BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002834
(875 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNN9|PP370_ARATH Putative pentatricopeptide repeat-containing protein At5g08490
OS=Arabidopsis thaliana GN=PCMP-E32 PE=3 SV=1
Length = 849
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/830 (55%), Positives = 617/830 (74%), Gaps = 3/830 (0%)
Query: 42 NHQLFSAVLKSCTSLADILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLF 101
+H++F V+K+C S++D+ G+ALHG V KLGHI+C VSK++LN+YAKC +DDC K+F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 102 GQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGG 161
Q+D+ DPV WNI+L+G + S M F MH D+PKP+SVT AIVL C RLG
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSC--GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGD 137
Query: 162 IFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVH-DAYSVFDSIEDKDVVSWNAVIS 220
+ GKS+H+Y+IK GLE+ TLVGN+L SMYAK G + DAY+ FD I DKDVVSWNA+I+
Sbjct: 138 SYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIA 197
Query: 221 GLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRA 280
G SEN ++ DAFR F ML EP +PNYATI N+LP+CAS+D+++ GR+IH YV++R+
Sbjct: 198 GFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRS 257
Query: 281 ELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLF 340
L V VCN+LVSFYLR GR EEA LF RM S+DLVSWN +IAGYASN EW KA LF
Sbjct: 258 WLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLF 317
Query: 341 CELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYA 400
L+ K + PDSVT++S+LP CA L +L GKEIH Y LRH YL ED +VGNAL+SFYA
Sbjct: 318 HNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYA 377
Query: 401 KCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILT 460
+ D AAY F ++ +D+ISWN++LDAF++S QFLNLL+ +L E I DS+TIL+
Sbjct: 378 RFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILS 437
Query: 461 IIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLL 520
++ FC V G VKE HGY +K GLL + E +GNA+LDAYAKC N++YA +F L
Sbjct: 438 LLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLS 497
Query: 521 EKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFL 580
E+R LV++N ++SGY N GS D+A M F+ + DLT W+LM+R+YAE+ PN+A+ +F
Sbjct: 498 ERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFR 557
Query: 581 KLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDGVRLNGALLHLYAKCGS 640
++QA+GM+P+ VTIM+LLPVC+Q+AS+HL+RQCHGY+IR +RL G LL +YAKCGS
Sbjct: 558 EIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGTLLDVYAKCGS 617
Query: 641 IFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSA 700
+ A +FQ ++D+VM TAM+ GYA+HG GK AL ++S M E + PDHV IT +L+A
Sbjct: 618 LKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTA 677
Query: 701 CSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCN 760
C HAGL+ +GL+I+ SI V G+KPT EQYA VDL+ARGG++ DAYS V +MPVE + N
Sbjct: 678 CCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNAN 737
Query: 761 VWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMK 820
+WGTLL AC ++ ++LG VAN L + E+D+ GN+V++SN+YAADA+W+GV+E+R LMK
Sbjct: 738 IWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMK 797
Query: 821 TRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIKDQV 870
+++KKPA CSW+EV+ + N F++GD SHPRRD I+ +++ L Q+K+ V
Sbjct: 798 KKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKEPV 847
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 262/530 (49%), Gaps = 59/530 (11%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
+A+ + SW II GF + + +A F L+ N+ + VL C S+ +
Sbjct: 184 IADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKE--PTEPNYATIANVLPVCASMDKNI 241
Query: 61 L---GKALHGYVTKLGHISCQA-VSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILL 116
G+ +H YV + + V +L++ Y + G I++ LF ++ + D V+WN+++
Sbjct: 242 ACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVI 301
Query: 117 SGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFG 176
+G+A S+ + + LF+N+ + P+SVT+ +L CA+L + +GK +H+Y+++
Sbjct: 302 AGYA-SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHS 360
Query: 177 -LERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLF 235
L T VGN+L S YA+ G AY F + KD++SWNA++ +++ L
Sbjct: 361 YLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLL 420
Query: 236 SWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRA------------ELI 283
+L E I + TIL++L C ++ + +G +E+H Y ++ L+
Sbjct: 421 HHLLNEAITLDSVTILSLLKFCINV-QGIGKV--KEVHGYSVKAGLLHDEEEPKLGNALL 477
Query: 284 ADVSVC----------------------NALVSFYLRFGRTEEAELLFRRMKSRDLVSWN 321
+ C N+L+S Y+ G ++A++LF M + DL +W+
Sbjct: 478 DAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWS 537
Query: 322 AIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLR 381
++ YA + +A+ +F E+ + M P++VT+++LLP CA L +L + ++ HGY +R
Sbjct: 538 LMVRIYAESCCPNEAIGVFREIQARGM-RPNTVTIMNLLPVCAQLASLHLVRQCHGYIIR 596
Query: 382 HPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLN 441
D + L+ YAKC ++ AY F RRDL+ + +M+ ++ G + L
Sbjct: 597 GGL--GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALM 654
Query: 442 LLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDT 491
+ + M I+PD + I T++ C H LI+ GL + D+
Sbjct: 655 IYSHMTESNIKPDHVFITTMLTAC-----------CHAGLIQDGLQIYDS 693
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust.
Identities = 273/858 (31%), Positives = 452/858 (52%), Gaps = 53/858 (6%)
Query: 17 CRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHGYVTK-LGHI 75
C DG+ EA +SP + F+ VL+ C + G+ LH + K
Sbjct: 59 CFDGVLTEAFQRLDVSENNSPV-----EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSF 113
Query: 76 SCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYN 135
++ L+ +Y KCG +DD K+F ++ + WN ++ + S+ + A + L++N
Sbjct: 114 ELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV-SNGEPASALALYWN 172
Query: 136 MHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRG 195
M V P S A+ L ACA+L I +G LH+ ++K G + N+L SMYAK
Sbjct: 173 MRVEGVPLGLSSFPAL-LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND 231
Query: 196 LVHDAYSVFDSIEDK-DVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNIL 254
+ A +FD ++K D V WN+++S S + + LF M PN TI++ L
Sbjct: 232 DLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSAL 291
Query: 255 PICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKS 314
C G+EIH VL+ + +++ VCNAL++ Y R G+ +AE + R+M +
Sbjct: 292 TACDGFSYAK---LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN 348
Query: 315 RDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKE 374
D+V+WN++I GY N + +AL F ++I D V++ S++ A L NL G E
Sbjct: 349 ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK-SDEVSMTSIIAASGRLSNLLAGME 407
Query: 375 IHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESG 434
+H Y ++H + + + VGN L+ Y+KC+ R FL + +DLISW +++ ++++
Sbjct: 408 LHAYVIKHGW-DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 466
Query: 435 YNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHN 494
+ + L L + + + D + + +I+ + + +VKE H ++++ GLL DT
Sbjct: 467 CHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL--DTV-- 522
Query: 495 IGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYAR 554
I N ++D Y KCRN+ YA VF+S ++ +++V++ +IS A G+ E
Sbjct: 523 IQNELVDVYGKCRNMGYATRVFES-IKGKDVVSWTSMISSSALNGNESE----------- 570
Query: 555 DLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCH 614
A+ LF ++ G+ D+V ++ +L + +++++ R+ H
Sbjct: 571 --------------------AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIH 610
Query: 615 GYVIRA--CFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMG 672
Y++R C +G + A++ +YA CG + SA +F +K ++ T+MI Y MHG G
Sbjct: 611 CYLLRKGFCLEG-SIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCG 669
Query: 673 KAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYAS 732
KAA+++F M V+PDH+ A+L ACSHAGL+DEG + +E ++P PE Y
Sbjct: 670 KAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVC 729
Query: 733 LVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADN 792
LVD+L R + +A+ V M E VW LL ACR H E E+G + A RL E+E N
Sbjct: 730 LVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKN 789
Query: 793 IGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSHPRR 852
GN V++SN++A RW+ V ++R MK ++K CSWIE++ K + F A D SHP
Sbjct: 790 PGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPES 849
Query: 853 DMIYWVLSILDEQIKDQV 870
IY LS + +++ +V
Sbjct: 850 KEIYEKLSEVTRKLEREV 867
Score = 253 bits (647), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 187/621 (30%), Positives = 302/621 (48%), Gaps = 55/621 (8%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M + A +W T+I + +G AL+L+ + V F A+LK+C L DI
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWN--MRVEGVPLGLSSFPALLKACAKLRDIR 199
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLF-GQVDNTDPVTWNILLSGF 119
G LH + KLG+ S + AL+++YAK + +LF G + D V WN +LS +
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 120 ACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLER 179
+ S + LF MH+ P PNS T+ L+AC GK +HA V+K
Sbjct: 260 STSG-KSLETLELFREMHMTG-PAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 180 HTL-VGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWM 238
L V N+L +MY + G + A + + + DVV+WN++I G +N + +A FS M
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 239 LTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLR 298
+ K + ++ +I+ L G E+H YV++ +++ V N L+ Y +
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLS---NLLAGMELHAYVIKHG-WDSNLQVGNTLIDMYSK 433
Query: 299 FGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVS 358
T F RM +DL+SW +IAGYA ND ++AL LF ++ K M D + L S
Sbjct: 434 CNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM-EIDEMILGS 492
Query: 359 LLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRR 418
+L A + LK++ + KEIH + LR L D + N LV Y KC +M A R F I +
Sbjct: 493 ILRASSVLKSMLIVKEIHCHILRKGLL--DTVIQNELVDVYGKCRNMGYATRVFESIKGK 550
Query: 419 DLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETH 478
D++SW SM+ + + +G S+ + L M+ G+ DS+ +L I+ ++ +E H
Sbjct: 551 DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIH 610
Query: 479 GYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYA-- 536
YL++ G L E +I A++D YA C +++ A VF +E++ L+ + +I+ Y
Sbjct: 611 CYLLRKGFCL---EGSIAVAVVDMYACCGDLQSAKAVFDR-IERKGLLQYTSMINAYGMH 666
Query: 537 NCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMS 596
CG A A+ LF K++ + + PD ++ ++
Sbjct: 667 GCGKA---------------------------------AVELFDKMRHENVSPDHISFLA 693
Query: 597 LLPVCSQMASVHLLRQCHGYV 617
LL CS LL + G++
Sbjct: 694 LLYACSHAG---LLDEGRGFL 711
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/731 (32%), Positives = 411/731 (56%), Gaps = 31/731 (4%)
Query: 143 KPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTL-VGNSLTSMYAKRGLVHDAY 201
KP++ +L A A L + GK +HA+V KFG ++ V N+L ++Y K G Y
Sbjct: 94 KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY 153
Query: 202 SVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLD 261
VFD I +++ VSWN++IS L + A F ML E ++P+ T+++++ C++L
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 262 EDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWN 321
G G+++H Y LR+ EL + + N LV+ Y + G+ +++L RDLV+WN
Sbjct: 214 MPEGLMMGKQVHAYGLRKGEL--NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 322 AIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLR 381
+++ N++ L+AL E++ E + PD T+ S+LPAC++L+ L+ GKE+H Y L+
Sbjct: 272 TVLSSLCQNEQLLEALEYLREMVL-EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 382 HPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLN 441
+ L+E++ VG+ALV Y C + + R F + R + WN+M+ +S++ ++ + L
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390
Query: 442 LLNCMLME-GIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAIL 500
L M G+ +S T+ ++ C + HG+++K GL D + + N ++
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL---DRDRFVQNTLM 447
Query: 501 DAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWN 560
D Y++ I A +F +E R+LVT+N +I+GY ++A + ++ +
Sbjct: 448 DMYSRLGKIDIAMRIFGK-MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 561 LMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRA 620
RV +KP+++T+M++LP C+ ++++ ++ H Y I+
Sbjct: 507 GASRV--------------------SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN 546
Query: 621 CF-DGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVF 679
V + AL+ +YAKCG + + K+F PQK+V+ +I Y MHG G+ A+ +
Sbjct: 547 NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLL 606
Query: 680 SDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLAR 739
M+ GV P+ V +V +ACSH+G+VDEGL IF ++ G++P+ + YA +VDLL R
Sbjct: 607 RMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGR 666
Query: 740 GGQISDAYSLVNRMPVEAD-CNVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVV 798
G+I +AY L+N MP + + W +LLGA RIH+ +E+G + A L ++E + +YV+
Sbjct: 667 AGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVL 726
Query: 799 MSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWV 858
++N+Y++ WD E+R+ MK + ++K CSWIE + + F+AGD SHP+ + +
Sbjct: 727 LANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGY 786
Query: 859 LSILDEQIKDQ 869
L L E+++ +
Sbjct: 787 LETLWERMRKE 797
Score = 270 bits (691), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 206/741 (27%), Positives = 363/741 (48%), Gaps = 71/741 (9%)
Query: 9 WITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHGY 68
WI ++ R L +EA+ + + ++ ++ F A+LK+ L D+ LGK +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMI--VLGIKPDNYAFPALLKAVADLQDMELGKQIHAH 122
Query: 69 VTKLGH-ISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDA 127
V K G+ + V+ L+NLY KCG YK+F ++ + V+WN L+S CS
Sbjct: 123 VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSL-CSFEKWE 181
Query: 128 RVMNLFYNMHVRDQPKPNSVTVAIVLSACARLG---GIFAGKSLHAYVIKFGLERHTLVG 184
+ F M + + +P+S T+ V++AC+ L G+ GK +HAY ++ G E ++ +
Sbjct: 182 MALEAFRCM-LDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFII 239
Query: 185 NSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIK 244
N+L +MY K G + + + S +D+V+WN V+S L +N+ L +A M+ E ++
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 245 PNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEE 304
P+ TI ++LP C+ L+ G+E+H Y L+ L + V +ALV Y +
Sbjct: 300 PDEFTISSVLPACSHLEM---LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 356
Query: 305 AELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACA 364
+F M R + WNA+IAGY+ N+ +AL LF + + +S T+ ++PAC
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416
Query: 365 YLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWN 424
+ IHG+ ++ L+ D V N L+ Y++ ++ A R F + RDL++WN
Sbjct: 417 RSGAFSRKEAIHGFVVKRG-LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475
Query: 425 SMLDAFSESGYNSQFLNLLNCM------LMEG-----IRPDSITILTIIHFCTTVLREGM 473
+M+ + S ++ L LL+ M + +G ++P+SIT++TI+ C +
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 474 VKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVIS 533
KE H Y IK L T+ +G+A++D YAKC ++ + VF + +K N++T+N +I
Sbjct: 536 GKEIHAYAIKNNLA---TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIM 591
Query: 534 GYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVT 593
Y G+ E A+ L + QG+KP+ VT
Sbjct: 592 AYGMHGNGQE-------------------------------AIDLLRMMMVQGVKPNEVT 620
Query: 594 IMSLLPVCSQMASVHLLRQCHGYVIRACFDGVRLN----GALLHLYAKCGSIFSASKIFQ 649
+S+ CS V + YV++ + GV + ++ L + G I A ++
Sbjct: 621 FISVFAACSHSGMVDEGLRIF-YVMKPDY-GVEPSSDHYACVVDLLGRAGRIKEAYQLMN 678
Query: 650 CHPQ--KDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVN-PDHVVITAVLSACSHAGL 706
P+ ++++G +H + ++++L N H V+ A + S AGL
Sbjct: 679 MMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLA--NIYSSAGL 736
Query: 707 VDEGLEIFRSIEKVQGIKPTP 727
D+ E+ R++ K QG++ P
Sbjct: 737 WDKATEVRRNM-KEQGVRKEP 756
Score = 159 bits (402), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 126/523 (24%), Positives = 226/523 (43%), Gaps = 74/523 (14%)
Query: 268 FGREIHCYVLRRAELIADVSVCNALV---SFYLRFGRTEEAELLFRRMKSRDLVSWNAII 324
F R H Y+LR A V +A+ S ++ R+ E + R K R + A++
Sbjct: 24 FSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVL 83
Query: 325 AGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPY 384
+ ++I I PD+ +LL A A L+++++GK+IH + + Y
Sbjct: 84 T--------------YVDMIVLG-IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGY 128
Query: 385 LEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLN 444
+ V N LV+ Y KC D A Y+ F I R+ +SWNS++ + L
Sbjct: 129 GVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFR 188
Query: 445 CMLMEGIRPDSITILTIIHFCTTV-LREG--MVKETHGYLIKTGLLLGDTEHNIGNAILD 501
CML E + P S T+++++ C+ + + EG M K+ H Y ++ G L
Sbjct: 189 CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-------------- 234
Query: 502 AYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNL 561
N N +++ Y G + + RDL WN
Sbjct: 235 ----------------------NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 272
Query: 562 MIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIR-- 619
++ +N+ +AL ++ +G++PD TI S+LP CS + + ++ H Y ++
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 620 ACFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVF 679
+ + + AL+ +Y C + S ++F + + + AMI GY+ + K AL +F
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 680 SDMLE-LGVNPDHVVITAVLSACSHAGLVDE-----GLEIFRSIEKVQGIKPTPEQYASL 733
M E G+ + + V+ AC +G G + R +++ + ++ T L
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT------L 446
Query: 734 VDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRI--HHE 774
+D+ +R G+I A + +M + D W T++ HHE
Sbjct: 447 MDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEHHE 488
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQ----------SSPSVRHNHQLFSAVL 50
M + + +W T+I G+ H++AL L H++Q S S++ N +L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDAL-LLLHKMQNLERKVSKGASRVSLKPNSITLMTIL 524
Query: 51 KSCTSLADILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPV 110
SC +L+ + GK +H Y K + AV AL+++YAKCG + K+F Q+ + +
Sbjct: 525 PSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVI 584
Query: 111 TWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHA 170
TWN+++ + H + ++L M V+ KPN VT V +AC+ G + G +
Sbjct: 585 TWNVIIMAYGM-HGNGQEAIDLLRMMMVQGV-KPNEVTFISVFAACSHSGMVDEGLRIF- 641
Query: 171 YVIK--FGLERHTLVGNSLTSMYAKRGLVHDAYSVFD 205
YV+K +G+E + + + + G + +AY + +
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN 678
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 273/873 (31%), Positives = 445/873 (50%), Gaps = 63/873 (7%)
Query: 13 INGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHGYVTKL 72
I + G + +AL L++ SSP + F ++LK+C++L ++ GK +HG V L
Sbjct: 31 IRALIQKGEYLQALHLYSKHDGSSP-FWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVL 89
Query: 73 GHISCQAVSKALLNLYAKCGVIDDCYKLF-------GQVDNTDPVTWNILLSG-FACSHV 124
G ++ +L+N+Y KCG +D ++F V D WN ++ G F
Sbjct: 90 GWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRF 149
Query: 125 DDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIF--AGKSLHAYVIKFGLERHTL 182
+ + F M V +P++ +++IV+S + G GK +H ++++ L+ +
Sbjct: 150 KEG--VGCFRRMLVFG-VRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSF 206
Query: 183 VGNSLTSMYAKRGLVHDAYSVFDSIEDK-DVVSWNAVISGLSENKVLGDAFRLFSWMLTE 241
+ +L MY K GL DA+ VF IEDK +VV WN +I G + + + L+
Sbjct: 207 LKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNN 266
Query: 242 PIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGR 301
+K + L C S E+ G FGR+IHC V++ L D VC +L+S Y + G
Sbjct: 267 SVKLVSTSFTGALGAC-SQSENSG--FGRQIHCDVVKMG-LHNDPYVCTSLLSMYSKCGM 322
Query: 302 TEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLP 361
EAE +F + + L WNA++A YA ND AL+LF + ++ + PDS TL +++
Sbjct: 323 VGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF-GFMRQKSVLPDSFTLSNVIS 381
Query: 362 ACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLI 421
C+ L GK +H + P ++ + + +AL++ Y+KC AY F + +D++
Sbjct: 382 CCSVLGLYNYGKSVHAELFKRP-IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMV 440
Query: 422 SWNSMLDAFSESGYNSQFLNLLNCMLME--GIRPDSITILTIIHFCTTV--LREGMVKET 477
+W S++ ++G + L + M + ++PDS + ++ + C + LR G+ +
Sbjct: 441 AWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGL--QV 498
Query: 478 HGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYAN 537
HG +IKTGL+L +G++++D Y+KC
Sbjct: 499 HGSMIKTGLVLNVF---VGSSLIDLYSKC------------------------------- 524
Query: 538 CGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSL 597
G + A F+ + ++ WN MI Y+ N+ P ++ LF + +QG+ PD+V+I S+
Sbjct: 525 -GLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSV 583
Query: 598 LPVCSQMASVHLLRQCHGYVIRACFDG-VRLNGALLHLYAKCGSIFSASKIFQCHPQKDV 656
L S AS+ + HGY +R L AL+ +Y KCG A IF+ K +
Sbjct: 584 LVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSL 643
Query: 657 VMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRS 716
+ MI GY HG AL +F +M + G +PD V +++SAC+H+G V+EG IF
Sbjct: 644 ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEF 703
Query: 717 IEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVE 776
+++ GI+P E YA++VDLL R G + +AYS + MP+EAD ++W LL A R HH VE
Sbjct: 704 MKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVE 763
Query: 777 LGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVE 836
LG + A +L ME + YV + NLY + ++ LMK + L K CSWIEV
Sbjct: 764 LGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVS 823
Query: 837 RKNNAFMAGDYSHPRRDMIYWVLSILDEQIKDQ 869
+ N F +G S P + I+ VL+ L + D+
Sbjct: 824 DRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVDE 856
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 206/402 (51%), Gaps = 9/402 (2%)
Query: 9 WITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHGY 68
W ++ + + AL LF Q SV + S V+ C+ L GK++H
Sbjct: 341 WNAMVAAYAENDYGYSALDLFGFMRQ--KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 69 VTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDAR 128
+ K S + ALL LY+KCG D Y +F ++ D V W L+SG C +
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGL-CKNGKFKE 457
Query: 129 VMNLFYNMHVRDQP-KPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSL 187
+ +F +M D KP+S + V +ACA L + G +H +IK GL + VG+SL
Sbjct: 458 ALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSL 517
Query: 188 TSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNY 247
+Y+K GL A VF S+ +++V+WN++IS S N + + LF+ ML++ I P+
Sbjct: 518 IDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDS 577
Query: 248 ATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAEL 307
+I ++L ++ G+ +H Y LR + +D + NAL+ Y++ G ++ AE
Sbjct: 578 VSITSVL---VAISSTASLLKGKSLHGYTLRLG-IPSDTHLKNALIDMYVKCGFSKYAEN 633
Query: 308 LFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLK 367
+F++M+ + L++WN +I GY S+ + + AL+LF E+ K PD VT +SL+ AC +
Sbjct: 634 IFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEM-KKAGESPDDVTFLSLISACNHSG 692
Query: 368 NLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAY 409
++ GK I + + +E + +V + +E AY
Sbjct: 693 FVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAY 734
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 212/466 (45%), Gaps = 54/466 (11%)
Query: 319 SWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGY 378
S N+ I E+L+AL+L+ + W T SLL AC+ L NL GK IHG
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 379 FLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTF-------LMICRRDLISWNSMLDAFS 431
+ + D + +LV+ Y KC ++ A + F + RD+ WNSM+D +
Sbjct: 86 VVVLGW-RYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF 144
Query: 432 ESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMV-----KETHGYLIKTGL 486
+ + + ML+ G+RPD+ ++ ++ + + +EG K+ HG++++ L
Sbjct: 145 KFRRFKEGVGCFRRMLVFGVRPDAFSLSIVV---SVMCKEGNFRREEGKQIHGFMLRNSL 201
Query: 487 LLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFM 546
DT+ + A++D Y K A+ VF + +K N+V
Sbjct: 202 ---DTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL------------------- 239
Query: 547 TFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMAS 606
WN+MI + + +L L++ + +K + + L CSQ +
Sbjct: 240 ------------WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSEN 287
Query: 607 VHLLRQCHGYVIR-ACFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGG 665
RQ H V++ + + +LL +Y+KCG + A +F C K + + AM+
Sbjct: 288 SGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAA 347
Query: 666 YAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKP 725
YA + G +AL +F M + V PD ++ V+S CS GL + G + + K + I+
Sbjct: 348 YAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK-RPIQS 406
Query: 726 TPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLL-GACR 770
T ++L+ L ++ G DAY + M E D WG+L+ G C+
Sbjct: 407 TSTIESALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCK 451
Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 135/257 (52%), Gaps = 2/257 (0%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E + +W ++I+G C++G KEAL +F S++ + + ++V +C L +
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
G +HG + K G + V +L++LY+KCG+ + K+F + + V WN ++S ++
Sbjct: 494 FGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYS 553
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
+++ + + +LF N+ + P+SV++ VL A + + GKSLH Y ++ G+
Sbjct: 554 RNNLPELSI-DLF-NLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSD 611
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT 240
T + N+L MY K G A ++F ++ K +++WN +I G + A LF M
Sbjct: 612 THLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKK 671
Query: 241 EPIKPNYATILNILPIC 257
P+ T L+++ C
Sbjct: 672 AGESPDDVTFLSLISAC 688
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 269/866 (31%), Positives = 442/866 (51%), Gaps = 84/866 (9%)
Query: 4 PNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGK 63
P++ S+ ++ C++G KEALSL ++R +++ +L+ C D+ GK
Sbjct: 33 PSSTSYFHRVSSLCKNGEIKEALSLVTE--MDFRNLRIGPEIYGEILQGCVYERDLSTGK 90
Query: 64 ALHGYVTKLG--HISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFAC 121
+H + K G + + + L+ YAKC ++ LF ++ + +W ++ G C
Sbjct: 91 QIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAII-GVKC 149
Query: 122 SHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHT 181
+ F M + ++ P++ V V AC L G+ +H YV+K GLE
Sbjct: 150 RIGLCEGALMGFVEM-LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCV 208
Query: 182 LVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTE 241
V +SL MY K G++ DA VFD I D++ V+WNA++ G +N +A RLFS M +
Sbjct: 209 FVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ 268
Query: 242 PIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGR 301
++P T+ L A++ G G++ H + + ++ + +L++FY + G
Sbjct: 269 GVEPTRVTVSTCLSASANMG---GVEEGKQSHAIAIVNGMELDNI-LGTSLLNFYCKVGL 324
Query: 302 TEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLP 361
E AE++F RM +D+V+WN II+GY A+ + C+L+ E + D VTL +L+
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM-CQLMRLEKLKYDCVTLATLMS 383
Query: 362 ACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLI 421
A A +NLK+GKE+ Y +RH + E D + + ++ YAKC + A + F +DLI
Sbjct: 384 AAARTENLKLGKEVQCYCIRHSF-ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLI 442
Query: 422 SWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYL 481
WN++L A++ESG + + L L M +EG+ P+ IT II ++LR G V E
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII---LSLLRNGQVDEA---- 495
Query: 482 IKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSA 541
K F QS NL+++ +++G G +
Sbjct: 496 ----------------------------KDMFLQMQSSGIIPNLISWTTMMNGMVQNGCS 527
Query: 542 DEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFL-KLQAQGMKPDAVTIMSLLPV 600
+EA LFL K+Q G++P+A +I L
Sbjct: 528 EEAI--------------------------------LFLRKMQESGLRPNAFSITVALSA 555
Query: 601 CSQMASVHLLRQCHGYVIRACFDG--VRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVM 658
C+ +AS+H+ R HGY+IR V + +L+ +YAKCG I A K+F ++ +
Sbjct: 556 CAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPL 615
Query: 659 LTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIE 718
AMI YA++G K A+ ++ + +G+ PD++ IT VLSAC+HAG +++ +EIF I
Sbjct: 616 SNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV 675
Query: 719 KVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELG 778
+ +KP E Y +VDLLA G+ A L+ MP + D + +L+ +C + EL
Sbjct: 676 SKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELV 735
Query: 779 RVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEV--E 836
++ +L E E +N GNYV +SN YA + WD VV++R++MK + LKK CSWI++ E
Sbjct: 736 DYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGE 795
Query: 837 RKNNAFMAGDYSHPRRDMIYWVLSIL 862
+ F+A D +H R + I +L++L
Sbjct: 796 EGVHVFVANDKTHTRINEIQMMLALL 821
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/826 (29%), Positives = 434/826 (52%), Gaps = 49/826 (5%)
Query: 49 VLKSCTSLADILLGKALHGYVTKLGHISCQAV-SKALLNLYAKCGVIDDCYKLFGQVDNT 107
+L++ DI +G+ +H V+ + V ++ +YA CG DD +F + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 108 DPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKS 167
+ WN ++S ++ + + D V+ F M P+ T V+ ACA + + G +
Sbjct: 150 NLFQWNAVISSYSRNELYD-EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 168 LHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKV 227
+H V+K GL VGN+L S Y G V DA +FD + ++++VSWN++I S+N
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 228 LGDAFRLFSWMLTE----PIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELI 283
++F L M+ E P+ AT++ +LP+CA + ++G G+ +H + + + L
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR-EREIG--LGKGVHGWAV-KLRLD 324
Query: 284 ADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCEL 343
++ + NAL+ Y + G A+++F+ ++++VSWN ++ G+++ + ++ ++
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 344 IT-KEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKC 402
+ E + D VT+++ +P C + L KE+H Y L+ ++ + V NA V+ YAKC
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE-LVANAFVASYAKC 443
Query: 403 SDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTII 462
+ A R F I + + SWN+++ ++S L+ M + G+ PDS T+ +++
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 463 HFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEK 522
C+ + + KE HG++I+ L +
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWL-----------------------------------E 528
Query: 523 RNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKL 582
R+L + V+S Y +CG F + + L WN +I Y +N FP++AL +F ++
Sbjct: 529 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 583 QAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACF-DGVRLNGALLHLYAKCGSI 641
G++ +++M + CS + S+ L R+ H Y ++ D + +L+ +YAK GSI
Sbjct: 589 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSI 648
Query: 642 FSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSAC 701
+SK+F +K AMI GY +HG+ K A+K+F +M G NPD + VL+AC
Sbjct: 649 TQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTAC 708
Query: 702 SHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLV-NRMPVEADCN 760
+H+GL+ EGL ++ G+KP + YA ++D+L R GQ+ A +V M EAD
Sbjct: 709 NHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 768
Query: 761 VWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMK 820
+W +LL +CRIH +E+G VA +LFE+E + NYV++SNLYA +W+ V ++R+ M
Sbjct: 769 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMN 828
Query: 821 TRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQI 866
L+K A CSWIE+ RK +F+ G+ + I + SIL+ +I
Sbjct: 829 EMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKI 874
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 23/265 (8%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQL----FSAVLKSCTSL 56
M + + SW T+I G+ ++G AL +F V + QL V +C+ L
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQ------MVLYGIQLCGISMMPVFGACSLL 610
Query: 57 ADILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILL 116
+ LG+ H Y K ++ +L+++YAK G I K+F + +WN ++
Sbjct: 611 PSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 670
Query: 117 SGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAG-KSLHAYVIKF 175
G+ H + LF M R P+ +T VL+AC G I G + L F
Sbjct: 671 MGYGI-HGLAKEAIKLFEEMQ-RTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSF 728
Query: 176 GLERHTLVGNSLTSMYAKRGLVHDAYSVF--DSIEDKDVVSWNAVISG--LSENKVLGD- 230
GL+ + + M + G + A V + E+ DV W +++S + +N +G+
Sbjct: 729 GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEK 788
Query: 231 -AFRLFSWMLTEPIKP-NYATILNI 253
A +LF EP KP NY + N+
Sbjct: 789 VAAKLFE---LEPEKPENYVLLSNL 810
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust.
Identities = 253/828 (30%), Positives = 434/828 (52%), Gaps = 51/828 (6%)
Query: 46 FSAVLKSCTSLADILLGKALHGYVTKLGHISCQAVS-KALLNLYAKCGVIDDCYKLFGQV 104
S +L++C++ + GK +H ++ + IS + + + +L +YA CG DC K+F ++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLI-VNSISGDSYTDERILGMYAMCGSFSDCGKMFYRL 96
Query: 105 D--NTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGI 162
D + WN ++S F + + + + FY + P+ T ++ AC L
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALA--FYFKMLCFGVSPDVSTFPCLVKACVALKNF 154
Query: 163 FAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGL 222
L V G++ + V +SL Y + G + +FD + KD V WN +++G
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 223 SENKVLGDAFRLFSWMLTEPIKPNYATILNILPICAS-LDEDVGYFFGREIHCYVLRRAE 281
++ L + FS M + I PN T +L +CAS L D+G ++H V+
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV----QLHGLVVVSG- 269
Query: 282 LIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFC 341
+ + S+ N+L+S Y + GR ++A LFR M D V+WN +I+GY + ++L F
Sbjct: 270 VDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFY 329
Query: 342 ELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAK 401
E+I+ ++ PD++T SLLP+ + +NL+ K+IH Y +RH + D + +AL+ Y K
Sbjct: 330 EMISSGVL-PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS-ISLDIFLTSALIDAYFK 387
Query: 402 CSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTI 461
C + A F D++ + +M+ + +G L + ++ I P+ IT+++I
Sbjct: 388 CRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSI 447
Query: 462 IHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLE 521
+ +L + +E HG++IK G D NIG A++D YAK
Sbjct: 448 LPVIGILLALKLGRELHGFIIKKGF---DNRCNIGCAVIDMYAK---------------- 488
Query: 522 KRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLK 581
CG + A+ F R+ RD+ WN MI A++D P+ A+ +F +
Sbjct: 489 ----------------CGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQ 532
Query: 582 LQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACF-DGVRLNGALLHLYAKCGS 640
+ G+ D V+I + L C+ + S + HG++I+ V L+ +YAKCG+
Sbjct: 533 MGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGN 592
Query: 641 IFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLEL-GVNPDHVVITAVLS 699
+ +A +F+ +K++V ++I HG K +L +F +M+E G+ PD + ++S
Sbjct: 593 LKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIIS 652
Query: 700 ACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADC 759
+C H G VDEG+ FRS+ + GI+P E YA +VDL R G++++AY V MP D
Sbjct: 653 SCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDA 712
Query: 760 NVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLM 819
VWGTLLGACR+H VEL V +++L +++ N G YV++SN +A W+ V ++R LM
Sbjct: 713 GVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLM 772
Query: 820 KTRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIK 867
K R+++K SWIE+ ++ + F++GD +HP IY +L+ L +++
Sbjct: 773 KEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
Score = 272 bits (695), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 181/604 (29%), Positives = 312/604 (51%), Gaps = 50/604 (8%)
Query: 7 KSWITIINGFCRDGLHKEALSLFAHEL--QSSPSVRHNHQLFSAVLKSCTSLADILLGKA 64
+ W +II+ F R+GL +AL+ + L SP V F ++K+C +L +
Sbjct: 104 RPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDV----STFPCLVKACVALKNFKGIDF 159
Query: 65 LHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA-CSH 123
L V+ LG + V+ +L+ Y + G ID KLF +V D V WN++L+G+A C
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 124 VDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLV 183
+D V+ F M + DQ PN+VT VLS CA I G LH V+ G++ +
Sbjct: 220 LDS--VIKGFSVMRM-DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 184 GNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPI 243
NSL SMY+K G DA +F + D V+WN +ISG ++ ++ ++ F M++ +
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 244 KPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTE 303
P+ T ++LP + E++ Y ++IHCY++R + + D+ + +AL+ Y +
Sbjct: 337 LPDAITFSSLLPSVSKF-ENLEY--CKQIHCYIMRHS-ISLDIFLTSALIDAYFKCRGVS 392
Query: 304 EAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPAC 363
A+ +F + S D+V + A+I+GY N ++ +L +F + K I P+ +TLVS+LP
Sbjct: 393 MAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMF-RWLVKVKISPNEITLVSILPVI 451
Query: 364 AYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISW 423
L LK+G+E+HG+ ++ + + +G A++ YAKC M AY F + +RD++SW
Sbjct: 452 GILLALKLGRELHGFIIKKGF-DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSW 510
Query: 424 NSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIK 483
NSM+ ++S S +++ M + GI D ++I + C + E K HG++IK
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK 570
Query: 484 TGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADE 543
L ++ + ++D YAKC N+K A NVF+++ EK N+V++N +I+ N G +
Sbjct: 571 HSLA---SDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNHGKLKD 626
Query: 544 AFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQ 603
+ F + ++ G++PD +T + ++ C
Sbjct: 627 SLCLFHEM------------------------------VEKSGIRPDQITFLEIISSCCH 656
Query: 604 MASV 607
+ V
Sbjct: 657 VGDV 660
Score = 160 bits (404), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 222/436 (50%), Gaps = 21/436 (4%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M+ + +W +I+G+ + GL +E+L+ F +E+ SS V + FS++L S + ++
Sbjct: 300 MSRADTVTWNCMISGYVQSGLMEESLTFF-YEMISS-GVLPDAITFSSLLPSVSKFENLE 357
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
K +H Y+ + ++ AL++ Y KC + +F Q ++ D V + ++SG+
Sbjct: 358 YCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYL 417
Query: 121 CS--HVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLE 178
+ ++D + + V+ + PN +T+ +L L + G+ LH ++IK G +
Sbjct: 418 HNGLYIDSLEM----FRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD 473
Query: 179 RHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWM 238
+G ++ MYAK G ++ AY +F+ + +D+VSWN++I+ +++ A +F M
Sbjct: 474 NRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Query: 239 LTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLR 298
I + +I L CA+L + FG+ IH ++++ + L +DV + L+ Y +
Sbjct: 534 GVSGICYDCVSISAALSACANLPSES---FGKAIHGFMIKHS-LASDVYSESTLIDMYAK 589
Query: 299 FGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVS 358
G + A +F+ MK +++VSWN+IIA ++ + +L LF E++ K I PD +T +
Sbjct: 590 CGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLE 649
Query: 359 LLPACAYLKNLKVG----KEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFL- 413
++ +C ++ ++ G + + + P E A V V + + + AY T
Sbjct: 650 IISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV----VDLFGRAGRLTEAYETVKS 705
Query: 414 MICRRDLISWNSMLDA 429
M D W ++L A
Sbjct: 706 MPFPPDAGVWGTLLGA 721
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 234/712 (32%), Positives = 384/712 (53%), Gaps = 47/712 (6%)
Query: 148 TVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSI 207
T+ VL CA + GK + ++ G + +G+ L+ MY G + +A VFD +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 208 EDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYF 267
+ + + WN +++ L+++ + LF M++ ++ + T + +SL G
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG-- 213
Query: 268 FGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGY 327
G ++H ++L+ SV N+LV+FYL+ R + A +F M RD++SWN+II GY
Sbjct: 214 -GEQLHGFILKSG-FGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 328 ASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEE 387
SN K L++F +++ I D T+VS+ CA + + +G+ +H ++ + E
Sbjct: 272 VSNGLAEKGLSVFVQMLVSG-IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 388 DAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCML 447
D N L+ Y+KC D+++A F + R ++S+ SM+ ++ G + + L M
Sbjct: 331 DRFC-NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 448 MEGIRPDSITILTIIHFCTT--VLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAK 505
EGI PD T+ +++ C +L EG K H ++ E+++G
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEG--KRVHEWI---------KENDLG--------- 429
Query: 506 CRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRV 565
F++F S N ++ YA CGS EA + FS + +D+ WN +I
Sbjct: 430 -------FDIFVS----------NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 566 YAENDFPNQALSLF-LKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIR-ACFD 623
Y++N + N+ALSLF L L+ + PD T+ +LP C+ +++ R+ HGY++R F
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 624 GVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDML 683
+ +L+ +YAKCG++ A +F KD+V T MI GY MHG GK A+ +F+ M
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 684 ELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQI 743
+ G+ D + ++L ACSH+GLVDEG F + I+PT E YA +VD+LAR G +
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 652
Query: 744 SDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLY 803
AY + MP+ D +WG LL CRIHH+V+L VA ++FE+E +N G YV+M+N+Y
Sbjct: 653 IKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIY 712
Query: 804 AADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMI 855
A +W+ V +RK + R L+K CSWIE++ + N F+AGD S+P + I
Sbjct: 713 AEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENI 764
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/471 (31%), Positives = 251/471 (53%), Gaps = 18/471 (3%)
Query: 9 WITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHGY 68
W ++N + G ++ LF + S V + FS V KS +SL + G+ LHG+
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMM--SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 220
Query: 69 VTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDAR 128
+ K G +V +L+ Y K +D K+F ++ D ++WN +++G+ + + + +
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAE-K 279
Query: 129 VMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLT 188
+++F M V + + T+ V + CA I G+++H+ +K R N+L
Sbjct: 280 GLSVFVQMLV-SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 338
Query: 189 SMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYA 248
MY+K G + A +VF + D+ VVS+ ++I+G + + G+A +LF M E I P+
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398
Query: 249 TILNILPICAS---LDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEA 305
T+ +L CA LDE G+ +H ++ + +L D+ V NAL+ Y + G +EA
Sbjct: 399 TVTAVLNCCARYRLLDE------GKRVHEWI-KENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 306 ELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAY 365
EL+F M+ +D++SWN II GY+ N +AL+LF L+ ++ PD T+ +LPACA
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 366 LKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNS 425
L G+EIHGY +R+ Y D V N+LV YAKC + A+ F I +DL+SW
Sbjct: 512 LSAFDKGREIHGYIMRNGYF-SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 570
Query: 426 MLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKE 476
M+ + G+ + + L N M GI D I+ +++++ C+ G+V E
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS---HSGLVDE 618
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 182/679 (26%), Positives = 322/679 (47%), Gaps = 51/679 (7%)
Query: 11 TIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHGYVT 70
T + FC G + A+ L L S + + +VL+ C + GK + ++
Sbjct: 66 TQLRRFCESGNLENAVKL----LCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIR 121
Query: 71 KLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVM 130
G + + L +Y CG + + ++F +V + WNIL++ A S D + +
Sbjct: 122 GNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG-DFSGSI 180
Query: 131 NLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSM 190
LF M + + +S T + V + + L + G+ LH +++K G VGNSL +
Sbjct: 181 GLFKKM-MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAF 239
Query: 191 YAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATI 250
Y K V A VFD + ++DV+SWN++I+G N + +F ML I+ + ATI
Sbjct: 240 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATI 299
Query: 251 LNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFR 310
+++ CA + GR +H + +A + CN L+ Y + G + A+ +FR
Sbjct: 300 VSVFAGCA---DSRLISLGRAVHSIGV-KACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 311 RMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLK 370
M R +VS+ ++IAGYA +A+ LF E + +E I PD T+ ++L CA + L
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLF-EEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 371 VGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAF 430
GK +H + ++ L D V NAL+ YAKC M+ A F + +D+ISWN+++ +
Sbjct: 415 EGKRVHEW-IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 473
Query: 431 SESGYNSQFLNLLNCMLMEG-IRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLG 489
S++ Y ++ L+L N +L E PD T+ ++ C ++ +E HGY+++ G
Sbjct: 474 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF-- 531
Query: 490 DTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFS 549
++ ++ N+++D YAKC + A +F + K +LV++ +I+GY G
Sbjct: 532 -SDRHVANSLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMHG---------- 579
Query: 550 RIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHL 609
F +A++LF +++ G++ D ++ +SLL CS V
Sbjct: 580 ---------------------FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDE 618
Query: 610 LRQCHGYVIRACF--DGVRLNGALLHLYAKCGSIFSASKIFQCHP-QKDVVMLTAMIGGY 666
+ + C V ++ + A+ G + A + + P D + A++ G
Sbjct: 619 GWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGC 678
Query: 667 AMHGMGKAALKVFSDMLEL 685
+H K A KV + EL
Sbjct: 679 RIHHDVKLAEKVAEKVFEL 697
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 203/411 (49%), Gaps = 10/411 (2%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E + SW +IING+ +GL ++ LS+F L S + + +V C I
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI--DLATIVSVFAGCADSRLIS 313
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
LG+A+H K LL++Y+KCG +D +F ++ + V++ +++G+A
Sbjct: 314 LGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA 373
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
+ + LF M + P+ TV VL+ CAR + GK +H ++ + L
Sbjct: 374 REGL-AGEAVKLFEEME-EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD 431
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT 240
V N+L MYAK G + +A VF + KD++SWN +I G S+N +A LF+ +L
Sbjct: 432 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Query: 241 EP-IKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRF 299
E P+ T+ +LP CASL + GREIH Y++R +D V N+LV Y +
Sbjct: 492 EKRFSPDERTVACVLPACASLS---AFDKGREIHGYIMRNG-YFSDRHVANSLVDMYAKC 547
Query: 300 GRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSL 359
G A +LF + S+DLVSW +IAGY + +A+ LF ++ + I D ++ VSL
Sbjct: 548 GALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIEADEISFVSL 606
Query: 360 LPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYR 410
L AC++ + G +E +V A+ D+ AYR
Sbjct: 607 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 657
Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 87/221 (39%), Gaps = 15/221 (6%)
Query: 552 YARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLR 611
+ R +T N +R + E+ A+ L + P T+ S+L +C+ S+ +
Sbjct: 57 FDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGK 114
Query: 612 QC------HGYVIRACFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGG 665
+ +G+VI + L L +Y CG + AS++F + + ++
Sbjct: 115 EVDNFIRGNGFVIDS-----NLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNE 169
Query: 666 YAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKP 725
A G ++ +F M+ GV D + V + S V G ++ I K G
Sbjct: 170 LAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK-SGFGE 228
Query: 726 TPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLL 766
SLV + ++ A + + M E D W +++
Sbjct: 229 RNSVGNSLVAFYLKNQRVDSARKVFDEM-TERDVISWNSII 268
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/784 (30%), Positives = 413/784 (52%), Gaps = 57/784 (7%)
Query: 99 KLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPN--SVTVAIVLSAC 156
+LF + V WN ++ GF C+++ + LFY+ + P N + T + L AC
Sbjct: 60 QLFDAIPKPTTVLWNTIIIGFICNNLPHEAL--LFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 157 ARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYS------VFDSIEDK 210
A + AGK++H ++I+ +V NSL +MY D + VFD++ K
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 211 DVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILP---ICASLDEDVGYF 267
+VV+WN +IS + +A R F M+ +KP+ + +N+ P I S+ + F
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK-ANVF 236
Query: 268 FGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGY 327
+G + E + D+ V ++ +S Y G E + +F R++ WN +I Y
Sbjct: 237 YGLMLKL----GDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 328 ASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEE 387
ND ++++ LF E I + I D VT + A + L+ +++G++ HG F+ + E
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHG-FVSKNFREL 351
Query: 388 DAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCML 447
+ N+L+ Y++C + ++ FL + RD++SWN+M+ AF ++G + + L L+ M
Sbjct: 352 PIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 411
Query: 448 MEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCR 507
+G + D IT+ ++ + + + + K+TH +LI+ G+ + + ++D Y+K
Sbjct: 412 KQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF----EGMNSYLIDMYSKSG 467
Query: 508 NIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYA 567
I+ + +F+ SGYA RD WN MI Y
Sbjct: 468 LIRISQKLFEG--------------SGYAE----------------RDQATWNSMISGYT 497
Query: 568 ENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFD-GVR 626
+N + +F K+ Q ++P+AVT+ S+LP CSQ+ SV L +Q HG+ IR D V
Sbjct: 498 QNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVF 557
Query: 627 LNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELG 686
+ AL+ +Y+K G+I A +F +++ V T MI GY HGMG+ A+ +F M E G
Sbjct: 558 VASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESG 617
Query: 687 VNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDA 746
+ PD + AVLSACS++GL+DEGL+IF + +V I+P+ E Y + D+L R G++++A
Sbjct: 618 IKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEA 677
Query: 747 YSLVNRMPVEAD-CNVWGTLLGACRIHHEVELGRVVANRL--FEMEADNIGNYVVMSNLY 803
Y V + E + +WG+LLG+C++H E+EL V+ RL F+ + G V++SN+Y
Sbjct: 678 YEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMY 737
Query: 804 AADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSILD 863
A + +W V ++R+ M+ + LKK S IE+ N F++ D HP IY V+ L
Sbjct: 738 AEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLA 797
Query: 864 EQIK 867
+ ++
Sbjct: 798 KDMR 801
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 163/615 (26%), Positives = 298/615 (48%), Gaps = 59/615 (9%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
+ +P W TII GF + L EAL ++ +++P + +S+ LK+C ++
Sbjct: 65 IPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLK 124
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCY------KLFGQVDNTDPVTWNI 114
GKA+H ++ + S + V +L+N+Y C DC+ K+F + + V WN
Sbjct: 125 AGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNT 184
Query: 115 LLSGFACS--HVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYV 172
L+S + + + + R + M V KP+ V+ V A + I + +
Sbjct: 185 LISWYVKTGRNAEACRQFGIMMRMEV----KPSPVSFVNVFPAVSISRSIKKANVFYGLM 240
Query: 173 IKFGLE--RHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGD 230
+K G E + V +S SMYA+ G + + VFDS ++++ WN +I +N L +
Sbjct: 241 LKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVE 300
Query: 231 AFRLF-SWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVC 289
+ LF + ++ I + T L ++L + GR+ H +V + + V +
Sbjct: 301 SIELFLEAIGSKEIVSDEVTYLLAASAVSALQQ---VELGRQFHGFVSKNFRELPIV-IV 356
Query: 290 NALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMI 349
N+L+ Y R G ++ +F M+ RD+VSWN +I+ + N + L L E+ K+
Sbjct: 357 NSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEM-QKQGF 415
Query: 350 WPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAY 409
D +T+ +LL A + L+N ++GK+ H + +R E + + L+ Y+K + +
Sbjct: 416 KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE--GMNSYLIDMYSKSGLIRISQ 473
Query: 410 RTF--LMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTT 467
+ F RD +WNSM+ ++++G+ + + ML + IRP+++T+ +I+ C+
Sbjct: 474 KLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQ 533
Query: 468 VLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVT 527
+ + K+ HG+ I+ L D + +A++D Y+K IKYA ++F S ++RN VT
Sbjct: 534 IGSVDLGKQLHGFSIRQYL---DQNVFVASALVDMYSKAGAIKYAEDMF-SQTKERNSVT 589
Query: 528 FNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGM 587
+ +I GY G + +A+SLFL +Q G+
Sbjct: 590 YTTMILGYGQHGMGE-------------------------------RAISLFLSMQESGI 618
Query: 588 KPDAVTIMSLLPVCS 602
KPDA+T +++L CS
Sbjct: 619 KPDAITFVAVLSACS 633
Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 141/581 (24%), Positives = 267/581 (45%), Gaps = 55/581 (9%)
Query: 200 AYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWM-LTEPIKPNYA-TILNILPIC 257
A +FD+I V WN +I G N + +A +S M T P A T + L C
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 258 ASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEE------AELLFRR 311
A E G+ +HC+++R + + V V N+L++ Y+ + +F
Sbjct: 118 A---ETKNLKAGKAVHCHLIRCLQNSSRV-VHNSLMNMYVSCLNAPDCFEYDVVRKVFDN 173
Query: 312 MKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKV 371
M+ +++V+WN +I+ Y +A F ++ E + P V+ V++ PA + +++K
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRME-VKPSPVSFVNVFPAVSISRSIKK 232
Query: 372 GKEIHGYFLR--HPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDA 429
+G L+ Y+++ V +A +S YA+ D+E++ R F R++ WN+M+
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSA-ISMYAELGDIESSRRVFDSCVERNIEVWNTMIGV 291
Query: 430 FSESGYNSQFLNL-LNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLL 488
+ ++ + + L L + + I D +T L + + + + ++ HG++ K
Sbjct: 292 YVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN---F 348
Query: 489 GDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTF 548
+ I N+++ Y++C ++ +F VF S+ E R++V++N +IS + G DE M
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRE-RDVVSWNTMISAFVQNGLDDEGLM-- 405
Query: 549 SRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVH 608
L ++Q QG K D +T+ +LL S + +
Sbjct: 406 -----------------------------LVYEMQKQGFKIDYITVTALLSAASNLRNKE 436
Query: 609 LLRQCHGYVIRACFDGVRLNGALLHLYAKCGSIFSASKIFQ--CHPQKDVVMLTAMIGGY 666
+ +Q H ++IR +N L+ +Y+K G I + K+F+ + ++D +MI GY
Sbjct: 437 IGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGY 496
Query: 667 AMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPT 726
+G + VF MLE + P+ V + ++L ACS G VD G ++ Q +
Sbjct: 497 TQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL-HGFSIRQYLDQN 555
Query: 727 PEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLG 767
++LVD+ ++ G I A + ++ +LG
Sbjct: 556 VFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG 596
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/626 (33%), Positives = 358/626 (57%), Gaps = 23/626 (3%)
Query: 257 CASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRD 316
C SL++ GR++ + +R ++ N++V+ + G +EA+ LFR M RD
Sbjct: 68 CGSLED------GRQVFDKMPQR-----NIYTWNSVVTGLTKLGFLDEADSLFRSMPERD 116
Query: 317 LVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIH 376
+WN++++G+A +D +AL F ++ KE + + S+L AC+ L ++ G ++H
Sbjct: 117 QCTWNSMVSGFAQHDRCEEALCYFA-MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVH 175
Query: 377 GYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYN 436
+ P+L D +G+ALV Y+KC ++ A R F + R+++SWNS++ F ++G
Sbjct: 176 SLIAKSPFLS-DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPA 234
Query: 437 SQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIG 496
+ L++ ML + PD +T+ ++I C ++ + +E HG ++K L D +
Sbjct: 235 VEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI--ILS 292
Query: 497 NAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDL 556
NA +D YAKC IK A +F S+ RN++ +ISGYA S A + F+++ R++
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSM-PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV 351
Query: 557 TPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGY 616
WN +I Y +N +ALSLF L+ + + P + ++L C+ +A +HL Q H +
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 411
Query: 617 VIRACF-------DGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMH 669
V++ F D + + +L+ +Y KCG + +F+ ++D V AMI G+A +
Sbjct: 412 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 471
Query: 670 GMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQ 729
G G AL++F +MLE G PDH+ + VLSAC HAG V+EG F S+ + G+ P +
Sbjct: 472 GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH 531
Query: 730 YASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEME 789
Y +VDLL R G + +A S++ MP++ D +WG+LL AC++H + LG+ VA +L E+E
Sbjct: 532 YTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVE 591
Query: 790 ADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSH 849
N G YV++SN+YA +W+ V+ +RK M+ + K CSWI+++ ++ FM D SH
Sbjct: 592 PSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSH 651
Query: 850 PRRDMIYWVLSILDEQIKDQVTISEI 875
PR+ I+ +L IL +++ + +EI
Sbjct: 652 PRKKQIHSLLDILIAEMRPEQDHTEI 677
Score = 232 bits (592), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 152/505 (30%), Positives = 252/505 (49%), Gaps = 79/505 (15%)
Query: 46 FSAVLKSC--TSLADILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQ 103
F+ +L SC + L+ I + + +H V K G + + L++ Y+KCG ++D ++F +
Sbjct: 22 FAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDK 80
Query: 104 VDNTDPVTWNILLSGFA-CSHVDDARVMNLFYNMHVRDQPKPNSV--------------- 147
+ + TWN +++G +D+A +LF +M RDQ NS+
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEAD--SLFRSMPERDQCTWNSMVSGFAQHDRCEEALC 138
Query: 148 ---------------TVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYA 192
+ A VLSAC+ L + G +H+ + K +G++L MY+
Sbjct: 139 YFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS 198
Query: 193 KRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILN 252
K G V+DA VFD + D++VVSWN++I+ +N +A +F ML ++P+ T+ +
Sbjct: 199 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 258
Query: 253 ILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEE-------- 304
++ CASL G+E+H V++ +L D+ + NA V Y + R +E
Sbjct: 259 VISACASLS---AIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 305 -----------------------AELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFC 341
A L+F +M R++VSWNA+IAGY N E +AL+LFC
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 342 ELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYL-----EEDAAVGNALV 396
L+ +E + P + ++L ACA L L +G + H + L+H + E+D VGN+L+
Sbjct: 376 -LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 434
Query: 397 SFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSI 456
Y KC +E Y F + RD +SWN+M+ F+++GY ++ L L ML G +PD I
Sbjct: 435 DMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHI 494
Query: 457 TILTIIHFCTTVLREGMVKETHGYL 481
T++ ++ C G V+E Y
Sbjct: 495 TMIGVLSACG---HAGFVEEGRHYF 516
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 158/680 (23%), Positives = 298/680 (43%), Gaps = 139/680 (20%)
Query: 145 NSVTVAIVLSAC--ARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYS 202
+S A +L +C ++L I+ + +HA VIK G + N L Y+K G + D
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 203 VFD-------------------------------SIEDKDVVSWNAVISGLSENKVLGDA 231
VFD S+ ++D +WN+++SG +++ +A
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 232 FRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNA 291
F+ M E N + ++L C+ L++ G ++H ++ ++ ++DV + +A
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLND---MNKGVQVHS-LIAKSPFLSDVYIGSA 192
Query: 292 LVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWP 351
LV Y + G +A+ +F M R++VSWN++I + N ++AL++F +++ + + P
Sbjct: 193 LVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVF-QMMLESRVEP 251
Query: 352 DSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDM------ 405
D VTL S++ ACA L +KVG+E+HG +++ L D + NA V YAKCS +
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 406 -------------------------EAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFL 440
+AA F + R+++SWN+++ ++++G N + L
Sbjct: 312 FDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEAL 371
Query: 441 NLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHN---IGN 497
+L + E + P + I+ C + + + H +++K G E + +GN
Sbjct: 372 SLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGN 431
Query: 498 AILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLT 557
+++D Y KC ++ + VF+ ++E R+ V++N +I G+
Sbjct: 432 SLIDMYVKCGCVEEGYLVFRKMME-RDCVSWNAMIIGF---------------------- 468
Query: 558 PWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYV 617
A+N + N+AL LF ++ G KPD +T++ +L C V R
Sbjct: 469 ---------AQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR------ 513
Query: 618 IRACFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALK 677
H ++ S ++ F P +D T M+ G + A
Sbjct: 514 ---------------HYFS------SMTRDFGVAPLRD--HYTCMVDLLGRAGFLEEAKS 550
Query: 678 VFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLL 737
+ E+ + PD V+ ++L+AC + G + + +V+ P Y L ++
Sbjct: 551 MIE---EMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP--YVLLSNMY 605
Query: 738 ARGGQISDAYSLVNRMPVEA 757
A G+ D ++ M E
Sbjct: 606 AELGKWEDVMNVRKSMRKEG 625
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 210/410 (51%), Gaps = 45/410 (10%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E + +W ++++GF + +EAL FA + N F++VL +C+ L D+
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALCYFA--MMHKEGFVLNEYSFASVLSACSGLNDMN 169
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
G +H + K +S + AL+++Y+KCG ++D ++F ++ + + V+WN L++ F
Sbjct: 170 KGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFE 229
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
+ +++F M + + +P+ VT+A V+SACA L I G+ +H V+K R+
Sbjct: 230 -QNGPAVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRN 287
Query: 181 TLV-GNSLTSMYAKRGLVHDAYSVFDSIE------------------------------- 208
++ N+ MYAK + +A +FDS+
Sbjct: 288 DIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMA 347
Query: 209 DKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFF 268
+++VVSWNA+I+G ++N +A LF + E + P + + NIL CA L E
Sbjct: 348 ERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE---LHL 404
Query: 269 GREIHCYVLRRAELIA-----DVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAI 323
G + H +VL+ D+ V N+L+ Y++ G EE L+FR+M RD VSWNA+
Sbjct: 405 GMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAM 464
Query: 324 IAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGK 373
I G+A N +AL LF E++ PD +T++ +L AC + ++ G+
Sbjct: 465 IIGFAQNGYGNEALELFREMLESGEK-PDHITMIGVLSACGHAGFVEEGR 513
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 179/418 (42%), Gaps = 90/418 (21%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M + N SW ++I F ++G EAL +F L+S V + ++V+ +C SL+ I
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESR--VEPDEVTLASVISACASLSAIK 270
Query: 61 LGKALHGYVTKLGHISCQAV-SKALLNLYAKCGVIDDCY--------------------- 98
+G+ +HG V K + + S A +++YAKC I +
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330
Query: 99 ----------KLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVT 148
+F ++ + V+WN L++G+ + ++ ++LF + R+ P +
Sbjct: 331 AMAASTKAARLMFTKMAERNVVSWNALIAGYT-QNGENEEALSLFCLLK-RESVCPTHYS 388
Query: 149 VAIVLSACARLGGIFAGKSLHAYVIKFGL------ERHTLVGNSLTSMYAKRGLVHDAYS 202
A +L ACA L + G H +V+K G E VGNSL MY K G V + Y
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 203 VFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPIC--ASL 260
VF + ++D VSWNA+I G ++N +A LF ML KP++ T++ +L C A
Sbjct: 449 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGF 508
Query: 261 DEDVGYFFG---REIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDL 317
E+ ++F R+ LR D C +V R G EEA+ + M
Sbjct: 509 VEEGRHYFSSMTRDFGVAPLR------DHYTC--MVDLLGRAGFLEEAKSMIEEMP---- 556
Query: 318 VSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEI 375
+ PDSV SLL AC +N+ +GK +
Sbjct: 557 -------------------------------MQPDSVIWGSLLAACKVHRNITLGKYV 583
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/509 (22%), Positives = 207/509 (40%), Gaps = 123/509 (24%)
Query: 336 ALNLFCELITKEMIWPDSVTLVSLLPAC--AYLKNLKVGKEIHGYFLRHPYLEEDAAVGN 393
A F +L + DS LL +C + L + V + +H ++ + E + N
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNE-IFIQN 59
Query: 394 ALVSFYAKCSDMEAAYRTFLMICR-------------------------------RDLIS 422
L+ Y+KC +E + F + + RD +
Sbjct: 60 RLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCT 119
Query: 423 WNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLI 482
WNSM+ F++ + L M EG + + +++ C+ + + H +
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 483 KTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSAD 542
K+ L ++ IG+A++D Y+KC N+ A VF + + RN+V++N +I+ + G A
Sbjct: 180 KSPFL---SDVYIGSALVDMYSKCGNVNDAQRVFDEMGD-RNVVSWNSLITCFEQNGPAV 235
Query: 543 EAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCS 602
E AL +F + ++PD VT+ S++ C+
Sbjct: 236 E-------------------------------ALDVFQMMLESRVEPDEVTLASVISACA 264
Query: 603 QMASVHLLRQCHGYVIRACFDGVR----LNGALLHLYAKCGSIFSASKIFQCHPQKDVVM 658
++++ + ++ HG V++ D +R L+ A + +YAKC I A IF P ++V+
Sbjct: 265 SLSAIKVGQEVHGRVVKN--DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Query: 659 LTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIE 718
T+MI GYAM KAA +F+ M E V V A+++ + G +E L +F +
Sbjct: 323 ETSMISGYAMAASTKAARLMFTKMAERNV----VSWNALIAGYTQNGENEEALSLF-CLL 377
Query: 719 KVQGIKPTPEQYA-----------------------------------------SLVDLL 737
K + + PT +A SL+D+
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 738 ARGGQISDAYSLVNRMPVEADCNVWGTLL 766
+ G + + Y LV R +E DC W ++
Sbjct: 438 VKCGCVEEGY-LVFRKMMERDCVSWNAMI 465
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 255/779 (32%), Positives = 404/779 (51%), Gaps = 56/779 (7%)
Query: 96 DCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMN---LFYNMHVRDQPKPNSVTVAIV 152
+ + LF + D ++ LL GF+ D R LF N+H R + + + V
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFS----RDGRTQEAKRLFLNIH-RLGMEMDCSIFSSV 99
Query: 153 LSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDV 212
L A L G+ LH IKFG VG SL Y K D VFD +++++V
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
Query: 213 VSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREI 272
V+W +ISG + N + + LF M E +PN T L + A +E VG G ++
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLA--EEGVGGR-GLQV 216
Query: 273 HCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDE 332
H V++ L + V N+L++ YL+ G +A +LF + + + +V+WN++I+GYA+N
Sbjct: 217 HTVVVKNG-LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 333 WLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVG 392
L+AL +F + + +S + S++ CA LK L+ +++H +++ +L D +
Sbjct: 276 DLEALGMFYSMRLNYVRLSES-SFASVIKLCANLKELRFTEQLHCSVVKYGFLF-DQNIR 333
Query: 393 NALVSFYAKCSDMEAAYRTFLMI-CRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGI 451
AL+ Y+KC+ M A R F I C +++SW +M+ F ++ + ++L + M +G+
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 452 RPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKY 511
RP+ T I+ T L E H ++KT T +G A+LDAY K
Sbjct: 394 RPNEFTYSVIL----TALPVISPSEVHAQVVKTNYERSST---VGTALLDAYVKL----- 441
Query: 512 AFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDF 571
G +EA FS I +D+ W+ M+ YA+
Sbjct: 442 ---------------------------GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 572 PNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQM-ASVHLLRQCHGYVIRACFDG-VRLNG 629
A+ +F +L G+KP+ T S+L VC+ AS+ +Q HG+ I++ D + ++
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 630 ALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNP 689
ALL +YAK G+I SA ++F+ +KD+V +MI GYA HG AL VF +M + V
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 594
Query: 690 DHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSL 749
D V V +AC+HAGLV+EG + F + + I PT E + +VDL +R GQ+ A +
Sbjct: 595 DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 654
Query: 750 VNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARW 809
+ MP A +W T+L ACR+H + ELGR+ A ++ M+ ++ YV++SN+YA W
Sbjct: 655 IENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDW 714
Query: 810 DGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIKD 868
++RKLM R++KK SWIEV+ K +F+AGD SHP +D IY L L ++KD
Sbjct: 715 QERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKD 773
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 189/654 (28%), Positives = 327/654 (50%), Gaps = 57/654 (8%)
Query: 5 NAKSWITIINGFCRDGLHKEALSLF--AHELQSSPSVRHNHQLFSAVLKSCTSLADILLG 62
+ +S+I+++ GF RDG +EA LF H L + + +FS+VLK +L D L G
Sbjct: 57 DRESYISLLFGFSRDGRTQEAKRLFLNIHRL----GMEMDCSIFSSVLKVSATLCDELFG 112
Query: 63 KALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACS 122
+ LH K G + +V +L++ Y K D K+F ++ + VTW L+SG+A +
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 123 HVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTL 182
++D V+ LF M + +PNS T A L A G G +H V+K GL++
Sbjct: 173 SMND-EVLTLFMRMQ-NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 183 VGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEP 242
V NSL ++Y K G V A +FD E K VV+WN++ISG + N + +A +F M
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 243 IKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRT 302
++ + ++ +++ +CA+L E F ++HC V++ L D ++ AL+ Y +
Sbjct: 291 VRLSESSFASVIKLCANLKE---LRFTEQLHCSVVKYGFLF-DQNIRTALMVAYSKCTAM 346
Query: 303 EEAELLFRRMKS-RDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLP 361
+A LF+ + ++VSW A+I+G+ ND +A++LF E+ ++ + P+ T +L
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM-KRKGVRPNEFTYSVILT 405
Query: 362 ACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLI 421
A + E+H ++ Y E + VG AL+ Y K +E A + F I +D++
Sbjct: 406 ALPVISP----SEVHAQVVKTNY-ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV 460
Query: 422 SWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFC-TTVLREGMVKETHGY 480
+W++ML ++++G + + + GI+P+ T +I++ C T G K+ HG+
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 520
Query: 481 LIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGS 540
IK+ L D+ + +A+L YAK NI+ A VF+ EK +LV++N +ISGYA G
Sbjct: 521 AIKSRL---DSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQHGQ 576
Query: 541 ADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPV 600
A +AL +F +++ + +K D VT + +
Sbjct: 577 A-------------------------------MKALDVFKEMKKRKVKMDGVTFIGVFAA 605
Query: 601 CSQMASVHLLRQCHGYVIRAC--FDGVRLNGALLHLYAKCGSIFSASKIFQCHP 652
C+ V + ++R C N ++ LY++ G + A K+ + P
Sbjct: 606 CTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659
Score = 222 bits (566), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 154/527 (29%), Positives = 267/527 (50%), Gaps = 30/527 (5%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E N +W T+I+G+ R+ ++ E L+LF + + N F+A L
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMR--MQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
G +H V K G VS +L+NLY KCG + LF + + VTWN ++SG+A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
+ +D + +FY+M + + + + + A V+ CA L + + LH V+K+G
Sbjct: 272 ANGLD-LEALGMFYSMRL-NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIE-DKDVVSWNAVISGLSENKVLGDAFRLFSWML 239
+ +L Y+K + DA +F I +VVSW A+ISG +N +A LFS M
Sbjct: 330 QNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389
Query: 240 TEPIKPN---YATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFY 296
+ ++PN Y+ IL LP+ + E+H V++ +V AL+ Y
Sbjct: 390 RKGVRPNEFTYSVILTALPVISP----------SEVHAQVVK-TNYERSSTVGTALLDAY 438
Query: 297 LRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTL 356
++ G+ EEA +F + +D+V+W+A++AGYA E A+ +F EL TK I P+ T
Sbjct: 439 VKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL-TKGGIKPNEFTF 497
Query: 357 VSLLPACAYLK-NLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMI 415
S+L CA ++ GK+ HG+ ++ L+ V +AL++ YAK ++E+A F
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIK-SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 416 CRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVK 475
+DL+SWNSM+ +++ G + L++ M ++ D +T + + CT G+V+
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACT---HAGLVE 613
Query: 476 ETHGY---LIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSL 519
E Y +++ + EHN + ++D Y++ ++ A V +++
Sbjct: 614 EGEKYFDIMVRDCKIAPTKEHN--SCMVDLYSRAGQLEKAMKVIENM 658
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 230/426 (53%), Gaps = 28/426 (6%)
Query: 8 SWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHG 67
+W ++I+G+ +GL EAL +F + ++ + VR + F++V+K C +L ++ + LH
Sbjct: 262 TWNSMISGYAANGLDLEALGMF-YSMRLN-YVRLSESSFASVIKLCANLKELRFTEQLHC 319
Query: 68 YVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNT-DPVTWNILLSGFACSHVDD 126
V K G + Q + AL+ Y+KC + D +LF ++ + V+W ++SGF + +
Sbjct: 320 SVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKE 379
Query: 127 ARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNS 186
V +LF M R +PN T +++L+A + + +HA V+K ER + VG +
Sbjct: 380 EAV-DLFSEMK-RKGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTA 433
Query: 187 LTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPN 246
L Y K G V +A VF I+DKD+V+W+A+++G ++ A ++F + IKPN
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPN 493
Query: 247 YATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAE 306
T +IL +CA+ + +G G++ H + + ++ L + + V +AL++ Y + G E AE
Sbjct: 494 EFTFSSILNVCAATNASMGQ--GKQFHGFAI-KSRLDSSLCVSSALLTMYAKKGNIESAE 550
Query: 307 LLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYL 366
+F+R + +DLVSWN++I+GYA + + +KAL++F E+ K + D VT + + AC +
Sbjct: 551 EVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM-KKRKVKMDGVTFIGVFAACTHA 609
Query: 367 KNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAA---------------YRT 411
++ G++ +R + + +V Y++ +E A +RT
Sbjct: 610 GLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRT 669
Query: 412 FLMICR 417
L CR
Sbjct: 670 ILAACR 675
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 138/582 (23%), Positives = 278/582 (47%), Gaps = 52/582 (8%)
Query: 197 VHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPI 256
+++A+++FD +D S+ +++ G S + +A RLF + ++ + + ++L +
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 257 CASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRD 316
A+L +++ FGR++HC ++ + DVSV +LV Y++ ++ +F MK R+
Sbjct: 103 SATLCDEL---FGRQLHCQCIKFG-FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN 158
Query: 317 LVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIH 376
+V+W +I+GYA N + L LF + E P+S T + L A G ++H
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRM-QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 377 GYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYN 436
+++ L++ V N+L++ Y KC ++ A F + +++WNSM+ ++ +G +
Sbjct: 218 TVVVKNG-LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 276
Query: 437 SQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIG 496
+ L + M + +R + ++I C + ++ H ++K G L + NI
Sbjct: 277 LEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF---DQNIR 333
Query: 497 NAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDL 556
A++ AY+KC + A +F+ + N+V++ +ISG
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG---------------------- 371
Query: 557 TPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVT---IMSLLPVCSQMASVHLLRQC 613
+ +ND +A+ LF +++ +G++P+ T I++ LPV S +
Sbjct: 372 ---------FLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP-------SEV 415
Query: 614 HGYVIRACFDGVRLNG-ALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMG 672
H V++ ++ G ALL Y K G + A+K+F KD+V +AM+ GYA G
Sbjct: 416 HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET 475
Query: 673 KAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYAS 732
+AA+K+F ++ + G+ P+ +++L+ C+ + F + + ++
Sbjct: 476 EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSA 535
Query: 733 LVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHE 774
L+ + A+ G I A + R E D W +++ H +
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQ 576
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 182/406 (44%), Gaps = 47/406 (11%)
Query: 301 RTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCEL--ITKEMIWPDSVTLVS 358
R A LF + RD S+ +++ G++ + +A LF + + EM D S
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEM---DCSIFSS 98
Query: 359 LLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRR 418
+L A L + G+++H ++ +L+ D +VG +LV Y K S+ + + F + R
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFGFLD-DVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 419 DLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETH 478
++++W +++ ++ + N + L L M EG +P+S T + G + H
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 479 GYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANC 538
++K GL D + N++++ Y KC
Sbjct: 218 TVVVKNGL---DKTIPVSNSLINLYLKC-------------------------------- 242
Query: 539 GSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLL 598
G+ +A + F + + + WN MI YA N +AL +F ++ ++ + S++
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Query: 599 PVCSQMASVHLLRQCHGYVIRACF---DGVRLNGALLHLYAKCGSIFSASKIF-QCHPQK 654
+C+ + + Q H V++ F +R AL+ Y+KC ++ A ++F +
Sbjct: 303 KLCANLKELRFTEQLHCSVVKYGFLFDQNIRT--ALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 655 DVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSA 700
+VV TAMI G+ + + A+ +FS+M GV P+ + +L+A
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 268/877 (30%), Positives = 452/877 (51%), Gaps = 55/877 (6%)
Query: 5 NAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLAD--ILLG 62
N SW I++G+ R+G HKEAL ++ + N F +VL++C + IL G
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEG--IFSNQYAFVSVLRACQEIGSVGILFG 123
Query: 63 KALHGYVTKLGHISCQAVSKALLNLYAKC-GVIDDCYKLFGQVDNTDPVTWNILLSGFAC 121
+ +HG + KL + VS L+++Y KC G + FG ++ + V+WN ++S +
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVY-- 181
Query: 122 SHVDDARVMNLFYNMHVRDQPKPNSVTV-AIVLSACARLG-GIFAGKSLHAYVIKFGLER 179
S D R ++ D +P T ++V +AC+ + + + + K GL
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLT 241
Query: 180 HTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWM- 238
VG+ L S +AK G + A VF+ +E ++ V+ N ++ GL K +A +LF M
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301
Query: 239 -LTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYL 297
+ + +Y +L+ P SL E+VG GRE+H +V+ + V + N LV+ Y
Sbjct: 302 SMIDVSPESYVILLSSFPE-YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYA 360
Query: 298 RFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLV 357
+ G +A +F M +D VSWN++I G N +++A+ + + + + I P S TL+
Sbjct: 361 KCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERY-KSMRRHDILPGSFTLI 419
Query: 358 SLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICR 417
S L +CA LK K+G++IHG L+ ++ + +V NAL++ YA+ + + F +
Sbjct: 420 SSLSSCASLKWAKLGQQIHGESLKLG-IDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
Query: 418 RDLISWNSMLDAF--SESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVK 475
D +SWNS++ A SE + LN G + + IT +++ +++ + K
Sbjct: 479 HDQVSWNSIIGALARSERSLPEAVVCFLNAQ-RAGQKLNRITFSSVLSAVSSLSFGELGK 537
Query: 476 ETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGY 535
+ HG +K + E NA++ Y KC + +F + E+R+ VT+N +ISGY
Sbjct: 538 QIHGLALKNNIA---DEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY 594
Query: 536 ANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIM 595
+ N+ +AL L + G + D+
Sbjct: 595 IH-------------------------------NELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 596 SLLPVCSQMASVHLLRQCHGYVIRACFDG-VRLNGALLHLYAKCGSIFSASKIFQCHPQK 654
++L + +A++ + H +RAC + V + AL+ +Y+KCG + A + F P +
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 683
Query: 655 DVVMLTAMIGGYAMHGMGKAALKVFSDM-LELGVNPDHVVITAVLSACSHAGLVDEGLEI 713
+ +MI GYA HG G+ ALK+F M L+ PDHV VLSACSHAGL++EG +
Sbjct: 684 NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKH 743
Query: 714 FRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGA-CRIH 772
F S+ G+ P E ++ + D+L R G++ + +MP++ + +W T+LGA CR +
Sbjct: 744 FESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRAN 803
Query: 773 -HEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACS 831
+ ELG+ A LF++E +N NYV++ N+YAA RW+ +V+ RK MK D+KK A S
Sbjct: 804 GRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 863
Query: 832 WIEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIKD 868
W+ ++ + F+AGD SHP D+IY L L+ +++D
Sbjct: 864 WVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRD 900
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 194/715 (27%), Positives = 328/715 (45%), Gaps = 58/715 (8%)
Query: 84 LLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPK 143
L+N Y + G K+F ++ + V+W ++SG+ S + + +F V++
Sbjct: 42 LINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGY--SRNGEHKEALVFLRDMVKEGIF 99
Query: 144 PNSVTVAIVLSACARLG--GIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAK-RGLVHDA 200
N VL AC +G GI G+ +H + K +V N L SMY K G V A
Sbjct: 100 SNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYA 159
Query: 201 YSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASL 260
F IE K+ VSWN++IS S+ AFR+FS M + +P T +++ SL
Sbjct: 160 LCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSL 219
Query: 261 DE-DVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVS 319
E DV +I C ++++ L+ D+ V + LVS + + G A +F +M++R+ V+
Sbjct: 220 TEPDVRLL--EQIMC-TIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVT 276
Query: 320 WNAIIAGYASNDEWLKALNLFCELITKEMIWPDS-VTLVSLLP--ACAYLKNLKVGKEIH 376
N ++ G +A LF ++ + + P+S V L+S P + A LK G+E+H
Sbjct: 277 LNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVH 336
Query: 377 GYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYN 436
G+ + ++ +GN LV+ YAKC + A R F + +D +SWNSM+ ++G
Sbjct: 337 GHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF 396
Query: 437 SQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIG 496
+ + M I P S T+++ + C ++ + ++ HG +K G+ D ++
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI---DLNVSVS 453
Query: 497 NAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDL 556
NA++ YA+ +GY N E FS + D
Sbjct: 454 NALMTLYAE---------------------------TGYLN-----ECRKIFSSMPEHDQ 481
Query: 557 TPWNLMIRVYA--ENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCH 614
WN +I A E P +A+ FL Q G K + +T S+L S ++ L +Q H
Sbjct: 482 VSWNSIIGALARSERSLP-EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 615 GYVIRACF-DGVRLNGALLHLYAKCGSIFSASKIF-QCHPQKDVVMLTAMIGGYAMHGMG 672
G ++ D AL+ Y KCG + KIF + ++D V +MI GY + +
Sbjct: 541 GLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELL 600
Query: 673 KAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYAS 732
AL + ML+ G D + VLSA + ++ G+E+ + ++ ++
Sbjct: 601 AKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEV-HACSVRACLESDVVVGSA 659
Query: 733 LVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFE 787
LVD+ ++ G++ A N MPV + W +++ H + E A +LFE
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQGE----EALKLFE 709
Score = 162 bits (411), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 238/500 (47%), Gaps = 44/500 (8%)
Query: 277 LRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKA 336
L + L DV +CN L++ YL G + A +F M R+ VSW I++GY+ N E +A
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 337 LNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKV--GKEIHGYFLRHPYLEEDAAVGNA 394
L +F + KE I+ + VS+L AC + ++ + G++IHG + Y DA V N
Sbjct: 87 L-VFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSY-AVDAVVSNV 144
Query: 395 LVSFYAKC-SDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRP 453
L+S Y KC + A F I ++ +SWNS++ +S++G + + M +G RP
Sbjct: 145 LISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRP 204
Query: 454 DSITILTIIHFCTTVLREG--MVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKY 511
T +++ ++ ++++ + K+GLL T+ +G+ ++ A+AK ++ Y
Sbjct: 205 TEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLL---TDLFVGSGLVSAFAKSGSLSY 261
Query: 512 AFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYAR-DLTPWNLMIRVYAEND 570
A VF +E RN VT N ++ G +EA F + + D++P + +I + +
Sbjct: 262 ARKVFNQ-METRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILL---SS 317
Query: 571 FPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDG--VRLN 628
FP +L+ + G+K R+ HG+VI V +
Sbjct: 318 FPEYSLA-----EEVGLKKG--------------------REVHGHVITTGLVDFMVGIG 352
Query: 629 GALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVN 688
L+++YAKCGSI A ++F KD V +MI G +G A++ + M +
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 689 PDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYS 748
P + + LS+C+ G +I K+ GI +L+ L A G +++
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKL-GIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 749 LVNRMPVEADCNVWGTLLGA 768
+ + MP E D W +++GA
Sbjct: 472 IFSSMP-EHDQVSWNSIIGA 490
Score = 152 bits (385), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 191/377 (50%), Gaps = 16/377 (4%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M + ++ SW ++I G ++G EA+ + ++ + + L S+ L SC SL
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFIEAVERY-KSMRRHDILPGSFTLISS-LSSCASLKWAK 432
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
LG+ +HG KLG +VS AL+ LYA+ G +++C K+F + D V+WN ++ A
Sbjct: 433 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
S + F N R K N +T + VLSA + L GK +H +K +
Sbjct: 493 RSERSLPEAVVCFLNAQ-RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADE 551
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSI-EDKDVVSWNAVISGLSENKVLGDAFRLFSWML 239
N+L + Y K G + +F + E +D V+WN++ISG N++L A L +ML
Sbjct: 552 ATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFML 611
Query: 240 TEPIKPN---YATILNILPICASLDEDVGYFFGREIH-CYVLRRAELIADVSVCNALVSF 295
+ + YAT+L+ A+L+ G E+H C V RA L +DV V +ALV
Sbjct: 612 QTGQRLDSFMYATVLSAFASVATLER------GMEVHACSV--RACLESDVVVGSALVDM 663
Query: 296 YLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVT 355
Y + GR + A F M R+ SWN++I+GYA + + +AL LF + PD VT
Sbjct: 664 YSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVT 723
Query: 356 LVSLLPACAYLKNLKVG 372
V +L AC++ L+ G
Sbjct: 724 FVGVLSACSHAGLLEEG 740
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 252/856 (29%), Positives = 427/856 (49%), Gaps = 59/856 (6%)
Query: 46 FSAVLKSCTSLADILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVD 105
FS V K C + LGK H ++ G V LL +Y +F ++
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 106 NTDPVTWNILLSGFACSHVDDARVMNLFYNMH-VRDQPKPNSV----------------- 147
D V+WN +++G++ S +D N F+NM VRD NS+
Sbjct: 111 LRDVVSWNKMINGYSKS--NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 148 -------------TVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKR 194
T AI+L C+ L G +H V++ G + + ++L MYAK
Sbjct: 169 VDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG 228
Query: 195 GLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNIL 254
++ VF I +K+ VSW+A+I+G +N +L A + F M + + ++L
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 288
Query: 255 PICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKS 314
CA+L E G ++H + L+ ++ AD V A + Y + ++A++LF ++
Sbjct: 289 RSCAALSE---LRLGGQLHAHALK-SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344
Query: 315 RDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKE 374
+ S+NA+I GY+ + KAL LF L++ + + D ++L + ACA +K L G +
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF-DEISLSGVFRACALVKGLSEGLQ 403
Query: 375 IHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESG 434
I+G ++ L D V NA + Y KC + A+R F + RRD +SWN+++ A ++G
Sbjct: 404 IYGLAIKSS-LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Query: 435 YNSQFLNLLNCMLMEGIRPDSITILTIIHFCTT-VLREGMVKETHGYLIKTGLLLGDTEH 493
+ L L ML I PD T +I+ CT L GM E H ++K+G+ +
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGM--EIHSSIVKSGMA---SNS 517
Query: 494 NIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYA 553
++G +++D Y+KC I+ A + ++ N+ G+ +E ++
Sbjct: 518 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV------------SGTMEELEKMHNKRLQ 565
Query: 554 RDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQC 613
WN +I Y + A LF ++ G+ PD T ++L C+ +AS L +Q
Sbjct: 566 EMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQI 625
Query: 614 HGYVIRACFDG-VRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMG 672
H VI+ V + L+ +Y+KCG + + +F+ ++D V AMI GYA HG G
Sbjct: 626 HAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKG 685
Query: 673 KAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYAS 732
+ A+++F M+ + P+HV ++L AC+H GL+D+GLE F +++ G+ P Y++
Sbjct: 686 EEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSN 745
Query: 733 LVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIH-HEVELGRVVANRLFEMEAD 791
+VD+L + G++ A L+ MP EAD +W TLLG C IH + VE+ L ++
Sbjct: 746 MVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQ 805
Query: 792 NIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSHPR 851
+ Y ++SN+YA W+ V ++R+ M+ LKK CSW+E++ + + F+ GD +HPR
Sbjct: 806 DSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPR 865
Query: 852 RDMIYWVLSILDEQIK 867
+ IY L ++ ++K
Sbjct: 866 WEEIYEELGLIYSEMK 881
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 174/675 (25%), Positives = 317/675 (46%), Gaps = 59/675 (8%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
+ E N+ SW II G ++ L AL F + + V + ++++VL+SC +L+++
Sbjct: 241 IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV--SQSIYASVLRSCAALSELR 298
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
LG LH + K + V A L++YAKC + D LF +N + ++N +++G++
Sbjct: 299 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
+ + LF+ + + + ++++ V ACA + G+ G ++ IK L
Sbjct: 359 -QEEHGFKALLLFHRL-MSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 416
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT 240
V N+ MY K + +A+ VFD + +D VSWNA+I+ +N + LF ML
Sbjct: 417 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 476
Query: 241 EPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFG 300
I+P+ T +IL C +GY G EIH +++ + ++ SV +L+ Y + G
Sbjct: 477 SRIEPDEFTFGSILKACTG--GSLGY--GMEIHSSIVKSG-MASNSSVGCSLIDMYSKCG 531
Query: 301 RTEEAELLFRRMKSRD--------------------LVSWNAIIAGYASNDEWLKALNLF 340
EEAE + R R VSWN+II+GY ++ A LF
Sbjct: 532 MIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLF 591
Query: 341 CELITKEM-IWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFY 399
++ EM I PD T ++L CA L + +GK+IH ++ L+ D + + LV Y
Sbjct: 592 TRMM--EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE-LQSDVYICSTLVDMY 648
Query: 400 AKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITIL 459
+KC D+ + F RRD ++WN+M+ ++ G + + L M++E I+P+ +T +
Sbjct: 649 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 708
Query: 460 TIIHFCTTVLREGMVKE--THGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQ 517
+I+ C + G++ + + Y++K L + N ++D K +K A + +
Sbjct: 709 SILRACAHM---GLIDKGLEYFYMMKRDYGLDPQLPHYSN-MVDILGKSGKVKRALELIR 764
Query: 518 SLLEKRNLVTFNPVIS----GYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPN 573
+ + + V + ++ N A+EA R+ +D + + L+ VYA+
Sbjct: 765 EMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWE 824
Query: 574 QALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDGVRLNGALLH 633
+ L ++ +K + P CS V L + H +++ G + +
Sbjct: 825 KVSDLRRNMRGFKLKKE--------PGCSW---VELKDELHVFLV-----GDKAHPRWEE 868
Query: 634 LYAKCGSIFSASKIF 648
+Y + G I+S K F
Sbjct: 869 IYEELGLIYSEMKPF 883
Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 158/607 (26%), Positives = 294/607 (48%), Gaps = 40/607 (6%)
Query: 8 SWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHG 67
SW ++++G+ ++G +++ +F + + + F+ +LK C+ L D LG +HG
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVD--MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHG 204
Query: 68 YVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDA 127
V ++G + + ALL++YAK + ++F + + V+W+ +++G +++ +
Sbjct: 205 IVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNL-LS 263
Query: 128 RVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSL 187
+ F M + S+ A VL +CA L + G LHA+ +K +V +
Sbjct: 264 LALKFFKEMQKVNAGVSQSI-YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTAT 322
Query: 188 TSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNY 247
MYAK + DA +FD+ E+ + S+NA+I+G S+ + A LF +++ + +
Sbjct: 323 LDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 382
Query: 248 ATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAEL 307
++ + CA + G G +I+ + ++ L DV V NA + Y + EA
Sbjct: 383 ISLSGVFRACALVK---GLSEGLQIYGLAI-KSSLSLDVCVANAAIDMYGKCQALAEAFR 438
Query: 308 LFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLK 367
+F M+ RD VSWNAIIA + N + + L LF ++ + I PD T S+L AC
Sbjct: 439 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML-RSRIEPDEFTFGSILKACTG-G 496
Query: 368 NLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRD-------- 419
+L G EIH ++ + +++VG +L+ Y+KC +E A + +R
Sbjct: 497 SLGYGMEIHSSIVKSG-MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEE 555
Query: 420 ------------LISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTT 467
+SWNS++ + + L M+ GI PD T T++ C
Sbjct: 556 LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCAN 615
Query: 468 VLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVT 527
+ G+ K+ H +IK L ++ I + ++D Y+KC ++ + +F+ L +R+ VT
Sbjct: 616 LASAGLGKQIHAQVIKKEL---QSDVYICSTLVDMYSKCGDLHDSRLMFEKSL-RRDFVT 671
Query: 528 FNPVISGYANCGSADEAFMTFSRIYARDLTPWNL----MIRVYAENDFPNQALSLFLKLQ 583
+N +I GYA+ G +EA F R+ ++ P ++ ++R A ++ L F ++
Sbjct: 672 WNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMK 731
Query: 584 AQ-GMKP 589
G+ P
Sbjct: 732 RDYGLDP 738
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 177/694 (25%), Positives = 300/694 (43%), Gaps = 101/694 (14%)
Query: 128 RVMNLFYNMHVRDQPKPNSVT-VAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNS 186
RV + Y +Q S T + V CA+ G + GK HA++I G T V N
Sbjct: 29 RVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNC 88
Query: 187 LTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLF---------SW 237
L +Y A VFD + +DVVSWN +I+G S++ + A F SW
Sbjct: 89 LLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSW 148
Query: 238 ----------------------MLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCY 275
M E I+ + T IL +C+ L++ G +IH
Sbjct: 149 NSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTS---LGMQIHGI 205
Query: 276 VLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLK 335
V+R DV +AL+ Y + R E+ +F+ + ++ VSW+AIIAG N+
Sbjct: 206 VVRVG-CDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSL 264
Query: 336 ALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNAL 395
AL F E+ S+ S+L +CA L L++G ++H + L+ + D V A
Sbjct: 265 ALKFFKEMQKVNAGVSQSI-YASVLRSCAALSELRLGGQLHAHALKSDF-AADGIVRTAT 322
Query: 396 VSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDS 455
+ YAKC +M+ A F + S+N+M+ +S+ + + L L + ++ G+ D
Sbjct: 323 LDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 382
Query: 456 ITILTIIHFCTTV--LREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAF 513
I++ + C V L EG+ + +G IK+ L L + + NA +D Y KC+ + AF
Sbjct: 383 ISLSGVFRACALVKGLSEGL--QIYGLAIKSSLSL---DVCVANAAIDMYGKCQALAEAF 437
Query: 514 NVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPN 573
VF + +R+ V++N +I+ + G E
Sbjct: 438 RVFDE-MRRRDAVSWNAIIAAHEQNGKGYE------------------------------ 466
Query: 574 QALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDGVRLNG-ALL 632
L LF+ + ++PD T S+L C+ S+ + H ++++ G +L+
Sbjct: 467 -TLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLI 524
Query: 633 HLYAKCGSIFSASKI----FQ----------------CHPQKDVVMLTAMIGGYAMHGMG 672
+Y+KCG I A KI FQ Q+ V ++I GY M
Sbjct: 525 DMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQS 584
Query: 673 KAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYAS 732
+ A +F+ M+E+G+ PD VL C++ G +I + K + ++ ++
Sbjct: 585 EDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE-LQSDVYICST 643
Query: 733 LVDLLARGGQISDAYSLVNRMPVEADCNVWGTLL 766
LVD+ ++ G + D+ L+ + D W ++
Sbjct: 644 LVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMI 676
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 243/862 (28%), Positives = 427/862 (49%), Gaps = 55/862 (6%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCT--SLA- 57
M E +W +I L E LF + S +V N FS VL++C S+A
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMV--SENVTPNEGTFSGVLEACRGGSVAF 203
Query: 58 DILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLS 117
D++ + +H + G V L++LY++ G +D ++F + D +W ++S
Sbjct: 204 DVV--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 118 GFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGL 177
G + + + A + LF +M+V P + VLSAC ++ + G+ LH V+K G
Sbjct: 262 GLSKNECE-AEAIRLFCDMYVLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 178 ERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSW 237
T V N+L S+Y G + A +F ++ +D V++N +I+GLS+ A LF
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 238 MLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYL 297
M + ++P+ T+ +++ C++ D F G+++H Y + ++ + AL++ Y
Sbjct: 380 MHLDGLEPDSNTLASLVVACSA---DGTLFRGQQLHAYTTKLG-FASNNKIEGALLNLYA 435
Query: 298 RFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLV 357
+ E A F + ++V WN ++ Y D+ + +F ++ +E++ P+ T
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV-PNQYTYP 494
Query: 358 SLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICR 417
S+L C L +L++G++IH ++ + + +A V + L+ YAK ++ A+ +
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNF-QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 418 RDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCT--TVLREGMVK 475
+D++SW +M+ +++ ++ + L ML GIR D + + + C L+EG +
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG--Q 611
Query: 476 ETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGY 535
+ H +G +L N +++ Y
Sbjct: 612 QIHAQACVSGF-----------------------------------SSDLPFQNALVTLY 636
Query: 536 ANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIM 595
+ CG +E+++ F + A D WN ++ + ++ +AL +F+++ +G+ + T
Sbjct: 637 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 696
Query: 596 SLLPVCSQMASVHLLRQCHGYVIRACFDG-VRLNGALLHLYAKCGSIFSASKIFQCHPQK 654
S + S+ A++ +Q H + + +D + AL+ +YAKCGSI A K F K
Sbjct: 697 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 756
Query: 655 DVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIF 714
+ V A+I Y+ HG G AL F M+ V P+HV + VLSACSH GLVD+G+ F
Sbjct: 757 NEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYF 816
Query: 715 RSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHE 774
S+ G+ P PE Y +VD+L R G +S A + MP++ D VW TLL AC +H
Sbjct: 817 ESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKN 876
Query: 775 VELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIE 834
+E+G A+ L E+E ++ YV++SNLYA +WD R+ MK + +KK SWIE
Sbjct: 877 MEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 936
Query: 835 VERKNNAFMAGDYSHPRRDMIY 856
V+ ++F GD +HP D I+
Sbjct: 937 VKNSIHSFYVGDQNHPLADEIH 958
Score = 254 bits (648), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 204/742 (27%), Positives = 344/742 (46%), Gaps = 58/742 (7%)
Query: 39 VRHNHQLFSAVLKSCTSLADIL-LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDC 97
+R NHQ +L+ C L G+ LH + KLG S +S+ L + Y G +
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 98 YKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACA 157
+K+F ++ TWN ++ A ++ V LF M V + PN T + VL AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNL-IGEVFGLFVRM-VSENVTPNEGTFSGVLEACR 197
Query: 158 RLGGIFAG---KSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVS 214
GG A + +HA ++ GL T+V N L +Y++ G V A VFD + KD S
Sbjct: 198 --GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 215 WNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHC 274
W A+ISGLS+N+ +A RLF M I P ++L C ++ G ++H
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE---SLEIGEQLHG 312
Query: 275 YVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWL 334
VL+ +D VCNALVS Y G AE +F M RD V++N +I G +
Sbjct: 313 LVLKLG-FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 335 KALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNA 394
KA+ LF + + + + PDS TL SL+ AC+ L G+++H Y + + + G A
Sbjct: 372 KAMELF-KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG-A 429
Query: 395 LVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPD 454
L++ YAKC+D+E A FL +++ WN ML A+ + M +E I P+
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 455 SITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFN 514
T +I+ C + + ++ H +IKT L + + ++D YAK + A++
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY---VCSVLIDMYAKLGKLDTAWD 546
Query: 515 VFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQ 574
+ K ++V++ +I+GY T +N F ++
Sbjct: 547 ILIRFAGK-DVVSWTTMIAGY---------------------TQYN----------FDDK 574
Query: 575 ALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDG----VRLNGA 630
AL+ F ++ +G++ D V + + + C+ + ++ +Q H +AC G + A
Sbjct: 575 ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA---QACVSGFSSDLPFQNA 631
Query: 631 LLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPD 690
L+ LY++CG I + F+ D + A++ G+ G + AL+VF M G++ +
Sbjct: 632 LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNN 691
Query: 691 HVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLV 750
+ + + A S + +G ++ I K G E +L+ + A+ G ISDA
Sbjct: 692 NFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 751 NRMPVEADCNVWGTLLGACRIH 772
+ + + + W ++ A H
Sbjct: 751 LEVSTKNEVS-WNAIINAYSKH 771
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Query: 582 LQAQGMKPDAVTIMSLLPVCSQM-ASVHLLRQCHGYVIRACFDGVR-LNGALLHLYAKCG 639
++ +G++P+ T+ LL C + S+ R+ H +++ D L+ L Y G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 640 SIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLS 699
++ A K+F P++ + MI A + +F M+ V P+ + VL
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 700 ACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGG 741
AC + + +E + QG++ + L+DL +R G
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNG 236
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/720 (31%), Positives = 386/720 (53%), Gaps = 45/720 (6%)
Query: 150 AIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIED 209
A++L C+ L + + + V K GL + L S++ + G V +A VF+ I+
Sbjct: 41 ALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97
Query: 210 KDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFG 269
K V ++ ++ G ++ L A + F M + ++P +L +C ++ G
Sbjct: 98 KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCG---DEAELRVG 154
Query: 270 REIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYAS 329
+EIH +L ++ D+ L + Y + + EA +F RM RDLVSWN I+AGY+
Sbjct: 155 KEIHG-LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 330 NDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDA 389
N AL + + + +E + P +T+VS+LPA + L+ + VGKEIHGY +R + +
Sbjct: 214 NGMARMALEM-VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF-DSLV 271
Query: 390 AVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLME 449
+ ALV YAKC +E A + F + R+++SWNSM+DA+ ++ + + + ML E
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331
Query: 450 GIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNI 509
G++P ++++ +H C LGD E
Sbjct: 332 GVKPTDVSVMGALHACAD--------------------LGDLERG--------------- 356
Query: 510 KYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAEN 569
++ + L RN+ N +IS Y C D A F ++ +R L WN MI +A+N
Sbjct: 357 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN 416
Query: 570 DFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFD-GVRLN 628
P AL+ F +++++ +KPD T +S++ ++++ H + HG V+R+C D V +
Sbjct: 417 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT 476
Query: 629 GALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVN 688
AL+ +YAKCG+I A IF ++ V AMI GY HG GKAAL++F +M + +
Sbjct: 477 TALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIK 536
Query: 689 PDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYS 748
P+ V +V+SACSH+GLV+ GL+ F +++ I+ + + Y ++VDLL R G++++A+
Sbjct: 537 PNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWD 596
Query: 749 LVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADAR 808
+ +MPV+ NV+G +LGAC+IH V A RLFE+ D+ G +V+++N+Y A +
Sbjct: 597 FIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASM 656
Query: 809 WDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIKD 868
W+ V ++R M + L+K CS +E++ + ++F +G +HP IY L L IK+
Sbjct: 657 WEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKE 716
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 195/713 (27%), Positives = 331/713 (46%), Gaps = 73/713 (10%)
Query: 36 SPSVRHNHQL--------------FSAVLKSCTSLADILLGKALHGYVTKLGHISCQAVS 81
+P RH H L + +L+ C+SL ++ + + V K G
Sbjct: 16 NPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQ 72
Query: 82 KALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA-CSHVDDARVMNLFYNMHVRD 140
L++L+ + G +D+ ++F +D+ V ++ +L GFA S +D A + F M D
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKA--LQFFVRMRY-D 129
Query: 141 QPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDA 200
+P +L C + GK +H ++K G L +MYAK V++A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 201 YSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASL 260
VFD + ++D+VSWN +++G S+N + A + M E +KP++ TI+++LP ++L
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 261 DEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSW 320
G+EIH Y +R + V++ ALV Y + G E A LF M R++VSW
Sbjct: 250 RL---ISVGKEIHGYAMRSG-FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 321 NAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFL 380
N++I Y N+ +A+ +F +++ E + P V+++ L ACA L +L+ G+ IH +
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKML-DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Query: 381 RHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFL 440
L+ + +V N+L+S Y KC +++ A F + R L+SWN+M+ F+++G L
Sbjct: 365 ELG-LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDAL 423
Query: 441 NLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAIL 500
N + M ++PD+ T +++I + K HG ++++ L D + A++
Sbjct: 424 NYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL---DKNVFVTTALV 480
Query: 501 DAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWN 560
D YAKC I A +F ++ +R++ T+N +I GY G
Sbjct: 481 DMYAKCGAIMIARLIFD-MMSERHVTTWNAMIDGYGTHG--------------------- 518
Query: 561 LMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQC-----HG 615
F AL LF ++Q +KP+ VT +S++ CS V +C
Sbjct: 519 ----------FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKEN 568
Query: 616 YVIRACFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVV-MLTAMIGGYAMHGMGKA 674
Y I D GA++ L + G + A P K V + AM+G +H
Sbjct: 569 YSIELSMDHY---GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNF 625
Query: 675 ALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTP 727
A K + EL NPD +L+ A + E + R QG++ TP
Sbjct: 626 AEKAAERLFEL--NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTP 676
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 245/477 (51%), Gaps = 23/477 (4%)
Query: 11 TIINGFCRDGLHKEALSLFAH-ELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHGYV 69
T++ GF + +AL F V +N F+ +LK C A++ +GK +HG +
Sbjct: 105 TMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYN---FTYLLKVCGDEAELRVGKEIHGLL 161
Query: 70 TKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDARV 129
K G L N+YAKC +++ K+F ++ D V+WN +++G++ + + AR+
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGM--ARM 219
Query: 130 MNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTS 189
+ KP+ +T+ VL A + L I GK +H Y ++ G + + +L
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 190 MYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYAT 249
MYAK G + A +FD + +++VVSWN++I +N+ +A +F ML E +KP +
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 250 ILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLF 309
++ L CA L + GR IH + L +VSV N+L+S Y + + A +F
Sbjct: 340 VMGALHACADLGD---LERGRFIHKLSVELG-LDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 310 RRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNL 369
+++SR LVSWNA+I G+A N + ALN F ++ ++ + PD+ T VS++ A A L
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR-TVKPDTFTYVSVITAIAELSIT 454
Query: 370 KVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDA 429
K IHG +R L+++ V ALV YAKC + A F M+ R + +WN+M+D
Sbjct: 455 HHAKWIHGVVMR-SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
Query: 430 FSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGL 486
+ G+ L L M I+P+ +T L++I C +H L++ GL
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC-----------SHSGLVEAGL 559
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 196/365 (53%), Gaps = 9/365 (2%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E + SW TI+ G+ ++G+ + AL + + + ++ + +VL + ++L I
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN--LKPSFITIVSVLPAVSALRLIS 253
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
+GK +HGY + G S +S AL+++YAKCG ++ +LF + + V+WN ++ +
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
+ ++ + L + + + KP V+V L ACA LG + G+ +H ++ GL+R+
Sbjct: 314 QN--ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT 240
V NSL SMY K V A S+F ++ + +VSWNA+I G ++N DA FS M +
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 241 EPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFG 300
+KP+ T ++++ A L + IH V+R L +V V ALV Y + G
Sbjct: 432 RTVKPDTFTYVSVITAIAELSIT---HHAKWIHGVVMRSC-LDKNVFVTTALVDMYAKCG 487
Query: 301 RTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLL 360
A L+F M R + +WNA+I GY ++ AL LF E+ K I P+ VT +S++
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM-QKGTIKPNGVTFLSVI 546
Query: 361 PACAY 365
AC++
Sbjct: 547 SACSH 551
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 251/827 (30%), Positives = 420/827 (50%), Gaps = 51/827 (6%)
Query: 39 VRHNHQLFSAVLKSCTSLADILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCY 98
R + S L S ++L ++ + +H V LG S S L++ Y+
Sbjct: 3 TRVSSPFISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSL 59
Query: 99 KLFGQVDNTDPV-TWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACA 157
+F +V V WN ++ F+ + + + FY + P+ T V+ ACA
Sbjct: 60 SVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALE--FYGKLRESKVSPDKYTFPSVIKACA 117
Query: 158 RLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNA 217
L G ++ ++ G E VGN+L MY++ GL+ A VFD + +D+VSWN+
Sbjct: 118 GLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNS 177
Query: 218 VISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVL 277
+ISG S + +A ++ + I P+ T+ ++LP +L + G+ +H + L
Sbjct: 178 LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL---LVVKQGQGLHGFAL 234
Query: 278 RRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKAL 337
+ V N LV+ YL+F R +A +F M RD VS+N +I GY + +++
Sbjct: 235 KSGVNSVVVVN-NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESV 293
Query: 338 NLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVS 397
+F E + + PD +T+ S+L AC +L++L + K I+ Y L+ ++ E + V N L+
Sbjct: 294 RMFLENL--DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLE-STVRNILID 350
Query: 398 FYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSIT 457
YAKC DM A F + +D +SWNS++ + +SG + + L M++ + D IT
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 458 ILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQ 517
L +I T + K H IK+G+ + + ++ NA++D YAK
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICI---DLSVSNALIDMYAK------------ 455
Query: 518 SLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAE-NDFPNQAL 576
CG ++ FS + D WN +I DF L
Sbjct: 456 --------------------CGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFAT-GL 494
Query: 577 SLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDG-VRLNGALLHLY 635
+ +++ + PD T + LP+C+ +A+ L ++ H ++R ++ +++ AL+ +Y
Sbjct: 495 QVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMY 554
Query: 636 AKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVIT 695
+KCG + ++S++F+ ++DVV T MI Y M+G G+ AL+ F+DM + G+ PD VV
Sbjct: 555 SKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFI 614
Query: 696 AVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPV 755
A++ ACSH+GLVDEGL F ++ I P E YA +VDLL+R +IS A + MP+
Sbjct: 615 AIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPI 674
Query: 756 EADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEI 815
+ D ++W ++L ACR ++E V+ R+ E+ D+ G ++ SN YAA +WD V I
Sbjct: 675 KPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLI 734
Query: 816 RKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSIL 862
RK +K + + K SWIEV + + F +GD S P+ + IY L IL
Sbjct: 735 RKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEIL 781
Score = 226 bits (576), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 181/697 (25%), Positives = 337/697 (48%), Gaps = 67/697 (9%)
Query: 5 NAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKA 64
N W +II F ++GL EAL + +S V + F +V+K+C L D +G
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRES--KVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 65 LHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHV 124
++ + +G S V AL+++Y++ G++ ++F ++ D V+WN L+SG++ SH
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS-SHG 186
Query: 125 DDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVG 184
+ +++ + P+S TV+ VL A L + G+ LH + +K G+ +V
Sbjct: 187 YYEEALEIYHELK-NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 185 NSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIK 244
N L +MY K DA VFD ++ +D VS+N +I G + +++ ++ R+F L + K
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FK 304
Query: 245 PNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEE 304
P+ T+ ++L C L + + I+ Y+L +A + + +V N L+ Y + G
Sbjct: 305 PDLLTVSSVLRACGHLRD---LSLAKYIYNYML-KAGFVLESTVRNILIDVYAKCGDMIT 360
Query: 305 AELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACA 364
A +F M+ +D VSWN+II+GY + + ++A+ LF ++ E D +T + L+
Sbjct: 361 ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISVST 419
Query: 365 YLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWN 424
L +LK GK +H ++ + D +V NAL+ YAKC ++ + + F + D ++WN
Sbjct: 420 RLADLKFGKGLHSNGIKSG-ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWN 478
Query: 425 SMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKT 484
+++ A G + L + M + PD T L + C ++ + + KE H L++
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538
Query: 485 GLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEA 544
G ++E IGNA+++ Y+KC ++ + VF+ + +R++VT+ +I Y G ++A
Sbjct: 539 GY---ESELQIGNALIEMYSKCGCLENSSRVFER-MSRRDVVTWTGMIYAYGMYGEGEKA 594
Query: 545 FMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQM 604
TF+ ++ G+ PD+V ++++ CS
Sbjct: 595 LETFA-------------------------------DMEKSGIVPDSVVFIAIIYACSHS 623
Query: 605 ASVHLLRQCHGYVIRACFDGVRLN----------GALLHLYAKCGSIFSASKIFQCHPQK 654
V G ACF+ ++ + ++ L ++ I A + Q P K
Sbjct: 624 GLVD-----EGL---ACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIK 675
Query: 655 -DVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPD 690
D + +++ G + A +V ++EL NPD
Sbjct: 676 PDASIWASVLRACRTSGDMETAERVSRRIIEL--NPD 710
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/674 (32%), Positives = 367/674 (54%), Gaps = 40/674 (5%)
Query: 199 DAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICA 258
DA +F + + + WN ++ LS K + FS M + KP+ T+ L C
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 259 SLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLV 318
L E V Y G IH +V + L +D+ V ++L+ Y++ GR EA +F ++ D+V
Sbjct: 72 ELRE-VNY--GEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIV 128
Query: 319 SWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGY 378
+W+++++G+ N +A+ F ++ + PD VTL++L+ AC L N ++G+ +HG+
Sbjct: 129 TWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGF 188
Query: 379 FLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQ 438
+R + D ++ N+L++ YAK + A F MI +D+ISW++++ + ++G ++
Sbjct: 189 VIRRGF-SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAE 247
Query: 439 FLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNA 498
L + N M+ +G P+ T+L ++ C ++TH I+ GL +TE + A
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGL---ETEVKVSTA 304
Query: 499 ILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTP 558
++D Y KC + + A+ VF S + ++++V++ +ISG+ G A + FS
Sbjct: 305 LVDMYMKCFSPEEAYAVF-SRIPRKDVVSWVALISGFTLNGMAHRSIEEFS--------- 354
Query: 559 WNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVI 618
+ L +PDA+ ++ +L CS++ + + H YVI
Sbjct: 355 ---------------------IMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVI 393
Query: 619 RACFDGVRLNGA-LLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALK 677
+ FD GA L+ LY++CGS+ +ASK+F KD V+ T++I GY +HG G AL+
Sbjct: 394 KYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALE 453
Query: 678 VFSDMLELG-VNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDL 736
F+ M++ V P+ V ++LSACSHAGL+ EGL IF+ + + P E YA LVDL
Sbjct: 454 TFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDL 513
Query: 737 LARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNY 796
L R G + A + RMP + GTLLGACRIH E+ VA +LFE+E+++ G Y
Sbjct: 514 LGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYY 573
Query: 797 VVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIY 856
++MSN+Y W+ V ++R +K R +KK A S IE+ RK + F+A D HP ++ +Y
Sbjct: 574 MLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVY 633
Query: 857 WVLSILDEQIKDQV 870
+L LD +K+ +
Sbjct: 634 GLLKELDLHMKEDL 647
Score = 219 bits (558), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 175/644 (27%), Positives = 306/644 (47%), Gaps = 68/644 (10%)
Query: 96 DCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSA 155
D ++FG++ WN LL + V+ F +M RD+ KP++ T+ + L A
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLS-REKQWEEVLYHFSHM-FRDEEKPDNFTLPVALKA 69
Query: 156 CARLGGIFAGKSLHAYVIK-FGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVS 214
C L + G+ +H +V K L VG+SL MY K G + +A +FD +E D+V+
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 215 WNAVISGLSENKVLGDAFRLFSWM-LTEPIKPNYATILNILPICASLDEDVGYFFGREIH 273
W++++SG +N A F M + + P+ T++ ++ C L GR +H
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR---LGRCVH 186
Query: 274 CYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEW 333
+V+RR D+S+ N+L++ Y + +EA LF+ + +D++SW+ +IA Y N
Sbjct: 187 GFVIRRG-FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 334 LKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGN 393
+AL +F +++ + P+ T++ +L ACA +L+ G++ H +R LE + V
Sbjct: 246 AEALLVFNDMM-DDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKG-LETEVKVST 303
Query: 394 ALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLME-GIR 452
ALV Y KC E AY F I R+D++SW +++ F+ +G + + + ML+E R
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 363
Query: 453 PDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYA 512
PD+I ++ ++ C+ + K H Y+IK G D+ IG ++++ Y++C ++ A
Sbjct: 364 PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGF---DSNPFIGASLVELYSRCGSLGNA 420
Query: 513 FNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFP 572
VF + K + V + +I+GY G +A TF+ +
Sbjct: 421 SKVFNGIALK-DTVVWTSLITGYGIHGKGTKALETFNHM--------------------- 458
Query: 573 NQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHL-LRQCHGYVIRACFDGVRLNGAL 631
+++ +KP+ VT +S+L CS +H LR + + + RL L
Sbjct: 459 ---------VKSSEVKPNEVTFLSILSACSHAGLIHEGLR-----IFKLMVNDYRLAPNL 504
Query: 632 LH------LYAKCGSIFSASKI-----FQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFS 680
H L + G + +A +I F PQ +L ++G +H G+ A V
Sbjct: 505 EHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQ----ILGTLLGACRIHQNGEMAETVAK 560
Query: 681 DMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIK 724
+ EL N H ++S E +E R+ K +GIK
Sbjct: 561 KLFELESN--HAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIK 602
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 252/479 (52%), Gaps = 16/479 (3%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M + + W T++ R+ +E L F+H + + ++ LK+C L ++
Sbjct: 20 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE--KPDNFTLPVALKACGELREVN 77
Query: 61 LGKALHGYVTK---LGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLS 117
G+ +HG+V K LG S V +L+ +Y KCG + + ++F +++ D VTW+ ++S
Sbjct: 78 YGEMIHGFVKKDVTLG--SDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVS 135
Query: 118 GFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGL 177
GF + + + F M + P+ VT+ ++SAC +L G+ +H +VI+ G
Sbjct: 136 GFE-KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF 194
Query: 178 ERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSW 237
+ NSL + YAK +A ++F I +KDV+SW+ VI+ +N +A +F+
Sbjct: 195 SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND 254
Query: 238 MLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYL 297
M+ + +PN AT+L +L CA+ + GR+ H +R+ L +V V ALV Y+
Sbjct: 255 MMDDGTEPNVATVLCVLQACAAAHD---LEQGRKTHELAIRKG-LETEVKVSTALVDMYM 310
Query: 298 RFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLV 357
+ EEA +F R+ +D+VSW A+I+G+ N +++ F ++ + PD++ +V
Sbjct: 311 KCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMV 370
Query: 358 SLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICR 417
+L +C+ L L+ K H Y +++ + + + +G +LV Y++C + A + F I
Sbjct: 371 KVLGSCSELGFLEQAKCFHSYVIKYGF-DSNPFIGASLVELYSRCGSLGNASKVFNGIAL 429
Query: 418 RDLISWNSMLDAFSESGYNSQFLNLLNCMLMEG-IRPDSITILTIIHFCT--TVLREGM 473
+D + W S++ + G ++ L N M+ ++P+ +T L+I+ C+ ++ EG+
Sbjct: 430 KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 488
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 240/483 (49%), Gaps = 41/483 (8%)
Query: 293 VSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPD 352
+ F +F + +A +F M R L WN ++ + +W + L F + E PD
Sbjct: 1 MGFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPD 59
Query: 353 SVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTF 412
+ TL L AC L+ + G+ IHG+ + L D VG++L+ Y KC M A R F
Sbjct: 60 NFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMF 119
Query: 413 LMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEG-IRPDSITILTIIHFCTTVLRE 471
+ + D+++W+SM+ F ++G Q + M+M + PD +T++T++ CT +
Sbjct: 120 DELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNS 179
Query: 472 GMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPV 531
+ + HG++I+ G + ++ N++L+ YAK R K A N+F+ + EK ++++++ V
Sbjct: 180 RLGRCVHGFVIRRGF---SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK-DVISWSTV 235
Query: 532 ISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDA 591
I+ Y G+A EA + F ND + G +P+
Sbjct: 236 IACYVQNGAAAEALLVF--------------------ND-----------MMDDGTEPNV 264
Query: 592 VTIMSLLPVCSQMASVHLLRQCHGYVIRACFDG-VRLNGALLHLYAKCGSIFSASKIFQC 650
T++ +L C+ + R+ H IR + V+++ AL+ +Y KC S A +F
Sbjct: 265 ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSR 324
Query: 651 HPQKDVVMLTAMIGGYAMHGMGKAALKVFSDM-LELGVNPDHVVITAVLSACSHAGLVDE 709
P+KDVV A+I G+ ++GM +++ FS M LE PD +++ VL +CS G +++
Sbjct: 325 IPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQ 384
Query: 710 GLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGAC 769
+ F S G P ASLV+L +R G + +A + N + ++ D VW +L+
Sbjct: 385 A-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGY 442
Query: 770 RIH 772
IH
Sbjct: 443 GIH 445
Score = 163 bits (412), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 203/415 (48%), Gaps = 20/415 (4%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
+ +P+ +W ++++GF ++G +A+ F + +S V + ++ +CT L++
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMAS-DVTPDRVTLITLVSACTKLSNSR 180
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
LG+ +HG+V + G + ++ +LLN YAK + LF + D ++W+ ++ A
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI---A 237
Query: 121 CSHVDDARVMNLF-YNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLER 179
C + A L +N + D +PN TV VL ACA + G+ H I+ GLE
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET 297
Query: 180 HTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWML 239
V +L MY K +AY+VF I KDVVSW A+ISG + N + + FS ML
Sbjct: 298 EVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIML 357
Query: 240 TEP-IKPNYATILNILPICASLDEDVGYF-FGREIHCYVLRRAELIADVSVCNALVSFYL 297
E +P+ ++ +L C+ L G+ + H YV++ ++ + +LV Y
Sbjct: 358 LENNTRPDAILMVKVLGSCSEL----GFLEQAKCFHSYVIKYG-FDSNPFIGASLVELYS 412
Query: 298 RFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLV 357
R G A +F + +D V W ++I GY + + KAL F ++ + P+ VT +
Sbjct: 413 RCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFL 472
Query: 358 SLLPACAYL----KNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAA 408
S+L AC++ + L++ K + + P LE A LV + D++ A
Sbjct: 473 SILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYA----VLVDLLGRVGDLDTA 523
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 16/242 (6%)
Query: 540 SADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLP 599
S+ +A F + R L WN +++ + + L F + KPD T+ L
Sbjct: 9 SSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALK 68
Query: 600 VCSQMASVHLLRQCHGYVIRACFDGVRL--NGALLHLYAKCGSIFSASKIFQCHPQKDVV 657
C ++ V+ HG+V + G L +L+++Y KCG + A ++F + D+V
Sbjct: 69 ACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIV 128
Query: 658 MLTAMIGGYAMHGMGKAALKVFSDM-LELGVNPDHVVITAVLSAC-----SHAGLVDEGL 711
++M+ G+ +G A++ F M + V PD V + ++SAC S G G
Sbjct: 129 TWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGF 188
Query: 712 EIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRI 771
I R G SL++ A+ +A +L +M E D W T++ AC +
Sbjct: 189 VIRR------GFSNDLSLVNSLLNCYAKSRAFKEAVNLF-KMIAEKDVISWSTVI-ACYV 240
Query: 772 HH 773
+
Sbjct: 241 QN 242
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/724 (31%), Positives = 385/724 (53%), Gaps = 50/724 (6%)
Query: 152 VLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKD 211
++ AC+ + G+ +H +++ + T++ N + SMY K G + DA VFD + +++
Sbjct: 73 LICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERN 132
Query: 212 VVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGRE 271
+VS+ +VI+G S+N +A RL+ ML E + P+ +I+ CAS DVG G++
Sbjct: 133 LVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACAS-SSDVG--LGKQ 189
Query: 272 IHCYVLR---RAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYA 328
+H V++ + LIA NAL++ Y+RF + +A +F + +DL+SW++IIAG++
Sbjct: 190 LHAQVIKLESSSHLIAQ----NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 329 SNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEED 388
+AL+ E+++ + P+ S L AC+ L G +IHG ++ L +
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE-LAGN 304
Query: 389 AAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLM 448
A G +L YA+C + +A R F I R D SWN ++ + +GY + +++ + M
Sbjct: 305 AIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS 364
Query: 449 EGIRPDSITILTIIHFCTT--VLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKC 506
G PD+I++ +++ T L +GM + H Y+IK G L T + N++L Y C
Sbjct: 365 SGFIPDAISLRSLLCAQTKPMALSQGM--QIHSYIIKWGFLADLT---VCNSLLTMYTFC 419
Query: 507 RNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVY 566
++ FN+F+ RN D WN ++
Sbjct: 420 SDLYCCFNLFEDF---RN----------------------------NADSVSWNTILTAC 448
Query: 567 AENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDGVR 626
+++ P + L LF + +PD +T+ +LL C +++S+ L Q H Y ++ +
Sbjct: 449 LQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQ 508
Query: 627 -LNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLEL 685
+ L+ +YAKCGS+ A +IF +DVV + +I GYA G G+ AL +F +M
Sbjct: 509 FIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA 568
Query: 686 GVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISD 745
G+ P+HV VL+ACSH GLV+EGL+++ +++ GI PT E + +VDLLAR G++++
Sbjct: 569 GIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNE 628
Query: 746 AYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAA 805
A ++ M +E D VW TLL AC+ V L + A + +++ N +V++ +++A+
Sbjct: 629 AERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHAS 688
Query: 806 DARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQ 865
W+ +R MK D+KK SWIE+E K + F A D HP RD IY VL + Q
Sbjct: 689 SGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQ 748
Query: 866 IKDQ 869
+ D+
Sbjct: 749 MLDE 752
Score = 226 bits (575), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 198/784 (25%), Positives = 359/784 (45%), Gaps = 79/784 (10%)
Query: 13 INGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHGYVTKL 72
IN C+ ++EAL F Q + S + + + +++ +C+S + G+ +H ++
Sbjct: 38 INSLCKSNFYREALEAFDFA-QKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNS 96
Query: 73 GHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNL 132
++ +L++Y KCG + D ++F + + V++ +++G++ + A + L
Sbjct: 97 NCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYS-QNGQGAEAIRL 155
Query: 133 FYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYA 192
+ M +++ P+ ++ ACA + GK LHA VIK H + N+L +MY
Sbjct: 156 YLKM-LQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 193 KRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPI-KPNYATIL 251
+ + DA VF I KD++SW+++I+G S+ +A ML+ + PN
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 252 NILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRR 311
+ L C+SL + +G +IH ++ +EL + +L Y R G A +F +
Sbjct: 275 SSLKACSSL---LRPDYGSQIHGLCIK-SELAGNAIAGCSLCDMYARCGFLNSARRVFDQ 330
Query: 312 MKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKV 371
++ D SWN IIAG A+N +A+++F ++ + I PD+++L SLL A L
Sbjct: 331 IERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI-PDAISLRSLLCAQTKPMALSQ 389
Query: 372 GKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRR-DLISWNSMLDAF 430
G +IH Y ++ +L D V N+L++ Y CSD+ + F D +SWN++L A
Sbjct: 390 GMQIHSYIIKWGFLA-DLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTAC 448
Query: 431 SESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGD 490
+ + L L ML+ PD IT+ ++ C + + + H Y +KTGL
Sbjct: 449 LQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLA--- 505
Query: 491 TEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSR 550
E I N ++D YAKC ++ A +F S+ + R++V+++ +I GYA G
Sbjct: 506 PEQFIKNGLIDMYAKCGSLGQARRIFDSM-DNRDVVSWSTLIVGYAQSG----------- 553
Query: 551 IYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLL 610
F +AL LF ++++ G++P+ VT + +L CS + V
Sbjct: 554 --------------------FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVE-- 591
Query: 611 RQCHGYVIRACFDGVRLN----GALLHLYAKCGSIFSASK-IFQCHPQKDVVMLTAMIGG 665
Y G+ ++ L A+ G + A + I + + DVV+ ++
Sbjct: 592 EGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSA 651
Query: 666 YAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACS-HAGLVD-EGLEIFRSIEKVQGI 723
G A K ++L++ D TA + CS HA + E + RS K +
Sbjct: 652 CKTQGNVHLAQKAAENILKI----DPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDV 707
Query: 724 KPTPEQYASLVDLLAR----------GGQISDAYSLVNRMPVEADCNVWGTLLGACRIHH 773
K P Q S +++ + + D Y++++ N+W +L C H
Sbjct: 708 KKIPGQ--SWIEIEDKIHIFFAEDIFHPERDDIYTVLH--------NIWSQMLDECNPQH 757
Query: 774 EVEL 777
+ L
Sbjct: 758 KKRL 761
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 248/485 (51%), Gaps = 29/485 (5%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E N S+ ++I G+ ++G EA+ L+ LQ + + F +++K+C S +D+
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQED--LVPDQFAFGSIIKACASSSDVG 185
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGF- 119
LGK LH V KL S AL+ +Y + + D ++F + D ++W+ +++GF
Sbjct: 186 LGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 120 -------ACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYV 172
A SH+ + +F+ PN L AC+ L G +H
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFH---------PNEYIFGSSLKACSSLLRPDYGSQIHGLC 296
Query: 173 IKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAF 232
IK L + + G SL MYA+ G ++ A VFD IE D SWN +I+GL+ N +A
Sbjct: 297 IKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAV 356
Query: 233 RLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNAL 292
+FS M + P+ ++ ++L CA + + G +IH Y+++ +AD++VCN+L
Sbjct: 357 SVFSQMRSSGFIPDAISLRSLL--CAQ-TKPMALSQGMQIHSYIIKWG-FLADLTVCNSL 412
Query: 293 VSFYLRFGRTEEAELLFRRMKSR-DLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWP 351
++ Y LF ++ D VSWN I+ +++ ++ L LF ++ E P
Sbjct: 413 LTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE-CEP 471
Query: 352 DSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRT 411
D +T+ +LL C + +LK+G ++H Y L+ L + + N L+ YAKC + A R
Sbjct: 472 DHITMGNLLRGCVEISSLKLGSQVHCYSLK-TGLAPEQFIKNGLIDMYAKCGSLGQARRI 530
Query: 412 FLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLRE 471
F + RD++SW++++ +++SG+ + L L M GI P+ +T + ++ C+ V
Sbjct: 531 FDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHV--- 587
Query: 472 GMVKE 476
G+V+E
Sbjct: 588 GLVEE 592
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 164/331 (49%), Gaps = 15/331 (4%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
+ P+ SW II G +G EA+S+F+ +++SS + L S + +A +
Sbjct: 331 IERPDTASWNVIIAGLANNGYADEAVSVFS-QMRSSGFIPDAISLRSLLCAQTKPMA-LS 388
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQV-DNTDPVTWNILLSGF 119
G +H Y+ K G ++ V +LL +Y C + C+ LF +N D V+WN +L+
Sbjct: 389 QGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILT-- 446
Query: 120 AC-SHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLE 178
AC H ++ LF M V + +P+ +T+ +L C + + G +H Y +K GL
Sbjct: 447 ACLQHEQPVEMLRLFKLMLV-SECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLA 505
Query: 179 RHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWM 238
+ N L MYAK G + A +FDS++++DVVSW+ +I G +++ +A LF M
Sbjct: 506 PEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEM 565
Query: 239 LTEPIKPNYATILNILPICA--SLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFY 296
+ I+PN+ T + +L C+ L E+ G +++ + + C+ +V
Sbjct: 566 KSAGIEPNHVTFVGVLTACSHVGLVEE-----GLKLYATMQTEHGISPTKEHCSCVVDLL 620
Query: 297 LRFGRTEEAELLFRRMK-SRDLVSWNAIIAG 326
R GR EAE MK D+V W +++
Sbjct: 621 ARAGRLNEAERFIDEMKLEPDVVVWKTLLSA 651
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust.
Identities = 259/840 (30%), Positives = 428/840 (50%), Gaps = 61/840 (7%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFA--HELQSSPSVRHNHQLFSAVLKSCTSLAD 58
+ +P+ S +I+G+ + L +E+L F+ H L N + +V+ +C++L
Sbjct: 110 IPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFL----GFEANEISYGSVISACSALQA 165
Query: 59 ILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSG 118
L + + + K+G+ + V AL+++++K +D YK+F + + WN +++G
Sbjct: 166 PLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAG 225
Query: 119 FACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLE 178
A + + V +LF+ M V Q KP+S T + VL+ACA L + GK + A VIK G E
Sbjct: 226 -ALRNQNYGAVFDLFHEMCVGFQ-KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE 283
Query: 179 RHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWM 238
V ++ +YAK G + +A VF I + VVSW ++SG +++ A +F M
Sbjct: 284 -DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM 342
Query: 239 LTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLR 298
++ N T+ +++ C ++H +V + D SV AL+S Y +
Sbjct: 343 RHSGVEINNCTVTSVISACGRPSMVCE---ASQVHAWVFKSG-FYLDSSVAAALISMYSK 398
Query: 299 FGRTEEAELLFRRM---KSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVT 355
G + +E +F + + +++V N +I ++ + + KA+ LF ++ +E + D +
Sbjct: 399 SGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRML-QEGLRTDEFS 455
Query: 356 LVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMI 415
+ SLL + L L +GK++HGY L+ L D VG++L + Y+KC +E +Y+ F I
Sbjct: 456 VCSLL---SVLDCLNLGKQVHGYTLKSG-LVLDLTVGSSLFTLYSKCGSLEESYKLFQGI 511
Query: 416 CRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVK 475
+D W SM+ F+E GY + + L + ML +G PD T+ ++ C++ K
Sbjct: 512 PFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGK 571
Query: 476 ETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGY 535
E HGY ++ G+ D ++G+A+++ Y+KC ++K A V+ L E + V+ + +ISGY
Sbjct: 572 EIHGYTLRAGI---DKGMDLGSALVNMYSKCGSLKLARQVYDRLPE-LDPVSCSSLISGY 627
Query: 536 ANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIM 595
+ G + F+ F RD+ G D+ I
Sbjct: 628 SQHGLIQDGFLLF-----RDMV--------------------------MSGFTMDSFAIS 656
Query: 596 SLLPVCSQMASVHLLRQCHGYVIRA--CFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQ 653
S+L + L Q H Y+ + C + + +LL +Y+K GSI K F
Sbjct: 657 SILKAAALSDESSLGAQVHAYITKIGLCTEP-SVGSSLLTMYSKFGSIDDCCKAFSQING 715
Query: 654 KDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEI 713
D++ TA+I YA HG AL+V++ M E G PD V VLSACSH GLV+E
Sbjct: 716 PDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFH 775
Query: 714 FRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHH 773
S+ K GI+P Y +VD L R G++ +A S +N M ++ D VWGTLL AC+IH
Sbjct: 776 LNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHG 835
Query: 774 EVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWI 833
EVELG+V A + E+E + G Y+ +SN+ A WD V E RKLMK ++K S +
Sbjct: 836 EVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 196/718 (27%), Positives = 352/718 (49%), Gaps = 67/718 (9%)
Query: 80 VSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVR 139
++K+LL+ Y+ G + D KLF + D V+ NI++SG+ H + F MH
Sbjct: 86 LTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYK-QHRLFEESLRFFSKMHFL 144
Query: 140 DQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHD 199
+ N ++ V+SAC+ L + + + IK G + +V ++L +++K D
Sbjct: 145 GF-EANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED 203
Query: 200 AYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICAS 259
AY VF +V WN +I+G N+ G F LF M KP+ T ++L CAS
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 260 LDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVS 319
L++ FG+ + V++ DV VC A+V Y + G EA +F R+ + +VS
Sbjct: 264 LEK---LRFGKVVQARVIKCGA--EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS 318
Query: 320 WNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYF 379
W +++GY +++ AL +F E+ + ++ T+ S++ AC + ++H +
Sbjct: 319 WTVMLSGYTKSNDAFSALEIFKEM-RHSGVEINNCTVTSVISACGRPSMVCEASQVHAWV 377
Query: 380 LRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFL---MICRRDLISWNSMLDAFSESGYN 436
+ + D++V AL+S Y+K D++ + + F I R++++ N M+ +FS+S
Sbjct: 378 FKSGFY-LDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKP 434
Query: 437 SQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIG 496
+ + L ML EG+R D ++ +++ + + K+ HGY +K+GL+L T +G
Sbjct: 435 GKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCL---NLGKQVHGYTLKSGLVLDLT---VG 488
Query: 497 NAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDL 556
+++ Y+KC +++ ++ +FQ + K N
Sbjct: 489 SSLFTLYSKCGSLEESYKLFQGIPFKDNAC------------------------------ 518
Query: 557 TPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGY 616
W MI + E + +A+ LF ++ G PD T+ ++L VCS S+ ++ HGY
Sbjct: 519 --WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGY 576
Query: 617 VIRACFD-GVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAA 675
+RA D G+ L AL+++Y+KCGS+ A +++ P+ D V +++I GY+ HG+ +
Sbjct: 577 TLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDG 636
Query: 676 LKVFSDMLELGVNPDHVVITAVLSACSHAGLVDE---GLEIFRSIEKVQGIKPTPEQYAS 732
+F DM+ G D I+++L A A L DE G ++ I K+ G+ P +S
Sbjct: 637 FLLFRDMVMSGFTMDSFAISSILKA---AALSDESSLGAQVHAYITKI-GLCTEPSVGSS 692
Query: 733 LVDLLARGGQISD---AYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFE 787
L+ + ++ G I D A+S +N D W L+ + H + V N + E
Sbjct: 693 LLTMYSKFGSIDDCCKAFSQING----PDLIAWTALIASYAQHGKANEALQVYNLMKE 746
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/502 (21%), Positives = 224/502 (44%), Gaps = 51/502 (10%)
Query: 272 IHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASND 331
+ ++LRR L DV + +L+S+Y G +A LF + D+VS N +I+GY +
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 332 EWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAV 391
+ ++L F ++ + ++ S++ AC+ L+ + + + ++ Y + V
Sbjct: 130 LFEESLRFFSKMHFLG-FEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYE-VV 187
Query: 392 GNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSML-DAFSESGYNSQFLNLLNCMLMEG 450
+AL+ ++K E AY+ F ++ WN+++ A Y + F +L + M +
Sbjct: 188 ESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF-DLFHEMCVGF 246
Query: 451 IRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIK 510
+PDS T +++ C ++ + K +IK G + + AI+D YAKC ++
Sbjct: 247 QKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGA----EDVFVCTAIVDLYAKCGHMA 302
Query: 511 YAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAEND 570
A V FSRI + W +M+ Y +++
Sbjct: 303 EAMEV--------------------------------FSRIPNPSVVSWTVMLSGYTKSN 330
Query: 571 FPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFD-GVRLNG 629
AL +F +++ G++ + T+ S++ C + + V Q H +V ++ F +
Sbjct: 331 DAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAA 390
Query: 630 ALLHLYAKCGSIFSASKIFQ-CHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVN 688
AL+ +Y+K G I + ++F+ + ++ MI ++ A+++F+ ML+ G+
Sbjct: 391 ALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Query: 689 PDHVVITAVLSA--CSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDA 746
D + ++LS C + G G + G+ +SL L ++ G + ++
Sbjct: 451 TDEFSVCSLLSVLDCLNLGKQVHGYTL------KSGLVLDLTVGSSLFTLYSKCGSLEES 504
Query: 747 YSLVNRMPVEADCNVWGTLLGA 768
Y L +P + D W +++
Sbjct: 505 YKLFQGIPFK-DNACWASMISG 525
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 160/378 (42%), Gaps = 36/378 (9%)
Query: 366 LKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNS 425
L NL+ K + + LR L D + +L+S+Y+ M A + F I + D++S N
Sbjct: 61 LCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNI 120
Query: 426 MLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTG 485
M+ + + + L + M G + I+ ++I C+ + + + IK G
Sbjct: 121 MISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMG 180
Query: 486 LLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAF 545
+ + +A++D ++K + A+ VF+ L
Sbjct: 181 YFFYEV---VESALIDVFSKNLRFEDAYKVFRDSLS------------------------ 213
Query: 546 MTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMA 605
+ +Y WN +I N LF ++ KPD+ T S+L C+ +
Sbjct: 214 ---ANVYC-----WNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLE 265
Query: 606 SVHLLRQCHGYVIRACFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGG 665
+ + VI+ + V + A++ LYAKCG + A ++F P VV T M+ G
Sbjct: 266 KLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSG 325
Query: 666 YAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKP 725
Y +AL++F +M GV ++ +T+V+SAC +V E ++ + K G
Sbjct: 326 YTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFK-SGFYL 384
Query: 726 TPEQYASLVDLLARGGQI 743
A+L+ + ++ G I
Sbjct: 385 DSSVAAALISMYSKSGDI 402
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 121/284 (42%), Gaps = 56/284 (19%)
Query: 602 SQMASVHLLRQCHGYVIRACFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTA 661
+++ HLLR+ Y++ FD V L +LL Y+ GS+ A+K+F PQ DVV
Sbjct: 67 TKILQAHLLRR---YLLP--FD-VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNI 120
Query: 662 MIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACS--HAGLVDEGLEIFRSIEK 719
MI GY H + + +L+ FS M LG + + +V+SACS A L E L +I+
Sbjct: 121 MISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSE-LVCCHTIKM 179
Query: 720 VQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTL-------------- 765
E ++L+D+ ++ + DAY V R + A+ W T+
Sbjct: 180 GYFFYEVVE--SALIDVFSKNLRFEDAYK-VFRDSLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 766 ---------------------LGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYA 804
L AC ++ G+VV R+ + A+++ + +LYA
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYA 296
Query: 805 ADARWDGVVEIRKLMKTRDLKKPAACSWIEV----ERKNNAFMA 844
+E+ + P+ SW + + N+AF A
Sbjct: 297 KCGHMAEAMEV-----FSRIPNPSVVSWTVMLSGYTKSNDAFSA 335
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 232/826 (28%), Positives = 421/826 (50%), Gaps = 49/826 (5%)
Query: 46 FSAVLKSCTSLADILLGKALHGYVTKLGHISCQAVS-KALLNLYAKCGVIDDCYKLFGQV 104
+ + +SC+SL L LH ++ G + + L+ YA G D +F
Sbjct: 4 YMPLFRSCSSLR---LVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 60
Query: 105 DNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACA-RLGGIF 163
D + +L+ H+ DA + +L++ + V + + + VL ACA +
Sbjct: 61 PYPDSFMYGVLIKCNVWCHLLDAAI-DLYHRL-VSETTQISKFVFPSVLRACAGSREHLS 118
Query: 164 AGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLS 223
G +H +IK G++ ++ SL MY + G + DA VFD + +D+V+W+ ++S
Sbjct: 119 VGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL 178
Query: 224 ENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELI 283
EN + A R+F M+ + ++P+ T+++++ CA L R +H + R+
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG---CLRIARSVHGQITRKM-FD 234
Query: 284 ADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCEL 343
D ++CN+L++ Y + G +E +F ++ ++ VSW A+I+ Y + KAL F E+
Sbjct: 235 LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 344 ITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCS 403
I K I P+ VTL S+L +C + ++ GK +HG+ +R ++ ALV YA+C
Sbjct: 295 I-KSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECG 353
Query: 404 DMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIH 463
+ ++ R++++WNS++ ++ G Q L L M+ + I+PD+ T+ + I
Sbjct: 354 KLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSIS 413
Query: 464 FCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKR 523
C + K+ HG++I+T + ++ + N+++D Y+K
Sbjct: 414 ACENAGLVPLGKQIHGHVIRTDV----SDEFVQNSLIDMYSKS----------------- 452
Query: 524 NLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQ 583
GS D A F++I R + WN M+ +++N +A+SLF +
Sbjct: 453 ---------------GSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMY 497
Query: 584 AQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDGVRLNGALLHLYAKCGSIFS 643
++ + VT ++++ CS + S+ + H +I + + + AL+ +YAKCG + +
Sbjct: 498 HSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNA 557
Query: 644 ASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSH 703
A +F+ + +V ++MI Y MHG +A+ F+ M+E G P+ VV VLSAC H
Sbjct: 558 AETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGH 617
Query: 704 AGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWG 763
+G V+EG F ++ K G+ P E +A +DLL+R G + +AY + MP AD +VWG
Sbjct: 618 SGSVEEGKYYF-NLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWG 676
Query: 764 TLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRD 823
+L+ CRIH ++++ + + N L ++ D+ G Y ++SN+YA + W+ +R MK+ +
Sbjct: 677 SLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSN 736
Query: 824 LKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIKDQ 869
LKK S IE+++K F AG+ + + D IY L L ++
Sbjct: 737 LKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEE 782
Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 159/568 (27%), Positives = 278/568 (48%), Gaps = 51/568 (8%)
Query: 45 LFSAVLKSCT-SLADILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQ 103
+F +VL++C S + +G +HG + K G + +LL +Y + G + D K+F
Sbjct: 102 VFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDG 161
Query: 104 VDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIF 163
+ D V W+ L+S + + + + +F M V D +P++VT+ V+ CA LG +
Sbjct: 162 MPVRDLVAWSTLVSS-CLENGEVVKALRMFKCM-VDDGVEPDAVTMISVVEGCAELGCLR 219
Query: 164 AGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLS 223
+S+H + + + + NSL +MY+K G + + +F+ I K+ VSW A+IS +
Sbjct: 220 IARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYN 279
Query: 224 ENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFF-GREIHCYVLRRAEL 282
+ A R FS M+ I+PN T+ ++L C +G G+ +H + +RR
Sbjct: 280 RGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGL----IGLIREGKSVHGFAVRRELD 335
Query: 283 IADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCE 342
S+ ALV Y G+ + E + R + R++V+WN++I+ YA ++AL LF +
Sbjct: 336 PNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQ 395
Query: 343 LITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKC 402
++T+ I PD+ TL S + AC + +GK+IHG+ +R D V N+L+ Y+K
Sbjct: 396 MVTQR-IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV--SDEFVQNSLIDMYSKS 452
Query: 403 SDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTII 462
+++A F I R +++WNSML FS++G + + ++L + M + + +T L +I
Sbjct: 453 GSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVI 512
Query: 463 HFCTTVLREGMVKETHGYLIKTGL--LLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLL 520
C+++ K H LI +GL L DT A++D YAKC ++ A VF+++
Sbjct: 513 QACSSIGSLEKGKWVHHKLIISGLKDLFTDT------ALIDMYAKCGDLNAAETVFRAMS 566
Query: 521 EKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFL 580
+ + + MI Y + A+S F
Sbjct: 567 SRSIVSW--------------------------------SSMINAYGMHGRIGSAISTFN 594
Query: 581 KLQAQGMKPDAVTIMSLLPVCSQMASVH 608
++ G KP+ V M++L C SV
Sbjct: 595 QMVESGTKPNEVVFMNVLSACGHSGSVE 622
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 272/516 (52%), Gaps = 22/516 (4%)
Query: 8 SWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHG 67
+W T+++ +G +AL +F + V + +V++ C L + + +++HG
Sbjct: 169 AWSTLVSSCLENGEVVKALRMF--KCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHG 226
Query: 68 YVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDA 127
+T+ + + +LL +Y+KCG + ++F ++ + V+W ++S + +
Sbjct: 227 QITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSE- 285
Query: 128 RVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLE-RHTLVGNS 186
+ + F M ++ +PN VT+ VLS+C +G I GKS+H + ++ L+ + + +
Sbjct: 286 KALRSFSEM-IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLA 344
Query: 187 LTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPN 246
L +YA+ G + D +V + D+++V+WN++IS + ++ A LF M+T+ IKP+
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPD 404
Query: 247 YATILNILPICASLDEDVGYF-FGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEA 305
T+ + + C E+ G G++IH +V+R ++D V N+L+ Y + G + A
Sbjct: 405 AFTLASSISAC----ENAGLVPLGKQIHGHVIRTD--VSDEFVQNSLIDMYSKSGSVDSA 458
Query: 306 ELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAY 365
+F ++K R +V+WN+++ G++ N ++A++LF + + + + VT ++++ AC+
Sbjct: 459 STVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLF-DYMYHSYLEMNEVTFLAVIQACSS 517
Query: 366 LKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNS 425
+ +L+ GK +H + +D AL+ YAKC D+ AA F + R ++SW+S
Sbjct: 518 IGSLEKGKWVHHKLIISGL--KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSS 575
Query: 426 MLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGY--LIK 483
M++A+ G ++ N M+ G +P+ + + ++ C G V+E Y L+K
Sbjct: 576 MINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACG---HSGSVEEGKYYFNLMK 632
Query: 484 TGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSL 519
+ + ++EH +D ++ ++K A+ + +
Sbjct: 633 SFGVSPNSEHFA--CFIDLLSRSGDLKEAYRTIKEM 666
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 223/434 (51%), Gaps = 20/434 (4%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
+A+ NA SW +I+ + R ++AL F+ ++S + N +VL SC + I
Sbjct: 263 IAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG--IEPNLVTLYSVLSSCGLIGLIR 320
Query: 61 LGKALHGY-VTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGF 119
GK++HG+ V + + +++S AL+ LYA+CG + DC + V + + V WN L+S +
Sbjct: 321 EGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLY 380
Query: 120 ACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLER 179
A + + + LF M V + KP++ T+A +SAC G + GK +H +VI+ +
Sbjct: 381 AHRGMV-IQALGLFRQM-VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSD 438
Query: 180 HTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWML 239
V NSL MY+K G V A +VF+ I+ + VV+WN+++ G S+N +A LF +M
Sbjct: 439 E-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMY 497
Query: 240 TEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRF 299
++ N T L ++ C+S+ G+ +H ++ + D+ AL+ Y +
Sbjct: 498 HSYLEMNEVTFLAVIQACSSIGS---LEKGKWVHHKLIISG--LKDLFTDTALIDMYAKC 552
Query: 300 GRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSL 359
G AE +FR M SR +VSW+++I Y + A++ F +++ + P+ V +++
Sbjct: 553 GDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMV-ESGTKPNEVVFMNV 611
Query: 360 LPACAYLKNLKVGK---EIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFL-MI 415
L AC + +++ GK + F P E A + ++ D++ AYRT M
Sbjct: 612 LSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFA----CFIDLLSRSGDLKEAYRTIKEMP 667
Query: 416 CRRDLISWNSMLDA 429
D W S+++
Sbjct: 668 FLADASVWGSLVNG 681
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 253/882 (28%), Positives = 421/882 (47%), Gaps = 95/882 (10%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
+ +PN W + +G+ + GL +EA+ +F E R +H F V+
Sbjct: 221 IVDPNTVCWTCLFSGYVKAGLPEEAVLVF--ERMRDEGHRPDHLAFVTVI---------- 268
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
N Y + G + D LFG++ + D V WN+++SG
Sbjct: 269 -------------------------NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHG 303
Query: 121 ---CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGL 177
C V + F+NM + K T+ VLSA + + G +HA IK GL
Sbjct: 304 KRGCETV----AIEYFFNMR-KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL 358
Query: 178 ERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSW 237
+ VG+SL SMY+K + A VF+++E+K+ V WNA+I G + N LF
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMD 418
Query: 238 MLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYL 297
M + + T ++L CA+ + G + H ++++ +L ++ V NALV Y
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHD---LEMGSQFHSIIIKK-KLAKNLFVGNALVDMYA 474
Query: 298 RFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEM----IWPDS 353
+ G E+A +F RM RD V+WN II Y ++ +A +LF K M I D
Sbjct: 475 KCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF-----KRMNLCGIVSDG 529
Query: 354 VTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFL 413
L S L AC ++ L GK++H ++ L+ D G++L+ Y+KC ++ A + F
Sbjct: 530 ACLASTLKACTHVHGLYQGKQVHCLSVKCG-LDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 414 MICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGM 473
+ ++S N+++ +S++ + L ML G+ P IT TI+ C +
Sbjct: 589 SLPEWSVVSMNALIAGYSQNNLEEAVV-LFQEMLTRGVNPSEITFATIVEACHKPESLTL 647
Query: 474 VKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVIS 533
+ HG + K G +G ++L Y R + A +F L +++V + ++S
Sbjct: 648 GTQFHGQITKRGF--SSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMS 705
Query: 534 GYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVT 593
G++ +N F +AL + +++ G+ PD T
Sbjct: 706 GHS-------------------------------QNGFYEEALKFYKEMRHDGVLPDQAT 734
Query: 594 IMSLLPVCSQMASVHLLRQCHGYVIRACFDGVRL-NGALLHLYAKCGSIFSASKIF-QCH 651
+++L VCS ++S+ R H + D L + L+ +YAKCG + +S++F +
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 794
Query: 652 PQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGL 711
+ +VV ++I GYA +G + ALK+F M + + PD + VL+ACSHAG V +G
Sbjct: 795 RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGR 854
Query: 712 EIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRI 771
+IF + GI+ + A +VDLL R G + +A + ++ D +W +LLGACRI
Sbjct: 855 KIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRI 914
Query: 772 HHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACS 831
H + G + A +L E+E N YV++SN+YA+ W+ +RK+M+ R +KK S
Sbjct: 915 HGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYS 974
Query: 832 WIEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIKDQVTIS 873
WI+VE++ + F AGD SH I L L + +KD ++
Sbjct: 975 WIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVVN 1016
Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 189/710 (26%), Positives = 326/710 (45%), Gaps = 83/710 (11%)
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
+GKA+H LG S + A+++LYAKC + K F ++ D WN +LS ++
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMYS 136
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
S +V+ F ++ +Q PN T +IVLS CAR + G+ +H +IK GLER+
Sbjct: 137 -SIGKPGKVLRSFVSL-FENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT 240
+ G +L MYAK + DA VF+ I D + V W + SG + + +A +F M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 241 EPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFG 300
E +P++ +A V+V N Y+R G
Sbjct: 255 EGHRPDH-----------------------------------LAFVTVINT----YIRLG 275
Query: 301 RTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLL 360
+ ++A LLF M S D+V+WN +I+G+ A+ F + K + TL S+L
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM-RKSSVKSTRSTLGSVL 334
Query: 361 PACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDL 420
A + NL +G +H ++ L + VG++LVS Y+KC MEAA + F + ++
Sbjct: 335 SAIGIVANLDLGLVVHAEAIKLG-LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 421 ISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGY 480
+ WN+M+ ++ +G + + + L M G D T +++ C M + H
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 481 LIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGS 540
+IK L +GNA++D YAKC ++ A +F+ + ++ N VT+N +I Y
Sbjct: 454 IIKKKLA---KNLFVGNALVDMYAKCGALEDARQIFERMCDRDN-VTWNTIIGSY----- 504
Query: 541 ADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPV 600
V EN+ ++A LF ++ G+ D + S L
Sbjct: 505 ------------------------VQDENE--SEAFDLFKRMNLCGIVSDGACLASTLKA 538
Query: 601 CSQMASVHLLRQCHGYVIRACFD-GVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVML 659
C+ + ++ +Q H ++ D + +L+ +Y+KCG I A K+F P+ VV +
Sbjct: 539 CTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM 598
Query: 660 TAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEK 719
A+I GY+ + + +A + +F +ML GVNP + ++ AC + G + I K
Sbjct: 599 NALIAGYSQNNLEEAVV-LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITK 657
Query: 720 VQGIKPTPEQYA-SLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGA 768
+G E SL+ + +++A +L + + +W ++
Sbjct: 658 -RGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG 706
Score = 97.1 bits (240), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 161/377 (42%), Gaps = 71/377 (18%)
Query: 486 LLLG-DTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEA 544
L+LG D+E +GNAI+D YAKC + YA F LEK
Sbjct: 87 LILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEK---------------------- 123
Query: 545 FMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQM 604
D+T WN M+ +Y+ P + L F+ L + P+ T +L C++
Sbjct: 124 ----------DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARE 173
Query: 605 ASVHLLRQCHGYVIRACFDGVRLN----GALLHLYAKCGSIFSASKIFQCHPQKDVVMLT 660
+V RQ H +I+ G+ N GAL+ +YAKC I A ++F+ + V T
Sbjct: 174 TNVEFGRQIHCSMIKM---GLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWT 230
Query: 661 AMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKV 720
+ GY G+ + A+ VF M + G PDH+ V++ G + + +F
Sbjct: 231 CLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF------ 284
Query: 721 QGIKPTPEQYASLVDLLARGGQISDAYSL-----VNRMPVEADCNVWGTLLGACRIHHEV 775
G +P+ A V + G + + ++ + + V++ + G++L A I +
Sbjct: 285 -GEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANL 343
Query: 776 ELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEV 835
+LG VV EA +G + SN+Y + + K+ + AA + +
Sbjct: 344 DLGLVV-----HAEAIKLG---LASNIYVGSSLVSMYSKCEKM-------EAAAKVFEAL 388
Query: 836 ERKNNAF---MAGDYSH 849
E KN+ F M Y+H
Sbjct: 389 EEKNDVFWNAMIRGYAH 405
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 136/343 (39%), Gaps = 71/343 (20%)
Query: 369 LKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLD 428
L++GK +H L ++ + +GNA+V YAKC+ + A + F + +D+ +WNSML
Sbjct: 76 LRIGKAVHSKSLILG-IDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 429 AFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLL 488
+S G + L + I P+ T ++ C ++ H +IK GL
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL-- 191
Query: 489 GDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTF 548
+ G A++D YAKC I A VF+ +++ N V + + SGY G
Sbjct: 192 -ERNSYCGGALVDMYAKCDRISDARRVFEWIVDP-NTVCWTCLFSGYVKAG--------- 240
Query: 549 SRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVH 608
P +A+ +F +++ +G +PD + ++
Sbjct: 241 ----------------------LPEEAVLVFERMRDEGHRPDHLAFVT------------ 266
Query: 609 LLRQCHGYVIRACFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAM 668
+++ Y + G + A +F DVV MI G+
Sbjct: 267 ----------------------VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGK 304
Query: 669 HGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGL 711
G A++ F +M + V + +VLSA +D GL
Sbjct: 305 RGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/680 (33%), Positives = 361/680 (53%), Gaps = 53/680 (7%)
Query: 166 KSLHAYVIKFG-LERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSE 224
K+LH +VI G + H L ++L+ YA G + A +F+ + ++S+N VI
Sbjct: 35 KALHCHVITGGRVSGHIL--STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVR 92
Query: 225 NKVLGDAFRLFSWMLTEPIK--PNYATILNILPICASLDEDVGYF-FGREIHCYVLRRAE 281
+ DA +F M++E +K P+ T P A ++ G +H +LR +
Sbjct: 93 EGLYHDAISVFIRMVSEGVKCVPDGYT----YPFVAKAAGELKSMKLGLVVHGRILR-SW 147
Query: 282 LIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFC 341
D V NAL++ Y+ FG+ E A +F MK+RD++SWN +I+GY N AL +F
Sbjct: 148 FGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMF- 206
Query: 342 ELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAK 401
+ + E + D T+VS+LP C +LK+L++G+ +H + L + V NALV+ Y K
Sbjct: 207 DWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK-LVEEKRLGDKIEVKNALVNMYLK 265
Query: 402 CSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTI 461
C M+ A F + RRD+I+W M++ ++E G L L M EG+RP+++TI ++
Sbjct: 266 CGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASL 325
Query: 462 IHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLE 521
+ C L+ K HG+ ++ V+ ++
Sbjct: 326 VSVCGDALKVNDGKCLHGWAVRQ-----------------------------QVYSDIII 356
Query: 522 KRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLK 581
+ +L IS YA C D F FS PW+ +I +N+ + AL LF +
Sbjct: 357 ETSL------ISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKR 410
Query: 582 LQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACF-DGVRLNGALLHLYAKCGS 640
++ + ++P+ T+ SLLP + +A + H Y+ + F + L+H+Y+KCG+
Sbjct: 411 MRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGT 470
Query: 641 IFSASKIF----QCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITA 696
+ SA KIF + H KDVV+ A+I GY MHG G AL+VF +M+ GV P+ + T+
Sbjct: 471 LESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTS 530
Query: 697 VLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVE 756
L+ACSH+GLV+EGL +FR + + Y +VDLL R G++ +AY+L+ +P E
Sbjct: 531 ALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFE 590
Query: 757 ADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIR 816
VWG LL AC H V+LG + AN+LFE+E +N GNYV+++N+YAA RW + ++R
Sbjct: 591 PTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVR 650
Query: 817 KLMKTRDLKKPAACSWIEVE 836
+M+ L+K S IE+
Sbjct: 651 SMMENVGLRKKPGHSTIEIR 670
Score = 226 bits (576), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 184/670 (27%), Positives = 321/670 (47%), Gaps = 41/670 (6%)
Query: 46 FSAVLKSCTSLADILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVD 105
+ ++L + I KALH +V G +S +S L YA CG I KLF ++
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHILS-TLSVTYALCGHITYARKLFEEMP 76
Query: 106 NTDPVTWNILLSGFACSHV-DDARVMNLFYNMHVRDQPK--PNSVTVAIVLSACARLGGI 162
+ +++NI++ + + DA +++F M V + K P+ T V A L +
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDA--ISVFIRM-VSEGVKCVPDGYTYPFVAKAAGELKSM 133
Query: 163 FAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGL 222
G +H +++ R V N+L +MY G V A VFD ++++DV+SWN +ISG
Sbjct: 134 KLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGY 193
Query: 223 SENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAEL 282
N + DA +F WM+ E + ++ATI+++LP+C L + GR +H V + L
Sbjct: 194 YRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKD---LEMGRNVHKLVEEK-RL 249
Query: 283 IADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCE 342
+ V NALV+ YL+ GR +EA +F RM+ RD+++W +I GY + + AL L C
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALEL-CR 308
Query: 343 LITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKC 402
L+ E + P++VT+ SL+ C + GK +HG+ +R + D + +L+S YAKC
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ-VYSDIIIETSLISMYAKC 367
Query: 403 SDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTII 462
++ +R F + W++++ ++ S L L M E + P+ T+ +++
Sbjct: 368 KRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLL 427
Query: 463 --HFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLL 520
+ LR+ M H YL KTG + + + ++ Y+KC ++ A +F +
Sbjct: 428 PAYAALADLRQAM--NIHCYLTKTGFM---SSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 521 EK---RNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTP----WNLMIRVYAENDFPN 573
EK +++V + +ISGY G A F + +TP + + + +
Sbjct: 483 EKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVE 542
Query: 574 QALSLFLKLQAQGMKPDAVT-----IMSLLPVCSQMASVHLLRQCHGYVIRACFDGVRLN 628
+ L+LF + + K A + I+ LL ++ + L + + G L
Sbjct: 543 EGLTLF-RFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLA 601
Query: 629 GALLHLYAKCGSIFSASKIFQCHPQK--DVVMLTAMIGGYAMHGMGKAALKVFSDMLELG 686
+ H + G + +A+K+F+ P+ + V+L + YA G K KV S M +G
Sbjct: 602 ACVTHENVQLGEM-AANKLFELEPENTGNYVLLANI---YAALGRWKDMEKVRSMMENVG 657
Query: 687 V--NPDHVVI 694
+ P H I
Sbjct: 658 LRKKPGHSTI 667
Score = 186 bits (472), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 244/482 (50%), Gaps = 19/482 (3%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M + + S+ +I + R+GL+ +A+S+F + + + V K+ L +
Sbjct: 75 MPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSG-F 119
LG +HG + + + V ALL +Y G ++ +F + N D ++WN ++SG +
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 120 ACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLER 179
+++DA +M ++ V + + T+ +L C L + G+++H V + L
Sbjct: 195 RNGYMNDALMM---FDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGD 251
Query: 180 HTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWML 239
V N+L +MY K G + +A VFD +E +DV++W +I+G +E+ + +A L M
Sbjct: 252 KIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQ 311
Query: 240 TEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRF 299
E ++PN TI +++ +C + + G+ +H + +R+ ++ +D+ + +L+S Y +
Sbjct: 312 FEGVRPNAVTIASLVSVCG---DALKVNDGKCLHGWAVRQ-QVYSDIIIETSLISMYAKC 367
Query: 300 GRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSL 359
R + +F W+AIIAG N+ AL LF + + +E + P+ TL SL
Sbjct: 368 KRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLF-KRMRREDVEPNIATLNSL 426
Query: 360 LPACAYLKNLKVGKEIHGYFLRHPYLEE-DAAVGNALVSFYAKCSDMEAAYRTFLMICR- 417
LPA A L +L+ IH Y + ++ DAA G LV Y+KC +E+A++ F I
Sbjct: 427 LPAYAALADLRQAMNIHCYLTKTGFMSSLDAATG--LVHVYSKCGTLESAHKIFNGIQEK 484
Query: 418 ---RDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMV 474
+D++ W +++ + G L + M+ G+ P+ IT + ++ C+ G+V
Sbjct: 485 HKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACS---HSGLV 541
Query: 475 KE 476
+E
Sbjct: 542 EE 543
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/701 (33%), Positives = 359/701 (51%), Gaps = 45/701 (6%)
Query: 166 KSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDK-DVVSWNAVISGLSE 224
K +H ++ GL R ++ SL ++Y A VF++ + + DV WN+++SG S+
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 225 NKVLGDAFRLFSWMLTEPI-KPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELI 283
N + D +F +L I P+ T N++ +L + F GR IH V++ +
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGRE---FLGRMIHTLVVKSG-YV 139
Query: 284 ADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCEL 343
DV V ++LV Y +F E + +F M RD+ SWN +I+ + + E KAL LF +
Sbjct: 140 CDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRM 199
Query: 344 ITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCS 403
P+SV+L + AC+ L L+ GKEIH ++ + E D V +ALV Y KC
Sbjct: 200 -ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGF-ELDEYVNSALVDMYGKCD 257
Query: 404 DMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIH 463
+E A F + R+ L++WNSM+ + G + + +LN M++EG RP T+ +I+
Sbjct: 258 CLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILM 317
Query: 464 FCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKR 523
C+ K HGY+I++ + NA D Y C
Sbjct: 318 ACSRSRNLLHGKFIHGYVIRS----------VVNA--DIYVNC----------------- 348
Query: 524 NLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQ 583
+I Y CG A+ A FS+ WN+MI Y +A+ ++ ++
Sbjct: 349 ------SLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMV 402
Query: 584 AQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDGVRLN-GALLHLYAKCGSIF 642
+ G+KPD VT S+LP CSQ+A++ +Q H + + + L ALL +Y+KCG+
Sbjct: 403 SVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEK 462
Query: 643 SASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACS 702
A +IF P+KDVV T MI Y HG + AL F +M + G+ PD V + AVLSAC
Sbjct: 463 EAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACG 522
Query: 703 HAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEAD-CNV 761
HAGL+DEGL+ F + GI+P E Y+ ++D+L R G++ +AY ++ + P +D +
Sbjct: 523 HAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAEL 582
Query: 762 WGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKT 821
TL AC +H E LG +A L E D+ Y+V+ NLYA+ WD +R MK
Sbjct: 583 LSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKE 642
Query: 822 RDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSIL 862
L+K CSWIE+ K F A D SH R + +Y L++L
Sbjct: 643 MGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALL 683
Score = 223 bits (567), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 153/587 (26%), Positives = 284/587 (48%), Gaps = 21/587 (3%)
Query: 9 WITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHGY 68
W ++++G+ ++ + + L +F L S V + F V+K+ +L LG+ +H
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFT-FPNVIKAYGALGREFLGRMIHTL 132
Query: 69 VTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDAR 128
V K G++ V+ +L+ +YAK + ++ ++F ++ D +WN ++S F S + +
Sbjct: 133 VVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG-EAEK 191
Query: 129 VMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLT 188
+ LF M +PNSV++ + +SAC+RL + GK +H +K G E V ++L
Sbjct: 192 ALELFGRME-SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALV 250
Query: 189 SMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYA 248
MY K + A VF + K +V+WN++I G + + M+ E +P+
Sbjct: 251 DMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQT 310
Query: 249 TILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELL 308
T+ +IL C+ G+ IH YV+R + AD+ V +L+ Y + G AE +
Sbjct: 311 TLTSILMACS---RSRNLLHGKFIHGYVIRSV-VNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 309 FRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKN 368
F + + SWN +I+ Y S W KA+ ++ ++++ + PD VT S+LPAC+ L
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG-VKPDVVTFTSVLPACSQLAA 425
Query: 369 LKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLD 428
L+ GK+IH + LE D + +AL+ Y+KC + + A+R F I ++D++SW M+
Sbjct: 426 LEKGKQIH-LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484
Query: 429 AFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLL 488
A+ G + L + M G++PD +T+L ++ C G++ E + +
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACG---HAGLIDEGLKFFSQMRSKY 541
Query: 489 GDT---EHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRN----LVTFNPVISGYANCGSA 541
G EH + ++D + + A+ + Q E + L T +
Sbjct: 542 GIEPIIEHY--SCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLG 599
Query: 542 DEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMK 588
D Y D + + ++ +YA + + A + LK++ G++
Sbjct: 600 DRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLR 646
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 159/559 (28%), Positives = 268/559 (47%), Gaps = 50/559 (8%)
Query: 48 AVLKSCT-SLADILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVD- 105
++L+ CT S + K +H + LG + K+L+N+Y C +F D
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 106 NTDPVTWNILLSGFACSHV--DDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIF 163
+D WN L+SG++ + + D V N + P+S T V+ A LG F
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSI---CVPDSFTFPNVIKAYGALGREF 124
Query: 164 AGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLS 223
G+ +H V+K G +V +SL MYAK L ++ VFD + ++DV SWN VIS
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 224 ENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRA-EL 282
++ A LF M + +PN ++ + C+ L + G+EIH +++ EL
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRL---LWLERGKEIHRKCVKKGFEL 241
Query: 283 IADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCE 342
D V +ALV Y + E A +F++M + LV+WN++I GY + + + +
Sbjct: 242 --DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNR 299
Query: 343 LITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKC 402
+I E P TL S+L AC+ +NL GK IHGY +R + D V +L+ Y KC
Sbjct: 300 MII-EGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR-SVVNADIYVNCSLIDLYFKC 357
Query: 403 SDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTII 462
+ A F + SWN M+ ++ G + + + + M+ G++PD +T +++
Sbjct: 358 GEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVL 417
Query: 463 HFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEK 522
C+ + K+ H + ++ L +T+ + +A+LD Y+KC N K AF +F S + K
Sbjct: 418 PACSQLAALEKGKQIHLSISESRL---ETDELLLSALLDMYSKCGNEKEAFRIFNS-IPK 473
Query: 523 RNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKL 582
+++V++ +IS Y + G P +AL F ++
Sbjct: 474 KDVVSWTVMISAYGSHGQ-------------------------------PREALYQFDEM 502
Query: 583 QAQGMKPDAVTIMSLLPVC 601
Q G+KPD VT++++L C
Sbjct: 503 QKFGLKPDGVTLLAVLSAC 521
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 187/390 (47%), Gaps = 13/390 (3%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E + SW T+I+ F + G ++AL LF S N + + +C+ L +
Sbjct: 168 MPERDVASWNTVISCFYQSGEAEKALELFGR--MESSGFEPNSVSLTVAISACSRLLWLE 225
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
GK +H K G + V+ AL+++Y KC ++ ++F ++ V WN ++ G+
Sbjct: 226 RGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYV 285
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
D++ N + + +P+ T+ +L AC+R + GK +H YVI+ +
Sbjct: 286 AK--GDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD 343
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT 240
V SL +Y K G + A +VF + SWN +IS A ++ M++
Sbjct: 344 IYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS 403
Query: 241 EPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFG 300
+KP+ T ++LP C+ L G++IH + + L D + +AL+ Y + G
Sbjct: 404 VGVKPDVVTFTSVLPACSQL---AALEKGKQIHLSI-SESRLETDELLLSALLDMYSKCG 459
Query: 301 RTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLL 360
+EA +F + +D+VSW +I+ Y S+ + +AL F E+ K + PD VTL+++L
Sbjct: 460 NEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM-QKFGLKPDGVTLLAVL 518
Query: 361 PACAYL----KNLKVGKEIHGYFLRHPYLE 386
AC + + LK ++ + P +E
Sbjct: 519 SACGHAGLIDEGLKFFSQMRSKYGIEPIIE 548
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 225/705 (31%), Positives = 374/705 (53%), Gaps = 18/705 (2%)
Query: 166 KSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHD---AYSVFDSIEDKDV-VSWNAVISG 221
K H + K GL+ L + + G A VF++ E +N++I G
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 222 LSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAE 281
+ + + +A LF M+ I P+ T L CA + G +IH +++
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA---KSRAKGNGIQIHGLIVKMG- 164
Query: 282 LIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFC 341
D+ V N+LV FY G + A +F M R++VSW ++I GYA D A++LF
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 342 ELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAK 401
++ E + P+SVT+V ++ ACA L++L+ G++++ F+R+ +E + + +ALV Y K
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA-FIRNSGIEVNDLMVSALVDMYMK 283
Query: 402 CSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTI 461
C+ ++ A R F +L N+M + G + L + N M+ G+RPD I++L+
Sbjct: 284 CNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 462 IHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLE 521
I C+ + K HGY+++ G ++ NI NA++D Y KC AF +F +
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGF---ESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 522 KRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLK 581
K +VT+N +++GY G D A+ TF + +++ WN +I + +A+ +F
Sbjct: 401 K-TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 582 LQAQ-GMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFD-GVRLNGALLHLYAKCG 639
+Q+Q G+ D VT+MS+ C + ++ L + + Y+ + VRL L+ ++++CG
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 640 SIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLS 699
SA IF +DV TA IG AM G + A+++F DM+E G+ PD V L+
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 700 ACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADC 759
ACSH GLV +G EIF S+ K+ G+ P Y +VDLL R G + +A L+ MP+E +
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 760 NVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLM 819
+W +LL ACR+ VE+ A ++ + + G+YV++SN+YA+ RW+ + ++R M
Sbjct: 640 VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 699
Query: 820 KTRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSILDE 864
K + L+KP S I++ K + F +GD SHP I ++LDE
Sbjct: 700 KEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIE---AMLDE 741
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 162/668 (24%), Positives = 294/668 (44%), Gaps = 112/668 (16%)
Query: 112 WNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAY 171
+N L+ G+A S + + ++ LF M + P+ T LSACA+ G +H
Sbjct: 102 YNSLIRGYASSGLCNEAIL-LFLRM-MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 172 VIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDA 231
++K G + V NSL YA+ G + A VFD + +++VVSW ++I G + DA
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 232 FRLFSWML-TEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCN 290
LF M+ E + PN T++ ++ CA L ED+ G +++ ++ + D+ V +
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKL-EDLET--GEKVYAFIRNSGIEVNDLMV-S 275
Query: 291 ALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIW 350
ALV Y++ + A+ LF + +L NA+ + Y +AL +F L+ +
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF-NLMMDSGVR 334
Query: 351 PDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYR 410
PD ++++S + +C+ L+N+ GK HGY LR+ + D + NAL+ Y KC + A+R
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWD-NICNALIDMYMKCHRQDTAFR 393
Query: 411 TFLMICRRDLISWNSMLDAFSESG-------------------YNSQFLNLLNCMLM--- 448
F + + +++WNS++ + E+G +N+ L+ L
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 449 ----------EGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNA 498
EG+ D +T+++I C + + K + Y+ K G+ L + +G
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL---DVRLGTT 510
Query: 499 ILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTP 558
++D +++C + + A ++F SL RD++
Sbjct: 511 LVDMFSRCGDPESAMSIFNSLTN--------------------------------RDVSA 538
Query: 559 WNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVI 618
W I A +A+ LF + QG+KPD V + L CS HG ++
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACS-----------HGGLV 587
Query: 619 RACFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKV 678
+ G + +S K+ P+ V M+ G+ + A+++
Sbjct: 588 Q---QGKEI-------------FYSMLKLHGVSPED--VHYGCMVDLLGRAGLLEEAVQL 629
Query: 679 FSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPE-QYASLVDLL 737
DM + P+ V+ ++L+AC G V+ + EK+Q + P Y L ++
Sbjct: 630 IEDM---PMEPNDVIWNSLLAACRVQGNVEMAA---YAAEKIQVLAPERTGSYVLLSNVY 683
Query: 738 ARGGQISD 745
A G+ +D
Sbjct: 684 ASAGRWND 691
Score = 139 bits (351), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 210/462 (45%), Gaps = 41/462 (8%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M+E N SW ++I G+ R K+A+ LF ++ V N V+ +C L D+
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDE-EVTPNSVTMVCVISACAKLEDLE 253
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
G+ ++ ++ G + AL+++Y KC ID +LF + ++ N + S +
Sbjct: 254 TGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 121 CSHV--DDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLE 178
+ + V NL + VR P+ +++ +S+C++L I GKS H YV++ G E
Sbjct: 314 RQGLTREALGVFNLMMDSGVR----PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 179 RHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWM 238
+ N+L MY K A+ +FD + +K VV+WN++++G EN + A+ F M
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 239 LTEPIKPNYATILNILPICASLDEDVGYFFGREIH----------------C-------- 274
+ I ++ TI++ L + +E + F + C
Sbjct: 430 PEKNI-VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 275 -----YVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYAS 329
Y + + + DV + LV + R G E A +F + +RD+ +W A I A
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 330 NDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLR-HPYLEED 388
+A+ LF ++I ++ + PD V V L AC++ ++ GKEI L+ H ED
Sbjct: 549 AGNAERAIELFDDMI-EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED 607
Query: 389 AAVGNALVSFYAKCSDMEAAYRTFL-MICRRDLISWNSMLDA 429
G +V + +E A + M + + WNS+L A
Sbjct: 608 VHYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 237/754 (31%), Positives = 365/754 (48%), Gaps = 81/754 (10%)
Query: 166 KSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKD--VVSWNAVISGLS 223
K +H ++ FG+ L + L S Y G + A S+ D V WN++I
Sbjct: 45 KLIHQKLLSFGILTLNLTSH-LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103
Query: 224 ENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELI 283
+N LF M + P+ T + C + G H L I
Sbjct: 104 DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISS---VRCGESAHALSLVTG-FI 159
Query: 284 ADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCEL 343
++V V NALV+ Y R +A +F M D+VSWN+II YA + AL +F +
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM 219
Query: 344 ITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCS 403
+ PD++TLV++LP CA L +GK++H + + ++ + VGN LV YAKC
Sbjct: 220 TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ-NMFVGNCLVDMYAKCG 278
Query: 404 DMEAAYRTFLMICRRDLISWNSMLDAFSE------------------------------S 433
M+ A F + +D++SWN+M+ +S+ S
Sbjct: 279 MMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 338
Query: 434 GYNS-----QFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLL 488
GY + L + ML GI+P+ +T+++++ C +V KE H Y IK + L
Sbjct: 339 GYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDL 398
Query: 489 GDTEHN----IGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEA 544
H + N ++D YAKC+ + A +F SL K
Sbjct: 399 RKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE--------------------- 437
Query: 545 FMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQG--MKPDAVTIMSLLPVCS 602
RD+ W +MI Y+++ N+AL L ++ + +P+A TI L C+
Sbjct: 438 ---------RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 603 QMASVHLLRQCHGYVIRACFDGVRL--NGALLHLYAKCGSIFSASKIFQCHPQKDVVMLT 660
+A++ + +Q H Y +R + V L + L+ +YAKCGSI A +F K+ V T
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548
Query: 661 AMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKV 720
+++ GY MHG G+ AL +F +M +G D V + VL ACSH+G++D+G+E F ++ V
Sbjct: 549 SLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTV 608
Query: 721 QGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRV 780
G+ P PE YA LVDLL R G+++ A L+ MP+E VW L CRIH +VELG
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEY 668
Query: 781 VANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNN 840
A ++ E+ +++ G+Y ++SNLYA RW V IR LM+ + +KK CSW+E +
Sbjct: 669 AAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT 728
Query: 841 AFMAGDYSHPRRDMIYWVLSILDEQIKDQVTISE 874
F GD +HP IY VL ++IKD + E
Sbjct: 729 TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPE 762
Score = 229 bits (584), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 151/528 (28%), Positives = 257/528 (48%), Gaps = 59/528 (11%)
Query: 9 WITIINGFCRDGLHKEALSLFA--HELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALH 66
W ++I + +G + L LF H L +P ++ F V K+C ++ + G++ H
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTP----DNYTFPFVFKACGEISSVRCGESAH 150
Query: 67 GYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDD 126
G IS V AL+ +Y++C + D K+F ++ D V+WN ++ +A +
Sbjct: 151 ALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYA--KLGK 208
Query: 127 ARV-MNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGN 185
+V + +F M +P+++T+ VL CA LG GK LH + + + ++ VGN
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268
Query: 186 SLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLF---------- 235
L MYAK G++ +A +VF ++ KDVVSWNA+++G S+ DA RLF
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 236 ---SW----------------------MLTEPIKPNYATILNILPICASLDEDVGYFFGR 270
+W ML+ IKPN T++++L CAS+ G+
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVG---ALMHGK 385
Query: 271 EIHCYV------LRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRM--KSRDLVSWNA 322
EIHCY LR+ + V N L+ Y + + + A +F + K RD+V+W
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 323 IIAGYASNDEWLKALNLFCELITKE-MIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLR 381
+I GY+ + + KAL L E+ ++ P++ T+ L ACA L L++GK+IH Y LR
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 382 HPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLN 441
+ V N L+ YAKC + A F + ++ ++W S++ + GY + L
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 442 LLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLG 489
+ + M G + D +T+L +++ C+ GM+ + Y + + G
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACS---HSGMIDQGMEYFNRMKTVFG 610
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 195/420 (46%), Gaps = 56/420 (13%)
Query: 8 SWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHG 67
SW +II + + G K AL +F+ + + R ++ VL C SL LGK LH
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFS-RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHC 253
Query: 68 YVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA-CSHVDD 126
+ I V L+++YAKCG++D+ +F + D V+WN +++G++ +D
Sbjct: 254 FAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFED 313
Query: 127 ARVMNLFYNMH----------------------------------VRDQPKPNSVTVAIV 152
A + LF M + KPN VT+ V
Sbjct: 314 A--VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISV 371
Query: 153 LSACARLGGIFAGKSLHAYVIKF-------GLERHTLVGNSLTSMYAKRGLVHDAYSVFD 205
LS CA +G + GK +H Y IK+ G +V N L MYAK V A ++FD
Sbjct: 372 LSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFD 431
Query: 206 SI--EDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTE--PIKPNYATILNILPICASLD 261
S+ +++DVV+W +I G S++ A L S M E +PN TI L CASL
Sbjct: 432 SLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASL- 490
Query: 262 EDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWN 321
G++IH Y LR + + V N L+ Y + G +A L+F M +++ V+W
Sbjct: 491 --AALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548
Query: 322 AIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLR 381
+++ GY + +AL +F E+ + D VTL+ +L AC++ + G E YF R
Sbjct: 549 SLMTGYGMHGYGEEALGIFDEM-RRIGFKLDGVTLLVVLYACSHSGMIDQGME---YFNR 604
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
Query: 3 EPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLG 62
E + +W +I G+ + G +AL L + + R N S L +C SLA + +G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 63 KALHGYVTKLGHISCQA-VSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFAC 121
K +H Y + + VS L+++YAKCG I D +F + + VTW L++G+
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYG- 555
Query: 122 SHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAG 165
H + +F M R K + VT+ +VL AC+ G I G
Sbjct: 556 MHGYGEEALGIFDEMR-RIGFKLDGVTLLVVLYACSHSGMIDQG 598
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/707 (30%), Positives = 367/707 (51%), Gaps = 50/707 (7%)
Query: 164 AGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLS 223
+ K LHA ++ ++ + L ++Y G V A FD I+++DV +WN +ISG
Sbjct: 69 SAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYG 128
Query: 224 ENKVLGDAFRLFS-WMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAEL 282
+ R FS +ML+ + P+Y T ++L C ++ + G +IHC L+
Sbjct: 129 RAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID------GNKIHCLALKFG-F 181
Query: 283 IADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCE 342
+ DV V +L+ Y R+ A +LF M RD+ SWNA+I+GY + +AL L
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL--- 238
Query: 343 LITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKC 402
+ + DSVT+VSLL AC + G IH Y ++H LE + V N L+ YA+
Sbjct: 239 --SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG-LESELFVSNKLIDLYAEF 295
Query: 403 SDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTII 462
+ + F + RDLISWNS++ A+ + + ++L M + I+PD +T++++
Sbjct: 296 GRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLA 355
Query: 463 HFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEK 522
+ + + G+ ++ G L D IGNA++ YAK
Sbjct: 356 SILSQLGDIRACRSVQGFTLRKGWFLEDI--TIGNAVVVMYAKL---------------- 397
Query: 523 RNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKL 582
G D A F+ + D+ WN +I YA+N F ++A+ ++ +
Sbjct: 398 ----------------GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 583 QAQG-MKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIR-ACFDGVRLNGALLHLYAKCGS 640
+ +G + + T +S+LP CSQ ++ + HG +++ + V + +L +Y KCG
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501
Query: 641 IFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSA 700
+ A +F P+ + V +I + HG G+ A+ +F +ML+ GV PDH+ +LSA
Sbjct: 502 LEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Query: 701 CSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCN 760
CSH+GLVDEG F ++ GI P+ + Y +VD+ R GQ+ A + M ++ D +
Sbjct: 562 CSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS 621
Query: 761 VWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMK 820
+WG LL ACR+H V+LG++ + LFE+E +++G +V++SN+YA+ +W+GV EIR +
Sbjct: 622 IWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAH 681
Query: 821 TRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIK 867
+ L+K S +EV+ K F G+ +HP + +Y L+ L ++K
Sbjct: 682 GKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 192/702 (27%), Positives = 332/702 (47%), Gaps = 71/702 (10%)
Query: 43 HQLFSAVLKSCTSLADILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFG 102
H LF + CT+L K LH + I +S L+NLY G + F
Sbjct: 58 HTLF----RYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFD 110
Query: 103 QVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGI 162
+ N D WN+++SG+ + + + V+ F + P+ T VL AC +
Sbjct: 111 HIQNRDVYAWNLMISGYGRAG-NSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---V 166
Query: 163 FAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGL 222
G +H +KFG V SL +Y++ V +A +FD + +D+ SWNA+ISG
Sbjct: 167 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 226
Query: 223 SENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAEL 282
++ +A L + + + T++++L C E + G IH Y ++ L
Sbjct: 227 CQSGNAKEALTLSNGLRA----MDSVTVVSLLSACT---EAGDFNRGVTIHSYSIKHG-L 278
Query: 283 IADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCE 342
+++ V N L+ Y FGR + + +F RM RDL+SWN+II Y N++ L+A++LF E
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338
Query: 343 LITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKC 402
+ I PD +TL+SL + L +++ + + G+ LR + ED +GNA+V YAK
Sbjct: 339 MRLSR-IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL 397
Query: 403 SDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEG-IRPDSITILTI 461
+++A F + D+ISWN+++ ++++G+ S+ + + N M EG I + T +++
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 462 IHFCTT--VLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSL 519
+ C+ LR+GM + HG L+K GL L + + ++ D Y KC
Sbjct: 458 LPACSQAGALRQGM--KLHGRLLKNGLYL---DVFVVTSLADMYGKC------------- 499
Query: 520 LEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLF 579
G ++A F +I + PWN +I + + +A+ LF
Sbjct: 500 -------------------GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 540
Query: 580 LKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIR--ACFDGVRLNGALLHLYAK 637
++ +G+KPD +T ++LL CS V + C + ++ G ++ +Y +
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGR 600
Query: 638 CGSIFSASKIFQCHP-QKDVVMLTAMIGGYAMHG---MGKAALKVFSDMLELGVNPDHVV 693
G + +A K + Q D + A++ +HG +GK A S+ L V P+HV
Sbjct: 601 AGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIA----SEHL-FEVEPEHVG 655
Query: 694 ITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVD 735
+LS + EG++ RSI +G++ TP + VD
Sbjct: 656 YHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVD 697
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/537 (27%), Positives = 270/537 (50%), Gaps = 20/537 (3%)
Query: 8 SWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHG 67
+W +I+G+ R G E + F+ + SS + +++ F +VLK+C ++ D G +H
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSS-GLTPDYRTFPSVLKACRTVID---GNKIHC 174
Query: 68 YVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDA 127
K G + V+ +L++LY++ + + LF ++ D +WN ++SG+ C +
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY-CQSGNAK 233
Query: 128 RVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSL 187
+ L + D SVTV +LSAC G G ++H+Y IK GLE V N L
Sbjct: 234 EALTLSNGLRAMD-----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 188 TSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNY 247
+YA+ G + D VFD + +D++SWN++I N+ A LF M I+P+
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 248 ATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAEL 307
T++++ I + L + R + + LR+ + D+++ NA+V Y + G + A
Sbjct: 349 LTLISLASILSQLGDIRAC---RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 405
Query: 308 LFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLK 367
+F + + D++SWN II+GYA N +A+ ++ + + I + T VS+LPAC+
Sbjct: 406 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
Query: 368 NLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSML 427
L+ G ++HG L++ L D V +L Y KC +E A F I R + + WN+++
Sbjct: 466 ALRQGMKLHGRLLKNG-LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLI 524
Query: 428 DAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHG--YLIKTG 485
G+ + + L ML EG++PD IT +T++ C+ G+V E +++T
Sbjct: 525 ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS---HSGLVDEGQWCFEMMQTD 581
Query: 486 LLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSAD 542
+ + + G ++D Y + ++ A +S+ + + + ++S G+ D
Sbjct: 582 YGITPSLKHYG-CMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD 637
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 132/276 (47%), Gaps = 18/276 (6%)
Query: 506 CRNIKYAFNVFQSLL---EKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLM 562
C N++ A + L+ + +N+ +++ Y G+ A TF I RD+ WNLM
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 563 IRVYAENDFPNQALSLF-LKLQAQGMKPDAVTIMSLLPVCSQMA---SVHLLRQCHGYVI 618
I Y ++ + F L + + G+ PD T S+L C + +H L G++
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFM- 182
Query: 619 RACFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKV 678
+D V + +L+HLY++ ++ +A +F P +D+ AMI GY G K AL +
Sbjct: 183 ---WD-VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL 238
Query: 679 FSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLA 738
+ + + D V + ++LSAC+ AG + G+ I S G++ L+DL A
Sbjct: 239 SNGLRAM----DSVTVVSLLSACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDLYA 293
Query: 739 RGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHE 774
G++ D + +RM V D W +++ A ++ +
Sbjct: 294 EFGRLRDCQKVFDRMYVR-DLISWNSIIKAYELNEQ 328
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 237/814 (29%), Positives = 412/814 (50%), Gaps = 59/814 (7%)
Query: 65 LHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSH- 123
+HG + G +S L+NLY++ G + K+F ++ + V+W+ ++S AC+H
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVS--ACNHH 123
Query: 124 --VDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGK----SLHAYVIKFGL 177
+++ V+ L + +D P N ++ + AC+ L G G+ L ++++K G
Sbjct: 124 GIYEESLVVFLEFWRTRKDSP--NEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGF 179
Query: 178 ERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSW 237
+R VG L Y K G + A VFD++ +K V+W +ISG + + +LF
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 238 MLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYL 297
++ + + P+ + +L C+ L G G++IH ++LR L D S+ N L+ Y+
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEG---GKQIHAHILRYG-LEMDASLMNVLIDSYV 295
Query: 298 RFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLV 357
+ GR A LF M +++++SW +++GY N +A+ LF + +K + PD
Sbjct: 296 KCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYACS 354
Query: 358 SLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICR 417
S+L +CA L L G ++H Y ++ L D+ V N+L+ YAKC + A + F +
Sbjct: 355 SILTSCASLHALGFGTQVHAYTIK-ANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA 413
Query: 418 RDLISWNSMLDAFSESGYNSQF---LNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMV 474
D++ +N+M++ +S G + LN+ M IRP +T ++++ ++ G+
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLS 473
Query: 475 KETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISG 534
K+ HG + K GL + + G+A++D Y+ C +K
Sbjct: 474 KQIHGLMFKYGL---NLDIFAGSALIDVYSNCYCLK------------------------ 506
Query: 535 YANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTI 594
++ + F + +DL WN M Y + +AL+LFL+LQ +PD T
Sbjct: 507 --------DSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF 558
Query: 595 MSLLPVCSQMASVHLLRQCHGYVIRACFD-GVRLNGALLHLYAKCGSIFSASKIFQCHPQ 653
+++ +ASV L ++ H +++ + + ALL +YAKCGS A K F
Sbjct: 559 ANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAAS 618
Query: 654 KDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEI 713
+DVV ++I YA HG GK AL++ M+ G+ P+++ VLSACSHAGLV++GL+
Sbjct: 619 RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQ 678
Query: 714 FRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHH 773
F + + GI+P E Y +V LL R G+++ A L+ +MP + VW +LL C
Sbjct: 679 FELMLRF-GIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAG 737
Query: 774 EVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWI 833
VEL A + + G++ ++SN+YA+ W ++R+ MK + K SWI
Sbjct: 738 NVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWI 797
Query: 834 EVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIK 867
+ ++ + F++ D SH + + IY VL L QI+
Sbjct: 798 GINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 167/595 (28%), Positives = 299/595 (50%), Gaps = 23/595 (3%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
+ E + +W T+I+G + G +L LF ++ + V + + S VL +C+ L +
Sbjct: 209 LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN--VVPDGYILSTVLSACSILPFLE 266
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
GK +H ++ + G ++ L++ Y KCG + +KLF + N + ++W LLSG+
Sbjct: 267 GGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYK 326
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
+ + M LF +M + KP+ + +L++CA L + G +HAY IK L
Sbjct: 327 QNALHK-EAMELFTSMS-KFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGND 384
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKV---LGDAFRLFSW 237
+ V NSL MYAK + DA VFD DVV +NA+I G S L +A +F
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRD 444
Query: 238 MLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYL 297
M I+P+ T +++L ASL ++IH + + L D+ +AL+ Y
Sbjct: 445 MRFRLIRPSLLTFVSLLRASASL---TSLGLSKQIHGLMFKYG-LNLDIFAGSALIDVYS 500
Query: 298 RFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCEL-ITKEMIWPDSVTL 356
+++ L+F MK +DLV WN++ AGY E +ALNLF EL +++E PD T
Sbjct: 501 NCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRER--PDEFTF 558
Query: 357 VSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMIC 416
+++ A L ++++G+E H L+ LE + + NAL+ YAKC E A++ F
Sbjct: 559 ANMVTAAGNLASVQLGQEFHCQLLKRG-LECNPYITNALLDMYAKCGSPEDAHKAFDSAA 617
Query: 417 RRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTV-LREGMVK 475
RD++ WNS++ +++ G + L +L M+ EGI P+ IT + ++ C+ L E +K
Sbjct: 618 SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLK 677
Query: 476 ETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGY 535
+ +++ G + +TEH + ++ + + A + + + K + + ++SG
Sbjct: 678 QFE-LMLRFG-IEPETEHYV--CMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGC 733
Query: 536 ANCGS---ADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGM 587
A G+ A+ A +D + ++ +YA +A + +++ +G+
Sbjct: 734 AKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGV 788
>sp|O49680|PP324_ARATH Pentatricopeptide repeat-containing protein At4g19220,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E2 PE=3
SV=2
Length = 951
Score = 361 bits (926), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 235/783 (30%), Positives = 404/783 (51%), Gaps = 60/783 (7%)
Query: 65 LHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSG-FACSH 123
LH + G + ++ AL+NLYAK + +F +++ D V+WN +++ A H
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 124 VDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGL--ERHT 181
+ + F +M Q + ++VT + V+SAC+ + + G+SLH VIK G E H
Sbjct: 270 --PRKSLQYFKSMTGSGQ-EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHV 326
Query: 182 LVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT- 240
VGNS+ SMY+K G A +VF+ + +DV+S NA+++G + N + +AF + + M +
Sbjct: 327 SVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSV 386
Query: 241 EPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFG 300
+ I+P+ AT+++I IC L GR +H Y +R + V N+++ Y + G
Sbjct: 387 DKIQPDIATVVSITSICGDLSFSRE---GRAVHGYTVRMEMQSRALEVINSVIDMYGKCG 443
Query: 301 RTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSV-TLVSL 359
T +AELLF+ RDLVSWN++I+ ++ N KA NLF E++++ S+ T++++
Sbjct: 444 LTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAI 503
Query: 360 LPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAY-RTFLMICRR 418
L +C +L GK +H + L+ ++ N++++ Y C D+ +A+ R M R
Sbjct: 504 LTSCDSSDSLIFGKSVHCW-LQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETR 562
Query: 419 DLISWNSMLDAFSESGYNSQFLNLLNCMLMEG-IRPDSITILTIIHFCTTVLREGMVKET 477
DL SWNS++ + SG++ + L M EG IR D IT+L I + G+V +
Sbjct: 563 DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNL---GLVLQG 619
Query: 478 ---HGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISG 534
HG IK+ L + + + N ++ Y +C++I
Sbjct: 620 RCFHGLAIKS---LRELDTQLQNTLITMYGRCKDI------------------------- 651
Query: 535 YANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTI 594
+ A F I +L WN +I ++N + LF L+ ++P+ +T
Sbjct: 652 -------ESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITF 701
Query: 595 MSLLPVCSQMASVHLLRQCHGYVIRACFDGVR-LNGALLHLYAKCGSIFSASKIFQCHPQ 653
+ LL +Q+ S Q H ++IR F ++ AL+ +Y+ CG + + K+F+
Sbjct: 702 VGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGV 761
Query: 654 KDVVMLTAMIGGYAMHGMGKAALKVFSDMLELG-VNPDHVVITAVLSACSHAGLVDEGLE 712
+ ++I + HGMG+ A+++F ++ + P+ ++LSACSH+G +DEGL
Sbjct: 762 NSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLS 821
Query: 713 IFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIH 772
++ +E+ G+KP E +VD+L R G++ +AY + + VWG LL AC H
Sbjct: 822 YYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYH 881
Query: 773 HEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSW 832
+ +LG+ VA LFEME DN Y+ ++N Y W+ V +RK+++ LKK S
Sbjct: 882 GDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSV 941
Query: 833 IEV 835
I+V
Sbjct: 942 IDV 944
Score = 197 bits (500), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/554 (26%), Positives = 266/554 (48%), Gaps = 50/554 (9%)
Query: 166 KSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSEN 225
+S+H + +K GL + + L + Y + G + + +FD +++KDV+ WN++I+ L++N
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 226 KVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIAD 285
A LF M+ K N +L ++L +HC + L+ D
Sbjct: 167 GRYIAAVGLFIEMIH---KGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETG-LVGD 222
Query: 286 VSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELIT 345
S+CNAL++ Y + AE +F M+ RD+VSWN I+ +N K+L F + +T
Sbjct: 223 SSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYF-KSMT 281
Query: 346 KEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYL-EEDAAVGNALVSFYAKCSD 404
D+VT ++ AC+ ++ L +G+ +HG ++ Y E +VGN+++S Y+KC D
Sbjct: 282 GSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGD 341
Query: 405 MEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCML-MEGIRPDSITILTIIH 463
EAA F + RD+IS N++L+ F+ +G + +LN M ++ I+PD T+++I
Sbjct: 342 TEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITS 401
Query: 464 FCT--TVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLE 521
C + REG + HGY ++ + +
Sbjct: 402 ICGDLSFSREG--RAVHGYTVRMEM----------------------------------Q 425
Query: 522 KRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLK 581
R L N VI Y CG +A + F RDL WN MI +++N F ++A +LF +
Sbjct: 426 SRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKE 485
Query: 582 LQAQ--GMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACF-DGVRLNGALLHLYAKC 638
+ ++ K T++++L C S+ + H ++ + F D + +++++Y C
Sbjct: 486 VVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGC 545
Query: 639 GSIFSAS-KIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELG-VNPDHVVITA 696
+ SA ++ +D+ ++I G A G +L+ F M G + D + +
Sbjct: 546 RDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLG 605
Query: 697 VLSACSHAGLVDEG 710
+SA + GLV +G
Sbjct: 606 TISASGNLGLVLQG 619
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 360 bits (923), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 207/702 (29%), Positives = 358/702 (50%), Gaps = 45/702 (6%)
Query: 169 HAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVL 228
HA +I G + LT + G ++ A +F S++ DV +N ++ G S N+
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 229 GDAFRLFSWML-TEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVS 287
+ +F+ + + +KPN +T + + +D GR IH + +++
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA---GRVIHGQAVVDG-CDSELL 155
Query: 288 VCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKE 347
+ + +V Y +F R E+A +F RM +D + WN +I+GY N+ +++++ +F +LI +
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 348 MIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEA 407
D+ TL+ +LPA A L+ L++G +IH + D + +S Y+KC ++
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL-TGFISLYSKCGKIKM 274
Query: 408 AYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTT 467
F + D++++N+M+ ++ +G L+L +++ G R S T+++++
Sbjct: 275 GSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH 334
Query: 468 VLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVT 527
++ ++ HGY +K+ L + ++ A+ Y+K I+ A +F EK
Sbjct: 335 LM---LIYAIHGYCLKSNFL---SHASVSTALTTVYSKLNEIESARKLFDESPEK----- 383
Query: 528 FNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGM 587
L WN MI Y +N A+SLF ++Q
Sbjct: 384 ---------------------------SLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 588 KPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDG-VRLNGALLHLYAKCGSIFSASK 646
P+ VTI +L C+Q+ ++ L + H V F+ + ++ AL+ +YAKCGSI A +
Sbjct: 417 SPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
Query: 647 IFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGL 706
+F +K+ V MI GY +HG G+ AL +F +ML G+ P V VL ACSHAGL
Sbjct: 477 LFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGL 536
Query: 707 VDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLL 766
V EG EIF S+ G +P+ + YA +VD+L R G + A + M +E +VW TLL
Sbjct: 537 VKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
Query: 767 GACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKK 826
GACRIH + L R V+ +LFE++ DN+G +V++SN+++AD + +R+ K R L K
Sbjct: 597 GACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAK 656
Query: 827 PAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIKD 868
+ IE+ + F +GD SHP+ IY L L+ ++++
Sbjct: 657 APGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMRE 698
Score = 202 bits (514), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 250/513 (48%), Gaps = 24/513 (4%)
Query: 50 LKSCTSLADILLGKA---LHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDN 106
K TS++ + A LHG+ + ++ L + G I +F V
Sbjct: 27 FKRSTSISHLAQTHAQIILHGFRNDISLLT------KLTQRLSDLGAIYYARDIFLSVQR 80
Query: 107 TDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGK 166
D +N+L+ GF+ + + +++F ++ KPNS T A +SA + AG+
Sbjct: 81 PDVFLFNVLMRGFSVNESPHSS-LSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGR 139
Query: 167 SLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENK 226
+H + G + L+G+++ MY K V DA VFD + +KD + WN +ISG +N+
Sbjct: 140 VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNE 199
Query: 227 VLGDAFRLFSWMLTEP-IKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIAD 285
+ ++ ++F ++ E + + T+L+ILP A L E G +IH + D
Sbjct: 200 MYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQE---LRLGMQIHSLATKTGCYSHD 256
Query: 286 VSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELIT 345
V +S Y + G+ + LFR + D+V++NA+I GY SN E +L+LF EL+
Sbjct: 257 Y-VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML 315
Query: 346 KEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDM 405
S TLVSL+P +L + IHGY L+ +L A+V AL + Y+K +++
Sbjct: 316 SGARLRSS-TLVSLVPVSGHLMLIYA---IHGYCLKSNFLSH-ASVSTALTTVYSKLNEI 370
Query: 406 EAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFC 465
E+A + F + L SWN+M+ ++++G ++L M P+ +TI I+ C
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 466 TTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNL 525
+ + K H + T ++ + A++ YAKC +I A +F L+ K+N
Sbjct: 431 AQLGALSLGKWVHDLVRSTDF---ESSIYVSTALIGMYAKCGSIAEARRLFD-LMTKKNE 486
Query: 526 VTFNPVISGYANCGSADEAFMTFSRIYARDLTP 558
VT+N +ISGY G EA F + +TP
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITP 519
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 228/473 (48%), Gaps = 14/473 (2%)
Query: 4 PNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGK 63
P+ + ++ GF + +LS+FAH L+ S ++ N ++ + + + D G+
Sbjct: 81 PDVFLFNVLMRGFSVNESPHSSLSVFAH-LRKSTDLKPNSSTYAFAISAASGFRDDRAGR 139
Query: 64 ALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSH 123
+HG G S + ++ +Y K ++D K+F ++ D + WN ++SG+ +
Sbjct: 140 VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNE 199
Query: 124 VDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLV 183
+ + +F ++ + ++ T+ +L A A L + G +H+ K G H V
Sbjct: 200 MY-VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV 258
Query: 184 GNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPI 243
S+Y+K G + ++F D+V++NA+I G + N + LF ++
Sbjct: 259 LTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318
Query: 244 KPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTE 303
+ +T+++++P+ L IH Y L+ + ++ SV AL + Y + E
Sbjct: 319 RLRSSTLVSLVPVSGHL------MLIYAIHGYCLK-SNFLSHASVSTALTTVYSKLNEIE 371
Query: 304 EAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPAC 363
A LF + L SWNA+I+GY N A++LF E+ K P+ VT+ +L AC
Sbjct: 372 SARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM-QKSEFSPNPVTITCILSAC 430
Query: 364 AYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISW 423
A L L +GK +H +R E V AL+ YAKC + A R F ++ +++ ++W
Sbjct: 431 AQLGALSLGKWVHD-LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTW 489
Query: 424 NSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKE 476
N+M+ + G + LN+ ML GI P +T L +++ C+ G+VKE
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACS---HAGLVKE 539
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 186/375 (49%), Gaps = 11/375 (2%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E + W T+I+G+ ++ ++ E++ +F +L + R + +L + L ++
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVF-RDLINESCTRLDTTTLLDILPAVAELQELR 238
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
LG +H TK G S V ++LY+KCG I LF + D V +N ++ G+
Sbjct: 239 LGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYT 298
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
S+ + ++LF + + +S V++V L I+A +H Y +K H
Sbjct: 299 -SNGETELSLSLFKELMLSGARLRSSTLVSLV-PVSGHLMLIYA---IHGYCLKSNFLSH 353
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT 240
V +LT++Y+K + A +FD +K + SWNA+ISG ++N + DA LF M
Sbjct: 354 ASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK 413
Query: 241 EPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFG 300
PN TI IL CA L G+ +H V R + + + V AL+ Y + G
Sbjct: 414 SEFSPNPVTITCILSACAQLG---ALSLGKWVHDLV-RSTDFESSIYVSTALIGMYAKCG 469
Query: 301 RTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLL 360
EA LF M ++ V+WN +I+GY + + +ALN+F E++ I P VT + +L
Sbjct: 470 SIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG-ITPTPVTFLCVL 528
Query: 361 PACAYLKNLKVGKEI 375
AC++ +K G EI
Sbjct: 529 YACSHAGLVKEGDEI 543
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 142/277 (51%), Gaps = 13/277 (4%)
Query: 3 EPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLAD-ILL 61
+P+ ++ +I+G+ +G + +LSLF + S +R S+ L S ++ ++L
Sbjct: 284 KPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR------SSTLVSLVPVSGHLML 337
Query: 62 GKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFAC 121
A+HGY K +S +VS AL +Y+K I+ KLF + +WN ++SG+
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 122 SHV-DDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
+ + +DA ++LF M + + PN VT+ +LSACA+LG + GK +H V E
Sbjct: 398 NGLTEDA--ISLFREMQ-KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT 240
V +L MYAK G + +A +FD + K+ V+WN +ISG + +A +F ML
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 241 EPIKPNYATILNILPIC--ASLDEDVGYFFGREIHCY 275
I P T L +L C A L ++ F IH Y
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY 551
Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 605 ASVHLLRQCHGYVIRACF-DGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMI 663
S+ L Q H +I F + + L L + G+I+ A IF + DV + ++
Sbjct: 31 TSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLM 90
Query: 664 GGYAMHGMGKAALKVFSDMLE-LGVNPDHVVITAVLSACS-----HAGLVDEGLEIFRSI 717
G++++ ++L VF+ + + + P+ +SA S AG V G +
Sbjct: 91 RGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAV---- 146
Query: 718 EKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACR 770
V G +++V + + ++ DA + +RMP E D +W T++ R
Sbjct: 147 --VDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP-EKDTILWNTMISGYR 196
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 359 bits (922), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 192/582 (32%), Positives = 322/582 (55%), Gaps = 13/582 (2%)
Query: 299 FGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVS 358
F E A +F + + +WN +I YAS + + ++ F +++++ +P+ T
Sbjct: 77 FASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPF 136
Query: 359 LLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRR 418
L+ A A + +L +G+ +HG ++ + D V N+L+ Y C D+++A + F I +
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSA-VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 195
Query: 419 DLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETH 478
D++SWNSM++ F + G + L L M E ++ +T++ ++ C + ++
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 479 GYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANC 538
Y+ + + + T + NA+LD Y KC +I+ A +F ++ EK N VT+ ++ GYA
Sbjct: 256 SYIEENRVNVNLT---LANAMLDMYTKCGSIEDAKRLFDAMEEKDN-VTWTTMLDGYAIS 311
Query: 539 GSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQ-GMKPDAVTIMSL 597
+ A + + +D+ WN +I Y +N PN+AL +F +LQ Q MK + +T++S
Sbjct: 312 EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 371
Query: 598 LPVCSQMASVHLLRQCHGYVIRACFDGVRLN----GALLHLYAKCGSIFSASKIFQCHPQ 653
L C+Q+ ++ L R H Y+ + G+R+N AL+H+Y+KCG + + ++F +
Sbjct: 372 LSACAQVGALELGRWIHSYIKK---HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK 428
Query: 654 KDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEI 713
+DV + +AMIGG AMHG G A+ +F M E V P+ V T V ACSH GLVDE +
Sbjct: 429 RDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL 488
Query: 714 FRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHH 773
F +E GI P + YA +VD+L R G + A + MP+ +VWG LLGAC+IH
Sbjct: 489 FHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 548
Query: 774 EVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWI 833
+ L + RL E+E N G +V++SN+YA +W+ V E+RK M+ LKK CS I
Sbjct: 549 NLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSI 608
Query: 834 EVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIKDQVTISEI 875
E++ + F++GD +HP + +Y L + E++K EI
Sbjct: 609 EIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEI 650
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 225/475 (47%), Gaps = 45/475 (9%)
Query: 35 SSPSVRHNHQLFSAVLKSCTSLADILLGKALHGYVTKLGHISCQAVSKALLNLYA--KCG 92
+ P+ + ++++ C SL + K HG++ + G S + L + A
Sbjct: 22 NQPTTNNERSRHISLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78
Query: 93 VIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIV 152
++ K+F ++ + WN L+ +A S D + F +M Q PN T +
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYA-SGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 153 LSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDV 212
+ A A + + G+SLH +K + V NSL Y G + A VF +I++KDV
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197
Query: 213 VSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREI 272
VSWN++I+G + A LF M +E +K ++ T++ +L CA + FGR++
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR---NLEFGRQV 254
Query: 273 HCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLF----------------------- 309
C + + ++++ NA++ Y + G E+A+ LF
Sbjct: 255 -CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 313
Query: 310 --------RRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLP 361
M +D+V+WNA+I+ Y N + +AL +F EL ++ + + +TLVS L
Sbjct: 314 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 373
Query: 362 ACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLI 421
ACA + L++G+ IH Y +H + + V +AL+ Y+KC D+E + F + +RD+
Sbjct: 374 ACAQVGALELGRWIHSYIKKHG-IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 422 SWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKE 476
W++M+ + G ++ +++ M ++P+ +T + C+ G+V E
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS---HTGLVDE 484
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 198/399 (49%), Gaps = 44/399 (11%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAH-ELQSSPSVRHNHQLFSAVLKSCTSLADI 59
+ +PN+ +W T+I + LS++A ++ S N F ++K+ ++ +
Sbjct: 90 IPKPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSL 147
Query: 60 LLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGF 119
LG++LHG K S V+ +L++ Y CG +D K+F + D V+WN +++GF
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 120 ACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLER 179
D + + LF M D K + VT+ VLSACA++ + G+ + +Y+ + +
Sbjct: 208 VQKGSPD-KALELFKKMESEDV-KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 180 HTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKD---------------------------- 211
+ + N++ MY K G + DA +FD++E+KD
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 212 ---VVSWNAVISGLSENKVLGDAFRLFSWM-LTEPIKPNYATILNILPICASLDEDVGYF 267
+V+WNA+IS +N +A +F + L + +K N T+++ L CA VG
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA----QVGAL 381
Query: 268 -FGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAG 326
GR IH Y+ ++ + + V +AL+ Y + G E++ +F ++ RD+ W+A+I G
Sbjct: 382 ELGRWIHSYI-KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG 440
Query: 327 YASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAY 365
A + +A+++F ++ + + P+ VT ++ AC++
Sbjct: 441 LAMHGCGNEAVDMFYKM-QEANVKPNGVTFTNVFCACSH 478
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 147/329 (44%), Gaps = 40/329 (12%)
Query: 459 LTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQS 518
+++I C + LR+ +K+THG++I+TG D Y+ + A
Sbjct: 34 ISLIERCVS-LRQ--LKQTHGHMIRTG------------TFSDPYSASKLFAMA------ 72
Query: 519 LLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSL 578
+S +A S + A F I + WN +IR YA P ++
Sbjct: 73 ------------ALSSFA---SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWA 117
Query: 579 FLKLQAQGM-KPDAVTIMSLLPVCSQMASVHLLRQCHGYVIR-ACFDGVRLNGALLHLYA 636
FL + ++ P+ T L+ ++++S+ L + HG ++ A V + +L+H Y
Sbjct: 118 FLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYF 177
Query: 637 KCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITA 696
CG + SA K+F +KDVV +MI G+ G AL++F M V HV +
Sbjct: 178 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 237
Query: 697 VLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVE 756
VLSAC+ ++ G ++ IE+ + + +++D+ + G I DA L + M E
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENR-VNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-E 295
Query: 757 ADCNVWGTLLGACRIHHEVELGRVVANRL 785
D W T+L I + E R V N +
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSM 324
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 7/184 (3%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M + + +W +I+ + ++G EAL +F HELQ +++ N + L +C + +
Sbjct: 324 MPQKDIVAWNALISAYEQNGKPNEALIVF-HELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
LG+ +H Y+ K G V+ AL+++Y+KCG ++ ++F V+ D W+ ++ G A
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSL-HAYVIKFGL-- 177
H +++FY M KPN VT V AC+ G + +SL H +G+
Sbjct: 443 M-HGCGNEAVDMFYKMQ-EANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVP 500
Query: 178 -ERH 180
E+H
Sbjct: 501 EEKH 504
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 353 bits (906), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 207/685 (30%), Positives = 362/685 (52%), Gaps = 54/685 (7%)
Query: 191 YAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPN---Y 247
+A L+ DA +FD + D WN +I G + + +A + +S M+ +K + Y
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 248 ATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAEL 307
++ + +SL+E G++IH V++ ++DV VCN+L+S Y++ G +AE
Sbjct: 134 PFVIKSVAGISSLEE------GKKIHAMVIKLG-FVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 308 LFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLK 367
+F M RD+VSWN++I+GY + + +L LF E++ K PD + +S L AC+++
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEML-KCGFKPDRFSTMSALGACSHVY 245
Query: 368 NLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSML 427
+ K+GKEIH + +R D V +++ Y+K ++ A R F + +R++++WN M+
Sbjct: 246 SPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMI 305
Query: 428 DAFSESG-YNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGL 486
++ +G FL G++PD IT + ++ + + EG + HGY ++ G
Sbjct: 306 GCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLP--ASAILEG--RTIHGYAMRRGF 361
Query: 487 LLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFM 546
L ++V +I Y CG A +
Sbjct: 362 L-----------------------------------PHMVLETALIDMYGECGQLKSAEV 386
Query: 547 TFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMAS 606
F R+ +++ WN +I Y +N AL LF +L + PD+ TI S+LP ++ S
Sbjct: 387 IFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLS 446
Query: 607 VHLLRQCHGYVIRACF--DGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIG 664
+ R+ H Y++++ + + + LN +L+H+YA CG + A K F KDVV ++I
Sbjct: 447 LSEGREIHAYIVKSRYWSNTIILN-SLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIM 505
Query: 665 GYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIK 724
YA+HG G+ ++ +FS+M+ VNP+ ++L+ACS +G+VDEG E F S+++ GI
Sbjct: 506 AYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGID 565
Query: 725 PTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANR 784
P E Y ++DL+ R G S A + MP +WG+LL A R H ++ + A +
Sbjct: 566 PGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQ 625
Query: 785 LFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMA 844
+F+ME DN G YV++ N+YA RW+ V I+ LM+++ + + ++ S +E + K++ F
Sbjct: 626 IFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTN 685
Query: 845 GDYSHPRRDMIYWVLSILDEQIKDQ 869
GD SH + IY VL ++ + ++
Sbjct: 686 GDRSHVATNKIYEVLDVVSRMVGEE 710
Score = 236 bits (601), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 170/585 (29%), Positives = 280/585 (47%), Gaps = 57/585 (9%)
Query: 69 VTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDAR 128
VTK ++ A+++AL +A +++D +LF +++ D WN+++ GF +
Sbjct: 58 VTK--QVNDPALTRALRG-FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEA 114
Query: 129 VMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLT 188
V FY+ V K ++ T V+ + A + + GK +HA VIK G V NSL
Sbjct: 115 VQ--FYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172
Query: 189 SMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFR---LFSWMLTEPIKP 245
S+Y K G DA VF+ + ++D+VSWN++ISG LGD F LF ML KP
Sbjct: 173 SLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGY---LALGDGFSSLMLFKEMLKCGFKP 229
Query: 246 NYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEA 305
+ + ++ L C+ + G+EIHC+ +R DV V +++ Y ++G A
Sbjct: 230 DRFSTMSALGACSHVYSPK---MGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA 286
Query: 306 ELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAY 365
E +F M R++V+WN +I YA N A F ++ + + PD +T ++LLPA A
Sbjct: 287 ERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAI 346
Query: 366 LKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNS 425
L+ G+ IHGY +R +L + AL+ Y +C +++A F + +++ISWNS
Sbjct: 347 LE----GRTIHGYAMRRGFLPH-MVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNS 401
Query: 426 MLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTG 485
++ A+ ++G N L L + + PDS TI +I+ L +E H Y++K+
Sbjct: 402 IIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKS- 460
Query: 486 LLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAF 545
+Y N + N ++ YA CG ++A
Sbjct: 461 ------------------------RYWSNT----------IILNSLVHMYAMCGDLEDAR 486
Query: 546 MTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMA 605
F+ I +D+ WN +I YA + F ++ LF ++ A + P+ T SLL CS
Sbjct: 487 KCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISG 546
Query: 606 SVHLLRQCHGYVIR--ACFDGVRLNGALLHLYAKCGSIFSASKIF 648
V + + R G+ G +L L + G+ FSA+K F
Sbjct: 547 MVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGN-FSAAKRF 590
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 150/483 (31%), Positives = 256/483 (53%), Gaps = 19/483 (3%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M + +A W +I GF GL+ EA+ ++ + + V+ + + V+KS ++ +
Sbjct: 90 MNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG--VKADTFTYPFVIKSVAGISSLE 147
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
GK +H V KLG +S V +L++LY K G D K+F ++ D V+WN ++SG+
Sbjct: 148 EGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGY- 206
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLER- 179
+ D + LF M ++ KP+ + L AC+ + GK +H + ++ +E
Sbjct: 207 LALGDGFSSLMLFKEM-LKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265
Query: 180 HTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWML 239
+V S+ MY+K G V A +F+ + +++V+WN +I + N + DAF F M
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 240 TE-PIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLR 298
+ ++P+ T +N+LP A L+ GR IH Y +RR + + + AL+ Y
Sbjct: 326 EQNGLQPDVITSINLLPASAILE-------GRTIHGYAMRRG-FLPHMVLETALIDMYGE 377
Query: 299 FGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVS 358
G+ + AE++F RM ++++SWN+IIA Y N + AL LF EL ++ PDS T+ S
Sbjct: 378 CGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV-PDSTTIAS 436
Query: 359 LLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRR 418
+LPA A +L G+EIH Y ++ Y + + N+LV YA C D+E A + F I +
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYW-SNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 419 DLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETH 478
D++SWNS++ A++ G+ + L + M+ + P+ T +++ C+ GMV E
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSI---SGMVDEGW 552
Query: 479 GYL 481
Y
Sbjct: 553 EYF 555
Score = 97.1 bits (240), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 116/237 (48%), Gaps = 2/237 (0%)
Query: 532 ISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDA 591
+ G+A+ ++A F + D WN+MI+ + +A+ + ++ G+K D
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 592 VTIMSLLPVCSQMASVHLLRQCHGYVIRACF-DGVRLNGALLHLYAKCGSIFSASKIFQC 650
T ++ + ++S+ ++ H VI+ F V + +L+ LY K G + A K+F+
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 651 HPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEG 710
P++D+V +MI GY G G ++L +F +ML+ G PD + L ACSH G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 711 LEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLG 767
EI + + S++D+ ++ G++S A + N M ++ + W ++G
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIG 306
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 352 bits (903), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 230/747 (30%), Positives = 384/747 (51%), Gaps = 59/747 (7%)
Query: 135 NMHVRDQPKP-NSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAK 193
++ RD +P +SVT + +L +C R GK +HA +I+F +E +++ NSL S+Y+K
Sbjct: 50 DLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSK 109
Query: 194 RGLVHDAYSVFDSIE---DKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATI 250
G A VF+++ +DVVSW+A+++ N DA ++F L + PN
Sbjct: 110 SGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCY 169
Query: 251 LNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRT-EEAELLF 309
++ C++ D VG GR ++++ +DV V +L+ +++ + E A +F
Sbjct: 170 TAVIRACSNSDF-VG--VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVF 226
Query: 310 RRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNL 369
+M ++V+W +I +A+ F +++ D TL S+ ACA L+NL
Sbjct: 227 DKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG-FESDKFTLSSVFSACAELENL 285
Query: 370 KVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCS---DMEAAYRTFLMICRRDLISWNSM 426
+GK++H + +R +++ V +LV YAKCS ++ + F + ++SW ++
Sbjct: 286 SLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 427 LDAFSES-GYNSQFLNLLNCMLMEG-IRPDSITILTIIHFCTTVLREGMVKETHGYLIKT 484
+ + ++ ++ +NL + M+ +G + P+ T + C + + K+ G K
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 485 GLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEA 544
GL + ++ N+++ + K ++ A F+SL EK NLV++N + G + ++A
Sbjct: 403 GLA---SNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFEQA 458
Query: 545 FMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQM 604
F S I R+L A T SLL + +
Sbjct: 459 FKLLSEITERELGV-------------------------------SAFTFASLLSGVANV 487
Query: 605 ASVHLLRQCHGYVIRACFDGVRLN----GALLHLYAKCGSIFSASKIFQCHPQKDVVMLT 660
S+ Q H V++ G+ N AL+ +Y+KCGSI +AS++F ++V+ T
Sbjct: 488 GSIRKGEQIHSQVVKL---GLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWT 544
Query: 661 AMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKV 720
+MI G+A HG L+ F+ M+E GV P+ V A+LSACSH GLV EG F S+ +
Sbjct: 545 SMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYED 604
Query: 721 QGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRV 780
IKP E YA +VDLL R G ++DA+ +N MP +AD VW T LGACR+H ELG++
Sbjct: 605 HKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKL 664
Query: 781 VANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNN 840
A ++ E++ + Y+ +SN+YA +W+ E+R+ MK R+L K CSWIEV K +
Sbjct: 665 AARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIH 724
Query: 841 AFMAGDYSHPRRDMIYWVLSILDEQIK 867
F GD +HP IY L L +IK
Sbjct: 725 KFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 140/478 (29%), Positives = 253/478 (52%), Gaps = 26/478 (5%)
Query: 8 SWITIINGFCRDGLHKEALSLFAH--ELQSSPSVRHNHQLFSAVLKSCTSLADILLGKAL 65
SW ++ + +G +A+ +F EL P N ++AV+++C++ + +G+
Sbjct: 133 SWSAMMACYGNNGRELDAIKVFVEFLELGLVP----NDYCYTAVIRACSNSDFVGVGRVT 188
Query: 66 HGYVTKLGHISCQA-VSKALLNLYAKC-GVIDDCYKLFGQVDNTDPVTWNILLSGFACSH 123
G++ K GH V +L++++ K ++ YK+F ++ + VTW ++++ C
Sbjct: 189 LGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT--RCMQ 246
Query: 124 VDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLV 183
+ R F+ V + + T++ V SACA L + GK LH++ I+ GL V
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--V 304
Query: 184 GNSLTSMYAK---RGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLG-DAFRLFSWML 239
SL MYAK G V D VFD +ED V+SW A+I+G +N L +A LFS M+
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364
Query: 240 TEP-IKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLR 298
T+ ++PN+ T + C +L + G+++ +R L ++ SV N+++S +++
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPR---VGKQVLGQAFKRG-LASNSSVANSVISMFVK 420
Query: 299 FGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVS 358
R E+A+ F + ++LVS+N + G N + +A L E+ +E+ + T S
Sbjct: 421 SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL-GVSAFTFAS 479
Query: 359 LLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRR 418
LL A + +++ G++IH ++ L + V NAL+S Y+KC ++ A R F + R
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVKLG-LSCNQPVCNALISMYSKCGSIDTASRVFNFMENR 538
Query: 419 DLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKE 476
++ISW SM+ F++ G+ + L N M+ EG++P+ +T + I+ C+ V G+V E
Sbjct: 539 NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV---GLVSE 593
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 177/702 (25%), Positives = 325/702 (46%), Gaps = 79/702 (11%)
Query: 46 FSAVLKSCTSLADILLGKALHGYVTKLGHISCQAVSKALLNLYAKCG---VIDDCYKLFG 102
FS++LKSC D LGK +H + + + +L++LY+K G +D ++
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124
Query: 103 QVDNTDPVTWNILLS--GFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLG 160
+ D V+W+ +++ G +D +V F + + PN V+ AC+
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL----VPNDYCYTAVIRACSNSD 180
Query: 161 GIFAGKSLHAYVIKFG-LERHTLVGNSLTSMYAK-RGLVHDAYSVFDSIEDKDVVSWNAV 218
+ G+ +++K G E VG SL M+ K +AY VFD + + +VV+W +
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 219 ISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLR 278
I+ + +A R F M+ + + T+ ++ CA L+ G+++H + +R
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELE---NLSLGKQLHSWAIR 297
Query: 279 RAELIADVSVCNALVSFYLRF---GRTEEAELLFRRMKSRDLVSWNAIIAGYASN-DEWL 334
L+ DV +LV Y + G ++ +F RM+ ++SW A+I GY N +
Sbjct: 298 SG-LVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 335 KALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNA 394
+A+NLF E+IT+ + P+ T S AC L + +VGK++ G + L +++V N+
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRG-LASNSSVANS 413
Query: 395 LVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPD 454
++S + K ME A R F + ++L+S+N+ LD + Q LL+ + +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 455 SITILTIIHFCTTV--LREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYA 512
+ T +++ V +R+G ++ H ++K GL + NA++ Y+KC +I A
Sbjct: 474 AFTFASLLSGVANVGSIRKG--EQIHSQVVKLGL---SCNQPVCNALISMYSKCGSIDTA 528
Query: 513 FNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFP 572
VF + +E RN++++ +I+G+A G A IRV
Sbjct: 529 SRVF-NFMENRNVISWTSMITGFAKHGFA---------------------IRV------- 559
Query: 573 NQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASV-----HLLRQCHGYVIRACFDGVRL 627
L F ++ +G+KP+ VT +++L CS + V H + I+ +
Sbjct: 560 ---LETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY-- 614
Query: 628 NGALLHLYAKCGSIFSASKIFQCHP-QKDVVMLTAMIGGYAMHG---MGKAALKVFSDML 683
++ L + G + A + P Q DV++ +G +H +GK A + +L
Sbjct: 615 -ACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAAR---KIL 670
Query: 684 ELGVN-PDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIK 724
EL N P + + + AC AG +E E+ R +++ +K
Sbjct: 671 ELDPNEPAAYIQLSNIYAC--AGKWEESTEMRRKMKERNLVK 710
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 192/370 (51%), Gaps = 14/370 (3%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M+E N +W +I + G +EA+ F + S + S+V +C L ++
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG--FESDKFTLSSVFSACAELENLS 286
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKC---GVIDDCYKLFGQVDNTDPVTWNILLS 117
LGK LH + + G + V +L+++YAKC G +DDC K+F ++++ ++W L++
Sbjct: 287 LGKQLHSWAIRSGLV--DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALIT 344
Query: 118 GFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGL 177
G+ + +NLF M + +PN T + AC L GK + K GL
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL 404
Query: 178 ERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSW 237
++ V NS+ SM+ K + DA F+S+ +K++VS+N + G N AF+L S
Sbjct: 405 ASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSE 464
Query: 238 MLTEPIKPNYATILNILPICASLDEDVGYFF-GREIHCYVLRRAELIADVSVCNALVSFY 296
+ + + T ++L A +VG G +IH V++ L + VCNAL+S Y
Sbjct: 465 ITERELGVSAFTFASLLSGVA----NVGSIRKGEQIHSQVVKLG-LSCNQPVCNALISMY 519
Query: 297 LRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTL 356
+ G + A +F M++R+++SW ++I G+A + ++ L F ++I +E + P+ VT
Sbjct: 520 SKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI-EEGVKPNEVTY 578
Query: 357 VSLLPACAYL 366
V++L AC+++
Sbjct: 579 VAILSACSHV 588
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 116/225 (51%), Gaps = 14/225 (6%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
++E N S+ T ++G CR+ ++A L + + V + F+++L ++ I
Sbjct: 434 LSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV--SAFTFASLLSGVANVGSIR 491
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
G+ +H V KLG Q V AL+++Y+KCG ID ++F ++N + ++W +++GFA
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAG----KSLHA-YVIKF 175
H RV+ F N + + KPN VT +LSAC+ +G + G S++ + IK
Sbjct: 552 -KHGFAIRVLETF-NQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKP 609
Query: 176 GLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIE-DKDVVSWNAVI 219
+E + + + + GL+ DA+ +++ DV+ W +
Sbjct: 610 KMEHYAC----MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 350 bits (898), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 201/642 (31%), Positives = 343/642 (53%), Gaps = 76/642 (11%)
Query: 270 REIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYAS 329
+++H +R L + + ++S Y EA LLF+ +KS +++W ++I +
Sbjct: 25 KQLHAQFIRTQSL--SHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82
Query: 330 NDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDA 389
+ KAL F E+ PD S+L +C + +L+ G+ +HG+ +R ++ D
Sbjct: 83 QSLFSKALASFVEMRASGRC-PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG-MDCDL 140
Query: 390 AVGNALVSFYAKCSDM------------------------------------EAAYRTFL 413
GNAL++ YAK M ++ R F
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFE 200
Query: 414 MICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGM 473
++ R+D++S+N+++ +++SG L ++ M ++PDS T+ +++ + +
Sbjct: 201 VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIK 260
Query: 474 VKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVIS 533
KE HGY+I+ G+ D++ IG++++D YAK I
Sbjct: 261 GKEIHGYVIRKGI---DSDVYIGSSLVDMYAKSARI------------------------ 293
Query: 534 GYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVT 593
+++ FSR+Y RD WN ++ Y +N N+AL LF ++ +KP AV
Sbjct: 294 --------EDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 594 IMSLLPVCSQMASVHLLRQCHGYVIRACF-DGVRLNGALLHLYAKCGSIFSASKIFQCHP 652
S++P C+ +A++HL +Q HGYV+R F + + AL+ +Y+KCG+I +A KIF
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 653 QKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLE 712
D V TA+I G+A+HG G A+ +F +M GV P+ V AVL+ACSH GLVDE
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 465
Query: 713 IFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIH 772
F S+ KV G+ E YA++ DLL R G++ +AY+ +++M VE +VW TLL +C +H
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Query: 773 HEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSW 832
+EL VA ++F ++++N+G YV+M N+YA++ RW + ++R M+ + L+K ACSW
Sbjct: 526 KNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSW 585
Query: 833 IEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIKDQVTISE 874
IE++ K + F++GD SHP D I L + EQ++ + +++
Sbjct: 586 IEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVAD 627
Score = 207 bits (526), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 152/615 (24%), Positives = 298/615 (48%), Gaps = 67/615 (10%)
Query: 45 LFSAVLKSCTSLADILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQV 104
L ++K+ T + K LH + +S + S ++++Y ++ + LF +
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEALLLFKTL 65
Query: 105 DNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFA 164
+ + W ++ F + ++ + F M + P+ VL +C + +
Sbjct: 66 KSPPVLAWKSVIRCFTDQSLF-SKALASFVEMRASGRC-PDHNVFPSVLKSCTMMMDLRF 123
Query: 165 GKSLHAYVIKFGLERHTLVGNSLTSMYAKR---------GLVHD---------------- 199
G+S+H ++++ G++ GN+L +MYAK G V D
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183
Query: 200 -----------AYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYA 248
VF+ + KDVVS+N +I+G +++ + DA R+ M T +KP+
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF 243
Query: 249 TILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELL 308
T+ ++LPI E V G+EIH YV+R+ + +DV + ++LV Y + R E++E +
Sbjct: 244 TLSSVLPI---FSEYVDVIKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 309 FRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKN 368
F R+ RD +SWN+++AGY N + +AL LF +++T + + P +V S++PACA+L
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAK-VKPGAVAFSSVIPACAHLAT 358
Query: 369 LKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLD 428
L +GK++HGY LR + + + +ALV Y+KC +++AA + F + D +SW +++
Sbjct: 359 LHLGKQLHGYVLRGGF-GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417
Query: 429 AFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGY---LIKTG 485
+ G+ + ++L M +G++P+ + + ++ C+ V G+V E GY + K
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV---GLVDEAWGYFNSMTKVY 474
Query: 486 LLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISG---YANCGSAD 542
L + EH A+ D + ++ A+N + + ++ ++S + N A+
Sbjct: 475 GLNQELEHYA--AVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAE 532
Query: 543 EAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCS 602
+ + + ++ + LM +YA N + L L+++ +G++ P CS
Sbjct: 533 KVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKK--------PACS 584
Query: 603 QMASVHLLRQCHGYV 617
+ + + HG+V
Sbjct: 585 W---IEMKNKTHGFV 596
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 237/476 (49%), Gaps = 62/476 (13%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
+ P +W ++I F L +AL+ F E+++S +H +F +VLKSCT + D+
Sbjct: 65 LKSPPVLAWKSVIRCFTDQSLFSKALASFV-EMRASGRCP-DHNVFPSVLKSCTMMMDLR 122
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAK-CGV-------------------------- 93
G+++HG++ +LG AL+N+YAK G+
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182
Query: 94 ---------IDDCYKLFGQVDNTDPVTWNILLSGFACSHV-DDARVMNLFYNMHVRDQPK 143
ID ++F + D V++N +++G+A S + +DA + + M D K
Sbjct: 183 AETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDA--LRMVREMGTTDL-K 239
Query: 144 PNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSV 203
P+S T++ VL + + GK +H YVI+ G++ +G+SL MYAK + D+ V
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 204 FDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDED 263
F + +D +SWN++++G +N +A RLF M+T +KP +++P CA L
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL--- 356
Query: 264 VGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAI 323
G+++H YVL R +++ + +ALV Y + G + A +F RM D VSW AI
Sbjct: 357 ATLHLGKQLHGYVL-RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAI 415
Query: 324 IAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYF--LR 381
I G+A + +A++LF E+ ++ + P+ V V++L AC++ + + E GYF +
Sbjct: 416 IMGHALHGHGHEAVSLFEEM-KRQGVKPNQVAFVAVLTACSH---VGLVDEAWGYFNSMT 471
Query: 382 HPY-----LEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLIS-WNSMLDAFS 431
Y LE AAV + L + +E AY +C S W+++L + S
Sbjct: 472 KVYGLNQELEHYAAVADLL----GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 195/424 (45%), Gaps = 29/424 (6%)
Query: 358 SLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICR 417
+L+ +K+ K++H F+R L +A + ++S Y + A F +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSA--SIVISIYTNLKLLHEALLLFKTLKS 67
Query: 418 RDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKET 477
+++W S++ F++ S+ L M G PD +++ CT ++ +
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 478 HGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYAN 537
HG++++ G+ D + GNA+++ YAK + +V F+ + +N
Sbjct: 128 HGFIVRLGM---DCDLYTGNALMNMYAKLLGMGSKISVGN---------VFDEMPQRTSN 175
Query: 538 CG----SADEAFMTFS-----RIYA----RDLTPWNLMIRVYAENDFPNQALSLFLKLQA 584
G A+ M F R++ +D+ +N +I YA++ AL + ++
Sbjct: 176 SGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGT 235
Query: 585 QGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDG-VRLNGALLHLYAKCGSIFS 643
+KPD+ T+ S+LP+ S+ V ++ HGYVIR D V + +L+ +YAK I
Sbjct: 236 TDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIED 295
Query: 644 ASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSH 703
+ ++F +D + +++ GY +G AL++F M+ V P V ++V+ AC+H
Sbjct: 296 SERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAH 355
Query: 704 AGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWG 763
+ G ++ + + G ++LVD+ ++ G I A + +RM V + +
Sbjct: 356 LATLHLGKQLHGYVLR-GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTA 414
Query: 764 TLLG 767
++G
Sbjct: 415 IIMG 418
Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 159/359 (44%), Gaps = 67/359 (18%)
Query: 8 SWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHG 67
SW +++ G+ ++G + EAL LF + + V+ FS+V+ +C LA + LGK LHG
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMV--TAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367
Query: 68 YVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDA 127
YV + G S ++ AL+++Y+KCG I K+F +++ D V+W ++ G A H
Sbjct: 368 YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL-HGHGH 426
Query: 128 RVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSL 187
++LF M R KPN V VL+AC+ +
Sbjct: 427 EAVSLFEEMK-RQGVKPNQVAFVAVLTACSHV---------------------------- 457
Query: 188 TSMYAKRGLVHDAYSVFDSIE-----DKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEP 242
GLV +A+ F+S+ ++++ + AV L L +A+ S M EP
Sbjct: 458 -------GLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEP 510
Query: 243 IKPNYATILNILPICASLD--EDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFG 300
++T+L+ + +L+ E V + + + A V +CN Y G
Sbjct: 511 TGSVWSTLLSSCSVHKNLELAEKVAE------KIFTVDSENMGAYVLMCN----MYASNG 560
Query: 301 RTEEAELLFRRMKSRDL-----VSWNAI---IAGYASNDE---WLKALNLFCELITKEM 348
R +E L RM+ + L SW + G+ S D + +N F + + ++M
Sbjct: 561 RWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM 619
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 350 bits (898), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 217/729 (29%), Positives = 386/729 (52%), Gaps = 65/729 (8%)
Query: 145 NSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVF 204
+ VT+ + L AC G + G +H + G V N++ MY K G +A +F
Sbjct: 77 DEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 205 DSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDV 264
+++ D DVVSWN ++SG +N++ A M + + + T L C +
Sbjct: 135 ENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSE--- 188
Query: 265 GYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAII 324
G+ G ++ V++ L +D+ V N+ ++ Y R G A +F M +D++SWN+++
Sbjct: 189 GFLLGLQLQSTVVKTG-LESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLL 247
Query: 325 AGYASNDEW-LKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHP 383
+G + + +A+ +F +++ +E + D V+ S++ C + +LK+ ++IHG ++
Sbjct: 248 SGLSQEGTFGFEAVVIFRDMM-REGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRG 306
Query: 384 YLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLL 443
Y E VGN L+S Y+KC +EA F + R+++SW +M+ + + S FLN
Sbjct: 307 Y-ESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAV-SIFLN-- 362
Query: 444 NCMLMEGIRPDSITILTIIHF--CTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILD 501
M +G+ P+ +T + +I+ C ++EG+ + HG IKTG + +E ++GN+ +
Sbjct: 363 --MRFDGVYPNEVTFVGLINAVKCNEQIKEGL--KIHGLCIKTGFV---SEPSVGNSFIT 415
Query: 502 AYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNL 561
YAK F++L ++A F I R++ WN
Sbjct: 416 LYAK----------FEAL----------------------EDAKKAFEDITFREIISWNA 443
Query: 562 MIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCS--QMASVHLLRQCHGYVIR 619
MI +A+N F ++AL +FL A+ M P+ T S+L + + SV ++CH ++++
Sbjct: 444 MISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK 502
Query: 620 ACFDGVRL-NGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKV 678
+ + + ALL +YAK G+I + K+F QK+ + T++I Y+ HG + + +
Sbjct: 503 LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNL 562
Query: 679 FSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLA 738
F M++ V PD V +VL+AC+ G+VD+G EIF + +V ++P+ E Y+ +VD+L
Sbjct: 563 FHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLG 622
Query: 739 RGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVV 798
R G++ +A L++ +P ++ ++LG+CR+H V++G VA EM+ + G+YV
Sbjct: 623 RAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQ 682
Query: 799 MSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNA-----FMAGDYSHPRRD 853
M N+YA WD EIRK M+ +++ K A SWI+V + F +GD SHP+ D
Sbjct: 683 MYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSD 742
Query: 854 MIYWVLSIL 862
IY ++ I+
Sbjct: 743 EIYRMVEII 751
Score = 227 bits (578), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 188/684 (27%), Positives = 329/684 (48%), Gaps = 93/684 (13%)
Query: 25 ALSLFAHELQSSPSVRHNHQL-FSAVLKSCTSLADILLGKALHGYVTKLGHISCQAVSKA 83
ALS+F LQ RH ++ LK+C D+ G +HG+ T G S VS A
Sbjct: 59 ALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNA 116
Query: 84 LLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPK 143
++ +Y K G D+ +F + + D V+WN +LSGF DD ++ N VR +
Sbjct: 117 VMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF-----DDNQIA---LNFVVRMKSA 168
Query: 144 P---NSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDA 200
++ T + LS C G G L + V+K GLE +VGNS +MY++ G A
Sbjct: 169 GVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGA 228
Query: 201 YSVFDSIEDKDVVSWNAVISGLSENKVLG-DAFRLFSWMLTEPIKPNYATILNILPICAS 259
VFD + KD++SWN+++SGLS+ G +A +F M+ E ++ ++ + +++ C
Sbjct: 229 RRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCC- 287
Query: 260 LDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVS 319
+ R+IH ++R + + V N L+S Y + G E + +F +M R++VS
Sbjct: 288 --HETDLKLARQIHGLCIKRG-YESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVS 344
Query: 320 WNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYF 379
W +I +SN + A+++F + + ++P+ VT V L+ A + +K G +IHG
Sbjct: 345 WTTMI---SSNKD--DAVSIFLNM-RFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLC 398
Query: 380 LRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQF 439
++ ++ E +VGN+ ++ YAK +E A + F I R++ISWN+M+ F+++G++ +
Sbjct: 399 IKTGFVSE-PSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEA 457
Query: 440 LNLLNCMLMEGIRPDSIT---ILTIIHFCTTV-LREGMVKETHGYLIKTGLLLGDTEHNI 495
L + E + P+ T +L I F + +++G + H +L+K GL ++ +
Sbjct: 458 LKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQG--QRCHAHLLKLGL---NSCPVV 511
Query: 496 GNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARD 555
+A+LD YAK NI + VF + +K V + +IS Y++ G
Sbjct: 512 SSALLDMYAKRGNIDESEKVFNEMSQKNQFV-WTSIISAYSSHG---------------- 554
Query: 556 LTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQ------------ 603
DF ++LF K+ + + PD VT +S+L C++
Sbjct: 555 --------------DFET-VMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFN 599
Query: 604 -MASVHLLRQCHGYVIRACFDGVRLNGALLHLYAKCGSIFSASKIFQCHP-QKDVVMLTA 661
M V+ L H + +C ++ + + G + A ++ P ML +
Sbjct: 600 MMIEVYNLEPSHEHY--SC---------MVDMLGRAGRLKEAEELMSEVPGGPGESMLQS 648
Query: 662 MIGGYAMHGMGKAALKVFSDMLEL 685
M+G +HG K KV +E+
Sbjct: 649 MLGSCRLHGNVKMGAKVAELAMEM 672
Score = 183 bits (465), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 240/484 (49%), Gaps = 25/484 (5%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
+ +P+ SW TI++GF + + AL+ S V + +S L C L
Sbjct: 137 LVDPDVVSWNTILSGFDDNQI---ALNFVVR--MKSAGVVFDAFTYSTALSFCVGSEGFL 191
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
LG L V K G S V + + +Y++ G ++F ++ D ++WN LLSG +
Sbjct: 192 LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLS 251
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
+ +F +M +R+ + + V+ V++ C + + +H IK G E
Sbjct: 252 QEGTFGFEAVVIFRDM-MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESL 310
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT 240
VGN L S Y+K G++ SVF + +++VVSW +I S NK DA +F M
Sbjct: 311 LEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI---SSNK--DDAVSIFLNMRF 365
Query: 241 EPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFG 300
+ + PN T + ++ +E + G +IH ++ +++ SV N+ ++ Y +F
Sbjct: 366 DGVYPNEVTFVGLIN-AVKCNEQIKE--GLKIHGLCIKTG-FVSEPSVGNSFITLYAKFE 421
Query: 301 RTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLL 360
E+A+ F + R+++SWNA+I+G+A N +AL +F + M P+ T S+L
Sbjct: 422 ALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM--PNEYTFGSVL 479
Query: 361 PACAYLKNLKV--GKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRR 418
A A+ +++ V G+ H + L+ L V +AL+ YAK +++ + + F + ++
Sbjct: 480 NAIAFAEDISVKQGQRCHAHLLKLG-LNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK 538
Query: 419 DLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETH 478
+ W S++ A+S G +NL + M+ E + PD +T L+++ C R+GMV +
Sbjct: 539 NQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACN---RKGMVDK-- 593
Query: 479 GYLI 482
GY I
Sbjct: 594 GYEI 597
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 8 SWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILL--GKAL 65
SW +I+GF ++G EAL +F L ++ N F +VL + DI + G+
Sbjct: 440 SWNAMISGFAQNGFSHEALKMF---LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRC 496
Query: 66 HGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVD 125
H ++ KLG SC VS ALL++YAK G ID+ K+F ++ + W ++S ++ SH D
Sbjct: 497 HAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYS-SHGD 555
Query: 126 DARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIK-FGLERHTLVG 184
VMNLF+ M +++ P+ VT VL+AC R G + G + +I+ + LE
Sbjct: 556 FETVMNLFHKM-IKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHY 614
Query: 185 NSLTSMYAKRGLVHDAYSVFDSI 207
+ + M + G + +A + +
Sbjct: 615 SCMVDMLGRAGRLKEAEELMSEV 637
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 345 bits (886), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 213/721 (29%), Positives = 365/721 (50%), Gaps = 53/721 (7%)
Query: 139 RDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVH 198
+ + P++ T+ L+ ++ + AG+++H +I+ G N L + YAK G +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 199 DAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAF---RLFSWMLTEPIKPNYATILNILP 255
A+S+F++I KDVVSWN++I+G S+N + ++ +LF M + I PN T+ I
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 256 ICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSR 315
+SL GR+ H V++ + D+ V +LV Y + G E+ +F M R
Sbjct: 127 AESSLQSST---VGRQAHALVVKMSSF-GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 316 DLVSWNAIIAGYASN---DEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVG 372
+ +W+ +++GYA+ +E +K NLF L KE ++L + A + +G
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLF--LREKEEGSDSDYVFTAVLSSLAATIYVGLG 240
Query: 373 KEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSE 432
++IH +++ L A+ NALV+ Y+KC + A + F R+ I+W++M+ +S+
Sbjct: 241 RQIHCITIKNGLLG-FVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ 299
Query: 433 SGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTV--LREGMVKETHGYLIKTGLLLGD 490
+G + + + L + M GI+P TI+ +++ C+ + L EG K+ H +L+K G
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEG--KQLHSFLLKLGF---- 353
Query: 491 TEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSR 550
+R+L ++ YA G +A F
Sbjct: 354 -------------------------------ERHLFATTALVDMYAKAGCLADARKGFDC 382
Query: 551 IYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLL 610
+ RD+ W +I Y +N +AL L+ +++ G+ P+ T+ S+L CS +A++ L
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Query: 611 RQCHGYVIRACFD-GVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMH 669
+Q HG+ I+ F V + AL +Y+KCGS+ + +F+ P KDVV AMI G + +
Sbjct: 443 KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHN 502
Query: 670 GMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQ 729
G G AL++F +ML G+ PD V ++SACSH G V+ G F + G+ P +
Sbjct: 503 GQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDH 562
Query: 730 YASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEME 789
YA +VDLL+R GQ+ +A + ++ +W LL AC+ H + ELG +L +
Sbjct: 563 YACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALG 622
Query: 790 ADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSH 849
+ YV +S +Y A R V + K M+ + K CSWIE++ + + F+ GD H
Sbjct: 623 SRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMH 682
Query: 850 P 850
P
Sbjct: 683 P 683
Score = 237 bits (604), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 157/552 (28%), Positives = 278/552 (50%), Gaps = 42/552 (7%)
Query: 58 DILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLS 117
+++ G+A+HG + + G +C + L+N YAKCG + + +F + D V+WN L++
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 118 GFACSH--VDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKF 175
G++ + VM LF M +D PN+ T+A + A + L G+ HA V+K
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQD-ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKM 147
Query: 176 GLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLF 235
V SL MY K GLV D VF + +++ +W+ ++SG + + +A ++F
Sbjct: 148 SSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 236 SWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSF 295
+ L E + + + + + +SL + GR+IHC ++ L+ V++ NALV+
Sbjct: 208 NLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNG-LLGFVALSNALVTM 265
Query: 296 YLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVT 355
Y + EA +F R+ ++W+A++ GY+ N E L+A+ LF + + I P T
Sbjct: 266 YSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG-IKPSEYT 324
Query: 356 LVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMI 415
+V +L AC+ + L+ GK++H + L+ + E ALV YAK + A + F +
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGF-ERHLFATTALVDMYAKAGCLADARKGFDCL 383
Query: 416 CRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVK 475
RD+ W S++ + ++ N + L L M GI P+ T+ +++ C+++ + K
Sbjct: 384 QERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGK 443
Query: 476 ETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGY 535
+ HG+ IK G L E IG+A+ Y+KC +++ VF+ K ++V++N +ISG
Sbjct: 444 QVHGHTIKHGFGL---EVPIGSALSTMYSKCGSLEDGNLVFRRTPNK-DVVSWNAMISGL 499
Query: 536 ANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIM 595
++ G DE AL LF ++ A+GM+PD VT +
Sbjct: 500 SHNGQGDE-------------------------------ALELFEEMLAEGMEPDDVTFV 528
Query: 596 SLLPVCSQMASV 607
+++ CS V
Sbjct: 529 NIISACSHKGFV 540
Score = 224 bits (570), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 252/464 (54%), Gaps = 15/464 (3%)
Query: 8 SWITIINGFCRDGLHKEALSLFA--HELQSSPSVRHNHQLFSAVLKSCTSLADILLGKAL 65
SW ++I G+ ++G + ++ E+++ + N + + K+ +SL +G+
Sbjct: 82 SWNSLITGYSQNGGISSSYTVMQLFREMRAQ-DILPNAYTLAGIFKAESSLQSSTVGRQA 140
Query: 66 HGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFAC-SHV 124
H V K+ V +L+ +Y K G+++D K+F + + TW+ ++SG+A V
Sbjct: 141 HALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRV 200
Query: 125 DDA-RVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLV 183
++A +V NLF + +++ + VLS+ A + G+ +H IK GL +
Sbjct: 201 EEAIKVFNLF--LREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVAL 258
Query: 184 GNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPI 243
N+L +MY+K +++A +FDS D++ ++W+A+++G S+N +A +LFS M + I
Sbjct: 259 SNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGI 318
Query: 244 KPNYATILNILPICASLDEDVGYF-FGREIHCYVLRRAELIADVSVCNALVSFYLRFGRT 302
KP+ TI+ +L C+ D+ Y G+++H ++L+ + ALV Y + G
Sbjct: 319 KPSEYTIVGVLNACS----DICYLEEGKQLHSFLLKLG-FERHLFATTALVDMYAKAGCL 373
Query: 303 EEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPA 362
+A F ++ RD+ W ++I+GY N + +AL L+ + T +I P+ T+ S+L A
Sbjct: 374 ADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII-PNDPTMASVLKA 432
Query: 363 CAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLIS 422
C+ L L++GK++HG+ ++H + E +G+AL + Y+KC +E F +D++S
Sbjct: 433 CSSLATLELGKQVHGHTIKHGFGLE-VPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS 491
Query: 423 WNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCT 466
WN+M+ S +G + L L ML EG+ PD +T + II C+
Sbjct: 492 WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACS 535
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 206/365 (56%), Gaps = 7/365 (1%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E N +W T+++G+ G +EA+ +F L+ + +F+AVL S + +
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
LG+ +H K G + A+S AL+ +Y+KC +++ K+F + + +TW+ +++G++
Sbjct: 239 LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
+ + + LF M KP+ T+ VL+AC+ + + GK LH++++K G ERH
Sbjct: 299 -QNGESLEAVKLFSRM-FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH 356
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT 240
+L MYAK G + DA FD ++++DV W ++ISG +N +A L+ M T
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT 416
Query: 241 EPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFG 300
I PN T+ ++L C+SL G+++H + ++ +V + +AL + Y + G
Sbjct: 417 AGIIPNDPTMASVLKACSSL---ATLELGKQVHGHTIKHG-FGLEVPIGSALSTMYSKCG 472
Query: 301 RTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLL 360
E+ L+FRR ++D+VSWNA+I+G + N + +AL LF E++ + M PD VT V+++
Sbjct: 473 SLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGM-EPDDVTFVNII 531
Query: 361 PACAY 365
AC++
Sbjct: 532 SACSH 536
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 236/732 (32%), Positives = 371/732 (50%), Gaps = 74/732 (10%)
Query: 107 TDPVTWNILLSGF-----ACSHVD-DARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLG 160
T P+T LS F +C H + + + +F ++ +R PN T++I L A
Sbjct: 4 TKPITLYRDLSYFHSLLKSCIHGEISSSPITIFRDL-LRSSLTPNHFTMSIFLQATTTSF 62
Query: 161 GIFAGK--SLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAV 218
F + + ++ K GL+R V SL ++Y K+G V A +FD + ++D V WNA+
Sbjct: 63 NSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNAL 122
Query: 219 ISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFF-GREIHCYVL 277
I G S N DA++LF ML + P+ T++N+LP C G+ GR +H V
Sbjct: 123 ICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCG----QCGFVSQGRSVH-GVA 177
Query: 278 RRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKAL 337
++ L D V NAL+SFY + AE+LFR MK + VSWN +I Y+ + +A+
Sbjct: 178 AKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAI 237
Query: 338 NLFCELITKEM-IWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALV 396
+F + K + I P VT+++LL A V E + + D +V +LV
Sbjct: 238 TVFKNMFEKNVEISP--VTIINLLSA-------HVSHEPLHCLVVKCGMVNDISVVTSLV 288
Query: 397 SFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESG-------YNSQFLNLLNCMLME 449
Y++C + +A R + + ++ S++ ++E G Y S+ L CM
Sbjct: 289 CAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQL--CM--- 343
Query: 450 GIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNI 509
+ D++ ++ I+H C + HGY IK+GL T+ + N ++ Y+K ++
Sbjct: 344 --KIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLC---TKTLVVNGLITMYSKFDDV 398
Query: 510 KYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAEN 569
+ +F+ L E L+++N VISG G A AF F ++
Sbjct: 399 ETVLFLFEQLQETP-LISWNSVISGCVQSGRASTAFEVFHQM------------------ 439
Query: 570 DFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDGVR-LN 628
+ G+ PDA+TI SLL CSQ+ ++L ++ HGY +R F+ +
Sbjct: 440 ------------MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVC 487
Query: 629 GALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVN 688
AL+ +YAKCG+ A +F+ +MI GY++ G+ AL + +M E G+
Sbjct: 488 TALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLK 547
Query: 689 PDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYS 748
PD + VLSAC+H G VDEG FR++ K GI PT + YA +V LL R ++A
Sbjct: 548 PDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALY 607
Query: 749 LVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADAR 808
L+ +M ++ D VWG LL AC IH E+E+G VA ++F ++ N G YV+MSNLYA +A
Sbjct: 608 LIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAM 667
Query: 809 WDGVVEIRKLMK 820
WD VV +R +MK
Sbjct: 668 WDDVVRVRNMMK 679
Score = 211 bits (536), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 164/602 (27%), Positives = 286/602 (47%), Gaps = 64/602 (10%)
Query: 32 ELQSSP----------SVRHNHQLFSAVLKSCTSLADI--LLGKALHGYVTKLGHISCQA 79
E+ SSP S+ NH S L++ T+ + L + + ++TK G
Sbjct: 27 EISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVY 86
Query: 80 VSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVR 139
V +LLNLY K G + LF ++ D V WN L+ G++ + + LF M ++
Sbjct: 87 VKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS-RNGYECDAWKLFIVM-LQ 144
Query: 140 DQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHD 199
P++ T+ +L C + G + G+S+H K GLE + V N+L S Y+K +
Sbjct: 145 QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGS 204
Query: 200 AYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICAS 259
A +F ++DK VSWN +I S++ + +A +F M + ++ + TI+N+L S
Sbjct: 205 AEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS 264
Query: 260 LDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVS 319
+ +HC V+ + ++ D+SV +LV Y R G AE L+ K +V
Sbjct: 265 HE---------PLHCLVV-KCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVG 314
Query: 320 WNAIIAGYASNDEWLKALNLFCELITKEMIWP-DSVTLVSLLPACAYLKNLKVGKEIHGY 378
+I++ YA + A+ F + T+++ D+V LV +L C ++ +G +HGY
Sbjct: 315 LTSIVSCYAEKGDMDIAVVYFSK--TRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGY 372
Query: 379 FLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQ 438
++ + V N L++ Y+K D+E F + LISWNS++ +SG S
Sbjct: 373 AIKSGLCTKTLVV-NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRAST 431
Query: 439 FLNLLNCMLME-GIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGN 497
+ + M++ G+ PD+ITI +++ C+ + + KE HGY ++ + E+ +
Sbjct: 432 AFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF---ENENFVCT 488
Query: 498 AILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLT 557
A++D YAKC N A +VF+S I A
Sbjct: 489 ALIDMYAKCGNEVQAESVFKS--------------------------------IKAPCTA 516
Query: 558 PWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYV 617
WN MI Y+ + ++ALS +L+++ +G+KPD +T + +L C+ V + C +
Sbjct: 517 TWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAM 576
Query: 618 IR 619
I+
Sbjct: 577 IK 578
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 223/468 (47%), Gaps = 21/468 (4%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQS--SPSVRHNHQLFSAVLKSCTSLAD 58
M E + W +I G+ R+G +A LF LQ SPS +L C
Sbjct: 111 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSA----TTLVNLLPFCGQCGF 166
Query: 59 ILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSG 118
+ G+++HG K G V AL++ Y+KC + LF ++ + V+WN ++
Sbjct: 167 VSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGA 226
Query: 119 FACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLE 178
++ S + + + +F NM ++ + + VT+ +LSA + + LH V+K G+
Sbjct: 227 YSQSGLQE-EAITVFKNMFEKN-VEISPVTIINLLSAHV------SHEPLHCLVVKCGMV 278
Query: 179 RHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWM 238
V SL Y++ G + A ++ S + +V +++S +E + A FS
Sbjct: 279 NDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKT 338
Query: 239 LTEPIKPNYATILNILPICA-SLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYL 297
+K + ++ IL C S D+G +H Y ++ L V N L++ Y
Sbjct: 339 RQLCMKIDAVALVGILHGCKKSSHIDIG----MSLHGYAIKSG-LCTKTLVVNGLITMYS 393
Query: 298 RFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLV 357
+F E LF +++ L+SWN++I+G + A +F +++ + PD++T+
Sbjct: 394 KFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIA 453
Query: 358 SLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICR 417
SLL C+ L L +GKE+HGY LR+ + E + V AL+ YAKC + A F I
Sbjct: 454 SLLAGCSQLCCLNLGKELHGYTLRNNF-ENENFVCTALIDMYAKCGNEVQAESVFKSIKA 512
Query: 418 RDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFC 465
+WNSM+ +S SG + L+ M +G++PD IT L ++ C
Sbjct: 513 PCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSAC 560
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 4/178 (2%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
+ E SW ++I+G + G A +F H++ + + + +++L C+ L +
Sbjct: 408 LQETPLISWNSVISGCVQSGRASTAFEVF-HQMMLTGGLLPDAITIASLLAGCSQLCCLN 466
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
LGK LHGY + + V AL+++YAKCG +F + TWN ++SG++
Sbjct: 467 LGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYS 526
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGK-SLHAYVIKFGL 177
S + R ++ + M + KP+ +T VLSAC G + GK A + +FG+
Sbjct: 527 LSGLQH-RALSCYLEMREKGL-KPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGI 582
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 221/810 (27%), Positives = 411/810 (50%), Gaps = 47/810 (5%)
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
+G +H V K G + + LL+LY K I + KLF ++ + W +++S F
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
S + A ++LF M + PN T + V+ +CA L I G +H VIK G E +
Sbjct: 101 KSQ-EFASALSLFEEM-MASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGN 158
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT 240
++VG+SL+ +Y+K G +A +F S+++ D +SW +IS L + +A + +S M+
Sbjct: 159 SVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVK 218
Query: 241 EPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFG 300
+ PN T + +L + L G FG+ IH ++ R + +V + +LV FY +F
Sbjct: 219 AGVPPNEFTFVKLLGASSFL----GLEFGKTIHSNIIVRG-IPLNVVLKTSLVDFYSQFS 273
Query: 301 RTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLL 360
+ E+A + +D+ W ++++G+ N +A+ F E+ + + P++ T ++L
Sbjct: 274 KMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGL-QPNNFTYSAIL 332
Query: 361 PACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEA-AYRTFLMICRRD 419
C+ +++L GK+IH ++ + E+ VGNALV Y KCS E A R F + +
Sbjct: 333 SLCSAVRSLDFGKQIHSQTIKVGF-EDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPN 391
Query: 420 LISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHG 479
++SW +++ + G+ LL M+ + P+ +T+ ++ C+ + V E H
Sbjct: 392 VVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHA 451
Query: 480 YLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCG 539
YL++ + D E +GN+++DAYA R + YA+NV +S +++R+ +T+ +++ + G
Sbjct: 452 YLLRRHV---DGEMVVGNSLVDAYASSRKVDYAWNVIRS-MKRRDNITYTSLVTRFNELG 507
Query: 540 SADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLP 599
+ ALS+ + G++ D +++ +
Sbjct: 508 KHE-------------------------------MALSVINYMYGDGIRMDQLSLPGFIS 536
Query: 600 VCSQMASVHLLRQCHGYVIRACFDG-VRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVM 658
+ + ++ + H Y +++ F G + +L+ +Y+KCGS+ A K+F+ DVV
Sbjct: 537 ASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVS 596
Query: 659 LTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIE 718
++ G A +G +AL F +M PD V +LSACS+ L D GLE F+ ++
Sbjct: 597 WNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMK 656
Query: 719 KVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELG 778
K+ I+P E Y LV +L R G++ +A +V M ++ + ++ TLL ACR + LG
Sbjct: 657 KIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLG 716
Query: 779 RVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERK 838
+AN+ + + Y+++++LY + + + R LM + L K S +EV+ K
Sbjct: 717 EDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGK 776
Query: 839 NNAFMAGDYSH-PRRDMIYWVLSILDEQIK 867
++F++ D + + + IY + + E+IK
Sbjct: 777 VHSFVSEDVTRVDKTNGIYAEIESIKEEIK 806
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 206/758 (27%), Positives = 346/758 (45%), Gaps = 89/758 (11%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M+ +W +I+ F + ALSLF + S N FS+V++SC L DI
Sbjct: 84 MSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASG--THPNEFTFSSVVRSCAGLRDIS 141
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
G +HG V K G V +L +LY+KCG + +LF + N D ++W +++S
Sbjct: 142 YGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLV 201
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
+ R FY+ V+ PN T +L A + LG F GK++H+ +I G+ +
Sbjct: 202 GAR--KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEF-GKTIHSNIIVRGIPLN 258
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT 240
++ SL Y++ + DA V +S ++DV W +V+SG N +A F M +
Sbjct: 259 VVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRS 318
Query: 241 EPIKPNYATILNILPICA---SLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYL 297
++PN T IL +C+ SLD FG++IH ++ V NALV Y+
Sbjct: 319 LGLQPNNFTYSAILSLCSAVRSLD------FGKQIHSQTIKVG-FEDSTDVGNALVDMYM 371
Query: 298 RFGRTE-EAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTL 356
+ +E EA +F M S ++VSW +I G + L E++ +E + P+ VTL
Sbjct: 372 KCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE-VEPNVVTL 430
Query: 357 VSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMIC 416
+L AC+ L++++ EIH Y LR +++ + VGN+LV YA ++ A+ +
Sbjct: 431 SGVLRACSKLRHVRRVLEIHAYLLRR-HVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK 489
Query: 417 RRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKE 476
RRD I++ S++ F+E G + L+++N M +GIR D +++ I + K
Sbjct: 490 RRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKH 549
Query: 477 THGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYA 536
H Y +K+G ++ N+++D Y+KC +++ A VF+ + ++V++N ++SG A
Sbjct: 550 LHCYSVKSGF---SGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP-DVVSWNGLVSGLA 605
Query: 537 NCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMS 596
+ N F + ALS F +++ + +PD+VT +
Sbjct: 606 S-------------------------------NGFISSALSAFEEMRMKETEPDSVTFLI 634
Query: 597 LLPVCSQMASVHLLRQCHGYVIRACFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDV 656
LL CS NG L L + + KI+ PQ V
Sbjct: 635 LLSACS-------------------------NGRLTDLGLEYFQVM--KKIYNIEPQ--V 665
Query: 657 VMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRS 716
++G G + A V M + P+ ++ +L AC + G + G ++
Sbjct: 666 EHYVHLVGILGRAGRLEEATGVVETM---HLKPNAMIFKTLLRACRYRGNLSLGEDM--- 719
Query: 717 IEKVQGIKPT-PEQYASLVDLLARGGQISDAYSLVNRM 753
K + P+ P Y L DL G+ A N M
Sbjct: 720 ANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLM 757
>sp|Q9SII7|PP159_ARATH Pentatricopeptide repeat-containing protein At2g17210
OS=Arabidopsis thaliana GN=PCMP-E77 PE=2 SV=2
Length = 736
Score = 340 bits (872), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 209/701 (29%), Positives = 361/701 (51%), Gaps = 51/701 (7%)
Query: 151 IVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDK 210
IV ACA+L +F G+ + A ++K G E VGNS+ Y K G + FD + +
Sbjct: 52 IVFKACAKLSWLFQGRCIQASLLKRGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSR 111
Query: 211 DVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGR 270
D VSWN ++ GL + + FS + +PN +T++ ++ C SL +F G
Sbjct: 112 DSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL-----WFDGE 166
Query: 271 EIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASN 330
+IH YV+R SV N+++ Y + A LF M RD++SW+ +I Y +
Sbjct: 167 KIHGYVIRSG-FCGISSVQNSILCMYAD-SDSLSARKLFDEMSERDVISWSVVIRSYVQS 224
Query: 331 DEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAA 390
E + L LF E++ + PD VT+ S+L AC ++++ VG+ +HG+ +R + D
Sbjct: 225 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 284
Query: 391 VGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEG 450
V N+L+ Y+K D+++A+R F R+++SWNS+L F + + L + + M+ E
Sbjct: 285 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA 344
Query: 451 IRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIK 510
+ D +T+++++ C + K HG +I+ G ++ ++++DAY C +
Sbjct: 345 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGY---ESNEVALSSLIDAYTSCSLVD 401
Query: 511 YAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAEND 570
A V S+ K ++V+ + +ISG A+ G +DEA F + RD
Sbjct: 402 DAGTVLDSMTYK-DVVSCSTMISGLAHAGRSDEAISIF--CHMRD--------------- 443
Query: 571 FPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACF--DGVRLN 628
P+A+T++SLL CS A + + HG IR + + +
Sbjct: 444 -----------------TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVG 486
Query: 629 GALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVN 688
+++ YAKCG+I A + F +K+++ T +I YA++G+ AL +F +M + G
Sbjct: 487 TSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYT 546
Query: 689 PDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYS 748
P+ V A LSAC+H GLV +GL IF+S+ + + KP+ + Y+ +VD+L+R G+I A
Sbjct: 547 PNAVTYLAALSACNHGGLVKKGLMIFKSMVE-EDHKPSLQHYSCIVDMLSRAGEIDTAVE 605
Query: 749 LVNRMP--VEADCNVWGTLLGACRIH-HEVELGRVVANRLFEMEADNIGNYVVMSNLYAA 805
L+ +P V+A + WG +L CR ++ + V + E+E Y++ S+ +AA
Sbjct: 606 LIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAA 665
Query: 806 DARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGD 846
+ W+ V +R+L+K R ++ A S + F+AGD
Sbjct: 666 EKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGD 706
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 155/541 (28%), Positives = 288/541 (53%), Gaps = 20/541 (3%)
Query: 20 GLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHGYVTKLGHISCQA 79
G +E +S ++ E+Q + ++ +F V K+C L+ + G+ + + K G S +
Sbjct: 25 GKWREVVSGYS-EIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRCIQASLLKRGFESFVS 83
Query: 80 VSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVR 139
V ++ + Y KCG + + F +++ D V+WN+++ G ++ L++ +R
Sbjct: 84 VGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEE---GLWWFSKLR 140
Query: 140 DQP-KPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVH 198
+PN+ T+ +V+ AC L F G+ +H YVI+ G + V NS+ MYA +
Sbjct: 141 VWGFEPNTSTLVLVIHACRSLW--FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL- 197
Query: 199 DAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTE-PIKPNYATILNILPIC 257
A +FD + ++DV+SW+ VI ++K +LF M+ E +P+ T+ ++L C
Sbjct: 198 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 257
Query: 258 ASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDL 317
+ ED+ GR +H + +RR +ADV VCN+L+ Y + + A +F R++
Sbjct: 258 TVM-EDID--VGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNI 314
Query: 318 VSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHG 377
VSWN+I+AG+ N + +AL +F L+ +E + D VT+VSLL C + + K IHG
Sbjct: 315 VSWNSILAGFVHNQRYDEALEMF-HLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 373
Query: 378 YFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNS 437
+R Y + A+ ++L+ Y CS ++ A + +D++S ++M+ + +G +
Sbjct: 374 VIIRRGYESNEVAL-SSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSD 432
Query: 438 QFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGN 497
+ +++ C + + P++IT++++++ C+ K HG I+ L + D ++G
Sbjct: 433 EAISIF-CHMRD--TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDI--SVGT 487
Query: 498 AILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLT 557
+I+DAYAKC I+ A F + EK N++++ +IS YA G D+A F + + T
Sbjct: 488 SIVDAYAKCGAIEMARRTFDQITEK-NIISWTVIISAYAINGLPDKALALFDEMKQKGYT 546
Query: 558 P 558
P
Sbjct: 547 P 547
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 124/254 (48%), Gaps = 8/254 (3%)
Query: 5 NAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKA 64
N SW +I+ GF + + EAL +F L +V + ++L+ C L K+
Sbjct: 313 NIVSWNSILAGFVHNQRYDEALEMF--HLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKS 370
Query: 65 LHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHV 124
+HG + + G+ S + +L++ Y C ++DD + + D V+ + ++SG A +
Sbjct: 371 IHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGR 430
Query: 125 DDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTL-V 183
D +++F H+RD PN++TV +L+AC+ + K H I+ L + + V
Sbjct: 431 SD-EAISIF--CHMRDT--PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISV 485
Query: 184 GNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPI 243
G S+ YAK G + A FD I +K+++SW +IS + N + A LF M +
Sbjct: 486 GTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGY 545
Query: 244 KPNYATILNILPIC 257
PN T L L C
Sbjct: 546 TPNAVTYLAALSAC 559
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 124/267 (46%), Gaps = 30/267 (11%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M + S T+I+G G EA+S+F H ++ +P N ++L +C+ AD+
Sbjct: 410 MTYKDVVSCSTMISGLAHAGRSDEAISIFCH-MRDTP----NAITVISLLNACSVSADLR 464
Query: 61 LGKALHGYVTKLG-HISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGF 119
K HG + I+ +V ++++ YAKCG I+ + F Q+ + ++W +++S +
Sbjct: 465 TSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAY 524
Query: 120 ACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLG----GIFAGKSLHAYVIKF 175
A + + D + + LF M + PN+VT LSAC G G+ KS+ K
Sbjct: 525 AINGLPD-KALALFDEMKQKGYT-PNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKP 582
Query: 176 GLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDK---DVVSWNAVISGLSENKVLGDAF 232
L+ ++ + M ++ G + A + ++ + +W A++SG
Sbjct: 583 SLQHYSCI----VDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRN-------- 630
Query: 233 RLFSWMLTEPIKPNYATILNILPICAS 259
R ++T + A +L + P+C+S
Sbjct: 631 RFKKLIITSEV---VAEVLELEPLCSS 654
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 340 bits (871), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 219/735 (29%), Positives = 368/735 (50%), Gaps = 57/735 (7%)
Query: 122 SHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHT 181
SH D +V++ F +M + ++ P++ T +L ACA L + G S+H V+ G
Sbjct: 23 SHGDHKQVLSTFSSM-LANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDF 81
Query: 182 LVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTE 241
+ +SL ++YAK GL+ A VF+ + ++DVV W A+I S ++G+A L + M +
Sbjct: 82 YISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQ 141
Query: 242 PIKPNYATILNILPICASLDE-----DVGYFFGREIHCYVLRRAELIADVSVCNALVSFY 296
IKP T+L +L + + D +G + D++V N++++ Y
Sbjct: 142 GIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFD------------CDIAVMNSMLNLY 189
Query: 297 LRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTL 356
+ +A+ LF +M+ RD+VSWN +I+GYAS + L L + + + PD T
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRM-RGDGLRPDQQTF 248
Query: 357 VSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMIC 416
+ L + +L++G+ +H ++ + + D + AL++ Y KC EA+YR I
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVKTGF-DVDMHLKTALITMYLKCGKEEASYRVLETIP 307
Query: 417 RRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKE 476
+D++ W M+ G + L + + ML G S I +++ C + +
Sbjct: 308 NKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGAS 367
Query: 477 THGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYA 536
HGY+++ G L DT N +I+ YA
Sbjct: 368 VHGYVLRHGYTL-DTP----------------------------------ALNSLITMYA 392
Query: 537 NCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKP-DAVTIM 595
CG D++ + F R+ RDL WN +I YA+N +AL LF +++ + ++ D+ T++
Sbjct: 393 KCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVV 452
Query: 596 SLLPVCSQMASVHLLRQCHGYVIRACFDGVRL-NGALLHLYAKCGSIFSASKIFQCHPQK 654
SLL CS ++ + + H VIR+ L + AL+ +Y+KCG + +A + F K
Sbjct: 453 SLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK 512
Query: 655 DVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIF 714
DVV +I GY HG G AL+++S+ L G+ P+HV+ AVLS+CSH G+V +GL+IF
Sbjct: 513 DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIF 572
Query: 715 RSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHE 774
S+ + G++P E A +VDLL R +I DA+ +V G +L ACR + +
Sbjct: 573 SSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGK 632
Query: 775 VELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIE 834
E+ ++ + E++ + G+YV + + +AA RWD V E M++ LKK S IE
Sbjct: 633 TEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIE 692
Query: 835 VERKNNAFMAGDYSH 849
+ K F SH
Sbjct: 693 MNGKTTTFFMNHTSH 707
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 161/527 (30%), Positives = 256/527 (48%), Gaps = 34/527 (6%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E + W +I + R G+ EA SL N F + +L ++L
Sbjct: 107 MRERDVVHWTAMIGCYSRAGIVGEACSLV------------NEMRFQGIKPGPVTLLEML 154
Query: 61 LG-------KALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWN 113
G + LH + G AV ++LNLY KC + D LF Q++ D V+WN
Sbjct: 155 SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWN 214
Query: 114 ILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVI 173
++SG+A S + + ++ L Y M D +P+ T LS + + G+ LH ++
Sbjct: 215 TMISGYA-SVGNMSEILKLLYRMR-GDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIV 272
Query: 174 KFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFR 233
K G + + +L +MY K G +Y V ++I +KDVV W +ISGL A
Sbjct: 273 KTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALI 332
Query: 234 LFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALV 293
+FS ML + I +++ CA L + G +H YVLR + D N+L+
Sbjct: 333 VFSEMLQSGSDLSSEAIASVVASCAQLGS---FDLGASVHGYVLRHGYTL-DTPALNSLI 388
Query: 294 SFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDS 353
+ Y + G +++ ++F RM RDLVSWNAII+GYA N + KAL LF E+ K + DS
Sbjct: 389 TMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDS 448
Query: 354 VTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFL 413
T+VSLL AC+ L VGK IH +R ++ + V ALV Y+KC +EAA R F
Sbjct: 449 FTVVSLLQACSSAGALPVGKLIHCIVIR-SFIRPCSLVDTALVDMYSKCGYLEAAQRCFD 507
Query: 414 MICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGM 473
I +D++SW ++ + G L + + L G+ P+ + L ++ C+ GM
Sbjct: 508 SISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCS---HNGM 564
Query: 474 VKETHGYLIKTGLLLG---DTEHNIGNAILDAYAKCRNIKYAFNVFQ 517
V++ G I + ++ + H ++D + + I+ AF ++
Sbjct: 565 VQQ--GLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYK 609
Score = 206 bits (523), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 156/595 (26%), Positives = 296/595 (49%), Gaps = 45/595 (7%)
Query: 13 INGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHGYVTKL 72
IN G HK+ LS F+ L + + + F ++LK+C SL + G ++H V
Sbjct: 18 INHLSSHGDHKQVLSTFSSML--ANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVN 75
Query: 73 GHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLS--------GFACSHV 124
G S +S +L+NLYAK G++ K+F ++ D V W ++ G ACS V
Sbjct: 76 GFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLV 135
Query: 125 DDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVG 184
++ R + KP VT+ +LS + + + LH + + +G + V
Sbjct: 136 NEMRFQGI----------KPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVM 182
Query: 185 NSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIK 244
NS+ ++Y K V DA +FD +E +D+VSWN +ISG + + + +L M + ++
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 245 PNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEE 304
P+ T L + ++ + GR +HC +++ D+ + AL++ YL+ G+ E
Sbjct: 243 PDQQTFGASLSVSGTMCD---LEMGRMLHCQIVKTG-FDVDMHLKTALITMYLKCGKEEA 298
Query: 305 AELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACA 364
+ + + ++D+V W +I+G KAL +F E++ S + S++ +CA
Sbjct: 299 SYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLS-SEAIASVVASCA 357
Query: 365 YLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWN 424
L + +G +HGY LRH Y + A+ N+L++ YAKC ++ + F + RDL+SWN
Sbjct: 358 QLGSFDLGASVHGYVLRHGYTLDTPAL-NSLITMYAKCGHLDKSLVIFERMNERDLVSWN 416
Query: 425 SMLDAFSESGYNSQFLNLLNCMLMEGIRP-DSITILTIIHFCTTVLREGMVKETHGYLIK 483
+++ ++++ + L L M + ++ DS T+++++ C++ + K H +I+
Sbjct: 417 AIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIR 476
Query: 484 TGLL---LGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGS 540
+ + L DT A++D Y+KC ++ A F S + +++V++ +I+GY G
Sbjct: 477 SFIRPCSLVDT------ALVDMYSKCGYLEAAQRCFDS-ISWKDVVSWGILIAGYGFHGK 529
Query: 541 ADEAFMTFSRIYARDLTPWNLM----IRVYAENDFPNQALSLFLKL-QAQGMKPD 590
D A +S + P +++ + + N Q L +F + + G++P+
Sbjct: 530 GDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPN 584
Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 169/414 (40%), Gaps = 74/414 (17%)
Query: 423 WNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLI 482
+NS ++ S G + Q L+ + ML + PD+ T +++ C ++ R H ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 483 KTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSAD 542
G ++ I +++++ YAK + +A VF+ + E R++V + +I Y+ G
Sbjct: 74 VNGF---SSDFYISSSLVNLYAKFGLLAHARKVFEEMRE-RDVVHWTAMIGCYSRAGIVG 129
Query: 543 EA----------------------------------FMTFSRIYAR--DLTPWNLMIRVY 566
EA F+ IY D+ N M+ +Y
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 567 AENDFPNQA-------------------------------LSLFLKLQAQGMKPDAVTIM 595
+ D A L L +++ G++PD T
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 596 SLLPVCSQMASVHLLRQCHGYVIRACFD-GVRLNGALLHLYAKCGSIFSASKIFQCHPQK 654
+ L V M + + R H +++ FD + L AL+ +Y KCG ++ ++ + P K
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Query: 655 DVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIF 714
DVV T MI G G + AL VFS+ML+ G + I +V+++C+ G D G +
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369
Query: 715 RSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGA 768
+ + TP SL+ + A+ G + + + RM E D W ++
Sbjct: 370 GYVLRHGYTLDTP-ALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG 421
Score = 40.8 bits (94), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 13/131 (9%)
Query: 637 KCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITA 696
+ S+ +++K F H I + HG K L FS ML + PD +
Sbjct: 3 RTSSVLNSTKYFNSH-----------INHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPS 51
Query: 697 VLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVE 756
+L AC+ + GL I + + V G +SLV+L A+ G ++ A + M E
Sbjct: 52 LLKACASLQRLSFGLSIHQQV-LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMR-E 109
Query: 757 ADCNVWGTLLG 767
D W ++G
Sbjct: 110 RDVVHWTAMIG 120
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 337 bits (864), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 207/698 (29%), Positives = 360/698 (51%), Gaps = 82/698 (11%)
Query: 242 PIKPNYATILNILP--ICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRF 299
P+ + +T+L + + S+++ G F + +HC V++ L+ V + N L++ Y +
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSG-LMFSVYLMNNLMNVYSKT 62
Query: 300 GRTEEAELLFRRMK-------------------------------SRDLVSWNAIIAGYA 328
G A LF M RD VSW +I GY
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 329 SNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEED 388
+ ++ KA+ + +++ KE I P TL ++L + A + ++ GK++H + ++ L +
Sbjct: 123 NIGQYHKAIRVMGDMV-KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG-LRGN 180
Query: 389 AAVGNALVSFYAKCSD-------------------------------MEAAYRTFLMICR 417
+V N+L++ YAKC D M+ A F +
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 418 RDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGI-RPDSITILTIIHFCTTVLREGMVKE 476
RD+++WNSM+ F++ GY+ + L++ + ML + + PD T+ +++ C + + + K+
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 477 THGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKR-----NLVTFNPV 531
H +++ TG D + NA++ Y++C ++ A + L+E+R + F +
Sbjct: 301 IHSHIVTTGF---DISGIVLNALISMYSRCGGVETA----RRLIEQRGTKDLKIEGFTAL 353
Query: 532 ISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDA 591
+ GY G ++A F + RD+ W MI Y ++ +A++LF + G +P++
Sbjct: 354 LDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNS 413
Query: 592 VTIMSLLPVCSQMASVHLLRQCHGYVIRAC-FDGVRLNGALLHLYAKCGSIFSASKIFQ- 649
T+ ++L V S +AS+ +Q HG +++ V ++ AL+ +YAK G+I SAS+ F
Sbjct: 414 YTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDL 473
Query: 650 CHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDE 709
++D V T+MI A HG + AL++F ML G+ PDH+ V SAC+HAGLV++
Sbjct: 474 IRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQ 533
Query: 710 GLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGAC 769
G + F ++ V I PT YA +VDL R G + +A + +MP+E D WG+LL AC
Sbjct: 534 GRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSAC 593
Query: 770 RIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAA 829
R+H ++LG+V A RL +E +N G Y ++NLY+A +W+ +IRK MK +KK
Sbjct: 594 RVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQG 653
Query: 830 CSWIEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIK 867
SWIEV+ K + F D +HP ++ IY + + ++IK
Sbjct: 654 FSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 224/467 (47%), Gaps = 81/467 (17%)
Query: 83 ALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA--CSHVDDARVMNLFYNMHVRD 140
+L+ Y+K G +D + F Q+ D V+W ++ G+ + RVM V++
Sbjct: 85 TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM----VKE 140
Query: 141 QPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDA 200
+P T+ VL++ A + GK +H++++K GL + V NSL +MYAK G A
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 201 YSVFDSIEDKDVVSWNA-------------------------------VISGLSENKVLG 229
VFD + +D+ SWNA +ISG ++
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 230 DAFRLFSWMLTEP-IKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSV 288
A +FS ML + + P+ T+ ++L CA+L++ G++IH +++ I+ + V
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEK---LCIGKQIHSHIVTTGFDISGI-V 316
Query: 289 CNALVSFYLRFGRTE---------------------------------EAELLFRRMKSR 315
NAL+S Y R G E +A+ +F +K R
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 316 DLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEI 375
D+V+W A+I GY + + +A+NLF ++ P+S TL ++L + L +L GK+I
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-RPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 376 HGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMI-CRRDLISWNSMLDAFSESG 434
HG ++ + +V NAL++ YAK ++ +A R F +I C RD +SW SM+ A ++ G
Sbjct: 436 HGSAVKSGEIYS-VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHG 494
Query: 435 YNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYL 481
+ + L L MLMEG+RPD IT + + CT G+V + Y
Sbjct: 495 HAEEALELFETMLMEGLRPDHITYVGVFSACT---HAGLVNQGRQYF 538
Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 141/612 (23%), Positives = 269/612 (43%), Gaps = 116/612 (18%)
Query: 185 NSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIK 244
N++ S Y+KRG + FD + +D VSW +I G A R+ M+ E I+
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 245 PNYATILNILPICASLDEDVGYFFGREIHCYVLRRA------------------------ 280
P T+ N+L AS+ G+++H ++++
Sbjct: 144 PTQFTLTNVL---ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 281 ------ELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWL 334
++ D+S NA+++ +++ G+ + A F +M RD+V+WN++I+G+ L
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 335 KALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNA 394
+AL++F +++ ++ PD TL S+L ACA L+ L +GK+IH + + + + V NA
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGF-DISGIVLNA 319
Query: 395 LVSFYAKCSDMEAAYR---------------------------------TFLMICRRDLI 421
L+S Y++C +E A R F+ + RD++
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVV 379
Query: 422 SWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYL 481
+W +M+ + + G + +NL M+ G RP+S T+ ++ +++ K+ HG
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA 439
Query: 482 IKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSA 541
+K+G + + + NA++ YAK NI A F + +R+ V++ +I A G A
Sbjct: 440 VKSGEIYSVS---VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 542 DEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVC 601
+E AL LF + +G++PD +T + + C
Sbjct: 497 EE-------------------------------ALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 602 SQMASVHLLRQCHGYV--IRACFDGVRLNGALLHLYAKCGSIFSASKIFQCHP-QKDVVM 658
+ V+ RQ + + + ++ L+ + G + A + + P + DVV
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 659 LTAMIGGYAMH---GMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFR 715
+++ +H +GK A + +LE + + + + SAC G +E +I +
Sbjct: 586 WGSLLSACRVHKNIDLGKVAAERLL-LLEPENSGAYSALANLYSAC---GKWEEAAKIRK 641
Query: 716 S-----IEKVQG 722
S ++K QG
Sbjct: 642 SMKDGRVKKEQG 653
Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 219/502 (43%), Gaps = 88/502 (17%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
+ + ++ SW T+I G+ G + +A+ + ++ + + VL S + +
Sbjct: 106 LPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG--IEPTQFTLTNVLASVAATRCME 163
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCG---------------------------- 92
GK +H ++ KLG +VS +LLN+YAKCG
Sbjct: 164 TGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHM 223
Query: 93 ---VIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTV 149
+D F Q+ D VTWN ++SGF D R +++F M P+ T+
Sbjct: 224 QVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD-LRALDIFSKMLRDSLLSPDRFTL 282
Query: 150 AIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYA----------------- 192
A VLSACA L + GK +H++++ G + +V N+L SMY+
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGT 342
Query: 193 ----------------KRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFS 236
K G ++ A ++F S++D+DVV+W A+I G ++ G+A LF
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 237 WMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFY 296
M+ +PN T + + + G++IH ++ E I VSV NAL++ Y
Sbjct: 403 SMVGGGQRPNSYT---LAAMLSVASSLASLSHGKQIHGSAVKSGE-IYSVSVSNALITMY 458
Query: 297 LRFGRTEEAELLFRRMK-SRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVT 355
+ G A F ++ RD VSW ++I A + +AL LF E + E + PD +T
Sbjct: 459 AKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF-ETMLMEGLRPDHIT 517
Query: 356 LVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDM--------EA 407
V + AC + + G++ YF + +D +S YA D+ EA
Sbjct: 518 YVGVFSACTHAGLVNQGRQ---YF----DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEA 570
Query: 408 AYRTFLMICRRDLISWNSMLDA 429
M D+++W S+L A
Sbjct: 571 QEFIEKMPIEPDVVTWGSLLSA 592
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 192/447 (42%), Gaps = 83/447 (18%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
MAE + +W ++I+GF + G AL +F+ L+ S + + ++VL +C +L +
Sbjct: 238 MAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL-LSPDRFTLASVLSACANLEKLC 296
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQ----------------- 103
+GK +H ++ G V AL+++Y++CG ++ +L Q
Sbjct: 297 IGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDG 356
Query: 104 ----------------VDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSV 147
+ + D V W ++ G+ H +NLF +M V +PNS
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYE-QHGSYGEAINLFRSM-VGGGQRPNSY 414
Query: 148 TVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSI 207
T+A +LS + L + GK +H +K G V N+L +MYAK G + A FD I
Sbjct: 415 TLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLI 474
Query: 208 E-DKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPIC--ASLDEDV 264
++D VSW ++I L+++ +A LF ML E ++P++ T + + C A L
Sbjct: 475 RCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQ- 533
Query: 265 GYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAII 324
GR+ + ++I +S +V + R G +EA+
Sbjct: 534 ----GRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ------------------ 571
Query: 325 AGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGK-EIHGYFLRHP 383
E I K I PD VT SLL AC KN+ +GK L P
Sbjct: 572 -----------------EFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEP 614
Query: 384 YLEEDAAVGNALVSFYAKCSDMEAAYR 410
E++ +AL + Y+ C E A +
Sbjct: 615 ---ENSGAYSALANLYSACGKWEEAAK 638
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 337 bits (864), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 200/691 (28%), Positives = 365/691 (52%), Gaps = 52/691 (7%)
Query: 183 VGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWML-TE 241
+GN+ +M+ + G + DA+ VF + ++++ SWN ++ G ++ +A L+ ML
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 242 PIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGR 301
+KP+ T +L C + + G+E+H +V+R + D+ V NAL++ Y++ G
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPD---LARGKEVHVHVVRYGYEL-DIDVVNALITMYVKCGD 246
Query: 302 TEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLP 361
+ A LLF RM RD++SWNA+I+GY N + L LF + + PD +TL S++
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS-VDPDLMTLTSVIS 305
Query: 362 ACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLI 421
AC L + ++G++IH Y + + D +V N+L Y A + F + R+D++
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGF-AVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Query: 422 SWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYL 481
SW +M+ + + + ++ M + ++PD IT+ ++ C T+ E H
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 482 IKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSA 541
IK L+ + + N +++ Y+KC+ I A ++F + + ++N++++ +I+G
Sbjct: 425 IKARLI---SYVIVANNLINMYSKCKCIDKALDIFHN-IPRKNVISWTSIIAGLRLNNRC 480
Query: 542 DEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVC 601
EA +FL+ ++P+A+T+ + L C
Sbjct: 481 FEAL--------------------------------IFLRQMKMTLQPNAITLTAALAAC 508
Query: 602 SQMASVHLLRQCHGYVIRACFDGVRLN----GALLHLYAKCGSIFSASKIFQCHPQKDVV 657
+++ ++ ++ H +V+R GV L+ ALL +Y +CG + +A F +KDV
Sbjct: 509 ARIGALMCGKEIHAHVLRT---GVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVT 564
Query: 658 MLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSI 717
++ GY+ G G +++F M++ V PD + ++L CS + +V +GL F +
Sbjct: 565 SWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM 624
Query: 718 EKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVEL 777
E G+ P + YA +VDLL R G++ +A+ + +MPV D VWG LL ACRIHH+++L
Sbjct: 625 EDY-GVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDL 683
Query: 778 GRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVER 837
G + A +FE++ ++G Y+++ NLYA +W V ++R++MK L A CSW+EV+
Sbjct: 684 GELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKG 743
Query: 838 KNNAFMAGDYSHPRRDMIYWVLSILDEQIKD 868
K +AF++ D HP+ I VL E++ +
Sbjct: 744 KVHAFLSDDKYHPQTKEINTVLEGFYEKMSE 774
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 196/707 (27%), Positives = 342/707 (48%), Gaps = 30/707 (4%)
Query: 13 INGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHGYVTKL 72
++G C +G +EA+ L + +V + +F A+++ C G + Y L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAV--DEDVFVALVRLCEWKRAQEEGSKV--YSIAL 121
Query: 73 GHISCQAVS--KALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACS-HVDDARV 129
+S V A L ++ + G + D + +FG++ + +WN+L+ G+A + D+A
Sbjct: 122 SSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEA-- 179
Query: 130 MNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTS 189
M L++ M KP+ T VL C + + GK +H +V+++G E V N+L +
Sbjct: 180 MCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALIT 239
Query: 190 MYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYAT 249
MY K G V A +FD + +D++SWNA+ISG EN + + LF M + P+ T
Sbjct: 240 MYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMT 299
Query: 250 ILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLF 309
+ +++ C L + GR+IH YV+ D+SVCN+L YL G EAE LF
Sbjct: 300 LTSVISACELLGDRR---LGRDIHAYVITTG-FAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 310 RRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNL 369
RM+ +D+VSW +I+GY N KA++ + ++ ++ + PD +T+ ++L ACA L +L
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKAIDTY-RMMDQDSVKPDEITVAAVLSACATLGDL 414
Query: 370 KVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDA 429
G E+H ++ L V N L++ Y+KC ++ A F I R+++ISW S++
Sbjct: 415 DTGVELHKLAIK-ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG 473
Query: 430 FSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLG 489
+ + L L M M ++P++IT+ + C + KE H ++++TG+ L
Sbjct: 474 LRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 490 DTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFS 549
D + NA+LD Y +C + A++ F S +K+++ ++N +++GY+ G F
Sbjct: 533 DF---LPNALLDMYVRCGRMNTAWSQFNS--QKKDVTSWNILLTGYSERGQGSMVVELFD 587
Query: 550 RIYARDLTPWNL----MIRVYAENDFPNQALSLFLKLQAQGMKPDA---VTIMSLLPVCS 602
R+ + P + ++ +++ Q L F K++ G+ P+ ++ LL
Sbjct: 588 RMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAG 647
Query: 603 QMASVHLLRQCHGYVIRACFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAM 662
++ H Q G LN +H G + SA IF+ +K V +
Sbjct: 648 ELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGEL-SAQHIFEL-DKKSVGYYILL 705
Query: 663 IGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDE 709
YA G + KV M E G+ D + HA L D+
Sbjct: 706 CNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDD 752
Score = 217 bits (553), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 252/480 (52%), Gaps = 21/480 (4%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M+E N SW ++ G+ + G EA+ L+ H + V+ + F VL++C + D+
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLY-HRMLWVGGVKPDVYTFPCVLRTCGGIPDLA 213
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGF- 119
GK +H +V + G+ V AL+ +Y KCG + LF ++ D ++WN ++SG+
Sbjct: 214 RGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 120 --ACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGL 177
H + LF+ M P+ +T+ V+SAC LG G+ +HAYVI G
Sbjct: 274 ENGMCH----EGLELFFAMRGL-SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGF 328
Query: 178 ERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSW 237
V NSLT MY G +A +F +E KD+VSW +ISG N + A +
Sbjct: 329 AVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRM 388
Query: 238 MLTEPIKPNYATILNILPICASL-DEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFY 296
M + +KP+ T+ +L CA+L D D G E+H + +A LI+ V V N L++ Y
Sbjct: 389 MDQDSVKPDEITVAAVLSACATLGDLDTGV----ELHKLAI-KARLISYVIVANNLINMY 443
Query: 297 LRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTL 356
+ ++A +F + ++++SW +IIAG N+ +AL ++ K + P+++TL
Sbjct: 444 SKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM--KMTLQPNAITL 501
Query: 357 VSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMIC 416
+ L ACA + L GKEIH + LR + D + NAL+ Y +C M A+ F
Sbjct: 502 TAALAACARIGALMCGKEIHAHVLRTG-VGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQ 559
Query: 417 RRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFC--TTVLREGMV 474
++D+ SWN +L +SE G S + L + M+ +RPD IT ++++ C + ++R+G++
Sbjct: 560 KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLM 619
Score = 179 bits (454), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 242/482 (50%), Gaps = 41/482 (8%)
Query: 286 VSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELIT 345
V + NA ++ ++RFG +A +F +M R+L SWN ++ GYA + +A+ L+ ++
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 346 KEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDM 405
+ PD T +L C + +L GKE+H + +R+ Y E D V NAL++ Y KC D+
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGY-ELDIDVVNALITMYVKCGDV 247
Query: 406 EAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFC 465
++A F + RRD+ISWN+M+ + E+G + L L M + PD +T+ ++I C
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 466 TTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNL 525
+ + ++ H Y+I TG + + ++ N++ Y + + A +F S +E++++
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAV---DISVCNSLTQMYLNAGSWREAEKLF-SRMERKDI 363
Query: 526 VTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQ 585
V++ +ISGY N P++A+ + +
Sbjct: 364 VSWTTMISGYEY-------------------------------NFLPDKAIDTYRMMDQD 392
Query: 586 GMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRA-CFDGVRLNGALLHLYAKCGSIFSA 644
+KPD +T+ ++L C+ + + + H I+A V + L+++Y+KC I A
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452
Query: 645 SKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHA 704
IF P+K+V+ T++I G ++ AL +F +++ + P+ + +TA L+AC+
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARI 511
Query: 705 GLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGT 764
G + G EI + + G+ +L+D+ R G+++ A+S N + D W
Sbjct: 512 GALMCGKEIHAHVLRT-GVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNI 568
Query: 765 LL 766
LL
Sbjct: 569 LL 570
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 336 bits (862), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 230/759 (30%), Positives = 382/759 (50%), Gaps = 53/759 (6%)
Query: 80 VSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVR 139
V+ L++ YA G + ++F V D WN ++ S+ D AR + F++M +
Sbjct: 61 VASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHF-SNGDYARSLCFFFSMLLS 119
Query: 140 DQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFG-LERHTLVGNSLTSMYAKRGLVH 198
Q P+ T +V+SACA L G +H V+K G +R+T VG S Y+K G +
Sbjct: 120 GQ-SPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQ 178
Query: 199 DAYSVFDSIEDKDVVSWNAVISGLSENKV----LGDAFRLFSWMLTEPIKPNYATILNIL 254
DA VFD + D+DVV+W A+ISG +N LG ++ S ++ KPN T+
Sbjct: 179 DACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHS-AGSDVDKPNPRTLECGF 237
Query: 255 PICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKS 314
C++L GR +H + ++ L + V +++ SFY + G EA L FR +
Sbjct: 238 QACSNLG---ALKEGRCLHGFAVKNG-LASSKFVQSSMFSFYSKSGNPSEAYLSFRELGD 293
Query: 315 RDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKE 374
D+ SW +IIA A + + ++ ++F E+ K M PD V + L+ + + GK
Sbjct: 294 EDMFSWTSIIASLARSGDMEESFDMFWEMQNKGM-HPDGVVISCLINELGKMMLVPQGKA 352
Query: 375 IHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRR-DLISWNSMLDAFSES 433
HG+ +RH + D+ V N+L+S Y K + A + F I + +WN+ML + +
Sbjct: 353 FHGFVIRHCF-SLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKM 411
Query: 434 GYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEH 493
+ + + L + GI DS + ++I C+ + + K H Y++KT L D
Sbjct: 412 KCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSL---DLTI 468
Query: 494 NIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYA 553
++ N+++D Y K ++ A+ +F C AD +T
Sbjct: 469 SVVNSLIDLYGKMGDLTVAWRMF---------------------C-EADTNVIT------ 500
Query: 554 RDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQC 613
WN MI Y + +A++LF ++ ++ KP ++T+++LL C S+ +
Sbjct: 501 -----WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMI 555
Query: 614 HGYVIRACFD-GVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMG 672
H Y+ + + L+ AL+ +YAKCG + + ++F QKD V MI GY MHG
Sbjct: 556 HRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDV 615
Query: 673 KAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYAS 732
++A+ +F M E V P A+LSAC+HAGLV++G ++F + + +KP + Y+
Sbjct: 616 ESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYD-VKPNLKHYSC 674
Query: 733 LVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADN 792
LVDLL+R G + +A S V MP D +WGTLL +C H E E+G +A R + N
Sbjct: 675 LVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQN 734
Query: 793 IGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACS 831
G Y++++N+Y+A +W+ R++M+ + K A S
Sbjct: 735 DGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 220 bits (561), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 191/712 (26%), Positives = 329/712 (46%), Gaps = 71/712 (9%)
Query: 9 WITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSA--VLKSCTSLADILLGKALH 66
W +II +G + +L F L S S H F+A V+ +C L +G +H
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDH----FTAPMVVSACAELLWFHVGTFVH 148
Query: 67 GYVTKLGHIS-CQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVD 125
G V K G AV + + Y+KCG + D +F ++ + D V W ++SG HV
Sbjct: 149 GLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISG----HVQ 204
Query: 126 DARV---MNLFYNMHV--RDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERH 180
+ + MH D KPN T+ AC+ LG + G+ LH + +K GL
Sbjct: 205 NGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASS 264
Query: 181 TLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT 240
V +S+ S Y+K G +AY F + D+D+ SW ++I+ L+ + + ++F +F M
Sbjct: 265 KFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQN 324
Query: 241 EPIKPNYATILNILPICASLDEDVGYFF----GREIHCYVLRRAELIADVSVCNALVSFY 296
+ + P+ I + L ++G G+ H +V+R D +VCN+L+S Y
Sbjct: 325 KGMHPDGVVI-------SCLINELGKMMLVPQGKAFHGFVIRHC-FSLDSTVCNSLLSMY 376
Query: 297 LRFGRTEEAELLFRRMKSR-DLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVT 355
+F AE LF R+ + +WN ++ GY +K + LF I I DS +
Sbjct: 377 CKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELF-RKIQNLGIEIDSAS 435
Query: 356 LVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMI 415
S++ +C+++ + +GK +H Y ++ L+ +V N+L+ Y K D+ A+R F
Sbjct: 436 ATSVISSCSHIGAVLLGKSLHCYVVK-TSLDLTISVVNSLIDLYGKMGDLTVAWRMF--- 491
Query: 416 CRRD--LISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFC--TTVLRE 471
C D +I+WN+M+ ++ + + + L + M+ E +P SIT++T++ C T L
Sbjct: 492 CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLER 551
Query: 472 GMVKETHGYLIKTGLLLGDTEH----NIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVT 527
G + H Y+ +TEH ++ A++D YAKC +++ + +F + +++ V
Sbjct: 552 GQM--IHRYIT-------ETEHEMNLSLSAALIDMYAKCGHLEKSRELFDA-GNQKDAVC 601
Query: 528 FNPVISGYANCGSADEAFMTFSRIYARDLTPWN----LMIRVYAENDFPNQALSLFLKLQ 583
+N +ISGY G + A F ++ D+ P ++ Q LFLK+
Sbjct: 602 WNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMH 661
Query: 584 AQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFD------GVRLNGALLHLYAK 637
+KP+ L+ + S+ + L + V+ F G L+ + H +
Sbjct: 662 QYDVKPNLKHYSCLVDLLSRSGN---LEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFE 718
Query: 638 CGSIFSASKIFQCHPQKD--VVMLTAMIGGYAMHGMGKAALKVFSDMLELGV 687
G I A + PQ D +ML M Y+ G + A + M E GV
Sbjct: 719 MG-IRMAERAVASDPQNDGYYIMLANM---YSAAGKWEEAERAREMMRESGV 766
Score = 203 bits (517), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 155/629 (24%), Positives = 287/629 (45%), Gaps = 44/629 (6%)
Query: 169 HAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVL 228
+A +I GL + V + L S YA G + + VF + +D+ WN++I N
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 229 GDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSV 288
+ F ML P++ T ++ CA L + + G +H VL+ + +V
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAEL---LWFHVGTFVHGLVLKHGGFDRNTAV 163
Query: 289 CNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELIT--K 346
+ V FY + G ++A L+F M RD+V+W AII+G+ N E L C++ +
Sbjct: 164 GASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGS 223
Query: 347 EMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDME 406
++ P+ TL AC+ L LK G+ +HG+ +++ L V +++ SFY+K +
Sbjct: 224 DVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNG-LASSKFVQSSMFSFYSKSGNPS 282
Query: 407 AAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCT 466
AY +F + D+ SW S++ + + SG + ++ M +G+ PD + I +I+
Sbjct: 283 EAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELG 342
Query: 467 TVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLV 526
++ K HG++I+ L T + N++L Y K + A +F + E+ N
Sbjct: 343 KMMLVPQGKAFHGFVIRHCFSLDST---VCNSLLSMYCKFELLSVAEKLFCRISEEGN-- 397
Query: 527 TFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQG 586
EA WN M++ Y + + + LF K+Q G
Sbjct: 398 ---------------KEA--------------WNTMLKGYGKMKCHVKCIELFRKIQNLG 428
Query: 587 MKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFD-GVRLNGALLHLYAKCGSIFSAS 645
++ D+ + S++ CS + +V L + H YV++ D + + +L+ LY K G + A
Sbjct: 429 IEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAW 488
Query: 646 KIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAG 705
++F C +V+ AMI Y + A+ +F M+ P + + +L AC + G
Sbjct: 489 RMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTG 547
Query: 706 LVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTL 765
++ G I R I + + + A+L+D+ A+ G + + L + + D W +
Sbjct: 548 SLERGQMIHRYITETEH-EMNLSLSAALIDMYAKCGHLEKSRELFD-AGNQKDAVCWNVM 605
Query: 766 LGACRIHHEVELGRVVANRLFEMEADNIG 794
+ +H +VE + +++ E + G
Sbjct: 606 ISGYGMHGDVESAIALFDQMEESDVKPTG 634
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/559 (24%), Positives = 265/559 (47%), Gaps = 18/559 (3%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSV-RHNHQLFSAVLKSCTSLADI 59
M + + +W II+G ++G + L + V + N + ++C++L +
Sbjct: 187 MPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGAL 246
Query: 60 LLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGF 119
G+ LHG+ K G S + V ++ + Y+K G + Y F ++ + D +W +++
Sbjct: 247 KEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASL 306
Query: 120 ACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLER 179
A S D ++F+ M + P+ V ++ +++ ++ + GK+ H +VI+
Sbjct: 307 ARSG-DMEESFDMFWEMQNKGM-HPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSL 364
Query: 180 HTLVGNSLTSMYAKRGLVHDAYSVFDSI-EDKDVVSWNAVISGLSENKVLGDAFRLFSWM 238
+ V NSL SMY K L+ A +F I E+ + +WN ++ G + K LF +
Sbjct: 365 DSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI 424
Query: 239 LTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLR 298
I+ + A+ +++ C+ + G+ +HCYV++ + L +SV N+L+ Y +
Sbjct: 425 QNLGIEIDSASATSVISSCSHIG---AVLLGKSLHCYVVKTS-LDLTISVVNSLIDLYGK 480
Query: 299 FGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVS 358
G A +F + ++++WNA+IA Y ++ KA+ LF +++ E P S+TLV+
Sbjct: 481 MGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRMVS-ENFKPSSITLVT 538
Query: 359 LLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRR 418
LL AC +L+ G+ IH Y + E + ++ AL+ YAKC +E + F ++
Sbjct: 539 LLMACVNTGSLERGQMIHRYITETEH-EMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK 597
Query: 419 DLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETH 478
D + WN M+ + G + L + M ++P T L ++ CT G+V++
Sbjct: 598 DAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACT---HAGLVEQGK 654
Query: 479 GYLIKTGLLLGDTEHNIG--NAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYA 536
+K + D + N+ + ++D ++ N++ A + S+ + V + ++S
Sbjct: 655 KLFLK--MHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCM 712
Query: 537 NCGSADEAFMTFSRIYARD 555
G + R A D
Sbjct: 713 THGEFEMGIRMAERAVASD 731
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 336 bits (861), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 208/631 (32%), Positives = 327/631 (51%), Gaps = 55/631 (8%)
Query: 276 VLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLK 335
V +R + VS N ++S YLR G E A LF M RDLVSWN +I GY N K
Sbjct: 86 VFKRMPRWSSVSY-NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGK 144
Query: 336 ALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNAL 395
A LF E++ + D + ++L Y +N V + F R P E++ NAL
Sbjct: 145 ARELF-EIMPER----DVCSWNTMLSG--YAQNGCV-DDARSVFDRMP--EKNDVSWNAL 194
Query: 396 VSFYAKCSDMEAA-------------------------------YRTFLMICRRDLISWN 424
+S Y + S ME A + F + RD++SWN
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWN 254
Query: 425 SMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKT 484
+++ +++SG + L + ++ + T + ++ MV+E K
Sbjct: 255 TIITGYAQSGKIDEARQLFDESPVQ-------DVFTWTAMVSGYIQNRMVEEARELFDK- 306
Query: 485 GLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEA 544
+ + NA+L Y + ++ A +F ++ RN+ T+N +I+GYA CG EA
Sbjct: 307 ---MPERNEVSWNAMLAGYVQGERMEMAKELF-DVMPCRNVSTWNTMITGYAQCGKISEA 362
Query: 545 FMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQM 604
F ++ RD W MI Y+++ +AL LF++++ +G + + + S L C+ +
Sbjct: 363 KNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADV 422
Query: 605 ASVHLLRQCHGYVIRACFD-GVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMI 663
++ L +Q HG +++ ++ G + ALL +Y KCGSI A+ +F+ KD+V MI
Sbjct: 423 VALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI 482
Query: 664 GGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGI 723
GY+ HG G+ AL+ F M G+ PD + AVLSACSH GLVD+G + F ++ + G+
Sbjct: 483 AGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV 542
Query: 724 KPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVAN 783
P + YA +VDLL R G + DA++L+ MP E D +WGTLLGA R+H EL A+
Sbjct: 543 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAAD 602
Query: 784 RLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFM 843
++F ME +N G YV++SNLYA+ RW V ++R M+ + +KK SWIE++ K + F
Sbjct: 603 KIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFS 662
Query: 844 AGDYSHPRRDMIYWVLSILDEQIKDQVTISE 874
GD HP +D I+ L LD ++K +S+
Sbjct: 663 VGDEFHPEKDEIFAFLEELDLRMKKAGYVSK 693
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/514 (26%), Positives = 235/514 (45%), Gaps = 74/514 (14%)
Query: 2 AEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILL 61
+ + K W I+ + R G EAL +F + S SV +N + S L++ + L
Sbjct: 60 GDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWS-SVSYNG-MISGYLRN----GEFEL 113
Query: 62 GKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFAC 121
+ L + + +S + K Y + + +LF + D +WN +LSG+A
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKG----YVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQ 169
Query: 122 SH-VDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACAR---------------------- 158
+ VDDAR ++F M P+ N V+ +LSA +
Sbjct: 170 NGCVDDAR--SVFDRM-----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222
Query: 159 ---LGGIFAGKSLHAYVIKFGLE--RHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVV 213
LGG K + F R + N++ + YA+ G + +A +FD +DV
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 214 SWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIH 273
+W A++SG +N+++ +A LF M E + ++ +L GY G +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKM-PERNEVSWNAML------------AGYVQGERME 329
Query: 274 CYVLRRAELIADVSVC------NALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGY 327
A+ + DV C N +++ Y + G+ EA+ LF +M RD VSW A+IAGY
Sbjct: 330 M-----AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY 384
Query: 328 ASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEE 387
+ + +AL LF ++ +E + + S L CA + L++GK++HG ++ Y E
Sbjct: 385 SQSGHSFEALRLFVQM-EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY-ET 442
Query: 388 DAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCML 447
VGNAL+ Y KC +E A F + +D++SWN+M+ +S G+ L M
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK 502
Query: 448 MEGIRPDSITILTIIHFCTTVLREGMVKETHGYL 481
EG++PD T++ ++ C+ G+V + Y
Sbjct: 503 REGLKPDDATMVAVLSACSHT---GLVDKGRQYF 533
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 137/290 (47%), Gaps = 36/290 (12%)
Query: 8 SWITIINGFCRDGLHKEALSLFAHELQSSP------------------SVRHNHQLFSAV 49
SW TII G+ + G EA LF SP V +LF +
Sbjct: 252 SWNTIITGYAQSGKIDEARQLF----DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 50 LKSCTSLADILLGKALHGYVTKLGH-----ISCQAVS--KALLNLYAKCGVIDDCYKLFG 102
+ + +L + G ++ + C+ VS ++ YA+CG I + LF
Sbjct: 308 PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFD 367
Query: 103 QVDNTDPVTWNILLSGFACS-HVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGG 161
++ DPV+W +++G++ S H +A + LF M R+ + N + + LS CA +
Sbjct: 368 KMPKRDPVSWAAMIAGYSQSGHSFEA--LRLFVQME-REGGRLNRSSFSSALSTCADVVA 424
Query: 162 IFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISG 221
+ GK LH ++K G E VGN+L MY K G + +A +F + KD+VSWN +I+G
Sbjct: 425 LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAG 484
Query: 222 LSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICAS---LDEDVGYFF 268
S + A R F M E +KP+ AT++ +L C+ +D+ YF+
Sbjct: 485 YSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFY 534
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 335 bits (859), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 194/609 (31%), Positives = 326/609 (53%), Gaps = 47/609 (7%)
Query: 269 GREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYA 328
G ++HCY+L+ + ++ N L+ Y + A +F M R++VSW+A+++G+
Sbjct: 25 GGQVHCYLLKSGSGL-NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHV 83
Query: 329 SNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEED 388
N + +L+LF E+ ++ I+P+ T + L AC L L+ G +IHG+ L+ + E
Sbjct: 84 LNGDLKGSLSLFSEM-GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGF-EMM 141
Query: 389 AAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLM 448
VGN+LV Y+KC + A + F I R LISWN+M+ F +GY S+ L+ M
Sbjct: 142 VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQE 201
Query: 449 EGI--RPDSITILTIIHFCTTVLREGMV---KETHGYLIKTGLLLGDTEHNIGNAILDAY 503
I RPD T+ +++ C++ GM+ K+ HG+L+++G + I +++D Y
Sbjct: 202 ANIKERPDEFTLTSLLKACSST---GMIYAGKQIHGFLVRSGFHC-PSSATITGSLVDLY 257
Query: 504 AKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMI 563
KC Y F+ A F +I + + W+ +I
Sbjct: 258 VKC---GYLFS-----------------------------ARKAFDQIKEKTMISWSSLI 285
Query: 564 RVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIR--AC 621
YA+ +A+ LF +LQ + D+ + S++ V + A + +Q ++ +
Sbjct: 286 LGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSG 345
Query: 622 FDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSD 681
+ LN +++ +Y KCG + A K F KDV+ T +I GY HG+GK ++++F +
Sbjct: 346 LETSVLN-SVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYE 404
Query: 682 MLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGG 741
ML + PD V AVLSACSH+G++ EG E+F + + GIKP E YA +VDLL R G
Sbjct: 405 MLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAG 464
Query: 742 QISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSN 801
++ +A L++ MP++ + +W TLL CR+H ++ELG+ V L ++A N NYV+MSN
Sbjct: 465 RLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSN 524
Query: 802 LYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSI 861
LY W+ R+L + LKK A SW+E+ER+ + F +G+ SHP +I L
Sbjct: 525 LYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKE 584
Query: 862 LDEQIKDQV 870
+ ++++++
Sbjct: 585 AERRLREEL 593
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/566 (26%), Positives = 269/566 (47%), Gaps = 28/566 (4%)
Query: 37 PSVRHNHQLFSAVLKSCTSLADILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDD 96
P+ R N ++L+ CT G +H Y+ K G S L+++Y KC
Sbjct: 3 PNQRQN---LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLM 59
Query: 97 CYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSAC 156
YK+F + + V+W+ L+SG + D ++LF M R PN T + L AC
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNG-DLKGSLSLFSEMG-RQGIYPNEFTFSTNLKAC 117
Query: 157 ARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWN 216
L + G +H + +K G E VGNSL MY+K G +++A VF I D+ ++SWN
Sbjct: 118 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN 177
Query: 217 AVISGLSENKVLGDAFRLFSWMLTEPIK--PNYATILNILPICASLDEDVGYFF-GREIH 273
A+I+G A F M IK P+ T+ ++L C+S G + G++IH
Sbjct: 178 AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSS----TGMIYAGKQIH 233
Query: 274 CYVLRRA-ELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDE 332
+++R + ++ +LV Y++ G A F ++K + ++SW+++I GYA E
Sbjct: 234 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE 293
Query: 333 WLKALNLFCELITKEM-IWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAV 391
+++A+ LF L +E+ DS L S++ A L+ GK++ ++ P E + +
Sbjct: 294 FVEAMGLFKRL--QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL 351
Query: 392 GNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGI 451
N++V Y KC ++ A + F + +D+ISW ++ + + G + + + ML I
Sbjct: 352 -NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI 410
Query: 452 RPDSITILTIIHFCTTVLREGMVKETH---GYLIKTGLLLGDTEHNIGNAILDAYAKCRN 508
PD + L ++ C+ GM+KE L++T + EH ++D +
Sbjct: 411 EPDEVCYLAVLSACS---HSGMIKEGEELFSKLLETHGIKPRVEHYA--CVVDLLGRAGR 465
Query: 509 IKYAFNVFQSLLEKRNLVTFNPVIS---GYANCGSADEAFMTFSRIYARDLTPWNLMIRV 565
+K A ++ ++ K N+ + ++S + + E RI A++ + +M +
Sbjct: 466 LKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNL 525
Query: 566 YAENDFPNQALSLFLKLQAQGMKPDA 591
Y + + N+ + +G+K +A
Sbjct: 526 YGQAGYWNEQGNARELGNIKGLKKEA 551
Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 207/401 (51%), Gaps = 21/401 (5%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E N SW +++G +G K +LSLF+ + N FS LK+C L +
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSE--MGRQGIYPNEFTFSTNLKACGLLNALE 124
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
G +HG+ K+G V +L+++Y+KCG I++ K+F ++ + ++WN +++GF
Sbjct: 125 KGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFV 184
Query: 121 CSHVDDARVMNLFYNMHVRD-QPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLE- 178
+ ++ ++ F M + + +P+ T+ +L AC+ G I+AGK +H ++++ G
Sbjct: 185 HAGY-GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC 243
Query: 179 -RHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSW 237
+ SL +Y K G + A FD I++K ++SW+++I G ++ +A LF
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 238 M--LTEPIKP-NYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVS 294
+ L I ++I+ + A L + G+++ ++ + + SV N++V
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQ------GKQMQALAVKLPSGL-ETSVLNSVVD 356
Query: 295 FYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSV 354
YL+ G +EAE F M+ +D++SW +I GY + K++ +F E++ + I PD V
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML-RHNIEPDEV 415
Query: 355 TLVSLLPACAYLKNLKVGKEIHGYFLR----HPYLEEDAAV 391
+++L AC++ +K G+E+ L P +E A V
Sbjct: 416 CYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV 456
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 152/324 (46%), Gaps = 14/324 (4%)
Query: 8 SWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHG 67
SW +I GF G +AL F +++ R + +++LK+C+S I GK +HG
Sbjct: 175 SWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 68 YVTKLGH--ISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVD 125
++ + G S ++ +L++LY KCG + K F Q+ ++W+ L+ G+A +
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYA-QEGE 293
Query: 126 DARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGN 185
M LF + + + +S ++ ++ A + GK + A +K T V N
Sbjct: 294 FVEAMGLFKRLQELN-SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLN 352
Query: 186 SLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKP 245
S+ MY K GLV +A F ++ KDV+SW VI+G ++ + + R+F ML I+P
Sbjct: 353 SVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEP 412
Query: 246 NYATILNILPICAS---LDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRT 302
+ L +L C+ + E G E+ +L + V +V R GR
Sbjct: 413 DEVCYLAVLSACSHSGMIKE------GEELFSKLLETHGIKPRVEHYACVVDLLGRAGRL 466
Query: 303 EEAELLFRRMKSRDLVS-WNAIIA 325
+EA+ L M + V W +++
Sbjct: 467 KEAKHLIDTMPIKPNVGIWQTLLS 490
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 89/163 (54%), Gaps = 4/163 (2%)
Query: 593 TIMSLLPVCSQMASVHLLRQCHGYVIRACFDGVRL--NGALLHLYAKCGSIFSASKIFQC 650
++S+L VC++ Q H Y++++ G+ L + L+ +Y KC A K+F
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSG-SGLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 651 HPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEG 710
P+++VV +A++ G+ ++G K +L +FS+M G+ P+ + L AC +++G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 711 LEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRM 753
L+I K+ G + E SLVD+ ++ G+I++A + R+
Sbjct: 127 LQIHGFCLKI-GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
>sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protein At2g37310
OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1
Length = 657
Score = 334 bits (856), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/598 (31%), Positives = 323/598 (54%), Gaps = 15/598 (2%)
Query: 285 DVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELI 344
D + + L+SFY R R +A +F + R+ S+NA++ Y S + + A +LF I
Sbjct: 56 DNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWI 115
Query: 345 -----TKEMIWPDSVTLVSLLPACAYLKNLKVG---KEIHGYFLRHPYLEEDAAVGNALV 396
+ + PDS+++ +L A + + +G +++HG+ +R + + D VGN ++
Sbjct: 116 GSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGF-DSDVFVGNGMI 174
Query: 397 SFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLM-EGIRPDS 455
++Y KC ++E+A + F + RD++SWNSM+ +S+SG + ML +P+
Sbjct: 175 TYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNG 234
Query: 456 ITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNV 515
+T++++ C E H +I+ + + + ++ NA++ YAKC ++ YA +
Sbjct: 235 VTVISVFQACGQSSDLIFGLEVHKKMIENHIQM---DLSLCNAVIGFYAKCGSLDYARAL 291
Query: 516 FQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQA 575
F + EK + VT+ +ISGY G EA FS + + L+ WN MI +N+ +
Sbjct: 292 FDEMSEKDS-VTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEV 350
Query: 576 LSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDG-VRLNGALLHL 634
++ F ++ G +P+ VT+ SLLP + +++ ++ H + IR D + + +++
Sbjct: 351 INSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDN 410
Query: 635 YAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVI 694
YAK G + A ++F + ++ TA+I YA+HG +A +F M LG PD V +
Sbjct: 411 YAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTL 470
Query: 695 TAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMP 754
TAVLSA +H+G D IF S+ I+P E YA +V +L+R G++SDA +++MP
Sbjct: 471 TAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMP 530
Query: 755 VEADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVE 814
++ VWG LL + ++E+ R +RLFEME +N GNY +M+NLY RW+
Sbjct: 531 IDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEM 590
Query: 815 IRKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIKDQVTI 872
+R MK LKK SWIE E+ +F+A D S R +Y ++ L E + D+ I
Sbjct: 591 VRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYI 648
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 210/421 (49%), Gaps = 43/421 (10%)
Query: 80 VSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVD-DARVMNLFY---N 135
++ L++ Y + +F ++ + ++N LL + + DA + L + +
Sbjct: 59 LASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSS 118
Query: 136 MHVRDQPKPNSVTVAIVLSACARLGGIFAG---KSLHAYVIKFGLERHTLVGNSLTSMYA 192
+ D +P+S++++ VL A + + G + +H +VI+ G + VGN + + Y
Sbjct: 119 CYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYT 178
Query: 193 KRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLT-EPIKPNYATIL 251
K + A VFD + ++DVVSWN++ISG S++ D +++ ML KPN T++
Sbjct: 179 KCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVI 238
Query: 252 NILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRR 311
++ C + + FG E+H ++ + D+S+CNA++ FY + G + A LF
Sbjct: 239 SVFQACGQSSDLI---FGLEVHKKMIEN-HIQMDLSLCNAVIGFYAKCGSLDYARALFDE 294
Query: 312 MKSRDLVSWNAIIAGYASNDEWLKALNLFCELIT-------------------------- 345
M +D V++ AII+GY ++ +A+ LF E+ +
Sbjct: 295 MSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSF 354
Query: 346 KEMI----WPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAK 401
+EMI P++VTL SLLP+ Y NLK GKEIH + +R+ + + V +++ YAK
Sbjct: 355 REMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNG-ADNNIYVTTSIIDNYAK 413
Query: 402 CSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTI 461
+ A R F R LI+W +++ A++ G + +L + M G +PD +T+ +
Sbjct: 414 LGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAV 473
Query: 462 I 462
+
Sbjct: 474 L 474
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 215/468 (45%), Gaps = 74/468 (15%)
Query: 168 LHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKV 227
LHA ++ F ++ + + L S Y ++ A VFD I ++ S+NA++ + ++
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREM 103
Query: 228 LGDAFRLF-SWM-----LTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAE 281
DAF LF SW+ ++ +P+ +I +L + D+ R++H +V+R
Sbjct: 104 YFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG- 162
Query: 282 LIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFC 341
+DV V N ++++Y + E A +F M RD+VSWN++I+GY+ + + ++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 342 ELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAK 401
++ P+ VT++S+ AC +L G E+H + + +++ D ++ NA++ FYAK
Sbjct: 223 AMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIEN-HIQMDLSLCNAVIGFYAK 281
Query: 402 CSDMEAAYRTFLMICRRD-------------------------------LISWNSMLDAF 430
C ++ A F + +D L +WN+M+
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGL 341
Query: 431 SESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGD 490
++ ++ + +N M+ G RP+++T+ +++ T KE H + I+ G D
Sbjct: 342 MQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNG---AD 398
Query: 491 TEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSR 550
+ +I+D YAK + A VF + + R+L+ + +I+ YA G +D
Sbjct: 399 NNIYVTTSIIDNYAKLGFLLGAQRVFDN-CKDRSLIAWTAIITAYAVHGDSD-------- 449
Query: 551 IYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLL 598
A SLF ++Q G KPD VT+ ++L
Sbjct: 450 -----------------------SACSLFDQMQCLGTKPDDVTLTAVL 474
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 189/413 (45%), Gaps = 52/413 (12%)
Query: 5 NAKSWITIINGFCRDGLHKEALSLF----AHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
NA S+ ++ + ++ +A SLF SS + R + S VLK+ + D
Sbjct: 87 NAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFW 146
Query: 61 LG---KALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLS 117
LG + +HG+V + G S V ++ Y KC I+ K+F ++ D V+WN ++S
Sbjct: 147 LGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMIS 206
Query: 118 GFACS-HVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFG 176
G++ S +D + M + M KPN VTV V AC + + G +H +I+
Sbjct: 207 GYSQSGSFEDCKKM--YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH 264
Query: 177 LERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVV----------------------- 213
++ + N++ YAK G + A ++FD + +KD V
Sbjct: 265 IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFS 324
Query: 214 --------SWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVG 265
+WNA+ISGL +N + F M+ +PN T+ ++LP SL
Sbjct: 325 EMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLP---SLTYSSN 381
Query: 266 YFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIA 325
G+EIH + +R ++ V +++ Y + G A+ +F K R L++W AII
Sbjct: 382 LKGGKEIHAFAIRNGA-DNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIIT 440
Query: 326 GYASNDEWLKALNLFCE---LITKEMIWPDSVTLVSLLPACAYLKNLKVGKEI 375
YA + + A +LF + L TK PD VTL ++L A A+ + + + I
Sbjct: 441 AYAVHGDSDSACSLFDQMQCLGTK----PDDVTLTAVLSAFAHSGDSDMAQHI 489
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 163/359 (45%), Gaps = 40/359 (11%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M+E + SW ++I+G+ + G ++ ++ L S + N +V ++C +D++
Sbjct: 193 MSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACS-DFKPNGVTVISVFQACGQSSDLI 251
Query: 61 LGKALHGYVTKLGHISCQ-AVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGF 119
G +H + + HI ++ A++ YAKCG +D LF ++ D VT+ ++SG+
Sbjct: 252 FGLEVHKKMIE-NHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGY 310
Query: 120 -ACSHVDDA-----------------------------RVMNLFYNMHVRDQPKPNSVTV 149
A V +A V+N F M +R +PN+VT+
Sbjct: 311 MAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREM-IRCGSRPNTVTL 369
Query: 150 AIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIED 209
+ +L + + GK +HA+ I+ G + + V S+ YAK G + A VFD+ +D
Sbjct: 370 SSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKD 429
Query: 210 KDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICA-SLDEDVGYFF 268
+ +++W A+I+ + + A LF M KP+ T+ +L A S D D+
Sbjct: 430 RSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDM---- 485
Query: 269 GREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVS-WNAIIAG 326
+ I +L + ++ V +VS R G+ +A +M + W A++ G
Sbjct: 486 AQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNG 544
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 332 bits (851), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 212/664 (31%), Positives = 332/664 (50%), Gaps = 49/664 (7%)
Query: 212 VVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGRE 271
V +WN I ++ LF M +PN T + CA L DVG
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL-ADVGC--CEM 73
Query: 272 IHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASND 331
+H ++++ + +DV V A V +++ + A +F RM RD +WNA+++G+ +
Sbjct: 74 VHAHLIK-SPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG 132
Query: 332 EWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAV 391
KA +LF E+ E I PDSVT+++L+ + ++ K+LK+ + +H +R ++ V
Sbjct: 133 HTDKAFSLFREMRLNE-ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG-VDVQVTV 190
Query: 392 GNALVSFYAKCSDMEAAYRTFLMICR--RDLISWNSMLDAFSESGYNSQFLNLLNCMLME 449
N +S Y KC D+++A F I R R ++SWNSM A+S G L ML E
Sbjct: 191 ANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE 250
Query: 450 GIRPDSITILTIIHFCTT--VLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCR 507
+PD T + + C L +G + +H + T
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGT----------------------- 287
Query: 508 NIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYA 567
+++ N IS Y+ A + F + +R W +MI YA
Sbjct: 288 --------------DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYA 333
Query: 568 ENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYV-IRAC-FDGV 625
E ++AL+LF + G KPD VT++SL+ C + S+ + I C D V
Sbjct: 334 EKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNV 393
Query: 626 RLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLEL 685
+ AL+ +Y+KCGSI A IF P+K VV T MI GYA++G+ ALK+FS M++L
Sbjct: 394 MICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL 453
Query: 686 GVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISD 745
P+H+ AVL AC+H+G +++G E F +++V I P + Y+ +VDLL R G++ +
Sbjct: 454 DYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEE 513
Query: 746 AYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVVMSNLYAA 805
A L+ M + D +WG LL AC+IH V++ A LF +E YV M+N+YAA
Sbjct: 514 ALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAA 573
Query: 806 DARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDYSHPRRDMIYWVLSILDEQ 865
WDG IR +MK R++KK S I+V KN++F G++ H ++IY+ L+ L
Sbjct: 574 AGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLF 633
Query: 866 IKDQ 869
KD+
Sbjct: 634 AKDK 637
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 215/427 (50%), Gaps = 11/427 (2%)
Query: 42 NHQLFSAVLKSCTSLADILLGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLF 101
N+ F V K+C LAD+ + +H ++ K S V A ++++ KC +D K+F
Sbjct: 51 NNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVF 110
Query: 102 GQVDNTDPVTWNILLSGFACS-HVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLG 160
++ D TWN +LSGF S H D A +LF M + ++ P+SVTV ++ + +
Sbjct: 111 ERMPERDATTWNAMLSGFCQSGHTDKA--FSLFREMRL-NEITPDSVTVMTLIQSASFEK 167
Query: 161 GIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIE--DKDVVSWNAV 218
+ +++HA I+ G++ V N+ S Y K G + A VF++I+ D+ VVSWN++
Sbjct: 168 SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSM 227
Query: 219 ISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLR 278
S DAF L+ ML E KP+ +T +N+ C + + GR IH + +
Sbjct: 228 FKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQ---GRLIHSHAIH 284
Query: 279 RAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALN 338
D+ N +S Y + T A LLF M SR VSW +I+GYA + +AL
Sbjct: 285 LGT-DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALA 343
Query: 339 LFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSF 398
LF +I K PD VTL+SL+ C +L+ GK I + ++ + NAL+
Sbjct: 344 LFHAMI-KSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDM 402
Query: 399 YAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITI 458
Y+KC + A F + +++W +M+ ++ +G + L L + M+ +P+ IT
Sbjct: 403 YSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITF 462
Query: 459 LTIIHFC 465
L ++ C
Sbjct: 463 LAVLQAC 469
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 165/632 (26%), Positives = 290/632 (45%), Gaps = 67/632 (10%)
Query: 112 WNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAY 171
WN+ + A + D + LF M R +PN+ T V ACARL + + +HA+
Sbjct: 20 WNLQIRE-AVNRNDPVESLLLFREMK-RGGFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 172 VIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDA 231
+IK VG + M+ K V A VF+ + ++D +WNA++SG ++ A
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 232 FRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNA 291
F LF M I P+ T++ ++ AS ++ + +H +R + V+V N
Sbjct: 138 FSLFREMRLNEITPDSVTVMTLIQ-SASFEKSLKLL--EAMHAVGIRLG-VDVQVTVANT 193
Query: 292 LVSFYLRFGRTEEAELLFRRMK--SRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMI 349
+S Y + G + A+L+F + R +VSWN++ Y+ E A L+C L+ +E
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC-LMLREEF 252
Query: 350 WPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAY 409
PD T ++L +C + L G+ IH + + H ++D N +S Y+K D +A
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAI-HLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 410 RTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVL 469
F ++ R +SW M+ ++E G + L L + M+ G +PD +T+L++I C
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCG--- 368
Query: 470 REGMVKETHGYLIKTGLLLGDTEHN--IGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVT 527
+ G + ET ++ + G N I NA++D Y+KC +I A ++F + EK +VT
Sbjct: 369 KFGSL-ETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK-TVVT 426
Query: 528 FNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGM 587
+ +I+GYA G ++ E AL LF K+
Sbjct: 427 WTTMIAGYALNG-------------------------IFLE------ALKLFSKMIDLDY 455
Query: 588 KPDAVTIMSLLPVCSQMASV-------HLLRQCHGYVIRACFDGVRLNGALLHLYAKCGS 640
KP+ +T +++L C+ S+ H+++Q + G+ ++ L + G
Sbjct: 456 KPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS-----PGLDHYSCMVDLLGRKGK 510
Query: 641 IFSASKIFQCHPQK-DVVMLTAMIGGYAMHGMGKAALKVFSDM--LELGVNPDHVVITAV 697
+ A ++ + K D + A++ +H K A + + LE + +V + +
Sbjct: 511 LEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANI 570
Query: 698 LSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQ 729
+A AG+ D G RSI K + IK P +
Sbjct: 571 YAA---AGMWD-GFARIRSIMKQRNIKKYPGE 598
Score = 152 bits (385), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 191/380 (50%), Gaps = 18/380 (4%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E +A +W +++GFC+ G +A SLF E++ + + + +++S + +
Sbjct: 113 MPERDATTWNAMLSGFCQSGHTDKAFSLF-REMRLN-EITPDSVTVMTLIQSASFEKSLK 170
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDP--VTWNILLSG 118
L +A+H +LG V+ ++ Y KCG +D +F +D D V+WN +
Sbjct: 171 LLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKA 230
Query: 119 FACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLE 178
+ S +A Y + +R++ KP+ T + ++C + G+ +H++ I G +
Sbjct: 231 Y--SVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTD 288
Query: 179 RHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWM 238
+ N+ SMY+K A +FD + + VSW +ISG +E + +A LF M
Sbjct: 289 QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM 348
Query: 239 LTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIA----DVSVCNALVS 294
+ KP+ T+L+++ C G F E ++ RA++ +V +CNAL+
Sbjct: 349 IKSGEKPDLVTLLSLISGC-------GKFGSLETGKWIDARADIYGCKRDNVMICNALID 401
Query: 295 FYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSV 354
Y + G EA +F + +V+W +IAGYA N +L+AL LF ++I + P+ +
Sbjct: 402 MYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYK-PNHI 460
Query: 355 TLVSLLPACAYLKNLKVGKE 374
T +++L ACA+ +L+ G E
Sbjct: 461 TFLAVLQACAHSGSLEKGWE 480
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 159/323 (49%), Gaps = 17/323 (5%)
Query: 8 SWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHG 67
SW ++ + G +A L+ L+ + + F + SC + + G+ +H
Sbjct: 223 SWNSMFKAYSVFGEAFDAFGLYCLMLREE--FKPDLSTFINLAASCQNPETLTQGRLIHS 280
Query: 68 YVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDA 127
+ LG +++Y+K LF + + V+W +++SG+A D
Sbjct: 281 HAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYA-EKGDMD 339
Query: 128 RVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLER-HTLVGNS 186
+ LF+ M ++ KP+ VT+ ++S C + G + GK + A +G +R + ++ N+
Sbjct: 340 EALALFHAM-IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNA 398
Query: 187 LTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPN 246
L MY+K G +H+A +FD+ +K VV+W +I+G + N + +A +LFS M+ KPN
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPN 458
Query: 247 YATILNILPICA---SLDEDVGYFFGREIHCYVLRRAELIA-DVSVCNALVSFYLRFGRT 302
+ T L +L CA SL++ YF +++++ I+ + + +V R G+
Sbjct: 459 HITFLAVLQACAHSGSLEKGWEYF-------HIMKQVYNISPGLDHYSCMVDLLGRKGKL 511
Query: 303 EEAELLFRRMKSR-DLVSWNAII 324
EEA L R M ++ D W A++
Sbjct: 512 EEALELIRNMSAKPDAGIWGALL 534
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 236/837 (28%), Positives = 415/837 (49%), Gaps = 65/837 (7%)
Query: 3 EPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLG 62
+P W ++I G+ R GLH+EAL F + + + + F+ LK+C D G
Sbjct: 61 DPGVVLWNSMIRGYTRAGLHREALGFFGY-MSEEKGIDPDKYSFTFALKACAGSMDFKKG 119
Query: 63 KALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACS 122
+H + ++G S + AL+ +Y K + ++F ++ D VTWN ++SG A +
Sbjct: 120 LRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQN 179
Query: 123 HVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTL 182
A ++ LF++M + V++ ++ A ++L + LH VIK G
Sbjct: 180 GCSSAALL-LFHDMR-SCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FA 235
Query: 183 VGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEP 242
+ L MY ++ A SVF+ + KD SW +++ + N + LF M
Sbjct: 236 FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYD 295
Query: 243 IKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRT 302
++ N + L A + + V G IH Y +++ LI DVSV +L+S Y + G
Sbjct: 296 VRMNKVAAASALQAAAYVGDLVK---GIAIHDYAVQQG-LIGDVSVATSLMSMYSKCGEL 351
Query: 303 EEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPA 362
E AE LF ++ RD+VSW+A+IA Y + +A++LF +++ + I P++VTL S+L
Sbjct: 352 EIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM-RIHIKPNAVTLTSVLQG 410
Query: 363 CAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLIS 422
CA + ++GK IH Y ++ +E + A++S YAKC A + F + +D ++
Sbjct: 411 CAGVAASRLGKSIHCYAIKAD-IESELETATAVISMYAKCGRFSPALKAFERLPIKDAVA 469
Query: 423 WNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIH---FCTTVLREGMVKETHG 479
+N++ +++ G ++ ++ M + G+ PDS T++ ++ FC+ R V +G
Sbjct: 470 FNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCV---YG 526
Query: 480 YLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCG 539
+IK G D+E ++ +A+++ + KC + A +F +++ V++N +++GY G
Sbjct: 527 QIIKHGF---DSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHG 583
Query: 540 SADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLP 599
A+EA TF +++ + +P+AVT ++++
Sbjct: 584 QAEEAVATFR-------------------------------QMKVEKFQPNAVTFVNIVR 612
Query: 600 VCSQMASVHLLRQCHGYVIRACF-DGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVM 658
++++++ + H +I+ F + +L+ +YAKCG I S+ K F K +V
Sbjct: 613 AAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVS 672
Query: 659 LTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIE 718
M+ YA HG+ A+ +F M E + PD V +VLSAC HAGLV+EG IF +
Sbjct: 673 WNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMG 732
Query: 719 KVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELG 778
+ I+ E YA +VDLL + G +A ++ RM V+ VWG LL + R+H + L
Sbjct: 733 ERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLS 792
Query: 779 RVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEV 835
+L ++E N + Y+ D R V + + +KK ACSWIEV
Sbjct: 793 NAALCQLVKLEPLNPSH-------YSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 179/696 (25%), Positives = 320/696 (45%), Gaps = 58/696 (8%)
Query: 84 LLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPK 143
L+N Y+ D +F V + V WN ++ G+ + + + F M
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHR-EALGFFGYMSEEKGID 97
Query: 144 PNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSV 203
P+ + L ACA G +H + + GLE +G +L MY K + A V
Sbjct: 98 PDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQV 157
Query: 204 FDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDE- 262
FD + KDVV+WN ++SGL++N A LF M + + ++ ++ N++P + L++
Sbjct: 158 FDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKS 217
Query: 263 DVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNA 322
DV R +H V+++ + A S L+ Y AE +F + +D SW
Sbjct: 218 DV----CRCLHGLVIKKGFIFAFSS---GLIDMYCNCADLYAAESVFEEVWRKDESSWGT 270
Query: 323 IIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRH 382
++A YA N + + L LF +L+ + + V S L A AY+ +L G IH Y ++
Sbjct: 271 MMAAYAHNGFFEEVLELF-DLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQ 329
Query: 383 PYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNL 442
L D +V +L+S Y+KC ++E A + F+ I RD++SW++M+ ++ ++G + + ++L
Sbjct: 330 G-LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISL 388
Query: 443 LNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDA 502
M+ I+P+++T+ +++ C V + K H Y IK + ++E A++
Sbjct: 389 FRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADI---ESELETATAVISM 445
Query: 503 YAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLM 562
YAKC A F+ L K + V FN + GY G A++AF
Sbjct: 446 YAKCGRFSPALKAFERLPIK-DAVAFNALAQGYTQIGDANKAF----------------- 487
Query: 563 IRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACF 622
++ ++ G+ PD+ T++ +L C+ + +G +I+ F
Sbjct: 488 --------------DVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGF 533
Query: 623 DG-VRLNGALLHLYAKCGSIFSASKIF-QCHPQKDVVMLTAMIGGYAMHGMGKAALKVFS 680
D + AL++++ KC ++ +A +F +C +K V M+ GY +HG + A+ F
Sbjct: 534 DSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFR 593
Query: 681 DMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARG 740
M P+ V ++ A + + G+ + S+ + TP SLVD+ A+
Sbjct: 594 QMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVG-NSLVDMYAKC 652
Query: 741 GQISDA----YSLVNRMPVEADCNVWGTLLGACRIH 772
G I + + N+ V W T+L A H
Sbjct: 653 GMIESSEKCFIEISNKYIVS-----WNTMLSAYAAH 683
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 211/468 (45%), Gaps = 40/468 (8%)
Query: 290 NALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMI 349
N L++ Y F R + + ++F ++ +V WN++I GY +AL F + ++ I
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 350 WPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAY 409
PD + L ACA + K G IH + LE D +G ALV Y K D+ +A
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHD-LIAEMGLESDVYIGTALVEMYCKARDLVSAR 155
Query: 410 RTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVL 469
+ F + +D+++WN+M+ +++G +S L L + M + D +++ +I + +
Sbjct: 156 QVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLE 215
Query: 470 REGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFN 529
+ + + HG +IK G + + ++D Y C ++ A +VF+
Sbjct: 216 KSDVCRCLHGLVIKKGFIFA-----FSSGLIDMYCNCADLYAAESVFE------------ 258
Query: 530 PVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKP 589
++ +D + W M+ YA N F + L LF ++ ++
Sbjct: 259 --------------------EVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM 298
Query: 590 DAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDG-VRLNGALLHLYAKCGSIFSASKIF 648
+ V S L + + + H Y ++ G V + +L+ +Y+KCG + A ++F
Sbjct: 299 NKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLF 358
Query: 649 QCHPQKDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVD 708
+DVV +AMI Y G A+ +F DM+ + + P+ V +T+VL C+
Sbjct: 359 INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASR 418
Query: 709 EGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVE 756
G I K I+ E +++ + A+ G+ S A R+P++
Sbjct: 419 LGKSIHCYAIKAD-IESELETATAVISMYAKCGRFSPALKAFERLPIK 465
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 328 bits (842), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 203/611 (33%), Positives = 322/611 (52%), Gaps = 52/611 (8%)
Query: 290 NALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMI 349
N ++ R G+ EA LF S+ + SWN+++AGY +N A LF E+ + +I
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 350 -WPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAA 408
W V+ Y+KN ++ E F P E + ALV Y ++ A
Sbjct: 81 SWNGLVS--------GYMKNGEI-DEARKVFDLMP--ERNVVSWTALVKGYVHNGKVDVA 129
Query: 409 YRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGI-RPDSITILTIIHFCTT 467
F + ++ +SW ML F + G C L E I D+I ++IH
Sbjct: 130 ESLFWKMPEKNKVSWTVMLIGFLQDGRIDD-----ACKLYEMIPDKDNIARTSMIH---G 181
Query: 468 VLREGMVKETH---------GYLIKTGLLLGDTEHNIGN------------------AIL 500
+ +EG V E + T ++ G ++N + ++L
Sbjct: 182 LCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSML 241
Query: 501 DAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWN 560
Y + I+ A +F+ ++ + ++ N +ISG G +A F + R+ W
Sbjct: 242 MGYVQNGRIEDAEELFE-VMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQ 300
Query: 561 LMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRA 620
+I+++ N F +AL LF+ +Q QG++P T++S+L VC+ +AS+H +Q H ++R
Sbjct: 301 TVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC 360
Query: 621 CFD-GVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYAMHGMGKAALKVF 679
FD V + L+ +Y KCG + + IF P KD++M ++I GYA HG+G+ ALKVF
Sbjct: 361 QFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVF 420
Query: 680 SDM-LELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYASLVDLLA 738
+M L P+ V A LSACS+AG+V+EGL+I+ S+E V G+KP YA +VD+L
Sbjct: 421 CEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLG 480
Query: 739 RGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEMEADNIGNYVV 798
R G+ ++A +++ M VE D VWG+LLGACR H ++++ A +L E+E +N G Y++
Sbjct: 481 RAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYIL 540
Query: 799 MSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDY-SHPRRDMIYW 857
+SN+YA+ RW V E+RKLMKTR ++K CSW EVE K +AF G SHP ++ I
Sbjct: 541 LSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILK 600
Query: 858 VLSILDEQIKD 868
+L LD +++
Sbjct: 601 ILDELDGLLRE 611
Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 193/397 (48%), Gaps = 32/397 (8%)
Query: 83 ALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACS-HVDDARVMNLFYNMHVRDQ 141
L++ Y K G ID+ K+F + + V+W L+ G+ + VD A +LF+ M
Sbjct: 84 GLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAE--SLFWKM----- 136
Query: 142 PKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAY 201
P+ N V+ ++L + G I L+ + ++ + S+ K G V +A
Sbjct: 137 PEKNKVSWTVMLIGFLQDGRIDDACKLYEMI----PDKDNIARTSMIHGLCKEGRVDEAR 192
Query: 202 SVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLD 261
+FD + ++ V++W +++G +N + DA ++F ++ E + ++ ++L
Sbjct: 193 EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFD-VMPEKTEVSWTSML---------- 241
Query: 262 EDVGYFF-GREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSW 320
+GY GR L + V CNA++S + G +A +F MK R+ SW
Sbjct: 242 --MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASW 299
Query: 321 NAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFL 380
+I + N L+AL+LF L+ K+ + P TL+S+L CA L +L GK++H +
Sbjct: 300 QTVIKIHERNGFELEALDLFI-LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Query: 381 RHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFL 440
R + + D V + L++ Y KC ++ + F +D+I WNS++ ++ G + L
Sbjct: 359 RCQF-DVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 441 NLLNCMLMEG-IRPDSITILTIIHFCTTVLREGMVKE 476
+ M + G +P+ +T + + C+ GMV+E
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSACSYA---GMVEE 451
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 186/377 (49%), Gaps = 26/377 (6%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E N SW ++ G+ +G A SLF + N ++ +L I
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK------NKVSWTVMLIGFLQDGRID 158
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
L+ + +I+ ++++ K G +D+ ++F ++ +TW +++G+
Sbjct: 159 DACKLYEMIPDKDNIA----RTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYG 214
Query: 121 CSH-VDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLER 179
++ VDDAR +F M P+ V+ +L + G I + L + +
Sbjct: 215 QNNRVDDAR--KIFDVM-----PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV----K 263
Query: 180 HTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWML 239
+ N++ S ++G + A VFDS+++++ SW VI N +A LF M
Sbjct: 264 PVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQ 323
Query: 240 TEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRF 299
+ ++P + T+++IL +CASL G+++H ++R + DV V + L++ Y++
Sbjct: 324 KQGVRPTFPTLISILSVCASL---ASLHHGKQVHAQLVR-CQFDVDVYVASVLMTMYIKC 379
Query: 300 GRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSL 359
G +++L+F R S+D++ WN+II+GYAS+ +AL +FCE+ P+ VT V+
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 360 LPACAYLKNLKVGKEIH 376
L AC+Y ++ G +I+
Sbjct: 440 LSACSYAGMVEEGLKIY 456
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/465 (22%), Positives = 200/465 (43%), Gaps = 77/465 (16%)
Query: 89 AKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACSHVDDARVMNLFYNMHVRDQPKPNSVT 148
++ G I + KLF D+ +WN +++G+ F N+ RD K
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGY-------------FANLMPRDARK----- 69
Query: 149 VAIVLSACARLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIE 208
+ +R+ + N L S Y K G + +A VFD +
Sbjct: 70 -----------------------LFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMP 106
Query: 209 DKDVVSWNAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFF 268
+++VVSW A++ G N + A LF W + E K ++ +L +D+ +
Sbjct: 107 ERNVVSWTALVKGYVHNGKVDVAESLF-WKMPEKNKVSWTVMLIGFLQDGRIDDACKLY- 164
Query: 269 GREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYA 328
++ + IA S+ + L + GR +EA +F M R +++W ++ GY
Sbjct: 165 ------EMIPDKDNIARTSMIHGLC----KEGRVDEAREIFDEMSERSVITWTTMVTGYG 214
Query: 329 SNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKV--GKEIHGYFLRHPYLE 386
N+ A +F + K V+ S+L Y++N ++ +E+ P +
Sbjct: 215 QNNRVDDARKIFDVMPEK-----TEVSWTSML--MGYVQNGRIEDAEELFEVMPVKPVI- 266
Query: 387 EDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCM 446
NA++S + ++ A R F + R+ SW +++ +G+ + L+L M
Sbjct: 267 ----ACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILM 322
Query: 447 LMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKC 506
+G+RP T+++I+ C ++ K+ H L++ D + + + ++ Y KC
Sbjct: 323 QKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQF---DVDVYVASVLMTMYIKC 379
Query: 507 RNI---KYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTF 548
+ K F+ F S ++++ +N +ISGYA+ G +EA F
Sbjct: 380 GELVKSKLIFDRFPS----KDIIMWNSIISGYASHGLGEEALKVF 420
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 5/221 (2%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E N SW T+I R+G EAL LF L VR ++L C SLA +
Sbjct: 291 MKERNDASWQTVIKIHERNGFELEALDLFI--LMQKQGVRPTFPTLISILSVCASLASLH 348
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
GK +H + + V+ L+ +Y KCG + +F + + D + WN ++SG+A
Sbjct: 349 HGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYA 408
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIK-FGLER 179
SH + +F M + KPN VT LSAC+ G + G ++ + FG++
Sbjct: 409 -SHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467
Query: 180 HTLVGNSLTSMYAKRGLVHDAYSVFDSIE-DKDVVSWNAVI 219
T + M + G ++A + DS+ + D W +++
Sbjct: 468 ITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 327 bits (838), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 322/620 (51%), Gaps = 51/620 (8%)
Query: 290 NALVSFYLRFGRTEEAELLFRRMK--SRDLVSWNAIIAGYASNDEWLKALNLFCELITKE 347
+VS Y G A +F + RD V +NA+I G++ N++ A+NLFC++ E
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKM-KHE 142
Query: 348 MIWPDSVTLVSLLPACAYL-KNLKVGKEIHGYFLRHP--YLEEDAAVGNALVSFYAKCSD 404
PD+ T S+L A + + K + H L+ Y+ +V NALVS Y+KC+
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYI---TSVSNALVSVYSKCAS 199
Query: 405 ----MEAAYRTFLMICRRDLISWNSMLDAFSESGY------------------------- 435
+ +A + F I +D SW +M+ + ++GY
Sbjct: 200 SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMIS 259
Query: 436 ---NSQF----LNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYLIKTGLLL 488
N F L ++ M+ GI D T ++I C T + K+ H Y+++
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE--- 316
Query: 489 GDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTF 548
D + N+++ Y KC A +F+ + K +LV++N ++SGY + G EA + F
Sbjct: 317 -DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 549 SRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVH 608
+ +++ W +MI AEN F + L LF ++ +G +P + C+ + +
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434
Query: 609 LLRQCHGYVIRACFDGVRLNG-ALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGYA 667
+Q H +++ FD G AL+ +YAKCG + A ++F+ P D V A+I
Sbjct: 435 NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALG 494
Query: 668 MHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTP 727
HG G A+ V+ +ML+ G+ PD + + VL+ACSHAGLVD+G + F S+E V I P
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGA 554
Query: 728 EQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFE 787
+ YA L+DLL R G+ SDA S++ +P + +W LL CR+H +ELG + A++LF
Sbjct: 555 DHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFG 614
Query: 788 MEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEVERKNNAFMAGDY 847
+ ++ G Y+++SN++AA +W+ V +RKLM+ R +KK ACSWIE+E + + F+ D
Sbjct: 615 LIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDT 674
Query: 848 SHPRRDMIYWVLSILDEQIK 867
SHP + +Y L L ++++
Sbjct: 675 SHPEAEAVYIYLQDLGKEMR 694
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 155/612 (25%), Positives = 263/612 (42%), Gaps = 127/612 (20%)
Query: 33 LQSSPS-VRHNHQLFSAVLKSCTSL--ADILLGKALHGYVTKLGHISCQAVSKALLNLYA 89
+Q +P VR ++A L+ C L + L +A+HG + G + L+++Y
Sbjct: 1 MQPNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYC 60
Query: 90 KCGVIDDCYKLFGQVDNTDPVTWNILLSGFAC---------------------------- 121
K ++ +LF ++ D + ++SG+
Sbjct: 61 KSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMI 120
Query: 122 ---SHVDDA-RVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAG-KSLHAYVIKFG 176
SH +D +NLF M + KP++ T A VL+ A + HA +K G
Sbjct: 121 TGFSHNNDGYSAINLFCKMK-HEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSG 179
Query: 177 LERHTLVGNSLTSMYAK----RGLVHDAYSVFDSIEDKDVVSW----------------- 215
T V N+L S+Y+K L+H A VFD I +KD SW
Sbjct: 180 AGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGE 239
Query: 216 ---------------NAVISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICASL 260
NA+ISG +A + M++ I+ + T +++ CA+
Sbjct: 240 ELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT- 298
Query: 261 DEDVGYF-FGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVS 319
G G+++H YVLRR + N+LVS Y + G+ +EA +F +M ++DLVS
Sbjct: 299 ---AGLLQLGKQVHAYVLRREDF--SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVS 353
Query: 320 WNAIIAGYASNDEWLKALNLFCELITKEMI-W---------------------------- 350
WNA+++GY S+ +A +F E+ K ++ W
Sbjct: 354 WNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF 413
Query: 351 -PDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAY 409
P + +CA L G++ H L+ + + + GNAL++ YAKC +E A
Sbjct: 414 EPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGF-DSSLSAGNALITMYAKCGVVEEAR 472
Query: 410 RTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVL 469
+ F + D +SWN+++ A + G+ ++ +++ ML +GIRPD IT+LT++ C+
Sbjct: 473 QVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS--- 529
Query: 470 REGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAK-----CRNIKY--AFNVFQSLLEK 522
G+V + Y +T + I D YA+ CR+ K+ A +V +SL K
Sbjct: 530 HAGLVDQGRKYFDSM-----ETVYRIPPGA-DHYARLIDLLCRSGKFSDAESVIESLPFK 583
Query: 523 RNLVTFNPVISG 534
+ ++SG
Sbjct: 584 PTAEIWEALLSG 595
Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 167/353 (47%), Gaps = 44/353 (12%)
Query: 8 SWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADILLGKALHG 67
++ +I+G+ G ++EAL + + S + + + +V+++C + + LGK +H
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSG--IELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 68 YVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACS-HVDD 126
YV + S +L++LY KCG D+ +F ++ D V+WN LLSG+ S H+ +
Sbjct: 311 YVLRREDFSFH-FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 127 ARV-----------------------------MNLFYNMHVRDQPKPNSVTVAIVLSACA 157
A++ + LF M R+ +P + + +CA
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK-REGFEPCDYAFSGAIKSCA 428
Query: 158 RLGGIFAGKSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNA 217
LG G+ HA ++K G + GN+L +MYAK G+V +A VF ++ D VSWNA
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNA 488
Query: 218 VISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICAS---LDEDVGYFFGREIHC 274
+I+ L ++ +A ++ ML + I+P+ T+L +L C+ +D+ YF E
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVY 548
Query: 275 YVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLVS-WNAIIAG 326
+ A+ A L+ R G+ +AE + + + W A+++G
Sbjct: 549 RIPPGADHYA------RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 202/476 (42%), Gaps = 113/476 (23%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSP--------------SVRHNHQLF 46
++EP+ + T+++G+C G A +F + +P HN+ +
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVF----EKAPVCMRDTVMYNAMITGFSHNNDGY 130
Query: 47 SAVLKSCT-----------SLADILLGKAL-----------HGYVTKLGHISCQAVSKAL 84
SA+ C + A +L G AL H K G +VS AL
Sbjct: 131 SAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNAL 190
Query: 85 LNLYAKCG----VIDDCYKLFGQVDNTDPVTWNILLSGFA-----------CSHVDD--- 126
+++Y+KC ++ K+F ++ D +W +++G+ +DD
Sbjct: 191 VSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMK 250
Query: 127 ---------ARVMNLFYN-------MHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHA 170
V FY V + + T V+ ACA G + GK +HA
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 171 YVIKFGLERHTL-VGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAV----------- 218
YV++ E + NSL S+Y K G +A ++F+ + KD+VSWNA+
Sbjct: 311 YVLR--REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 219 --------------------ISGLSENKVLGDAFRLFSWMLTEPIKPNYATILNILPICA 258
ISGL+EN + +LFS M E +P + CA
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 259 SLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGRTEEAELLFRRMKSRDLV 318
L Y G++ H +L+ + +S NAL++ Y + G EEA +FR M D V
Sbjct: 429 VLG---AYCNGQQYHAQLLKIG-FDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSV 484
Query: 319 SWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLPACAYLKNLKVGKE 374
SWNA+IA + +A++++ E++ K+ I PD +TL+++L AC++ + G++
Sbjct: 485 SWNALIAALGQHGHGAEAVDVYEEML-KKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 176/426 (41%), Gaps = 45/426 (10%)
Query: 386 EEDAAVGNALVSFYAKCSDMEAAYRTF--LMICRRDLISWNSMLDAFSESGYNSQFLNLL 443
E D +VS Y D+ A F +C RD + +N+M+ FS + +NL
Sbjct: 77 EPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 444 NCMLMEGIRPDSITILTIIHFCTTVL-REGMVKETHGYLIKTGLLLGDTEHNIGNAILDA 502
M EG +PD+ T +++ V E + H +K+G ++ NA++
Sbjct: 137 CKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSG---AGYITSVSNALVSV 193
Query: 503 YAKCRN----IKYAFNVFQSLLEKRNLVTFNPVISGYANCGSADEAFMTFSRIYAR-DLT 557
Y+KC + + A VF +LEK + ++ +++GY G D + L
Sbjct: 194 YSKCASSPSLLHSARKVFDEILEK-DERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252
Query: 558 PWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYV 617
+N MI Y F +AL + ++ + G++ D T S++ C+ + L +Q H YV
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 618 IRACFDGVRLNGALLHLYAKCGSIFSASKIFQCHPQKDVVMLTAMIGGY----------- 666
+R + +L+ LY KCG A IF+ P KD+V A++ GY
Sbjct: 313 LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 667 --------------------AMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGL 706
A +G G+ LK+FS M G P + + +C+ G
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 707 VDEGLEIFRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLL 766
G + + K+ G + +L+ + A+ G + +A + MP D W L+
Sbjct: 433 YCNGQQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALI 490
Query: 767 GACRIH 772
A H
Sbjct: 491 AALGQH 496
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 159/371 (42%), Gaps = 58/371 (15%)
Query: 473 MVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVI 532
+ + HG +I G +I N ++D Y K + YA +F + E + + ++
Sbjct: 32 LARAVHGNIITFGF---QPRAHILNRLIDVYCKSSELNYARQLFDEISEP-DKIARTTMV 87
Query: 533 SGYANCGSADEAFMTFSR--IYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPD 590
SGY G A F + + RD +N MI ++ N+ A++LF K++ +G KPD
Sbjct: 88 SGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147
Query: 591 AVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDG----VRLNGALLHLYAKCGS----IF 642
T S+L + +A +QC + A G ++ AL+ +Y+KC S +
Sbjct: 148 NFTFASVLAGLALVADDE--KQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 643 SASKIFQCHPQKD--------------------------------VVMLTAMIGGYAMHG 670
SA K+F +KD +V AMI GY G
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 671 MGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQY 730
+ AL++ M+ G+ D +V+ AC+ AGL+ G ++ + + + +
Sbjct: 266 FYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN- 324
Query: 731 ASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLF--EM 788
SLV L + G+ +A ++ +MP + D W LL V G + +L EM
Sbjct: 325 -SLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSG-----YVSSGHIGEAKLIFKEM 377
Query: 789 EADNIGNYVVM 799
+ NI ++++M
Sbjct: 378 KEKNILSWMIM 388
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 14/227 (6%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
M E N SW+ +I+G +G +E L LF+ FS +KSC L
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFS--CMKREGFEPCDYAFSGAIKSCAVLGAYC 434
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFA 120
G+ H + K+G S + AL+ +YAKCGV+++ ++F + D V+WN L++
Sbjct: 435 NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALG 494
Query: 121 CSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLH-----AYVIKF 175
H A ++++ M ++ +P+ +T+ VL+AC+ G + G+ Y I
Sbjct: 495 -QHGHGAEAVDVYEEM-LKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPP 552
Query: 176 GLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVS-WNAVISG 221
G + + L + + G DA SV +S+ K W A++SG
Sbjct: 553 GADHYA----RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 6/142 (4%)
Query: 598 LPVCSQMASVHLLRQCHGYVIRACFDG-VRLNGALLHLYAKCGSIFSASKIFQCHPQKDV 656
LP+ + S+ L R HG +I F + L+ +Y K + A ++F + D
Sbjct: 23 LPL--RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDK 80
Query: 657 VMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRS 716
+ T M+ GY G A VF D V+ A+++ SH + +F
Sbjct: 81 IARTTMVSGYCASGDITLARGVFEKAPV--CMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 717 IEKVQGIKPTPEQYASLVDLLA 738
+ K +G KP +AS++ LA
Sbjct: 139 M-KHEGFKPDNFTFASVLAGLA 159
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 326 bits (836), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 183/575 (31%), Positives = 306/575 (53%), Gaps = 45/575 (7%)
Query: 299 FGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVS 358
FG A +F + + WNAII GY+ N+ + AL ++ + + PDS T
Sbjct: 66 FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPH 124
Query: 359 LLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTF--LMIC 416
LL AC+ L +L++G+ +H R + + D V N L++ YAKC + +A F L +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGF-DADVFVQNGLIALYAKCRRLGSARTVFEGLPLP 183
Query: 417 RRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIH--FCTTVLREGMV 474
R ++SW +++ A++++G + L + + M ++PD + ++++++ C L++G
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG-- 241
Query: 475 KETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISG 534
+ H ++K GL + E L++ N +
Sbjct: 242 RSIHASVVKMGLEI--------------------------------EPDLLISLNTM--- 266
Query: 535 YANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDAVTI 594
YA CG A + F ++ + +L WN MI YA+N + +A+ +F ++ + ++PD ++I
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 595 MSLLPVCSQMASVHLLRQCHGYVIRACF-DGVRLNGALLHLYAKCGSIFSASKIFQCHPQ 653
S + C+Q+ S+ R + YV R+ + D V ++ AL+ ++AKCGS+ A +F
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 654 KDVVMLTAMIGGYAMHGMGKAALKVFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEI 713
+DVV+ +AMI GY +HG + A+ ++ M GV+P+ V +L AC+H+G+V EG
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 446
Query: 714 FRSIEKVQGIKPTPEQYASLVDLLARGGQISDAYSLVNRMPVEADCNVWGTLLGACRIHH 773
F + I P + YA ++DLL R G + AY ++ MPV+ VWG LL AC+ H
Sbjct: 447 FNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505
Query: 774 EVELGRVVANRLFEMEADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWI 833
VELG A +LF ++ N G+YV +SNLYAA WD V E+R MK + L K CSW+
Sbjct: 506 HVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565
Query: 834 EVERKNNAFMAGDYSHPRRDMIYWVLSILDEQIKD 868
EV + AF GD SHPR + I + ++ ++K+
Sbjct: 566 EVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600
Score = 173 bits (438), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 248/526 (47%), Gaps = 55/526 (10%)
Query: 166 KSLHAYVIKFGLERHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSEN 225
K +HA ++ GL+ + L + G + A VFD + + WNA+I G S N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 226 KVLGDAFRLFSWMLTEPIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIAD 285
DA ++S M + P+ T ++L C+ L GR +H V R AD
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH---LQMGRFVHAQVFRLG-FDAD 153
Query: 286 VSVCNALVSFYLRFGRTEEAELLFR--RMKSRDLVSWNAIIAGYASNDEWLKALNLFCEL 343
V V N L++ Y + R A +F + R +VSW AI++ YA N E ++AL +F ++
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 344 ITKEMIWPDSVTLVSLLPACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCS 403
K + PD V LVS+L A L++LK G+ IH ++ LE + + +L + YAKC
Sbjct: 214 -RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG-LEIEPDLLISLNTMYAKCG 271
Query: 404 DMEAAYRTFLMICRRDLISWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIH 463
+ A F + +LI WN+M+ ++++GY + +++ + M+ + +RPD+I+I + I
Sbjct: 272 QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAIS 331
Query: 464 FCTTVLREGMVKETHGYLIKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKR 523
C V + + Y+ ++ + I +A++D +AKC +++ A VF L+ R
Sbjct: 332 ACAQVGSLEQARSMYEYVGRSDY---RDDVFISSALIDMFAKCGSVEGARLVFDRTLD-R 387
Query: 524 NLVTFNPVISGYANCGSADEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQ 583
++V ++ +I GY G A E A+SL+ ++
Sbjct: 388 DVVVWSAMIVGYGLHGRARE-------------------------------AISLYRAME 416
Query: 584 AQGMKPDAVTIMSLLPVCSQMASVHLLRQCHGYVIRACFDGVRLN----GALLHLYAKCG 639
G+ P+ VT + LL C+ ++R+ + R + ++ L + G
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSG---MVREGWWFFNRMADHKINPQQQHYACVIDLLGRAG 473
Query: 640 SIFSASKIFQCHP-QKDVVMLTAMIGGYAMH---GMGK-AALKVFS 680
+ A ++ +C P Q V + A++ H +G+ AA ++FS
Sbjct: 474 HLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFS 519
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 197/377 (52%), Gaps = 17/377 (4%)
Query: 1 MAEPNAKSWITIINGFCRDGLHKEALSLFAHELQSSPSVRHNHQLFSAVLKSCTSLADIL 60
+ P W II G+ R+ ++AL ++++ V + F +LK+C+ L+ +
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSN--MQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 61 LGKALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFG--QVDNTDPVTWNILLSG 118
+G+ +H V +LG + V L+ LYAKC + +F + V+W ++S
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 119 FACSHVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLE 178
+A + + + +F M D KP+ V + VL+A L + G+S+HA V+K GLE
Sbjct: 197 YA-QNGEPMEALEIFSQMRKMD-VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 179 RHTLVGNSLTSMYAKRGLVHDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWM 238
+ SL +MYAK G V A +FD ++ +++ WNA+ISG ++N +A +F M
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 239 LTEPIKPNYATILNILPICA---SLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSF 295
+ + ++P+ +I + + CA SL++ R ++ YV R++ DV + +AL+
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQ------ARSMYEYV-GRSDYRDDVFISSALIDM 367
Query: 296 YLRFGRTEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVT 355
+ + G E A L+F R RD+V W+A+I GY + +A++L+ + + + P+ VT
Sbjct: 368 FAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLY-RAMERGGVHPNDVT 426
Query: 356 LVSLLPACAYLKNLKVG 372
+ LL AC + ++ G
Sbjct: 427 FLGLLMACNHSGMVREG 443
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Query: 673 KAALK-VFSDMLELGVNPDHVVITAVLSACSHAGLVDEGLEIFRSIEKVQGIKPTPEQYA 731
KA LK + + +L LG+ +IT ++ A S G + ++F + + Q I P +
Sbjct: 34 KAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ-IFP----WN 88
Query: 732 SLVDLLARGGQISDA---YSLVNRMPVEADCNVWGTLLGACRIHHEVELGRVVANRLFEM 788
+++ +R DA YS + V D + LL AC +++GR V ++F +
Sbjct: 89 AIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRL 148
Query: 789 EADNIGNYVVMSNLYAADARWDGVVEIRKLMKTRDLKKPAACSWIEV 835
D + V + L A A+ + R + + L + SW +
Sbjct: 149 GFD--ADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 319,157,791
Number of Sequences: 539616
Number of extensions: 13142378
Number of successful extensions: 49085
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 36228
Number of HSP's gapped (non-prelim): 3393
length of query: 875
length of database: 191,569,459
effective HSP length: 126
effective length of query: 749
effective length of database: 123,577,843
effective search space: 92559804407
effective search space used: 92559804407
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 66 (30.0 bits)