~~~ 91 (875)
.+||.++.++++++|+++ .+||| ++|+++|+++||+|+++.++ +++|+.|+++| ++|+.++|+++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 479999999999999998 56999 99999999999999999765 66788999999 8999999999999999884
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceE
Q 002832 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADAR 171 (875)
Q Consensus 92 ~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ 171 (875)
+|.+++++++++++++.++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.+++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 8999999988899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeeeeccccCCCCeeeecCCC--------------CceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CC
Q 002832 172 LLEGDPLKIDQSALTGESLPVTKGPG--------------DSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQ 236 (875)
Q Consensus 172 ll~g~~l~VdeS~LTGEs~pv~K~~~--------------~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~ 236 (875)
|++|+++.||||+|||||.|+.|.++ +++|+||.|.+|+++++|++||.+|++||+.++++++ .+
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 99998789999999999999999886 3799999999999999999999999999999999876 56
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccc
Q 002832 237 QGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITK 316 (875)
Q Consensus 237 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk 316 (875)
++|+|+.++++++++..+.++.+++.+++.| ..+.+|.+.+...+++++++|||+||++++++++.+++||+|+|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 8999999999988764433222222222222 234567788888999999999999999999999999999999999999
Q ss_pred cchhhhhccCceEEEecccCccccCcccceeeeEEec-c---CC--C-------------------ChHHHHHHHHHhcc
Q 002832 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIF-A---KG--V-------------------DADAVVLMAARASR 371 (875)
Q Consensus 317 ~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~-~---~~--~-------------------~~~~~l~~~~~~~~ 371 (875)
+++++|+||++|++|||||||||+|+|+|.+++.... . .+ . ...+++..++.|+.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 9999999999999999999999999999988753110 0 00 0 01234555555443
Q ss_pred c--------cccChHHHHHHHhcCCh--HHHhhcccEEEEecCCCCCceEEEEEEc-CCCeEEEEEcCcHHHHHHhccC-
Q 002832 372 V--------ENQDAIDAAIVGMLADP--KEARANIQEVHFLPFNPTDKRTALTYID-SEGKMHRVSKGAPEQILNLVRN- 439 (875)
Q Consensus 372 ~--------~~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~pf~~~~k~~sv~~~~-~~g~~~~~~KGa~e~i~~~~~~- 439 (875)
. ..+||+|.|++.++... ...+..++.++++||+|++|||+++++. .+++++.++||+||.++.+|+.
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 2 12579999998875422 2234468889999999999999998875 3567889999999999999963
Q ss_pred ----------ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCC
Q 002832 440 ----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV 509 (875)
Q Consensus 440 ----------~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI 509 (875)
+++.++++.+.+++++++|+|++++||+++ +++|+|+|+++++||+|||++++|++||++||
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 134466788888999999999999999974 46799999999999999999999999999999
Q ss_pred cEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEE
Q 002832 510 NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589 (875)
Q Consensus 510 ~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam 589 (875)
+++|+|||++.||.++|+++||... ...+++|++++. ++++++++.+++++||||++|+||.++|+.+|++|++|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~~-~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLDA-MDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhHh-CCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 9999999999999999999999754 234678888774 7888899999999999999999999999999999999999
Q ss_pred EcCCccCHHHHhhCCceEEec-CccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 590 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668 (875)
Q Consensus 590 ~GDG~NDapALk~AdVGIamg-~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~ 668 (875)
+|||+||+||||+|||||||| +|+|+|+++||++|+||||++|+.++++||++|+||+|++.|.++.|+..++.++++.
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 702 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALAT 702 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999999 7999999999999999999999999999999999999999999999998776654443
Q ss_pred -HhhcCCcCHHHHHHHHHhhccc-cccccCCCCCC------CCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 002832 669 -LIWKFDFPPFMVLIIAILNDGT-IMTISKDRVKP------SPLPDS-WKLAEIFTTGVILGGYLAMMTVIFFWAAYQTD 739 (875)
Q Consensus 669 -~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~------~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 739 (875)
+..+.|++|+|++|+|+++|.+ ++++++|++.+ |+++.. ...+.++..+++.|+++++.+++.|++.+..
T Consensus 703 ~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 781 (884)
T TIGR01522 703 LMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD- 781 (884)
T ss_pred HHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 3456799999999999999988 48999987633 222322 2334567777888988887777666544311
Q ss_pred cCCcccccccCCccchhhHHhHHHHHHHHHHHHHHH-HHHHHhcCCCcccc---CchHHHHHHHHHHHHHHHHHHHhhc-
Q 002832 740 FFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARSWSFVD---RPGLLLVLAFAVAQLIATLIAVYAN- 814 (875)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~- 814 (875)
+ ... ...++++|..++++|+ +.|++|+++.+++. ..|.+++.++++..++.. +.+|.+
T Consensus 782 ------~------~~~----~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~p~ 844 (884)
T TIGR01522 782 ------G------VIT----ARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQL-LVIYFPP 844 (884)
T ss_pred ------C------cch----hhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHH-HHHHHHH
Confidence 0 001 2346777777788885 68999997766543 235555555554433332 223321
Q ss_pred -ccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002832 815 -WSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYA 852 (875)
Q Consensus 815 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~ 852 (875)
-.++.+.|++|..|+.+++++++.+++.|++|+++|++
T Consensus 845 ~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 845 LQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 23456788889888999999999999999999988765
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1.5e-126 Score=1175.91 Aligned_cols=816 Identities=22% Similarity=0.340 Sum_probs=654.7
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHHhcCCCccccccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHHhC------C
Q 002832 22 PMEEVFETLRCN-KEGLS--TEAAEERLTIFGYNKLEEKQE-SKILKFLGFMWNPLSWVMEAAAIMAIALANG------G 91 (875)
Q Consensus 22 ~~~~~~~~l~~~-~~GL~--~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~------~ 91 (875)
+.++++++|+++ ++||| ++||++|+++||+|+++.+++ ++|+.|+++|++|++++|+++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 688999999999 56999 999999999999999998765 6678899999999999999999999987632 1
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccce
Q 002832 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMAS-LAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADA 170 (875)
Q Consensus 92 ~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~-~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~ 170 (875)
++..+|.++++++++++++..+++++|++++++.+++++. .+++++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 2234799999999999999999999999999999999864 477999999999999999999999999999999999999
Q ss_pred EEEecCCeeeeccccCCCCeeeecCCCCc--eeecceeccCceeEEEEEecchhhhhhhhhhhcccCCCCcHHHHHHHHH
Q 002832 171 RLLEGDPLKIDQSALTGESLPVTKGPGDS--VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIG 248 (875)
Q Consensus 171 ~ll~g~~l~VdeS~LTGEs~pv~K~~~~~--v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i~ 248 (875)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.|.+|+++++|++||++|++||+.++++++++++|+++.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999778999999999999999998765 9999999999999999999999999999999987766789999999988
Q ss_pred HHHHHHHHHHHHHHHHH---hhhcc---c---------CCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCC
Q 002832 249 NFCICSIAVGMIVEIIV---MYPIQ---H---------RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGA 313 (875)
Q Consensus 249 ~~~~~~~~~~~~~~~~~---~~~~~---~---------~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~i 313 (875)
+++..+.++.+++.+++ .+... . .++.+.+..++++++++|||+||++++++++.++++|+|+|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 77543222211111111 11111 1 135566778889999999999999999999999999999999
Q ss_pred ccccchhhhhccCceEEEecccCccccCcccceeeeEEec--c-CC----CC--hHHHHHHHHH-hccc-----------
Q 002832 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIF--A-KG----VD--ADAVVLMAAR-ASRV----------- 372 (875)
Q Consensus 314 lvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~--~-~~----~~--~~~~l~~~~~-~~~~----------- 372 (875)
++|+++++|+||++|++|||||||||+|+|+|.+++.... . .+ .+ ..+++..++. ++..
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 9999999999999999999999999999999988764211 0 00 01 1122333322 2221
Q ss_pred cccChHHHHHHHhcC----ChHHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCC--------
Q 002832 373 ENQDAIDAAIVGMLA----DPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK-------- 440 (875)
Q Consensus 373 ~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~-------- 440 (875)
..+||+|.|+++++. +....+..++.++.+||+|++|+|+++++..+++++.++|||||.++++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 126899999988753 22333456778889999999999999988766778899999999999999641
Q ss_pred --hHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc---CCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEc
Q 002832 441 --SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK---ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMIT 515 (875)
Q Consensus 441 --~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miT 515 (875)
++.++++.+.+++++++|+||+++||++++.++. +..|++|+|+|+++++||+|||++++|++||++||+++|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 1245678888999999999999999999864332 23478999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCcc
Q 002832 516 GDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 595 (875)
Q Consensus 516 GD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~N 595 (875)
|||+.||.++|+++||..+ ...+++|++++. +.++++++++++++||||++|+||.++|+.||++|++|+|||||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTF--GGLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCC--CceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 9999999999999999754 235788888875 7788899999999999999999999999999999999999999999
Q ss_pred CHHHHhhCCceEEec-CccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcC
Q 002832 596 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA-LIWKF 673 (875)
Q Consensus 596 DapALk~AdVGIamg-~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~-~~~~~ 673 (875)
|+||||+|||||||| +|+|+||++||++|+||||++|++++++||++|+||+|++.|.+++|+..++..+++. +..+.
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 9999999999999999999999999999999999999999999999998766655544 34567
Q ss_pred CcCHHHHHHHHHhhccc-cccccCCCCCCC------CCCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCccc
Q 002832 674 DFPPFMVLIIAILNDGT-IMTISKDRVKPS------PLPD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTF 745 (875)
Q Consensus 674 ~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~------~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 745 (875)
|++|+|++|+|+++|.+ ++++++|++.+. +++. +...+.++..++..|+++++..++++++... ++...
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~- 836 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDVS- 836 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhccc-
Confidence 99999999999999976 689998876332 2222 2233456777888899988888777665432 11100
Q ss_pred ccccCCccchhhHHhHHHHHHHHHHHHHHH-HHHHHhcCCC-ccccC--chHHHHHHHHHHHHHHHHHHHhhcccccccC
Q 002832 746 GVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARSW-SFVDR--PGLLLVLAFAVAQLIATLIAVYANWSFAAIE 821 (875)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~-~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (875)
+......... ...+++.|.+++++|+ +.+++|+.+. +++.. .|++++.++.+..++..++..+. -.++.+.
T Consensus 837 ~~~~~~~~~~----~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~-~~~f~~~ 911 (941)
T TIGR01517 837 GPDEITSHQQ----GELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFG-GSFFSTV 911 (941)
T ss_pred Cccccccccc----chhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHH-HHHhccc
Confidence 0000000001 2345666767777775 6789998653 22211 24455444443333332222222 2345678
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 822 GVGWGWAGVVWLYNLIFYIPLDFIKFF 848 (875)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~k~~ 848 (875)
|++|..|+.+++++++.+++.++.|.+
T Consensus 912 ~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 912 SLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888888889999999999999988875
No 12
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.8e-129 Score=1081.81 Aligned_cols=811 Identities=22% Similarity=0.325 Sum_probs=632.9
Q ss_pred HHHHHHHcCCC-CCCCCH--HHHHHHHHhcCCCccccccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCC-CCCCch
Q 002832 23 MEEVFETLRCN-KEGLST--EAAEERLTIFGYNKLEEKQE-SKILKFLGFMWNPLSWVMEAAAIMAIALANGG-GKPPDW 97 (875)
Q Consensus 23 ~~~~~~~l~~~-~~GL~~--~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~-~~~~~~ 97 (875)
.++++++|+++ ..||+. +|.++|++.||.|.+|++++ ++|...|+.+.+.-.++|.++|++|+.++++. +.+..|
T Consensus 103 v~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW 182 (1034)
T KOG0204|consen 103 VEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGW 182 (1034)
T ss_pred HHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCccc
Confidence 78999999999 569976 88999999999999998774 56667789999999999999999999998754 346699
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEecC
Q 002832 98 QDFVGIVTLLLINSTISFIEENNAGNAAAALM-ASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGD 176 (875)
Q Consensus 98 ~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~-~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~ 176 (875)
++++.|++.+++..+...+.+|+.++..+.|. .....+..|+|||+.++|+..|||||||+.|+.||.|||||++++|+
T Consensus 183 ~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn 262 (1034)
T KOG0204|consen 183 IEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGN 262 (1034)
T ss_pred ccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEecc
Confidence 99998876544333333333333333333333 23456789999999999999999999999999999999999999999
Q ss_pred CeeeeccccCCCCeeeecCC--CCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHH-
Q 002832 177 PLKIDQSALTGESLPVTKGP--GDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCI- 252 (875)
Q Consensus 177 ~l~VdeS~LTGEs~pv~K~~--~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~- 252 (875)
+|.+|||++||||.++.|.+ +.++++||.+.+|.++++|+++|++|+.|++..++... .+++|+|-++++++...-
T Consensus 263 ~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk 342 (1034)
T KOG0204|consen 263 SLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGK 342 (1034)
T ss_pred ceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHH
Confidence 99999999999999999987 45899999999999999999999999999999999887 589999999988765421
Q ss_pred --HHHHHHHHHHHHHhhhcc-----cC---Cch----hhHHHH----HHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCc
Q 002832 253 --CSIAVGMIVEIIVMYPIQ-----HR---KYR----PGIDNL----LVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (875)
Q Consensus 253 --~~~~~~~~~~~~~~~~~~-----~~---~~~----~~~~~~----~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~il 314 (875)
...+...++.++..|+.. .. .+. +.+..+ +.++++++|||||+++++++++++++|.+.|.+
T Consensus 343 ~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~L 422 (1034)
T KOG0204|consen 343 IGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNL 422 (1034)
T ss_pred HHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhH
Confidence 111111111122222211 01 111 112222 245678999999999999999999999999999
Q ss_pred cccchhhhhccCceEEEecccCccccCcccceeeeEEeccCC--------CChH--HHH-HHHHHhcc------------
Q 002832 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKG--------VDAD--AVV-LMAARASR------------ 371 (875)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~--------~~~~--~~l-~~~~~~~~------------ 371 (875)
||+++|+|++|+.++||+|||||||+|+|+|.+.++....+. .++. +++ ...+.++.
T Consensus 423 VRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~ 502 (1034)
T KOG0204|consen 423 VRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQ 502 (1034)
T ss_pred HHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcC
Confidence 999999999999999999999999999999998776322111 2221 111 11121110
Q ss_pred -ccccChHHHHHHHhc----CChHHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC-------
Q 002832 372 -VENQDAIDAAIVGML----ADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN------- 439 (875)
Q Consensus 372 -~~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~------- 439 (875)
...++|.|.|++++. .+.+..|.+.+.++.+||+|.+|+|+++++.++|..+.++|||+|.+++.|..
T Consensus 503 ~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~ 582 (1034)
T KOG0204|consen 503 PEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGE 582 (1034)
T ss_pred ccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCC
Confidence 113589999998763 35566677888999999999999999999977766349999999999999974
Q ss_pred ----ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCC-------C-cCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhC
Q 002832 440 ----KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDG-------R-KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNL 507 (875)
Q Consensus 440 ----~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~-------~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a 507 (875)
+++.++.+.+.++.|+.+|+|++|+||++.... + .+..+.+|+++|+++++||+|||++++|+.||+|
T Consensus 583 ~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~A 662 (1034)
T KOG0204|consen 583 LVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRA 662 (1034)
T ss_pred EeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHc
Confidence 245566889999999999999999999985332 1 1356789999999999999999999999999999
Q ss_pred CCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEE
Q 002832 508 GVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHIC 587 (875)
Q Consensus 508 GI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V 587 (875)
||+|.|+||||..||++||.+|||.++......+.|++..+ ++++++++++++.+|+||.+|.||..+|+.|+++||+|
T Consensus 663 GItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~-~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VV 741 (1034)
T KOG0204|consen 663 GITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRE-LSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVV 741 (1034)
T ss_pred CcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhh-cCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEE
Confidence 99999999999999999999999998766668899999985 89999999999999999999999999999999999999
Q ss_pred EEEcCCccCHHHHhhCCceEEec-CccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 588 GMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 666 (875)
Q Consensus 588 am~GDG~NDapALk~AdVGIamg-~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~ 666 (875)
|+||||+||+||||+||||.||| .|||+|||+|||||+||||++|+++++|||++|+||+||++|+++.|+..++..+.
T Consensus 742 AVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv 821 (1034)
T KOG0204|consen 742 AVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFV 821 (1034)
T ss_pred EEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhh
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999864444343
Q ss_pred -HHHhhcCCcCHHHHHHHHHhhccc-cccccCCCCCC-------CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002832 667 -LALIWKFDFPPFMVLIIAILNDGT-IMTISKDRVKP-------SPLPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQ 737 (875)
Q Consensus 667 -~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 737 (875)
+...-..|++++|+||.|+++|.+ ++||+.|++.+ ..|..+...+-+++..+...+|+-++.+.+.+....
T Consensus 822 ~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~ 901 (1034)
T KOG0204|consen 822 SACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKS 901 (1034)
T ss_pred hhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 434445799999999999999998 69999998733 223344445567777888888888776655443321
Q ss_pred cCcCCcccccccCCccchhhHHhHHHHHHHHHHHHHHH-HHHHHhcCC-Cc----cccCchHH-HHHHHHHHHHHHHHHH
Q 002832 738 TDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARS-WS----FVDRPGLL-LVLAFAVAQLIATLIA 810 (875)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~-~~----~~~~~~~~-l~~~~~~~~~~~~~~~ 810 (875)
.|+.+...++++ ...-++.|..++++|+ +-++.|.-. .. .++|+-+. .+...+.+++ ++.
T Consensus 902 ------if~~~~~~~~~~----~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~Qv---iIv 968 (1034)
T KOG0204|consen 902 ------IFGLNGPLHSPP----SVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQV---IIV 968 (1034)
T ss_pred ------hhccCCCCCCch----hhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhh---hhh
Confidence 122211111122 2333566677777775 457888743 11 12222111 1111112222 222
Q ss_pred HhhcccccccCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 811 VYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFF 848 (875)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 848 (875)
.++ -.++...+++|..|++++++++..++.-.+.|.+
T Consensus 969 eF~-g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 969 EFG-GAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred hhc-CcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 232 2346789999999999999998888887777754
No 13
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-124 Score=1043.74 Aligned_cols=854 Identities=23% Similarity=0.386 Sum_probs=697.2
Q ss_pred cchhHHHHhhhhc-cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHH
Q 002832 3 SKAETMEAVLKEA-VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEA 79 (875)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~ 79 (875)
+|.+.+++.++|. ++.|.+|.+|+.++++++ .+|||.+++.+++++.|+|.+++|+ .+.|.+|++|+++.+.+++++
T Consensus 23 ~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~ 102 (1019)
T KOG0203|consen 23 KKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWI 102 (1019)
T ss_pred chhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHH
Confidence 3556778889998 899999999999999999 7899999999999999999998876 567889999999999999999
Q ss_pred HHHHHHHHHhCCC-----CCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcC
Q 002832 80 AAIMAIALANGGG-----KPP-DWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILV 153 (875)
Q Consensus 80 ~~il~~~~~~~~~-----~~~-~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv 153 (875)
+++++++.+.... ++. ..+-+.++..++++.....|+||.+..+.+++++++.|+.++|+|||+...+.++|||
T Consensus 103 ~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelV 182 (1019)
T KOG0203|consen 103 GAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELV 182 (1019)
T ss_pred HHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcc
Confidence 9999998753211 111 2222333444556678889999999999999999999999999999999999999999
Q ss_pred CCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCC----------CceeecceeccCceeEEEEEecchhh
Q 002832 154 PGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG----------DSVYSGSTCKQGEIEAVVIATGVHTF 223 (875)
Q Consensus 154 ~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~----------~~v~~Gt~v~~G~~~~~V~~tG~~T~ 223 (875)
+||+|.++-||+||||.|++++.++++|+|+|||||.|..+++. |+.|.+|.+.+|.++++|++||.+|.
T Consensus 183 vGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv 262 (1019)
T KOG0203|consen 183 VGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTV 262 (1019)
T ss_pred cccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceE
Confidence 99999999999999999999999999999999999999998763 67899999999999999999999999
Q ss_pred hhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHH
Q 002832 224 FGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302 (875)
Q Consensus 224 ~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~ 302 (875)
+|+|+.+...- ..++|+++.++.+..+.....+ .+.+.++......+..|..++..++.++++.+|+|||.+++++++
T Consensus 263 ~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi-~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Lt 341 (1019)
T KOG0203|consen 263 MGRIASLASGLEDGKTPIAKEIEHFIHIITGVAI-FLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLT 341 (1019)
T ss_pred EeehhhhhccCCCCCCcchhhhhchHHHHHHHHH-HHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHH
Confidence 99999987764 7789999999888766432221 111222222222366778888888889999999999999999999
Q ss_pred HHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccC----------------CCChHHHHHHH
Q 002832 303 IGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAK----------------GVDADAVVLMA 366 (875)
Q Consensus 303 ~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~----------------~~~~~~~l~~~ 366 (875)
.-++||+++++++|++.++|+||+.++||+|||||||+|+|+|.+.|++..-. +..-.++.+++
T Consensus 342 ltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~ 421 (1019)
T KOG0203|consen 342 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIA 421 (1019)
T ss_pred HHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987642110 11223566677
Q ss_pred HHhccc---------------cccChHHHHHHHhc----CChHHHhhcccEEEEecCCCCCceEEEEEEcCC---CeEEE
Q 002832 367 ARASRV---------------ENQDAIDAAIVGML----ADPKEARANIQEVHFLPFNPTDKRTALTYIDSE---GKMHR 424 (875)
Q Consensus 367 ~~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~---g~~~~ 424 (875)
..|+.. ..+|+.+.|++++. .+..+.+..++.+.++||+|.+|+.-.++...+ .+..+
T Consensus 422 ~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l 501 (1019)
T KOG0203|consen 422 TLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLL 501 (1019)
T ss_pred HHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCcccee
Confidence 766632 14678899998864 344667888999999999999999887776433 56788
Q ss_pred EEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc-----------CCCCCCeeE
Q 002832 425 VSKGAPEQILNLVRN----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK-----------ESSGGPWQF 483 (875)
Q Consensus 425 ~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~-----------~~~e~~l~~ 483 (875)
..|||||.++++|+. ++...+.+++....+...|.||++++++.+++.+. .....+|.|
T Consensus 502 ~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~F 581 (1019)
T KOG0203|consen 502 VMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRF 581 (1019)
T ss_pred eecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccc
Confidence 899999999999984 34567888899999999999999999998875531 124567999
Q ss_pred EEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC----------------------CCccc
Q 002832 484 IGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY----------------------PSSAL 541 (875)
Q Consensus 484 lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------------------~~~~~ 541 (875)
+|++++.||||..+|+++..||.|||||+|+||||+.||+++|+++||..+.. ...++
T Consensus 582 lGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~Vi 661 (1019)
T KOG0203|consen 582 LGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVI 661 (1019)
T ss_pred cchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEE
Confidence 99999999999999999999999999999999999999999999999754211 11246
Q ss_pred ccccccccCCcccHHHHhhhCc--EEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-CccHHHhh
Q 002832 542 LGQNKDESIVALPVDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARS 618 (875)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~gtd~ak~ 618 (875)
.|.++. +++.+++++++++.. ||||+||+||+.||+.+|++|.+|+++|||+||+||||+|||||||| .|+|++|+
T Consensus 662 hG~eL~-~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKq 740 (1019)
T KOG0203|consen 662 HGSELP-DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 740 (1019)
T ss_pred eccccc-ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHh
Confidence 666665 488889999998766 99999999999999999999999999999999999999999999999 99999999
Q ss_pred ccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCcCHHHHHHHHHhhccc-cccccC
Q 002832 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA-LIWKFDFPPFMVLIIAILNDGT-IMTISK 696 (875)
Q Consensus 619 aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~-~~~l~~ 696 (875)
|||+||+||||++|+..|++||-+|+|+||.|.|.+++|++.+..++.++ +..|+|+.++++|.+.+.+|+. ++++++
T Consensus 741 AADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAY 820 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAY 820 (1019)
T ss_pred hcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhc
Confidence 99999999999999999999999999999999999999999887766544 4678899999999999999998 599999
Q ss_pred CCC------CCCCCCCc--hhhHH-HHHHHHHHHHHHHHHHHHHHHHH-HhcCcCCccc----------ccccCCccchh
Q 002832 697 DRV------KPSPLPDS--WKLAE-IFTTGVILGGYLAMMTVIFFWAA-YQTDFFPRTF----------GVSSLHEKDID 756 (875)
Q Consensus 697 ~~~------~~~~~~~~--~~~~~-~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~~ 756 (875)
|.+ ++|+.|.. ....+ +...++.+|+++++..|+.|+.. +..+|+|... +.+++.++..+
T Consensus 821 E~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQ 900 (1019)
T KOG0203|consen 821 EKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQ 900 (1019)
T ss_pred cCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccc
Confidence 875 33443332 22233 56677899999999988766544 4466666431 22344444444
Q ss_pred hHH--------hHHHHHHHHHHHHHHH-HHHHHhcCCCcc--ccCchHHHHHHHHHHHHHHHHHHHhhc-ccccccCchh
Q 002832 757 DWK--------KLASAIYLQVSTISQA-LIFVTRARSWSF--VDRPGLLLVLAFAVAQLIATLIAVYAN-WSFAAIEGVG 824 (875)
Q Consensus 757 ~~~--------~~~~~~~~~~~~~~~~-~~~~~r~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 824 (875)
.|+ ..+.+.||..++..|+ -++.+.|++-+. .+..|+.++++++.-.++.+++.+.+. ...+.+.|+.
T Consensus 901 eWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~ 980 (1019)
T KOG0203|consen 901 EWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLK 980 (1019)
T ss_pred cccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCC
Confidence 443 1245667777778886 355565655554 445788888888877666666544432 2234577888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhh
Q 002832 825 WGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDL 860 (875)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~ 860 (875)
|.||+..++++++.++++|++|++.|+| |.+|-.
T Consensus 981 ~~~wl~a~P~~ilIfvydE~Rk~~IR~~--P~gw~e 1014 (1019)
T KOG0203|consen 981 FQWWLVAFPFGILIFVYDEVRKLFIRRY--PGGWLE 1014 (1019)
T ss_pred cEEEEecccceeeeeeHHHHHhHhhhhC--CCchhh
Confidence 9999999999999999999999999987 345533
No 14
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.2e-118 Score=1099.21 Aligned_cols=783 Identities=28% Similarity=0.386 Sum_probs=621.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhCC---CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEEC
Q 002832 65 FLGFMWNPLSWVMEAAAIMAIALANGG---GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD 141 (875)
Q Consensus 65 ~~~~~~~~~~~~l~~~~il~~~~~~~~---~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd 141 (875)
+++||++|++++|+++++++++++... ....+|.++++|++++++++.++++||+|+++.+++|+++.+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 478999999999999999999986432 12248999999999999999999999999999999999999999999999
Q ss_pred CeEEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCC-------------Cceeecceecc
Q 002832 142 GKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG-------------DSVYSGSTCKQ 208 (875)
Q Consensus 142 g~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~-------------~~v~~Gt~v~~ 208 (875)
|++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ |++|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999998889999999999999999875 78999999999
Q ss_pred CceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-c----cCCch----hhH
Q 002832 209 GEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPI-Q----HRKYR----PGI 278 (875)
Q Consensus 209 G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~----~~~ 278 (875)
|+++++|++||.+|++||+.++++++ .+++|+|+.+++++.++..+.++.+++.+++.... . ..+|. ..+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999988876 66899999999998775443322222222211111 0 11222 233
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEe------
Q 002832 279 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI------ 352 (875)
Q Consensus 279 ~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~------ 352 (875)
...+++++++|||+||++++++++.+++||+++|+++|+++++|+||++|+||||||||||+|+|+|.+++...
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 34567889999999999999999999999999999999999999999999999999999999999998875321
Q ss_pred -----ccCCCC-------------------hHHHHHHHHHhccc------------cccChHHHHHHHhcCCh-------
Q 002832 353 -----FAKGVD-------------------ADAVVLMAARASRV------------ENQDAIDAAIVGMLADP------- 389 (875)
Q Consensus 353 -----~~~~~~-------------------~~~~l~~~~~~~~~------------~~~~~~~~ai~~~~~~~------- 389 (875)
.+.+++ .+.++..++.|+.. ..+||.|.|++.++.+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 000000 12344555555531 13689999998764211
Q ss_pred -------------HHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC-----------ChHHHH
Q 002832 390 -------------KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN-----------KSEIER 445 (875)
Q Consensus 390 -------------~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~-----------~~~~~~ 445 (875)
...+..++.++++||||+||||+++++. +++++.|+|||||.|+++|++ +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 0124567789999999999999999875 466889999999999999963 134567
Q ss_pred HHHHHHHHHHh-cCCeEEEEEEEecCCCC----------cCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEE
Q 002832 446 RVHAIIDKFAE-RGLRSLAVAYQEVPDGR----------KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMI 514 (875)
Q Consensus 446 ~~~~~~~~~~~-~G~rvl~~A~~~~~~~~----------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~mi 514 (875)
++.+.++++++ +|+||+++|||.+++++ .+..|++|+|+|+++++||||||++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986421 13458899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCCCCCC--CCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcC
Q 002832 515 TGDQLAIAKETGRRLGMGTNMY--PSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (875)
Q Consensus 515 TGD~~~tA~~ia~~lGi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GD 592 (875)
|||++.||.++|+++|+..+.. ....++|++++. ++++++.+...+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~-~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE-MGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh-CCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 9999999999999999975322 123567777664 6677788888889999999999999999999999999999999
Q ss_pred CccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh
Q 002832 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IW 671 (875)
Q Consensus 593 G~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~ 671 (875)
|+||+||||+||||||||+|+++||++||+++.||||++|++++++||++|+|++|++.|.+++|+..++..+++.+ .+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999997776665543 45
Q ss_pred cCCcCHHHHHHHHHhhccc-cccccCCCCCC------CCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcCC
Q 002832 672 KFDFPPFMVLIIAILNDGT-IMTISKDRVKP------SPLPDS-WKLAEIFTTGVILGGYLAMMTVIFFWAAYQT-DFFP 742 (875)
Q Consensus 672 ~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~------~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 742 (875)
+.|++|+|++|+|+++|.+ ++++++|++++ |+++.. ...++.+..+++.|+++++.+++.|++.... ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6799999999999999966 68888887633 222222 2334577788889999998877666554321 1110
Q ss_pred c--cc--ccccCCccchh--hHHhHHHHHHHHHHHHHHH-HHHHHhcCCCcccc---CchHHHHHHHHHHHHHHHHHHHh
Q 002832 743 R--TF--GVSSLHEKDID--DWKKLASAIYLQVSTISQA-LIFVTRARSWSFVD---RPGLLLVLAFAVAQLIATLIAVY 812 (875)
Q Consensus 743 ~--~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 812 (875)
. .. +..+..+.... ......++++|.+++++|+ +.|++|+++.+++. ..|.+++.++++.+++. ++..|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~-~~~~~ 877 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALH-FLILY 877 (917)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHH-HHHHH
Confidence 0 00 00000000000 0002356778888888886 67999997766443 23555555544433332 22223
Q ss_pred hc--ccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 813 AN--WSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIR 850 (875)
Q Consensus 813 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r 850 (875)
.+ -.++.+.|++|..|+++++++++++++.|++|+++|
T Consensus 878 v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 878 VPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 22 234567889999999999999999999999998764
No 15
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=3.4e-115 Score=1084.37 Aligned_cols=736 Identities=22% Similarity=0.266 Sum_probs=581.1
Q ss_pred CCCCCHHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHH
Q 002832 34 KEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTI 113 (875)
Q Consensus 34 ~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~ 113 (875)
.+|||++|+++|+++||+|+++.++++.++.|++++++||+++++++.++ |++. .+|.+++.++++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l-~~~~------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVIL-WLLD------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHH-HHhh------hhHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999888888999999999998777776555 4442 3688899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEe--cCCccccceEEEecCCeeeeccccCCCCee
Q 002832 114 SFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVK--LGDIIPADARLLEGDPLKIDQSALTGESLP 191 (875)
Q Consensus 114 ~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~--~G~~vPaD~~ll~g~~l~VdeS~LTGEs~p 191 (875)
+++|++|+.+.++++.. .+++++|+|||++++|+++||||||+|.|+ +||+|||||+|++|+ +.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCCccc
Confidence 99999999998887643 567899999999999999999999999999 999999999999997 68999999999999
Q ss_pred eecCCC------------------Cceeecceecc-------CceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHH
Q 002832 192 VTKGPG------------------DSVYSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLT 245 (875)
Q Consensus 192 v~K~~~------------------~~v~~Gt~v~~-------G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~ 245 (875)
+.|.+. +++|+||.|.+ |.++++|++||.+|..|++.+.+..+ +..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 35999999985 78999999999999999999988766 55688888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhcc
Q 002832 246 AIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMA 325 (875)
Q Consensus 246 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg 325 (875)
++..+++.+.+++++. .+......+.++.+.+..++.++++++|++||+++++++++|++||+|+|++||+++++|++|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 7765543322222221 122222234577888899999999999999999999999999999999999999999999999
Q ss_pred CceEEEecccCccccCcccceeeeEEeccCC----------CChHHHHHHHHHhccc------cccChHHHHHHHhcCCh
Q 002832 326 GMDVLCSDKTGTLTLNKLSVDKNLIEIFAKG----------VDADAVVLMAARASRV------ENQDAIDAAIVGMLADP 389 (875)
Q Consensus 326 ~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~----------~~~~~~l~~~~~~~~~------~~~~~~~~ai~~~~~~~ 389 (875)
++|++|||||||||+|+|+|.+++....... .....+....+.|+.. ..+||+|.|+.++.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999988653211000 1112233334444321 24799999999875311
Q ss_pred HHH-------------------hhcccEEEEecCCCCCceEEEEEEcC-CCeEEEEEcCcHHHHHHhccCChHHHHHHHH
Q 002832 390 KEA-------------------RANIQEVHFLPFNPTDKRTALTYIDS-EGKMHRVSKGAPEQILNLVRNKSEIERRVHA 449 (875)
Q Consensus 390 ~~~-------------------~~~~~~l~~~pf~~~~k~~sv~~~~~-~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~ 449 (875)
.+. ...++.++.+||+|++|||+++++.. +++++.++|||||.|+++|... ..++++++
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-TVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-CCChhHHH
Confidence 000 13577889999999999999999864 3567899999999999999853 35678889
Q ss_pred HHHHHHhcCCeEEEEEEEecCCC--------CcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHH
Q 002832 450 IIDKFAERGLRSLAVAYQEVPDG--------RKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (875)
Q Consensus 450 ~~~~~~~~G~rvl~~A~~~~~~~--------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t 521 (875)
.+++++++|+||+|+|||++++. ++++.|+||+|+|+++|+||+|||++++|++||++||+++|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998642 2355789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC---------------------------------------------------Ccccccccccc--
Q 002832 522 AKETGRRLGMGTNMYP---------------------------------------------------SSALLGQNKDE-- 548 (875)
Q Consensus 522 A~~ia~~lGi~~~~~~---------------------------------------------------~~~~~~~~~~~-- 548 (875)
|.++|+++||..+... ..+++|++++.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 01233333221
Q ss_pred cCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCC
Q 002832 549 SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (875)
Q Consensus 549 ~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~ 628 (875)
.+.++++++++++++||||++|+||.++|+.||+.|++|+|||||+|||||||+||||||||++ |++ .|||+++.+||
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 1233467788889999999999999999999999999999999999999999999999999965 555 79999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcCHHHHHHHHHhhccc-cccccCCCCCCC---CC
Q 002832 629 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGT-IMTISKDRVKPS---PL 704 (875)
Q Consensus 629 ~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~---~~ 704 (875)
|++|+.+|++||+++.|+++.+.|.+.+++...+.++. ....+.+++++|++|++++++.+ .++++.+++.+. ++
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999999876554433 23456899999999999999987 588888876432 23
Q ss_pred CC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccccccCCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcC
Q 002832 705 PD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRAR 783 (875)
Q Consensus 705 ~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 783 (875)
|. +......+...+..+++..+..++.|++.....|+...... +..+... .....++.|.+..+.++..+.+++.
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~T~~f~~~~~~~~~~~~~~~~ 998 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPV-DLEKENF---PNLLNTVLFFVSSFQYLITAIVNSK 998 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCC-CcccccC---ccHHHHHHHHHHHHHHHHheEEEcC
Confidence 33 33334556666677777777777666665543332111110 0000000 0123455555556666667777776
Q ss_pred CCcc
Q 002832 784 SWSF 787 (875)
Q Consensus 784 ~~~~ 787 (875)
..++
T Consensus 999 g~pf 1002 (1054)
T TIGR01657 999 GPPF 1002 (1054)
T ss_pred Ccch
Confidence 5443
No 16
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.5e-100 Score=956.03 Aligned_cols=789 Identities=18% Similarity=0.242 Sum_probs=576.8
Q ss_pred cCCCccccccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 49 FGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNA 124 (875)
Q Consensus 49 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~ 124 (875)
|.+|.+...|++.| +.|++||.++++++|++.++++++...... ..+...++++++++++.+.+++++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~--~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT--YRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC--CccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999998875 689999999999999999999998643221 123334555566668889999999999988
Q ss_pred HHHHhhccCCcEEEEEC-CeEEEEecCCcCCCcEEEEecCCccccceEEEecCC----eeeeccccCCCCeeeecCCC--
Q 002832 125 AAALMASLAPKSKVLRD-GKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKGPG-- 197 (875)
Q Consensus 125 ~~~l~~~~~~~~~V~rd-g~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~----l~VdeS~LTGEs~pv~K~~~-- 197 (875)
.++. ++++++|+|| |++++++++||+|||+|.|++||+||||++|+++++ +.||||+|||||.|+.|.+.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 7654 4688999997 899999999999999999999999999999998654 78999999999999988631
Q ss_pred ----------------------------------------------Cceeecceecc-CceeEEEEEecchhhhhhhhhh
Q 002832 198 ----------------------------------------------DSVYSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 230 (875)
Q Consensus 198 ----------------------------------------------~~v~~Gt~v~~-G~~~~~V~~tG~~T~~g~i~~~ 230 (875)
|++++||.+.+ |.+.|+|++||++|++++....
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~ 235 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQ 235 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCC
Confidence 46889999998 8999999999999988764321
Q ss_pred hcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc----CCc---------------hhhHHHHHHHHHHhcCC
Q 002832 231 VDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQH----RKY---------------RPGIDNLLVLLIGGIPI 291 (875)
Q Consensus 231 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~llv~~iP~ 291 (875)
...+.+++++.++++..+++++.++.+++..++...... ..| ...+..++.++..++|+
T Consensus 236 --~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 236 --APSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred --CcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 235679999999999877554333332222222111111 012 11455677889999999
Q ss_pred chHHHHHHHHHHHH------HHHHhc----CCccccchhhhhccCceEEEecccCccccCcccceeeeEEec--cCC---
Q 002832 292 AMPTVLSVTMAIGS------HRLSLQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIF--AKG--- 356 (875)
Q Consensus 292 ~Lp~~~~i~~~~~~------~~l~~~----~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~--~~~--- 356 (875)
+||+++++++.+++ .+|.++ ++++|+++++|+||++++||+|||||||+|+|+++++.+... ..+
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 788874 599999999999999999999999999999999999875311 000
Q ss_pred --------C--------------------C----------------hHHHHHHHHHhccc--------------cccChH
Q 002832 357 --------V--------------------D----------------ADAVVLMAARASRV--------------ENQDAI 378 (875)
Q Consensus 357 --------~--------------------~----------------~~~~l~~~~~~~~~--------------~~~~~~ 378 (875)
. + ..+++..++.|+.. ..++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 0 01233344444321 135899
Q ss_pred HHHHHHhcCCh---------H---------HHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC-
Q 002832 379 DAAIVGMLADP---------K---------EARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN- 439 (875)
Q Consensus 379 ~~ai~~~~~~~---------~---------~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~- 439 (875)
|.|++.++... . .....++.++.+||+|+||||++++++++|++++++|||||.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 99998864221 0 1124578899999999999999999988888899999999999999985
Q ss_pred ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc-------------------------CCCCCCeeEEEEeccCCCCC
Q 002832 440 KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK-------------------------ESSGGPWQFIGLMPLFDPPR 494 (875)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~-------------------------~~~e~~l~~lG~i~~~D~lr 494 (875)
.++.++.+.+.+++++.+|+||+++|||.+++.+. +..|+||+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 34567788999999999999999999999875321 24589999999999999999
Q ss_pred CChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC------------------------------------
Q 002832 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS------------------------------------ 538 (875)
Q Consensus 495 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~------------------------------------ 538 (875)
||++++|++||+|||++||+|||+++||.+||++||+..+....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 99999999999999999999999999999999999997543211
Q ss_pred ---cccccccccccCCc---ccHHHHhhhCc--EEEEeCHHHHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 539 ---SALLGQNKDESIVA---LPVDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 539 ---~~~~~~~~~~~~~~---~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~-g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
.+++|++++..+++ .++.+++.+++ ||||++|+||.++|+.+|+. |++|+|||||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 13444444322221 12444556666 99999999999999999998 99999999999999999999999987
Q ss_pred c--CccHHHhhccCEEecCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CcCHHHHHH
Q 002832 610 A--DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKF----DFPPFMVLI 682 (875)
Q Consensus 610 g--~gtd~ak~aADivL~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~----~~~~~~~l~ 682 (875)
. +|. .|+++||+++.+ |+.+.+++ .+||++|+|+++++.|.++.|+..++..+++.++.++ ++.+++++|
T Consensus 794 ~g~eg~-qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 870 (1057)
T TIGR01652 794 SGKEGM-QAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVL 870 (1057)
T ss_pred cChHHH-HHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 3 333 467799999975 99999998 7899999999999999999999877777666554332 577888999
Q ss_pred HHHhhccc-ccccc-CCCCCC-------CC-----CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccccc
Q 002832 683 IAILNDGT-IMTIS-KDRVKP-------SP-----LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVS 748 (875)
Q Consensus 683 ~~~~~~~~-~~~l~-~~~~~~-------~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (875)
+|++.+.+ +++++ +|...+ |+ +.......+.+..+++.|++++++.+++.++.+..... ..
T Consensus 871 ~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~---~~-- 945 (1057)
T TIGR01652 871 YNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDF---VS-- 945 (1057)
T ss_pred HHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc---cc--
Confidence 99999877 47775 343321 11 11122234556677889999998877655444421100 00
Q ss_pred cCCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccCchHHHHHHHHHHHHHHHHH-HHhh-c---ccccccCch
Q 002832 749 SLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLI-AVYA-N---WSFAAIEGV 823 (875)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~-~---~~~~~~~~~ 823 (875)
.+ ...++..+.+.++...++..++. +...+++|+|......|..+.+. ++..++ ..+. . .+.......
T Consensus 946 --~g-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~wt~~~~~~~~~S~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1057)
T TIGR01652 946 --SG-SLDDFSSVGVIVFTALVVIVNLK-IALEINRWNWISLITIWGSILVW---LIFVIVYSSIFPSPAFYKAAPRVMG 1018 (1057)
T ss_pred --CC-cccchhhHHHHHHHHHHHHHHHH-HHHHHhHhHHHHHHHHHHHHHHH---HHHHHHHHhhcccccHHHHHHHHHc
Confidence 01 11112234555555554444442 23345556554322222211111 111111 1010 0 001111122
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchh
Q 002832 824 GWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWD 859 (875)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~ 859 (875)
++.+|+.+++..++.++++.++|+++|.++|...+.
T Consensus 1019 s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~ 1054 (1057)
T TIGR01652 1019 TFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDI 1054 (1057)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 355667777788888889999999999998855443
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.2e-99 Score=882.21 Aligned_cols=546 Identities=24% Similarity=0.361 Sum_probs=450.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHhCCC--CCCch--hhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhccCC-cEE
Q 002832 67 GFMWNPLSWVMEAAAIMAIALANGGG--KPPDW--QDFVGIVTLLLINSTISFIE----ENNAGNAAAALMASLAP-KSK 137 (875)
Q Consensus 67 ~~~~~~~~~~l~~~~il~~~~~~~~~--~~~~~--~~~~~ii~~i~~~~~~~~~~----e~~~~~~~~~l~~~~~~-~~~ 137 (875)
.+++||+.|+++++++++++++.... ....| .+.+.|.++++++.+++.++ |+|+++++++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 46789999999999999998864211 11122 44666667777777777666 78999999999998886 776
Q ss_pred -EEECCeEEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCC---CceeecceeccCceeE
Q 002832 138 -VLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DSVYSGSTCKQGEIEA 213 (875)
Q Consensus 138 -V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~---~~v~~Gt~v~~G~~~~ 213 (875)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|++| +.+|+||.+.+|++++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 7899999999999999999999999999999999999986 8999999999999999999 8899999999999999
Q ss_pred EEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCc
Q 002832 214 VVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIA 292 (875)
Q Consensus 214 ~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~ 292 (875)
+|+++|.+|++||+.++++++ .+++|+|.....+...+.. +++..++ ++..+ ....++...+...+++++++|||+
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-i~l~~~~-~~~~~-~~~~~~~~~~~~~val~V~~IP~a 263 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-IFLVVIL-TMYPL-AKFLNFNLSIAMLIALAVCLIPTT 263 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-HHHHHHH-HHHHH-HhhccHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999987 5789998766555332211 1111111 11111 111233345566778888999999
Q ss_pred hHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccc
Q 002832 293 MPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRV 372 (875)
Q Consensus 293 Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~ 372 (875)
||..++++.+.|++||+|+|+++|+++++|++|++|++|||||||||+|++.+.+.. .. .+.+.++++..+..++.
T Consensus 264 L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~--~~-~~~~~~~ll~~a~~~~~- 339 (673)
T PRK14010 264 IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI--PV-KSSSFERLVKAAYESSI- 339 (673)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE--eC-CCccHHHHHHHHHHhcC-
Confidence 999999999999999999999999999999999999999999999999877665532 22 24555667777666654
Q ss_pred cccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCCh-HHHHHHHHHH
Q 002832 373 ENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKS-EIERRVHAII 451 (875)
Q Consensus 373 ~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~-~~~~~~~~~~ 451 (875)
.+.||++.|++.++.+... .......+++||++++|+|++.+ +|+ .+.||+||.++++|.... ..+.++++..
T Consensus 340 ~s~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 340 ADDTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred CCCChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 3568999999887542210 00111235689999999999864 243 456999999999997421 1233466677
Q ss_pred HHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCC
Q 002832 452 DKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 531 (875)
Q Consensus 452 ~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi 531 (875)
++++++|+|+++++. |++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||
T Consensus 414 ~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 414 KGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred HHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 889999999999874 3489999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecC
Q 002832 532 GTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (875)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~ 611 (875)
. ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||||+
T Consensus 481 ~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 481 D------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred c------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 4 3799999999999999999999999999999999999999999999999
Q ss_pred ccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL 669 (875)
Q Consensus 612 gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 669 (875)
|||+|||+||+||+||||++|++++++||++|.|++|++.|+++.|++..+..+.+.+
T Consensus 531 GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999997766554433
No 18
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=7e-96 Score=853.59 Aligned_cols=536 Identities=25% Similarity=0.333 Sum_probs=447.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHhCC----CC---CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-cEEE
Q 002832 67 GFMWNPLSWVMEAAAIMAIALANGG----GK---PPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAP-KSKV 138 (875)
Q Consensus 67 ~~~~~~~~~~l~~~~il~~~~~~~~----~~---~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~-~~~V 138 (875)
.+|+||+.++++++++++++++... +. ...|...+.+++.+++..+++.++|+|+++.+++|+++.++ +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5789999999999999999886321 11 11233334444555667778889999999999999998875 6999
Q ss_pred EECCe-EEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCCCc---eeecceeccCceeEE
Q 002832 139 LRDGK-WMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDS---VYSGSTCKQGEIEAV 214 (875)
Q Consensus 139 ~rdg~-~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~---v~~Gt~v~~G~~~~~ 214 (875)
+|||+ +++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|++|+. +|+||.|.+|+++++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 8999999999999999999999999999999984 899999999999999999988 999999999999999
Q ss_pred EEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCch
Q 002832 215 VIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAM 293 (875)
Q Consensus 215 V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L 293 (875)
|+++|.+|.+||+.++++++ .+++|+|...+.+..++..++++.++..+.+.++ .+.. ..+...+++++++|||++
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~al 264 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTTI 264 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccchh
Confidence 99999999999999999987 6689999887776554432222222211111111 1222 367778899999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhcccc
Q 002832 294 PTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVE 373 (875)
Q Consensus 294 p~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 373 (875)
+..++++...|+.||+|+|+++|+++++|++|++|++|||||||||+|+|.+.+++ .. .+.++++++..++.++...
T Consensus 265 g~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~a~~~s~~s 341 (679)
T PRK01122 265 GGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFL--PV-PGVTEEELADAAQLSSLAD 341 (679)
T ss_pred hhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEE--eC-CCCCHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999998754 22 3566777777777766544
Q ss_pred ccChHHHHHHHhcCCh---HHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCC-hHHHHHHHH
Q 002832 374 NQDAIDAAIVGMLADP---KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK-SEIERRVHA 449 (875)
Q Consensus 374 ~~~~~~~ai~~~~~~~---~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~ 449 (875)
.||.++++++++.+. ......++..+.+||++.++++++.+ +| ..+.||++|.+++.|... .+.++++++
T Consensus 342 -~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~ 415 (679)
T PRK01122 342 -ETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDA 415 (679)
T ss_pred -CCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHH
Confidence 469999998875431 11111245677899999988887643 34 468999999999999542 233567788
Q ss_pred HHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh
Q 002832 450 IIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (875)
Q Consensus 450 ~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (875)
..++++++|+|++++|++ ++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++
T Consensus 416 ~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 889999999999999974 3899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 530 GMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 530 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
||. ++|||++||||.++|+.+|++|++|+|||||+||+|||++|||||||
T Consensus 483 GId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 483 GVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred CCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 994 27999999999999999999999999999999999999999999999
Q ss_pred cCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 610 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 658 (875)
Q Consensus 610 g~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni 658 (875)
|+|||+|||+||+||+||||++|++++++||++.-.--....|+++.-+
T Consensus 533 gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 533 NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999999999999998443444667765444
No 19
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.4e-93 Score=883.18 Aligned_cols=790 Identities=16% Similarity=0.172 Sum_probs=565.3
Q ss_pred HhcCCCccccccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 47 TIFGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAG 122 (875)
Q Consensus 47 ~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~ 122 (875)
.+|..|.+...|++.| +.+++||..+.++++++.++++++...... ..+...+.+++++++.++.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~--~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF--GRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC--CcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3688999999998865 578899999999999999999987643221 2345567777778888899999999998
Q ss_pred HHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEecCC----eeeeccccCCCCeeeecCCC-
Q 002832 123 NAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKGPG- 197 (875)
Q Consensus 123 ~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~----l~VdeS~LTGEs~pv~K~~~- 197 (875)
++.++. ++.+++|+|+|+++++++++|+|||+|++++||+||||+++++++. ++||||+|||||.|+.|.++
T Consensus 163 k~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 887654 4578999999999999999999999999999999999999998433 68999999999999999642
Q ss_pred --------------------------------------------CceeecceeccC-ceeEEEEEecchhhhhhhhhhhc
Q 002832 198 --------------------------------------------DSVYSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 232 (875)
Q Consensus 198 --------------------------------------------~~v~~Gt~v~~G-~~~~~V~~tG~~T~~g~i~~~~~ 232 (875)
+.+++||.+.+. .+.|+|++||++|+..+ ...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~---N~~ 316 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML---NNS 316 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh---cCC
Confidence 235566666655 59999999999997432 222
Q ss_pred c-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhccc-C-----Cc--------------------hhh---HHH
Q 002832 233 S-TNQQGHFQKVLTAIGNFCICSIAVGMIVEIIV--MYPIQH-R-----KY--------------------RPG---IDN 280 (875)
Q Consensus 233 ~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~-~-----~~--------------------~~~---~~~ 280 (875)
. ..+.+++++.+|++..+++++.++.+++..+. .|.... . .| ... +..
T Consensus 317 ~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 396 (1178)
T PLN03190 317 GAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLM 396 (1178)
T ss_pred CCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHH
Confidence 2 25789999999999776544433332222222 111100 0 00 011 222
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHhcC----------CccccchhhhhccCceEEEecccCccccCcccceeeeE
Q 002832 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLI 350 (875)
Q Consensus 281 ~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~----------ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~ 350 (875)
.++++...||++|+++++++....+.+|.+++ +.+|+.+..|+||+|++||+|||||||+|+|+++++.+
T Consensus 397 ~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i 476 (1178)
T PLN03190 397 SVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASI 476 (1178)
T ss_pred HHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEE
Confidence 34566689999999999999988788887755 78999999999999999999999999999999999876
Q ss_pred Ee--ccC-----------------C----------C------------C-h-----HHHHHHHHHhccc-----------
Q 002832 351 EI--FAK-----------------G----------V------------D-A-----DAVVLMAARASRV----------- 372 (875)
Q Consensus 351 ~~--~~~-----------------~----------~------------~-~-----~~~l~~~~~~~~~----------- 372 (875)
.. ++. + . + + .+++.+.+.|+..
T Consensus 477 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~ 556 (1178)
T PLN03190 477 WGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDP 556 (1178)
T ss_pred CCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCc
Confidence 21 100 0 0 0 0 1233444444321
Q ss_pred -------cccChHHHHHHHhcCCh----------------HHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCc
Q 002832 373 -------ENQDAIDAAIVGMLADP----------------KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGA 429 (875)
Q Consensus 373 -------~~~~~~~~ai~~~~~~~----------------~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa 429 (875)
...+|.|.|++..+.+. ...+..|+.++.+||+|+|||||+++++++|++++++|||
T Consensus 557 ~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA 636 (1178)
T PLN03190 557 TVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGA 636 (1178)
T ss_pred cccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecC
Confidence 12379999998875321 1235678999999999999999999998888899999999
Q ss_pred HHHHHHhccCC--hHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc-------------------------CCCCCCee
Q 002832 430 PEQILNLVRNK--SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK-------------------------ESSGGPWQ 482 (875)
Q Consensus 430 ~e~i~~~~~~~--~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~-------------------------~~~e~~l~ 482 (875)
||.|+++|... .+.++++.+.+++++++|+|||++|||.+++.+. +..|+||+
T Consensus 637 ~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~ 716 (1178)
T PLN03190 637 DTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLT 716 (1178)
T ss_pred cHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcE
Confidence 99999999753 3457788899999999999999999999965321 24689999
Q ss_pred EEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCc-----------------------
Q 002832 483 FIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS----------------------- 539 (875)
Q Consensus 483 ~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~----------------------- 539 (875)
++|+++++||||++++++|++|+++||++||+|||+++||.+||++|||.++.....
T Consensus 717 ~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~ 796 (1178)
T PLN03190 717 ILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKK 796 (1178)
T ss_pred EEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhh
Confidence 999999999999999999999999999999999999999999999999975432111
Q ss_pred ------------------------ccccccccccCC---cccHHHHhhhCc--EEEEeCHHHHHHHHHHHhhC-CCEEEE
Q 002832 540 ------------------------ALLGQNKDESIV---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGM 589 (875)
Q Consensus 540 ------------------------~~~~~~~~~~~~---~~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~-g~~Vam 589 (875)
+++|.+++..++ .+.+.++..+++ ||||++|+||+++|+.+|++ +++|+|
T Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtla 876 (1178)
T PLN03190 797 LTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLA 876 (1178)
T ss_pred ccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEE
Confidence 122222221111 123455566666 79999999999999999997 589999
Q ss_pred EcCCccCHHHHhhCCceEEe-c-CccHHHhhccCEEecCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 590 TGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITIRIVLGFML 666 (875)
Q Consensus 590 ~GDG~NDapALk~AdVGIam-g-~gtd~ak~aADivL~~~~~~~i~~~i~-~gR~~~~~i~~~i~~~l~~ni~~~~~~~~ 666 (875)
+|||+||+||||+|||||++ | +|.++++ |||+.+.+ |..+.+++. +||+.|+|+.+.+.|.+++|+..++..++
T Consensus 877 IGDGaNDv~mIq~AdVGIGIsG~EG~qA~~-aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~ 953 (1178)
T PLN03190 877 IGDGANDVSMIQMADVGVGISGQEGRQAVM-ASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFW 953 (1178)
T ss_pred ECCCcchHHHHHhcCeeeeecCchhHHHHH-hhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987 4 6776665 99999965 777887774 79999999999999999999998888888
Q ss_pred HHHhhcCC----cCHHHHHHHHHhhcc-cccccc-CCCCCCCC------------CCCchhhHHHHHHHHHHHHHHHHHH
Q 002832 667 LALIWKFD----FPPFMVLIIAILNDG-TIMTIS-KDRVKPSP------------LPDSWKLAEIFTTGVILGGYLAMMT 728 (875)
Q Consensus 667 ~~~~~~~~----~~~~~~l~~~~~~~~-~~~~l~-~~~~~~~~------------~~~~~~~~~~~~~~~~~g~~~~~~~ 728 (875)
+.++.++. +.++.+.+.|++... ++++++ +|+.-|+. +.......+.|+.|++.|++++++.
T Consensus 954 f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~ii 1033 (1178)
T PLN03190 954 YVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVV 1033 (1178)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHH
Confidence 77776664 344555555555444 456663 66553321 1112223456777889999999887
Q ss_pred HHHHHHHHhcCcCCcccccccCCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccCchHHHHHHHHHHHH-HHH
Q 002832 729 VIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQL-IAT 807 (875)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~-~~~ 807 (875)
|++.++.+.... .+ +. ....++++..++..++. +...+++|.|......|..+.+.+... +..
T Consensus 1034 ff~~~~~~~~~~----~~-----~~------~~~~~~~~~~v~~vnl~-i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~ 1097 (1178)
T PLN03190 1034 FFVPLFAYWAST----ID-----GS------SIGDLWTLAVVILVNLH-LAMDIIRWNWITHAAIWGSIVATFICVIVID 1097 (1178)
T ss_pred HHHHHHHhcCCC----cC-----ce------eEhHhhhhHHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 765554442110 01 00 12233333444444442 223445565543322222221111110 000
Q ss_pred HHHHhhc-ccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhHHhh
Q 002832 808 LIAVYAN-WSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQ 864 (875)
Q Consensus 808 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~~ 864 (875)
.++.... +.+. ....++.+|+.+++..++.++++.++|++.|.++|...+..++.+
T Consensus 1098 ~~~~~~~~~~~~-~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~~ 1154 (1178)
T PLN03190 1098 AIPTLPGYWAIF-HIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREAE 1154 (1178)
T ss_pred hcccchhHHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 0010000 1111 111234567777888888889999999999999997766555433
No 20
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-93 Score=808.22 Aligned_cols=656 Identities=23% Similarity=0.325 Sum_probs=503.4
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHH
Q 002832 25 EVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIV 104 (875)
Q Consensus 25 ~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~ii 104 (875)
+..+......+||+.+++.+|+..||+|.+..+.++.+..++++..||| +++.+.+++-|... .+++++..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~d------~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLAD------SYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhcc------cchhhhhHHH
Confidence 3444444557899999999999999999999999999999999999999 67776666655542 2444455666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEec-CCccccceEEEecCCeeeecc
Q 002832 105 TLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKL-GDIIPADARLLEGDPLKIDQS 183 (875)
Q Consensus 105 ~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~-G~~vPaD~~ll~g~~l~VdeS 183 (875)
++.+.+...+.+|.++.++.++++. ..+..|+|+|||.|++|+++|||||||+++.+ |-..|||++|++|++ -||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv-~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMV-KFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-Eeecc
Confidence 6667788889999999998887764 34568999999999999999999999999998 889999999999997 59999
Q ss_pred ccCCCCeeeecCCC-------------------Cceeecceecc------CceeEEEEEecchhhhhhhhhhhcccCCCC
Q 002832 184 ALTGESLPVTKGPG-------------------DSVYSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQQG 238 (875)
Q Consensus 184 ~LTGEs~pv~K~~~-------------------~~v~~Gt~v~~------G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 238 (875)
+|||||.|+.|.|- +.+|+||.+.+ |.+.++|++||.+|..|++.+.+-.++ +.
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPk-P~ 378 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPK-PV 378 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCC-Cc
Confidence 99999999999872 46999999875 669999999999999999888776653 33
Q ss_pred cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCcccc
Q 002832 239 HFQKVLTAIGNFC-ICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKR 317 (875)
Q Consensus 239 ~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~ 317 (875)
+++-..+.+..+. +..+++..++..++.+...+.+....+.+.+.++...+|+|||.+++++..++.+||.|+||+|.+
T Consensus 379 ~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCis 458 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCIS 458 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcC
Confidence 4444444332111 111222222223333445567788889999999999999999999999999999999999999999
Q ss_pred chhhhhccCceEEEecccCccccCcccceeeeEEecc--CC----------------------CCh-HHHHHHHHHhccc
Q 002832 318 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFA--KG----------------------VDA-DAVVLMAARASRV 372 (875)
Q Consensus 318 ~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~--~~----------------------~~~-~~~l~~~~~~~~~ 372 (875)
++.+...|++|++|||||||||++.+.+..+.....+ .+ ..+ ..+....+.|...
T Consensus 459 P~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL 538 (1140)
T KOG0208|consen 459 PQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSL 538 (1140)
T ss_pred ccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhcee
Confidence 9999999999999999999999999998654320000 00 001 1222333333321
Q ss_pred ------cccChHHHHHHHhcC------------------------ChHH-----H----hhcccEEEEecCCCCCceEEE
Q 002832 373 ------ENQDAIDAAIVGMLA------------------------DPKE-----A----RANIQEVHFLPFNPTDKRTAL 413 (875)
Q Consensus 373 ------~~~~~~~~ai~~~~~------------------------~~~~-----~----~~~~~~l~~~pf~~~~k~~sv 413 (875)
..+||+|..+.+..+ ++.. . ...+..++.+||+|.-+||||
T Consensus 539 ~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSV 618 (1140)
T KOG0208|consen 539 TLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSV 618 (1140)
T ss_pred EEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEE
Confidence 135676544332110 0100 0 014678899999999999999
Q ss_pred EEEcC-CCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCC--------CcCCCCCCeeEE
Q 002832 414 TYIDS-EGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDG--------RKESSGGPWQFI 484 (875)
Q Consensus 414 ~~~~~-~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~--------~~~~~e~~l~~l 484 (875)
++.++ +.+.+.|+|||||.|.+.|+. +.+++++.+.++.|+.+|+||+|+|+|+++.. .++..|.||+|+
T Consensus 619 Iv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~Fl 697 (1140)
T KOG0208|consen 619 IVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFL 697 (1140)
T ss_pred EEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceee
Confidence 99864 567889999999999999985 46788999999999999999999999999765 367899999999
Q ss_pred EEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcc------------------------
Q 002832 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA------------------------ 540 (875)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~------------------------ 540 (875)
|++.|++++|++++.+|++|++|+||++|+||||..||..+||+||+.........
T Consensus 698 GLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~ 777 (1140)
T KOG0208|consen 698 GLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQ 777 (1140)
T ss_pred EEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccc
Confidence 99999999999999999999999999999999999999999999999653210000
Q ss_pred -----------------------------cccccccc--cCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEE
Q 002832 541 -----------------------------LLGQNKDE--SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589 (875)
Q Consensus 541 -----------------------------~~~~~~~~--~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam 589 (875)
+.|+..+- ....+.+++++.+.+|||||+|+||.++|+.||+-|+.|+|
T Consensus 778 ~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vgf 857 (1140)
T KOG0208|consen 778 FLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGF 857 (1140)
T ss_pred cCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEe
Confidence 00000000 00122356677889999999999999999999999999999
Q ss_pred EcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 590 TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL 669 (875)
Q Consensus 590 ~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 669 (875)
||||+|||.|||+||||||++++. |.-||.+.-.-.+++++++.|++||...-.--...+|...+.+...+.. .++
T Consensus 858 CGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv--~~L 933 (1140)
T KOG0208|consen 858 CGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISV--VFL 933 (1140)
T ss_pred cCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhh--hee
Confidence 999999999999999999999644 4457888888889999999999999986665555556555554332221 112
Q ss_pred h-hcCCcCHHHHHHHHHhhccc-ccccc
Q 002832 670 I-WKFDFPPFMVLIIAILNDGT-IMTIS 695 (875)
Q Consensus 670 ~-~~~~~~~~~~l~~~~~~~~~-~~~l~ 695 (875)
. -+..++-+|.+++.++-..+ +..++
T Consensus 934 Y~~~~nl~D~Qfl~iDLlii~pia~~m~ 961 (1140)
T KOG0208|consen 934 YLINSNLGDLQFLFIDLLIITPIAVMMS 961 (1140)
T ss_pred eeecccccchhhhhhHHHHHHHHHHHHc
Confidence 2 24467788888888776544 33443
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=9.9e-91 Score=808.30 Aligned_cols=539 Identities=24% Similarity=0.319 Sum_probs=448.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHhC---CC---CCCchhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCc-E
Q 002832 67 GFMWNPLSWVMEAAAIMAIALANG---GG---KPPDWQDF---VGIVTLLLINSTISFIEENNAGNAAAALMASLAPK-S 136 (875)
Q Consensus 67 ~~~~~~~~~~l~~~~il~~~~~~~---~~---~~~~~~~~---~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~-~ 136 (875)
.||.||+.++++++++++++++.. .+ ....|+++ +++++.+++..+++.++|+|+++.+++|+++.+++ +
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 578999999999999999988642 11 11236664 33334456778888899999999999999988774 8
Q ss_pred EEEE-CCeEEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCCCc---eeecceeccCcee
Q 002832 137 KVLR-DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDS---VYSGSTCKQGEIE 212 (875)
Q Consensus 137 ~V~r-dg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~---v~~Gt~v~~G~~~ 212 (875)
+|+| ||++++|++++|+|||+|.+++||+|||||++++|+ ..||||+|||||.|+.|++|+. +|+||.+.+|+++
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 899999999999999999999999999999999997 5899999999999999999874 9999999999999
Q ss_pred EEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCC
Q 002832 213 AVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPI 291 (875)
Q Consensus 213 ~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~ 291 (875)
++|+++|.+|++||+.++++++ .+++|+|...+.+..++.+++.+..+. +..+... ......+...+++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~-~~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAY-GGNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHh-cChhHHHHHHHHHHHHhCch
Confidence 9999999999999999999887 568999988777765543222221111 1111111 11123466678899999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhcc
Q 002832 292 AMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASR 371 (875)
Q Consensus 292 ~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~ 371 (875)
+|+...+.....|+.||+|+|+++|+++++|++|++|++|||||||||+|+|++.+++ .. .+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFI--PA-QGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEE--ec-CCCcHHHHHHHHHHhcC
Confidence 8877777777789999999999999999999999999999999999999999998754 22 35567777877777665
Q ss_pred ccccChHHHHHHHhcCChHH--HhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCC-hHHHHHHH
Q 002832 372 VENQDAIDAAIVGMLADPKE--ARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK-SEIERRVH 448 (875)
Q Consensus 372 ~~~~~~~~~ai~~~~~~~~~--~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~ 448 (875)
. ++||.+++++.++.+... ....++..+..||++.++++++.+. +| ..+.||+||.+++.|... ...+++++
T Consensus 341 ~-s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 A-DDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred C-CCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 4 457999999876542110 0112345678999999877765433 44 367899999999888532 22345677
Q ss_pred HHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH
Q 002832 449 AIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR 528 (875)
Q Consensus 449 ~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~ 528 (875)
+.+++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+||||+.+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88889999999999999853 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE
Q 002832 529 LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 529 lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
+|+. +++||++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 483 lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9994 3699999999999999999999999999999999999999999999
Q ss_pred ecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660 (875)
Q Consensus 609 mg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~ 660 (875)
|++|+++||++||++++||||++|++++++||+++-+......|+++.+++-
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~ 584 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAK 584 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHH
Confidence 9999999999999999999999999999999999999999999999877763
No 22
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-88 Score=787.55 Aligned_cols=504 Identities=28% Similarity=0.400 Sum_probs=434.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEE-CCeEEEEecCCcCCCcEEEEecCCccccceEEEecC
Q 002832 98 QDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLR-DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGD 176 (875)
Q Consensus 98 ~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r-dg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~ 176 (875)
.+++.+++++++..+++.+-..|+++++++|.++.|+++++++ ||++++||.+||+|||+|.++|||+||+||+|++|+
T Consensus 175 ~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~ 254 (713)
T COG2217 175 EEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGS 254 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCc
Confidence 5566677777788888888888889999999999999998776 566999999999999999999999999999999999
Q ss_pred CeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHH
Q 002832 177 PLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSI 255 (875)
Q Consensus 177 ~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~ 255 (875)
+ .||||+|||||.|+.|.+||.|++||.+.+|..+..|+++|.+|.++||.++++++ .+++|.|+..++++.++....
T Consensus 255 s-~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~v 333 (713)
T COG2217 255 S-SVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVV 333 (713)
T ss_pred E-EeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHH
Confidence 8 79999999999999999999999999999999999999999999999999999998 778999999999999887644
Q ss_pred HHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEeccc
Q 002832 256 AVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKT 335 (875)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKT 335 (875)
++..++.+++++.....+|..++...+++++++|||+|.+++|++...|..+.+|+|+++|+.+++|+++++|+++||||
T Consensus 334 l~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKT 413 (713)
T COG2217 334 LVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKT 413 (713)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCC
Confidence 44444444444444446788899999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEEEE
Q 002832 336 GTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTY 415 (875)
Q Consensus 336 GTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~~ 415 (875)
||||+|+++|.++. ... + ++++++.+++..+.. ++||+.+|++++..+.. ....+..+.+| .+.-.+
T Consensus 414 GTLT~G~p~v~~v~--~~~-~-~e~~~L~laAalE~~-S~HPiA~AIv~~a~~~~--~~~~~~~~~i~---G~Gv~~--- 480 (713)
T COG2217 414 GTLTEGKPEVTDVV--ALD-G-DEDELLALAAALEQH-SEHPLAKAIVKAAAERG--LPDVEDFEEIP---GRGVEA--- 480 (713)
T ss_pred CCCcCCceEEEEEe--cCC-C-CHHHHHHHHHHHHhc-CCChHHHHHHHHHHhcC--CCCccceeeec---cCcEEE---
Confidence 99999999998864 332 3 778888888776554 45799999998654321 11122233333 222222
Q ss_pred EcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCC
Q 002832 416 IDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRH 495 (875)
Q Consensus 416 ~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~ 495 (875)
.-+|+.+ ..|+++.+.+.-... .. ..+..+.+.++|..++.++.+. +++|+++++|++||
T Consensus 481 -~v~g~~v--~vG~~~~~~~~~~~~---~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~R~ 540 (713)
T COG2217 481 -EVDGERV--LVGNARLLGEEGIDL---PL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADELRP 540 (713)
T ss_pred -EECCEEE--EEcCHHHHhhcCCCc---cc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCCCh
Confidence 1256544 459999886532111 11 4556778889999999999876 89999999999999
Q ss_pred ChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHH
Q 002832 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYE 575 (875)
Q Consensus 496 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~ 575 (875)
|++++|++||+.|++++|+||||..+|.++|+++||. +++|.+.||||.+
T Consensus 541 ~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPedK~~ 590 (713)
T COG2217 541 DAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPEDKAE 590 (713)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHHHHH
Confidence 9999999999999999999999999999999999994 3799999999999
Q ss_pred HHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 576 IVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655 (875)
Q Consensus 576 iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~ 655 (875)
+|+.||++|++|+|+|||+||+|||++||||||||+|||+|+|+||++|++||++.++++++.+|+++++||+|+.|++.
T Consensus 591 ~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~ 670 (713)
T COG2217 591 IVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFG 670 (713)
T ss_pred HHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 002832 656 ITIRIVLGFM 665 (875)
Q Consensus 656 ~ni~~~~~~~ 665 (875)
+|...+....
T Consensus 671 yn~~~iplA~ 680 (713)
T COG2217 671 YNAIAIPLAA 680 (713)
T ss_pred HHHHHHHHHH
Confidence 9987665443
No 23
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=3.3e-82 Score=760.71 Aligned_cols=500 Identities=26% Similarity=0.355 Sum_probs=434.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEec
Q 002832 96 DWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEG 175 (875)
Q Consensus 96 ~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g 175 (875)
.|.+++.++++++++..++.++++|+++.+++|+++.+++++|+|||++++|++++|+|||+|.+++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 67788888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 002832 176 DPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICS 254 (875)
Q Consensus 176 ~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (875)
+. .||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+|||.++++++ .+++|+|+.++++++++...
T Consensus 285 ~~-~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 FA-SFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred cE-EeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 85 89999999999999999999999999999999999999999999999999999987 67899999999999987655
Q ss_pred HHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecc
Q 002832 255 IAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDK 334 (875)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DK 334 (875)
+++..++.+++++.....+|..++...+++++++|||+|.+++++++..+..+++|+|+++|+.+++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 54444444444334445667788899999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEE-
Q 002832 335 TGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTAL- 413 (875)
Q Consensus 335 TGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv- 413 (875)
|||||+|+|+|.++. .. .+.++++++.+++..+ ..++||+++|+++++.+. +. .+||.++.+.+.-
T Consensus 444 TGTLT~g~~~v~~~~--~~-~~~~~~~~l~~aa~~e-~~s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIH--PA-TGISESELLALAAAVE-QGSTHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEE--ec-CCCCHHHHHHHHHHHh-cCCCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 999999999998754 22 2456777777776543 345789999998875321 11 2466666655432
Q ss_pred EEE-cCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCC
Q 002832 414 TYI-DSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDP 492 (875)
Q Consensus 414 ~~~-~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~ 492 (875)
.++ ..+|+.+. .|+++.+.+ ..+++.+.++.+..+|+|++++|++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~~~--ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGERVL--ICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEEEE--Eecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 122 23565544 489998754 11344556678899999999999854 89999999999
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHH
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH 572 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 572 (875)
+|||++++|++||++|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999983 367889999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 002832 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (875)
Q Consensus 573 K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 652 (875)
|.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|+|+++++||++++++++..+++++++||++++|||+|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002832 653 AVSITIRIVLG 663 (875)
Q Consensus 653 ~l~~ni~~~~~ 663 (875)
++.+|+..+..
T Consensus 697 a~~~n~~~i~~ 707 (741)
T PRK11033 697 ALGLKAIFLVT 707 (741)
T ss_pred HHHHHHHHHHH
Confidence 99999765443
No 24
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-83 Score=727.51 Aligned_cols=533 Identities=25% Similarity=0.347 Sum_probs=444.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCe-EEEEecCCcCCCcEEEEecCCccccceEEEecCCee
Q 002832 101 VGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGK-WMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLK 179 (875)
Q Consensus 101 ~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~-~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~ 179 (875)
..++.++.+..+++...+.|+..++..|+.+.|.++.++.+|+ +++||.+.|++||+|.+.||++||+||++++|++ +
T Consensus 345 ~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~ 423 (951)
T KOG0207|consen 345 PMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-E 423 (951)
T ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-e
Confidence 4444566677777777778888899999999999999999996 8999999999999999999999999999999997 8
Q ss_pred eeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHH
Q 002832 180 IDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVG 258 (875)
Q Consensus 180 VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~ 258 (875)
||||++|||++||.|++|+.|.+||.+.+|.....++++|.+|.++||.++++++ ..++|.|+.+|+++.++...+++.
T Consensus 424 VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~l 503 (951)
T KOG0207|consen 424 VDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVL 503 (951)
T ss_pred echhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHH
Confidence 9999999999999999999999999999999999999999999999999999998 678999999999999875544444
Q ss_pred HHHHHHHhhhccc----------CCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCce
Q 002832 259 MIVEIIVMYPIQH----------RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMD 328 (875)
Q Consensus 259 ~~~~~~~~~~~~~----------~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~ 328 (875)
.+..+++|..+.. ..+..++...+++++++|||+|.++.|++...|...-+++|+++|..+++|.+.+++
T Consensus 504 S~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~ 583 (951)
T KOG0207|consen 504 SLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVK 583 (951)
T ss_pred HHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCC
Confidence 3333333332222 234456677788899999999999999999999999999999999999999999999
Q ss_pred EEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEE-EEecCCCC
Q 002832 329 VLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEV-HFLPFNPT 407 (875)
Q Consensus 329 ~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l-~~~pf~~~ 407 (875)
+++||||||||+|++.|.+.. ...+..+..+++.+++.. +....||+..|+++++.+.... .+...+ +.--|..+
T Consensus 584 tVvFDKTGTLT~G~~~V~~~~--~~~~~~~~~e~l~~v~a~-Es~SeHPig~AIv~yak~~~~~-~~~~~~~~~~~~pg~ 659 (951)
T KOG0207|consen 584 TVVFDKTGTLTEGKPTVVDFK--SLSNPISLKEALALVAAM-ESGSEHPIGKAIVDYAKEKLVE-PNPEGVLSFEYFPGE 659 (951)
T ss_pred EEEEcCCCceecceEEEEEEE--ecCCcccHHHHHHHHHHH-hcCCcCchHHHHHHHHHhcccc-cCccccceeecccCC
Confidence 999999999999999998865 343335566665555443 3355689999999997643311 111122 22122222
Q ss_pred CceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEe
Q 002832 408 DKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLM 487 (875)
Q Consensus 408 ~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i 487 (875)
.....+. .+++. +.-|+-+.+.+.-. ...++++..+++....|..+.+++... +++|++
T Consensus 660 g~~~~~~---~~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l~gv~ 718 (951)
T KOG0207|consen 660 GIYVTVT---VDGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG-------------QLVGVF 718 (951)
T ss_pred CcccceE---EeeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC-------------EEEEEE
Confidence 2221111 23443 55699998876422 224457778888899999999999987 899999
Q ss_pred ccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
.++|++|||+..+|+.||+.||+++|+||||..+|+++|+++|+. +|||.
T Consensus 719 ~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------~V~ae 768 (951)
T KOG0207|consen 719 ALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------NVYAE 768 (951)
T ss_pred EeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------eEEec
Confidence 999999999999999999999999999999999999999999974 48999
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHH
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~ 647 (875)
+.|+||.++||.+|++|+.|+|+|||+||+|||.+|||||+||.|+|+|.|+||+||+.+|+..++.+|+.+|++++|||
T Consensus 769 v~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk 848 (951)
T KOG0207|consen 769 VLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIK 848 (951)
T ss_pred cCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCcCHHHHHHHHHhhcc
Q 002832 648 NYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDG 689 (875)
Q Consensus 648 ~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 689 (875)
.|+.|++.+|+..++...+.++.+++.++|+.--....++.+
T Consensus 849 ~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSv 890 (951)
T KOG0207|consen 849 LNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSV 890 (951)
T ss_pred HHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhH
Confidence 999999999998887777776667777888765554444444
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=2.2e-79 Score=713.59 Aligned_cols=473 Identities=36% Similarity=0.544 Sum_probs=413.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh--ccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeec
Q 002832 105 TLLLINSTISFIEENNAGNAAAALMA--SLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQ 182 (875)
Q Consensus 105 ~~i~~~~~~~~~~e~~~~~~~~~l~~--~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~Vde 182 (875)
++++++.+++.++++++++..+++.+ ..+++++|+|+| +++|++++|+|||+|.+++||+|||||++++|++ .|||
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vde 81 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVDE 81 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEEc
Confidence 45677888999999999999999988 788899999999 9999999999999999999999999999999975 8999
Q ss_pred cccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHH-HHHHHHHHHHHH
Q 002832 183 SALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIG-NFCICSIAVGMI 260 (875)
Q Consensus 183 S~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~-~~~~~~~~~~~~ 260 (875)
|+|||||.|+.|.+|+.+++||.+.+|+.++.|+++|.+|..+++..++++. ..++++++..+++. .+++.++++..+
T Consensus 82 s~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 82 SNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred ccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999877 44788899999998 454433332222
Q ss_pred HHHHHhhhcccC--CchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCcc
Q 002832 261 VEIIVMYPIQHR--KYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTL 338 (875)
Q Consensus 261 ~~~~~~~~~~~~--~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTL 338 (875)
+.++.++..... +|..++..++++++++|||+||+++++++..+..+|+++|+++|+++++|+||++|++||||||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTL 241 (499)
T TIGR01494 162 AVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTL 241 (499)
T ss_pred HHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCcc
Confidence 222222221112 367788999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEEEEEcC
Q 002832 339 TLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDS 418 (875)
Q Consensus 339 T~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~ 418 (875)
|+|+|+|.++.. .. + ....+||++.|++++... +.++..||++.+++|++++...
T Consensus 242 T~~~~~v~~~~~--~~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~~ 296 (499)
T TIGR01494 242 TKNEMSFKKVSV--LG-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRGP 296 (499)
T ss_pred ccCceEEEEEEe--cC-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEecC
Confidence 999999988652 11 0 124568999999887542 1235679999999999888753
Q ss_pred CCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChH
Q 002832 419 EGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSA 498 (875)
Q Consensus 419 ~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~ 498 (875)
++ .++||+++.+.+.|.. +.+..+.++++|+|++++|++. +++|++.++|++|++++
T Consensus 297 ~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~~ 353 (499)
T TIGR01494 297 DG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDAK 353 (499)
T ss_pred Cc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhHH
Confidence 33 4689999999998752 2334456788999999999876 79999999999999999
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHH
Q 002832 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVK 578 (875)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~ 578 (875)
++|+.|+++|++++|+|||++.+|..+|+++|+ ++|++|+||.++|+
T Consensus 354 ~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v~ 400 (499)
T TIGR01494 354 ETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALVE 400 (499)
T ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHHH
Confidence 999999999999999999999999999999986 68899999999999
Q ss_pred HHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 579 RLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 658 (875)
Q Consensus 579 ~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni 658 (875)
.+|+.|+.|+|+|||+||+|||++|||||+|+ |+++||++|+++++..++.++++||++++++++++.|.+++|+
T Consensus 401 ~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~ 475 (499)
T TIGR01494 401 ALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNL 475 (499)
T ss_pred HHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997 7999999999999999999999999999999999999999998
Q ss_pred HHHHHHH
Q 002832 659 RIVLGFM 665 (875)
Q Consensus 659 ~~~~~~~ 665 (875)
..++..+
T Consensus 476 ~~~~~a~ 482 (499)
T TIGR01494 476 ILIPLAA 482 (499)
T ss_pred HHHHHHH
Confidence 8655443
No 26
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=2.5e-78 Score=706.64 Aligned_cols=499 Identities=29% Similarity=0.416 Sum_probs=424.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCC
Q 002832 76 VMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPG 155 (875)
Q Consensus 76 ~l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~G 155 (875)
++.++++++++.+ +|.++..++++++++..++.++++|+++.+++|.+..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4456667777763 789999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-
Q 002832 156 DIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (875)
Q Consensus 156 Div~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~- 234 (875)
|+|.+++||+|||||++++|+. .||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|.+||+.++++++
T Consensus 77 Div~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 9999999999999999999986 79999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCc
Q 002832 235 NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (875)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~il 314 (875)
.+++++|+.++++++++...++...++.+++++... .+..++..++++++++|||+||+++++++..+..+++|+|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 578899999999988766554443333333333222 233377788899999999999999999999999999999999
Q ss_pred cccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhh
Q 002832 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARA 394 (875)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 394 (875)
+|+++++|++|++|++|||||||||+|+|+|.++. +.+++.+++.. +..+.||++.|+++++.+..
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~---------~~~~l~~a~~~-e~~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVV---------PAEVLRLAAAA-EQASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEee---------HHHHHHHHHHH-hccCCCcHHHHHHHHHHhcC----
Confidence 99999999999999999999999999999998753 12566666543 34567899999988764321
Q ss_pred cccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc
Q 002832 395 NIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK 474 (875)
Q Consensus 395 ~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~ 474 (875)
.....+.+|. +. ... ..+|+.+ ..|+++.+.+... ..+..+|.+++.++.+.
T Consensus 300 ~~~~~~~~~g---~g-i~~---~~~g~~~--~ig~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~------ 351 (536)
T TIGR01512 300 NVESVEEVPG---EG-VRA---VVDGGEV--RIGNPRSLEAAVG-------------ARPESAGKTIVHVARDG------ 351 (536)
T ss_pred CCcceEEecC---Ce-EEE---EECCeEE--EEcCHHHHhhcCC-------------cchhhCCCeEEEEEECC------
Confidence 2222233321 11 111 1245544 3588876643210 14567888888887643
Q ss_pred CCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCC-cEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcc
Q 002832 475 ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVAL 553 (875)
Q Consensus 475 ~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~ 553 (875)
.++|.+.++|++||+++++|++|+++|+ ++.|+|||+..+|.++++++|+.
T Consensus 352 -------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------------- 403 (536)
T TIGR01512 352 -------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--------------------- 403 (536)
T ss_pred -------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------------
Confidence 8999999999999999999999999999 99999999999999999999984
Q ss_pred cHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-CccHHHhhccCEEecCCChhHH
Q 002832 554 PVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVI 632 (875)
Q Consensus 554 ~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~gtd~ak~aADivL~~~~~~~i 632 (875)
++|+++.|++|.++++.++++++.|+|+|||.||+||+++||+||++| +|++.++++||+++++++++.+
T Consensus 404 ---------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 404 ---------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ---------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 258899999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 633 ISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 663 (875)
Q Consensus 633 ~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~ 663 (875)
.+++++||++++|+++|+.|++.+|+..+..
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 505 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLILL 505 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999775543
No 27
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.3e-77 Score=705.07 Aligned_cols=517 Identities=26% Similarity=0.383 Sum_probs=432.1
Q ss_pred HHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECC-eEEEEecCCcCCC
Q 002832 77 MEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDG-KWMEEDAAILVPG 155 (875)
Q Consensus 77 l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg-~~~~I~~~~Lv~G 155 (875)
+.++++++++.+ .|.++..++++++++.++++++++|+++.+++|.+..+++++|+||| ++++|++++|+||
T Consensus 5 ~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~G 77 (556)
T TIGR01525 5 MALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVG 77 (556)
T ss_pred HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCC
Confidence 344555666653 78889999999999999999999999999999999999999999996 9999999999999
Q ss_pred cEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-
Q 002832 156 DIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (875)
Q Consensus 156 Div~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~- 234 (875)
|+|.+++||+|||||+|++|+. .||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|.+|++.++++++
T Consensus 78 Div~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~ 156 (556)
T TIGR01525 78 DIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQ 156 (556)
T ss_pred CEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHh
Confidence 9999999999999999999985 89999999999999999999999999999999999999999999999999998876
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCc
Q 002832 235 NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (875)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~il 314 (875)
.+++++++.++++++++...+++..++.+++++.. ... ..+..++++++++|||+||++++++++.+.++|+++|++
T Consensus 157 ~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~-~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gil 233 (556)
T TIGR01525 157 SSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL-GAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGIL 233 (556)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCce
Confidence 67899999999998886554443333333333222 222 678889999999999999999999999999999999999
Q ss_pred cccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCC--hHHHHHHHHHhccccccChHHHHHHHhcCChHHH
Q 002832 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVD--ADAVVLMAARASRVENQDAIDAAIVGMLADPKEA 392 (875)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~ 392 (875)
+|+++++|++|++|++|||||||||+|+|+|.++. ... +.+ +++++.+++..+. ...||++.|+.+++.+....
T Consensus 234 vk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~--~~~-~~~~~~~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~~~ 309 (556)
T TIGR01525 234 IKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVE--PLD-DASISEEELLALAAALEQ-SSSHPLARAIVRYAKKRGLE 309 (556)
T ss_pred ecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEE--ecC-CCCccHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999998764 222 222 5667766665543 45689999999886432110
Q ss_pred hhccc-EEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCC
Q 002832 393 RANIQ-EVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPD 471 (875)
Q Consensus 393 ~~~~~-~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~ 471 (875)
... + ..+++| .+ ..... .+|. ..+..|+++.+ +. ... + ..+..+.++.++++|+|+++++.+.
T Consensus 310 ~~~-~~~~~~~~---~~-gi~~~---~~g~-~~~~lg~~~~~-~~-~~~-~-~~~~~~~~~~~~~~g~~~~~v~~~~--- 373 (556)
T TIGR01525 310 LPK-QEDVEEVP---GK-GVEAT---VDGQ-EEVRIGNPRLL-EL-AAE-P-ISASPDLLNEGESQGKTVVFVAVDG--- 373 (556)
T ss_pred ccc-ccCeeEec---CC-eEEEE---ECCe-eEEEEecHHHH-hh-cCC-C-chhhHHHHHHHhhCCcEEEEEEECC---
Confidence 000 1 122221 11 11111 1341 23456999876 21 111 1 1223455667889999999999754
Q ss_pred CCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCC-CcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccC
Q 002832 472 GRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESI 550 (875)
Q Consensus 472 ~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~ 550 (875)
+++|.+.++|++|||++++|++|+++| +++.|+|||+..++.++++++|+.
T Consensus 374 ----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~------------------ 425 (556)
T TIGR01525 374 ----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID------------------ 425 (556)
T ss_pred ----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC------------------
Confidence 899999999999999999999999999 999999999999999999999994
Q ss_pred CcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChh
Q 002832 551 VALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 630 (875)
Q Consensus 551 ~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~ 630 (875)
++|+++.|++|.++++.+|+.|+.|+|+|||.||+||+++|||||++|++++.++++||+++.+++++
T Consensus 426 ------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~ 493 (556)
T TIGR01525 426 ------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLS 493 (556)
T ss_pred ------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHH
Confidence 26899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 664 (875)
Q Consensus 631 ~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~ 664 (875)
.+++++++||++++||++++.|++.+|+..+...
T Consensus 494 ~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a 527 (556)
T TIGR01525 494 SLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLA 527 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998865443
No 28
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=2.3e-77 Score=700.65 Aligned_cols=505 Identities=27% Similarity=0.405 Sum_probs=420.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEEC-CeEEEEecCCcCCCcEEEEecCCccccceEEEec
Q 002832 97 WQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD-GKWMEEDAAILVPGDIISVKLGDIIPADARLLEG 175 (875)
Q Consensus 97 ~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd-g~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g 175 (875)
|.+...++++++++.+++.+.++|+++.+++|.+..|++++++|+ |++++|+.++|+|||+|.+++||+|||||+|++|
T Consensus 54 ~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g 133 (562)
T TIGR01511 54 FDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEG 133 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEEC
Confidence 344445566667777888888889999999999999999999985 6779999999999999999999999999999999
Q ss_pred CCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 002832 176 DPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICS 254 (875)
Q Consensus 176 ~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (875)
++ .||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+||+.++++++ .+++++|+..+++++++...
T Consensus 134 ~~-~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~ 212 (562)
T TIGR01511 134 ES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPV 212 (562)
T ss_pred ce-EEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence 96 79999999999999999999999999999999999999999999999999999887 67899999999999887554
Q ss_pred HHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecc
Q 002832 255 IAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDK 334 (875)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DK 334 (875)
+++..++.++. | ..++...+++++++|||+|++++++++..+..+++|+|+++|+++++|+|+++|++||||
T Consensus 213 v~~~a~~~~~~-~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDK 284 (562)
T TIGR01511 213 VIAIALITFVI-W-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDK 284 (562)
T ss_pred HHHHHHHHHHH-H-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECC
Confidence 43333332222 2 247788999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEEE
Q 002832 335 TGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALT 414 (875)
Q Consensus 335 TGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~ 414 (875)
|||||+|+|+|.++. .. .+.++++++.+++..+. .+.||+++|+++++.+...........+.+| . +.....
T Consensus 285 TGTLT~g~~~v~~i~--~~-~~~~~~~~l~~aa~~e~-~s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~---g-~Gi~~~ 356 (562)
T TIGR01511 285 TGTLTQGKPTVTDVH--VF-GDRDRTELLALAAALEA-GSEHPLAKAIVSYAKEKGITLVEVSDFKAIP---G-IGVEGT 356 (562)
T ss_pred CCCCcCCCEEEEEEe--cC-CCCCHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcCCCcCCCCCeEEEC---C-ceEEEE
Confidence 999999999998754 22 24556777777765544 3467999999987643211111112222222 1 111111
Q ss_pred EEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCC
Q 002832 415 YIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPR 494 (875)
Q Consensus 415 ~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 494 (875)
.+|+. +..|+++.+.+.... +..+.++|.+++.++.+. +++|.+.++|++|
T Consensus 357 ---~~g~~--~~iG~~~~~~~~~~~-----------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l~ 407 (562)
T TIGR01511 357 ---VEGTK--IQLGNEKLLGENAIK-----------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQLR 407 (562)
T ss_pred ---ECCEE--EEEECHHHHHhCCCC-----------CChhhhCCCEEEEEEECC-------------EEEEEEEeccccc
Confidence 24543 456999987542111 112457899999988754 8999999999999
Q ss_pred CChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHH
Q 002832 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKY 574 (875)
Q Consensus 495 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~ 574 (875)
|+++++|++||+.|+++.|+|||+..+|.++++++|+. +|+++.|++|.
T Consensus 408 ~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K~ 456 (562)
T TIGR01511 408 PEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDKA 456 (562)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHHH
Confidence 99999999999999999999999999999999999982 47888999999
Q ss_pred HHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654 (875)
Q Consensus 575 ~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l 654 (875)
++++.+|++++.|+|+|||.||+||+++|||||+||.|++.++++||+++++++++.++.++++||+++++|++|+.|++
T Consensus 457 ~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~ 536 (562)
T TIGR01511 457 ALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAF 536 (562)
T ss_pred HHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCcCHH
Q 002832 655 SITIRIVLGFMLLALIWKFDFPPF 678 (875)
Q Consensus 655 ~~ni~~~~~~~~~~~~~~~~~~~~ 678 (875)
.+|+..+...++.++.+++.++|+
T Consensus 537 ~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 537 GYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHhhhhccccccCCC
Confidence 999887665555444455456654
No 29
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=5.4e-76 Score=721.01 Aligned_cols=522 Identities=25% Similarity=0.337 Sum_probs=432.7
Q ss_pred hhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEec
Q 002832 97 WQD-FVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEG 175 (875)
Q Consensus 97 ~~~-~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g 175 (875)
|++ +..++++++++.+++...+.|+.+.+++|.++.|++++|+|||++++|+.++|+|||+|.+++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 444 5666777788888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 002832 176 DPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICS 254 (875)
Q Consensus 176 ~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (875)
+. .||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+|||.++++++ ..++++|+..++++++++.+
T Consensus 365 ~~-~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 EA-WLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred eE-EEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 85 89999999999999999999999999999999999999999999999999999887 66889999999999876654
Q ss_pred HHHHHHHHHHHhhhccc-CCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEec
Q 002832 255 IAVGMIVEIIVMYPIQH-RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSD 333 (875)
Q Consensus 255 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~D 333 (875)
+++..++.+++++.... ..|...+...+++++++|||+|++++++++..+..+++|+|+++|+++++|+++++|++|||
T Consensus 444 v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fD 523 (834)
T PRK10671 444 VVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFD 523 (834)
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEc
Confidence 44333333333322211 12445677788999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEE
Q 002832 334 KTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTAL 413 (875)
Q Consensus 334 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv 413 (875)
||||||+|+|+|.+.. .. .+.++++++.+++..+. ...||+++|++++..+. ....+ .+|.....+ ++
T Consensus 524 KTGTLT~g~~~v~~~~--~~-~~~~~~~~l~~a~~~e~-~s~hp~a~Ai~~~~~~~-----~~~~~--~~~~~~~g~-Gv 591 (834)
T PRK10671 524 KTGTLTEGKPQVVAVK--TF-NGVDEAQALRLAAALEQ-GSSHPLARAILDKAGDM-----TLPQV--NGFRTLRGL-GV 591 (834)
T ss_pred CCCccccCceEEEEEE--cc-CCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHhhC-----CCCCc--ccceEecce-EE
Confidence 9999999999998753 22 24566777777665543 45689999998765321 11111 112211111 11
Q ss_pred EEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCC
Q 002832 414 TYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPP 493 (875)
Q Consensus 414 ~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~l 493 (875)
... .+|+. +.+|+++.+.+.... .+.+.+.++.++++|.++++++++. +++|++.+.|++
T Consensus 592 ~~~-~~g~~--~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~ 651 (834)
T PRK10671 592 SGE-AEGHA--LLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPL 651 (834)
T ss_pred EEE-ECCEE--EEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcc
Confidence 111 24543 456999987553221 2345566778889999999999865 799999999999
Q ss_pred CCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHH
Q 002832 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHK 573 (875)
Q Consensus 494 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K 573 (875)
||+++++|++|++.|+++.|+|||+..+|.++++++||. ++|+++.|++|
T Consensus 652 r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~K 701 (834)
T PRK10671 652 RSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDGK 701 (834)
T ss_pred hhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHHH
Confidence 999999999999999999999999999999999999984 26899999999
Q ss_pred HHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (875)
Q Consensus 574 ~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 653 (875)
.++++.+|++|+.|+|+|||.||+|||++||+||+||+|+|.++++||+++++++++.|..++++||++++||++|+.|+
T Consensus 702 ~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a 781 (834)
T PRK10671 702 AEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGA 781 (834)
T ss_pred HHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh-hcCCcCHHHHH
Q 002832 654 VSITIRIVLGFMLLALI-WKFDFPPFMVL 681 (875)
Q Consensus 654 l~~ni~~~~~~~~~~~~-~~~~~~~~~~l 681 (875)
+.+|+..+...++.+.. +++.++|+.-.
T Consensus 782 ~~yn~~~i~~a~g~~~p~~g~~l~p~~a~ 810 (834)
T PRK10671 782 FIYNSLGIPIAAGILWPFTGTLLNPVVAG 810 (834)
T ss_pred HHHHHHHHHHHHhchhhhhhcccCHHHHH
Confidence 99998766544422221 23356776443
No 30
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.6e-79 Score=731.52 Aligned_cols=797 Identities=17% Similarity=0.207 Sum_probs=571.1
Q ss_pred HHHhcCCCccccccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 002832 45 RLTIFGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120 (875)
Q Consensus 45 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~e~~ 120 (875)
+..+|-.|.+...|++.+ +.+++||.++-+.+|++.++++++.. . +...|...+.+++++.++++.+.++++|
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~-~--~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPL-S--PFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcc-c--ccCccceeeceeeeehHHHHHHHHhhhh
Confidence 556999999999998754 68899999999999999999999862 2 3346677778888888899999999999
Q ss_pred HHHHHHHHhhccCCcEEEEECCe-EEEEecCCcCCCcEEEEecCCccccceEEEecCC----eeeeccccCCCCeeeecC
Q 002832 121 AGNAAAALMASLAPKSKVLRDGK-WMEEDAAILVPGDIISVKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKG 195 (875)
Q Consensus 121 ~~~~~~~l~~~~~~~~~V~rdg~-~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~----l~VdeS~LTGEs~pv~K~ 195 (875)
+++....+ +..++.|.|++. +++..|+++++||+|.+..++.+|||.++++++. ++|++++|+||+..+.|.
T Consensus 105 R~~~D~~i---N~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEV---NNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHh---hcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 99877554 457899998544 8999999999999999999999999999998663 789999999999988774
Q ss_pred C-----------------------------------------------CCceeecceeccCc-eeEEEEEecchhhhhhh
Q 002832 196 P-----------------------------------------------GDSVYSGSTCKQGE-IEAVVIATGVHTFFGKA 227 (875)
Q Consensus 196 ~-----------------------------------------------~~~v~~Gt~v~~G~-~~~~V~~tG~~T~~g~i 227 (875)
. .+++..|+.+.+.. +.++|+.||++|++++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 2 12467788888765 88999999999988764
Q ss_pred hhhhcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc--------------C----CchhhHHHHHHHHHHhc
Q 002832 228 AHLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQH--------------R----KYRPGIDNLLVLLIGGI 289 (875)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--------------~----~~~~~~~~~~~llv~~i 289 (875)
... .+.+++++++.+++....+++.++..+++..+....... . .....+..++.++...+
T Consensus 262 ~~~--~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 SGK--PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred cCC--CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 332 336778899999887655443332222222211110000 0 00112344556778899
Q ss_pred CCchHHHHHHHHHHHHHHHHh----------cCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCCh
Q 002832 290 PIAMPTVLSVTMAIGSHRLSL----------QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDA 359 (875)
Q Consensus 290 P~~Lp~~~~i~~~~~~~~l~~----------~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~ 359 (875)
|.+|++.+.+...+.+..+.. ..+.+|+.+..|+||++++|++|||||||+|.|++.+|.+....++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 999999999999888754432 4688999999999999999999999999999999999886432211110
Q ss_pred --------------------------------------------HHHHHHHHHhcc-------------ccccChHHHHH
Q 002832 360 --------------------------------------------DAVVLMAARASR-------------VENQDAIDAAI 382 (875)
Q Consensus 360 --------------------------------------------~~~l~~~~~~~~-------------~~~~~~~~~ai 382 (875)
.+.....+.|.. .+...|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 011222222221 11235778888
Q ss_pred HHhcCCh----------------HHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhcc-CChHHHH
Q 002832 383 VGMLADP----------------KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVR-NKSEIER 445 (875)
Q Consensus 383 ~~~~~~~----------------~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~-~~~~~~~ 445 (875)
+..+++. ......|+.++..+|+|.||||||++++++|+..+|||||+.+|.+++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 7754321 0113578999999999999999999999999999999999999999998 4556677
Q ss_pred HHHHHHHHHHhcCCeEEEEEEEecCCCC-------------------------cCCCCCCeeEEEEeccCCCCCCChHHH
Q 002832 446 RVHAIIDKFAERGLRSLAVAYQEVPDGR-------------------------KESSGGPWQFIGLMPLFDPPRHDSAET 500 (875)
Q Consensus 446 ~~~~~~~~~~~~G~rvl~~A~~~~~~~~-------------------------~~~~e~~l~~lG~i~~~D~lr~~~~~~ 500 (875)
.-.+.+++|+.+|+|+|++|||.+++++ .+.+|+||+++|..++||+++++++++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 7888999999999999999999998654 134799999999999999999999999
Q ss_pred HHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccc---------------------------------------
Q 002832 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL--------------------------------------- 541 (875)
Q Consensus 501 I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~--------------------------------------- 541 (875)
|+.|++||||+||+|||+.+||.+||..|++..+......+
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 99999999999999999999999999999997654322111
Q ss_pred ------ccccccccCCccc---HHHHhh--hCcEEEEeCHHHHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 542 ------LGQNKDESIVALP---VDELIE--KADGFAGVFPEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 542 ------~~~~~~~~~~~~~---~~~~~~--~~~vfar~sP~~K~~iV~~lq~~-g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
+|+.+...+++.+ +-++.. +..++||+||.||+.+|+..++. +.+++.+|||+||.+|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 1111111111111 112222 23489999999999999999754 88999999999999999999999999
Q ss_pred c--CccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcC----HHHHHHH
Q 002832 610 A--DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFP----PFMVLII 683 (875)
Q Consensus 610 g--~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~----~~~~l~~ 683 (875)
+ +|.+++. +||+.+.+..|..-.-+ .+||+.|.|+.+.+.|.+++|+...+..+.+.++.++... ++++.+.
T Consensus 820 sG~EGmQAvm-sSD~AIaqFrfL~rLLL-VHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQFRFLERLLL-VHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhhh-cccchHHHHHHHhhhhe-eecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 5 8888887 99999988776664443 4699999999999999999999998888888887776544 4444444
Q ss_pred HHhh-cccccccc-CCCCCCC------C---C---CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCccccccc
Q 002832 684 AILN-DGTIMTIS-KDRVKPS------P---L---PDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSS 749 (875)
Q Consensus 684 ~~~~-~~~~~~l~-~~~~~~~------~---~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (875)
|++. .++++.++ +|+..+. | + .......+.|+.+++.|++.+++.|++.+..+..... ..-|
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~-~~~G--- 973 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAV-TSNG--- 973 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeee-ccCC---
Confidence 4443 34456665 4543221 1 1 1122234677888899999999888776665532100 0011
Q ss_pred CCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccCchHHHHHHHHHHHHHHHHHHHhhc--c---------ccc
Q 002832 750 LHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVYAN--W---------SFA 818 (875)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~---------~~~ 818 (875)
. .. ++..++++++..+++..++. ...-+.+|.|+++-.+|..+++-+.+. .+|.. + ++.
T Consensus 974 ~---~~-d~~~~G~~~~T~~Vivv~~~-iaL~~~ywT~i~~i~i~gSi~~~f~f~-----~iy~~~~~~~~~~~~~~~~~ 1043 (1151)
T KOG0206|consen 974 L---TA-DYWTLGTTVFTIIVIVVNLK-IALETSYWTWINHIVIWGSILLWFVFL-----FIYSELTPAISTPDPFYGVA 1043 (1151)
T ss_pred C---cC-ChhhccceEEEEEEEEEEee-eeeeehheeHHHHHHHHHHHHHHHHHH-----HHHhccccccCCCccHHHHH
Confidence 1 11 11123334333322222221 122234555554433333332222111 11210 0 111
Q ss_pred ccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhHHhhh
Q 002832 819 AIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQR 865 (875)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~~~ 865 (875)
.....+..+|+.+++.++++++++..+|.+.+.++|...+..++.++
T Consensus 1044 ~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~ 1090 (1151)
T KOG0206|consen 1044 EHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEK 1090 (1151)
T ss_pred HHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHh
Confidence 12223445788889999999999999999999999988887776553
No 31
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-76 Score=646.26 Aligned_cols=769 Identities=21% Similarity=0.250 Sum_probs=526.2
Q ss_pred HHHHhcCCCccccccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCC-chhhHHHHHHHHHHHHHHHHHHH
Q 002832 44 ERLTIFGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPP-DWQDFVGIVTLLLINSTISFIEE 118 (875)
Q Consensus 44 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~-~~~~~~~ii~~i~~~~~~~~~~e 118 (875)
.++++|-+|.+...|++.+ ..+++||..+++.++++.++.+++.....+... +|...+.++.+.++-..++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888999988876643 456788888888888888887776654443322 33344444444455555566666
Q ss_pred HHHHHHHHHHhhccCCcEEEE-ECCeEEEEecCCcCCCcEEEEecCCccccceEEEecC----CeeeeccccCCCCeeee
Q 002832 119 NNAGNAAAALMASLAPKSKVL-RDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGD----PLKIDQSALTGESLPVT 193 (875)
Q Consensus 119 ~~~~~~~~~l~~~~~~~~~V~-rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~----~l~VdeS~LTGEs~pv~ 193 (875)
+++++. .+++..+++ |||...+ +++++++||+|.++.+++||||.++++.+ .+.+-+-.|+||+..+.
T Consensus 154 ~~rd~~------~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDRE------LNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhhh------hhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 655543 233455555 7776555 99999999999999999999999999744 25799999999997766
Q ss_pred cCC-----------------------------------------------CCceeecceeccCceeEEEEEecchhhhhh
Q 002832 194 KGP-----------------------------------------------GDSVYSGSTCKQGEIEAVVIATGVHTFFGK 226 (875)
Q Consensus 194 K~~-----------------------------------------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~ 226 (875)
|-| +|.++++|.+.+|.+.|+|++||.+|..
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 532 3679999999999999999999999963
Q ss_pred hhhhhccc---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHH
Q 002832 227 AAHLVDST---NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (875)
Q Consensus 227 i~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~ 303 (875)
.++.. .+...++..+|.+.+.+++...+..++ ++.....+..|...+.+++.++...||.+|-+.+.++..+
T Consensus 305 ---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 305 ---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred ---HhccCCcccccceeeeecccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 23322 455678888999988876554433332 2222334577888899999999999999999999999999
Q ss_pred HHHHHHhc----CCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCCh-H------------------
Q 002832 304 GSHRLSLQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDA-D------------------ 360 (875)
Q Consensus 304 ~~~~l~~~----~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~-~------------------ 360 (875)
.++.+.+. |..+|+.+.-|+||+++++.+|||||||+|+|.+++++......+.+. +
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 88888764 578999999999999999999999999999999999775432211110 0
Q ss_pred ---------------HHHHHHHHhccc----c--------ccChHHHHHHHhc-----------------CChHHHhhcc
Q 002832 361 ---------------AVVLMAARASRV----E--------NQDAIDAAIVGML-----------------ADPKEARANI 396 (875)
Q Consensus 361 ---------------~~l~~~~~~~~~----~--------~~~~~~~ai~~~~-----------------~~~~~~~~~~ 396 (875)
+.....+.|... + ..+|.+.|+++.- ..+.....+|
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~y 539 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNY 539 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeE
Confidence 111112222111 0 1234444443321 1111223479
Q ss_pred cEEEEecCCCCCceEEEEEEcC-CCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcC
Q 002832 397 QEVHFLPFNPTDKRTALTYIDS-EGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKE 475 (875)
Q Consensus 397 ~~l~~~pf~~~~k~~sv~~~~~-~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~ 475 (875)
+++..+||+|++|||+.+++++ .++...|.|||+-+|......+ +.+++....|+++|+|++.+|.|.+++.+++
T Consensus 540 qIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N----dWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 540 QILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN----DWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc----hhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 9999999999999999999975 6888999999999998877653 4667778899999999999999999865421
Q ss_pred --------------------------CCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh
Q 002832 476 --------------------------SSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (875)
Q Consensus 476 --------------------------~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (875)
..|+||.++|+.|.||+++++++.+++.||+||||+||+|||+.+||..||+..
T Consensus 616 ~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs 695 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS 695 (1051)
T ss_pred HHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc
Confidence 358899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC--------------------------CcccccccccccCC--cccHHHHhhh--CcEEEEeCHHHHHHHHHH
Q 002832 530 GMGTNMYP--------------------------SSALLGQNKDESIV--ALPVDELIEK--ADGFAGVFPEHKYEIVKR 579 (875)
Q Consensus 530 Gi~~~~~~--------------------------~~~~~~~~~~~~~~--~~~~~~~~~~--~~vfar~sP~~K~~iV~~ 579 (875)
++...... ..++.|++++-.+. ..|+-++..+ ..|+|||+|+||+++++.
T Consensus 696 ~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~l 775 (1051)
T KOG0210|consen 696 RLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRL 775 (1051)
T ss_pred cceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHH
Confidence 98653321 12233333221111 1233344333 348999999999999999
Q ss_pred HhhC-CCEEEEEcCCccCHHHHhhCCceEEe-c-CccHHHhhccCEEecCCChhHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 002832 580 LQAR-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVLT-SRAIFQRMKNYTIYAVS 655 (875)
Q Consensus 580 lq~~-g~~Vam~GDG~NDapALk~AdVGIam-g-~gtd~ak~aADivL~~~~~~~i~~~i~~-gR~~~~~i~~~i~~~l~ 655 (875)
+|+. |..|+.+|||.||+.|+++||+||++ | +|.+++. |||+.+.+ |+.+-+++.| ||+.|+|-.+.-+|.+-
T Consensus 776 lq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL-AADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViH 852 (1051)
T KOG0210|consen 776 LQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL-AADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIH 852 (1051)
T ss_pred HHHhhCceEEEEcCCCccchheeecccceeeecccccccch-hccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHh
Confidence 9986 89999999999999999999999998 5 7877666 99999976 9999988865 99999999998888776
Q ss_pred HHHHHHHHHHHHHH-hhcCCcCHH----HHHHHHHhhccccccccCCCCCCCC------------CCCchhhHHHHHHHH
Q 002832 656 ITIRIVLGFMLLAL-IWKFDFPPF----MVLIIAILNDGTIMTISKDRVKPSP------------LPDSWKLAEIFTTGV 718 (875)
Q Consensus 656 ~ni~~~~~~~~~~~-~~~~~~~~~----~~l~~~~~~~~~~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~ 718 (875)
....+..+...+.. ++-.|.+-+ ++.+..+.+-++.+++..|+.-.+. ...+....+-|..|+
T Consensus 853 RGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwv 932 (1051)
T KOG0210|consen 853 RGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWV 932 (1051)
T ss_pred hhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhh
Confidence 55443322222211 111122222 2333344444445677766542211 112222334566667
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcCCcccccccCCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccCchHHHHHH
Q 002832 719 ILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLA 798 (875)
Q Consensus 719 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~ 798 (875)
++.++++.+....+++.....+. ...++.|+.+++..+.+.....++|.| .++++
T Consensus 933 LISiYQG~vim~g~~~l~~~ef~-------------------~ivaisFtaLi~tELiMVaLtv~tw~~------~m~va 987 (1051)
T KOG0210|consen 933 LISIYQGSVIMYGALLLFDTEFI-------------------HIVAISFTALILTELIMVALTVRTWHW------LMVVA 987 (1051)
T ss_pred hHHHHcccHHHHHHHHHhhhhhe-------------------EeeeeeeHHHHHHHHHHHhhhhhhhhH------HHHHH
Confidence 77777776655443333321110 112334444455555333332333422 23333
Q ss_pred HHHHHHHH-HHHHHhhcccccc-cCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhh
Q 002832 799 FAVAQLIA-TLIAVYANWSFAA-IEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDL 860 (875)
Q Consensus 799 ~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~ 860 (875)
-++.+.+. ..+++... ++. -.-.+|.+++.+.++.++..++....|+++|++-||.+.++
T Consensus 988 e~lsL~~Yivsl~~l~~--yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl 1049 (1051)
T KOG0210|consen 988 ELLSLALYIVSLAFLHE--YFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAKL 1049 (1051)
T ss_pred HHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhc
Confidence 23222111 11122111 111 11244556666777888888888999999999999887654
No 32
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-75 Score=649.53 Aligned_cols=571 Identities=23% Similarity=0.288 Sum_probs=419.2
Q ss_pred CHHHHHHHcCCCCCCCC-HHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhH
Q 002832 22 PMEEVFETLRCNKEGLS-TEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDF 100 (875)
Q Consensus 22 ~~~~~~~~l~~~~~GL~-~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~ 100 (875)
+.++.+..++.+ +|+. ++|++.-.++||.|+...+.+++-..|.+.-..|| ++|++..+..|.+. ..|+..
T Consensus 149 p~~~~~g~~~k~-~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCLD------eyWYyS 220 (1160)
T KOG0209|consen 149 PTDEPFGYFQKS-TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCLD------EYWYYS 220 (1160)
T ss_pred CcCCcchhhhhc-cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHhH------HHHHHH
Confidence 344444444433 4665 34444555569999999988888888888888898 56666666666664 367766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cCCcEEEEECCeEEEEecCCcCCCcEEEEec---CCccccceEEEec
Q 002832 101 VGIVTLLLINSTISFIEENNAGNAAAALMAS--LAPKSKVLRDGKWMEEDAAILVPGDIISVKL---GDIIPADARLLEG 175 (875)
Q Consensus 101 ~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~--~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~---G~~vPaD~~ll~g 175 (875)
+.-+++++....--..|+.+ .+..++++ -+..+.|.|+++|+.+.++||.|||+|.+.. ...||||.+|+.|
T Consensus 221 lFtLfMli~fE~tlV~Qrm~---~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G 297 (1160)
T KOG0209|consen 221 LFTLFMLIAFEATLVKQRMR---TLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG 297 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec
Confidence 66555554433333344443 34444444 3456889999999999999999999999987 5679999999999
Q ss_pred CCeeeeccccCCCCeeeecCC-----------------CCceeecceecc-------------CceeEEEEEecchhhhh
Q 002832 176 DPLKIDQSALTGESLPVTKGP-----------------GDSVYSGSTCKQ-------------GEIEAVVIATGVHTFFG 225 (875)
Q Consensus 176 ~~l~VdeS~LTGEs~pv~K~~-----------------~~~v~~Gt~v~~-------------G~~~~~V~~tG~~T~~g 225 (875)
++ .|||++|||||.|..|.+ ...+|.||.+++ |.+.+.|++||.+|..|
T Consensus 298 sc-iVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQG 376 (1160)
T KOG0209|consen 298 SC-IVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQG 376 (1160)
T ss_pred ce-eechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCC
Confidence 97 599999999999999976 136999999864 67999999999999999
Q ss_pred hhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc----CCchhhHHHHHHHHHHhcCCchHHHHHHH
Q 002832 226 KAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQH----RKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300 (875)
Q Consensus 226 ~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~llv~~iP~~Lp~~~~i~ 300 (875)
++.+.+-.. ++.+.-.+.. + +++.++.+++++.....|.-.. ++-...+..+..++...+|+.||+-++++
T Consensus 377 kLvRtilf~aervTaNn~Et--f--~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmA 452 (1160)
T KOG0209|consen 377 KLVRTILFSAERVTANNRET--F--IFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMA 452 (1160)
T ss_pred ceeeeEEecceeeeeccHHH--H--HHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHH
Confidence 987766543 3333222211 1 1111111111111111111111 12223345556677888999999999999
Q ss_pred HHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccC-------CCChHHHHHHHHHhc--c
Q 002832 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAK-------GVDADAVVLMAARAS--R 371 (875)
Q Consensus 301 ~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~-------~~~~~~~l~~~~~~~--~ 371 (875)
.-.+...++|.+++|..+-.+.-.|++|+.|||||||||+..|.|..+--..... ....+.+..+|.+.+ .
T Consensus 453 VNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~ 532 (1160)
T KOG0209|consen 453 VNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVL 532 (1160)
T ss_pred HHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999997643100000 111223333332222 1
Q ss_pred c---cccChHHHHHHHhcCChHHH----------hhcccEEEEecCCCCCceEEEEEEcC----CCeEEEEEcCcHHHHH
Q 002832 372 V---ENQDAIDAAIVGMLADPKEA----------RANIQEVHFLPFNPTDKRTALTYIDS----EGKMHRVSKGAPEQIL 434 (875)
Q Consensus 372 ~---~~~~~~~~ai~~~~~~~~~~----------~~~~~~l~~~pf~~~~k~~sv~~~~~----~g~~~~~~KGa~e~i~ 434 (875)
. --+||+++|.+...+..-+. ....++.+.+.|+|.-|||+++.... +-+++..+|||||.|.
T Consensus 533 le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~ 612 (1160)
T KOG0209|consen 533 LEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQ 612 (1160)
T ss_pred hcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHH
Confidence 2 34799999998876422111 11356678899999999999987532 2367888999999999
Q ss_pred HhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCC--------CCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHh
Q 002832 435 NLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPD--------GRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALN 506 (875)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~--------~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ 506 (875)
++.. +.++++++...+++++|.||+|++||+++. ..+++.|+||+|.|++.|.-|+|+|++++|++|++
T Consensus 613 ~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~ 689 (1160)
T KOG0209|consen 613 EMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNN 689 (1160)
T ss_pred HHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhc
Confidence 8875 457788888999999999999999999873 23678899999999999999999999999999999
Q ss_pred CCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC---------------------------------------ccccccccc
Q 002832 507 LGVNVKMITGDQLAIAKETGRRLGMGTNMYPS---------------------------------------SALLGQNKD 547 (875)
Q Consensus 507 aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~---------------------------------------~~~~~~~~~ 547 (875)
++.+++||||||+.||.++|+++||..+.... ..++|..++
T Consensus 690 SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~ 769 (1160)
T KOG0209|consen 690 SSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALD 769 (1160)
T ss_pred cCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHH
Confidence 99999999999999999999999996541100 011222222
Q ss_pred ccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecC
Q 002832 548 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (875)
Q Consensus 548 ~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~ 611 (875)
.-.....+.+++..+.||||+.|.||..++..|++.|+.++|||||+||+.|||+||||||+-+
T Consensus 770 ~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~ 833 (1160)
T KOG0209|consen 770 HLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLN 833 (1160)
T ss_pred HHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhc
Confidence 2122224556677788999999999999999999999999999999999999999999999853
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-66 Score=548.94 Aligned_cols=520 Identities=27% Similarity=0.379 Sum_probs=401.6
Q ss_pred HHhHHHHHHHHHHHHHHHHH----hCCCCCCchhhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhcc-CCcEEEE
Q 002832 69 MWNPLSWVMEAAAIMAIALA----NGGGKPPDWQDFVGIVTLL----LINSTISFIEENNAGNAAAALMASL-APKSKVL 139 (875)
Q Consensus 69 ~~~~~~~~l~~~~il~~~~~----~~~~~~~~~~~~~~ii~~i----~~~~~~~~~~e~~~~~~~~~l~~~~-~~~~~V~ 139 (875)
.+||..++.++.++++.++. ..++...++.....+.+++ ++..+.+.+.|-|.+...++|++.. ...++++
T Consensus 30 ~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l 109 (681)
T COG2216 30 VKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLL 109 (681)
T ss_pred hhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHh
Confidence 46787777666666665322 2222112222222222222 3334445555655555556665432 3357777
Q ss_pred EC-CeEEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCC---CceeecceeccCceeEEE
Q 002832 140 RD-GKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DSVYSGSTCKQGEIEAVV 215 (875)
Q Consensus 140 rd-g~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~---~~v~~Gt~v~~G~~~~~V 215 (875)
++ |.++.+++.+|+.||+|.+++||.||+||.+++|.+ +||||++||||.||-|.+| +.|-.||.+.+.+.+..+
T Consensus 110 ~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~iri 188 (681)
T COG2216 110 RADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRI 188 (681)
T ss_pred cCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEEE
Confidence 75 899999999999999999999999999999999997 8999999999999999998 679999999999999999
Q ss_pred EEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCch
Q 002832 216 IATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFC-ICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAM 293 (875)
Q Consensus 216 ~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L 293 (875)
++.-.+|.+.|+..+++.+ .+++|-+--++-+..-+ +++++....+..+..|.. .-...+...++++++.+|-..
T Consensus 189 ta~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a~y~~---g~~~~i~~LiALlV~LIPTTI 265 (681)
T COG2216 189 TANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPFAIYSG---GGAASVTVLVALLVCLIPTTI 265 (681)
T ss_pred EcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhhHHHHcC---CCCcCHHHHHHHHHHHhcccH
Confidence 9999999999999999988 66788666554432111 111111111111111111 112345677889999999988
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhcccc
Q 002832 294 PTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVE 373 (875)
Q Consensus 294 p~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 373 (875)
.--++..--.|+.|+.+.|++-++..++|..|.+|++..|||||+|-|+=.-.++. ...+.+.+++...|..++...
T Consensus 266 GgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl~D 342 (681)
T COG2216 266 GGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASLAD 342 (681)
T ss_pred HHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhhcc
Confidence 77777666678999999999999999999999999999999999999865444432 235788888888777766443
Q ss_pred ccChHHHHHHHhcCChH-HHh-hccc-EEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCCh-HHHHHHHH
Q 002832 374 NQDAIDAAIVGMLADPK-EAR-ANIQ-EVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKS-EIERRVHA 449 (875)
Q Consensus 374 ~~~~~~~ai~~~~~~~~-~~~-~~~~-~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~-~~~~~~~~ 449 (875)
+.|..++++..+++.. +.+ .... ..+++||+.+.+++++-. +++ ..+.|||.+.+.+...... ..++++++
T Consensus 343 -eTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~ 417 (681)
T COG2216 343 -ETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDA 417 (681)
T ss_pred -CCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHH
Confidence 3355566665543221 111 1111 357899999887666543 233 4578999999999876432 36778889
Q ss_pred HHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh
Q 002832 450 IIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (875)
Q Consensus 450 ~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (875)
..++.++.|-..++++... +++|.+.++|-+||+.+|-+.+||++|||++|+||||+.||..||++.
T Consensus 418 ~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA 484 (681)
T COG2216 418 AVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 484 (681)
T ss_pred HHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh
Confidence 9999999999999999866 899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 530 GMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 530 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
|+++ ..|+++||+|.++|+.-|.+|+.|||||||.||+|||.+||||+||
T Consensus 485 GVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM 534 (681)
T COG2216 485 GVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 534 (681)
T ss_pred Cchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh
Confidence 9852 4799999999999999999999999999999999999999999999
Q ss_pred cCccHHHhhccCEEecCCChhHHHHHHHHHHHHH
Q 002832 610 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 643 (875)
Q Consensus 610 g~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~ 643 (875)
.+||++||||+.+|=+|.|...+.+.++.|++..
T Consensus 535 NsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 535 NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred ccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 9999999999999999999999999999999863
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.4e-35 Score=311.54 Aligned_cols=220 Identities=36% Similarity=0.530 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCc-EEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEe-cCCeee
Q 002832 103 IVTLLLINSTISFIEENNAGNAAAALMASLAPK-SKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLE-GDPLKI 180 (875)
Q Consensus 103 ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~-~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~-g~~l~V 180 (875)
++++++++.++++++++|+++..+++++..+++ ++|+|||++++++++||+|||+|+|++||++||||++++ |. +.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~-~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS-AYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE-EEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccc-ccc
Confidence 566778889999999999999999999888887 999999999999999999999999999999999999999 65 689
Q ss_pred eccccCCCCeeeecC-----CCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 002832 181 DQSALTGESLPVTKG-----PGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICS 254 (875)
Q Consensus 181 deS~LTGEs~pv~K~-----~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (875)
|||.+|||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|..|++.+..... .+++++++.++++..++..+
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 999999999999999999999999999999999988776 45689999999998886554
Q ss_pred HHHHHHHHHHHhhh-cccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhh
Q 002832 255 IAVGMIVEIIVMYP-IQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEE 323 (875)
Q Consensus 255 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~ 323 (875)
+++..++.+++++. ....+|...+..+++++++++|++||+++++++..++++|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 44333333332222 2556778889999999999999999999999999999999999999999999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.93 E-value=1.3e-26 Score=240.40 Aligned_cols=211 Identities=32% Similarity=0.437 Sum_probs=149.4
Q ss_pred ceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCC
Q 002832 327 MDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNP 406 (875)
Q Consensus 327 v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~ 406 (875)
|++||||||||||+|+|.+. . .....++..+... ...+.||+..++.......... .... +|..
T Consensus 1 i~~i~fDktGTLt~~~~~v~-----~----~~~~~~~~~~~~~-~~~s~~p~~~~~~~~~~~~~~~-~~~~-----~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVA-----P----PSNEAALAIAAAL-EQGSEHPIGKAIVEFAKNHQWS-KSLE-----SFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEEE-----S----CSHHHHHHHHHHH-HCTSTSHHHHHHHHHHHHHHHH-SCCE-----EEEE
T ss_pred CeEEEEecCCCcccCeEEEE-----e----ccHHHHHHHHHHh-hhcCCCcchhhhhhhhhhccch-hhhh-----hhee
Confidence 68999999999999999981 1 3344455554333 3345679998887765432211 1111 1111
Q ss_pred CCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEE
Q 002832 407 TDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGL 486 (875)
Q Consensus 407 ~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~ 486 (875)
...+...... ++. +. |+++.+.+..... ............+|.+.+.++. ++.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 1111111111 112 22 8888887754321 1111122233556666666664 3489999
Q ss_pred eccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEE
Q 002832 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (875)
Q Consensus 487 i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfa 566 (875)
+.+.|++||+++++|++|+++|++++|+|||+..+|.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 13799
Q ss_pred Ee--CHHHH--HHHHHHHhhCCCEEEEEcCCccCHHHHhhCC
Q 002832 567 GV--FPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (875)
Q Consensus 567 r~--sP~~K--~~iV~~lq~~g~~Vam~GDG~NDapALk~Ad 604 (875)
++ +|++| .++++.||.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.64 E-value=1e-15 Score=136.83 Aligned_cols=123 Identities=26% Similarity=0.395 Sum_probs=107.9
Q ss_pred eEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhh
Q 002832 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEK 561 (875)
Q Consensus 482 ~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (875)
...+.++---++=++++++|++|++. +++++.|||...+-.+.|+-+|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 46777777888899999999999999 99999999999999999999998643
Q ss_pred CcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe-c--CccHHHhhccCEEecCCChhHHHHH
Q 002832 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 562 ~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam-g--~gtd~ak~aADivL~~~~~~~i~~~ 635 (875)
++||...|+.|.++++.|++++++|.|+|||.||.+||++||+||.. + ...+-+.++||+++-+ ...+++.
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 57999999999999999999999999999999999999999999986 4 4567778999999854 4444443
No 37
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.43 E-value=2.7e-13 Score=113.37 Aligned_cols=67 Identities=36% Similarity=0.496 Sum_probs=60.9
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccc-ccccHHHHHHHHHHhHHHHHHHHHHHHH
Q 002832 18 LENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEE-KQESKILKFLGFMWNPLSWVMEAAAIMA 84 (875)
Q Consensus 18 ~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~-~~~~~~~~~~~~~~~~~~~~l~~~~il~ 84 (875)
||.++.++++++|+++ .+|||++||++|+++||+|+++. ++++.|..|+++|.+|+.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 8999999999999966 78999999999999999999965 5578888999999999999999999886
No 38
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.31 E-value=1.8e-09 Score=120.22 Aligned_cols=208 Identities=18% Similarity=0.211 Sum_probs=144.7
Q ss_pred eeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccc----------------
Q 002832 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ---------------- 544 (875)
Q Consensus 481 l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~---------------- 544 (875)
-.|.|++....+.|++....|+.|-++-||.+-.|-.+....+-.|+++||.........+..+
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 3689999999999999999999999999999999999999999999999996432211111100
Q ss_pred ---------------------cccc-----------cC--------CcccHHHH----------hh-------hCcEEEE
Q 002832 545 ---------------------NKDE-----------SI--------VALPVDEL----------IE-------KADGFAG 567 (875)
Q Consensus 545 ---------------------~~~~-----------~~--------~~~~~~~~----------~~-------~~~vfar 567 (875)
.++. .+ ++....++ ++ -+..|..
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 0000 00 00001110 01 1226889
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCCccCHH--HHhhCCceEEecC-------------ccHH--Hh-------------
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAP--ALKKADIGIAVAD-------------ATDA--AR------------- 617 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG~NDap--ALk~AdVGIamg~-------------gtd~--ak------------- 617 (875)
++|+.-.++++.+|++|++|+.+|.-.|-.. -.-+||++|++.. ++.. |+
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 9999999999999999999999999988543 4568999998852 1111 11
Q ss_pred ---hccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcCCcCHHHHHHHHHhhc
Q 002832 618 ---SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL-ALIWKFDFPPFMVLIIAILND 688 (875)
Q Consensus 618 ---~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~ 688 (875)
-++|+-+-...+-+|..+|+-.|....-+|+..+|.+.......+..++. +++.|..++.-+++|...+--
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~ 1129 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCI 1129 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHH
Confidence 12333343444567788889999999999999999998887655444443 334566677777888877653
No 39
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.25 E-value=9.8e-11 Score=118.26 Aligned_cols=167 Identities=17% Similarity=0.195 Sum_probs=107.4
Q ss_pred cCCcCHHHHHHHHHhhccc-cccccCCCCCC------CCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCc
Q 002832 672 KFDFPPFMVLIIAILNDGT-IMTISKDRVKP------SPLPDS-WKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPR 743 (875)
Q Consensus 672 ~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~------~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 743 (875)
|.|++|+|+||+|+++|.+ ++++++|++++ |++++. ...++++...+..|+++++.+++.|++..+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 4689999999999999998 69999988643 222333 2335678888899999999999888777642
Q ss_pred ccccccCCccchhhHHhHHHHHHHHHHHHHHH-HHHHHhcCCCcccc--C--chHHHHHHHHHHHHHHHHHHHhhc--cc
Q 002832 744 TFGVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARSWSFVD--R--PGLLLVLAFAVAQLIATLIAVYAN--WS 816 (875)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~--~--~~~~l~~~~~~~~~~~~~~~~~~~--~~ 816 (875)
+|......+.. ...+++++|...+++|+ +.+++|+++.+.+. + .|.+++.++++..++..+ ..|.+ -.
T Consensus 76 -~~~~~~~~~~~---~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~-i~~~P~~~~ 150 (182)
T PF00689_consen 76 -FGWDEETNNDN---LAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQIL-IVYVPGLNR 150 (182)
T ss_dssp -TCSSSHHHTTC---HHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHH-HHHSTTHHH
T ss_pred -cccccccchhH---HHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHH-HhcchhhHh
Confidence 11110000000 13467888888888886 67899996654333 2 356666665554433333 33332 22
Q ss_pred ccccCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 817 FAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFF 848 (875)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 848 (875)
.+.+.++++..|+.+++.+++.+++.|++|++
T Consensus 151 ~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 151 IFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 35677888888888999999999999999975
No 40
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.10 E-value=1.8e-10 Score=94.78 Aligned_cols=59 Identities=37% Similarity=0.593 Sum_probs=53.1
Q ss_pred HcCCCC-CCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 002832 29 TLRCNK-EGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIAL 87 (875)
Q Consensus 29 ~l~~~~-~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~ 87 (875)
.++++. +|||++|+++|+++||+|+++.++ .+.|+.++++|++|+.++|++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 466774 499999999999999999998875 77888999999999999999999999876
No 41
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.02 E-value=2e-09 Score=110.19 Aligned_cols=131 Identities=15% Similarity=0.150 Sum_probs=97.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
+++|++.+.|+.+|+.| ++.++||-....+..+++++|+... ........+. ..+.. ..-..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~-~an~l~~~~~--g~~tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDDS--DRVVG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchh-hceeeEEecC--CeeEC------------eeecCcc
Confidence 68999999999999975 9999999999999999999999531 1111100000 00000 0013578
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~g 639 (875)
+|...++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-... +.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~-~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH-TYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCccc-CHHHHHHHHHHH
Confidence 9999999999888889999999999999999999999987666666666655543 477777777654
No 42
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.92 E-value=4.9e-09 Score=114.51 Aligned_cols=131 Identities=20% Similarity=0.279 Sum_probs=98.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEE-EeCH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA-GVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfa-r~sP 570 (875)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.........+. +..+.. .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~----dg~ltg----------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIM----DGKLTG----------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEE----CCEEEe----------EecCccCCc
Confidence 689999999999999999999999999888889999999842100000000 000000 0000 0234
Q ss_pred HHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
+.|.+.++.+.++ | +.+.++|||.||.+|++.|++|||| ++.+..++.||.++...++..+...+-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888887654 3 5689999999999999999999999 888999999999999889998887653
No 43
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.89 E-value=7.1e-09 Score=107.94 Aligned_cols=129 Identities=22% Similarity=0.278 Sum_probs=93.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE-eCH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG-VFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar-~sP 570 (875)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+..- ........ +..... .+.++ ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE---CCEEEE----------EecCcccCC
Confidence 6899999999999999999999999999999999999998531 10000000 000000 00011 123
Q ss_pred HHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHH
Q 002832 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~ 635 (875)
..|..+++.+.++ | +.+.|+||+.||.+|+++|+++++++ +.+..+++||.++.+++|..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 3467777765544 2 35889999999999999999999985 567888999999999999887653
No 44
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.80 E-value=9.4e-09 Score=90.76 Aligned_cols=66 Identities=29% Similarity=0.392 Sum_probs=53.8
Q ss_pred cccChHHHHHHHhcCC------hHHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC
Q 002832 373 ENQDAIDAAIVGMLAD------PKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN 439 (875)
Q Consensus 373 ~~~~~~~~ai~~~~~~------~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~ 439 (875)
..++|.|.|++.+... ....+..+++++.+||+|++|||+++++ .++.+++++|||||.|+++|+.
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 3567888888876532 3456778999999999999999999998 3345777999999999999974
No 45
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.77 E-value=4e-08 Score=103.14 Aligned_cols=153 Identities=24% Similarity=0.271 Sum_probs=104.3
Q ss_pred EEeccCCC-CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--CCc-ccc---ccc-----cc-----
Q 002832 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSS-ALL---GQN-----KD----- 547 (875)
Q Consensus 485 G~i~~~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~-~~~---~~~-----~~----- 547 (875)
|.+.-.|+ +.|.+.++|+++++.|+++++.||.+...+..+.+++|+..... ... +.. ++. .+
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 77899999999999999999999999999999999999853211 000 000 000 00
Q ss_pred -------------------cc--------CCc---ccHHHHhhhCc--E-------EEEeCHHH--HHHHHHHHhhC-C-
Q 002832 548 -------------------ES--------IVA---LPVDELIEKAD--G-------FAGVFPEH--KYEIVKRLQAR-K- 584 (875)
Q Consensus 548 -------------------~~--------~~~---~~~~~~~~~~~--v-------far~sP~~--K~~iV~~lq~~-g- 584 (875)
.. ... ++..+.+++.. + +....|.. |..-++.+.+. |
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00 000 11222222211 1 12444433 77777777554 2
Q ss_pred --CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 585 --HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 585 --~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
..++++||+.||.+|++.|++|+||+++.+..|++||+|..+++=.++.++++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 45899999999999999999999999999999999999998888788887775
No 46
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.76 E-value=2.6e-08 Score=103.49 Aligned_cols=144 Identities=20% Similarity=0.274 Sum_probs=98.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC--Cccc-cc-cc------ccc-------------
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSAL-LG-QN------KDE------------- 548 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~~-~~-~~------~~~------------- 548 (875)
++-+++.++|++|++.|+++++.||.+...+..+++++++...... ...+ .. .. .+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4888999999999999999999999999999999999998532110 0000 00 00 000
Q ss_pred -----c---------CCc---ccHHHHhhhCc--E-----EEEeCH--HHHHHHHHHHhhC-C---CEEEEEcCCccCHH
Q 002832 549 -----S---------IVA---LPVDELIEKAD--G-----FAGVFP--EHKYEIVKRLQAR-K---HICGMTGDGVNDAP 598 (875)
Q Consensus 549 -----~---------~~~---~~~~~~~~~~~--v-----far~sP--~~K~~iV~~lq~~-g---~~Vam~GDG~NDap 598 (875)
. ... ..+.+.+++.. + +..++| .+|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 000 01111222211 1 123333 5788888877653 3 35899999999999
Q ss_pred HHhhCCceEEecCccHHHhhccCEEecCCChhHHHHH
Q 002832 599 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 599 ALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~ 635 (875)
|++.|+.|+||++|.+.+|+.||+|..+++-.++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999976666665543
No 47
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.75 E-value=3.8e-08 Score=97.27 Aligned_cols=100 Identities=19% Similarity=0.262 Sum_probs=81.4
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE--eCHHHHHHH
Q 002832 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG--VFPEHKYEI 576 (875)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar--~sP~~K~~i 576 (875)
.+|+.|++.|+++.++|+.+...+....+.+|+.. .|.. -.|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 57999999999999999999999999999999852 1111 124444555
Q ss_pred HHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCC
Q 002832 577 VKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (875)
Q Consensus 577 V~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~ 628 (875)
++.++-....++|+||+.||.+|++.|++++||+++.+..|+.||+|..+++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 5555444456999999999999999999999999999999999999986544
No 48
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.71 E-value=7.4e-08 Score=103.76 Aligned_cols=66 Identities=21% Similarity=0.204 Sum_probs=55.3
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.|..-++.+.+. | +.|+++|||.||.+||+.|++|+||++|++.+|++||+|..+++=.++..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 455555555443 3 45899999999999999999999999999999999999998888888887775
No 49
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.69 E-value=9.6e-08 Score=93.51 Aligned_cols=97 Identities=27% Similarity=0.403 Sum_probs=77.8
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHH
Q 002832 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (875)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 579 (875)
+|++|++.|+++.++||+....+..+.+++|+... |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 89999999999999999999999999999998521 1111 223444433
Q ss_pred H----hhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCC
Q 002832 580 L----QARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (875)
Q Consensus 580 l----q~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~ 628 (875)
+ .-..+.+.|+||+.||.+|++.|++++++.++.+..+..||+++..+.
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCC
Confidence 3 223457999999999999999999999999888999999999997554
No 50
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.69 E-value=1.4e-07 Score=101.35 Aligned_cols=154 Identities=21% Similarity=0.228 Sum_probs=107.2
Q ss_pred EEeccCCC-CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC---------Ccccccccccc------
Q 002832 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP---------SSALLGQNKDE------ 548 (875)
Q Consensus 485 G~i~~~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~---------~~~~~~~~~~~------ 548 (875)
|.+.-.|. +.+.++++|+++++.|+++.+.||.+...+..+.+++|+...... ...+....++.
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 899999999999999999999999999999999999998641100 00000000000
Q ss_pred -----------------------------------------------cCC----------cccHHHHh---hh-----Cc
Q 002832 549 -----------------------------------------------SIV----------ALPVDELI---EK-----AD 563 (875)
Q Consensus 549 -----------------------------------------------~~~----------~~~~~~~~---~~-----~~ 563 (875)
..+ ....++.. .+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 000 00111111 11 11
Q ss_pred EE-------EEeCH--HHHHHHHHHHhhC-CC---EEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChh
Q 002832 564 GF-------AGVFP--EHKYEIVKRLQAR-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 630 (875)
Q Consensus 564 vf-------ar~sP--~~K~~iV~~lq~~-g~---~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~ 630 (875)
.+ -...| .+|..-++.+.+. |- -|+++||+.||.+||+.|+.||||++|++.+|+.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 22 23333 3688888877763 54 399999999999999999999999999999999999888888888
Q ss_pred HHHHHHHH
Q 002832 631 VIISAVLT 638 (875)
Q Consensus 631 ~i~~~i~~ 638 (875)
++..+++.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 88888864
No 51
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.66 E-value=1.1e-07 Score=97.70 Aligned_cols=106 Identities=23% Similarity=0.205 Sum_probs=82.4
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCc-----ccccccccccCCcccHHHHhhhCcEE
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS-----ALLGQNKDESIVALPVDELIEKADGF 565 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~vf 565 (875)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+........ .++| ++.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG-------------------~v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTG-------------------RVV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEec-------------------eee
Confidence 5899999999999999999999999999999999999999964311100 1111 234
Q ss_pred EE-eCHHHHHHHHHHHhh-CCC---EEEEEcCCccCHHHHhhCCceEEecCccHH
Q 002832 566 AG-VFPEHKYEIVKRLQA-RKH---ICGMTGDGVNDAPALKKADIGIAVADATDA 615 (875)
Q Consensus 566 ar-~sP~~K~~iV~~lq~-~g~---~Vam~GDG~NDapALk~AdVGIamg~gtd~ 615 (875)
.+ +..+.|.+.++.+.+ .|. .+.++|||.||.|||+.|+.+++++.....
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l 191 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKL 191 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHH
Confidence 33 334789988866655 354 488999999999999999999999854443
No 52
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.62 E-value=1.8e-07 Score=97.69 Aligned_cols=145 Identities=23% Similarity=0.283 Sum_probs=98.4
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC--Cc-ccccc--------cccc------------
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SS-ALLGQ--------NKDE------------ 548 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~-~~~~~--------~~~~------------ 548 (875)
.+.+.+.++|+++++.|+++++.||.+...+..+.+++|+...... .. +.... ..+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999996421100 00 00000 0000
Q ss_pred -------c-------------CCcccHHHHhhhCc---------EEEEeCH--HHHHHHHHHHhhC-C---CEEEEEcCC
Q 002832 549 -------S-------------IVALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQAR-K---HICGMTGDG 593 (875)
Q Consensus 549 -------~-------------~~~~~~~~~~~~~~---------vfar~sP--~~K~~iV~~lq~~-g---~~Vam~GDG 593 (875)
. .+.+...++.++.. .+..+.| .+|..-++.+.+. | ..|.++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 00001111222111 1223334 4688878777653 3 468999999
Q ss_pred ccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhH----HHHHH
Q 002832 594 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAV 636 (875)
Q Consensus 594 ~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~----i~~~i 636 (875)
.||.+|++.|++|+||+++.+..|+.||.|..+++-.. +..++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999987776666 55444
No 53
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.59 E-value=1.8e-07 Score=100.87 Aligned_cols=66 Identities=18% Similarity=0.172 Sum_probs=54.8
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCE--EecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADi--vL~~~~~~~i~~~i~ 637 (875)
.|..-++.+.+. | ..|+++|||-||.+||+.|+.||||++|.+.+|++||. |..+++-.++..+|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 477777776554 3 45899999999999999999999999999999999996 666777777777764
No 54
>PRK10976 putative hydrolase; Provisional
Probab=98.58 E-value=2.4e-07 Score=99.49 Aligned_cols=66 Identities=20% Similarity=0.218 Sum_probs=53.6
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccC--EEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aAD--ivL~~~~~~~i~~~i~ 637 (875)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.|+||++|++.+|++|| .|..+++=.++..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 366666655443 3 4589999999999999999999999999999999988 6777777777777775
No 55
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.58 E-value=4.4e-07 Score=93.40 Aligned_cols=128 Identities=20% Similarity=0.201 Sum_probs=91.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++++.++.|+++ +++.++|+.....+..+.+++|+..-. . ..+...+ +..... +.-..|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~-~~~~~~~-~~~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-C-HSLEVDE-DGMITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-c-ceEEECC-CCeEEC------------ccccccc
Confidence 5689999999999999 999999999999999999999985211 0 0000000 000000 0012378
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
.|...++.++..+..+.|+|||.||.+|.++|++|+..+.+.+...+.++..+ -+++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~-~~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPA-VHTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCcccc-cCCHHHHHHHH
Confidence 89999999998889999999999999999999999998765555555566522 24466665544
No 56
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.51 E-value=3e-07 Score=92.81 Aligned_cols=108 Identities=23% Similarity=0.303 Sum_probs=82.7
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHH
Q 002832 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVK 578 (875)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~ 578 (875)
.+|+.|++.|+++.++||.....+..+++++|+..- |. ..++|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 699999999999999999999999999999998421 11 1133555444
Q ss_pred HH-hhCC---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCC----ChhHHHHHHHH
Q 002832 579 RL-QARK---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP----GLSVIISAVLT 638 (875)
Q Consensus 579 ~l-q~~g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~----~~~~i~~~i~~ 638 (875)
.+ ++.| ..|+|+||+.||.+|++.|+++++++++.+..+..||+++-.. .+..+.+.+..
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 43 3333 4699999999999999999999999988888899999998533 24445554543
No 57
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.48 E-value=8.6e-07 Score=95.50 Aligned_cols=66 Identities=23% Similarity=0.325 Sum_probs=54.8
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.|..-++.+.++ | +-|+++||+.||.+|++.|++|++||++.+..|+.||.|..+++=.++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466655544332 3 35899999999999999999999999999999999999998888888888775
No 58
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.47 E-value=7.5e-07 Score=94.22 Aligned_cols=143 Identities=18% Similarity=0.195 Sum_probs=99.4
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccc-------------cc---------
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNK-------------DE--------- 548 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~-------------~~--------- 548 (875)
..+-|++.+++++++++|+++++.||.....+..+..++++..... ..+|.-. +.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I---~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~ 90 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFI---CSNGALIDDPKGKILYEKPIDSDDVKKILKY 90 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEE---EGGGTEEEETTTEEEEEESB-HHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhc---ccccceeeecccccchhhheeccchhheeeh
Confidence 3477899999999999999999999999999999999999852110 0011000 00
Q ss_pred --------------------c------------------------------------CCcccHHH-------HhhhCcE-
Q 002832 549 --------------------S------------------------------------IVALPVDE-------LIEKADG- 564 (875)
Q Consensus 549 --------------------~------------------------------------~~~~~~~~-------~~~~~~v- 564 (875)
. .+.+.+++ .......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~ 170 (254)
T PF08282_consen 91 LKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDV 170 (254)
T ss_dssp HHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeE
Confidence 0 00001111 1111101
Q ss_pred ------EEEeCH--HHHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHH
Q 002832 565 ------FAGVFP--EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 632 (875)
Q Consensus 565 ------far~sP--~~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i 632 (875)
+-.++| ..|..-++.+.+. .+.+.++||+.||.+||+.|+.|+||+++++..|+.||.+....+=.++
T Consensus 171 ~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv 250 (254)
T PF08282_consen 171 VRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGV 250 (254)
T ss_dssp EEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHH
T ss_pred EEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChH
Confidence 223444 5688888877653 3568899999999999999999999999999999999999987766777
Q ss_pred HHHH
Q 002832 633 ISAV 636 (875)
Q Consensus 633 ~~~i 636 (875)
.++|
T Consensus 251 ~~~i 254 (254)
T PF08282_consen 251 AKAI 254 (254)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 6654
No 59
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.45 E-value=7e-07 Score=91.45 Aligned_cols=117 Identities=26% Similarity=0.354 Sum_probs=83.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+... ...... ..+ +... +-..+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~-~~~-~g~~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELV-FDE-KGFI----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEE-EcC-CCeE----------ecceeeEEccc
Confidence 5899999999999999999999999999999999999997421 111111 000 0000 00112234567
Q ss_pred HHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccC
Q 002832 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 621 (875)
Q Consensus 572 ~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aAD 621 (875)
.|...++.+.++ .+.+.|+||+.||.+|+++|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 787777766543 23589999999999999999999999865555666665
No 60
>PRK08238 hypothetical protein; Validated
Probab=98.45 E-value=0.00015 Score=83.74 Aligned_cols=101 Identities=16% Similarity=0.218 Sum_probs=75.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+ .++.+++ ..++.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-----~Vigsd~-------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-----GVFASDG-------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-----EEEeCCC-------------------ccccCCc
Confidence 588999999999999999999999999999999999999722 1221111 1135577
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHh
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak 617 (875)
.|.+.++.....+. +.++||..||.|+++.|+-.++++.+....+
T Consensus 128 ~K~~~l~~~l~~~~-~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGERG-FDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCccC-eeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 77665543322222 5688999999999999999999986554444
No 61
>PLN02887 hydrolase family protein
Probab=98.42 E-value=8.9e-07 Score=103.67 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=48.3
Q ss_pred EEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 586 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 586 ~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
-|+++|||.||.+||+.|+.|||||+|.+..|++||+|..+++=.++..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5889999999999999999999999999999999999998888888888775
No 62
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.35 E-value=2.7e-06 Score=88.20 Aligned_cols=135 Identities=12% Similarity=0.055 Sum_probs=87.5
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC-cccccccccccCCcccHHHHhhhCcEE---E
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS-SALLGQNKDESIVALPVDELIEKADGF---A 566 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vf---a 566 (875)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++........ ....+......... -..+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~---------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH---------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC---------CCcccccc
Confidence 378999999999999999999999999999888888887543221111 11111111100000 0000 0
Q ss_pred EeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHh--hccCEEecCCChhHHHHHHH
Q 002832 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 567 r~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak--~aADivL~~~~~~~i~~~i~ 637 (875)
.| ...|..+++.++...+.+.|+|||.||.+|++.||++++=+.-.+-.+ .-+.+.. ++|..+...++
T Consensus 140 ~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 140 QC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 11 246999999998888889999999999999999999887552112111 1122222 55777776654
No 63
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.34 E-value=1.8e-06 Score=92.16 Aligned_cols=64 Identities=23% Similarity=0.274 Sum_probs=54.1
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~ 635 (875)
.|..-++.+.+. | +.++++||+.||.+|++.|+.|++|+++++..|+.||++..+++-.++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 488777777654 2 469999999999999999999999999999999999999987776666543
No 64
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.31 E-value=8.1e-07 Score=90.18 Aligned_cols=92 Identities=24% Similarity=0.317 Sum_probs=70.5
Q ss_pred CChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH-H-
Q 002832 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE-H- 572 (875)
Q Consensus 495 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~-~- 572 (875)
|++++.|+.++++|++++++||+....+..+++.+|+.... +.+.+... - .+....+|.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-----v~~~~~~~-~---------~~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-----VIGNELFD-N---------GGGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-----EEEEEEEC-T---------TCCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-----EEEEeeee-c---------ccceeeeeECCCCCC
Confidence 88889999999999999999999999999999999996421 11111100 0 012245666665 4
Q ss_pred -HHHHHHHH------hhCCCEEEEEcCCccCHHHHh
Q 002832 573 -KYEIVKRL------QARKHICGMTGDGVNDAPALK 601 (875)
Q Consensus 573 -K~~iV~~l------q~~g~~Vam~GDG~NDapALk 601 (875)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999997
No 65
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.30 E-value=7.8e-06 Score=87.29 Aligned_cols=66 Identities=20% Similarity=0.197 Sum_probs=51.4
Q ss_pred HHHHHHHHHhhC------CCEEEEEcCCccCHHHHhhCCceEEecCcc---HHHhhc--c-CEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR------KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~------g~~Vam~GDG~NDapALk~AdVGIamg~gt---d~ak~a--A-DivL~~~~~~~i~~~i~ 637 (875)
.|..-++.+.+. ...|.++||+.||.+|++.|+.||||+++. +..|+. | ++|..+++=.++.++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 455555555432 456999999999999999999999999987 468876 4 58877778888887775
No 66
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.27 E-value=2.5e-06 Score=80.17 Aligned_cols=113 Identities=24% Similarity=0.413 Sum_probs=88.5
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHH
Q 002832 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (875)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 579 (875)
.|+.+.++||++-+|||.+...+..=|+++||.. ...| -++|....+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------~~qG--------------------------~~dK~~a~~~ 90 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------LYQG--------------------------ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------eeec--------------------------hHhHHHHHHH
Confidence 5899999999999999999999999999999952 1111 3577777766
Q ss_pred HhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCC----hhHHHHHHHHHHHHHH
Q 002832 580 LQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQ 644 (875)
Q Consensus 580 lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~----~~~i~~~i~~gR~~~~ 644 (875)
|.++ -+-|+++||..||-|+|++...++|..++.+-.++.||+|+-... +..+.+.|...+..++
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 6543 346999999999999999999999999999999999999986554 4444555554444443
No 67
>PLN02954 phosphoserine phosphatase
Probab=98.24 E-value=8.3e-06 Score=85.15 Aligned_cols=125 Identities=20% Similarity=0.280 Sum_probs=83.4
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC-CCCCCcccccccccccCCcccHHHHhhhCcEEEE---
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT-NMYPSSALLGQNKDESIVALPVDELIEKADGFAG--- 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar--- 567 (875)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +..........+ . .+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~--g--------------~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS--G--------------EYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC--C--------------cEECccCC
Confidence 478999999999999999999999999999999999999963 111100000000 0 00000
Q ss_pred ---eCHHHHHHHHHHHhhC-C-CEEEEEcCCccCHHHHhh--CCceEEecCc--cHHHhhccCEEecCCChhHHHH
Q 002832 568 ---VFPEHKYEIVKRLQAR-K-HICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 568 ---~sP~~K~~iV~~lq~~-g-~~Vam~GDG~NDapALk~--AdVGIamg~g--td~ak~aADivL~~~~~~~i~~ 634 (875)
..+..|.+.++.+.++ | +.+.|+||+.||..|.++ ++++++.|.+ .+.....+|+++ +++..+..
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 1123477777766654 2 468899999999999777 5776766532 233445689988 44666554
No 68
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.21 E-value=2.5e-06 Score=82.72 Aligned_cols=110 Identities=22% Similarity=0.225 Sum_probs=76.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
.+-|++++.++.||+.|.+|.++||--...+..+|.++||+........+.=+. +..... ++.. -.-....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~-~Gk~~g--fd~~------~ptsdsg 158 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDK-DGKYLG--FDTN------EPTSDSG 158 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeecc-CCcccc--cccC------CccccCC
Confidence 467999999999999999999999999999999999999975322111110000 000000 0000 0001124
Q ss_pred HHHHHHHHHhhC--CCEEEEEcCCccCHHHHhhCCceEEec
Q 002832 572 HKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVA 610 (875)
Q Consensus 572 ~K~~iV~~lq~~--g~~Vam~GDG~NDapALk~AdVGIamg 610 (875)
-|.++++.++++ -..++|+|||.||.+|+..||-=|+.+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 799999999885 347999999999999999977666654
No 69
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.18 E-value=1.8e-05 Score=85.30 Aligned_cols=67 Identities=22% Similarity=0.172 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhh-------CCCEEEEEcCCccCHHHHhhCCceEEecCcc-HH-----HhhccCEEecCCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQA-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~-------~g~~Vam~GDG~NDapALk~AdVGIamg~gt-d~-----ak~aADivL~~~~~~~i~~~i~ 637 (875)
-+|..-++.+.+ ....|+.+|||-||.+||+.|++|||||++. +. .+..||++....+-.++.++++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 346655555543 3356899999999999999999999999544 21 3447889888888778887775
No 70
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.10 E-value=3.2e-05 Score=83.45 Aligned_cols=66 Identities=24% Similarity=0.298 Sum_probs=50.6
Q ss_pred HHHHHHHHHhh----CC-CEEEEEcCCccCHHHHhhCCceEEecCccHHHh----hcc-CEEe--cCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQA----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~----~g-~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak----~aA-DivL--~~~~~~~i~~~i~ 637 (875)
.|..-++.+.+ .. +.|+++||+.||.+|++.|++|++|++|.+..| ++| +.+. ..++=..+.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 55555555543 24 789999999999999999999999999999999 666 5666 3444566766664
No 71
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.10 E-value=1.4e-05 Score=83.24 Aligned_cols=132 Identities=12% Similarity=0.047 Sum_probs=84.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC--CcccccccccccCCcccHHHHhhhCcE--E-E
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSALLGQNKDESIVALPVDELIEKADG--F-A 566 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v--f-a 566 (875)
+++|++.+.++.|++.|+++.++||-....+..+.+++ +...... ...+.+.......... .. + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p---------~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHP---------CDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCC---------ccccccc
Confidence 68999999999999999999999999999999999887 6431110 0011111110000000 00 0 0
Q ss_pred EeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhh--ccCEEecCCChhHHHHHH
Q 002832 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARS--ASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 567 r~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~--aADivL~~~~~~~i~~~i 636 (875)
++ ...|..+++.++.....+.|+|||.||.+|.++||+.++-+.-.+.+++ .+.+.+ ++|..+...+
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 01 1248889998887777899999999999999999997773311122222 233333 5577776665
No 72
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.05 E-value=7.7e-06 Score=81.91 Aligned_cols=101 Identities=22% Similarity=0.256 Sum_probs=69.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
+++|++.+.++.+++.|+++.++||.....+..+++.+|+..- ... .+...+ +..+.... ..-....+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~~-~~~~~~-~g~~~g~~--------~~~~~~~~~ 141 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FAN-RLEFDD-NGLLTGPI--------EGQVNPEGE 141 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-eee-eEEECC-CCEEeCcc--------CCcccCCcc
Confidence 4689999999999999999999999999999999999998521 110 000000 00000000 000124468
Q ss_pred HHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhC
Q 002832 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA 603 (875)
Q Consensus 572 ~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~A 603 (875)
.|...++.+++. ...+.++|||.||.+|++.|
T Consensus 142 ~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 142 CKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred hHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 899999887654 34689999999999999875
No 73
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.04 E-value=3.5e-05 Score=80.48 Aligned_cols=127 Identities=17% Similarity=0.144 Sum_probs=89.6
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++.|++.+.++.|++.|+++.++||........+.++.|+.... ...+.++... ...-.|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 152 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDSLP-----------------NKKPDP 152 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCCCC-----------------CCCcCh
Confidence 468999999999999999999999999999999999999985321 1111111100 011123
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecC----ccHHHhhccCEEecCCChhHHHHHHHH
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLT 638 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~----gtd~ak~aADivL~~~~~~~i~~~i~~ 638 (875)
+--..+.+.++.....+.|+||+.||..|.++|++ +|.+.. ..+.....+|+++ +++..+...+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 153 APLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred HHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 33344555555556679999999999999999998 555542 2344556788887 678888887754
No 74
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.04 E-value=1.1e-05 Score=81.57 Aligned_cols=113 Identities=15% Similarity=0.059 Sum_probs=75.9
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCccc-HHHHhhhCcEEEE-e
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALP-VDELIEKADGFAG-V 568 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vfar-~ 568 (875)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+.... ..++..+. .. +... +.-...++.++.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~-~~--~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIYSNPA-SF--DNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEeccCc-eE--CCCCcEEEecCCCCccCcCC
Confidence 378999999999999999999999999999999999998885321 11121111 00 0000 0000000111111 1
Q ss_pred CHHHHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEE
Q 002832 569 FPEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 569 sP~~K~~iV~~lq~~-g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
....|.++++.++++ ...+.++|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123599999999887 8889999999999999999987554
No 75
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.93 E-value=2.5e-05 Score=80.15 Aligned_cols=108 Identities=16% Similarity=0.093 Sum_probs=76.6
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEE-EEe
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF-AGV 568 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vf-ar~ 568 (875)
..+++|++.+.++.+++.|+++.++||-....+..+++.+|+..- .........+ ...... +. -.+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~~--g~~~g~----------~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESED--GIYTGN----------IDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcCC--CEEeCC----------ccCCCC
Confidence 346899999999999999999999999999999999999998531 1110110000 000000 00 123
Q ss_pred CHHHHHHHHHHHhh-CCC---EEEEEcCCccCHHHHhhCCceEEec
Q 002832 569 FPEHKYEIVKRLQA-RKH---ICGMTGDGVNDAPALKKADIGIAVA 610 (875)
Q Consensus 569 sP~~K~~iV~~lq~-~g~---~Vam~GDG~NDapALk~AdVGIamg 610 (875)
.++.|.+.++.+.+ .|. .+.++||+.||.|+++.|+.++++.
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 46788888876654 342 5889999999999999999999886
No 76
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.86 E-value=9.9e-05 Score=76.88 Aligned_cols=126 Identities=17% Similarity=0.223 Sum_probs=94.6
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccc-ccccccCCcccHHHHhhhCcEEEEe
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLG-QNKDESIVALPVDELIEKADGFAGV 568 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vfar~ 568 (875)
..++-|++++++++|+++|++..++|++....+..+.+..|+..-. ..+.| .... ..+-
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~~~-----------------~~KP 146 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDVP-----------------PPKP 146 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCCCC-----------------CCCc
Confidence 4568899999999999999999999999999999999999996431 11111 1110 1122
Q ss_pred CHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCC---ceEEecC--ccHHHhhccCEEecCCChhHHHHHHH
Q 002832 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 569 sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~Ad---VGIamg~--gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.|+....+.+.+....+.+.||||..||..|=|+|+ ||+..|. +.......+|+++ +++..+...+.
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred CHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 467777777777666457999999999999999998 6777773 4567777799998 55777766543
No 77
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.81 E-value=0.00011 Score=75.65 Aligned_cols=124 Identities=17% Similarity=0.152 Sum_probs=84.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+++++|++.|+++.++||.+...+...-+..|+.... ..++..++. ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC-----------------CCCCCChH
Confidence 67899999999999999999999999988888888888885311 111111110 01122233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-e--c--CccHHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-V--A--DATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-m--g--~gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
-=.++.+.++-..+.+.|+||+.+|..|-++|++... + | +..+..++.+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 3344445554445679999999999999999998643 2 3 23345667899987 5566666544
No 78
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.70 E-value=0.00011 Score=69.34 Aligned_cols=118 Identities=15% Similarity=0.071 Sum_probs=77.4
Q ss_pred ccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
.-..++++++.+.+++|++.|++++++||.....+....+++|+... ...++....... -..............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAI-YYPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhh-hcccccccccccccccCC
Confidence 34568999999999999999999999999999999999999987321 011111100000 000000000011112345
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhh-CCceEE
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK-ADIGIA 608 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~-AdVGIa 608 (875)
-.|+.+..+.+.+....+.+.++||+.||..|.+. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 56777777777777666789999999999999998 444443
No 79
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.56 E-value=0.0004 Score=74.75 Aligned_cols=125 Identities=15% Similarity=0.156 Sum_probs=81.5
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++.|++.++++.|++.|+++.++||-+...+..+.++.|+.... ..++.+++.. ..+-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 478999999999999999999999999998888888888874311 1111111100 001112
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecC----ccHHHhhccCEEecCCChhHHHHHH
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~----gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
+-=..+.+.+.-..+.+.|+||+.||..+.++|++ .+++.. ..+..+..+|.++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 22223333333334568999999999999999997 344432 2333455789888 4577766543
No 80
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.53 E-value=0.00042 Score=71.79 Aligned_cols=124 Identities=18% Similarity=0.137 Sum_probs=83.4
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++||.....+..+-+..|+... -..++..++.. ..+-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~-----------------~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF--FDVVITLDDVE-----------------HAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc--eeEEEecCcCC-----------------CCCCCcH
Confidence 4789999999999999999999999999999998899998532 11112111110 0112234
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce---EEecCc--cHHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG---IAVADA--TDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG---Iamg~g--td~ak~aADivL~~~~~~~i~~~i 636 (875)
--.++.+.+.-....+.|+||..+|..|-++|++- +.-|.+ .+.....+|.++ +++..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 33444555544445689999999999999999984 333322 223445688876 5677776654
No 81
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.44 E-value=0.00035 Score=74.22 Aligned_cols=148 Identities=16% Similarity=0.126 Sum_probs=94.2
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC-----CCcccccc--cccc--------------
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY-----PSSALLGQ--NKDE-------------- 548 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-----~~~~~~~~--~~~~-------------- 548 (875)
..+..|+..++++++++.|+.++.+||......+.+.+++++..... ...+..+. ..+.
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 34567899999999999999999999999999999999888754310 00011000 0000
Q ss_pred ---------c-----------------CCccc----H---HHHhhh----CcE-EE-----EeCH--HHHHHHHHHHhhC
Q 002832 549 ---------S-----------------IVALP----V---DELIEK----ADG-FA-----GVFP--EHKYEIVKRLQAR 583 (875)
Q Consensus 549 ---------~-----------------~~~~~----~---~~~~~~----~~v-fa-----r~sP--~~K~~iV~~lq~~ 583 (875)
. ..... + .+.+.+ +.+ ++ .+.| ..|..-++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 00000 1 111111 111 11 3344 4688888887654
Q ss_pred ----CCEEEEEcCCccCHHHHhh-CCceEEecCccHHHhhccC-------EEecCCChhHHHHHHH
Q 002832 584 ----KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 637 (875)
Q Consensus 584 ----g~~Vam~GDG~NDapALk~-AdVGIamg~gtd~ak~aAD-------ivL~~~~~~~i~~~i~ 637 (875)
...|.++||+.||.+|++. ++.|++|+++.+..|+.++ ++-....-+++.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3568999999999999998 7799999999988886543 4333333455555553
No 82
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.43 E-value=0.0006 Score=71.20 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=38.6
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (875)
.+..-+++.++|++|++.|++++++||..+..+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556668999999999999999999999999999999999974
No 83
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.43 E-value=0.00055 Score=70.68 Aligned_cols=122 Identities=15% Similarity=0.130 Sum_probs=79.6
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|++.|+++.++|+-+...+..+.++.|+.... ..++.+++.. ..+-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC-----------------CCCCChH
Confidence 57999999999999999999999999999999999999985321 1111111110 0111122
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-e--cCc--cHHHhhccCEEecCCChhHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-m--g~g--td~ak~aADivL~~~~~~~i~~ 634 (875)
-=.+..+.+.-....+.|+||..||..|.++|++-.. + |.+ .+.....+|.++ +++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 2233333333334568999999999999999997654 2 322 123334688877 44665543
No 84
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.23 E-value=0.00042 Score=73.03 Aligned_cols=66 Identities=18% Similarity=0.208 Sum_probs=54.4
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccC----EEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aAD----ivL~~~~~~~i~~~i~ 637 (875)
.|...++.+.++ | ..|+++||+.||.+|++.|+.||+|+++.+..|+.|| +|...++=.++.++|+
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 688888877654 3 2588999999999999999999999999999999999 6665656667777765
No 85
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.16 E-value=0.0017 Score=67.64 Aligned_cols=119 Identities=14% Similarity=0.175 Sum_probs=78.1
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
-++.|++.++++.|++.|+++.++|+........+.++.|+..-. ..++.+.+.. ..+-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKLP-----------------YSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccCC-----------------CCCCCH
Confidence 367899999999999999999999999999999999999985321 1122111100 011223
Q ss_pred HHHHHHHHHHhhCC---CEEEEEcCCccCHHHHhhCCceEEec-Cc---cHHHhhccCEEecCCChhHHH
Q 002832 571 EHKYEIVKRLQARK---HICGMTGDGVNDAPALKKADIGIAVA-DA---TDAARSASDIVLTEPGLSVII 633 (875)
Q Consensus 571 ~~K~~iV~~lq~~g---~~Vam~GDG~NDapALk~AdVGIamg-~g---td~ak~aADivL~~~~~~~i~ 633 (875)
+ -+-+.+++.| +.+.|+||..||..|-++|++....- .+ .+.-...+|+++ .+|..+.
T Consensus 152 ~---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 152 E---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred H---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 2 2233344433 45899999999999999999875442 22 222233577776 4465554
No 86
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.14 E-value=0.0022 Score=66.58 Aligned_cols=126 Identities=17% Similarity=0.152 Sum_probs=80.5
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++.||+.+.+++|++.|+++.++||-....+..+-+..|+.....-..++.+.+.. ..+-.|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~-----------------~~KP~p 148 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA-----------------AGRPAP 148 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC-----------------CCCCCH
Confidence 378999999999999999999999999999999999999985111111222221110 011122
Q ss_pred HHHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEE--ecCcc----HHHhhccCEEecCCChhHHHHH
Q 002832 571 EHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIA--VADAT----DAARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g~~Vam~GDG~NDapALk~AdVGIa--mg~gt----d~ak~aADivL~~~~~~~i~~~ 635 (875)
+-=....+.+.-. ...+.|+||+.+|..|-++|++..+ +..|. +.....+|.++ ++++.+...
T Consensus 149 ~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 2222223333322 2569999999999999999999863 33332 12233577776 456665443
No 87
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.14 E-value=0.0052 Score=65.39 Aligned_cols=128 Identities=13% Similarity=0.091 Sum_probs=84.2
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC----------CCcccccccccccCCcccHHHHhh
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY----------PSSALLGQNKDESIVALPVDELIE 560 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 560 (875)
-++||++.+.++.|++.|+++.++||-....+..+.++.|+..... ....++|.. +.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~P------------ 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-GP------------ 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-CC------------
Confidence 4689999999999999999999999999999999999999853211 011111210 00
Q ss_pred hCcEEEEeCHHHHHHHHHH-----Hh--hCCCEEEEEcCCccCHHHHhhC---CceEEec--Cc-----cHHHhhccCEE
Q 002832 561 KADGFAGVFPEHKYEIVKR-----LQ--ARKHICGMTGDGVNDAPALKKA---DIGIAVA--DA-----TDAARSASDIV 623 (875)
Q Consensus 561 ~~~vfar~sP~~K~~iV~~-----lq--~~g~~Vam~GDG~NDapALk~A---dVGIamg--~g-----td~ak~aADiv 623 (875)
-+....|.+.+.. ++ .....|.++|||.||.+|-.-. +--+.+| +. -+.=+++=|||
T Consensus 187 ------~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 187 ------LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred ------cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 0011345554432 22 2235688999999999996543 2234444 22 23456788999
Q ss_pred ecCCChhHHHHHHH
Q 002832 624 LTEPGLSVIISAVL 637 (875)
Q Consensus 624 L~~~~~~~i~~~i~ 637 (875)
|.+|.=-.++.+|.
T Consensus 261 l~~D~t~~v~~~il 274 (277)
T TIGR01544 261 LVQDETLEVANSIL 274 (277)
T ss_pred EECCCCchHHHHHH
Confidence 99997666666653
No 88
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.11 E-value=0.0034 Score=65.33 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=35.8
Q ss_pred CCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002832 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (875)
Q Consensus 494 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (875)
-+.+.++|++|+++|++++++||.....+..+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999975
No 89
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.09 E-value=0.0043 Score=66.53 Aligned_cols=138 Identities=11% Similarity=0.091 Sum_probs=83.7
Q ss_pred CCCCChHHHHHHHHh-CCCcEEEEcCCCHHHHHHHHHHhCCC--C-CCC-----CCc----ccc----------------
Q 002832 492 PPRHDSAETIRRALN-LGVNVKMITGDQLAIAKETGRRLGMG--T-NMY-----PSS----ALL---------------- 542 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ia~~lGi~--~-~~~-----~~~----~~~---------------- 542 (875)
.+-+++.++|++|++ .|++++++||.+........+.+++. . +.. ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 355789999999998 79999999999999888887766642 1 100 000 000
Q ss_pred ---cccccc----------cCCc--ccHHHH----hhhCc--------EEEEeCH--HHHHHHHHHHhhC----CCEEEE
Q 002832 543 ---GQNKDE----------SIVA--LPVDEL----IEKAD--------GFAGVFP--EHKYEIVKRLQAR----KHICGM 589 (875)
Q Consensus 543 ---~~~~~~----------~~~~--~~~~~~----~~~~~--------vfar~sP--~~K~~iV~~lq~~----g~~Vam 589 (875)
|...+. ...+ +.+.++ .+... -+-.+.| .+|..-++.+.+. +..|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000000 0000 001111 11111 1223344 4788888776543 356889
Q ss_pred EcCCccCHHHHhhC----CceEEecCccHHHhhccCEEecCCChhHHHHH
Q 002832 590 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 590 ~GDG~NDapALk~A----dVGIamg~gtd~ak~aADivL~~~~~~~i~~~ 635 (875)
+||+.||.+|++.+ +.||+||++. ..|++.|.+ -..+...
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~--~~~v~~~ 239 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG--VPDVWSW 239 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC--HHHHHHH
Confidence 99999999999999 9999999865 356787753 4444433
No 90
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.08 E-value=0.0028 Score=66.45 Aligned_cols=124 Identities=14% Similarity=0.108 Sum_probs=82.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.+...+..+-++.|+.... ..++.+.+.. ..+-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~-----------------~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTLA-----------------ERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcCC-----------------CCCCCHH
Confidence 57899999999999999999999999988888888888875321 1112111110 1122344
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-e--cCc--c-HHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-V--ADA--T-DAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-m--g~g--t-d~ak~aADivL~~~~~~~i~~~i 636 (875)
-=..+.+.+.-....+.|+||+.||..|-++|++-.. + |.+ . ......+|+++ +++..+.+..
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 4445555565555679999999999999999997642 3 321 1 12234689988 5566665544
No 91
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.08 E-value=0.0057 Score=65.76 Aligned_cols=121 Identities=14% Similarity=0.101 Sum_probs=80.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+.... ..++.+++. . ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F--~~vi~~~~~------------------~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF--SVVQAGTPI------------------L--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe--EEEEecCCC------------------C--CCHH
Confidence 57899999999999999999999999999999999999985321 111111110 0 0122
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-ecCc--cH--HHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VADA--TD--AARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-mg~g--td--~ak~aADivL~~~~~~~i~~~i 636 (875)
-=..+++.++-....++|+||+.+|..|-++|++-.. +..| +. .....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 1122223333234568999999999999999997543 2222 22 3344689987 6677777654
No 92
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.90 E-value=0.0071 Score=64.99 Aligned_cols=93 Identities=14% Similarity=0.084 Sum_probs=62.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++-|++.++++.|++.|+++.++||.....+..+-+..|+..-. ...++.+++.. ..+-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-~d~i~~~~~~~-----------------~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-PDHVVTTDDVP-----------------AGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-ceEEEcCCcCC-----------------CCCCChH
Confidence 56899999999999999999999999988887777777764211 11122221110 0111222
Q ss_pred HHHHHHHHHhhCC----CEEEEEcCCccCHHHHhhCCc
Q 002832 572 HKYEIVKRLQARK----HICGMTGDGVNDAPALKKADI 605 (875)
Q Consensus 572 ~K~~iV~~lq~~g----~~Vam~GDG~NDapALk~AdV 605 (875)
- +.+.+++.| ..+.|+||..+|..|-++|++
T Consensus 163 ~---~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 163 M---ALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred H---HHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 2 334444433 468999999999999999996
No 93
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.88 E-value=0.0059 Score=65.19 Aligned_cols=121 Identities=17% Similarity=0.098 Sum_probs=79.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.+++|++.|+++.++|+.....+..+-+.+|+..- -..++.+.+.. ..+-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC-----------------CCCCCHH
Confidence 5689999999999999999999999999999998888998532 12233332211 0111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-Ee-cCccHHHhhccCEEecCCChhHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTEPGLSVII 633 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGI-am-g~gtd~ak~aADivL~~~~~~~i~ 633 (875)
-=....+.+.-....+.|+||..+|..|-++|++-. ++ |.++......+|.++ ++++.+.
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el~ 231 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDLS 231 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHHH
Confidence 223334444444456899999999999999999843 33 322222233578776 4455543
No 94
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.86 E-value=0.0092 Score=59.69 Aligned_cols=145 Identities=21% Similarity=0.243 Sum_probs=96.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccccccc-------c------cCCcccHHHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKD-------E------SIVALPVDEL 558 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~ 558 (875)
++-|++.++.+.|++ -...+++|--..+-+.++|..+|++........+.-++.. + ..+..+-+++
T Consensus 83 ~lvPgA~etm~~l~~-~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQE-RWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhc-cCCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 457999999999974 4567777778888899999999996432211111111000 0 0111111222
Q ss_pred hhhCc-EEEEeCHHHHHHHHHHHhhC------------------CCEEEEEcCCccCHHHHhhCC--ceEEec-CccHHH
Q 002832 559 IEKAD-GFAGVFPEHKYEIVKRLQAR------------------KHICGMTGDGVNDAPALKKAD--IGIAVA-DATDAA 616 (875)
Q Consensus 559 ~~~~~-vfar~sP~~K~~iV~~lq~~------------------g~~Vam~GDG~NDapALk~Ad--VGIamg-~gtd~a 616 (875)
.++.+ +|.|..|..-.+|++..+.- ....+.+||.+.|..||+.+. =|+|+. +|.+-|
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 22222 58888887655555544422 234688999999999999885 358887 899989
Q ss_pred hhccCEEecCCChhHHHHHHH
Q 002832 617 RSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 617 k~aADivL~~~~~~~i~~~i~ 637 (875)
..-||+.+..++..+....|+
T Consensus 242 l~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccceEEeccchhhhhHHHH
Confidence 889999999999888887775
No 95
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.79 E-value=0.009 Score=63.58 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=66.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++||.....+..+-++.|+.... ...++.+++.. ..+-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-~d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-PDYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-CceEEccccCC-----------------CCCCCHH
Confidence 56899999999999999999999999999999888888875321 11222222111 0111233
Q ss_pred HHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCce
Q 002832 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 572 ~K~~iV~~lq~~-g~~Vam~GDG~NDapALk~AdVG 606 (875)
-=....+.+.-. .+.+.|+||..+|..|-++|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 323333333321 34589999999999999999964
No 96
>PRK11590 hypothetical protein; Provisional
Probab=96.75 E-value=0.0069 Score=62.59 Aligned_cols=106 Identities=13% Similarity=0.051 Sum_probs=74.5
Q ss_pred CCCCChHHHH-HHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEE-EEeC
Q 002832 492 PPRHDSAETI-RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF-AGVF 569 (875)
Q Consensus 492 ~lr~~~~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vf-ar~s 569 (875)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+... .. +.+.+++.... -.+. ..|.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~---~~-~i~t~l~~~~t----------g~~~g~~c~ 160 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR---VN-LIASQMQRRYG----------GWVLTLRCL 160 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc---Cc-eEEEEEEEEEc----------cEECCccCC
Confidence 4589999999 578889999999999999999999999996210 01 11222211000 0011 2356
Q ss_pred HHHHHHHHHHH-hhCCCEEEEEcCCccCHHHHhhCCceEEecC
Q 002832 570 PEHKYEIVKRL-QARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (875)
Q Consensus 570 P~~K~~iV~~l-q~~g~~Vam~GDG~NDapALk~AdVGIamg~ 611 (875)
-+.|.+-++.. .......-+=||..||.|+|+.|+-.++++.
T Consensus 161 g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 161 GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred ChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 68999877754 3333445578999999999999999999974
No 97
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.71 E-value=0.01 Score=63.07 Aligned_cols=116 Identities=13% Similarity=0.128 Sum_probs=78.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|++.|+++.++|+-+...+...-+.+|+... -..++.+++.. ..+-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF--FQAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh--CcEEEecCcCC-----------------CCCCChH
Confidence 5789999999999999999999999999999999999998532 12233332211 1122344
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-ecCc---cHHHhhccCEEecC
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VADA---TDAARSASDIVLTE 626 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-mg~g---td~ak~aADivL~~ 626 (875)
-=....+.+.-....+.|+||..+|..|-++|++-.. +..| .+.....+|.++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 4444455555445668999999999999999987432 2222 12223468888744
No 98
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.71 E-value=0.0066 Score=62.64 Aligned_cols=106 Identities=11% Similarity=0.034 Sum_probs=74.0
Q ss_pred CCCCChHHHHH-HHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcE-EEEeC
Q 002832 492 PPRHDSAETIR-RALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADG-FAGVF 569 (875)
Q Consensus 492 ~lr~~~~~~I~-~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-far~s 569 (875)
.++|++.+.|+ .+++.|++++++|+=....+..+|+..|+... ..++ +.+++.. +. -.+ =..|.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~-~g---------g~~~g~~c~ 159 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERG-NG---------GWVLPLRCL 159 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEe-CC---------ceEcCccCC
Confidence 46999999996 78989999999999999999999998665321 0111 2222100 00 001 12356
Q ss_pred HHHHHHHHHHHh-hCCCEEEEEcCCccCHHHHhhCCceEEecC
Q 002832 570 PEHKYEIVKRLQ-ARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (875)
Q Consensus 570 P~~K~~iV~~lq-~~g~~Vam~GDG~NDapALk~AdVGIamg~ 611 (875)
-++|.+-++..- ......-+=||..||.|+|+.||-.++++.
T Consensus 160 g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 160 GHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred ChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 689998776543 223345578999999999999999999873
No 99
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.69 E-value=0.0028 Score=64.72 Aligned_cols=94 Identities=18% Similarity=0.099 Sum_probs=68.2
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeC
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF 569 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~s 569 (875)
.+++.++++++++.|++.|+++.++||-....+..+-+..|+..-. ..++.+++ +..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~------------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED------------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC------------------CCCCcC
Confidence 4557788899999999999999999999999999999999985321 11221111 111334
Q ss_pred HHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhC
Q 002832 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (875)
Q Consensus 570 P~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~A 603 (875)
|+--..+.+.+.-....+.|+||+.+|..|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5555556666665566799999999999887765
No 100
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.65 E-value=0.011 Score=69.90 Aligned_cols=48 Identities=8% Similarity=0.071 Sum_probs=39.5
Q ss_pred EEeccCCC-CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002832 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (875)
Q Consensus 485 G~i~~~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (875)
|.+.-.|. .-+.+.++|++|+++|+.+++.||.....+..+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44444333 3457899999999999999999999999999999999873
No 101
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.58 E-value=0.015 Score=61.95 Aligned_cols=42 Identities=7% Similarity=0.022 Sum_probs=38.0
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (875)
..-+.+.++|++|++.||.+++.||-.......+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455679999999999999999999999999999999999853
No 102
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.54 E-value=0.0061 Score=63.74 Aligned_cols=89 Identities=19% Similarity=0.228 Sum_probs=62.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCC----CHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
.|.|++++.++.+++.|+++.++||. ...++..+.+..|++........+.|+..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 46788999999999999999999995 36799999998999532111222222110
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
.-.+|.. .+++.| .+.|+||..+|..|-++|++-
T Consensus 173 -~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 -GQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -CCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 0133444 344444 488999999999999999874
No 103
>PLN02382 probable sucrose-phosphatase
Probab=96.47 E-value=0.0042 Score=70.75 Aligned_cols=48 Identities=23% Similarity=0.207 Sum_probs=40.6
Q ss_pred HHHHHHHHHhhC----C---CEEEEEcCCccCHHHHhhCC-ceEEecCccHHHhhc
Q 002832 572 HKYEIVKRLQAR----K---HICGMTGDGVNDAPALKKAD-IGIAVADATDAARSA 619 (875)
Q Consensus 572 ~K~~iV~~lq~~----g---~~Vam~GDG~NDapALk~Ad-VGIamg~gtd~ak~a 619 (875)
.|..-++.|.+. | ..|..+||+.||.+||+.|+ .||+|+++.+..|+.
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~ 230 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQW 230 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHH
Confidence 488777777654 2 37899999999999999999 699999999988874
No 104
>PRK11587 putative phosphatase; Provisional
Probab=96.46 E-value=0.014 Score=60.62 Aligned_cols=113 Identities=14% Similarity=0.131 Sum_probs=71.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+...-+..|+... ..++.+++.. ..+-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~---~~i~~~~~~~-----------------~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP---EVFVTAERVK-----------------RGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc---cEEEEHHHhc-----------------CCCCCcH
Confidence 5789999999999999999999999887666665566676321 1122111100 0111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EEecCcc-HHHhhccCEEe
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVL 624 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG-Iamg~gt-d~ak~aADivL 624 (875)
-=....+.+.-....+.|+||..+|..|-++|++- |++..+. +.....+|.++
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~ 197 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVL 197 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEe
Confidence 32333344433446799999999999999999984 5554332 22334577776
No 105
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.43 E-value=0.0099 Score=60.95 Aligned_cols=39 Identities=31% Similarity=0.392 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG 530 (875)
++.+++.+++++|++.|++++++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999998888754
No 106
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.36 E-value=0.012 Score=68.48 Aligned_cols=123 Identities=11% Similarity=0.096 Sum_probs=82.0
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ..++.+++.. ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 68899999999999999999999999999999999999885321 1222222111 011233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecC--ccHHHhhccCEEecCCChhHHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD--ATDAARSASDIVLTEPGLSVIISAVLT 638 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~--gtd~ak~aADivL~~~~~~~i~~~i~~ 638 (875)
-=....+.++ ...+.|+||..+|..|-++|++ .|++.. +.+-....+|+++ ++++.+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 2222222222 3468999999999999999997 344432 2222234588887 567777766543
No 107
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.36 E-value=0.0061 Score=59.13 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=68.4
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
.++|+-++.++.+++.+|+++++|+--......+=++++=........+...+. . ....-...++...+ ..--.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~-~--ih~dg~h~i~~~~d---s~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND-Y--IHIDGQHSIKYTDD---SQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc-e--EcCCCceeeecCCc---cccCC
Confidence 579999999999999999999999877655555555544111100000100000 0 00000000000000 11125
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
+|...|+.+++..+.+-|||||+.|..|-+.+|+=.|
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 7999999999999999999999999998887777554
No 108
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.33 E-value=0.015 Score=60.35 Aligned_cols=98 Identities=18% Similarity=0.192 Sum_probs=65.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH-
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP- 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP- 570 (875)
++.|++.+++++|++.|+++.++|+-+...+...-+.+|+.... ..++.+.+ ..+..|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc-------------------CCCCCCC
Confidence 57899999999999999999999998887777777888874211 11222211 111223
Q ss_pred -HHHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCc-eEEec
Q 002832 571 -EHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADI-GIAVA 610 (875)
Q Consensus 571 -~~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdV-GIamg 610 (875)
+-=....+.+.-....+.|+||.. +|..+-++|++ .|.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 222223333333345689999998 99999999987 34444
No 109
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.28 E-value=0.025 Score=56.83 Aligned_cols=128 Identities=20% Similarity=0.112 Sum_probs=71.6
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHH---------------HHHHHHHHhCCCCCCCCCcccccccccccCCcccHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVD 556 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~---------------tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (875)
++.||+.+++++|++.|+++.++|..+.. ....+-++.|+.-. .++...... ..+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~~----~~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHHP----EDG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCCC----CCC--
Confidence 46899999999999999999999987621 11122233444210 111100000 000
Q ss_pred HHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-ecCccH---HHhhcc--CEEecCCChh
Q 002832 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VADATD---AARSAS--DIVLTEPGLS 630 (875)
Q Consensus 557 ~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-mg~gtd---~ak~aA--DivL~~~~~~ 630 (875)
.-..+-.|+--....+.+.-..+.+.|+||..+|..+-++|++-.- +..|.. .....+ |.++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 0011223444444555555445679999999999999999997422 223321 112235 7776 4577
Q ss_pred HHHHHHH
Q 002832 631 VIISAVL 637 (875)
Q Consensus 631 ~i~~~i~ 637 (875)
.+...+.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 6666543
No 110
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.14 E-value=0.017 Score=58.87 Aligned_cols=94 Identities=15% Similarity=0.161 Sum_probs=64.6
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+++++|++.|+++.++|+-+........+.+|+.... ..++..++. .+..|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~-------------------~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADAV-------------------RAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhhc-------------------CCCCCC
Confidence 57899999999999999999999998888888888888874221 112221111 111232
Q ss_pred H--HHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 572 H--KYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 572 ~--K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
. =..+.+.+.-....+.|+||+.+|..+-++|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 1 1233334433345688999999999999988875
No 111
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.06 E-value=0.053 Score=66.85 Aligned_cols=170 Identities=18% Similarity=0.203 Sum_probs=99.0
Q ss_pred HHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEecc--CCCCCCChHHHHHHHHh-CCCcEEEEcCCCHHHHHH
Q 002832 448 HAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPL--FDPPRHDSAETIRRALN-LGVNVKMITGDQLAIAKE 524 (875)
Q Consensus 448 ~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~--~D~lr~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ 524 (875)
+...+.+...-.|.+++-+.. |++....- ...+-+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344555666667888777654 44432111 12366799999999999 699999999999988877
Q ss_pred HHHHhCCC--C-CCC----CCc---cccc----------------------ccccc---c------CCcccH--------
Q 002832 525 TGRRLGMG--T-NMY----PSS---ALLG----------------------QNKDE---S------IVALPV-------- 555 (875)
Q Consensus 525 ia~~lGi~--~-~~~----~~~---~~~~----------------------~~~~~---~------~~~~~~-------- 555 (875)
.....++. . +.. ... .... ...+. . ..+.++
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 66544431 0 000 000 0000 00000 0 000111
Q ss_pred HHHhhh------CcE-----EEEeCH--HHHHHHHHHHhhC--CCEEEEEcCCccCHHHHhhC---CceEEecCccHHHh
Q 002832 556 DELIEK------ADG-----FAGVFP--EHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAAR 617 (875)
Q Consensus 556 ~~~~~~------~~v-----far~sP--~~K~~iV~~lq~~--g~~Vam~GDG~NDapALk~A---dVGIamg~gtd~ak 617 (875)
.+.+.. ..+ +-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 111 113334 5798888888764 24799999999999999997 588888874 4
Q ss_pred hccCEEecCCChhHHHHHH
Q 002832 618 SASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 618 ~aADivL~~~~~~~i~~~i 636 (875)
.+|++.|.+. ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 5788888653 4444433
No 112
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.04 E-value=0.0091 Score=62.50 Aligned_cols=88 Identities=19% Similarity=0.207 Sum_probs=61.4
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCC----CHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEe
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (875)
+.+++++.++.+++.|+++.++|+- ...++..+.+.+|+... ...++.++... .-
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f~~i~~~d~~~-------------------~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--NPVIFAGDKPG-------------------QY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh--eeEEECCCCCC-------------------CC
Confidence 4555999999999999999999997 67799999999999531 11222221110 00
Q ss_pred CHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 569 sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
.| +|. ..+++.| .+.|+||..||..|-++|++-
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 12 232 2445555 478999999999999999864
No 113
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.97 E-value=0.022 Score=62.32 Aligned_cols=109 Identities=13% Similarity=0.050 Sum_probs=76.3
Q ss_pred ccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
...+++.|++.+++++|++.|+++.++||.....+..+.+.+|+..... ..+.+.+. ....+.... --+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~--------~~~~~~~~~-~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPP--------DMHFQREQG-DKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcc--------hhhhcccCC-CCC
Confidence 3568899999999999999999999999999999999999998853111 11111110 000000000 024
Q ss_pred eCHHHHHHHHHHHhh-CCCEEEEEcCCccCHHHHhhCCceE
Q 002832 568 VFPEHKYEIVKRLQA-RKHICGMTGDGVNDAPALKKADIGI 607 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~-~g~~Vam~GDG~NDapALk~AdVGI 607 (875)
-.|+-|....+.+-. .-..+.|+||..||+.+-++|++-.
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 447777877776544 3367999999999999999999864
No 114
>PRK06769 hypothetical protein; Validated
Probab=95.90 E-value=0.035 Score=55.42 Aligned_cols=98 Identities=9% Similarity=0.013 Sum_probs=58.5
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCHH--------HHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcE
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQLA--------IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADG 564 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~~--------tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 564 (875)
+.|++++++++|++.|+++.++|+.... .....-+..|+..-. ......+++..
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~~----------------- 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIY-LCPHKHGDGCE----------------- 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEE-ECcCCCCCCCC-----------------
Confidence 6899999999999999999999987631 122223344542100 00000000000
Q ss_pred EEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE
Q 002832 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 565 far~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
..+-.|+-=.++.+.+...-+.+.|+||..+|..|=++|++-..
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 11222333344444444344569999999999999999997544
No 115
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.85 E-value=0.013 Score=58.76 Aligned_cols=94 Identities=12% Similarity=0.040 Sum_probs=58.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|+++|+++.++|+... +...-+.+|+.... ..++.+.+.. ..+-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEIK-----------------KGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhcC-----------------CCCCChH
Confidence 6789999999999999999999997532 34566777774221 1122111110 1111222
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
-=....+.+.-....+.|+||..+|+.|-++|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 21223333332334588999999999999999874
No 116
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.84 E-value=0.034 Score=60.31 Aligned_cols=122 Identities=18% Similarity=0.138 Sum_probs=72.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+-+......+-+..+...-...-..+.+.+.. ..+-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~-----------------~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP-----------------KKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC-----------------CCCCCHH
Confidence 57899999999999999999999998877766655544321100000111111100 0112233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-Ccc--HHHhhccCEEecCCChhHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DAT--DAARSASDIVLTEPGLSVI 632 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~gt--d~ak~aADivL~~~~~~~i 632 (875)
-=..+.+.+.-....+.|+||+.+|..|-++|++....- .|. .-....+|+++ +++..+
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l 268 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDV 268 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhc
Confidence 223344444444556999999999999999999765442 332 11123578877 444443
No 117
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.79 E-value=0.036 Score=52.46 Aligned_cols=92 Identities=16% Similarity=0.162 Sum_probs=62.6
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCC--------HHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhC
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKA 562 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~--------~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (875)
-++.|++.+++++|+++|+++.++|+.. .....++.+.+|+.... ....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-~----------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-H----------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-C-----------------
Confidence 3678999999999999999999999988 67777888888874210 00100 0
Q ss_pred cEEEEeCHHHHHHHHHHHh-hCCCEEEEEcC-CccCHHHHhhCCc
Q 002832 563 DGFAGVFPEHKYEIVKRLQ-ARKHICGMTGD-GVNDAPALKKADI 605 (875)
Q Consensus 563 ~vfar~sP~~K~~iV~~lq-~~g~~Vam~GD-G~NDapALk~AdV 605 (875)
..+-.|+-=..+.+.++ -..+.+.|+|| -.+|..+-++|++
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 01112222234444442 34467999999 5899999998875
No 118
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.76 E-value=0.034 Score=57.67 Aligned_cols=121 Identities=11% Similarity=0.066 Sum_probs=74.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
+++|++.+.+++|++. +++.++|+-....+..+-++.|+.... ..++.+.+.. ..+-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDAG-----------------IQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCccC-----------------CCCCCHH
Confidence 5789999999999999 999999999888888888888885321 1121111100 0111122
Q ss_pred HHHHHHHHH-hhCCCEEEEEcCCc-cCHHHHhhCCc-eEEecC--ccHHHhhccCEEecCCChhHHHH
Q 002832 572 HKYEIVKRL-QARKHICGMTGDGV-NDAPALKKADI-GIAVAD--ATDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 572 ~K~~iV~~l-q~~g~~Vam~GDG~-NDapALk~AdV-GIamg~--gtd~ak~aADivL~~~~~~~i~~ 634 (875)
-=....+.+ .-....+.|+||.. +|..+=+++++ +|.... .+......+|.++ ++++.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 112333333 22234689999998 89999999996 333332 2222223466666 44665554
No 119
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.68 E-value=0.031 Score=58.35 Aligned_cols=99 Identities=10% Similarity=-0.015 Sum_probs=65.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH-
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP- 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP- 570 (875)
++.|++.+.++.|++.|+++.++|+-+...+...-+..|+... -..++.+.+. .+-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~iv~s~~~-------------------~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH--LDLLLSTHTF-------------------GYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH--CCEEEEeeeC-------------------CCCCCC
Confidence 6789999999999999999999999888888777777777421 1112211111 11122
Q ss_pred -HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce--EEecC
Q 002832 571 -EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAVAD 611 (875)
Q Consensus 571 -~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG--Iamg~ 611 (875)
+-=....+.+.-....+.|+||..+|..|-++|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 221222233333345689999999999999999996 44443
No 120
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.65 E-value=0.059 Score=60.22 Aligned_cols=120 Identities=15% Similarity=0.121 Sum_probs=80.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||..- -..++.+++.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y--Fd~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF--FSVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH--ceEEEecCcCC-----------------CCCCCHH
Confidence 4679999999999999999999999999999999899998532 11222222110 0111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe-cCccHHHh-hccCEEecCCChhHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-ADATDAAR-SASDIVLTEPGLSVI 632 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam-g~gtd~ak-~aADivL~~~~~~~i 632 (875)
-=....+.+.-....+.|+||..+|..|-++|++-... ..+.+... ..||+++ +++..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 33444555554567799999999999999999975332 33332222 3588876 445554
No 121
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.62 E-value=0.039 Score=55.13 Aligned_cols=94 Identities=14% Similarity=0.127 Sum_probs=62.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.+++|++.|+++.++|+-.... ..+..++|+... -..++.+.+.. ...-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~--f~~i~~~~~~~-----------------~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL--FDVVIFSGDVG-----------------RGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH--CCEEEEcCCCC-----------------CCCCCHH
Confidence 678999999999999999999999988776 555555777421 11122111110 1111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI 605 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV 605 (875)
-=..+.+.+.-....+.|+||...|..|-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 3344444444445678999999999999888876
No 122
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.62 E-value=0.011 Score=58.17 Aligned_cols=97 Identities=16% Similarity=0.179 Sum_probs=68.7
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++.|++.+.+++|++.|++++++|+-+........+++|+..- ...++...+... .+-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~~-----------------~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVGS-----------------RKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSSS-----------------STTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhhh-----------------hhhHH
Confidence 36789999999999999999999999999999999999998521 122222221110 01112
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
+-=..+.+.+.-..+.+.|+||..+|..+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 333445555554556799999999999999988864
No 123
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.43 E-value=0.035 Score=57.81 Aligned_cols=103 Identities=22% Similarity=0.254 Sum_probs=67.2
Q ss_pred CCCCChHHHHHHH--HhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccc-cccc--cCCcccHHHHhhhCcEEE
Q 002832 492 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ-NKDE--SIVALPVDELIEKADGFA 566 (875)
Q Consensus 492 ~lr~~~~~~I~~l--~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~vfa 566 (875)
|+.|+.++.++.| ++.|+.++++|--|..--..+=+.-|+.... ..+.+.. ..+. .+.-.+... +-+.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f--~~I~TNpa~~~~~G~l~v~pyh~-----h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF--SEIFTNPACFDADGRLRVRPYHS-----HGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc--ceEEeCCceecCCceEEEeCccC-----CCCC
Confidence 7789999999999 5689999999999987777777777875321 1122111 0110 000001111 1244
Q ss_pred EeCH-HHHHHHHHHHhhC----C---CEEEEEcCCccC-HHHHh
Q 002832 567 GVFP-EHKYEIVKRLQAR----K---HICGMTGDGVND-APALK 601 (875)
Q Consensus 567 r~sP-~~K~~iV~~lq~~----g---~~Vam~GDG~ND-apALk 601 (875)
+|.| .=|..+++.+++. | ..|.++|||.|| ||+++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 5655 4799999988865 4 689999999999 56654
No 124
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.30 E-value=0.029 Score=56.29 Aligned_cols=92 Identities=13% Similarity=0.117 Sum_probs=59.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|++.|+++.++|+- ..+..+-+..|+..-. ..++.+.+. .+..|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~~-------------------~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADEV-------------------KEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhhC-------------------CCCCCC
Confidence 68999999999999999999999986 5566777778874210 111111110 011232
Q ss_pred HH--HHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 572 HK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 572 ~K--~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
.. ....+.+.-..+.+.|+||..+|..+-++|++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11 122233322335588999999999999999874
No 125
>PRK09449 dUMP phosphatase; Provisional
Probab=95.21 E-value=0.076 Score=55.23 Aligned_cols=123 Identities=14% Similarity=0.097 Sum_probs=74.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+++++|+ .|+++.++|+.....+...-++.|+.... ..++.+.+.. ...-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~~-----------------~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQVG-----------------VAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECccC-----------------CCCCCHH
Confidence 47899999999999 68999999998888887777778874210 1111111110 0011122
Q ss_pred HHHHHHHHHhhC-CCEEEEEcCCc-cCHHHHhhCCce-EEec-CccH-HHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQAR-KHICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~-g~~Vam~GDG~-NDapALk~AdVG-Iamg-~gtd-~ak~aADivL~~~~~~~i~~~i 636 (875)
-=..+++.+.-. .+.+.|+||.. +|..+=++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 222333333321 24699999998 799999999985 4443 2221 1112467777 4566666543
No 126
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.20 E-value=0.11 Score=51.01 Aligned_cols=102 Identities=16% Similarity=0.229 Sum_probs=65.6
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHH---HHHHHh---C--CCCCCCCCcccccccccccCCcccHHHHhhh
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSSALLGQNKDESIVALPVDELIEK 561 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~---~ia~~l---G--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (875)
+|.+.|+++++++++++.|++++.+||.....+. ....++ | ++. ..++....- .... ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g~-------~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPDR-------LFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCCc-------chhh-hhc
Confidence 4788999999999999999999999999987764 444442 2 321 111110000 0000 000
Q ss_pred CcEEEEeCHH-HHHHHHHHHhh-----CCCEEEEEcCCccCHHHHhhCCc
Q 002832 562 ADGFAGVFPE-HKYEIVKRLQA-----RKHICGMTGDGVNDAPALKKADI 605 (875)
Q Consensus 562 ~~vfar~sP~-~K~~iV~~lq~-----~g~~Vam~GDG~NDapALk~AdV 605 (875)
.+. .-.|+ .|...++.+++ ....++..||+.+|+.|-++++|
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 112 22343 48888887776 34678889999999999988765
No 127
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.20 E-value=0.06 Score=53.59 Aligned_cols=108 Identities=7% Similarity=-0.054 Sum_probs=67.8
Q ss_pred EeccCCCCCCChHHHHHHHHhCCCcEEEEcCC-CHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcE
Q 002832 486 LMPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADG 564 (875)
Q Consensus 486 ~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 564 (875)
...-+-+++|++.+.++.|+++|+++.++|+- ....+..+-..+|+..... ...+....+ ..+
T Consensus 39 ~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd-~iv 102 (174)
T TIGR01685 39 KSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD-DRI 102 (174)
T ss_pred CCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-eee
Confidence 33444568899999999999999999999965 8888888888888741000 000000000 001
Q ss_pred EEEeCHHHH--HHHHHHHhhC------CCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 565 FAGVFPEHK--YEIVKRLQAR------KHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 565 far~sP~~K--~~iV~~lq~~------g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
.+.-.+..| ..+.+.+.+. -..+.|+||...|+.|-++|++-...
T Consensus 103 ~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 103 EIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 111111112 2344544432 25689999999999999999876544
No 128
>PLN02940 riboflavin kinase
Probab=95.08 E-value=0.072 Score=60.25 Aligned_cols=114 Identities=18% Similarity=0.160 Sum_probs=70.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHH-HhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR-RLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~-~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
++.|++.+.++.|++.|+++.++|+-....+...-+ ..|+... -..++.+++.. ...-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~--Fd~ii~~d~v~-----------------~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES--FSVIVGGDEVE-----------------KGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh--CCEEEehhhcC-----------------CCCCCH
Confidence 467999999999999999999999998877766554 5666321 11122211110 011122
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-ecCc--cHHHhhccCEEe
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VADA--TDAARSASDIVL 624 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-mg~g--td~ak~aADivL 624 (875)
+-=.+..+.+.-..+.+.|+||..+|..|-++|++-.. +..+ .+.....+|.++
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 32233344444345679999999999999999997643 3332 222333466655
No 129
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.98 E-value=0.13 Score=51.44 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=24.0
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCC
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQ 518 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~ 518 (875)
+.|++.+++++|+++|+++.++|.-+
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999999999999999765
No 130
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=94.87 E-value=0.12 Score=54.81 Aligned_cols=45 Identities=27% Similarity=0.320 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHH
Q 002832 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDA 615 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ 615 (875)
..|..-|+.|+++ | +.|..+||..||.+||..++-||.++++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 5799999988875 2 3466799999999999999999999987776
No 131
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.84 E-value=0.15 Score=49.19 Aligned_cols=109 Identities=12% Similarity=0.181 Sum_probs=76.1
Q ss_pred HHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhC
Q 002832 451 IDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (875)
Q Consensus 451 ~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG 530 (875)
.+.+.++|.+.+.+-..+ +++..= ....-|++++=+++++.+|+++.++|.-++..+...++.+|
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 567889999998775443 333321 12356788888999999999999999999999999999999
Q ss_pred CCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhC---CCEEEEEcCCc-cCHHHHhhCCc
Q 002832 531 MGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQAR---KHICGMTGDGV-NDAPALKKADI 605 (875)
Q Consensus 531 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~---g~~Vam~GDG~-NDapALk~AdV 605 (875)
++- ++--..|-- ..+-+++++. -+.|+|+||-. .|+-+=+.|++
T Consensus 85 v~f------------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 85 VPF------------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred Cce------------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 852 111122333 2345666655 45799999986 67766555543
No 132
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.75 E-value=0.069 Score=51.68 Aligned_cols=97 Identities=19% Similarity=0.203 Sum_probs=58.0
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCCcccccccccccCCcccHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVD 556 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (875)
++.|++.++++.|++.|+++.++|+.+. .....+.+.+|+.... .........+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~~~~~~-------- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG---VLFCPHHPAD-------- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE---EEECCCCCCC--------
Confidence 4789999999999999999999998652 3455566777774110 0000000000
Q ss_pred HHhhhCcEEEEeCHHHH--HHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 557 ELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 557 ~~~~~~~vfar~sP~~K--~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
....+ .|+-+ ..+.+.+.-..+.+.|+||...|..+-++|++-
T Consensus 96 ------~~~~~-KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 96 ------NCSCR-KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ------CCCCC-CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 00001 23221 222233332335699999999999998888764
No 133
>PLN02580 trehalose-phosphatase
Probab=94.50 E-value=0.2 Score=55.96 Aligned_cols=67 Identities=22% Similarity=0.207 Sum_probs=47.5
Q ss_pred EEeCHH---HHHHHHHHHhhC-C-----C-EEEEEcCCccCHHHHhh-----CCceEEecCccHHHhhccCEEecCCChh
Q 002832 566 AGVFPE---HKYEIVKRLQAR-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLS 630 (875)
Q Consensus 566 ar~sP~---~K~~iV~~lq~~-g-----~-~Vam~GDG~NDapALk~-----AdVGIamg~gtd~ak~aADivL~~~~~~ 630 (875)
-.+.|. +|..-|+.+.+. | . .+.++||+.||-.|++. +++||+|++|.... .|++-|-+ -.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~d--p~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLRD--PS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcCC--HH
Confidence 355664 899888877654 2 1 35899999999999996 68999999765433 57787744 45
Q ss_pred HHHHHH
Q 002832 631 VIISAV 636 (875)
Q Consensus 631 ~i~~~i 636 (875)
.+...+
T Consensus 368 eV~~~L 373 (384)
T PLN02580 368 EVMEFL 373 (384)
T ss_pred HHHHHH
Confidence 554444
No 134
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.27 E-value=0.11 Score=53.11 Aligned_cols=94 Identities=14% Similarity=0.075 Sum_probs=57.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++-|++.++++.|++.|+++.++|+-... ....-+.+|+.... ..++...+.. ..+-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~~-----------------~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEVG-----------------AEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeecccC-----------------CCCCCHH
Confidence 57899999999999999999999976554 45666777773211 1111111100 0111222
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCc
Q 002832 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADI 605 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdV 605 (875)
-=..+.+.+.-....+.|+||.. +|..+-++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 11223333333345799999997 89998888875
No 135
>PTZ00174 phosphomannomutase; Provisional
Probab=94.20 E-value=0.034 Score=58.95 Aligned_cols=54 Identities=22% Similarity=0.281 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhCCCEEEEEcC----CccCHHHHhhC-CceEEecCccHHHhhccCEEe
Q 002832 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 624 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GD----G~NDapALk~A-dVGIamg~gtd~ak~aADivL 624 (875)
-+|..-++.|.+..+-|+.+|| |-||.+||+.| -.|++++++++..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 5799999998887788999999 99999999987 688999999999998776543
No 136
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.01 E-value=0.14 Score=50.97 Aligned_cols=108 Identities=12% Similarity=0.134 Sum_probs=70.3
Q ss_pred HHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCC-HHHHHHHHHHhCCC
Q 002832 454 FAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ-LAIAKETGRRLGMG 532 (875)
Q Consensus 454 ~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~ 532 (875)
+.+.|.+.+.+-... ++.- .=...+-|++.+++++|++.|+++.++|+-+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~~--~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLVY--PDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------cccc--CCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 445788887776432 1110 0123578999999999999999999999987 57777777877763
Q ss_pred CCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH--HHHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCce
Q 002832 533 TNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP--EHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG 606 (875)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP--~~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdVG 606 (875)
.. +....| +-=..+.+.+.-....+.|+||.. .|..+-++|++-
T Consensus 85 ~~------------------------------~~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 VL------------------------------PHAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EE------------------------------cCCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 10 000122 211122222222344599999998 799999999873
No 137
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.82 E-value=0.55 Score=49.52 Aligned_cols=94 Identities=16% Similarity=0.193 Sum_probs=59.2
Q ss_pred EEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHH--HHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhC
Q 002832 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK--ETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKA 562 (875)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~--~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (875)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. +..+++|+..+. ...++
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii--------------------- 74 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMII--------------------- 74 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEE---------------------
Confidence 555566788999999999999999999999985543333 455777875310 01111
Q ss_pred cEEEEeCHHHHHHHHHHHhh---CCCEEEEEcCCccCHHHHhhCC
Q 002832 563 DGFAGVFPEHKYEIVKRLQA---RKHICGMTGDGVNDAPALKKAD 604 (875)
Q Consensus 563 ~vfar~sP~~K~~iV~~lq~---~g~~Vam~GDG~NDapALk~Ad 604 (875)
+.- ......+.+.+++ .+..+.++||+.+|...+..++
T Consensus 75 ---~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 75 ---SSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ---ccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 100 0001122222333 2467999999999998886543
No 138
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.75 E-value=0.085 Score=51.22 Aligned_cols=91 Identities=20% Similarity=0.163 Sum_probs=56.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
+..+++.+.++.|++.|+++.++|+-....+...-+.. +... ...++..++ +..+-.|+
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~--f~~i~~~~~------------------~~~Kp~~~ 122 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY--FDLILGSDE------------------FGAKPEPE 122 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc--CcEEEecCC------------------CCCCcCHH
Confidence 34589999999999999999999999988888777764 3211 011111100 01111222
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCC
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~Ad 604 (875)
-=..+.+.+.-.. .+.|+||..+|..|-++|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 2222233333234 6899999999999887764
No 139
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=93.72 E-value=0.12 Score=50.80 Aligned_cols=99 Identities=14% Similarity=0.044 Sum_probs=58.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVD 556 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (875)
++-|++.+++++|++.|+++.++|.- ....+..+.+..|+.- ...+.+.... ..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f----d~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF----DDVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce----eEEEECCCCC----CC---
Confidence 46789999999999999999999974 2345566677777741 0111110000 00
Q ss_pred HHhhhCcEEEEeCHHHH--HHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE
Q 002832 557 ELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 557 ~~~~~~~vfar~sP~~K--~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
.... ..|... ..+.+.+.-....+.|+||+.+|..+-++|++-..
T Consensus 98 ------~~~~-~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 ------NCDC-RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ------CCCC-CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0001 123211 12222222122458999999999999999987644
No 140
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.29 E-value=0.35 Score=51.57 Aligned_cols=86 Identities=15% Similarity=0.104 Sum_probs=57.3
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCH---HHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEE
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQL---AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~---~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfa 566 (875)
..++-|++.+.++.+++.|+++.++|+-.. ..+...-++.|+...... .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-------------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-------------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-------------------------eEEe
Confidence 346789999999999999999999999763 333345566787532111 1222
Q ss_pred EeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHH
Q 002832 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600 (875)
Q Consensus 567 r~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapAL 600 (875)
|-....|..-.+.+.+...+++++||-.+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 2112235555555655667899999999997643
No 141
>PLN02811 hydrolase
Probab=93.28 E-value=0.19 Score=52.20 Aligned_cols=98 Identities=13% Similarity=0.118 Sum_probs=57.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHH-HHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeC-
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKE-TGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF- 569 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~-ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~s- 569 (875)
++.|++.+.|+.|++.|+++.++||-+...... ..+..|+..- ...++.+.+.+ +.+..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~--f~~i~~~~~~~-----------------~~~~KP 138 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL--MHHVVTGDDPE-----------------VKQGKP 138 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh--CCEEEECChhh-----------------ccCCCC
Confidence 578999999999999999999999987643322 2222233210 01112111000 01111
Q ss_pred -HHHHHHHHHHHh---hCCCEEEEEcCCccCHHHHhhCCceEE
Q 002832 570 -PEHKYEIVKRLQ---ARKHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 570 -P~~K~~iV~~lq---~~g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
|+-=...++.+. -..+-+.|+||...|+.|-++|++-..
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 222223334342 223569999999999999999997543
No 142
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=92.97 E-value=0.11 Score=50.33 Aligned_cols=93 Identities=17% Similarity=0.019 Sum_probs=64.2
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
-++||++.+.++.|+ .++++.++|.-+...+..+-+.+|+... ....++.+++.. +..|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~~-------------------~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDECV-------------------FVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcccc-------------------ccCC
Confidence 357999999999999 5799999999999999999998887421 111222222111 1122
Q ss_pred HHHHHHHHHHhh---CCCEEEEEcCCccCHHHHhhCCceEE
Q 002832 571 EHKYEIVKRLQA---RKHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 571 ~~K~~iV~~lq~---~g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
. +.+.+++ ..+.+.|+||..+|..|-++|.|-|.
T Consensus 103 ~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 103 K----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred e----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 2 3444443 34679999999999998877766554
No 143
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=92.83 E-value=0.22 Score=55.34 Aligned_cols=97 Identities=12% Similarity=0.066 Sum_probs=58.1
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPV 555 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~ 555 (875)
-++.|++.+++++|+++|+++.++|+= ....+..+.+..|+.- ..++.+.... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f----d~i~i~~~~~----sd-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF----DEVLICPHFP----ED-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce----eeEEEeCCcC----cc--
Confidence 367999999999999999999999982 1234555666666631 0111100000 00
Q ss_pred HHHhhhCcEEEEeCHHHHHHHHHH-Hhh---CCCEEEEEcCCccCHHHHhhCCceE
Q 002832 556 DELIEKADGFAGVFPEHKYEIVKR-LQA---RKHICGMTGDGVNDAPALKKADIGI 607 (875)
Q Consensus 556 ~~~~~~~~vfar~sP~~K~~iV~~-lq~---~g~~Vam~GDG~NDapALk~AdVGI 607 (875)
...+| .|+ -.++.. +++ ....+.|+||+.+|..+-+.|++-.
T Consensus 99 -------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 -------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred -------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 00011 232 222322 222 2367999999999999999998754
No 144
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=92.25 E-value=0.22 Score=52.70 Aligned_cols=66 Identities=21% Similarity=0.207 Sum_probs=47.3
Q ss_pred EeCHHHHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhC--------CceEEecCccHHHhhccCEEecCCChhHHHH
Q 002832 567 GVFPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 567 r~sP~~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~A--------dVGIamg~gtd~ak~aADivL~~~~~~~i~~ 634 (875)
+-.+.+|...++.+.+. ...+.|+||+.||.+|++.+ ..||+|+.|. .+..|++++. +...+..
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~ 237 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLE 237 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHH
Confidence 34456788877776544 34789999999999999999 4788886443 3567888884 4565555
Q ss_pred HH
Q 002832 635 AV 636 (875)
Q Consensus 635 ~i 636 (875)
.+
T Consensus 238 ~L 239 (244)
T TIGR00685 238 FL 239 (244)
T ss_pred HH
Confidence 44
No 145
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.20 E-value=0.36 Score=50.12 Aligned_cols=99 Identities=12% Similarity=0.049 Sum_probs=64.1
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhC---CCCCCCCCcccccccccccCCcccHHHHhhhCcEEE
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG---MGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfa 566 (875)
+-++.||+.+++++|+++|+++.++|..+......+-+..+ +..- +. ... +..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f~--------------~~f-d~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------FS--------------GYF-DTTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------cc--------------eEE-EeCccc
Confidence 35789999999999999999999999988776666554432 2110 00 000 001111
Q ss_pred EeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 567 r~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
.-.|+-=..+.+.+.-..+.+.|+||...|+.|-++|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 2223333444455544446689999999999999999986543
No 146
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=92.15 E-value=0.52 Score=48.90 Aligned_cols=87 Identities=18% Similarity=0.267 Sum_probs=55.2
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHH---HHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---AKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t---A~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
-|.-|++.++++.+++.|++|+++||..... ..+--++.|+.. .....+.+.+-+ ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~------------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS------------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC------------------Cc
Confidence 3788999999999999999999999999644 222223457642 111122111000 00
Q ss_pred eCHHHHHHHHHHHhhCCC-EEEEEcCCccCH
Q 002832 568 VFPEHKYEIVKRLQARKH-ICGMTGDGVNDA 597 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~-~Vam~GDG~NDa 597 (875)
..-+-|...=+.+.+.|+ +++.+||-.+|-
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 011227676667777765 679999999985
No 147
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=91.53 E-value=0.93 Score=58.10 Aligned_cols=115 Identities=16% Similarity=0.174 Sum_probs=76.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH-
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP- 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP- 570 (875)
.+.|++.+.+++|+++|+++.++|+-....+..+-++.|+.... -..++.+++ +.+..|
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~-Fd~iv~~~~-------------------~~~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM-FDAIVSADA-------------------FENLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH-CCEEEECcc-------------------cccCCCC
Confidence 36799999999999999999999999888888888888884110 112222211 112223
Q ss_pred -HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecCc---cHHHhhccCEEecC
Q 002832 571 -EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADA---TDAARSASDIVLTE 626 (875)
Q Consensus 571 -~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~g---td~ak~aADivL~~ 626 (875)
+-=.+..+.+.-..+.+.|+||..+|+.|-++|++ -|++..+ .+.....+|+++-+
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 22233444444445678999999999999999997 3334332 33344567888844
No 148
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=91.50 E-value=0.49 Score=44.58 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=34.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCC-CHHHHHHHHHHhC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLG 530 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lG 530 (875)
++.|++.+.++.|++.|+++.++|+- .+..+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777666665
No 149
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=91.42 E-value=0.93 Score=45.34 Aligned_cols=50 Identities=22% Similarity=0.355 Sum_probs=41.7
Q ss_pred eEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHH---HhCC
Q 002832 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR---RLGM 531 (875)
Q Consensus 482 ~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~---~lGi 531 (875)
.+-|.+.++|..-|++.++++.|++++.+|.-+|.-..+.-+.+.+ +||+
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 4669999999999999999999999999999999877665555554 4565
No 150
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=91.04 E-value=0.6 Score=46.03 Aligned_cols=102 Identities=18% Similarity=0.208 Sum_probs=72.5
Q ss_pred HHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCc--EEEEcCC-------CHHHHHH
Q 002832 454 FAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVN--VKMITGD-------QLAIAKE 524 (875)
Q Consensus 454 ~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~--v~miTGD-------~~~tA~~ 524 (875)
+.+.|.|.+.+-... ++. .-=++.+-|+..+.+++|++.+.. |.++|.- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL~--~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TLT--PPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CCC--CCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 677888888775433 110 123567889999999999999875 9999976 4788999
Q ss_pred HHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhC-----CCEEEEEcCCc-cCHH
Q 002832 525 TGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQAR-----KHICGMTGDGV-NDAP 598 (875)
Q Consensus 525 ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~-----g~~Vam~GDG~-NDap 598 (875)
+.+.+|+.- + .+..-.|.-..++.+.++.+ -+.++|+||-. .|.-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999841 0 12234576666788888755 55699999974 4554
Q ss_pred H
Q 002832 599 A 599 (875)
Q Consensus 599 A 599 (875)
+
T Consensus 152 ~ 152 (168)
T PF09419_consen 152 M 152 (168)
T ss_pred H
Confidence 4
No 151
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=90.85 E-value=0.25 Score=50.83 Aligned_cols=97 Identities=13% Similarity=0.033 Sum_probs=55.4
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHH--HHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEe
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--AKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t--A~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (875)
-++.|++.+.+++|++.|+++.++|+..... ........++.... ..++...+.. ..+-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f--d~v~~s~~~~-----------------~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF--DAVVESCLEG-----------------LRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC--CEEEEeeecC-----------------CCCC
Confidence 3678999999999999999999999865432 22222223332110 0111100000 0111
Q ss_pred CHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 569 sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
.|+-=..+.+.+.-....+.|+||...|+.+=++|++-
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 22222233333333345688999999999999999874
No 152
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=90.45 E-value=0.82 Score=45.21 Aligned_cols=40 Identities=8% Similarity=0.029 Sum_probs=31.5
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCH------------HHHHHHHHHhCCC
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQL------------AIAKETGRRLGMG 532 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~------------~tA~~ia~~lGi~ 532 (875)
+-|++.+++++|+++|+++.++|.-.. .....+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 348999999999999999999997543 2345667777873
No 153
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=90.18 E-value=1.1 Score=55.86 Aligned_cols=67 Identities=9% Similarity=0.143 Sum_probs=45.2
Q ss_pred HHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHH-HhCCCcEEEEcCCCHHHHHHHHH
Q 002832 449 AIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIAKETGR 527 (875)
Q Consensus 449 ~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l-~~aGI~v~miTGD~~~tA~~ia~ 527 (875)
...+.|.....|.+++-|.. |++-.....-.+-++..+++++| ++.|+.|.++||....+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 33445555566777666544 44322222235667899999997 78899999999999988776654
Q ss_pred H
Q 002832 528 R 528 (875)
Q Consensus 528 ~ 528 (875)
.
T Consensus 653 ~ 653 (854)
T PLN02205 653 P 653 (854)
T ss_pred C
Confidence 3
No 154
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=89.21 E-value=0.93 Score=46.14 Aligned_cols=97 Identities=8% Similarity=-0.007 Sum_probs=56.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHH-HHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG-RRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia-~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
++.|++.+++++|++.|+++.++|.-+.......- +..++... -..++...+.. ...-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~--fd~v~~s~~~~-----------------~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA--ADHIYLSQDLG-----------------MRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh--cCEEEEecccC-----------------CCCCCH
Confidence 46899999999999999999999987655443221 11233110 00111111100 001112
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGI 607 (875)
+-=..+.+.+.-....+.|+||...|..+-++|++-.
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 2222333444334456899999999999999988853
No 155
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=89.16 E-value=2.8 Score=42.49 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=32.3
Q ss_pred ChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002832 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (875)
Q Consensus 496 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (875)
.+.+.+.+|+++|++|+.+|.-...--...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5788999999999999999998887777777888875
No 156
>PLN03017 trehalose-phosphatase
Probab=88.86 E-value=7.5 Score=43.31 Aligned_cols=61 Identities=8% Similarity=0.007 Sum_probs=42.7
Q ss_pred HHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCC--CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHH
Q 002832 452 DKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFD--PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG 526 (875)
Q Consensus 452 ~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D--~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia 526 (875)
..+++...+++++-|.. |++-++.-.| .+-++..++|++|. .|+++.++||.......+..
T Consensus 104 ~~~~~~k~~llflD~DG-------------TL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 104 MEASRGKQIVMFLDYDG-------------TLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred HHHhcCCCeEEEEecCC-------------cCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 33444445555555543 5554444333 36789999999999 78999999999998888773
No 157
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=88.22 E-value=1.1 Score=46.39 Aligned_cols=97 Identities=11% Similarity=0.141 Sum_probs=61.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|+++++++.| ++++.++|+.....+...=+..|+.... ...++.+.+.. ..+-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 5678999999998 4899999999888777777777774321 01122221110 0011122
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
-=....+.+.-..+.++|+||..+|..+=++|++-...
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 22333333333335589999999999999999987653
No 158
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=87.90 E-value=2.9 Score=42.45 Aligned_cols=116 Identities=18% Similarity=0.196 Sum_probs=67.1
Q ss_pred CCCCChHHHHHHHHhCCC-cEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccc-cccc--cCCcccHHHHhhhCcEEEE
Q 002832 492 PPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ-NKDE--SIVALPVDELIEKADGFAG 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~vfar 567 (875)
|+-|+..++|+.+++.|- .++++|--|.---..+-+..|+.+- -..+.+.. ..|. .+.-.+.. .-+-+.|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~--F~~IfTNPa~~da~G~L~v~pyH----~~hsC~~ 157 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDL--FSEIFTNPACVDASGRLLVRPYH----TQHSCNL 157 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHH--HHHHhcCCcccCCCCcEEeecCC----CCCccCc
Confidence 778999999999999996 9999998887665666666665210 00000000 0000 00000000 0012344
Q ss_pred eCH-HHHHHHHHHHhhCC-------CEEEEEcCCccC-HHHHhhCCceEEec-Ccc
Q 002832 568 VFP-EHKYEIVKRLQARK-------HICGMTGDGVND-APALKKADIGIAVA-DAT 613 (875)
Q Consensus 568 ~sP-~~K~~iV~~lq~~g-------~~Vam~GDG~ND-apALk~AdVGIamg-~gt 613 (875)
|-| -=|..++..++..+ +.+-++|||.|| ||.++...--+||- .|-
T Consensus 158 CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgf 213 (256)
T KOG3120|consen 158 CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGF 213 (256)
T ss_pred CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCC
Confidence 433 23777766665432 278999999999 68887776666774 443
No 159
>PLN02645 phosphoglycolate phosphatase
Probab=87.64 E-value=1.3 Score=48.72 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=38.8
Q ss_pred EEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHH---HHhCCC
Q 002832 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG---RRLGMG 532 (875)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 532 (875)
|.+.-.+.+=|++.++|++|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555556677799999999999999999999999966666666 456763
No 160
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=86.48 E-value=1.4 Score=48.51 Aligned_cols=91 Identities=13% Similarity=0.069 Sum_probs=65.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH----hCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR----LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~----lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
++.+++.+++++|++.|+++.++|.-+...|..+-++ +|+.... .+.+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 4578999999999999999999999999999998887 6663210 0111
Q ss_pred eCHHHHHHHHH----HHhhCCCEEEEEcCCccCHHHHhhCCceEEec
Q 002832 568 VFPEHKYEIVK----RLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (875)
Q Consensus 568 ~sP~~K~~iV~----~lq~~g~~Vam~GDG~NDapALk~AdVGIamg 610 (875)
..+..|..-++ .+.-.-..++|+||...|..+.+++..++.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 22233444333 33323467999999999999999999886554
No 161
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=85.43 E-value=1.8 Score=43.43 Aligned_cols=93 Identities=15% Similarity=0.156 Sum_probs=59.6
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHH
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH 572 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 572 (875)
+-| ..+.++.|++. ++..++||.....+...-++.|+.... ..++.+++.. ..+-.|+-
T Consensus 89 ~~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~~ 147 (188)
T PRK10725 89 PLP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDVQ-----------------HHKPAPDT 147 (188)
T ss_pred Ccc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhcc-----------------CCCCChHH
Confidence 345 46899999865 899999999999999988889885321 1222221110 11112332
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 573 K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
=....+.++-....+.|+||..+|+.+=++|++-
T Consensus 148 ~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 148 FLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 2333344443334578999999999999999864
No 162
>PHA02597 30.2 hypothetical protein; Provisional
Probab=83.38 E-value=3.5 Score=41.78 Aligned_cols=91 Identities=14% Similarity=0.126 Sum_probs=53.0
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCC--CCCcccccccccccCCcccHHHHhhhCcEEEEeC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM--YPSSALLGQNKDESIVALPVDELIEKADGFAGVF 569 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~s 569 (875)
++.|++.+++++|++.+ +.+++|.-+..+....-+.+|+..-. .-..++ .++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~-----------------------~~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVL-----------------------MCGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEE-----------------------EeccC
Confidence 47899999999999875 66677764444433344555553100 000111 11111
Q ss_pred HHHHHHHH-HHHhhCC-CEEEEEcCCccCHHHHhhC--CceE
Q 002832 570 PEHKYEIV-KRLQARK-HICGMTGDGVNDAPALKKA--DIGI 607 (875)
Q Consensus 570 P~~K~~iV-~~lq~~g-~~Vam~GDG~NDapALk~A--dVGI 607 (875)
.. |-+++ +.+++.| +.++|+||..+|..|-++| ++-.
T Consensus 130 ~~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 130 ES-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred cc-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 11 22333 2333334 4588999999999999999 8853
No 163
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=83.06 E-value=1.5 Score=43.93 Aligned_cols=97 Identities=12% Similarity=0.083 Sum_probs=60.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.+++.+++++|+ .++.++|+-+...+...-++.|+.... ..++.+.+.... ...+.-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF--DGIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh--CeEEEeecccCc-------------cCCCCCCHH
Confidence 46789999999997 479999998888888888888884311 112211111000 000011222
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
-=..+.+.+......+.|+||...|..+=++|++-
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 22344444544456788999999999998888764
No 164
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=82.12 E-value=0.8 Score=41.19 Aligned_cols=48 Identities=19% Similarity=0.272 Sum_probs=35.5
Q ss_pred EEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHH---HHhCCC
Q 002832 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG---RRLGMG 532 (875)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 532 (875)
|.+.-.+.+=|++.++|+.|+++|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 556667888999999999999999999999988744433333 557775
No 165
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=77.95 E-value=3.1 Score=43.52 Aligned_cols=89 Identities=21% Similarity=0.184 Sum_probs=55.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHH---HHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEe
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLA---IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~---tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (875)
|.=|++.+.++.+++.|++|..|||.+.. ....=-++.|.... ....+.+..... ...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~~-----------------~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDPS-----------------KKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESSTS-----------------S--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhccccccccc-----------------ccc
Confidence 55578999999999999999999998742 22233345676421 111121111000 000
Q ss_pred CHHHHHHHHHHHhhCCC-EEEEEcCCccCHHH
Q 002832 569 FPEHKYEIVKRLQARKH-ICGMTGDGVNDAPA 599 (875)
Q Consensus 569 sP~~K~~iV~~lq~~g~-~Vam~GDG~NDapA 599 (875)
..+-|...-+.++++|+ +++++||-.+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 12347787888888854 78999999999765
No 166
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=77.44 E-value=22 Score=38.22 Aligned_cols=48 Identities=21% Similarity=0.230 Sum_probs=35.3
Q ss_pred EEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHH---HHHHhCCC
Q 002832 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKE---TGRRLGMG 532 (875)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~---ia~~lGi~ 532 (875)
|.+.-.+.+=|++.++|++|++.|++++.+||....+... --+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4555567788899999999999999999999965432222 22456764
No 167
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=74.51 E-value=7.9 Score=40.17 Aligned_cols=98 Identities=15% Similarity=0.152 Sum_probs=70.8
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++.|++.+.+++|++.|+.+.+.|+-+...+..+-+.+|+... ....+.+.+... .+-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~--f~~~v~~~dv~~-----------------~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDY--FDVIVTADDVAR-----------------GKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhh--cchhccHHHHhc-----------------CCCCC
Confidence 47899999999999999999999999999999999999998532 112222222111 12234
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGI 607 (875)
+-=+.-.+.|.-....+..+.|..|...|-++|+.-+
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 5445555555445567889999999999999998654
No 168
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=72.70 E-value=15 Score=39.05 Aligned_cols=88 Identities=20% Similarity=0.235 Sum_probs=53.6
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHH----HHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEE
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLA----IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF 565 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~----tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vf 565 (875)
+.|.=|++.+..+.+++.|++|+.+||.... |...+. +.|.... ....+.+.. |. .
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~-kaGy~~~--~~LiLR~~~-D~-----~----------- 202 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLK-KAGYHTW--EKLILKDPQ-DN-----S----------- 202 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHH-HcCCCCc--ceeeecCCC-CC-----c-----------
Confidence 3567789999999999999999999999853 444442 3576421 111221110 00 0
Q ss_pred EEeCHHHHHHHHHHHhhCCC-EEEEEcCCccCH
Q 002832 566 AGVFPEHKYEIVKRLQARKH-ICGMTGDGVNDA 597 (875)
Q Consensus 566 ar~sP~~K~~iV~~lq~~g~-~Vam~GDG~NDa 597 (875)
.....+-|...=+.+.+.|+ +++.+||-.+|-
T Consensus 203 ~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 203 AENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred cchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 00012345444455556665 789999999995
No 169
>PRK10444 UMP phosphatase; Provisional
Probab=71.26 E-value=3.8 Score=43.38 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=39.8
Q ss_pred EEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh
Q 002832 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (875)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (875)
|.+.-.+.+=|++.++|+.|++.|++++++||....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666677888999999999999999999999999988777777765
No 170
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=70.37 E-value=6.6 Score=42.20 Aligned_cols=41 Identities=10% Similarity=0.073 Sum_probs=37.3
Q ss_pred CC-CChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 002832 493 PR-HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (875)
Q Consensus 493 lr-~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (875)
+| |++.+++++|+++|+++.++|+-....+.+.-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 67 999999999999999999999888888888889999964
No 171
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=69.86 E-value=5.1 Score=42.69 Aligned_cols=48 Identities=25% Similarity=0.359 Sum_probs=36.4
Q ss_pred EEeccCCC----CCCChHHHHHHHHhCCCcEEEEcCCCHHH---HHHHHHHhCCC
Q 002832 485 GLMPLFDP----PRHDSAETIRRALNLGVNVKMITGDQLAI---AKETGRRLGMG 532 (875)
Q Consensus 485 G~i~~~D~----lr~~~~~~I~~l~~aGI~v~miTGD~~~t---A~~ia~~lGi~ 532 (875)
|.+.-.+. +=|++.++|++|+++|++++++||.+..+ ....-+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555566 78899999999999999999999977654 33334456764
No 172
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=69.10 E-value=9 Score=40.19 Aligned_cols=91 Identities=12% Similarity=0.084 Sum_probs=53.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++-||+.+++++|++. +++.++|.-+... +..|+.... ..++...+ +.+..|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f--d~i~~~~~-------------------~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF--EFVLRAGP-------------------HGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh--ceeEeccc-------------------CCcCCCc
Confidence 4678999999999975 8999999865431 445653210 11111111 0111232
Q ss_pred H--HHHHHHHHhhCCCEEEEEcCC-ccCHHHHhhCCceEEe
Q 002832 572 H--KYEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIAV 609 (875)
Q Consensus 572 ~--K~~iV~~lq~~g~~Vam~GDG-~NDapALk~AdVGIam 609 (875)
- =....+.+.-..+.+.|+||. ..|..+=++|++-...
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 1 122223333334569999999 5999999999876544
No 173
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=69.01 E-value=48 Score=42.36 Aligned_cols=200 Identities=14% Similarity=0.132 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----CCcEEEE-----ECCeEEEEecCCcCCCcEEEEecCCccccc
Q 002832 100 FVGIVTLLLINSTISFIEENNAGNAAAALMASL-----APKSKVL-----RDGKWMEEDAAILVPGDIISVKLGDIIPAD 169 (875)
Q Consensus 100 ~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~-----~~~~~V~-----rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD 169 (875)
.+++++.++++.+-++.++++.++..+...+.. ..+...+ .-|....+...|.+|.|.+.++. +..=+|
T Consensus 135 l~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g-~~l~Vd 213 (941)
T TIGR01517 135 LVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG-LSLEID 213 (941)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc-CcEEEE
Confidence 344555567777778888877766544332211 1122222 35888999999999999999964 334456
Q ss_pred eEEEecCCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhcccCCCCcHHHHHHHHHH
Q 002832 170 ARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIGN 249 (875)
Q Consensus 170 ~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i~~ 249 (875)
=-.+.|++.-++-. .|+..-+ ..|..+..|+...-=...|.=+.-|.-... +...-.+..-+..+++..+.+..
T Consensus 214 ES~LTGES~pv~K~--~~~~n~v--~~GT~v~~G~~~~iV~~tG~~T~~gki~~~--~~~~~~~t~l~~~~~~~~~~~~~ 287 (941)
T TIGR01517 214 ESSITGESDPIKKG--APKDSFL--LSGTVVNEGSGRMLVTAVGVNSFGGKLMME--LRAEGEDTPLQEKLSELAGLIGK 287 (941)
T ss_pred ecccCCCCCccccc--CCCCceE--EeCCeEEeeEEEEEEEEeCCCcHHHHHHHh--hccCCCCCcHHHHHHHHHHHHHH
Confidence 66666665333222 1332112 345666666532111111111111211110 00000111222334444444443
Q ss_pred HHHH---HHHHHHHHHHHHh------------hhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 002832 250 FCIC---SIAVGMIVEIIVM------------YPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306 (875)
Q Consensus 250 ~~~~---~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~ 306 (875)
+.+. ++++..++..+.. .......+..++..+++.+..++|.+.++++..+....++
T Consensus 288 ~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak 359 (941)
T TIGR01517 288 FGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMK 359 (941)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHh
Confidence 3221 1111111111100 0011223345566667777888888888888888765443
No 174
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=68.67 E-value=7.4 Score=41.88 Aligned_cols=40 Identities=5% Similarity=-0.049 Sum_probs=35.6
Q ss_pred CC-CChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002832 493 PR-HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (875)
Q Consensus 493 lr-~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (875)
+| |++.+++++|+++|+++.++|+-+...+....+.+|+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 46 89999999999999999999977777778888899995
No 175
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=67.96 E-value=9 Score=40.56 Aligned_cols=48 Identities=8% Similarity=-0.004 Sum_probs=38.7
Q ss_pred EEeccCCCCCCChHHHHHHHHhCCCcEEEEcC---CCHHHHHHHHHHhCCC
Q 002832 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIAKETGRRLGMG 532 (875)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTG---D~~~tA~~ia~~lGi~ 532 (875)
|.+.-.+.+=|++.++|++|++.|++++++|| .......+..+++|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 55555677778999999999999999999997 5567667777778874
No 176
>PTZ00445 p36-lilke protein; Provisional
Probab=66.91 E-value=9.3 Score=38.97 Aligned_cols=63 Identities=17% Similarity=0.234 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEE--EeccCCC----------CCCChHHHHHHHHhCCCcE
Q 002832 444 ERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIG--LMPLFDP----------PRHDSAETIRRALNLGVNV 511 (875)
Q Consensus 444 ~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG--~i~~~D~----------lr~~~~~~I~~l~~aGI~v 511 (875)
.+.....++.+.+.|.|++++-+.. |+++ .=|--+| ++|+.+.-+++|+++||+|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 3455566778999999999886543 4333 0012233 7999999999999999999
Q ss_pred EEEcCCCH
Q 002832 512 KMITGDQL 519 (875)
Q Consensus 512 ~miTGD~~ 519 (875)
.++|=-.+
T Consensus 95 ~VVTfSd~ 102 (219)
T PTZ00445 95 SVVTFSDK 102 (219)
T ss_pred EEEEccch
Confidence 99995544
No 177
>PLN02151 trehalose-phosphatase
Probab=65.81 E-value=65 Score=35.89 Aligned_cols=61 Identities=20% Similarity=0.202 Sum_probs=41.5
Q ss_pred HHHHHHHHHhhC-C------CEEEEEcCCccCHHHHhhC-----CceEEecCccHHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQAR-K------HICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~-g------~~Vam~GDG~NDapALk~A-----dVGIamg~gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
+|...|+.+.+. | ..+.++||...|-.|++.. ++||-+|.+.. ...|++-|-+ -..+...+
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~d--p~eV~~~L 341 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQE--PDEVMEFL 341 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCCC--HHHHHHHH
Confidence 788888877654 1 2589999999999998853 67777774321 2267888844 45554444
No 178
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=65.42 E-value=24 Score=41.30 Aligned_cols=98 Identities=16% Similarity=0.118 Sum_probs=62.5
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH-hCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE----
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR-LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG---- 567 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~-lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar---- 567 (875)
+++++.+. +++.| +++++|+=....+..+|++ +|+.. +.|.+++... +-..-.+
T Consensus 111 l~~~a~~~---~~~~g-~~vvVSASp~~~Vepfa~~~LGid~-------VIgTeLev~~----------~G~~TG~i~g~ 169 (497)
T PLN02177 111 VHPETWRV---FNSFG-KRYIITASPRIMVEPFVKTFLGADK-------VLGTELEVSK----------SGRATGFMKKP 169 (497)
T ss_pred cCHHHHHH---HHhCC-CEEEEECCcHHHHHHHHHHcCCCCE-------EEecccEECc----------CCEEeeeecCC
Confidence 56665554 45677 4599999999999999987 89852 1111111000 0001111
Q ss_pred --eCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecC
Q 002832 568 --VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (875)
Q Consensus 568 --~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~ 611 (875)
+.=++|.+-++...........-||..||.|+|+.||-+..++.
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 23467888777443211223578999999999999999999985
No 179
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=65.28 E-value=3.3 Score=40.76 Aligned_cols=41 Identities=17% Similarity=0.075 Sum_probs=37.3
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (875)
=..||++.+.+++|++. .++++.|--....|..+.+.++..
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 35799999999999987 999999999999999999998864
No 180
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=65.08 E-value=21 Score=36.73 Aligned_cols=119 Identities=14% Similarity=0.231 Sum_probs=69.0
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++-|++.++++++++. .++.++|--....+....+++|+.... ..++...+ +....|+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~F--d~v~~s~~-------------------~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYF--DAVFISED-------------------VGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhh--heEEEecc-------------------cccCCCC
Confidence 5678999999999988 999999987777778888889974321 11111111 2233443
Q ss_pred HHHHHHHHHhhC---CCEEEEEcCCc-cCHHHHhhCCc-eEEec-Ccc---HHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQAR---KHICGMTGDGV-NDAPALKKADI-GIAVA-DAT---DAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~---g~~Vam~GDG~-NDapALk~AdV-GIamg-~gt---d~ak~aADivL~~~~~~~i~~~i 636 (875)
.+ -.-..+++. ...+.|+||.. ||...-++++. +|-+. .+. +.. +..|..+ .++..+...+
T Consensus 157 ~~-~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~-~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 157 PE-IFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDAL-EAPDYEI--SSLAELLDLL 226 (229)
T ss_pred cH-HHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCc-cCCceEE--cCHHHHHHHH
Confidence 33 233344444 45699999975 78444455544 34444 221 122 4455555 3355555544
No 181
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=63.85 E-value=39 Score=32.98 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=66.2
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHH---HHHHh-----CCCCCCCCCcccccccccccCCcccHHHHhhhC
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKE---TGRRL-----GMGTNMYPSSALLGQNKDESIVALPVDELIEKA 562 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~---ia~~l-----Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (875)
|..++++.+..+.+++.|.+++-+|+....-|.. --.+. +++.- .++... ..+-..+ .-
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G----pv~~sP--------~~l~~al-~r 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG----PVLLSP--------DSLFSAL-HR 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC----CEEECC--------cchhhhh-hc
Confidence 7899999999999999999999999998533322 22222 33211 111110 0000000 00
Q ss_pred cEEEEeCHHHHHHHHHHHhhC-----CCEEEEEcCCccCHHHHhhCCce
Q 002832 563 DGFAGVFPEHKYEIVKRLQAR-----KHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 563 ~vfar~sP~~K~~iV~~lq~~-----g~~Vam~GDG~NDapALk~AdVG 606 (875)
++..+-.-+.|....+.+++. ...++.-|.-.+|+.|-++++|-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 234454457899999988864 34678889999999999987663
No 182
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=63.73 E-value=1.2e+02 Score=38.70 Aligned_cols=271 Identities=17% Similarity=0.128 Sum_probs=140.5
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCC
Q 002832 17 DLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPP 95 (875)
Q Consensus 17 ~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~ 95 (875)
..+.++.+|..++++.. .+.+.+++-+....++ +..|...+...+...-.+.+.+....... .
T Consensus 41 ~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~f------------l~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~ 104 (917)
T COG0474 41 PTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKF------------LRQFKDPFIILLLVAALLSAFVGDWVDAG----V 104 (917)
T ss_pred cccCCCHHHHHHHHhhcCCccccccccCcHHHHH------------HHHHHHHHHHHHHHHHHHHHHhhcccccC----c
Confidence 35566778888887733 3444444333333332 22333333333333333333333332110 1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC------cEEE----EECCeEEEEecCCcCCCcEEEEecCCc
Q 002832 96 DWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAP------KSKV----LRDGKWMEEDAAILVPGDIISVKLGDI 165 (875)
Q Consensus 96 ~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~------~~~V----~rdg~~~~I~~~~Lv~GDiv~l~~G~~ 165 (875)
++.....++++..+.....-++..++-++++++...... ...+ +.-|....+...|.+|-|...++..+
T Consensus 105 ~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~- 183 (917)
T COG0474 105 DAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD- 183 (917)
T ss_pred ceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-
Confidence 334444555555555678888888887777777554332 1222 23588999999999999999999877
Q ss_pred cccceEEEecCCeeeeccc--cCCCCeeee---c---CCCCceeecceeccCceeEEEEEecchhhhhhhhhhhcccCCC
Q 002832 166 IPADARLLEGDPLKIDQSA--LTGESLPVT---K---GPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQ 237 (875)
Q Consensus 166 vPaD~~ll~g~~l~VdeS~--LTGEs~pv~---K---~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 237 (875)
.=+|=-.+.|++.-|+-.. .++|..|.. + ..|..+.+|+-..--..+|.-+..|..+..-+...... .+-.
T Consensus 184 l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~-t~l~ 262 (917)
T COG0474 184 LEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVK-TPLQ 262 (917)
T ss_pred ceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccC-CcHH
Confidence 4556666666654333222 122333333 3 34777777774332234444555565554333221111 2222
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 002832 238 GHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (875)
Q Consensus 238 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~ 305 (875)
..+.+....+..+.+...++..+...+.........+..++.-++++..-+.|..+-+++.++...=+
T Consensus 263 ~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ma 330 (917)
T COG0474 263 RKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMA 330 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence 34555555555554433333333322221111122344556666667777777777777777665433
No 183
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=60.63 E-value=31 Score=37.45 Aligned_cols=138 Identities=15% Similarity=0.170 Sum_probs=78.0
Q ss_pred cCCCCCCChHHHHHHHHhCCCcE---EEEcCCCHHHH------HHHHHHhCCCCCCCC-------------------Ccc
Q 002832 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIA------KETGRRLGMGTNMYP-------------------SSA 540 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~tA------~~ia~~lGi~~~~~~-------------------~~~ 540 (875)
+.+++|++.++.++++++.|++. .+.-||++... ...|+++||...... +..
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 45678889999999999888874 56669887554 345677888532110 000
Q ss_pred cccc--------ccc-----------c---cCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhh--CCCEEEEEcCC-cc
Q 002832 541 LLGQ--------NKD-----------E---SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQA--RKHICGMTGDG-VN 595 (875)
Q Consensus 541 ~~~~--------~~~-----------~---~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~--~g~~Vam~GDG-~N 595 (875)
+.|- ..+ . .+....+..+...-..|.-|||.-=.++++...- .|+.|+++|-| +-
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~iv 171 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIV 171 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 0000 000 0 0111122222222234667788777777766543 49999999997 44
Q ss_pred CHH---HHhhCCceEEec-C--c-cHHHhhccCEEecC
Q 002832 596 DAP---ALKKADIGIAVA-D--A-TDAARSASDIVLTE 626 (875)
Q Consensus 596 Dap---ALk~AdVGIamg-~--g-td~ak~aADivL~~ 626 (875)
=.| .|.+++.-+.+- + . ...+-..||+|+.-
T Consensus 172 G~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 172 GKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 433 456666666553 2 1 12223468998864
No 184
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=59.84 E-value=9.1 Score=37.71 Aligned_cols=86 Identities=14% Similarity=0.053 Sum_probs=52.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++ ++.++|.-+.......-++.|+.... ..++.+++.. ...-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~~-----------------~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTVR-----------------AYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhcC-----------------CCCCCHH
Confidence 57899999998 36788988888878888888874211 1122221110 1111232
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhC
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~A 603 (875)
-=....+.+.-....+.|+||...|..+-+++
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 21333444443445699999999998876653
No 185
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=57.63 E-value=40 Score=37.39 Aligned_cols=105 Identities=18% Similarity=0.170 Sum_probs=65.2
Q ss_pred CCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh-C-------CCCCCCCCcccccccc-------------cc---c
Q 002832 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL-G-------MGTNMYPSSALLGQNK-------------DE---S 549 (875)
Q Consensus 494 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l-G-------i~~~~~~~~~~~~~~~-------------~~---~ 549 (875)
-|++++.+++|+++|+++.++|+-....+..+-+.+ | +.. .-..++.+... +. .
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~--yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~ 263 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRD--YFDVVIVDARKPGFFTEGRPFRQVDVETGS 263 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHh--hCcEEEeCCCCCcccCCCCceEEEeCCCCc
Confidence 579999999999999999999999999999988886 6 221 11122222110 00 0
Q ss_pred CCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCc-cCHHHHh-hCC
Q 002832 550 IVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGV-NDAPALK-KAD 604 (875)
Q Consensus 550 ~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~-NDapALk-~Ad 604 (875)
+....... +++-.||+.=+-.+ +-+.+...+..|+++||-. .|.-.-+ .++
T Consensus 264 ~~~~~~~~-l~~g~vY~gGn~~~---~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~G 316 (343)
T TIGR02244 264 LKWGEVDG-LEPGKVYSGGSLKQ---FHELLKWRGKEVLYFGDHIYGDLLRSKKKRG 316 (343)
T ss_pred ccCCcccc-ccCCCeEeCCCHHH---HHHHHCCCCCcEEEECCcchHHHHhhHHhcC
Confidence 00011111 33445666555433 3455566789999999986 6776555 443
No 186
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=57.46 E-value=33 Score=34.35 Aligned_cols=98 Identities=15% Similarity=0.216 Sum_probs=56.1
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhC------cEEE
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKA------DGFA 566 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~vfa 566 (875)
+.|++.+++..|+++|.+++|+|-=+ ||...-.+ +...+. ...-+.+.++.. ..+|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rgyf~-----~~~f~~--~~~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRGYFT-----EADFDK--LHNKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------CccccCcc-----HHHHHH--HHHHHHHHHHHcCCccceEEEC
Confidence 57899999999999999999999632 33211000 000000 000000001000 1233
Q ss_pred EeCHHH--------HHHHHHHHhhCC---CEEEEEcCCccCHHHHhhCCceEEe
Q 002832 567 GVFPEH--------KYEIVKRLQARK---HICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 567 r~sP~~--------K~~iV~~lq~~g---~~Vam~GDG~NDapALk~AdVGIam 609 (875)
.-.|++ ...+.+.+++.+ ....||||-..|..+-..|+++ ..
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 333332 345566666654 5678999999999999988887 54
No 187
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=56.16 E-value=22 Score=37.88 Aligned_cols=118 Identities=15% Similarity=0.146 Sum_probs=65.8
Q ss_pred CChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhh-----hCcEEEEeC
Q 002832 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE-----KADGFAGVF 569 (875)
Q Consensus 495 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~vfar~s 569 (875)
++..++++.|++.|.+..+.|+.............|+.. +-..+. +..++..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~---------------------~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP---------------------FVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH---------------------HHHHHHHHhCCCceeecCCC
Confidence 578889999999999999998866433322222222110 000000 011223333
Q ss_pred HHHHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEE-ecCcc----H--HHhhccCEEecCCChhHHHHH
Q 002832 570 PEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIA-VADAT----D--AARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 570 P~~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdVGIa-mg~gt----d--~ak~aADivL~~~~~~~i~~~ 635 (875)
|+-=..+.+.+......+.|+||.. +|..+-+++++--. +..|. + .....+|.++ +++..+...
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 4333334444444456799999996 89999998886433 33442 1 1223467777 556666544
No 188
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=56.03 E-value=18 Score=35.50 Aligned_cols=89 Identities=24% Similarity=0.315 Sum_probs=60.4
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCH----HHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEe
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~----~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (875)
|++=+++.|..-++.|=+++.+||..+ .+++.+|+...|..- ... +|+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m--~pv------------------------~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM--NPV------------------------IFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC--cce------------------------eeccC
Confidence 577788889988999999999999985 466677776666321 111 23333
Q ss_pred CH--HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEe
Q 002832 569 FP--EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAV 609 (875)
Q Consensus 569 sP--~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIam 609 (875)
.| . +..=...+|+++- -..-||.-||..|-|+|++ ||-+
T Consensus 169 k~k~~-qy~Kt~~i~~~~~-~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 KPKPG-QYTKTQWIQDKNI-RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCcc-cccccHHHHhcCc-eEEecCCchhhhHHHhcCccceeE
Confidence 23 2 2233456676664 4578999999999999875 5543
No 189
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=55.27 E-value=27 Score=41.16 Aligned_cols=40 Identities=15% Similarity=0.126 Sum_probs=32.2
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCH------------HHHHHHHHHhCCC
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQL------------AIAKETGRRLGMG 532 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~------------~tA~~ia~~lGi~ 532 (875)
+-|++++++++|+++|++++++|.=.. ..+.++.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997433 3466777777774
No 190
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=52.64 E-value=48 Score=36.05 Aligned_cols=138 Identities=17% Similarity=0.212 Sum_probs=74.3
Q ss_pred cCCCCCCChHHHHHHHHhC-CCcE---EEEcCCCHH------HHHHHHHHhCCCCCCCCC-------------------c
Q 002832 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLA------IAKETGRRLGMGTNMYPS-------------------S 539 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~a-GI~v---~miTGD~~~------tA~~ia~~lGi~~~~~~~-------------------~ 539 (875)
+.+++|++.++.++++++. |++. .+.-||++. .....|+++||....... .
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~ 89 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADP 89 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456788889999999876 7763 555688864 345667788885321100 0
Q ss_pred ccccc--------ccc-----------cc---CCcccHHHHhhhCcEEEEeCHHHHHHHHHHHh--hCCCEEEEEcC-Cc
Q 002832 540 ALLGQ--------NKD-----------ES---IVALPVDELIEKADGFAGVFPEHKYEIVKRLQ--ARKHICGMTGD-GV 594 (875)
Q Consensus 540 ~~~~~--------~~~-----------~~---~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq--~~g~~Vam~GD-G~ 594 (875)
.+.|- .++ .+ +....+-.+..+-..|.=|||.-=.++++... -.|..|+++|- |.
T Consensus 90 ~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~ 169 (296)
T PRK14188 90 AIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNL 169 (296)
T ss_pred CCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcc
Confidence 00000 000 00 11111222222223456778877666666653 25999999994 43
Q ss_pred cCHH---HHhhCCceEEec-C---ccHHHhhccCEEecC
Q 002832 595 NDAP---ALKKADIGIAVA-D---ATDAARSASDIVLTE 626 (875)
Q Consensus 595 NDap---ALk~AdVGIamg-~---gtd~ak~aADivL~~ 626 (875)
-=.| .|.+++.-+.+- + ..+.+-..||+|+.-
T Consensus 170 mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 170 VGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred hHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 3333 455666666554 2 122223468888754
No 191
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=52.06 E-value=13 Score=34.83 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=27.9
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t 521 (875)
+++.+++.++++++++.|++++++||.+...
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 6788999999999999999999999998654
No 192
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=51.86 E-value=2.4e+02 Score=35.21 Aligned_cols=191 Identities=15% Similarity=0.070 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEe-cCCeeeeccccC
Q 002832 108 LINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLE-GDPLKIDQSALT 186 (875)
Q Consensus 108 ~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~-g~~l~VdeS~LT 186 (875)
++..+...+.-+...++-+++.++...... ...+ ++-|....+...|.+|=|.++++ |+.+-+|=-.+.
T Consensus 63 ~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~------~~~V----~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~ 132 (755)
T TIGR01647 63 GLLLLNATIGFIEENKAGNAVEALKQSLAP------KARV----LRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE 132 (755)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhCCC------eEEE----EECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe
Confidence 334444455556666666666654332211 1111 23477889999999999999987 444556666666
Q ss_pred CCCeeeecCC--CCc----eeecceeccCceeEEEEEecchhhhhhhhh---hhcccCCCCcHHHHHHHHHHHHHHHHHH
Q 002832 187 GESLPVTKGP--GDS----VYSGSTCKQGEIEAVVIATGVHTFFGKAAH---LVDSTNQQGHFQKVLTAIGNFCICSIAV 257 (875)
Q Consensus 187 GEs~pv~K~~--~~~----v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 257 (875)
|+..-+.-+. |+. -..|..+..|+...-=..++.-+..|.-.. ..+.-++..+-....++....+...++.
T Consensus 133 g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~ 212 (755)
T TIGR01647 133 GDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIV 212 (755)
T ss_pred cCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHH
Confidence 6644443221 221 124555555553322112222222221100 0000011111111122222222222222
Q ss_pred HHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 002832 258 GMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308 (875)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l 308 (875)
..++..++.+..........+...+...++..-.+.|.+++++...+...-
T Consensus 213 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g 263 (755)
T TIGR01647 213 LIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVG 263 (755)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHH
Confidence 222222222222111122334555666677777888888888888776543
No 193
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=51.32 E-value=72 Score=34.07 Aligned_cols=90 Identities=10% Similarity=0.136 Sum_probs=50.4
Q ss_pred cCCCCCCChHHHHHHHHhCCCc-EEEEcCCC-HHHHHHHHHHhC-CCCCCCCCcccccccccccCCcccHHHHhhhCcEE
Q 002832 489 LFDPPRHDSAETIRRALNLGVN-VKMITGDQ-LAIAKETGRRLG-MGTNMYPSSALLGQNKDESIVALPVDELIEKADGF 565 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~-v~miTGD~-~~tA~~ia~~lG-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vf 565 (875)
+-|-|=++..+.++.|++.|+. +.+++=.. .+.-+.+++... ..- .+...-.+|...
T Consensus 125 ipDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFIY-~vS~~GvTG~~~------------------- 184 (263)
T CHL00200 125 IPDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIY-LVSTTGVTGLKT------------------- 184 (263)
T ss_pred ecCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcEE-EEcCCCCCCCCc-------------------
Confidence 3344447788888888888887 45565554 355566666553 210 001122333221
Q ss_pred EEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHH
Q 002832 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600 (875)
Q Consensus 566 ar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapAL 600 (875)
..|++-.++++.+++.-..-.++|=|+|+..-.
T Consensus 185 --~~~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~ 217 (263)
T CHL00200 185 --ELDKKLKKLIETIKKMTNKPIILGFGISTSEQI 217 (263)
T ss_pred --cccHHHHHHHHHHHHhcCCCEEEECCcCCHHHH
Confidence 114555677777777644445679999965433
No 194
>PLN02423 phosphomannomutase
Probab=51.04 E-value=21 Score=37.68 Aligned_cols=40 Identities=25% Similarity=0.232 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhhCCCEEEEEcC----CccCHHHHhh-CCceEEecC
Q 002832 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKK-ADIGIAVAD 611 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GD----G~NDapALk~-AdVGIamg~ 611 (875)
-+|..-++.|+ ...-|++.|| |-||.+||+. -=.||.+.+
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 47999999999 6678899999 8999999997 667888864
No 195
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=50.58 E-value=18 Score=42.66 Aligned_cols=149 Identities=18% Similarity=0.189 Sum_probs=86.5
Q ss_pred ECCeEEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCCCceeecceeccCc---------
Q 002832 140 RDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGE--------- 210 (875)
Q Consensus 140 rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~--------- 210 (875)
+-|....+...|.+|-|.+.++. ..=+|--.+.|++.-+.-. .|+.. ..|..++.|+....-.
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~--~g~~v----~~gs~~~~G~~~~~v~~~~~~s~~~ 124 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKT--AGDAV----FAGTYVFNGTLIVVVSATGPNTFGG 124 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeec--cCCcc----ccCcEEeccEEEEEEEEeccccHHH
Confidence 35889999999999999999966 4455666677776434332 24432 4677888888654211
Q ss_pred eeEEEEEecchhhhhhhhhhhcccCCCCcHHHHH-HHHHHHHHHHHHHHHHHHHHHhhh--cccCCchhhHHHHHHHHHH
Q 002832 211 IEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVL-TAIGNFCICSIAVGMIVEIIVMYP--IQHRKYRPGIDNLLVLLIG 287 (875)
Q Consensus 211 ~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~llv~ 287 (875)
..+.++++|.+|. ..-+....+.. ..+..+.+.+.++.++......+. .+...+..++..++..+.+
T Consensus 125 ~i~~~v~~~~~~k----------~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~ 194 (499)
T TIGR01494 125 KIAVVVYTGFETK----------TPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPI 194 (499)
T ss_pred HHHHHHHhcCCCC----------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCC
Confidence 2334556666552 11122233333 344433332222222222222111 0233456677778888899
Q ss_pred hcCCchHHHHHHHHHHHHH
Q 002832 288 GIPIAMPTVLSVTMAIGSH 306 (875)
Q Consensus 288 ~iP~~Lp~~~~i~~~~~~~ 306 (875)
++|.++|++...+.....+
T Consensus 195 aL~~~~~~~~~~~~~~~~~ 213 (499)
T TIGR01494 195 ALPLAVTIALAVGDARLAK 213 (499)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 9999999999988776553
No 196
>PTZ00174 phosphomannomutase; Provisional
Probab=49.42 E-value=21 Score=37.60 Aligned_cols=41 Identities=17% Similarity=0.325 Sum_probs=32.3
Q ss_pred EEeccCC-CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHH
Q 002832 485 GLMPLFD-PPRHDSAETIRRALNLGVNVKMITGDQLAIAKET 525 (875)
Q Consensus 485 G~i~~~D-~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~i 525 (875)
|.+.=.| ++-|.+.++|+++++.|+++++.||.+.......
T Consensus 14 GTLL~~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~ 55 (247)
T PTZ00174 14 GTLTKPRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQ 55 (247)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 3333343 4888999999999999999999999998755443
No 197
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=48.53 E-value=18 Score=38.72 Aligned_cols=99 Identities=15% Similarity=0.129 Sum_probs=63.7
Q ss_pred EEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCC-CCCCCCCcccccccccccCCcccHHHHhhh
Q 002832 483 FIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM-GTNMYPSSALLGQNKDESIVALPVDELIEK 561 (875)
Q Consensus 483 ~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (875)
+=|.+.--+.+=|++.++|++|+++|++++.+|.-...+...+++++.= .... ...++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~-----------------~~~~~---- 73 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVD-----------------VTPDD---- 73 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCC-----------------CCHHH----
Confidence 3488888899999999999999999999999999887777655554421 1000 00011
Q ss_pred CcEEEEeCHHHHHHHHHHHhhC--CCEEEEEcCCccCHHHHhhCCceEEec
Q 002832 562 ADGFAGVFPEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVA 610 (875)
Q Consensus 562 ~~vfar~sP~~K~~iV~~lq~~--g~~Vam~GDG~NDapALk~AdVGIamg 610 (875)
|+ |+.+ ...+.++++ +.+|.++|.+ .+-..|+.+++-+.-.
T Consensus 74 --i~---TS~~--at~~~l~~~~~~~kv~viG~~-~l~~~l~~~G~~~~~~ 116 (269)
T COG0647 74 --IV---TSGD--ATADYLAKQKPGKKVYVIGEE-GLKEELEGAGFELVDE 116 (269)
T ss_pred --ee---cHHH--HHHHHHHhhCCCCEEEEECCc-chHHHHHhCCcEEecc
Confidence 11 1111 112334433 3689999943 5668888888776653
No 198
>PLN02591 tryptophan synthase
Probab=48.53 E-value=84 Score=33.30 Aligned_cols=81 Identities=14% Similarity=0.157 Sum_probs=47.2
Q ss_pred CChHHHHHHHHhCCCc-EEEEcCCC-HHHHHHHHHHh-CCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 495 HDSAETIRRALNLGVN-VKMITGDQ-LAIAKETGRRL-GMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 495 ~~~~~~I~~l~~aGI~-v~miTGD~-~~tA~~ia~~l-Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++..+..+.|++.|+. +.++|-.. .+..+.+++.. |.. ......-++|... -.|+
T Consensus 118 ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFI-Y~Vs~~GvTG~~~---------------------~~~~ 175 (250)
T PLN02591 118 EETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFV-YLVSSTGVTGARA---------------------SVSG 175 (250)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcE-EEeeCCCCcCCCc---------------------CCch
Confidence 7788888888888887 44555555 35566666653 221 0000111222211 1255
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDA 597 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDa 597 (875)
+=.+.++.+++....-.++|=|+++.
T Consensus 176 ~~~~~i~~vk~~~~~Pv~vGFGI~~~ 201 (250)
T PLN02591 176 RVESLLQELKEVTDKPVAVGFGISKP 201 (250)
T ss_pred hHHHHHHHHHhcCCCceEEeCCCCCH
Confidence 55677888887656666789999944
No 199
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=47.61 E-value=4.1e+02 Score=34.36 Aligned_cols=200 Identities=12% Similarity=0.054 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----CCc-EEE----EECCeEEEEecCCcCCCcEEEEecCCccccc
Q 002832 100 FVGIVTLLLINSTISFIEENNAGNAAAALMASL-----APK-SKV----LRDGKWMEEDAAILVPGDIISVKLGDIIPAD 169 (875)
Q Consensus 100 ~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~-----~~~-~~V----~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD 169 (875)
.++++++..+.....-.+.+++-+++..+.... ..+ ..+ +.-|....+...|.+|.|.+.++..+ +=+|
T Consensus 110 i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~Vd 188 (997)
T TIGR01106 110 LSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVD 188 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEE
Confidence 344555555556666667777776666653221 111 122 13588899999999999999998653 3456
Q ss_pred eEEEecCCeeeeccccCCCCeeee----cCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhc-ccCCCCcHHHHH
Q 002832 170 ARLLEGDPLKIDQSALTGESLPVT----KGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-STNQQGHFQKVL 244 (875)
Q Consensus 170 ~~ll~g~~l~VdeS~LTGEs~pv~----K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~-~~~~~~~~~~~~ 244 (875)
=-.+.|++.-|.-..-..+..|.. -..|..+.+|+...-=...|.=+..|.-...- .+.-. ...-+..+++..
T Consensus 189 eS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~--~~~~~~~~pl~~~~~~~~ 266 (997)
T TIGR01106 189 NSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLA--SGLENGKTPIAIEIEHFI 266 (997)
T ss_pred ccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhh--hhcccCCCcHHHHHHHHH
Confidence 556666653333221110111211 12456666675322111122223333322211 11111 122234566667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHH
Q 002832 245 TAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (875)
Q Consensus 245 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~ 303 (875)
+.+..+.+++.++.+++..+..+. ....+..++..+++.+..++|..+++++..+...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~ 324 (997)
T TIGR01106 267 HIITGVAVFLGVSFFILSLILGYT-WLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 324 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHH
Confidence 776665433322222222222111 1122334455556667788899888888877654
No 200
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=47.18 E-value=56 Score=35.47 Aligned_cols=138 Identities=15% Similarity=0.220 Sum_probs=76.6
Q ss_pred cCCCCCCChHHHHHHHHhC-CCc---EEEEcCCCHHH------HHHHHHHhCCCCCCCCC-------------------c
Q 002832 489 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAI------AKETGRRLGMGTNMYPS-------------------S 539 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~t------A~~ia~~lGi~~~~~~~-------------------~ 539 (875)
+.+++|++.++-++++++. |++ +.+..||++.. ....|+++||....... .
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 88 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDP 88 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456788899999999877 776 46778998744 44567788885321100 0
Q ss_pred ccccc--------cccc-----------c---CCcccHHHHhhhC--cEEEEeCHHHHHHHHHHHhh--CCCEEEEEcCC
Q 002832 540 ALLGQ--------NKDE-----------S---IVALPVDELIEKA--DGFAGVFPEHKYEIVKRLQA--RKHICGMTGDG 593 (875)
Q Consensus 540 ~~~~~--------~~~~-----------~---~~~~~~~~~~~~~--~vfar~sP~~K~~iV~~lq~--~g~~Vam~GDG 593 (875)
.+.|- ..++ + +....+..+..+- .-|.-|||.-=.++++...- .|+.|+++|.+
T Consensus 89 ~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS 168 (295)
T PRK14174 89 DVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRS 168 (295)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCC
Confidence 00000 0000 0 1111122222221 33566888876666666542 48999999998
Q ss_pred ccC----HHHHh------hCCceEEecCccH--HHhhccCEEecC
Q 002832 594 VND----APALK------KADIGIAVADATD--AARSASDIVLTE 626 (875)
Q Consensus 594 ~ND----apALk------~AdVGIamg~gtd--~ak~aADivL~~ 626 (875)
..= +.+|. .|.|-++-....+ ..-..||+++..
T Consensus 169 ~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 169 NIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAA 213 (295)
T ss_pred CcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 541 22333 3666666654333 233579998854
No 201
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=47.16 E-value=56 Score=35.25 Aligned_cols=138 Identities=13% Similarity=0.146 Sum_probs=77.2
Q ss_pred cCCCCCCChHHHHHHHHhC-CCcE---EEEcCCCHHH------HHHHHHHhCCCCCCCCC-------------------c
Q 002832 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAI------AKETGRRLGMGTNMYPS-------------------S 539 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~a-GI~v---~miTGD~~~t------A~~ia~~lGi~~~~~~~-------------------~ 539 (875)
+...+|++.++.++.+++. |++. .++.||++.. -...|+++||....... .
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~ 88 (286)
T PRK14184 9 TAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARP 88 (286)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456788889999999877 7764 5667998754 34567778885421100 0
Q ss_pred ccccc--------ccc-----------cc---CCcccHHHHhhhCcEEEEeCHHHHHHHHHHHh--hCCCEEEEEcCCcc
Q 002832 540 ALLGQ--------NKD-----------ES---IVALPVDELIEKADGFAGVFPEHKYEIVKRLQ--ARKHICGMTGDGVN 595 (875)
Q Consensus 540 ~~~~~--------~~~-----------~~---~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq--~~g~~Vam~GDG~N 595 (875)
.+.|- ..+ .+ +....+..+...-.-|.-|||.-=.++++..+ -.|+.|.++|-+..
T Consensus 89 ~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~i 168 (286)
T PRK14184 89 DIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNI 168 (286)
T ss_pred cCceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 00000 000 00 11111222222223466788887777777664 24899999998853
Q ss_pred ----CHHHHhh------CCceEEecCccHH--HhhccCEEecC
Q 002832 596 ----DAPALKK------ADIGIAVADATDA--ARSASDIVLTE 626 (875)
Q Consensus 596 ----DapALk~------AdVGIamg~gtd~--ak~aADivL~~ 626 (875)
=+-+|.+ |.|-++-....+. .-..||+++..
T Consensus 169 VG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 169 VGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVA 211 (286)
T ss_pred chHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 1334443 6666666543332 33478888753
No 202
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=47.11 E-value=78 Score=33.67 Aligned_cols=41 Identities=17% Similarity=0.234 Sum_probs=28.3
Q ss_pred cCCCCCCChHHHHHHHHhCCCcEE-EEcCCC-HHHHHHHHHHh
Q 002832 489 LFDPPRHDSAETIRRALNLGVNVK-MITGDQ-LAIAKETGRRL 529 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~v~-miTGD~-~~tA~~ia~~l 529 (875)
+-|-+-++..+.++.|++.|++.+ +++=.. .+....+++..
T Consensus 121 ipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 121 VADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred ECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 335555788999999999999854 666555 34556666654
No 203
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=46.26 E-value=1.1e+02 Score=32.21 Aligned_cols=134 Identities=16% Similarity=0.149 Sum_probs=67.1
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE--e
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG--V 568 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar--~ 568 (875)
-.+|+++.+.++.|++.+|.+.+.|+-=-....++=++-|...+.. .+..+.++-+-++ . ..-|-. .
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv---~VvSN~M~Fd~~g-~-------l~gF~~~lI 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNV---KVVSNFMDFDEDG-V-------LVGFKGPLI 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTE---EEEEE-EEE-TTS-B-------EEEE-SS--
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCe---EEEeeeEEECCcc-e-------EeecCCCce
Confidence 3689999999999999999999999766666666666666543221 1111111100000 0 000000 0
Q ss_pred CHHHHHH-------HHHHHhhCCCEEEEEcCCccCHHHHhhC---CceEEec--Cc-----cHHHhhccCEEecCCChhH
Q 002832 569 FPEHKYE-------IVKRLQARKHICGMTGDGVNDAPALKKA---DIGIAVA--DA-----TDAARSASDIVLTEPGLSV 631 (875)
Q Consensus 569 sP~~K~~-------iV~~lq~~g~~Vam~GDG~NDapALk~A---dVGIamg--~g-----td~ak~aADivL~~~~~~~ 631 (875)
-+-.|-. .-+.++. ...|...||..-|+.|-.-. +.-+.+| +. -+.=+++=||||.+|.=-.
T Consensus 158 H~~NKn~~~l~~~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 158 HTFNKNESALEDSPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp -TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred EEeeCCcccccCchHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 0111211 1123333 34688999999999987655 4444455 32 2234567899999997555
Q ss_pred HHHHH
Q 002832 632 IISAV 636 (875)
Q Consensus 632 i~~~i 636 (875)
++.+|
T Consensus 237 v~~~i 241 (246)
T PF05822_consen 237 VPNAI 241 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 204
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=46.19 E-value=28 Score=32.10 Aligned_cols=39 Identities=28% Similarity=0.406 Sum_probs=30.1
Q ss_pred CCCChHHHHHHHHhCCCc-EEEEcCCCHHHHHHHHHHhCC
Q 002832 493 PRHDSAETIRRALNLGVN-VKMITGDQLAIAKETGRRLGM 531 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~-v~miTGD~~~tA~~ia~~lGi 531 (875)
+.+.+.+.+++|.+.|++ +|+.+|...+.+.+.|++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 445789999999999998 899999999999999999887
No 205
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=45.96 E-value=76 Score=34.93 Aligned_cols=49 Identities=20% Similarity=0.205 Sum_probs=39.8
Q ss_pred EEEeccCCCCCCChHHHHHHHHhC----CCcEEEEcCCC---H-HHHHHHHHHhCCC
Q 002832 484 IGLMPLFDPPRHDSAETIRRALNL----GVNVKMITGDQ---L-AIAKETGRRLGMG 532 (875)
Q Consensus 484 lG~i~~~D~lr~~~~~~I~~l~~a----GI~v~miTGD~---~-~tA~~ia~~lGi~ 532 (875)
=|++.-.+++-|++.++++.|++. |+++..+|-.. . ..+..+.+++|+.
T Consensus 8 DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 8 DGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred cCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 377788889999999999999998 99999999654 3 3466666778874
No 206
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=45.07 E-value=1.7e+02 Score=27.30 Aligned_cols=70 Identities=13% Similarity=0.160 Sum_probs=39.1
Q ss_pred HHHHHHHhhCCCEEEEEcCCcc--CHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002832 574 YEIVKRLQARKHICGMTGDGVN--DAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 650 (875)
Q Consensus 574 ~~iV~~lq~~g~~Vam~GDG~N--DapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i 650 (875)
.++++.+. +=+.|...|-|.| |..++++-+|-++=..|.- +...|+.+ ..+--..-+.++...+|++.++
T Consensus 52 ~~~l~~~~-~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~~g~~-~~aVAE~a-----~~T~e~~~~~~~~~~~ni~~~l 123 (133)
T PF00389_consen 52 AEVLEAAP-NLKLISTAGAGVDNIDLEAAKERGIPVTNVPGYN-AEAVAEHA-----GYTDEARERMAEIAAENIERFL 123 (133)
T ss_dssp HHHHHHHT-T-SEEEESSSSCTTB-HHHHHHTTSEEEE-TTTT-HHHHHHHH-----TGBHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccc-eeEEEEEcccccCcccHHHHhhCeEEEEEeCCcC-Ccchhccc-----hhHHHHHHHHHHHHHHHHHHHH
Confidence 34455553 3457899999998 8889999988888653211 11223333 3333333344556666666553
No 207
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.34 E-value=67 Score=34.67 Aligned_cols=138 Identities=12% Similarity=0.199 Sum_probs=75.3
Q ss_pred cCCCCCCChHHHHHHHHhC-CCcE---EEEcCCCHHHH------HHHHHHhCCCCCCCCC-------------------c
Q 002832 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAIA------KETGRRLGMGTNMYPS-------------------S 539 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~a-GI~v---~miTGD~~~tA------~~ia~~lGi~~~~~~~-------------------~ 539 (875)
+.+.+|.+.++.++++++. |++. .+..||++... ...|+++||....... .
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~ 89 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDP 89 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456788889999999876 7764 46778887543 4567788885321100 0
Q ss_pred ccccc--------ccc-----------cc---CCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhh--CCCEEEEEcC-Cc
Q 002832 540 ALLGQ--------NKD-----------ES---IVALPVDELIEKADGFAGVFPEHKYEIVKRLQA--RKHICGMTGD-GV 594 (875)
Q Consensus 540 ~~~~~--------~~~-----------~~---~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~--~g~~Vam~GD-G~ 594 (875)
.+.|- ..+ .+ +....+..+...-..|.=|||.-=.++++...- .|+.|+++|- |+
T Consensus 90 ~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~i 169 (284)
T PRK14179 90 TWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNI 169 (284)
T ss_pred CCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 00000 000 00 111112222222234667888876666665542 4899999999 55
Q ss_pred cCHH---HHhhCCceEEe--cCccH--HHhhccCEEecC
Q 002832 595 NDAP---ALKKADIGIAV--ADATD--AARSASDIVLTE 626 (875)
Q Consensus 595 NDap---ALk~AdVGIam--g~gtd--~ak~aADivL~~ 626 (875)
-=.| .|.+++.-+.+ ....+ ..-..||+++.-
T Consensus 170 vG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 170 VGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 5544 45555555544 22221 223479998853
No 208
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=43.45 E-value=2.3e+02 Score=33.64 Aligned_cols=70 Identities=16% Similarity=0.181 Sum_probs=51.6
Q ss_pred ChHHHHHHHHhCCCcEEEEcCCCH-HHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHH
Q 002832 496 DSAETIRRALNLGVNVKMITGDQL-AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKY 574 (875)
Q Consensus 496 ~~~~~I~~l~~aGI~v~miTGD~~-~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~ 574 (875)
|+-.+++.+++.+=++.+++=.+. ..+..++.-+++. ...+.-.++++=.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~-----------------------------i~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR-----------------------------IEQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 567777777877778888876663 4566666666653 2357778899999
Q ss_pred HHHHHHhhCCCEEEEEcCCcc
Q 002832 575 EIVKRLQARKHICGMTGDGVN 595 (875)
Q Consensus 575 ~iV~~lq~~g~~Vam~GDG~N 595 (875)
..|+.++++|..| ++||++-
T Consensus 146 ~~v~~lk~~G~~~-vvG~~~~ 165 (538)
T PRK15424 146 GQINELKANGIEA-VVGAGLI 165 (538)
T ss_pred HHHHHHHHCCCCE-EEcCchH
Confidence 9999999999654 6798854
No 209
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=42.77 E-value=20 Score=23.96 Aligned_cols=15 Identities=47% Similarity=0.669 Sum_probs=13.2
Q ss_pred CCCCCHHHHHHHHHh
Q 002832 34 KEGLSTEAAEERLTI 48 (875)
Q Consensus 34 ~~GL~~~e~~~r~~~ 48 (875)
.+|||.+|+++|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 579999999999975
No 210
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=41.92 E-value=86 Score=31.13 Aligned_cols=67 Identities=22% Similarity=0.138 Sum_probs=46.4
Q ss_pred EEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHh-hccCEEecCCChhHHHHHHHHHHHH
Q 002832 564 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR-SASDIVLTEPGLSVIISAVLTSRAI 642 (875)
Q Consensus 564 vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak-~aADivL~~~~~~~i~~~i~~gR~~ 642 (875)
.+.=-+|++=...++.+++.| .-+.+|++.- .+.|+ .--..++...+-.+|..|+.+++++
T Consensus 105 ~~~~~~~~e~~~~i~~~~~~G-~~viVGg~~~-----------------~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i 166 (176)
T PF06506_consen 105 IYPYDSEEEIEAAIKQAKAEG-VDVIVGGGVV-----------------CRLARKLGLPGVLIESGEESIRRALEEALRI 166 (176)
T ss_dssp EEEESSHHHHHHHHHHHHHTT---EEEESHHH-----------------HHHHHHTTSEEEESS--HHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcC-CcEEECCHHH-----------------HHHHHHcCCcEEEEEecHHHHHHHHHHHHHH
Confidence 455567888888999999998 4457777631 12222 2334678888899999999999999
Q ss_pred HHHHHH
Q 002832 643 FQRMKN 648 (875)
Q Consensus 643 ~~~i~~ 648 (875)
.+..++
T Consensus 167 ~~~~~~ 172 (176)
T PF06506_consen 167 ARARRR 172 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887764
No 211
>PRK11507 ribosome-associated protein; Provisional
Probab=40.87 E-value=32 Score=28.58 Aligned_cols=27 Identities=22% Similarity=0.250 Sum_probs=23.5
Q ss_pred EEEEECCeEEEEecCCcCCCcEEEEec
Q 002832 136 SKVLRDGKWMEEDAAILVPGDIISVKL 162 (875)
Q Consensus 136 ~~V~rdg~~~~I~~~~Lv~GDiv~l~~ 162 (875)
-.|..||+...-.-+.|.|||+|.+..
T Consensus 37 g~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 37 GQVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred CceEECCEEecccCCCCCCCCEEEECC
Confidence 357889999999999999999999854
No 212
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=40.66 E-value=7.7e+02 Score=31.33 Aligned_cols=195 Identities=14% Similarity=0.096 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-----------c-EEEE----ECCeEEEEecCCcCCCcEEEEecCCcc
Q 002832 103 IVTLLLINSTISFIEENNAGNAAAALMASLAP-----------K-SKVL----RDGKWMEEDAAILVPGDIISVKLGDII 166 (875)
Q Consensus 103 ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~-----------~-~~V~----rdg~~~~I~~~~Lv~GDiv~l~~G~~v 166 (875)
+++..+++.+.++-.+ ++-++++++...... + ..|- .-|....+...|.+|-|.+.++. +-+
T Consensus 98 v~~~~~i~~~~e~~a~-ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g-~~l 175 (867)
T TIGR01524 98 VLASGLLGFIQESRAE-RAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISA-RDL 175 (867)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEec-Cce
Confidence 3344445555555554 666666666443221 1 2221 24788999999999999998874 334
Q ss_pred ccceEEEecCCeeeeccccC--CCCeee-----ecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhcc-cCCCC
Q 002832 167 PADARLLEGDPLKIDQSALT--GESLPV-----TKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQQG 238 (875)
Q Consensus 167 PaD~~ll~g~~l~VdeS~LT--GEs~pv-----~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~-~~~~~ 238 (875)
=+|=-.+.|++.-|+-..-+ .+..+. .-..|..+.+|+....=...+.=+..|.=.. .+.. .+. ..-+.
T Consensus 176 ~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~--~v~~-~~~~t~lq~ 252 (867)
T TIGR01524 176 FINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAI--AATE-RRGQTAFDK 252 (867)
T ss_pred EEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHH--HhhC-CCCCCcHHH
Confidence 55777777776444332211 011111 1246778888764322112222222232111 1112 222 22223
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHH
Q 002832 239 HFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (875)
Q Consensus 239 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~ 303 (875)
.+++..+.+..+.+....+.+++..+. .......+..++..+++.+..+.|.++++++..+...
T Consensus 253 ~~~~i~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~ 316 (867)
T TIGR01524 253 GVKSVSKLLIRFMLVMVPVVLMINGLM-KGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAIN 316 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHheehHHHh-cCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHH
Confidence 345555555444332222222221111 1111223344566677788888899999988887644
No 213
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=40.33 E-value=35 Score=40.80 Aligned_cols=65 Identities=29% Similarity=0.339 Sum_probs=43.4
Q ss_pred EecCCcCCCcEEEE-ecCCccc-cceEEEecCCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecch
Q 002832 147 EDAAILVPGDIISV-KLGDIIP-ADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVH 221 (875)
Q Consensus 147 I~~~~Lv~GDiv~l-~~G~~vP-aD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~ 221 (875)
|.-.|+.+||-|.| ++||+|| .++++.+-. +|+..|.. .|...-.+||.+...+..+..-.++..
T Consensus 363 I~rkdIrIGDtV~V~kAGdVIP~V~~Vv~e~R---------~~~~~~~~-~P~~CP~C~s~l~r~~~e~~~rC~n~~ 429 (667)
T COG0272 363 IKRKDIRIGDTVVVRKAGDVIPQVVGVVLEKR---------PGNEKPIP-FPTHCPVCGSELVREEGEVVIRCTNGL 429 (667)
T ss_pred HHhcCCCCCCEEEEEecCCCCcceeeeecccC---------CCCCCCCC-CCCCCCCCCCeeEeccCceeEecCCCC
Confidence 45689999999999 5899999 666666554 24444433 444444678888876655555556633
No 214
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=40.19 E-value=6.9e+02 Score=31.90 Aligned_cols=19 Identities=16% Similarity=0.440 Sum_probs=9.5
Q ss_pred cEEEEecCCccccceEEEe
Q 002832 156 DIISVKLGDIIPADARLLE 174 (875)
Q Consensus 156 Div~l~~G~~vPaD~~ll~ 174 (875)
....+...|.+|=|.++++
T Consensus 174 ~~~~I~~~eLvpGDiV~l~ 192 (902)
T PRK10517 174 GWLEIPIDQLVPGDIIKLA 192 (902)
T ss_pred eEEEEEHHhCCCCCEEEEC
Confidence 3444555555555555544
No 215
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=40.07 E-value=9.7e+02 Score=31.20 Aligned_cols=74 Identities=12% Similarity=0.229 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEe---cCCeee
Q 002832 104 VTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLE---GDPLKI 180 (875)
Q Consensus 104 i~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~---g~~l~V 180 (875)
++++++..+.....-+..+++.++|++ +.. ......+ ++-|....+...|.+|=|.++++ |+.+-+
T Consensus 197 ~~i~~i~~~~~~~~~~~~~k~~~~L~~-~~~------~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPa 265 (1054)
T TIGR01657 197 LCIVFMSSTSISLSVYQIRKQMQRLRD-MVH------KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMPC 265 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc------CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEecc
Confidence 444455555666677777777776653 221 1122222 23588999999999999999997 555667
Q ss_pred eccccCCC
Q 002832 181 DQSALTGE 188 (875)
Q Consensus 181 deS~LTGE 188 (875)
|=-.+.|+
T Consensus 266 D~~ll~g~ 273 (1054)
T TIGR01657 266 DSVLLSGS 273 (1054)
T ss_pred eEEEEeCc
Confidence 77777774
No 216
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=40.05 E-value=50 Score=32.68 Aligned_cols=41 Identities=20% Similarity=0.221 Sum_probs=31.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEc-CCCHHHHHHHHHHhCCC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMIT-GDQLAIAKETGRRLGMG 532 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miT-GD~~~tA~~ia~~lGi~ 532 (875)
.+-|++++++++|++.|+++.+.| -|.+..|+++=+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 467999999999999999999999 58899999999999986
No 217
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.83 E-value=42 Score=36.15 Aligned_cols=138 Identities=17% Similarity=0.220 Sum_probs=75.4
Q ss_pred cCCCCCCChHHHHHHHHhCCCc---EEEEcCCCHHHH------HHHHHHhCCCCCCCCC-------------------cc
Q 002832 489 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIA------KETGRRLGMGTNMYPS-------------------SA 540 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~~-------------------~~ 540 (875)
+.+.+|++.++-++.+++.|++ +.+..||++... ...|+++||....... ..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKT 89 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 4456788999999999988887 466779997544 4567788885421100 00
Q ss_pred cccc--------ccc-----------c---cCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHh--hCCCEEEEEcCCcc-
Q 002832 541 LLGQ--------NKD-----------E---SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQ--ARKHICGMTGDGVN- 595 (875)
Q Consensus 541 ~~~~--------~~~-----------~---~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq--~~g~~Vam~GDG~N- 595 (875)
+.|- .++ . .++...+..+...-.-|.-|||.-=.++++... -.|+.|.++|-+..
T Consensus 90 V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iV 169 (284)
T PRK14170 90 IHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIV 169 (284)
T ss_pred CCeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 0000 000 0 011111222222223356677877666666554 24899999999853
Q ss_pred ---CHHHHhh--CCceEEecCccHH--HhhccCEEecC
Q 002832 596 ---DAPALKK--ADIGIAVADATDA--ARSASDIVLTE 626 (875)
Q Consensus 596 ---DapALk~--AdVGIamg~gtd~--ak~aADivL~~ 626 (875)
=+.+|.+ |.|-++-....+. .-..|||++..
T Consensus 170 GkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 207 (284)
T PRK14170 170 GKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVA 207 (284)
T ss_pred hHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 1334443 4454444432222 22368888753
No 218
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=39.73 E-value=4.3e+02 Score=26.95 Aligned_cols=8 Identities=0% Similarity=-0.093 Sum_probs=4.2
Q ss_pred HHHHHHHh
Q 002832 845 IKFFIRYA 852 (875)
Q Consensus 845 ~k~~~r~~ 852 (875)
+.|++|+|
T Consensus 194 ~~~lkkk~ 201 (206)
T PF06570_consen 194 RFYLKKKY 201 (206)
T ss_pred HHHHHHHh
Confidence 34555554
No 219
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.68 E-value=43 Score=36.17 Aligned_cols=45 Identities=16% Similarity=0.268 Sum_probs=33.5
Q ss_pred cCCCCCCChHHHHHHHHhCCCcE---EEEcCCCHHHH------HHHHHHhCCCC
Q 002832 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIA------KETGRRLGMGT 533 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~tA------~~ia~~lGi~~ 533 (875)
+.+.+|++.++.++.+++.|++. .++-||++... ...|+++||..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 45667889999999999888874 55679987544 45567788853
No 220
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=39.06 E-value=49 Score=32.24 Aligned_cols=41 Identities=17% Similarity=0.100 Sum_probs=37.0
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (875)
=.+||++.+.+++|++. +++.+.|.-....|..+.+.++..
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 35799999999999955 999999999999999999999875
No 221
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=38.86 E-value=54 Score=35.87 Aligned_cols=147 Identities=17% Similarity=0.138 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEEecCCCC--------cCCCCCCeeEEEEeccCCCCCCChHH--HHHHHHhCCCc--E-
Q 002832 445 RRVHAIIDKFAERGLRSLAVAYQEVPDGR--------KESSGGPWQFIGLMPLFDPPRHDSAE--TIRRALNLGVN--V- 511 (875)
Q Consensus 445 ~~~~~~~~~~~~~G~rvl~~A~~~~~~~~--------~~~~e~~l~~lG~i~~~D~lr~~~~~--~I~~l~~aGI~--v- 511 (875)
+...+.++-+.+.|++=+.++.|.-+-.. .+..+..|. +|+.-=-....--++. .|-.|-..||- +
T Consensus 151 eSAl~~v~~le~~~F~diviS~KsSdv~~~i~ayr~la~~~dyPLH-lGVTEAG~~~~G~IKSaigig~LL~~GIGDTIR 229 (346)
T TIGR00612 151 QSALEEAAILEKLGFRNVVLSMKASDVAETVAAYRLLAERSDYPLH-LGVTEAGMGVKGIVKSSAGIGILLARGIGDTIR 229 (346)
T ss_pred HHHHHHHHHHHHCCCCcEEEEEEcCCHHHHHHHHHHHHhhCCCCce-eccccCCCCCCchhHHHHHHHHHHhhCCCCeEE
Confidence 34445566778888888888887633110 011112222 4444333333333444 45778888883 3
Q ss_pred EEEcCCCH---HHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH---HHHHHHHHHHhh--C
Q 002832 512 KMITGDQL---AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP---EHKYEIVKRLQA--R 583 (875)
Q Consensus 512 ~miTGD~~---~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP---~~K~~iV~~lq~--~ 583 (875)
+=+|+|.. .+|.+|-+.+|+-.... ..+. |.-|+|+.- +.=.++-+.++. .
T Consensus 230 VSLT~dP~~EV~va~~IL~slglr~~g~--~iiS-------------------CPtCGR~~~dl~~~~~~ve~~l~~~~~ 288 (346)
T TIGR00612 230 VSLTDDPTHEVPVAFEILQSLGLRARGV--EIVA-------------------CPSCGRTGFDVEKVVRRVQEALFHLKT 288 (346)
T ss_pred EECCCCcHHHHHHHHHHHHHcCCCcCCC--eEEE-------------------CCCCCCcCCCHHHHHHHHHHHHhcCCC
Confidence 34789874 57888888899854311 0110 111334331 111122233443 3
Q ss_pred CCEEEEEcCCccCHHHHhhCCceEEec-Ccc
Q 002832 584 KHICGMTGDGVNDAPALKKADIGIAVA-DAT 613 (875)
Q Consensus 584 g~~Vam~GDG~NDapALk~AdVGIamg-~gt 613 (875)
.-+||+.|-=+|-..--|.||+|||-| .|.
T Consensus 289 ~l~VAVMGCvVNGPGEak~ADiGIaggg~g~ 319 (346)
T TIGR00612 289 PLKVAVMGCVVNGPGEAKHADIGISGGGTGS 319 (346)
T ss_pred CCEEEEECceecCCchhhccCeeeecCCCCc
Confidence 568999999999999999999999987 654
No 222
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=38.69 E-value=4.6e+02 Score=33.35 Aligned_cols=199 Identities=14% Similarity=0.078 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-----CcEEEE-----ECCeEEEEecCCcCCCcEEEEecCCccccceEE
Q 002832 103 IVTLLLINSTISFIEENNAGNAAAALMASLA-----PKSKVL-----RDGKWMEEDAAILVPGDIISVKLGDIIPADARL 172 (875)
Q Consensus 103 ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~-----~~~~V~-----rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~l 172 (875)
+++.++++.+ .-+...++-+.+.++..... .+...+ .-|....+...|.+|-|.+.++..+ .=+|=-.
T Consensus 90 i~~~~~i~~~-qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~-l~VDES~ 167 (884)
T TIGR01522 90 ILIVVTVGFV-QEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD-LSIDESN 167 (884)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc-eEEEccc
Confidence 3333444444 44455566666666643322 222222 2478899999999999999997532 3356556
Q ss_pred EecCCeeeecccc--CCCC---eee---ecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhc-ccCCCCcHHHH
Q 002832 173 LEGDPLKIDQSAL--TGES---LPV---TKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-STNQQGHFQKV 243 (875)
Q Consensus 173 l~g~~l~VdeS~L--TGEs---~pv---~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~-~~~~~~~~~~~ 243 (875)
+.|++.-|+-..- .++. ..- .-..|..+-+|+-..-=...|.=+.-|.=... +.+... ++.-+..+++.
T Consensus 168 LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~--v~~~~~~kt~lq~~l~~l 245 (884)
T TIGR01522 168 LTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKM--MQAIEKPKTPLQKSMDLL 245 (884)
T ss_pred ccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHH--hccCCCCCCcHHHHHHHH
Confidence 6666533332211 1110 001 12356677676532211112222222321111 111111 12222345565
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 002832 244 LTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306 (875)
Q Consensus 244 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~ 306 (875)
.+.+....+.++++.+++.++.. ......+..++..+++.+..+.|.++++++..+....++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak 307 (884)
T TIGR01522 246 GKQLSLVSFGVIGVICLVGWFQG-KDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSK 307 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhh
Confidence 66555443322222222222221 111122344555667777888999999998888766543
No 223
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=38.57 E-value=9.5e+02 Score=30.67 Aligned_cols=197 Identities=13% Similarity=0.069 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-----------c-EEE----EECCeEEEEecCCcCCCcEEEEecCCc
Q 002832 102 GIVTLLLINSTISFIEENNAGNAAAALMASLAP-----------K-SKV----LRDGKWMEEDAAILVPGDIISVKLGDI 165 (875)
Q Consensus 102 ~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~-----------~-~~V----~rdg~~~~I~~~~Lv~GDiv~l~~G~~ 165 (875)
+++++..+...+.-+...++.+++.++...... + ..| +.-|....+...|.+|-|.+.++..+
T Consensus 119 ~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~- 197 (903)
T PRK15122 119 TMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD- 197 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc-
Confidence 344444444455555555666666666433211 1 222 13588999999999999999987433
Q ss_pred cccceEEEecCCeeeecccc------------CCCCeee-----ecCCCCceeecceeccCceeEEEEEecchhhhhhhh
Q 002832 166 IPADARLLEGDPLKIDQSAL------------TGESLPV-----TKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAA 228 (875)
Q Consensus 166 vPaD~~ll~g~~l~VdeS~L------------TGEs~pv-----~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~ 228 (875)
+=+|=-.+.|++.-|+-... .++..+. .-..|..+.+|+...-=...+.=+..|.=... +.
T Consensus 198 l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~--v~ 275 (903)
T PRK15122 198 LFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKS--IV 275 (903)
T ss_pred eEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHH--hc
Confidence 44566666666644444321 1222111 13457777777643221112222222221111 11
Q ss_pred h-hhccc--CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 002832 229 H-LVDST--NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (875)
Q Consensus 229 ~-~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~ 305 (875)
. ..+.. .+-.++.+.+..++.++..++++ +..+. .......+..++..+++.+..+.|..+++++..+....+
T Consensus 276 ~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~---~~~~~-~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~ma 351 (903)
T PRK15122 276 GTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLL---INGFT-KGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMA 351 (903)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhh---hhhhc-cCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 1 01111 11123445444444333222111 11111 111112233455666777778888888888887654433
No 224
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.79 E-value=51 Score=35.77 Aligned_cols=137 Identities=16% Similarity=0.173 Sum_probs=76.1
Q ss_pred cCCCCCCChHHHHHHHHhCCCcE---EEEcCCCHHH------HHHHHHHhCCCCCCCCC-------------------cc
Q 002832 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------AKETGRRLGMGTNMYPS-------------------SA 540 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~t------A~~ia~~lGi~~~~~~~-------------------~~ 540 (875)
+.+.+|++.++-++++++.|++. .+.-||++.. ....|+++||..+.... ..
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADED 89 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 44567889999999999889863 5667998754 44567788885421100 00
Q ss_pred cccc--------ccc-----------c---cCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhh--CCCEEEEEcCCcc-
Q 002832 541 LLGQ--------NKD-----------E---SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQA--RKHICGMTGDGVN- 595 (875)
Q Consensus 541 ~~~~--------~~~-----------~---~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~--~g~~Vam~GDG~N- 595 (875)
+.|- ..+ . .+....+..+...-.-|.=|||.-=.++++..+- .|+.|+++|-+..
T Consensus 90 V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iV 169 (297)
T PRK14167 90 VHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIV 169 (297)
T ss_pred CCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 0000 000 0 0111112222222234556888877777776653 5899999999854
Q ss_pred ---CHHHHhh------CCceEEecCccHH--HhhccCEEec
Q 002832 596 ---DAPALKK------ADIGIAVADATDA--ARSASDIVLT 625 (875)
Q Consensus 596 ---DapALk~------AdVGIamg~gtd~--ak~aADivL~ 625 (875)
=+-+|.+ |.|-++-....+. .-..||+++.
T Consensus 170 GkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIs 210 (297)
T PRK14167 170 GKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVA 210 (297)
T ss_pred HHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 1334443 4455554432222 2347888875
No 225
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=36.28 E-value=4.2e+02 Score=28.17 Aligned_cols=84 Identities=15% Similarity=0.190 Sum_probs=43.9
Q ss_pred CCCChHHHHHHHHhCCCcEEE-EcCCC-HHHHHHHHHHhC-CCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeC
Q 002832 493 PRHDSAETIRRALNLGVNVKM-ITGDQ-LAIAKETGRRLG-MGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF 569 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~m-iTGD~-~~tA~~ia~~lG-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~s 569 (875)
+=++..+.++.|++.|+..+. +|-.. .+..+.+++... .. ......-.+|.. ...
T Consensus 127 p~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~s~gfI-Y~vs~~GvTG~~---------------------~~~ 184 (258)
T PRK13111 127 PPEEAEELRAAAKKHGLDLIFLVAPTTTDERLKKIASHASGFV-YYVSRAGVTGAR---------------------SAD 184 (258)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCcE-EEEeCCCCCCcc---------------------cCC
Confidence 336777777788888877443 66655 355555655431 10 000001112221 112
Q ss_pred HHHHHHHHHHHhhCCCEEEEEcCCccCHH
Q 002832 570 PEHKYEIVKRLQARKHICGMTGDGVNDAP 598 (875)
Q Consensus 570 P~~K~~iV~~lq~~g~~Vam~GDG~NDap 598 (875)
|++=.+.++.+++....-.++|=|+++..
T Consensus 185 ~~~~~~~i~~vk~~~~~pv~vGfGI~~~e 213 (258)
T PRK13111 185 AADLAELVARLKAHTDLPVAVGFGISTPE 213 (258)
T ss_pred CccHHHHHHHHHhcCCCcEEEEcccCCHH
Confidence 34445567777776445556799996543
No 226
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.16 E-value=54 Score=35.31 Aligned_cols=138 Identities=13% Similarity=0.153 Sum_probs=75.3
Q ss_pred cCCCCCCChHHHHHHHHhCCCcE---EEEcCCCHHHH------HHHHHHhCCCCCCCCC-------------------cc
Q 002832 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIA------KETGRRLGMGTNMYPS-------------------SA 540 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~tA------~~ia~~lGi~~~~~~~-------------------~~ 540 (875)
+.+++|++.++.++.+++.|++. .++-||++... ...|+++||....... ..
T Consensus 9 va~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 88 (282)
T PRK14169 9 VSKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPD 88 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 34567889999999999888864 56779887544 4567788885321100 00
Q ss_pred cccc--------ccc-----------c---cCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhh--CCCEEEEEcCCcc-
Q 002832 541 LLGQ--------NKD-----------E---SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQA--RKHICGMTGDGVN- 595 (875)
Q Consensus 541 ~~~~--------~~~-----------~---~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~--~g~~Vam~GDG~N- 595 (875)
+.|- ..+ . .+....+..+..+-.-|.=|||.-=.++++...- .|+.|.++|.+..
T Consensus 89 V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iV 168 (282)
T PRK14169 89 VDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIV 168 (282)
T ss_pred CCEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 0000 000 0 0111112222222234567788877777776642 4899999998843
Q ss_pred ---CHHHHhhCC--ceEEecCccHH--HhhccCEEecC
Q 002832 596 ---DAPALKKAD--IGIAVADATDA--ARSASDIVLTE 626 (875)
Q Consensus 596 ---DapALk~Ad--VGIamg~gtd~--ak~aADivL~~ 626 (875)
=+.+|...+ |-++-....+. .-..||+++..
T Consensus 169 GkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 206 (282)
T PRK14169 169 GRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVA 206 (282)
T ss_pred hHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEc
Confidence 133454444 44443332222 22467888753
No 227
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=35.67 E-value=72 Score=35.23 Aligned_cols=58 Identities=29% Similarity=0.416 Sum_probs=40.1
Q ss_pred HHHHHHHhhCCCEEEEEcCCc--------------------cCHHHHhhC--CceEEecC----ccHHHhh--ccCEEec
Q 002832 574 YEIVKRLQARKHICGMTGDGV--------------------NDAPALKKA--DIGIAVAD----ATDAARS--ASDIVLT 625 (875)
Q Consensus 574 ~~iV~~lq~~g~~Vam~GDG~--------------------NDapALk~A--dVGIamg~----gtd~ak~--aADivL~ 625 (875)
..+++.|+++|..|+.+.=|. .|-|.|=+- ++.+.++. +...+.+ .+|++++
T Consensus 69 ~~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviil 148 (325)
T PRK00652 69 IALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIIL 148 (325)
T ss_pred HHHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEE
Confidence 456788888999999884332 377766444 67777772 3344433 5899999
Q ss_pred CCChhH
Q 002832 626 EPGLSV 631 (875)
Q Consensus 626 ~~~~~~ 631 (875)
||.|..
T Consensus 149 DDGfQh 154 (325)
T PRK00652 149 DDGLQH 154 (325)
T ss_pred cCCccC
Confidence 999876
No 228
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=35.48 E-value=3.8e+02 Score=31.84 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=69.2
Q ss_pred ChHHHHHHHHhCCCcEEEEcCCCH-HHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHH
Q 002832 496 DSAETIRRALNLGVNVKMITGDQL-AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKY 574 (875)
Q Consensus 496 ~~~~~I~~l~~aGI~v~miTGD~~-~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~ 574 (875)
|+-.+++.+++.+=++.+++=.+. ..+..++.-+++. ..++.-.++++=.
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~-----------------------------i~~~~~~~~~e~~ 135 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLD-----------------------------IVQRSYVTEEDAR 135 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 567777777877777777776653 5566677666653 2357788899999
Q ss_pred HHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhc-cCEEecCCChhHHHHHHHHHHHHHHHH
Q 002832 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA-SDIVLTEPGLSVIISAVLTSRAIFQRM 646 (875)
Q Consensus 575 ~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~a-ADivL~~~~~~~i~~~i~~gR~~~~~i 646 (875)
..|+.++++|..+ ++||++- ++.|++. -.-|+..+. .+|..++......++-.
T Consensus 136 ~~~~~l~~~G~~~-viG~~~~-----------------~~~A~~~gl~~ili~s~-esi~~a~~~A~~~~~~~ 189 (526)
T TIGR02329 136 SCVNDLRARGIGA-VVGAGLI-----------------TDLAEQAGLHGVFLYSA-DSVRQAFDDALDVARAT 189 (526)
T ss_pred HHHHHHHHCCCCE-EECChHH-----------------HHHHHHcCCceEEEecH-HHHHHHHHHHHHHHHHH
Confidence 9999999999654 6798843 2223221 123444444 88888888877765533
No 229
>PF09925 DUF2157: Predicted membrane protein (DUF2157); InterPro: IPR018677 This family of various hypothetical prokaryotic proteins has no known function.
Probab=35.37 E-value=1.9e+02 Score=27.69 Aligned_cols=47 Identities=26% Similarity=0.355 Sum_probs=27.0
Q ss_pred CCC-CHHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 002832 35 EGL-STEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALA 88 (875)
Q Consensus 35 ~GL-~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~ 88 (875)
+|+ |++|+++-++.|+.. +.+.+ ++....-.+-.+++.++++.++-.
T Consensus 7 ~GlI~~~q~~~i~~~~~~~---~~~~~----~~~~~l~~lGall~~~gii~fvA~ 54 (145)
T PF09925_consen 7 QGLITPEQAEAILAFYGER---PSRSS----WLARILLYLGALLLGLGIILFVAA 54 (145)
T ss_pred CCCCCHHHHHHHHHHhhcc---ccchh----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455 888888888999832 11112 222233334456667777776653
No 230
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=35.27 E-value=20 Score=30.84 Aligned_cols=22 Identities=32% Similarity=0.504 Sum_probs=16.8
Q ss_pred EecCCcCCCcEEEE-ecCCcccc
Q 002832 147 EDAAILVPGDIISV-KLGDIIPA 168 (875)
Q Consensus 147 I~~~~Lv~GDiv~l-~~G~~vPa 168 (875)
+...+|.+||.|.+ ++||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 45678999999998 58999995
No 231
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=35.14 E-value=18 Score=36.03 Aligned_cols=16 Identities=31% Similarity=0.225 Sum_probs=13.6
Q ss_pred EEecccCccccCcccc
Q 002832 330 LCSDKTGTLTLNKLSV 345 (875)
Q Consensus 330 i~~DKTGTLT~~~m~v 345 (875)
+|||.+||||.+.+.+
T Consensus 1 v~fD~DGTL~~~~~~f 16 (192)
T PF12710_consen 1 VIFDFDGTLTDSDSGF 16 (192)
T ss_dssp EEEESBTTTBSSHHHH
T ss_pred eEEecCcCeecCCCch
Confidence 6999999999998533
No 232
>COG3462 Predicted membrane protein [Function unknown]
Probab=34.76 E-value=1.8e+02 Score=26.23 Aligned_cols=16 Identities=13% Similarity=0.243 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHHH
Q 002832 793 LLLVLAFAVAQLIATL 808 (875)
Q Consensus 793 ~~l~~~~~~~~~~~~~ 808 (875)
.|+++.++..+..+.+
T Consensus 9 ~w~ligliavi~~v~l 24 (117)
T COG3462 9 AWLLIGLIAVIAVVGL 24 (117)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4555555544433333
No 233
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.16 E-value=56 Score=35.22 Aligned_cols=45 Identities=20% Similarity=0.226 Sum_probs=31.9
Q ss_pred cCCCCCCChHHHHHHHHhC-CCc---EEEEcCCCHHHH------HHHHHHhCCCC
Q 002832 489 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIA------KETGRRLGMGT 533 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~tA------~~ia~~lGi~~ 533 (875)
+.++++++.++-++++++. |++ ..+.-||++... ...|+++||..
T Consensus 9 ~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (285)
T PRK14191 9 LSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDS 63 (285)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456788899999999855 776 455679887543 45667788853
No 234
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.86 E-value=53 Score=35.41 Aligned_cols=138 Identities=16% Similarity=0.152 Sum_probs=74.1
Q ss_pred cCCCCCCChHHHHHHHHhCCCcE---EEEcCCCHHH------HHHHHHHhCCCCCCCC-------------------Ccc
Q 002832 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------AKETGRRLGMGTNMYP-------------------SSA 540 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~t------A~~ia~~lGi~~~~~~-------------------~~~ 540 (875)
+.+.+|++.++-++++++.|++. .+.-||++.. ....|+++||...... +..
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 90 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPK 90 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 44567888899999998888764 5566888644 3455677887532110 000
Q ss_pred cccc--------cccc--------------cCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHh--hCCCEEEEEcCCcc-
Q 002832 541 LLGQ--------NKDE--------------SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQ--ARKHICGMTGDGVN- 595 (875)
Q Consensus 541 ~~~~--------~~~~--------------~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq--~~g~~Vam~GDG~N- 595 (875)
+.|- ..++ .+....+..+...-..|.=|||.-=.++++..+ -.|..|.++|-|..
T Consensus 91 V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iV 170 (285)
T PRK14189 91 IHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIV 170 (285)
T ss_pred CCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCcc
Confidence 0000 0000 011111222222223466778877666666654 24899999999865
Q ss_pred ---CHHHHhhCCceEEe--cCccHH--HhhccCEEecC
Q 002832 596 ---DAPALKKADIGIAV--ADATDA--ARSASDIVLTE 626 (875)
Q Consensus 596 ---DapALk~AdVGIam--g~gtd~--ak~aADivL~~ 626 (875)
=+.+|.+.+.-+.+ ....+. .-..||+++.-
T Consensus 171 GkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 171 GKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred HHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 23345544444433 322222 23468887754
No 235
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.83 E-value=54 Score=35.33 Aligned_cols=137 Identities=16% Similarity=0.245 Sum_probs=74.3
Q ss_pred cCCCCCCChHHHHHHHHhCCCcE---EEEcCCCHH------HHHHHHHHhCCCCCCCCC-------------------cc
Q 002832 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLA------IAKETGRRLGMGTNMYPS-------------------SA 540 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~------tA~~ia~~lGi~~~~~~~-------------------~~ 540 (875)
+.+.+|++.++-++++++.|++. .+.-||++. .....|+++||....... ..
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 90 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPR 90 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 45667888999999999888864 455688874 345667788885321100 00
Q ss_pred cccc--------ccc-----------c---cCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHh--hCCCEEEEEcCCcc-
Q 002832 541 LLGQ--------NKD-----------E---SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQ--ARKHICGMTGDGVN- 595 (875)
Q Consensus 541 ~~~~--------~~~-----------~---~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq--~~g~~Vam~GDG~N- 595 (875)
+.|- ..+ . .+....+..+...-..|.=|||.-=.++++..+ -.|+.|.++|-+..
T Consensus 91 V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iV 170 (284)
T PRK14190 91 INGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIV 170 (284)
T ss_pred CCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCcc
Confidence 0000 000 0 011112222333333467788888777777765 24899999998843
Q ss_pred ---CHHHHhh--CCceEEecCccHH--HhhccCEEec
Q 002832 596 ---DAPALKK--ADIGIAVADATDA--ARSASDIVLT 625 (875)
Q Consensus 596 ---DapALk~--AdVGIamg~gtd~--ak~aADivL~ 625 (875)
=+.+|.. |.|-++-....+. .-..||+++.
T Consensus 171 G~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~ 207 (284)
T PRK14190 171 GKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIV 207 (284)
T ss_pred HHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEE
Confidence 1234433 4444443322221 2246777764
No 236
>PF15584 Imm44: Immunity protein 44
Probab=33.45 E-value=21 Score=31.00 Aligned_cols=19 Identities=32% Similarity=0.420 Sum_probs=15.9
Q ss_pred CCcEEEEecCCccccceEE
Q 002832 154 PGDIISVKLGDIIPADARL 172 (875)
Q Consensus 154 ~GDiv~l~~G~~vPaD~~l 172 (875)
+.+-..|+.|++|||||+-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4566788999999999986
No 237
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=33.41 E-value=21 Score=29.23 Aligned_cols=23 Identities=26% Similarity=0.481 Sum_probs=13.5
Q ss_pred EEECCeEEEEecCCcCCCcEEEE
Q 002832 138 VLRDGKWMEEDAAILVPGDIISV 160 (875)
Q Consensus 138 V~rdg~~~~I~~~~Lv~GDiv~l 160 (875)
|..||+...-....|.|||+|.+
T Consensus 35 V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 35 VKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HEETTB----SS----SSEEEEE
T ss_pred eEECCEEccccCCcCCCCCEEEE
Confidence 67789999999999999999999
No 238
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.89 E-value=67 Score=34.60 Aligned_cols=45 Identities=20% Similarity=0.301 Sum_probs=33.8
Q ss_pred cCCCCCCChHHHHHHHHhCCCc---EEEEcCCCHHHH------HHHHHHhCCCC
Q 002832 489 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIA------KETGRRLGMGT 533 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~ia~~lGi~~ 533 (875)
+.+++|++.++.++.+++.|++ ..+.-||++... ...|+++||..
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456788999999999988987 456679987543 55677889854
No 239
>PRK04980 hypothetical protein; Provisional
Probab=32.86 E-value=65 Score=28.96 Aligned_cols=57 Identities=25% Similarity=0.387 Sum_probs=38.9
Q ss_pred CCcEEEEECCeEEEEecCCcCCCcEEEEe--cCCccccceEEEecCCeeeec-----cccCCCCeeeec
Q 002832 133 APKSKVLRDGKWMEEDAAILVPGDIISVK--LGDIIPADARLLEGDPLKIDQ-----SALTGESLPVTK 194 (875)
Q Consensus 133 ~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~--~G~~vPaD~~ll~g~~l~Vde-----S~LTGEs~pv~K 194 (875)
..+.--+||+. .+..+|||++.+. .+++.-|+..+++-....+|| +..-|+|.+.-|
T Consensus 18 GkKTiTiRd~s-----e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~eLte~hA~qEg~sL~elk 81 (102)
T PRK04980 18 GRKTITIRDES-----ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDELNEKHAEQENMTLPELK 81 (102)
T ss_pred CCceEEeeCCc-----ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhhCCHHHHHHhCCCHHHHH
Confidence 34566677753 3679999999997 778888999999866433333 344566655444
No 240
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=32.49 E-value=1e+02 Score=25.44 Aligned_cols=32 Identities=22% Similarity=0.076 Sum_probs=24.3
Q ss_pred CCcEEEEECCeEEEEec---CCcCCCcEEEEecCC
Q 002832 133 APKSKVLRDGKWMEEDA---AILVPGDIISVKLGD 164 (875)
Q Consensus 133 ~~~~~V~rdg~~~~I~~---~~Lv~GDiv~l~~G~ 164 (875)
...++|-.+|..++++. .++.|||-|.+..|-
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 45678888999999864 458899999999994
No 241
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.17 E-value=1.4e+02 Score=32.11 Aligned_cols=64 Identities=17% Similarity=0.264 Sum_probs=39.5
Q ss_pred cEEEEeCHHHHHHHHHHHhh--CCCEEEEEcCC-ccCHH---HHhh--CCceEEecCccHH--HhhccCEEecC
Q 002832 563 DGFAGVFPEHKYEIVKRLQA--RKHICGMTGDG-VNDAP---ALKK--ADIGIAVADATDA--ARSASDIVLTE 626 (875)
Q Consensus 563 ~vfar~sP~~K~~iV~~lq~--~g~~Vam~GDG-~NDap---ALk~--AdVGIamg~gtd~--ak~aADivL~~ 626 (875)
.-|.-|||.-=.++++...- .|..|..+|-+ .-=-| .|.. |.|-++-....+. .-..||+++..
T Consensus 129 ~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 129 PGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEEC
Confidence 34667888877777776643 48999999999 33444 5544 4455554433222 22468888754
No 242
>COG5547 Small integral membrane protein [Function unknown]
Probab=31.91 E-value=2.3e+02 Score=22.49 Aligned_cols=49 Identities=20% Similarity=0.349 Sum_probs=26.2
Q ss_pred HHHHHHhHHHH--HHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002832 65 FLGFMWNPLSW--VMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNA 121 (875)
Q Consensus 65 ~~~~~~~~~~~--~l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~ 121 (875)
+++++.-|..- +.++.|++-+.++ -|- .+.++++.++...++++.+++.
T Consensus 3 flk~fkypIIgglvglliAili~t~G-------fwK-tilviil~~lGv~iGl~~~r~g 53 (62)
T COG5547 3 FLKKFKYPIIGGLVGLLIAILILTFG-------FWK-TILVIILILLGVYIGLYKKRTG 53 (62)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHH-------HHH-HHHHHHHHHHHHHHHHHHHhhh
Confidence 45666666642 2233333333332 333 3444455667778888887763
No 243
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.44 E-value=80 Score=34.03 Aligned_cols=138 Identities=16% Similarity=0.184 Sum_probs=75.5
Q ss_pred cCCCCCCChHHHHHHHHhCCCcE---EEEcCCCHHH------HHHHHHHhCCCCCCCCC-------------------cc
Q 002832 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------AKETGRRLGMGTNMYPS-------------------SA 540 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~t------A~~ia~~lGi~~~~~~~-------------------~~ 540 (875)
+.+.++++.++-++++++.|++. ++.-||++.. -...|+++||....... ..
T Consensus 9 ~a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 88 (282)
T PRK14166 9 LSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDS 88 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 34567888999999999888874 5667988754 34567788885321100 00
Q ss_pred cccc--------ccc-----------c---cCCcccHHHHhhh-CcEEEEeCHHHHHHHHHHHhh--CCCEEEEEcCCcc
Q 002832 541 LLGQ--------NKD-----------E---SIVALPVDELIEK-ADGFAGVFPEHKYEIVKRLQA--RKHICGMTGDGVN 595 (875)
Q Consensus 541 ~~~~--------~~~-----------~---~~~~~~~~~~~~~-~~vfar~sP~~K~~iV~~lq~--~g~~Vam~GDG~N 595 (875)
+.|- ..+ . .+....+..+... -.-|.-|||.-=.++++..+- .|+.|+++|-+..
T Consensus 89 V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~i 168 (282)
T PRK14166 89 VHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNI 168 (282)
T ss_pred CCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 0000 000 0 0111122223222 124667788877777776542 4899999999854
Q ss_pred ----CHHHHhhCCceEEe--cCccHH--HhhccCEEecC
Q 002832 596 ----DAPALKKADIGIAV--ADATDA--ARSASDIVLTE 626 (875)
Q Consensus 596 ----DapALk~AdVGIam--g~gtd~--ak~aADivL~~ 626 (875)
=+.+|.+.+--+.+ ..-.+. .-..||+++..
T Consensus 169 VGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsA 207 (282)
T PRK14166 169 VGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVA 207 (282)
T ss_pred chHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 23455444444433 322221 22468887743
No 244
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.04 E-value=78 Score=34.03 Aligned_cols=138 Identities=12% Similarity=0.201 Sum_probs=75.7
Q ss_pred cCCCCCCChHHHHHHHHhCCCc----EEEEcCCCHHHH------HHHHHHhCCCCCCCCC-------------------c
Q 002832 489 LFDPPRHDSAETIRRALNLGVN----VKMITGDQLAIA------KETGRRLGMGTNMYPS-------------------S 539 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~----v~miTGD~~~tA------~~ia~~lGi~~~~~~~-------------------~ 539 (875)
+.+++|++.++-+++++..|.+ ..+.-||++... ...|+++||....... .
T Consensus 10 iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~ 89 (278)
T PRK14172 10 VALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDN 89 (278)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456788899999999887743 356779887654 4557788885321100 0
Q ss_pred ccccc--------cccc-----------c---CCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhh--CCCEEEEEcCCcc
Q 002832 540 ALLGQ--------NKDE-----------S---IVALPVDELIEKADGFAGVFPEHKYEIVKRLQA--RKHICGMTGDGVN 595 (875)
Q Consensus 540 ~~~~~--------~~~~-----------~---~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~--~g~~Vam~GDG~N 595 (875)
.+.|- .+++ + +....+..+...-..|.-|||.-=.++++..+- .|+.|+++|.+..
T Consensus 90 ~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~ 169 (278)
T PRK14172 90 NVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKGEKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNI 169 (278)
T ss_pred CCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 00000 0000 0 111112222222234667888887777777653 5899999999854
Q ss_pred ----CHHHHhhCCceEEe--cCccHH--HhhccCEEecC
Q 002832 596 ----DAPALKKADIGIAV--ADATDA--ARSASDIVLTE 626 (875)
Q Consensus 596 ----DapALk~AdVGIam--g~gtd~--ak~aADivL~~ 626 (875)
=+-+|.+.+--+.+ ....+. .-..||+++..
T Consensus 170 VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 170 VGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVA 208 (278)
T ss_pred chHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 23455555544444 333222 12368888753
No 245
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=28.35 E-value=68 Score=28.63 Aligned_cols=31 Identities=19% Similarity=0.404 Sum_probs=24.9
Q ss_pred cEEEEECCeEEEEecCCcCCCcEEEEecCCcc
Q 002832 135 KSKVLRDGKWMEEDAAILVPGDIISVKLGDII 166 (875)
Q Consensus 135 ~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~v 166 (875)
.-+|.-||+.. -|+.++++||+|.|.-|...
T Consensus 33 ~GrV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 33 GGRVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred CCeEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 34566678766 79999999999999988654
No 246
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=28.08 E-value=4.3e+02 Score=27.86 Aligned_cols=51 Identities=24% Similarity=0.225 Sum_probs=41.6
Q ss_pred CCCeeEEEEeccCCCCCCChHHHHHHHHhC---CCcEEEEcCCCHHHHHHHHHH
Q 002832 478 GGPWQFIGLMPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIAKETGRR 528 (875)
Q Consensus 478 e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a---GI~v~miTGD~~~tA~~ia~~ 528 (875)
..+|.=+=+++=.+-+-||..++++.++.. |..|+=.+-|++..|++++.-
T Consensus 90 ~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 90 GTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred CCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 345555666666667899999999999999 999987888999999998864
No 247
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.53 E-value=83 Score=34.19 Aligned_cols=137 Identities=19% Similarity=0.218 Sum_probs=73.8
Q ss_pred cCCCCCCChHHHHHHHHhC-CCcE---EEEcCCCHHHH------HHHHHHhCCCCCCCCC-------------------c
Q 002832 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAIA------KETGRRLGMGTNMYPS-------------------S 539 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~a-GI~v---~miTGD~~~tA------~~ia~~lGi~~~~~~~-------------------~ 539 (875)
+.+.+|++.++.++.+++. |++. .+.-||++... ...|+++||....... .
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 89 (297)
T PRK14186 10 LAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDE 89 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 4566788899999999876 7764 56679887543 4566788885421100 0
Q ss_pred ccccc--------ccc-----------cc---CCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhh--CCCEEEEEcCCcc
Q 002832 540 ALLGQ--------NKD-----------ES---IVALPVDELIEKADGFAGVFPEHKYEIVKRLQA--RKHICGMTGDGVN 595 (875)
Q Consensus 540 ~~~~~--------~~~-----------~~---~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~--~g~~Vam~GDG~N 595 (875)
.+.|- ..+ .+ +....+.++...-.-|.-|||.-=.++++...- .|+.|+++|-+..
T Consensus 90 ~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~i 169 (297)
T PRK14186 90 RVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLHPLNLGRLVKGEPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSIL 169 (297)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 00000 000 00 111112222222223556788777777776642 4899999998843
Q ss_pred ----CHHHHhh--CCceEEecCccH--HHhhccCEEec
Q 002832 596 ----DAPALKK--ADIGIAVADATD--AARSASDIVLT 625 (875)
Q Consensus 596 ----DapALk~--AdVGIamg~gtd--~ak~aADivL~ 625 (875)
=+-+|.+ |.|-++-....+ ..-..|||++.
T Consensus 170 VGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIs 207 (297)
T PRK14186 170 VGKPLALMLLAANATVTIAHSRTQDLASITREADILVA 207 (297)
T ss_pred chHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 1334443 445444442222 12246888875
No 248
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=27.48 E-value=2.5e+02 Score=34.87 Aligned_cols=73 Identities=22% Similarity=0.186 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEe-cCCeeeecccc
Q 002832 107 LLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLE-GDPLKIDQSAL 185 (875)
Q Consensus 107 i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~-g~~l~VdeS~L 185 (875)
+++..+-++++.+...|+.+.+.++......-. ..+ .-|....+...+.+|=|.+++. |+.+-+|=-.+
T Consensus 213 ~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a-----~vi-----r~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi 282 (741)
T PRK11033 213 LLLFLIGERLEGYAASRARRGVSALMALVPETA-----TRL-----RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLL 282 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEE-----EEE-----ECCEEEEEEHHHCCCCCEEEECCCCEEecceEEE
Confidence 344555667787888888888877655433221 122 3577888888899999999886 44455666666
Q ss_pred CCCC
Q 002832 186 TGES 189 (875)
Q Consensus 186 TGEs 189 (875)
.|++
T Consensus 283 ~g~~ 286 (741)
T PRK11033 283 SPFA 286 (741)
T ss_pred ECcE
Confidence 6654
No 249
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.06 E-value=77 Score=34.20 Aligned_cols=46 Identities=17% Similarity=0.338 Sum_probs=33.3
Q ss_pred ccCCCCCCChHHHHHHHHhC-CCcE---EEEcCCCHH------HHHHHHHHhCCCC
Q 002832 488 PLFDPPRHDSAETIRRALNL-GVNV---KMITGDQLA------IAKETGRRLGMGT 533 (875)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~a-GI~v---~miTGD~~~------tA~~ia~~lGi~~ 533 (875)
.+.+.+|++.++-++.+++. |++. .++-||++. .-...|+++||..
T Consensus 15 ~iA~~i~~~l~~~i~~l~~~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~ 70 (287)
T PRK14176 15 ALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGIRA 70 (287)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCEE
Confidence 45667888999999999877 7763 566788864 3455677888853
No 250
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=26.96 E-value=46 Score=34.89 Aligned_cols=91 Identities=18% Similarity=0.153 Sum_probs=48.9
Q ss_pred CCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhh--Cc--EEEEeC
Q 002832 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEK--AD--GFAGVF 569 (875)
Q Consensus 494 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--vfar~s 569 (875)
-++..++++.|++.|++. ++|+.....+.......|.. .+...++. .+ ....-.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------------------~~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------------------YYAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------------------HHHHHHHHhCCcEecCCCCC
Confidence 368888999998899997 77776543332222222211 01111100 00 112222
Q ss_pred HHHHHHHHHHHhhC-CCEEEEEcCC-ccCHHHHhhCCce
Q 002832 570 PEHKYEIVKRLQAR-KHICGMTGDG-VNDAPALKKADIG 606 (875)
Q Consensus 570 P~~K~~iV~~lq~~-g~~Vam~GDG-~NDapALk~AdVG 606 (875)
|+-=....+.+... ...+.|+||. .+|..+=++|++-
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 32223333444322 2469999999 5999988888764
No 251
>PRK00208 thiG thiazole synthase; Reviewed
Probab=26.69 E-value=4.8e+02 Score=27.52 Aligned_cols=51 Identities=24% Similarity=0.210 Sum_probs=41.7
Q ss_pred CCCeeEEEEeccCCCCCCChHHHHHHHHhC---CCcEEEEcCCCHHHHHHHHHH
Q 002832 478 GGPWQFIGLMPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIAKETGRR 528 (875)
Q Consensus 478 e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a---GI~v~miTGD~~~tA~~ia~~ 528 (875)
..+|.=+=+++=.+-+-||..++++.++.. |..|+=.+-|++..|++++.-
T Consensus 90 ~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 90 GTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred CCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 455666666666677899999999999999 999986778889999988863
No 252
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=26.39 E-value=7e+02 Score=25.39 Aligned_cols=60 Identities=15% Similarity=0.121 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEec
Q 002832 107 LLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEG 175 (875)
Q Consensus 107 i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g 175 (875)
+++..+..+.+.+...|..+.++++...... +...+- .-|....+...|.+|=|.+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~----r~~~~~~i~~~~L~~GDiI~l~~ 62 (230)
T PF00122_consen 3 LFLILLSNIIEIWQEYRSKKQLKKLNNLNPQ-----KKVTVI----RDGRWQKIPSSELVPGDIIILKA 62 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSSS-----EEEEEE----ETTEEEEEEGGGT-TTSEEEEET
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHhccCCC-----ccEEEE----eccccccchHhhccceeeeeccc
Confidence 3444445555555556666665554333221 112222 22566677777777777776653
No 253
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=26.37 E-value=85 Score=28.78 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=27.4
Q ss_pred CCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCC
Q 002832 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 531 (875)
Q Consensus 494 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi 531 (875)
-+++.++++.+++.|++++.+|++.+ -...+.+-|.
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 45788999999999999999999875 2234554453
No 254
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.36 E-value=96 Score=33.62 Aligned_cols=45 Identities=9% Similarity=0.162 Sum_probs=32.7
Q ss_pred cCCCCCCChHHHHHHHHhC-CCcE---EEEcCCCHHH------HHHHHHHhCCCC
Q 002832 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAI------AKETGRRLGMGT 533 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~a-GI~v---~miTGD~~~t------A~~ia~~lGi~~ 533 (875)
+.+.+|++.++-++++++. |++. .+.-||++.. ....|+++||..
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (293)
T PRK14185 9 ISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKS 63 (293)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456788899999999877 7763 5667998754 345677888853
No 255
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=25.73 E-value=1.9e+02 Score=30.33 Aligned_cols=37 Identities=14% Similarity=0.193 Sum_probs=23.4
Q ss_pred CChHHHHHHHHhCCCcEEE-EcCCC-HHHHHHHHH-HhCC
Q 002832 495 HDSAETIRRALNLGVNVKM-ITGDQ-LAIAKETGR-RLGM 531 (875)
Q Consensus 495 ~~~~~~I~~l~~aGI~v~m-iTGD~-~~tA~~ia~-~lGi 531 (875)
++..+.++.|++.|++.++ ++-.. .+..+.++. ..|.
T Consensus 116 ee~~~~~~~~~~~g~~~i~~i~P~T~~~~i~~i~~~~~~~ 155 (242)
T cd04724 116 EEAEEFREAAKEYGLDLIFLVAPTTPDERIKKIAELASGF 155 (242)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCCC
Confidence 4777888999999998665 44332 344555555 3443
No 256
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=25.05 E-value=94 Score=26.71 Aligned_cols=13 Identities=38% Similarity=0.486 Sum_probs=0.0
Q ss_pred CcCCCcEEEEecC
Q 002832 151 ILVPGDIISVKLG 163 (875)
Q Consensus 151 ~Lv~GDiv~l~~G 163 (875)
+|+|||-|....|
T Consensus 36 ~Lk~Gd~VvT~gG 48 (82)
T PF02699_consen 36 SLKPGDEVVTIGG 48 (82)
T ss_dssp -------------
T ss_pred cCCCCCEEEECCc
Confidence 4555555555444
No 257
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=24.86 E-value=1.5e+02 Score=29.18 Aligned_cols=54 Identities=13% Similarity=0.197 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCH
Q 002832 442 EIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQL 519 (875)
Q Consensus 442 ~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~ 519 (875)
....-+..+++.+.+.|=-.++++-.. =-+.+.++++..++.|++|+-+||.+-
T Consensus 94 ~yd~vFsRqveA~g~~GDvLigISTSG------------------------NS~nVl~Ai~~Ak~~gm~vI~ltG~~G 147 (176)
T COG0279 94 GYDEVFSRQVEALGQPGDVLIGISTSG------------------------NSKNVLKAIEAAKEKGMTVIALTGKDG 147 (176)
T ss_pred cHHHHHHHHHHhcCCCCCEEEEEeCCC------------------------CCHHHHHHHHHHHHcCCEEEEEecCCC
Confidence 334556778888888888777776543 135788999999999999999999984
No 258
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.86 E-value=1.1e+02 Score=33.01 Aligned_cols=45 Identities=16% Similarity=0.278 Sum_probs=32.3
Q ss_pred cCCCCCCChHHHHHHHHhC-CCc---EEEEcCCCHHH------HHHHHHHhCCCC
Q 002832 489 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAI------AKETGRRLGMGT 533 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~t------A~~ia~~lGi~~ 533 (875)
+.+.+|++.++.++++++. |++ +.++-||+++. -...|+++||..
T Consensus 9 va~~i~~~lk~~v~~~~~~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (282)
T PRK14180 9 LSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDS 63 (282)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456788899999999877 776 45667888754 345567788853
No 259
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=24.74 E-value=1.2e+02 Score=25.89 Aligned_cols=46 Identities=13% Similarity=0.265 Sum_probs=36.6
Q ss_pred eccCCCCCCChHHHHHHHHhCCCcEEE-EcCCCHHHHHHHHHHhCCC
Q 002832 487 MPLFDPPRHDSAETIRRALNLGVNVKM-ITGDQLAIAKETGRRLGMG 532 (875)
Q Consensus 487 i~~~D~lr~~~~~~I~~l~~aGI~v~m-iTGD~~~tA~~ia~~lGi~ 532 (875)
+.+.+..++.+.+..+.|++.|+++.+ ..+.+..--..-|.+.|+.
T Consensus 7 i~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 7 IPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 445567788899999999999999988 5666777777778888874
No 260
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=24.50 E-value=76 Score=33.15 Aligned_cols=47 Identities=26% Similarity=0.298 Sum_probs=33.7
Q ss_pred EEeccCCCCCCChHHHHHHHHhCCCcEEEEc---CCCHH-HHHHHHHHhCC
Q 002832 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMIT---GDQLA-IAKETGRRLGM 531 (875)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miT---GD~~~-tA~~ia~~lGi 531 (875)
|++.-.+.+=|++.++|+.+++.|++++++| |.... .+..+.+..|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 4555556677799999999999999999999 44443 33344443566
No 261
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=24.41 E-value=1.2e+02 Score=33.60 Aligned_cols=58 Identities=24% Similarity=0.336 Sum_probs=39.2
Q ss_pred HHHHHHHhhCCCEEEEEcCCc--------------------cCHHHHhhCCc--eEEecC----ccHHHhh--ccCEEec
Q 002832 574 YEIVKRLQARKHICGMTGDGV--------------------NDAPALKKADI--GIAVAD----ATDAARS--ASDIVLT 625 (875)
Q Consensus 574 ~~iV~~lq~~g~~Vam~GDG~--------------------NDapALk~AdV--GIamg~----gtd~ak~--aADivL~ 625 (875)
..+++.|+++|..++.+.=|. .|-|+|=+-.. -+.++. |...+.+ .+|++++
T Consensus 55 ~~L~~~L~~~G~~~~IlSRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviil 134 (326)
T PF02606_consen 55 IWLARLLQARGYRPAILSRGYGRKSKGEPILVSDGSDAEEVGDEPLLLARKLPVPVIVGPDRVAAARAALKEFPADVIIL 134 (326)
T ss_pred HHHHHHHHhcCCceEEEcCCCCCCCCCCeEEEeCCCChhhhcCHHHHHHHhcCCcEEEeCcHHHHHHHHHHHCCCCEEEE
Confidence 567888999988887764432 37776644444 477762 3333333 4899999
Q ss_pred CCChhH
Q 002832 626 EPGLSV 631 (875)
Q Consensus 626 ~~~~~~ 631 (875)
||.|..
T Consensus 135 DDGfQh 140 (326)
T PF02606_consen 135 DDGFQH 140 (326)
T ss_pred cCCccc
Confidence 999986
No 262
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=24.16 E-value=1.6e+02 Score=24.36 Aligned_cols=49 Identities=31% Similarity=0.394 Sum_probs=31.9
Q ss_pred HHHHHhhCCCEEEEEcCC-ccCHHHHhhCCceEEe-cCc----cHHH--hhccCEEe
Q 002832 576 IVKRLQARKHICGMTGDG-VNDAPALKKADIGIAV-ADA----TDAA--RSASDIVL 624 (875)
Q Consensus 576 iV~~lq~~g~~Vam~GDG-~NDapALk~AdVGIam-g~g----td~a--k~aADivL 624 (875)
..+.+.-....+.|+||. ..|..+=+++++--.+ .+| .+.. ...+|+|+
T Consensus 13 a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv 69 (75)
T PF13242_consen 13 ALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVV 69 (75)
T ss_dssp HHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEE
T ss_pred HHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEE
Confidence 334443334569999999 9999999999864433 332 2221 25788887
No 263
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=23.92 E-value=1.7e+02 Score=26.71 Aligned_cols=48 Identities=23% Similarity=0.329 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecC
Q 002832 99 DFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLG 163 (875)
Q Consensus 99 ~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G 163 (875)
....++.++++..++-|+.-+..+|..++.+++. ++|+|||-|.-..|
T Consensus 3 ~~~~ll~lv~i~~i~yF~~iRPQkKr~K~~~~m~-----------------~~Lk~GD~VvT~gG 50 (109)
T PRK05886 3 SLVLFLPFLLIMGGFMYFASRRQRKAMQATIDLH-----------------ESLQPGDRVHTTSG 50 (109)
T ss_pred hHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH-----------------HhcCCCCEEEECCC
No 264
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=23.87 E-value=1.4e+02 Score=25.77 Aligned_cols=23 Identities=30% Similarity=0.349 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHhhccCCcEEEE
Q 002832 117 EENNAGNAAAALMASLAPKSKVL 139 (875)
Q Consensus 117 ~e~~~~~~~~~l~~~~~~~~~V~ 139 (875)
-++|+++..+++.+.+.+--+|+
T Consensus 23 pqkK~~k~~~~m~~~L~~Gd~Vv 45 (84)
T TIGR00739 23 PQRKRRKAHKKLIESLKKGDKVL 45 (84)
T ss_pred hHHHHHHHHHHHHHhCCCCCEEE
Confidence 34444444445554444444443
No 265
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=23.72 E-value=1.1e+02 Score=29.08 Aligned_cols=80 Identities=11% Similarity=0.175 Sum_probs=50.6
Q ss_pred HHHhcCCeEEEEEEEecCCCC-cCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCc--EEEEcCCC------HHHHH
Q 002832 453 KFAERGLRSLAVAYQEVPDGR-KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVN--VKMITGDQ------LAIAK 523 (875)
Q Consensus 453 ~~~~~G~rvl~~A~~~~~~~~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~--v~miTGD~------~~tA~ 523 (875)
.+...|++|+.+....-++.- ....+.+-.++|+=++.=.--+..+++++.|+++|.+ ++|+-|-- ...-.
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~ 103 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVE 103 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHH
Confidence 467799999988765422110 1112345567887777767777889999999999983 56666631 11123
Q ss_pred HHHHHhCCC
Q 002832 524 ETGRRLGMG 532 (875)
Q Consensus 524 ~ia~~lGi~ 532 (875)
+-.+++|+.
T Consensus 104 ~~l~~~Gv~ 112 (134)
T TIGR01501 104 KRFKEMGFD 112 (134)
T ss_pred HHHHHcCCC
Confidence 446778863
No 266
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=23.71 E-value=4.8e+02 Score=23.63 Aligned_cols=29 Identities=14% Similarity=0.209 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCcEEEEE
Q 002832 112 TISFIEENNAGNAAAALMASLAPKSKVLR 140 (875)
Q Consensus 112 ~~~~~~e~~~~~~~~~l~~~~~~~~~V~r 140 (875)
++.+..++|+++..+++.+.+.+--+|+-
T Consensus 33 f~~~RpqkK~~k~~~~~~~~Lk~Gd~VvT 61 (106)
T PRK05585 33 FLIIRPQQKRQKEHKKMLSSLAKGDEVVT 61 (106)
T ss_pred HHhccHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 33344455555555666655555555543
No 267
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=23.54 E-value=4.3e+02 Score=22.80 Aligned_cols=37 Identities=16% Similarity=0.012 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecC
Q 002832 110 NSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLG 163 (875)
Q Consensus 110 ~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G 163 (875)
...+-++.-+..+|..++.+++ -++|+|||-|....|
T Consensus 13 ~~i~yf~~~rpqkK~~k~~~~m-----------------~~~L~~Gd~VvT~gG 49 (84)
T TIGR00739 13 FLIFYFLIIRPQRKRRKAHKKL-----------------IESLKKGDKVLTIGG 49 (84)
T ss_pred HHHHHHheechHHHHHHHHHHH-----------------HHhCCCCCEEEECCC
Confidence 3444455656666665555443 267889998888777
No 268
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.40 E-value=1.1e+02 Score=32.89 Aligned_cols=45 Identities=16% Similarity=0.209 Sum_probs=31.3
Q ss_pred cCCCCCCChHHHHHHHHh-CCCcE---EEEcCCCHHH------HHHHHHHhCCCC
Q 002832 489 LFDPPRHDSAETIRRALN-LGVNV---KMITGDQLAI------AKETGRRLGMGT 533 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~-aGI~v---~miTGD~~~t------A~~ia~~lGi~~ 533 (875)
+...+|.+.++-++.|++ .|++. ++.-||++.. -...|+++||..
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~~ 63 (281)
T PRK14183 9 LSDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIYS 63 (281)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 345677888899999986 57763 5566988744 445677888853
No 269
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=23.32 E-value=7.2e+02 Score=24.41 Aligned_cols=94 Identities=14% Similarity=0.170 Sum_probs=55.9
Q ss_pred HHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHH
Q 002832 447 VHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG 526 (875)
Q Consensus 447 ~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia 526 (875)
++...+.+++.|--+..-+|..- + ....-++.|++.|++++...||- ..+..|-
T Consensus 43 ~~~i~~~ls~~G~i~~~R~Y~~a-------------~------------a~~~l~~~l~~~Gf~pv~~kG~~-Dv~laID 96 (160)
T TIGR00288 43 LDEIREILSEYGDIKIGKVLLNQ-------------Y------------ASDKLIEAVVNQGFEPIIVAGDV-DVRMAVE 96 (160)
T ss_pred HHHHHHHHHhcCCeEEEEEEech-------------h------------ccHHHHHHHHHCCceEEEecCcc-cHHHHHH
Confidence 44556777888877777776530 0 01245788999999999888842 1111111
Q ss_pred HHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH-HHHHHHHHHHhhCCCEEEEEcC
Q 002832 527 RRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP-EHKYEIVKRLQARKHICGMTGD 592 (875)
Q Consensus 527 ~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP-~~K~~iV~~lq~~g~~Vam~GD 592 (875)
- +.+.. -++++.|+=+|- .|=..+|+.+|++|..|-.+|-
T Consensus 97 a-me~~~-------------------------~~~iD~~vLvSgD~DF~~Lv~~lre~G~~V~v~g~ 137 (160)
T TIGR00288 97 A-MELIY-------------------------NPNIDAVALVTRDADFLPVINKAKENGKETIVIGA 137 (160)
T ss_pred H-HHHhc-------------------------cCCCCEEEEEeccHhHHHHHHHHHHCCCEEEEEeC
Confidence 0 00000 022345555543 4556789999999999977774
No 270
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=23.32 E-value=7.7e+02 Score=26.86 Aligned_cols=83 Identities=24% Similarity=0.324 Sum_probs=48.7
Q ss_pred ChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHH
Q 002832 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYE 575 (875)
Q Consensus 496 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~ 575 (875)
|+..++.++ +..+|+=|....+....|+..+++ +++|-.-+. -|-|=+.
T Consensus 91 DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP-------ViNgLtD~~--------------------HP~Q~LA 139 (310)
T COG0078 91 DTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP-------VINGLTDEF--------------------HPCQALA 139 (310)
T ss_pred HHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc-------eEccccccc--------------------CcHHHHH
Confidence 444444444 467899999999999999998875 333322110 1444332
Q ss_pred HHHHHhh-----CCCEEEEEcCCccCHH--HHhhCCceEEe
Q 002832 576 IVKRLQA-----RKHICGMTGDGVNDAP--ALKKADIGIAV 609 (875)
Q Consensus 576 iV~~lq~-----~g~~Vam~GDG~NDap--ALk~AdVGIam 609 (875)
=+-.+++ +|.+++++|||-|=+- ++..|-.|+-+
T Consensus 140 Dl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv 180 (310)
T COG0078 140 DLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDV 180 (310)
T ss_pred HHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeE
Confidence 2222222 4789999999955443 33444444433
No 271
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.29 E-value=1.2e+02 Score=32.66 Aligned_cols=45 Identities=18% Similarity=0.275 Sum_probs=32.8
Q ss_pred cCCCCCCChHHHHHHHHhCCCcE---EEEcCCCHHH------HHHHHHHhCCCC
Q 002832 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------AKETGRRLGMGT 533 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~t------A~~ia~~lGi~~ 533 (875)
+.++++++.++.++.+++.|++. .+.-||++.. -...|+++||..
T Consensus 11 va~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (284)
T PRK14193 11 TADEIKADLAERVAALKEKGITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITS 64 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 45567888999999998888875 4557888643 445677888853
No 272
>COG1862 YajC Preprotein translocase subunit YajC [Intracellular trafficking and secretion]
Probab=23.07 E-value=1.6e+02 Score=26.20 Aligned_cols=47 Identities=21% Similarity=0.194 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecC
Q 002832 100 FVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLG 163 (875)
Q Consensus 100 ~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G 163 (875)
...++.++++..++-|+.-+..++..++.++++ ++|++||-|....|
T Consensus 9 ~~~ll~~vl~~~ifyFli~RPQrKr~K~~~~ml-----------------~sL~kGD~VvT~gG 55 (97)
T COG1862 9 LVLLLPLVLIFAIFYFLIIRPQRKRMKEHQELL-----------------NSLKKGDEVVTIGG 55 (97)
T ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH-----------------HhccCCCEEEEcCC
No 273
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=23.00 E-value=3.2e+02 Score=26.49 Aligned_cols=21 Identities=14% Similarity=0.129 Sum_probs=15.4
Q ss_pred eEEEEecCCcCCCcEEEEecC
Q 002832 143 KWMEEDAAILVPGDIISVKLG 163 (875)
Q Consensus 143 ~~~~I~~~~Lv~GDiv~l~~G 163 (875)
+...+++..+.-|-+|+++..
T Consensus 97 ~~v~VNst~l~dG~iVki~~~ 117 (149)
T PF11694_consen 97 EEVYVNSTALTDGMIVKIGDK 117 (149)
T ss_pred heEEEecccccCCeEEEECCc
Confidence 456678888888888877743
No 274
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=22.95 E-value=1.3e+02 Score=27.88 Aligned_cols=80 Identities=15% Similarity=0.144 Sum_probs=53.5
Q ss_pred HHHHhcCCeEEEEEEEecCCCC--cCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCC-cE-EEEcCCCHHHHHHHHH
Q 002832 452 DKFAERGLRSLAVAYQEVPDGR--KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV-NV-KMITGDQLAIAKETGR 527 (875)
Q Consensus 452 ~~~~~~G~rvl~~A~~~~~~~~--~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI-~v-~miTGD~~~tA~~ia~ 527 (875)
.-+...|++|+.+.-.. +.++ ....+.+-.++++-.......+.+++.+++|++.|. ++ +++-|..+.--.+-.+
T Consensus 21 ~~l~~~G~~vi~lG~~v-p~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~ 99 (122)
T cd02071 21 RALRDAGFEVIYTGLRQ-TPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLK 99 (122)
T ss_pred HHHHHCCCEEEECCCCC-CHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHH
Confidence 34678999998876542 2111 111234457888888888899999999999999987 44 5566655543345556
Q ss_pred HhCCC
Q 002832 528 RLGMG 532 (875)
Q Consensus 528 ~lGi~ 532 (875)
+.|+.
T Consensus 100 ~~G~d 104 (122)
T cd02071 100 EMGVA 104 (122)
T ss_pred HCCCC
Confidence 78874
No 275
>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=22.86 E-value=1.2e+02 Score=28.52 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEe
Q 002832 115 FIEENNAGNAAAALMASLAPKSKVLRDGKWMEED 148 (875)
Q Consensus 115 ~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~ 148 (875)
++...|.+|+..++.+.--+-..+..|-+|-+++
T Consensus 50 ~lcssRKkKaaAAi~eediQfinpyqDqqw~~v~ 83 (189)
T PF05568_consen 50 YLCSSRKKKAAAAIEEEDIQFINPYQDQQWAGVT 83 (189)
T ss_pred HHHhhhhHHHHhhhhhhcccccCcccchhhccCC
Confidence 4444556666677665555555666776766554
No 276
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=22.82 E-value=28 Score=36.64 Aligned_cols=18 Identities=11% Similarity=0.449 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 002832 719 ILGGYLAMMTVIFFWAAY 736 (875)
Q Consensus 719 ~~g~~~~~~~~~~~~~~~ 736 (875)
.+|.+.-++.+++|++..
T Consensus 26 ~~~~llll~ail~w~~ii 43 (381)
T PF05297_consen 26 LFGLLLLLVAILVWFFII 43 (381)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 445554555555544443
No 277
>cd02433 Nodulin-21_like_2 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=22.69 E-value=2.6e+02 Score=29.28 Aligned_cols=27 Identities=22% Similarity=0.242 Sum_probs=16.0
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHHhcCCC
Q 002832 24 EEVFETLRCNKEGLSTEAAEERLTIFGYN 52 (875)
Q Consensus 24 ~~~~~~l~~~~~GL~~~e~~~r~~~~G~N 52 (875)
+|+.+.+. ++|++++++++--++.-.|
T Consensus 101 ~el~~iy~--~~G~~~~~a~~~~~~l~~~ 127 (234)
T cd02433 101 AELALIYR--AKGLDEEEAKRVASQLMND 127 (234)
T ss_pred HHHHHHHH--HcCCCHHHHHHHHHHHHhC
Confidence 34444443 4699998888655444443
No 278
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.66 E-value=1.2e+02 Score=32.74 Aligned_cols=138 Identities=17% Similarity=0.205 Sum_probs=72.4
Q ss_pred cCCCCCCChHHHHHHHHhC-CCcE---EEEcCCCHH------HHHHHHHHhCCCCCCCC-------------------Cc
Q 002832 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLA------IAKETGRRLGMGTNMYP-------------------SS 539 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~a-GI~v---~miTGD~~~------tA~~ia~~lGi~~~~~~-------------------~~ 539 (875)
+.+.++++.++.++++++. |++. ++.-||++. .-...|+++||...... +.
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D~ 89 (288)
T PRK14171 10 LANEILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLDN 89 (288)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCC
Confidence 3456677888888888777 7763 556687753 34556677887432110 00
Q ss_pred ccccc--------ccc-----------c---cCCcccHHHHhhhC-cEEEEeCHHHHHHHHHHHhh--CCCEEEEEcCCc
Q 002832 540 ALLGQ--------NKD-----------E---SIVALPVDELIEKA-DGFAGVFPEHKYEIVKRLQA--RKHICGMTGDGV 594 (875)
Q Consensus 540 ~~~~~--------~~~-----------~---~~~~~~~~~~~~~~-~vfar~sP~~K~~iV~~lq~--~g~~Vam~GDG~ 594 (875)
.+.|- ..+ . .+....+..+...- ..|.-|||.-=.++++..+- .|+.|.++|-+.
T Consensus 90 ~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~ 169 (288)
T PRK14171 90 EISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHPLNVGYLHSGISQGFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSN 169 (288)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhccCcccccccCCccchhhhhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC
Confidence 00000 000 0 01112222233222 45677888876666665542 488999999884
Q ss_pred c----CHHHHhhCC--ceEEecCccHHH--hhccCEEecC
Q 002832 595 N----DAPALKKAD--IGIAVADATDAA--RSASDIVLTE 626 (875)
Q Consensus 595 N----DapALk~Ad--VGIamg~gtd~a--k~aADivL~~ 626 (875)
. =+.+|.+.| |-++=+...+.. -..||+++..
T Consensus 170 iVGkPla~lL~~~~ATVtichs~T~~L~~~~~~ADIvV~A 209 (288)
T PRK14171 170 IVGKPLSALLLKENCSVTICHSKTHNLSSITSKADIVVAA 209 (288)
T ss_pred cchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 3 133454444 444433333321 2368888753
No 279
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=22.46 E-value=2.5e+02 Score=31.54 Aligned_cols=77 Identities=14% Similarity=0.066 Sum_probs=46.9
Q ss_pred EEEEeCHH-HHHHHHHHHhhCCCEEEEEc-CCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHH
Q 002832 564 GFAGVFPE-HKYEIVKRLQARKHICGMTG-DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA 641 (875)
Q Consensus 564 vfar~sP~-~K~~iV~~lq~~g~~Vam~G-DG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~ 641 (875)
+..-.+.+ .=.++.+..++.|+.|+.-+ |..|.+--|..-=. .+| -...|+| +|++-..+-..++.+-.
T Consensus 219 LL~SAt~e~Ny~~ia~lAk~yg~~Vvv~s~~Din~ak~Ln~kL~--~~G------v~~eDIV-lDP~t~alG~Gieya~s 289 (389)
T TIGR00381 219 LLASANLDLDYEKIANAAKKYGHVVLSWTIMDINMQKTLNRYLL--KRG------LMPRDIV-MDPTTCALGYGIEFSIT 289 (389)
T ss_pred EEEecCchhhHHHHHHHHHHhCCeEEEEcCCcHHHHHHHHHHHH--HcC------CCHHHEE-EcCCCccccCCHHHHHH
Confidence 55666777 44567777788898766655 88887766543300 111 1123654 46666666677776666
Q ss_pred HHHHHHHH
Q 002832 642 IFQRMKNY 649 (875)
Q Consensus 642 ~~~~i~~~ 649 (875)
.+.+||..
T Consensus 290 ~~erIRra 297 (389)
T TIGR00381 290 NMERIRLS 297 (389)
T ss_pred HHHHHHHH
Confidence 77777643
No 280
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=22.38 E-value=1.6e+02 Score=32.70 Aligned_cols=58 Identities=26% Similarity=0.405 Sum_probs=37.8
Q ss_pred HHHHHHHhhCCCEEEEEcCC-------------------ccCHHHHhhC--CceEEecC----ccHHH-hh--ccCEEec
Q 002832 574 YEIVKRLQARKHICGMTGDG-------------------VNDAPALKKA--DIGIAVAD----ATDAA-RS--ASDIVLT 625 (875)
Q Consensus 574 ~~iV~~lq~~g~~Vam~GDG-------------------~NDapALk~A--dVGIamg~----gtd~a-k~--aADivL~ 625 (875)
..+++.|+++|..++.+.=| +.|-|.|=+- ++-+.++. |...+ .+ .+|++|+
T Consensus 76 ~~La~~l~~~G~~~~IlSRGYg~~~~~~~~v~~~~~~~~~GDEpllla~~~~~~V~V~~dR~~aa~~l~~~~~~~dviIl 155 (338)
T PRK01906 76 IALVDALRAAGFTPGVVSRGYGAKIKHPTAVTPASRASDAGDEPLLIARRTDAPVWVCPDRVAAAQALLAAHPGVDVIVS 155 (338)
T ss_pred HHHHHHHHHcCCceEEEecCCCCCCCCCeEEcCCCChhhhCcHHHHhhhcCCCeEEEeCcHHHHHHHHHHhCCCCCEEEE
Confidence 45678888888877776433 3577766433 45566662 22222 22 4899999
Q ss_pred CCChhH
Q 002832 626 EPGLSV 631 (875)
Q Consensus 626 ~~~~~~ 631 (875)
||.|..
T Consensus 156 DDGfQH 161 (338)
T PRK01906 156 DDGLQH 161 (338)
T ss_pred CCCCcc
Confidence 999987
No 281
>PF13404 HTH_AsnC-type: AsnC-type helix-turn-helix domain; PDB: 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2VC1_B 2QZ8_A 2W29_C 2IVM_B 2VBX_B ....
Probab=22.26 E-value=1.2e+02 Score=22.34 Aligned_cols=40 Identities=23% Similarity=0.304 Sum_probs=23.8
Q ss_pred CCcchhHHHHhhhhccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHh
Q 002832 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTI 48 (875)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~ 48 (875)
||+.+.++=+..++. ...|..++.+. -|+|..++.+|.++
T Consensus 1 lD~~D~~Il~~Lq~d---~r~s~~~la~~-----lglS~~~v~~Ri~r 40 (42)
T PF13404_consen 1 LDELDRKILRLLQED---GRRSYAELAEE-----LGLSESTVRRRIRR 40 (42)
T ss_dssp --HHHHHHHHHHHH----TTS-HHHHHHH-----HTS-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHc---CCccHHHHHHH-----HCcCHHHHHHHHHH
Confidence 455555555444443 45677777665 48999999999875
No 282
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=22.18 E-value=4.4e+02 Score=26.33 Aligned_cols=15 Identities=47% Similarity=0.348 Sum_probs=13.0
Q ss_pred CCCCCHHHHHHHHHh
Q 002832 34 KEGLSTEAAEERLTI 48 (875)
Q Consensus 34 ~~GL~~~e~~~r~~~ 48 (875)
...++.+|+.+|+++
T Consensus 79 ~~~~~~~ea~~~L~~ 93 (193)
T PF06738_consen 79 AGQLSLEEAIERLDE 93 (193)
T ss_pred cCCCCHHHHHHHHHH
Confidence 368899999999987
No 283
>cd06167 LabA_like LabA_like proteins. A well conserved group of bacterial proteins with no defined function. LabA, a member from Synechococcus elongatus PCC 7942, has been shown to play a role in cyanobacterial circadian timing. It is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system. In particular, LabA seems necessary for KaiC-dependent repression of gene expression.
Probab=21.98 E-value=2.7e+02 Score=26.28 Aligned_cols=28 Identities=18% Similarity=0.205 Sum_probs=18.8
Q ss_pred HHHHHHHhhCCCEEEEEcCCccCHHHHh
Q 002832 574 YEIVKRLQARKHICGMTGDGVNDAPALK 601 (875)
Q Consensus 574 ~~iV~~lq~~g~~Vam~GDG~NDapALk 601 (875)
...++.+|++|..|..+|-...-++.|+
T Consensus 113 ~~~i~~lr~~G~~V~v~~~~~~~s~~L~ 140 (149)
T cd06167 113 VPLVERLRELGKRVIVVGFEAKTSRELR 140 (149)
T ss_pred HHHHHHHHHcCCEEEEEccCccChHHHH
Confidence 4456777777887777777655555554
No 284
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.81 E-value=1.2e+02 Score=32.85 Aligned_cols=44 Identities=11% Similarity=0.195 Sum_probs=31.5
Q ss_pred cCCCCCCChHHHHHHHHhC-CCc---EEEEcCCCHHH------HHHHHHHhCCC
Q 002832 489 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAI------AKETGRRLGMG 532 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~t------A~~ia~~lGi~ 532 (875)
+.+++|++.++.+++|++. |++ .++.-||++.. -...|+++||.
T Consensus 11 va~~i~~~lk~~v~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~ 64 (285)
T PRK10792 11 IAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEVGFV 64 (285)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 4556788999999999877 553 35667888754 34567788885
No 285
>PF03453 MoeA_N: MoeA N-terminal region (domain I and II); InterPro: IPR005110 This entry represents the N-terminal and linker domains of the MoeA protein. Proteins in this family contain two structural domains, one of which contains the conserved DGXA motif. These two domains are found in proteins involved in biosynthesis of molybdopterin cofactor however the exact molecular function of this region is uncertain. The majority of molybdenum-containing enzymes utilise a molybdenum cofactor (MoCF or Moco) consisting of a Mo atom coordinated via a cis-dithiolene moiety to molybdopterin (MPT). MoCF is ubiquitous in nature, and the pathway for MoCF biosynthesis is conserved in all three domains of life. MoCF-containing enzymes function as oxidoreductases in carbon, nitrogen, and sulphur metabolism [, ]. In Escherichia coli, biosynthesis of MoCF is a three stage process. It begins with the MoaA and MoaC conversion of GTP to the meta-stable pterin intermediate precursor Z. The second stage involves MPT synthase (MoaD and MoaE), which converts precursor Z to MPT; MoeB is involved in the recycling of MPT synthase. The final step in MoCF synthesis is the attachment of mononuclear Mo to MPT, a process that requires MoeA and which is enhanced by MogA in an Mg2 ATP-dependent manner []. MoCF is the active co-factor in eukaryotic and some prokaryotic molybdo-enzymes, but the majority of bacterial enzymes requiring MoCF, need a modification of MTP for it to be active; MobA is involved in the attachment of a nucleotide monophosphate to MPT resulting in the MGD co-factor, the active co-factor for most prokaryotic molybdo-enzymes. Bacterial two-hybrid studies have revealed the close interactions between MoeA, MogA, and MobA in the synthesis of MoCF []. Moreover the close functional association of MoeA and MogA in the synthesis of MoCF is supported by fact that the known eukaryotic homologues to MoeA and MogA exist as fusion proteins: CNX1 (Q39054 from SWISSPROT) of Arabidopsis thaliana (Mouse-ear cress), mammalian Gephryin (e.g. Q9NQX3 from SWISSPROT) and Drosophila melanogaster (Fruit fly) Cinnamon (P39205 from SWISSPROT) [].; GO: 0032324 molybdopterin cofactor biosynthetic process; PDB: 1UZ5_A 1T3E_B 2FTS_A 2FU3_A 1XI8_A 1WU2_A 2NRS_A 2NRP_B 2NRO_A 2NQV_A ....
Probab=21.80 E-value=1.1e+02 Score=30.02 Aligned_cols=58 Identities=26% Similarity=0.452 Sum_probs=30.1
Q ss_pred ecCCcCCCcEEEEecCCccc--cceEEEecCCeeeeccccCCCCeeeecC--C-CCceeecceeccCce
Q 002832 148 DAAILVPGDIISVKLGDIIP--ADARLLEGDPLKIDQSALTGESLPVTKG--P-GDSVYSGSTCKQGEI 211 (875)
Q Consensus 148 ~~~~Lv~GDiv~l~~G~~vP--aD~~ll~g~~l~VdeS~LTGEs~pv~K~--~-~~~v~~Gt~v~~G~~ 211 (875)
+...|.+|.-+.+..|..+| ||++|-.-.. .+.+. ..-+.+. + .|+-..|+-+..|+.
T Consensus 80 ~~~~l~~g~av~I~TGa~vP~g~DaVV~~E~~-~~~~~-----~i~i~~~~~~g~nIr~~G~di~~G~~ 142 (162)
T PF03453_consen 80 PPIPLQPGEAVRIMTGAPVPEGADAVVPIEDT-EVEGD-----EIRILKPVKPGQNIRPKGEDIKKGEV 142 (162)
T ss_dssp -SSB--TTEEEEE-TTSB--TT-SEEEEGGGC-EEETT-----EEEESS--STTTTEE-TTSSB-TTSE
T ss_pred ccccCCCCeEEEEeCCCccCCCCCEEEEehhe-eeccc-----EEEEeeccCCCCcEEeCCccccCCCE
Confidence 34789999999999999999 8888754433 33332 3333222 2 345567777777763
No 286
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=21.77 E-value=59 Score=25.49 Aligned_cols=12 Identities=33% Similarity=0.639 Sum_probs=10.4
Q ss_pred CCCcEEEEecCC
Q 002832 153 VPGDIISVKLGD 164 (875)
Q Consensus 153 v~GDiv~l~~G~ 164 (875)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999885
No 287
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=21.51 E-value=2e+02 Score=28.42 Aligned_cols=81 Identities=20% Similarity=0.304 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCc---EEEEcCCCHHHH
Q 002832 446 RVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIA 522 (875)
Q Consensus 446 ~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~---v~miTGD~~~tA 522 (875)
+..+.++++...|.+++.++-.. +.....=..-+|+=.+.---||-....=+.|++.+++ |+|+ ||...|=
T Consensus 50 e~~~W~~e~k~~gi~v~vvSNn~-----e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmV-GDqL~TD 123 (175)
T COG2179 50 ELRAWLAELKEAGIKVVVVSNNK-----ESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMV-GDQLFTD 123 (175)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCC-----HHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEE-cchhhhh
Confidence 34456778889999999887422 1111111122344445556677777777888888885 7777 9999999
Q ss_pred HHHHHHhCCC
Q 002832 523 KETGRRLGMG 532 (875)
Q Consensus 523 ~~ia~~lGi~ 532 (875)
.--|...|+-
T Consensus 124 Vlggnr~G~~ 133 (175)
T COG2179 124 VLGGNRAGMR 133 (175)
T ss_pred hhcccccCcE
Confidence 8888888874
No 288
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=21.40 E-value=1.9e+02 Score=30.35 Aligned_cols=104 Identities=15% Similarity=0.136 Sum_probs=54.9
Q ss_pred CChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHH-
Q 002832 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHK- 573 (875)
Q Consensus 495 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K- 573 (875)
++..+++++||+.|..+.++|-=... ...+=..+|+... -+.++.+ +.+ .-..|+-+
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~--fD~vv~S------------------~e~-g~~KPDp~I 173 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAY--FDFVVES------------------CEV-GLEKPDPRI 173 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHh--hhhhhhh------------------hhh-ccCCCChHH
Confidence 45569999999999888888743322 1244445555311 0111111 110 00112221
Q ss_pred -HHHHHHHhhCCCEEEEEcCC-ccCHHHHhhCCc-eEEecCccHHHhhcc
Q 002832 574 -YEIVKRLQARKHICGMTGDG-VNDAPALKKADI-GIAVADATDAARSAS 620 (875)
Q Consensus 574 -~~iV~~lq~~g~~Vam~GDG-~NDapALk~AdV-GIamg~gtd~ak~aA 620 (875)
...++.+.-+-.-+.++||. .||..+-+.++. ++=+.++....++..
T Consensus 174 f~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~~ 223 (237)
T KOG3085|consen 174 FQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKELE 223 (237)
T ss_pred HHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhhh
Confidence 23334444445568999998 599988777764 333344444444433
No 289
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=21.04 E-value=1.5e+02 Score=32.91 Aligned_cols=46 Identities=15% Similarity=0.213 Sum_probs=34.0
Q ss_pred ccCCCCCCChHHHHHHHHhC-CCc---EEEEcCCCHHHH------HHHHHHhCCCC
Q 002832 488 PLFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIA------KETGRRLGMGT 533 (875)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~tA------~~ia~~lGi~~ 533 (875)
.+.+.+|.+.++.++++++. |++ .+++-||++... ...|+++||..
T Consensus 63 ~vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~ 118 (345)
T PLN02897 63 VIAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKS 118 (345)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEE
Confidence 45677889999999999887 776 356779887544 45577888853
No 290
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=20.73 E-value=3.7e+02 Score=26.66 Aligned_cols=12 Identities=25% Similarity=0.299 Sum_probs=6.1
Q ss_pred HHHHhcCCCccc
Q 002832 44 ERLTIFGYNKLE 55 (875)
Q Consensus 44 ~r~~~~G~N~i~ 55 (875)
+-++.|+.++-+
T Consensus 59 ~i~~~~~i~~~~ 70 (181)
T PF08006_consen 59 EILAEYSIKEEE 70 (181)
T ss_pred HHHHhhhhhhhh
Confidence 334556655543
No 291
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.52 E-value=1.5e+02 Score=32.03 Aligned_cols=45 Identities=22% Similarity=0.329 Sum_probs=31.3
Q ss_pred cCCCCCCChHHHHHHHHhCC-Cc---EEEEcCCCHHH------HHHHHHHhCCCC
Q 002832 489 LFDPPRHDSAETIRRALNLG-VN---VKMITGDQLAI------AKETGRRLGMGT 533 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aG-I~---v~miTGD~~~t------A~~ia~~lGi~~ 533 (875)
+.+++|++.++.++++++.| .+ ..+.-||+++. -...|+++||..
T Consensus 11 ia~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 65 (284)
T PRK14177 11 LSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGS 65 (284)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 45677888999999998764 32 45666888643 345677888853
No 292
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.29 E-value=1.6e+02 Score=31.91 Aligned_cols=45 Identities=16% Similarity=0.153 Sum_probs=32.4
Q ss_pred cCCCCCCChHHHHHHHHhC-CCcE---EEEcCCCHHH------HHHHHHHhCCCC
Q 002832 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAI------AKETGRRLGMGT 533 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~a-GI~v---~miTGD~~~t------A~~ia~~lGi~~ 533 (875)
+.+.+|++.++-++.+++. |++. .+.-||++.. ....|+++||..
T Consensus 10 va~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (294)
T PRK14187 10 IANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRS 64 (294)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 4456788899999999876 7763 5667888754 455677888854
No 293
>TIGR00967 3a0501s007 preprotein translocase, SecY subunit.
Probab=20.24 E-value=6e+02 Score=29.08 Aligned_cols=90 Identities=17% Similarity=0.146 Sum_probs=46.9
Q ss_pred CCCCHHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHH----HHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHH
Q 002832 35 EGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLS----WVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLIN 110 (875)
Q Consensus 35 ~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~----~~l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~ 110 (875)
.+++++|+.+++++.|.=-.-.++-+.-.+.++.....+. .++-+.+++..+++...+.+ ......+.-++++++
T Consensus 314 ~~~~p~~iA~~lkk~g~~IpGiRpG~~T~~yL~~~i~~~t~~Gai~l~~ia~~p~l~~~~~~~~-~~~~~ggtsiLI~Vg 392 (410)
T TIGR00967 314 LQLNPEDMAKNLKKQGMFIPGIRPGKMTEKYLKRVIPRLTFVGSLFLGLIALLPNFLGAIGGLP-TSKGLGGTSLLIVVG 392 (410)
T ss_pred HccCHHHHHHHHHHCCCcCCCcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccCchHhHHHHHH
Confidence 6899999999999988554433322222344444433333 23333344443343211100 000011333455667
Q ss_pred HHHHHHHHHHHHHHH
Q 002832 111 STISFIEENNAGNAA 125 (875)
Q Consensus 111 ~~~~~~~e~~~~~~~ 125 (875)
..++.+++.++++..
T Consensus 393 v~~~~~~qi~~~~~~ 407 (410)
T TIGR00967 393 VAIDTYKQLESYLIS 407 (410)
T ss_pred HHHHHHHHHHHHHHH
Confidence 788888888877654
No 294
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=20.15 E-value=83 Score=28.98 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=22.9
Q ss_pred CCChHHHHHHHHhCCCcEEEEcCCCH
Q 002832 494 RHDSAETIRRALNLGVNVKMITGDQL 519 (875)
Q Consensus 494 r~~~~~~I~~l~~aGI~v~miTGD~~ 519 (875)
-+++.++++.+|+.|++|+.+|+++.
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~ 85 (128)
T cd05014 60 TDELLNLLPHLKRRGAPIIAITGNPN 85 (128)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 35788999999999999999999764
Done!