BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002839
(874 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/855 (61%), Positives = 654/855 (76%), Gaps = 30/855 (3%)
Query: 38 TVVLMKKNVLDFN-------------DFNASFLDRFHELLGRKVTLQLISAVHGEPAENG 84
TVVLM+KNVLD N D S LD LGR V+LQLISA + NG
Sbjct: 15 TVVLMRKNVLDVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRSVSLQLISATKAD--ANG 72
Query: 85 LQAGKIGKLAHIEGWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTL 144
GK+GK +EG I L AG+SAF + FEWD+ G+PGAF I+N +EF+L +L
Sbjct: 73 --KGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFLVSL 130
Query: 145 TLEDVPGEGRVHFVCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGD 204
TLED+P G +HFVCNSW+Y AK + +DRIFF N+TYLP++TP PL YRE+EL NLRGD
Sbjct: 131 TLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNLRGD 190
Query: 205 VTTELQEHDRVYDYAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSE 263
T E +E +R+YDY YNDLGDP KG+ RPVLGG+ +PYPRRGRTGRK +D SE
Sbjct: 191 GTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRTGRKPTRKDPNSE 250
Query: 264 SRLSIVYSLNIYVPRDERFGHLKMSDFLAFALKSIAQVIKPALES---LDSSPNEFDSFD 320
SR S ++Y+PRDE FGHLK SDFL + LKS++Q + P L+S L+ +P EFDSFD
Sbjct: 251 SR-----SNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAFDLNFTPREFDSFD 305
Query: 321 DILKLYEGGIDLPNNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDE 379
++ LY GGI LP +++ I P +LKEIFRTDG+ LKFP P+VI+ +SAW TDE
Sbjct: 306 EVHGLYSGGIKLPTDIISKIS---PLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDE 362
Query: 380 EFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKN 439
EF REMLAG+NP +I CLK+FPP SKL+ ++YG+ S IT+ +E NL+GLTVDEAI+
Sbjct: 363 EFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEGLTVDEAIQNK 422
Query: 440 KLFILDHHDSLMTYLRRINTTSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAV 499
+LF+LDHHD +M YLRRIN TSTK YA+RTILFLK DGTL+P+AIELSLPHP GDQ GA
Sbjct: 423 RLFLLDHHDPIMPYLRRINATSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSGAF 482
Query: 500 SKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHP 559
S+V+ P+++GV+ SIW LAKAYV VNDS +HQL+SHWLNTHA +EPF+IATNR LSV+HP
Sbjct: 483 SQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLSVVHP 542
Query: 560 IYKLLHPHFRDTMNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPE 619
IYKLLHPH+RDTMNIN AR L+N GGV+E T G+Y++E+S+ +YK W F +QALP
Sbjct: 543 IYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSVEMSAVVYKDWVFTDQALPA 602
Query: 620 DLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDS 679
DL KRG+A+EDP+ PHG+RL+IEDYPY VDGLEIW +IK WV +Y + YYK+DD ++ED
Sbjct: 603 DLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWVHEYVFLYYKSDDTLREDP 662
Query: 680 ELQSWWKELREEGHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGY 739
ELQ+ WKEL E GHGDKK+EPWWPKMQ REEL+++C IIIW ASALHAA+NFGQYPY G
Sbjct: 663 ELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNFGQYPYGGL 722
Query: 740 LPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVY 799
+ NRPT+SRRFMPE+G+ EY+EL NP K +LKTIT + QT++ +S+IEILSRH++DEVY
Sbjct: 723 ILNRPTLSRRFMPEKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHASDEVY 782
Query: 800 LGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTS 859
LG+RD P WTSD L+AF FG KLA++E K+ RN+++ L+NR GPV+MPYTLL+P+S
Sbjct: 783 LGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSS 842
Query: 860 EGGLTGKGIPNSVSI 874
+ GLT +GIPNS+SI
Sbjct: 843 KEGLTFRGIPNSISI 857
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 1078 bits (2788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/855 (60%), Positives = 652/855 (76%), Gaps = 30/855 (3%)
Query: 38 TVVLMKKNVLDFN-------------DFNASFLDRFHELLGRKVTLQLISAVHGEPAENG 84
TVVLM+KNVLD N D S LD LGR V+LQLISA + NG
Sbjct: 15 TVVLMRKNVLDVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRSVSLQLISATKAD--ANG 72
Query: 85 LQAGKIGKLAHIEGWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTL 144
GK+GK +EG I L AG+SAF + FEWD+ G+PGAF I+N +EF+L +L
Sbjct: 73 --KGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFLVSL 130
Query: 145 TLEDVPGEGRVHFVCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGD 204
TLED+P G +HFVCNSW+Y AK + +DRIFF N+TYLP++TP PL YRE+EL NLRGD
Sbjct: 131 TLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNLRGD 190
Query: 205 VTTELQEHDRVYDYAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSE 263
T E +E +R+YDY YNDLGDP KG+ RPVLGG+ +PYPRRGRTGRK +D SE
Sbjct: 191 GTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRTGRKPTRKDPNSE 250
Query: 264 SRLSIVYSLNIYVPRDERFGHLKMSDFLAFALKSIAQVIKPALES---LDSSPNEFDSFD 320
SR S ++Y+PRDE FGHLK SDFL + LKS++Q + P L+S L+ +P EFDSFD
Sbjct: 251 SR-----SNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAFDLNFTPREFDSFD 305
Query: 321 DILKLYEGGIDLPNNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDE 379
++ LY GGI LP +++ I P +LKEIFRTDG+ LKFP P+VI+ +SAW TDE
Sbjct: 306 EVHGLYSGGIKLPTDIISKIS---PLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDE 362
Query: 380 EFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKN 439
EF REMLAG+NP +I CLK+FPP SKL+ ++YG+ S IT+ +E NL+GLTVDEAI+
Sbjct: 363 EFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEGLTVDEAIQNK 422
Query: 440 KLFILDHHDSLMTYLRRINTTSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAV 499
+LF+LDHHD +M YLRRIN TSTK YA+RTILFLK DGTL+P+AIELSLPHP GDQ GA
Sbjct: 423 RLFLLDHHDPIMPYLRRINATSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSGAF 482
Query: 500 SKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHP 559
S+V+ P+++GV+ SIW LAKAYV VNDS +HQL+SH LNTHA +EPF+IATNR LSV+HP
Sbjct: 483 SQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHXLNTHAVVEPFIIATNRHLSVVHP 542
Query: 560 IYKLLHPHFRDTMNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPE 619
IYKLLHPH+RDTMNIN AR +N GGV+E T G+Y++E+S+ +YK W F +QALP
Sbjct: 543 IYKLLHPHYRDTMNINGLARLSXVNDGGVIEQTFLWGRYSVEMSAVVYKDWVFTDQALPA 602
Query: 620 DLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDS 679
DL KRG+A+EDP+ PHG+RL+IEDYPY VDGLEIW +IK WV +Y + YYK+DD ++ED
Sbjct: 603 DLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWVHEYVFLYYKSDDTLREDP 662
Query: 680 ELQSWWKELREEGHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGY 739
ELQ+ WKEL E GHGDKK+EPWWPKMQ REEL+++C IIIW ASALHAA+NFGQYPY G
Sbjct: 663 ELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNFGQYPYGGL 722
Query: 740 LPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVY 799
+ NRPT+SRRFMPE+G+ EY+EL NP K +LKTIT + QT++ +S+IEILSRH++DEVY
Sbjct: 723 ILNRPTLSRRFMPEKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHASDEVY 782
Query: 800 LGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTS 859
LG+RD P WTSD L+AF FG KLA++E K+ RN+++ L+NR GPV+MPYTLL+P+S
Sbjct: 783 LGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSS 842
Query: 860 EGGLTGKGIPNSVSI 874
+ GLT +GIPNS+SI
Sbjct: 843 KEGLTFRGIPNSISI 857
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 1021 bits (2639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/856 (58%), Positives = 641/856 (74%), Gaps = 35/856 (4%)
Query: 38 TVVLMKKNVLDFN-------------DFNASFLDRFHELLGRKVTLQLISAVHGEPAENG 84
T+V+M+KNVLD N DF S LD L +++QLISA + +
Sbjct: 14 TMVVMQKNVLDINSITSVDGIVGTGLDFLGSALDTV-TFLASSISIQLISATKADGGK-- 70
Query: 85 LQAGKIGKLAHIEGWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTL 144
GK+GK ++ G I T + A E A++ F+WD D G+PGAF I+N +EFYLK+L
Sbjct: 71 ---GKVGKATNLRGKITLPT-IGAKEEAYDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSL 126
Query: 145 TLEDVPGEGRVHFVCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGD 204
LED+P G +HF+CNSWVY +K Y TDRIFF N TYLP++TP PL YRE+EL N+RGD
Sbjct: 127 ILEDIPNHGTIHFICNSWVYNSKHYKTDRIFFANNTYLPSETPAPLVKYREEELKNVRGD 186
Query: 205 VTTELQEHDRVYDYAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGR-KLAEDSKSE 263
T E +E DR+YDY YNDLGDP KG+K+ RPVLGGSA PYPRRGRTGR K +D SE
Sbjct: 187 GTGERKEWDRIYDYDVYNDLGDPDKGEKYARPVLGGSA-LPYPRRGRTGRGKTRKDPNSE 245
Query: 264 SRLSIVYSLNIYVPRDERFGHLKMSDFLAFALKSIAQVIKPAL-ESLDSS--PNEFDSFD 320
VY +PRDE FGHLK SDFLA+ +KS+AQ + P L ++ D + +FD+F
Sbjct: 246 KPGDFVY-----LPRDEAFGHLKSSDFLAYGIKSVAQDVLPVLTDAFDGNLLSLDFDNFA 300
Query: 321 DILKLYEGGIDLPNNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDE 379
++ KLYEGG+ LP N L +I P ++KE+FRTDG+ LK+P P+V++ D+SAW TDE
Sbjct: 301 EVRKLYEGGVTLPTNFLSNI---TPIPIIKELFRTDGEQFLKYPPPKVMQVDKSAWMTDE 357
Query: 380 EFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKN 439
EF RE +AGLNP VI ++EFP +SKL+ + YG+ IT+ +E NL GLTV++AI+
Sbjct: 358 EFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDHTCIITKEHLEPNLGGLTVEQAIQNK 417
Query: 440 KLFILDHHDSLMTYLRRINTTSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAV 499
KLFILDHHD L+ YLR+IN +TKTYA+RTI FLK DGTL P+AIELS PHP G++YG V
Sbjct: 418 KLFILDHHDYLIPYLRKINANTTKTYATRTIFFLKNDGTLTPLAIELSKPHPQGEEYGPV 477
Query: 500 SKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHP 559
S+VY PS +GV+ IW LAKAYV VND+ +HQ+ISHWLNTHA +EPFVIATNR LSV+HP
Sbjct: 478 SEVYVPSSEGVEAYIWLLAKAYVVVNDACYHQIISHWLNTHAVVEPFVIATNRHLSVVHP 537
Query: 560 IYKLLHPHFRDTMNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPE 619
IYKLL PH+RDTMNIN+ AR+ L+NA G++E T G+Y++E+S+ +YK W F +QALP
Sbjct: 538 IYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWGRYSLEMSAVIYKDWVFTDQALPN 597
Query: 620 DLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDS 679
DL KRGVAV+DP++PHG+RLLIEDYPYA DGLEIW +IK WV++Y FYYK+D+ +++D
Sbjct: 598 DLVKRGVAVKDPSAPHGVRLLIEDYPYASDGLEIWDAIKSWVEEYVSFYYKSDEELQKDP 657
Query: 680 ELQSWWKELREEGHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGY 739
ELQ+WWKEL E GHGD KD+PWW KMQ REEL+++ +IW+ASALHAA+NFGQYPY G
Sbjct: 658 ELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASATLIWIASALHAAVNFGQYPYGGL 717
Query: 740 LPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVY 799
+ NRPTISRRFMPE+G+PEYD L NP+K FLKTIT + +T++ +++IEILSRH++DE Y
Sbjct: 718 ILNRPTISRRFMPEKGSPEYDALAKNPEKEFLKTITGKKETLIDLTIIEILSRHASDEFY 777
Query: 800 LGQRDTPE-WTSDEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPT 858
LGQRD + WTSD PL+AF FGK L E+E+K+I +N+++ L+NR GP KMPYTLL P+
Sbjct: 778 LGQRDGGDYWTSDAGPLEAFKRFGKNLEEIEKKLIEKNNDETLRNRYGPAKMPYTLLYPS 837
Query: 859 SEGGLTGKGIPNSVSI 874
SE GLT +GIPNS+SI
Sbjct: 838 SEEGLTFRGIPNSISI 853
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/844 (59%), Positives = 633/844 (75%), Gaps = 22/844 (2%)
Query: 38 TVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIE 97
TVVLM KN L+ N + S +D + LGR V+LQLISA + GK+GK +E
Sbjct: 11 TVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKAD----AHGKGKVGKDTFLE 65
Query: 98 GWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHF 157
G L AGESAFN+ FEWD +G+PGAF I+N EF+LK+LTLE + +G + F
Sbjct: 66 GINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRF 125
Query: 158 VCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYD 217
VCNSWVY K Y + RIFF N TY+P++TP PL YRE+EL +LRG+ T E +E+DR+YD
Sbjct: 126 VCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYD 185
Query: 218 YAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSESRLSIVYSLNIYV 276
Y YNDLG+P K +K RPVLGGS+ +PYPRRGRTGR D +E + + YV
Sbjct: 186 YDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEV-----FYV 240
Query: 277 PRDERFGHLKMSDFLAFALKSIAQVIKPALES---LDSSPNEFDSFDDILKLYEGGIDLP 333
PRDE GHLK D L KS++Q+++PA ES L S+P EF SF D+ LYEGGI LP
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP 300
Query: 334 NNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPV 392
+++ I IP ++KE++RTDG +LKFP P V++ +SAW TDEEF REM+AG+NP
Sbjct: 301 RDVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357
Query: 393 VICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMT 452
VI L+EFPP S L+P +YG+Q S IT + ++ LDG T+DEA+ +LF+LD+HD M
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMP 415
Query: 453 YLRRINT-TSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVK 511
Y+R+IN S KTYA+RTILFL+ DGTLKPVAIELSLPH GD AVS+V P+++GV+
Sbjct: 416 YVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475
Query: 512 GSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDT 571
+IW LAKAYV VNDS +HQL+SHWLNTHAA+EPFVIAT+R LSVLHPIYKLL PH+R+
Sbjct: 476 STIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNN 535
Query: 572 MNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDP 631
MNINA ARQ LINA G+LE T P KY++E+SSA+YK+W F +QALP DL KRGVA++DP
Sbjct: 536 MNINALARQSLINANGILETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDP 595
Query: 632 NSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREE 691
++PHG+RLLIEDYPYA DGLEIWA+IK WVQ+Y YY DD VK DSELQ WWKE E+
Sbjct: 596 STPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEK 655
Query: 692 GHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFM 751
GHGD KD+PWWPK+Q E+L++ C IIIW+ASALHAA+NFGQYPY G + NRPT SRR +
Sbjct: 656 GHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLL 715
Query: 752 PEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSD 811
PE+GTPEY+E+ +N +K +L+TIT++L T++ +S+IEILS H++DEVYLGQRD P WTSD
Sbjct: 716 PEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSD 775
Query: 812 EAPLQAFDEFGKKLAEVEEKIISRNHNKNLK-NRVGPVKMPYTLLVPTSEGGLTGKGIPN 870
LQAF +FG KL E+EEK++ RN++ +L+ NR+GPV++PYTLL P+SE GLT +GIPN
Sbjct: 776 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPN 835
Query: 871 SVSI 874
S+SI
Sbjct: 836 SISI 839
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 1019 bits (2635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/844 (58%), Positives = 633/844 (75%), Gaps = 22/844 (2%)
Query: 38 TVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIE 97
TVVLM KN L+ N + S +D + LGR V+LQLISA + GK+GK +E
Sbjct: 11 TVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKAD----AHGKGKVGKDTFLE 65
Query: 98 GWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHF 157
G L AGESAFN+ FEWD +G+PGAF I+N EF+LK+LTLE + +G + F
Sbjct: 66 GINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRF 125
Query: 158 VCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYD 217
VCNSWVY K Y + RIFF N TY+P++TP PL YRE+EL +LRG+ T E +E+DR+YD
Sbjct: 126 VCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYD 185
Query: 218 YAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSESRLSIVYSLNIYV 276
Y YNDLG+P K +K RPVLGGS+ +PYPRRGRTGR D +E + + YV
Sbjct: 186 YDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEV-----FYV 240
Query: 277 PRDERFGHLKMSDFLAFALKSIAQVIKPALES---LDSSPNEFDSFDDILKLYEGGIDLP 333
PRDE GHLK D L KS++Q+++PA ES L S+P EF SF D+ LYEGGI LP
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP 300
Query: 334 NNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPV 392
+++ I IP ++KE++RTDG +LKFP P V++ +SAW TDEEF REM+AG+NP
Sbjct: 301 RDVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357
Query: 393 VICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMT 452
VI L+EFPP S L+P +YG+Q S IT + ++ LDG T+DEA+ +LF+LD+HD M
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMP 415
Query: 453 YLRRINT-TSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVK 511
Y+R+IN S KTYA+RTILFL+ DGTLKPVAIELSLPH GD AVS+V P+++GV+
Sbjct: 416 YVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475
Query: 512 GSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDT 571
+IW LAKAYV VNDS +HQL+SHWLNTHAA+EPFVIAT+R LSVLHPIYKLL PH+R+
Sbjct: 476 STIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNN 535
Query: 572 MNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDP 631
MNINA ARQ LINA G++E T P KY++E+SSA+YK+W F +QALP DL KRGVA++DP
Sbjct: 536 MNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDP 595
Query: 632 NSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREE 691
++PHG+RLLIEDYPYA DGLEIWA+IK WVQ+Y YY DD VK DSELQ WWKE E+
Sbjct: 596 STPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEK 655
Query: 692 GHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFM 751
GHGD KD+PWWPK+Q E+L++ C IIIW+ASALHAA+NFGQYPY G + NRPT SRR +
Sbjct: 656 GHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLL 715
Query: 752 PEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSD 811
PE+GTPEY+E+ +N +K +L+TIT++L T++ +S+IEILS H++DEVYLGQRD P WTSD
Sbjct: 716 PEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSD 775
Query: 812 EAPLQAFDEFGKKLAEVEEKIISRNHNKNLK-NRVGPVKMPYTLLVPTSEGGLTGKGIPN 870
LQAF +FG KL E+EEK++ RN++ +L+ NR+GPV++PYTLL P+SE GLT +GIPN
Sbjct: 776 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPN 835
Query: 871 SVSI 874
S+SI
Sbjct: 836 SISI 839
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 1019 bits (2634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/844 (58%), Positives = 633/844 (75%), Gaps = 22/844 (2%)
Query: 38 TVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIE 97
TVVLM KN L+ N + S +D + LGR V+LQLISA + GK+GK +E
Sbjct: 11 TVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKAD----AHGKGKVGKDTFLE 65
Query: 98 GWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHF 157
G L AGESAFN+ FEWD +G+PGAF I+N EF+LK+LTLE + +G + F
Sbjct: 66 GINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRF 125
Query: 158 VCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYD 217
VCNSWVY K Y + RIFF N TY+P++TP PL YRE+EL +LRG+ T E +E+DR+YD
Sbjct: 126 VCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYD 185
Query: 218 YAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSESRLSIVYSLNIYV 276
Y YNDLG+P K +K RPVLGGS+ +PYPRRGRTGR D +E + + YV
Sbjct: 186 YDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEV-----FYV 240
Query: 277 PRDERFGHLKMSDFLAFALKSIAQVIKPALES---LDSSPNEFDSFDDILKLYEGGIDLP 333
PRDE GHLK D L KS++Q+++PA ES L S+P EF SF D+ LYEGGI LP
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP 300
Query: 334 NNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPV 392
+++ I IP ++KE++RTDG +LKFP P V++ +SAW TDEEF REM+AG+NP
Sbjct: 301 RDVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357
Query: 393 VICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMT 452
VI L+EFPP S L+P +YG+Q S IT + ++ LDG T+DEA+ +LF+LD+HD M
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMP 415
Query: 453 YLRRINT-TSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVK 511
Y+R+IN S KTYA+RTILFL+ DGTLKPVAIELSLPH GD AVS+V P+++GV+
Sbjct: 416 YVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475
Query: 512 GSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDT 571
+IW LAKAYV VNDS +HQL+SHWLNTHAA+EPFVIAT+R LSVLHPIYKLL PH+R+
Sbjct: 476 STIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNN 535
Query: 572 MNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDP 631
MNINA ARQ LINA G++E T P KY++E+SSA+YK+W F +QALP DL KRGVA++DP
Sbjct: 536 MNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDP 595
Query: 632 NSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREE 691
++PHG+RLLIEDYPYA DGLEIWA+IK WVQ+Y YY DD VK DSELQ WWKE E+
Sbjct: 596 STPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEK 655
Query: 692 GHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFM 751
GHGD KD+PWWPK+Q E+L++ C IIIW+ASALHAA+NFGQYPY G + NRPT SRR +
Sbjct: 656 GHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLL 715
Query: 752 PEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSD 811
PE+GTPEY+E+ +N +K +L+TIT++L T++ +S+IEILS H++DEVYLGQRD P WTSD
Sbjct: 716 PEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSD 775
Query: 812 EAPLQAFDEFGKKLAEVEEKIISRNHNKNLK-NRVGPVKMPYTLLVPTSEGGLTGKGIPN 870
LQAF +FG KL E+EEK++ RN++ +L+ NR+GPV++PYTLL P+SE GLT +GIPN
Sbjct: 776 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPN 835
Query: 871 SVSI 874
S+SI
Sbjct: 836 SISI 839
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/844 (58%), Positives = 633/844 (75%), Gaps = 22/844 (2%)
Query: 38 TVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIE 97
TVVLM KN L+ N + S +D + LGR V+LQLISA + GK+GK +E
Sbjct: 11 TVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKAD----AHGKGKVGKDTFLE 65
Query: 98 GWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHF 157
G L AGESAFN+ FEWD +G+PGAF I+N EF+LK+LTLE + +G + F
Sbjct: 66 GINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRF 125
Query: 158 VCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYD 217
VCNSWVY K Y + RIFF N TY+P++TP PL YRE+EL +LRG+ T E +E+DR+YD
Sbjct: 126 VCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYD 185
Query: 218 YAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSESRLSIVYSLNIYV 276
Y YNDLG+P K +K RPVLGGS+ +PYPRRGRTGR D +E + + YV
Sbjct: 186 YDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEV-----FYV 240
Query: 277 PRDERFGHLKMSDFLAFALKSIAQVIKPALES---LDSSPNEFDSFDDILKLYEGGIDLP 333
PRDE GHLK D L KS++Q+++PA ES L S+P EF SF D+ LYEGGI LP
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP 300
Query: 334 NNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPV 392
+++ I IP ++KE++RTDG +LKFP P V++ +SAW TDEEF REM+AG+NP
Sbjct: 301 RDVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357
Query: 393 VICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMT 452
VI L+EFPP S L+P +YG+Q S IT + ++ LDG T+DEA+ +LF+LD+HD M
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMP 415
Query: 453 YLRRINT-TSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVK 511
Y+R+IN S KTYA+RTILFL+ DGTLKPVAIELSLPH GD AVS+V P+++GV+
Sbjct: 416 YVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475
Query: 512 GSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDT 571
+IW LAKAYV VNDS +HQL+SHWLNTHAA+EPFVIAT+R LSVLHPIYKLL PH+R+
Sbjct: 476 STIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNN 535
Query: 572 MNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDP 631
MNINA ARQ LINA G++E T P KY++E+SSA+YK+W F +QALP DL KRGVA++DP
Sbjct: 536 MNINALARQSLINANGIVETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDP 595
Query: 632 NSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREE 691
++PHG+RLLIEDYPYA DGLEIWA+IK WVQ+Y YY DD VK DSELQ WWKE E+
Sbjct: 596 STPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEK 655
Query: 692 GHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFM 751
GHGD KD+PWWPK+Q E+L++ C IIIW+ASALHAA+NFGQYPY G + NRPT SRR +
Sbjct: 656 GHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLL 715
Query: 752 PEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSD 811
PE+GTPEY+E+ +N +K +L+TIT++L T++ +S+IEILS H++DEVYLGQRD P WTSD
Sbjct: 716 PEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSD 775
Query: 812 EAPLQAFDEFGKKLAEVEEKIISRNHNKNLK-NRVGPVKMPYTLLVPTSEGGLTGKGIPN 870
LQAF +FG KL E+EEK++ RN++ +L+ NR+GPV++PYTLL P+SE GLT +GIPN
Sbjct: 776 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPN 835
Query: 871 SVSI 874
S+SI
Sbjct: 836 SISI 839
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 1017 bits (2630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/844 (58%), Positives = 633/844 (75%), Gaps = 22/844 (2%)
Query: 38 TVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIE 97
TVVLM KN L+ N + S +D + LGR V+LQLISA + GK+GK +E
Sbjct: 11 TVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKAD----AHGKGKVGKDTFLE 65
Query: 98 GWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHF 157
G L AGESAFN+ FEWD +G+PGAF I+N EF+LK+LTLE + +G + F
Sbjct: 66 GINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRF 125
Query: 158 VCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYD 217
VCNSWVY K Y + RIFF N TY+P++TP PL YRE+EL +LRG+ T E +E+DR+YD
Sbjct: 126 VCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYD 185
Query: 218 YAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSESRLSIVYSLNIYV 276
Y YNDLG+P K +K RPVLGGS+ +PYPRRGRTGR D +E + + YV
Sbjct: 186 YDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEV-----FYV 240
Query: 277 PRDERFGHLKMSDFLAFALKSIAQVIKPALES---LDSSPNEFDSFDDILKLYEGGIDLP 333
PRDE GHLK D L KS++Q+++PA ES L S+P EF SF D+ LYEGGI LP
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP 300
Query: 334 NNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPV 392
+++ I IP ++KE++RTDG +LKFP P V++ +SAW TDEEF REM+AG+NP
Sbjct: 301 RDVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357
Query: 393 VICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMT 452
VI L+EFPP S L+P +YG+Q S IT + ++ LDG T+DEA+ +LF+LD+HD M
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMP 415
Query: 453 YLRRINT-TSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVK 511
Y+R+IN S KTYA+RTILFL+ DGTLKPVAIELSLPH GD AVS+V P+++GV+
Sbjct: 416 YVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475
Query: 512 GSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDT 571
+IW LAKAYV VNDS +HQL+SHWLNTHAA+EPFVIAT+R LSVLHPIYKLL PH+R+
Sbjct: 476 STIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNN 535
Query: 572 MNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDP 631
MNINA ARQ LINA G++E T P KY++E+SSA+YK+W F +QALP DL KRGVA++DP
Sbjct: 536 MNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDP 595
Query: 632 NSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREE 691
++PHG+RLLIEDYPYA DGLEIWA+IK WVQ+Y YY DD VK DSELQ WWKE E+
Sbjct: 596 STPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEK 655
Query: 692 GHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFM 751
GHGD KD+PWWPK+Q E+L++ C IIIW+ASALHAA+NFG+YPY G + NRPT SRR +
Sbjct: 656 GHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGEYPYGGLIMNRPTASRRLL 715
Query: 752 PEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSD 811
PE+GTPEY+E+ +N +K +L+TIT++L T++ +S+IEILS H++DEVYLGQRD P WTSD
Sbjct: 716 PEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSD 775
Query: 812 EAPLQAFDEFGKKLAEVEEKIISRNHNKNLK-NRVGPVKMPYTLLVPTSEGGLTGKGIPN 870
LQAF +FG KL E+EEK++ RN++ +L+ NR+GPV++PYTLL P+SE GLT +GIPN
Sbjct: 776 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPN 835
Query: 871 SVSI 874
S+SI
Sbjct: 836 SISI 839
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 1017 bits (2630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/844 (58%), Positives = 633/844 (75%), Gaps = 22/844 (2%)
Query: 38 TVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIE 97
TVVLM KN L+ N + S +D + LGR V+LQLISA + GK+GK +E
Sbjct: 11 TVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKAD----AHGKGKVGKDTFLE 65
Query: 98 GWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHF 157
G L AGESAFN+ FEWD +G+PGAF I+N EF+LK+LTLE + +G + F
Sbjct: 66 GINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRF 125
Query: 158 VCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYD 217
VCNSWVY K Y + RIFF N TY+P++TP PL YRE+EL +LRG+ T E +E+DR+YD
Sbjct: 126 VCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYD 185
Query: 218 YAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSESRLSIVYSLNIYV 276
Y YNDLG+P K +K RPVLGGS+ +PYPRRGRTGR D +E + + YV
Sbjct: 186 YDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEV-----FYV 240
Query: 277 PRDERFGHLKMSDFLAFALKSIAQVIKPALES---LDSSPNEFDSFDDILKLYEGGIDLP 333
PRDE GHLK D L KS++Q+++PA ES L S+P EF SF D+ LYEGGI LP
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP 300
Query: 334 NNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPV 392
+++ I IP ++KE++RTDG +LKFP P V++ +SAW TDEEF REM+AG+NP
Sbjct: 301 RDVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357
Query: 393 VICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMT 452
VI L+EFPP S L+P +YG+Q S IT + ++ LDG T+DEA+ +LF+LD+HD M
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMP 415
Query: 453 YLRRINT-TSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVK 511
Y+R+IN S KTYA+RTILFL+ DGTLKPVAIELSLPH GD AVS+V P+++GV+
Sbjct: 416 YVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475
Query: 512 GSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDT 571
+IW LAKAYV VNDS +H+L+SHWLNTHAA+EPFVIAT+R LSVLHPIYKLL PH+R+
Sbjct: 476 STIWLLAKAYVIVNDSCYHELMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNN 535
Query: 572 MNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDP 631
MNINA ARQ LINA G++E T P KY++E+SSA+YK+W F +QALP DL KRGVA++DP
Sbjct: 536 MNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDP 595
Query: 632 NSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREE 691
++PHG+RLLIEDYPYA DGLEIWA+IK WVQ+Y YY DD VK DSELQ WWKE E+
Sbjct: 596 STPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEK 655
Query: 692 GHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFM 751
GHGD KD+PWWPK+Q E+L++ C IIIW+ASALHAA+NFGQYPY G + NRPT SRR +
Sbjct: 656 GHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLL 715
Query: 752 PEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSD 811
PE+GTPEY+E+ +N +K +L+TIT++L T++ +S+IEILS H++DEVYLGQRD P WTSD
Sbjct: 716 PEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSD 775
Query: 812 EAPLQAFDEFGKKLAEVEEKIISRNHNKNLK-NRVGPVKMPYTLLVPTSEGGLTGKGIPN 870
LQAF +FG KL E+EEK++ RN++ +L+ NR+GPV++PYTLL P+SE GLT +GIPN
Sbjct: 776 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPN 835
Query: 871 SVSI 874
S+SI
Sbjct: 836 SISI 839
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 1017 bits (2630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/844 (58%), Positives = 632/844 (74%), Gaps = 22/844 (2%)
Query: 38 TVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIE 97
TVVLM KN L+ N + S +D + LGR V+LQLISA + GK+GK +E
Sbjct: 11 TVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKAD----AHGKGKVGKDTFLE 65
Query: 98 GWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHF 157
G L AGESAFN+ FEWD +G+PGAF I+N EF+LK+LTLE + +G + F
Sbjct: 66 GINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRF 125
Query: 158 VCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYD 217
VCNSWVY K Y + RIFF N TY+P++TP PL YRE+EL +LRG+ T E +E+DR+YD
Sbjct: 126 VCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYD 185
Query: 218 YAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSESRLSIVYSLNIYV 276
Y YNDLG+P K +K RPVLGGS+ +PYPRRGRTGR D +E + + YV
Sbjct: 186 YDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEV-----FYV 240
Query: 277 PRDERFGHLKMSDFLAFALKSIAQVIKPALES---LDSSPNEFDSFDDILKLYEGGIDLP 333
PRDE GHLK D L KS++Q+++PA ES L S+P EF SF D+ LYEGGI LP
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP 300
Query: 334 NNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPV 392
+++ I IP ++KE++RTDG +LKFP P V++ +SAW TDEEF REM+AG+NP
Sbjct: 301 RDVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357
Query: 393 VICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMT 452
VI L+EFPP S L+P +YG+Q S IT + ++ LDG T+DEA+ +LF+LD+HD M
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMP 415
Query: 453 YLRRINT-TSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVK 511
Y+R+IN S KTYA+RTILFL+ DGTLKPVAIELSLPH GD AVS+V P+++GV+
Sbjct: 416 YVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475
Query: 512 GSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDT 571
+IW LAKAYV VNDS +HQL+SHWLNTHAA+EPFVIAT+R LSVLHPIYKLL PH+R+
Sbjct: 476 STIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNN 535
Query: 572 MNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDP 631
MNINA ARQ LINA G+ E T P KY++E+SSA+YK+W F +QALP DL KRGVA++DP
Sbjct: 536 MNINALARQSLINANGIAETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDP 595
Query: 632 NSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREE 691
++PHG+RLLIEDYPYA DGLEIWA+IK WVQ+Y YY DD VK DSELQ WWKE E+
Sbjct: 596 STPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEK 655
Query: 692 GHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFM 751
GHGD KD+PWWPK+Q E+L++ C IIIW+ASALHAA+NFGQYPY G + NRPT SRR +
Sbjct: 656 GHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLL 715
Query: 752 PEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSD 811
PE+GTPEY+E+ +N +K +L+TIT++L T++ +S+IEILS H++DEVYLGQRD P WTSD
Sbjct: 716 PEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSD 775
Query: 812 EAPLQAFDEFGKKLAEVEEKIISRNHNKNLK-NRVGPVKMPYTLLVPTSEGGLTGKGIPN 870
LQAF +FG KL E+EEK++ RN++ +L+ NR+GPV++PYTLL P+SE GLT +GIPN
Sbjct: 776 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPN 835
Query: 871 SVSI 874
S+SI
Sbjct: 836 SISI 839
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 1017 bits (2630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/844 (58%), Positives = 633/844 (75%), Gaps = 22/844 (2%)
Query: 38 TVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIE 97
TVVLM KN L+ N + S +D + LGR V+LQLISA + GK+GK +E
Sbjct: 11 TVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKAD----AHGKGKVGKDTFLE 65
Query: 98 GWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHF 157
G L AGESAFN+ FEWD +G+PGAF I+N EF+LK+LTLE + +G + F
Sbjct: 66 GINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRF 125
Query: 158 VCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYD 217
VCNSWVY K Y + RIFF N TY+P++TP PL YRE+EL +LRG+ T E +E+DR+YD
Sbjct: 126 VCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYD 185
Query: 218 YAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSESRLSIVYSLNIYV 276
Y YNDLG+P K +K RPVLGGS+ +PYPRRGRTGR D +E + + YV
Sbjct: 186 YDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEV-----FYV 240
Query: 277 PRDERFGHLKMSDFLAFALKSIAQVIKPALES---LDSSPNEFDSFDDILKLYEGGIDLP 333
PRDE GHLK D L KS++Q+++PA ES L S+P EF SF D+ LYEGGI LP
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP 300
Query: 334 NNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPV 392
+++ I IP ++KE++RTDG +LKFP P V++ +SAW TDEEF REM+AG+NP
Sbjct: 301 RDVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357
Query: 393 VICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMT 452
VI L+EFPP S L+P +YG+Q S IT + ++ LDG T+DEA+ +LF+LD+HD M
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMP 415
Query: 453 YLRRINT-TSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVK 511
Y+R+IN S KTYA+RTILFL+ DGTLKPVAIELSLPH GD AVS+V P+++GV+
Sbjct: 416 YVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475
Query: 512 GSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDT 571
+IW LAKAYV VNDS +HQL+SHWLNTHAA+EPFVIAT+R LSVLHPIYKLL PH+R+
Sbjct: 476 STIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNN 535
Query: 572 MNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDP 631
MNINA ARQ LINA G++E T P KY++E+SSA+YK+W F +QALP DL KRGVA++DP
Sbjct: 536 MNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDP 595
Query: 632 NSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREE 691
++PHG+RLLIEDYPYA DGLEIWA+IK WVQ+Y YY DD VK DSELQ WWKE E+
Sbjct: 596 STPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEK 655
Query: 692 GHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFM 751
GHGD KD+PWWPK+Q E+L++ C IIIW+ASALHAA++FGQYPY G + NRPT SRR +
Sbjct: 656 GHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVHFGQYPYGGLIMNRPTASRRLL 715
Query: 752 PEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSD 811
PE+GTPEY+E+ +N +K +L+TIT++L T++ +S+IEILS H++DEVYLGQRD P WTSD
Sbjct: 716 PEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSD 775
Query: 812 EAPLQAFDEFGKKLAEVEEKIISRNHNKNLK-NRVGPVKMPYTLLVPTSEGGLTGKGIPN 870
LQAF +FG KL E+EEK++ RN++ +L+ NR+GPV++PYTLL P+SE GLT +GIPN
Sbjct: 776 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPN 835
Query: 871 SVSI 874
S+SI
Sbjct: 836 SISI 839
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 1017 bits (2629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/844 (58%), Positives = 632/844 (74%), Gaps = 22/844 (2%)
Query: 38 TVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIE 97
TVVLM KN L+ N + S +D + LGR V+LQLISA + GK+GK +E
Sbjct: 11 TVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKAD----AHGKGKVGKDTFLE 65
Query: 98 GWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHF 157
G L AGESAFN+ FEWD +G+PGAF I+N EF+LK+LTLE + +G + F
Sbjct: 66 GINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRF 125
Query: 158 VCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYD 217
VCNSWVY K Y + RIFF N TY+P++TP PL YRE+EL +LRG+ T E +E+DR+YD
Sbjct: 126 VCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYD 185
Query: 218 YAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSESRLSIVYSLNIYV 276
Y YNDLG+P K +K RPVLGGS+ +PYPRRGRTGR D +E + + YV
Sbjct: 186 YDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEV-----FYV 240
Query: 277 PRDERFGHLKMSDFLAFALKSIAQVIKPALES---LDSSPNEFDSFDDILKLYEGGIDLP 333
PRDE GHLK D L KS++Q+++PA ES L S+P EF SF D+ LYEGGI LP
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP 300
Query: 334 NNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPV 392
+++ I IP ++KE++RTDG +LKFP P V++ +SAW TDEEF REM+AG+NP
Sbjct: 301 RDVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357
Query: 393 VICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMT 452
VI L+EFPP S L+P +YG+Q S IT + ++ LDG T+DEA+ +LF+LD+HD M
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMP 415
Query: 453 YLRRINT-TSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVK 511
Y+R+IN S KTYA+RTILFL+ DGTLKPVAIELSLPH GD AVS+V P+++GV+
Sbjct: 416 YVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475
Query: 512 GSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDT 571
+IW LAKAYV VNDS +HQL+SHWLNTHAA+EPFVIAT+R LSVLHPIYKLL PH+R+
Sbjct: 476 STIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNN 535
Query: 572 MNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDP 631
MNINA ARQ LINA G+ E T P KY++E+SSA+YK+W F +QALP DL KRGVA++DP
Sbjct: 536 MNINALARQSLINANGIGETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDP 595
Query: 632 NSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREE 691
++PHG+RLLIEDYPYA DGLEIWA+IK WVQ+Y YY DD VK DSELQ WWKE E+
Sbjct: 596 STPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEK 655
Query: 692 GHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFM 751
GHGD KD+PWWPK+Q E+L++ C IIIW+ASALHAA+NFGQYPY G + NRPT SRR +
Sbjct: 656 GHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLL 715
Query: 752 PEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSD 811
PE+GTPEY+E+ +N +K +L+TIT++L T++ +S+IEILS H++DEVYLGQRD P WTSD
Sbjct: 716 PEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSD 775
Query: 812 EAPLQAFDEFGKKLAEVEEKIISRNHNKNLK-NRVGPVKMPYTLLVPTSEGGLTGKGIPN 870
LQAF +FG KL E+EEK++ RN++ +L+ NR+GPV++PYTLL P+SE GLT +GIPN
Sbjct: 776 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPN 835
Query: 871 SVSI 874
S+SI
Sbjct: 836 SISI 839
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/844 (58%), Positives = 632/844 (74%), Gaps = 22/844 (2%)
Query: 38 TVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIE 97
TVVLM KN L+ N + S +D + LGR V+LQLISA + GK+GK +E
Sbjct: 11 TVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKAD----AHGKGKVGKDTFLE 65
Query: 98 GWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHF 157
G L AGESAFN+ FEWD +G+PGAF I+N EF+LK+LTLE + +G + F
Sbjct: 66 GINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRF 125
Query: 158 VCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYD 217
VCNSWVY K Y + RIFF N TY+P++TP PL YRE+EL +LRG+ T E +E+DR+YD
Sbjct: 126 VCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYD 185
Query: 218 YAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSESRLSIVYSLNIYV 276
Y YNDLG+P K +K RPVLGGS+ +PYPRRGRTGR D +E + + YV
Sbjct: 186 YDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEV-----FYV 240
Query: 277 PRDERFGHLKMSDFLAFALKSIAQVIKPALES---LDSSPNEFDSFDDILKLYEGGIDLP 333
PRDE GHLK D L KS++Q+++PA ES L S+P EF SF D+ LYEGGI LP
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP 300
Query: 334 NNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPV 392
+++ I IP ++KE++RTDG +LKFP P V++ +SAW TDEEF REM+AG+NP
Sbjct: 301 RDVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357
Query: 393 VICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMT 452
VI L+EFPP S L+P +YG+Q S IT + ++ LDG T+DEA+ +LF+LD+HD M
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMP 415
Query: 453 YLRRINT-TSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVK 511
Y+R+IN S KTYA+RTILFL+ DGTLKPVAIELSLPH GD AVS+V P+++GV+
Sbjct: 416 YVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475
Query: 512 GSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDT 571
+IW LAKAYV VNDS +HQL+SHWLNTHAA+EPFVIAT+R LSVLHPIYKLL PH+R+
Sbjct: 476 STIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNN 535
Query: 572 MNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDP 631
MNINA ARQ LINA G++E T P KY++E+SSA+YK+W F +QALP DL KRGVA++DP
Sbjct: 536 MNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDP 595
Query: 632 NSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREE 691
++PHG+RLLIEDYPYA DGLEIWA+IK WVQ+Y YY DD VK DSELQ WWKE E+
Sbjct: 596 STPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEK 655
Query: 692 GHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFM 751
GHGD KD+PWWPK+Q E+L++ C IIIW+ASALHAA+ FGQYPY G + NRPT SRR +
Sbjct: 656 GHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVGFGQYPYGGLIMNRPTASRRLL 715
Query: 752 PEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSD 811
PE+GTPEY+E+ +N +K +L+TIT++L T++ +S+IEILS H++DEVYLGQRD P WTSD
Sbjct: 716 PEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSD 775
Query: 812 EAPLQAFDEFGKKLAEVEEKIISRNHNKNLK-NRVGPVKMPYTLLVPTSEGGLTGKGIPN 870
LQAF +FG KL E+EEK++ RN++ +L+ NR+GPV++PYTLL P+SE GLT +GIPN
Sbjct: 776 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPN 835
Query: 871 SVSI 874
S+SI
Sbjct: 836 SISI 839
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/844 (58%), Positives = 632/844 (74%), Gaps = 22/844 (2%)
Query: 38 TVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIE 97
TVVLM KN L+ N + S +D + LGR V+LQLISA + GK+GK +E
Sbjct: 11 TVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKAD----AHGKGKVGKDTFLE 65
Query: 98 GWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHF 157
G L AGESAFN+ FEWD +G+PGAF I+N EF+LK+LTLE + +G + F
Sbjct: 66 GINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRF 125
Query: 158 VCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYD 217
VCNSWVY K Y + RIFF N TY+P++TP PL YRE+EL +LRG+ T E +E+DR+YD
Sbjct: 126 VCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYD 185
Query: 218 YAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSESRLSIVYSLNIYV 276
Y YNDLG+P K +K RPVLGGS+ +PYPRRGRTGR D +E + + YV
Sbjct: 186 YDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEV-----FYV 240
Query: 277 PRDERFGHLKMSDFLAFALKSIAQVIKPALES---LDSSPNEFDSFDDILKLYEGGIDLP 333
PRDE GHLK D L KS++Q+++PA ES L S+P EF SF D+ LYEGGI LP
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP 300
Query: 334 NNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPV 392
+++ I IP ++KE++RTDG +LKFP P V++ +SAW TDEEF REM+AG+NP
Sbjct: 301 RDVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357
Query: 393 VICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMT 452
VI L+EFPP S L+P +YG+Q S IT + ++ LDG T+DEA+ +LF+LD+HD M
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMP 415
Query: 453 YLRRINT-TSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVK 511
Y+R+IN S KTYA+RTILFL+ DGTLKPVAIELSLPH GD AVS+V P+++GV+
Sbjct: 416 YVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475
Query: 512 GSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDT 571
+IW LAKAYV VNDS +HQL+SHWLNTHAA+EPFVIAT+R LSVLHPIYKLL PH+R+
Sbjct: 476 STIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNN 535
Query: 572 MNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDP 631
MNINA ARQ LINA G++E T P KY++E+SSA+YK+W F +QALP DL KRGVA++DP
Sbjct: 536 MNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDP 595
Query: 632 NSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREE 691
++PHG+RLLIEDYPYA DGLEIWA+IK WVQ+Y YY DD VK DSELQ WWKE E+
Sbjct: 596 STPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEK 655
Query: 692 GHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFM 751
GHGD KD+PWWPK+Q E+L++ C IIIW+ASALHAA+NFG YPY G + NRPT SRR +
Sbjct: 656 GHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGNYPYGGLIMNRPTASRRLL 715
Query: 752 PEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSD 811
PE+GTPEY+E+ +N +K +L+TIT++L T++ +S+IEILS H++DEVYLGQRD P WTSD
Sbjct: 716 PEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSD 775
Query: 812 EAPLQAFDEFGKKLAEVEEKIISRNHNKNLK-NRVGPVKMPYTLLVPTSEGGLTGKGIPN 870
LQAF +FG KL E+EEK++ RN++ +L+ NR+GPV++PYTLL P+SE GLT +GIPN
Sbjct: 776 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPN 835
Query: 871 SVSI 874
S+SI
Sbjct: 836 SISI 839
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/844 (58%), Positives = 632/844 (74%), Gaps = 22/844 (2%)
Query: 38 TVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIE 97
TVVLM KN L+ N + S +D + LGR V+LQLISA + GK+GK +E
Sbjct: 11 TVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKAD----AHGKGKVGKDTFLE 65
Query: 98 GWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHF 157
G L AGESAFN+ FEWD +G+PGAF I+N EF+LK+LTLE + +G + F
Sbjct: 66 GINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRF 125
Query: 158 VCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYD 217
VCNSWVY K Y + RIFF N TY+P++TP PL YRE+EL +LRG+ T E +E+DR+YD
Sbjct: 126 VCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYD 185
Query: 218 YAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSESRLSIVYSLNIYV 276
Y YNDLG+P K +K RPVLGGS+ +PYPRRGRTGR D +E + + YV
Sbjct: 186 YDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEV-----FYV 240
Query: 277 PRDERFGHLKMSDFLAFALKSIAQVIKPALES---LDSSPNEFDSFDDILKLYEGGIDLP 333
PRDE GHLK D L KS++Q+++PA ES L S+P EF SF D+ LYEGGI LP
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP 300
Query: 334 NNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPV 392
+++ I IP ++KE++RTDG +LKFP P V++ +SAW TDEEF REM+AG+NP
Sbjct: 301 RDVISTI---IPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357
Query: 393 VICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMT 452
VI L+EFPP S L+P +YG+Q S IT + ++ LDG T+DEA+ +LF+LD+HD M
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMP 415
Query: 453 YLRRINT-TSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVK 511
Y+R+IN S KTYA+RTILFL+ DGTLKPVAIELSLPH GD AVS+V P+++GV+
Sbjct: 416 YVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475
Query: 512 GSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDT 571
+IW LAKAYV VNDS +H L+SHWLNTHAA+EPFVIAT+R LSVLHPIYKLL PH+R+
Sbjct: 476 STIWLLAKAYVIVNDSCYHALMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNN 535
Query: 572 MNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDP 631
MNINA ARQ LINA G++E T P KY++E+SSA+YK+W F +QALP DL KRGVA++DP
Sbjct: 536 MNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDP 595
Query: 632 NSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREE 691
++PHG+RLLIEDYPYA DGLEIWA+IK WVQ+Y YY DD VK DSELQ WWKE E+
Sbjct: 596 STPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEK 655
Query: 692 GHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFM 751
GHGD KD+PWWPK+Q E+L++ C IIIW+ASALHAA+NFGQYPY G + NRPT SRR +
Sbjct: 656 GHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLL 715
Query: 752 PEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSD 811
PE+GTPEY+E+ +N +K +L+TIT++L T++ +S+IEILS H++DEVYLGQRD P WTSD
Sbjct: 716 PEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSD 775
Query: 812 EAPLQAFDEFGKKLAEVEEKIISRNHNKNLK-NRVGPVKMPYTLLVPTSEGGLTGKGIPN 870
LQAF +FG KL E+EEK++ RN++ +L+ NR+GPV++PYTLL P+SE GLT +GIPN
Sbjct: 776 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPN 835
Query: 871 SVSI 874
S+SI
Sbjct: 836 SISI 839
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/865 (54%), Positives = 614/865 (70%), Gaps = 42/865 (4%)
Query: 38 TVVLMKKNVLDFNDFNA----------------------SFLDRFHELLGRKVTLQLISA 75
TVVLM KNVLDFN + +D LGR +++QLISA
Sbjct: 14 TVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNISMQLISA 73
Query: 76 VHGEPAENGLQAGKIGKLAHIEGWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNH 135
+ + NG K+GK ++E +P L A + AF++ FEWD G+PGAF I+N
Sbjct: 74 TQTDGSGNG----KVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIPGAFYIKNFM 129
Query: 136 HSEFYLKTLTLEDVPGEGRVHFVCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYRE 195
EF+L ++ LED+P G + FVCNSWVY + Y +RIFF N TYLP+ TP PL YR+
Sbjct: 130 TDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFFVNDTYLPSATPAPLLKYRK 189
Query: 196 QELVNLRGDVTTELQEHDRVYDYAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK 255
+E LRGD T + ++ DR+YDY YNDLG+P G RP+LGG + YPYP R RTGR+
Sbjct: 190 EEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDP--RPILGGCSIYPYPLRVRTGRE 247
Query: 256 LAEDSKSESRLSIVYSLNIYVPRDERFGHLKMSDFLAFALKSIAQVIKPALES----LDS 311
+ + +YVPRDE FGHLK SDFL + +KS++ + P +S L
Sbjct: 248 RTRTDPNSEKPG-----EVYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRV 302
Query: 312 SPNEFDSFDDILKLYEGGIDLPNNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKE 370
+ +EF+SF+D+ LYEGGI LP ++L I P LKEIFRTDG+ +L+FP P V K
Sbjct: 303 TSSEFESFEDVRSLYEGGIKLPTDILSQIS---PLPALKEIFRTDGENVLQFPPPHVAKV 359
Query: 371 DESAWRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGL 430
+S TDEEF RE++AG+NP VI L+EFPP S L+P LYG+Q STIT+ +E N+ G+
Sbjct: 360 SKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQLEINMGGV 419
Query: 431 TVDEAIEKNKLFILDHHDSLMTYLRRINTTST-KTYASRTILFLKADGTLKPVAIELSLP 489
TV+EA+ +LFILD+ D+ + YL RIN+ T K YA+RTILFLK DGTLKP+AIELS P
Sbjct: 420 TVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSKP 479
Query: 490 HPDGDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIA 549
HPDGD G S V P+ +GV +IW LAKA+V VNDSG+HQL+SHWLNTHA +EPF IA
Sbjct: 480 HPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIA 539
Query: 550 TNRQLSVLHPIYKLLHPHFRDTMNINAFARQILINAGGVLEITVFPGKYAMELSSALYKS 609
TNR LSVLHPIYKLL+PH+RDT+NIN ARQ LINA G++E + PGKY++E+SS++YK+
Sbjct: 540 TNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKN 599
Query: 610 WSFPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYY 669
W F QALP DL KRG+A+EDP++PHGLRL+IEDYPYAVDGLEIW +IK WV +Y YY
Sbjct: 600 WVFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYY 659
Query: 670 KNDDMVKEDSELQSWWKELREEGHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAI 729
D V++D+ELQ+WWKE E+GHGD K++PWWPK Q E+LI SC+II+W ASALHAA+
Sbjct: 660 PTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCSIIVWTASALHAAV 719
Query: 730 NFGQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEI 789
NFGQYPY G + NRPT++RRF+P EGTPEYDE+ NP K +L+TIT + +T++ +S+IEI
Sbjct: 720 NFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNPQKAYLRTITPKFETLIDLSVIEI 779
Query: 790 LSRHSTDEVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVK 849
LSRH++DE+YLG+R+TP WT+D+ L+AF FG KL +E KI +RN + +L+NR GPV+
Sbjct: 780 LSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQ 839
Query: 850 MPYTLLVPTSEGGLTGKGIPNSVSI 874
+PYTLL +SE GLT KGIPNS+SI
Sbjct: 840 LPYTLLHRSSEEGLTFKGIPNSISI 864
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 150/507 (29%), Positives = 246/507 (48%), Gaps = 66/507 (13%)
Query: 375 WRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLD-GLTVD 433
WR D F + L G NP VI + P + E+ +E LD G T++
Sbjct: 251 WRDDVWFGSQFLNGSNPEVIRRCDKLPENFPVKNEM------------VEKLLDRGYTLE 298
Query: 434 EAIEKNKLFILDHHDSLMTYLRRINTTSTKTYASR--TILFLKADGTLKPVAIELSLPHP 491
+A+++ +FI D+ ++ + ++T K Y + + +LK + + P+AI+L
Sbjct: 299 KAMKEGLIFITDY--KILEGIPTMDTPEDKRYITTPLGLFYLKNNDDIIPIAIQLY---- 352
Query: 492 DGDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATN 551
Q G + ++TP +D W +AK ++ D+ +HQ+I+H L H +EP +++
Sbjct: 353 --QQPGENNSIWTPLKDTEWD--WIMAKLWLRCADTQYHQMITHLLRCHLMMEPTAVSSW 408
Query: 552 RQLSVLHPIYKLLHPHFRDTMNINAFARQILINAGGVLE-ITVFPGKYAMELSSALYKSW 610
R L +HP++KLL+PH + M IN R LI GG + + G + L Y+S
Sbjct: 409 RNLPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGGQVTLMQKHYRSV 468
Query: 611 SFPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYK 670
+F L +DL++RGV GLR + Y D L +W I ++VQD YY
Sbjct: 469 TFDSYDLVKDLRQRGV--------DGLR----KFYYKDDALLLWNVIHQFVQDIIQIYYN 516
Query: 671 NDDMVKEDSELQSWWKELREEGH---GDKKDEPWWPKMQNREELIDSCTIIIWVASALHA 727
+DD VK+D+E+Q W ++L E G+ D D+ +NREEL+ T++++ S HA
Sbjct: 517 DDDSVKKDNEIQDWIRDLHENGYPAGSDGTDKKVPKSFENREELVHFLTVVVFTCSCQHA 576
Query: 728 AINFGQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTITAQLQTILGISLI 787
A+NF Q G+ PN PT+ R+ P E + +SN KV + ++ + Q + +S++
Sbjct: 577 AVNFSQMATYGFHPNSPTLMRQPPPTE------KGKSN-HKVIMASLANKHQAVTMVSVV 629
Query: 788 EILSRHSTDEVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGP 847
L+ E +LG D A A +F LA + ++I RN
Sbjct: 630 NALTTIYPTEKFLGDY-ADNLFGDAAAHAAMAKFKSNLANITKQITERNQG--------- 679
Query: 848 VKMPYTLLVPTSEGGLTGKGIPNSVSI 874
+ PYT L+P +PNS++I
Sbjct: 680 MVSPYTWLIPGH--------VPNSIAI 698
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 145/522 (27%), Positives = 240/522 (45%), Gaps = 76/522 (14%)
Query: 375 WRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLD-GLTVD 433
W D F + L G NPV++ P +T + +LD G +D
Sbjct: 599 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 646
Query: 434 EAIEKNKLFILDHHD-----------------SLMTYLRRINTTSTKTYASRTILFLKAD 476
E I+ ++I+D + +L+ A + ++
Sbjct: 647 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 706
Query: 477 GTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHW 536
G L P+AI+++ + G + ++TP E+ W +AK ++ V +S HQL +H
Sbjct: 707 GHLMPIAIQIN------QEPGPENPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHL 758
Query: 537 LNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINAFARQILINAGGVLEITV-FP 595
L TH E F ++T R L+ HPI+KLL PH + I+ R+ LI +GG+++ ++
Sbjct: 759 LRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLG 818
Query: 596 GKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWA 655
G + +K + + LP LKKRG V+DP+ G + Y DGL +W
Sbjct: 819 GGGHVTFMEKCFKEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLALWE 869
Query: 656 SIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREEG---HGDKKDEPWWPKMQNREELI 712
+I+ ++ + +YKNDD VK D+E+QSW ++ + G + +D ++RE+L
Sbjct: 870 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESREQLK 929
Query: 713 DSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLK 772
+ T +++ S HAA+NF Q + G+ PN P I R P++ L+S L
Sbjct: 930 EVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEA--TLQS-----ILS 982
Query: 773 TITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKI 832
T+ ++ Q I+ + IL++ S DE YLG W +A L A + F KL ++ +KI
Sbjct: 983 TLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKDA-LDAINRFQDKLEDISKKI 1041
Query: 833 ISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 874
RN N +++PY L+P IPN +I
Sbjct: 1042 KQRNEN---------LEVPYIYLLPER--------IPNGTAI 1066
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/522 (27%), Positives = 241/522 (46%), Gaps = 76/522 (14%)
Query: 375 WRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLD-GLTVD 433
W D F + L G NPV++ P +T + +LD G +D
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 276
Query: 434 EAIEKNKLFILDHHD-----------------SLMTYLRRINTTSTKTYASRTILFLKAD 476
E I+ ++I+D + +L+ A + ++
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 477 GTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHW 536
G L P+AI+++ + G + ++TP E+ W +AK ++ V +S HQL +H
Sbjct: 337 GHLMPIAIQIN------QEPGPENPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHL 388
Query: 537 LNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINAFARQILINAGGVLEITV-FP 595
L TH E F ++T R L+ HPI+KLL PH + I+ R+ LI +GG+++ ++
Sbjct: 389 LRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLG 448
Query: 596 GKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWA 655
G + +K + + LP LKKRG V+DP+ G + Y DGL +W
Sbjct: 449 GGGHVTFMEKCFKEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLALWE 499
Query: 656 SIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREEG---HGDKKDEPWWPKMQNREELI 712
+I+ ++ + +YKNDD VK D+E+QSW ++ + G + +D ++RE+L
Sbjct: 500 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESREQLK 559
Query: 713 DSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLK 772
+ T +++ S HAA+NF Q + G+ PN P I R P++ L+S L
Sbjct: 560 EVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEA--TLQS-----ILS 612
Query: 773 TITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKI 832
T+ ++ Q I+ + IL++ S DE YLG W D+ L A + F KL ++ +KI
Sbjct: 613 TLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLEDISKKI 671
Query: 833 ISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 874
RN N +++PY L+P + IPN +I
Sbjct: 672 KQRNEN---------LEVPYIYLLP--------ERIPNGTAI 696
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 143/522 (27%), Positives = 241/522 (46%), Gaps = 76/522 (14%)
Query: 375 WRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLD-GLTVD 433
W D F + L G NPV++ P +T + +LD G +D
Sbjct: 232 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 279
Query: 434 EAIEKNKLFILDHHD-----------------SLMTYLRRINTTSTKTYASRTILFLKAD 476
E I+ ++I+D + +L+ A + ++
Sbjct: 280 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 339
Query: 477 GTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHW 536
G L P+AI+++ + G + ++TP E+ W +AK ++ V +S HQL +H
Sbjct: 340 GHLMPIAIQIN------QEPGPENPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHL 391
Query: 537 LNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINAFARQILINAGGVLEITV-FP 595
L TH E F ++T R L+ HP++KLL PH + I+ R+ LI +GG+++ ++
Sbjct: 392 LRTHLTTESFALSTWRNLASAHPVFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLG 451
Query: 596 GKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWA 655
G + +K + + LP LKKRG V+DP+ G + Y DGL +W
Sbjct: 452 GGGHVTFMEKCFKEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLALWE 502
Query: 656 SIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREEG---HGDKKDEPWWPKMQNREELI 712
+I+ ++ + +YKNDD VK D+E+QSW ++ + G + +D ++RE+L
Sbjct: 503 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESREQLK 562
Query: 713 DSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLK 772
+ T +++ S HAA+NF Q + G+ PN P + R P++ L+S L
Sbjct: 563 EVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAVLRHPPPKKKGEA--TLQS-----ILS 615
Query: 773 TITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKI 832
T+ ++ Q I+ + IL++ S DE YLG W D+ L A + F KL ++ +KI
Sbjct: 616 TLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLEDISKKI 674
Query: 833 ISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 874
RN N +++PY L+P + IPN +I
Sbjct: 675 KQRNEN---------LEVPYIYLLP--------ERIPNGTAI 699
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 189 bits (479), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 240/522 (45%), Gaps = 76/522 (14%)
Query: 375 WRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLD-GLTVD 433
W D F + L G NPV++ P +T + +LD G +D
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 276
Query: 434 EAIEKNKLFILDHHD-----------------SLMTYLRRINTTSTKTYASRTILFLKAD 476
E I+ ++I+D + +L+ A + ++
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 477 GTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHW 536
G L P+AI+++ + G + ++TP E+ W +AK ++ V +S HQL +H
Sbjct: 337 GHLMPIAIQIN------QEPGPENPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHL 388
Query: 537 LNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINAFARQILINAGGVLEITV-FP 595
L TH E F ++T R L+ HPI+KLL PH + I+ R+ L +GG+++ ++
Sbjct: 389 LRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELAGSGGIVDQSLSLG 448
Query: 596 GKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWA 655
G + +K + + LP LKKRG V+DP+ G + Y DGL +W
Sbjct: 449 GGGHVTFMEKCFKEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLALWE 499
Query: 656 SIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREEG---HGDKKDEPWWPKMQNREELI 712
+I+ ++ + +YKNDD VK D+E+QSW ++ + G + +D ++RE+L
Sbjct: 500 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESREQLK 559
Query: 713 DSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLK 772
+ T +++ S HAA+NF Q + G+ PN P I R P++ L+S L
Sbjct: 560 EVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEA--TLQS-----ILS 612
Query: 773 TITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKI 832
T+ ++ Q I+ + IL++ S DE YLG W D+ L A + F KL ++ +KI
Sbjct: 613 TLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLEDISKKI 671
Query: 833 ISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 874
RN N +++PY L+P + IPN +I
Sbjct: 672 KQRNEN---------LEVPYIYLLP--------ERIPNGTAI 696
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 240/522 (45%), Gaps = 76/522 (14%)
Query: 375 WRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLD-GLTVD 433
W D F + L G NPV++ P +T + +LD G +D
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 276
Query: 434 EAIEKNKLFILDHHD-----------------SLMTYLRRINTTSTKTYASRTILFLKAD 476
E I+ ++I+D + +L+ A + ++
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 477 GTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHW 536
G L P+AI+++ + G + ++TP E+ W +AK ++ V +S HQL +H
Sbjct: 337 GHLMPIAIQIN------QEPGPENPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHL 388
Query: 537 LNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINAFARQILINAGGVLEITV-FP 595
L TH E F ++T R L+ HPI+KLL PH + I+ R+ L +GG+++ ++
Sbjct: 389 LRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELWGSGGIVDQSLSLG 448
Query: 596 GKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWA 655
G + +K + + LP LKKRG V+DP+ G + Y DGL +W
Sbjct: 449 GGGHVTFMEKCFKEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLALWE 499
Query: 656 SIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREEG---HGDKKDEPWWPKMQNREELI 712
+I+ ++ + +YKNDD VK D+E+QSW ++ + G + +D ++RE+L
Sbjct: 500 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESREQLK 559
Query: 713 DSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLK 772
+ T +++ S HAA+NF Q + G+ PN P I R P++ L+S L
Sbjct: 560 EVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEA--TLQS-----ILS 612
Query: 773 TITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKI 832
T+ ++ Q I+ + IL++ S DE YLG W D+ L A + F KL ++ +KI
Sbjct: 613 TLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLEDISKKI 671
Query: 833 ISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 874
RN N +++PY L+P + IPN +I
Sbjct: 672 KQRNEN---------LEVPYIYLLP--------ERIPNGTAI 696
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 164/615 (26%), Positives = 273/615 (44%), Gaps = 100/615 (16%)
Query: 266 LSIVYSLNIYVPRDERFGHLKMSDFLAFALKSIAQV-IKPALESLDSSPNEFDSFDDILK 324
LSI + +PRD +F K DF+ K++ + I + SS N+F F+ I
Sbjct: 171 LSIDAKCHKDLPRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSSWNDFADFEKIF- 229
Query: 325 LYEGGIDLPNNLLDDIRKHIPFEMLKEIFRTDGDLLKFPMPQVIKEDESAWRTDEEFTRE 384
+ + N + + + H W+ D F +
Sbjct: 230 -----VKISNTISERVMNH-------------------------------WQEDLMFGYQ 253
Query: 385 MLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLD-GLTVDEAIEKNKLFI 443
L G NPV+I E P ++ +T +E +L+ L++++ +++ +FI
Sbjct: 254 FLNGANPVLIRRCTELP------------EKLPVTTEMVECSLERQLSLEQEVQQGNIFI 301
Query: 444 LDHHDSLMTYLRRINTT-STKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKV 502
+D L+ + T T + + I L + K V I + L GD+ + +
Sbjct: 302 VDF--ELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDE----NPI 355
Query: 503 YTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYK 562
+ PS+ W LAK +V +D HQ I+H L TH E F IA RQL +HPI+K
Sbjct: 356 FLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFK 412
Query: 563 LLHPHFRDTMNINAFARQILINAGGVLE-ITVFPGKYAMELSSALYKSWSFPEQALPEDL 621
LL H R T+ IN AR+ LI G+ + G +++ K ++ PE +
Sbjct: 413 LLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLCFPEAI 472
Query: 622 KKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSEL 681
K RG+ ++ I Y Y DGL +W +I+ + + YY+ D +V+ED EL
Sbjct: 473 KARGMESKED---------IPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPEL 523
Query: 682 QSWWKELREEGHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLP 741
Q + ++ G +K + +++RE+L + T++I+ ASA HAA+NFGQY +A ++P
Sbjct: 524 QDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWASWIP 583
Query: 742 NRPTISRRFMP-EEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYL 800
N P R P +G +++ + T+ + ++ + + LS+ +E++L
Sbjct: 584 NAPPTMRAPPPTAKGVVTIEQI--------VDTLPDRGRSCWHLGAVWALSQFQENELFL 635
Query: 801 GQRDTPEWTSDEAPL-QAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTS 859
G PE E P+ +A F K L + I RN N +++PY L P
Sbjct: 636 GM--YPEEHFIEKPVKEAMARFRKNLEAIVSVIAERNEN---------LQLPYYYLAPDR 684
Query: 860 EGGLTGKGIPNSVSI 874
IPNSV+I
Sbjct: 685 --------IPNSVAI 691
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 164/615 (26%), Positives = 273/615 (44%), Gaps = 100/615 (16%)
Query: 266 LSIVYSLNIYVPRDERFGHLKMSDFLAFALKSIAQV-IKPALESLDSSPNEFDSFDDILK 324
LSI + +PRD +F K DF+ K++ + I + SS N+F F+ I
Sbjct: 171 LSIDAKCHKDLPRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSSWNDFADFEKIF- 229
Query: 325 LYEGGIDLPNNLLDDIRKHIPFEMLKEIFRTDGDLLKFPMPQVIKEDESAWRTDEEFTRE 384
+ + N + + + H W+ D F +
Sbjct: 230 -----VKISNTISERVMNH-------------------------------WQEDLMFGYQ 253
Query: 385 MLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLD-GLTVDEAIEKNKLFI 443
L G NPV+I E P ++ +T +E +L+ L++++ +++ +FI
Sbjct: 254 FLNGANPVLIRRCTELP------------EKLPVTTEMVECSLERQLSLEQEVQQGNIFI 301
Query: 444 LDHHDSLMTYLRRINTT-STKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKV 502
+D L+ + T T + + I L + K V I + L GD+ + +
Sbjct: 302 VDF--ELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDE----NPI 355
Query: 503 YTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYK 562
+ PS+ W LAK +V +D HQ I+H L TH E F IA RQL +HPI+K
Sbjct: 356 FLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFK 412
Query: 563 LLHPHFRDTMNINAFARQILINAGGVLE-ITVFPGKYAMELSSALYKSWSFPEQALPEDL 621
LL H R T+ IN AR+ LI G+ + G +++ K ++ PE +
Sbjct: 413 LLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLCFPEAI 472
Query: 622 KKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSEL 681
K RG+ ++ I Y Y DGL +W +I+ + + YY+ D +V+ED EL
Sbjct: 473 KARGMESKED---------IPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPEL 523
Query: 682 QSWWKELREEGHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLP 741
Q + ++ G +K + +++RE+L + T++I+ ASA HAA+NFGQY +A ++P
Sbjct: 524 QDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWASWIP 583
Query: 742 NRPTISRRFMP-EEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYL 800
N P R P +G +++ + T+ + ++ + + LS+ +E++L
Sbjct: 584 NAPPTMRAPPPTAKGVVTIEQI--------VDTLPDRGRSCWHLGAVWALSQFQENELFL 635
Query: 801 GQRDTPEWTSDEAPL-QAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTS 859
G PE E P+ +A F K L + I RN N +++PY L P
Sbjct: 636 GM--YPEEHFIEKPVKEAMARFRKNLEAIVSVIAERNEN---------LQLPYYYLSPDR 684
Query: 860 EGGLTGKGIPNSVSI 874
IPNSV+I
Sbjct: 685 --------IPNSVAI 691
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 164/615 (26%), Positives = 273/615 (44%), Gaps = 100/615 (16%)
Query: 266 LSIVYSLNIYVPRDERFGHLKMSDFLAFALKSIAQV-IKPALESLDSSPNEFDSFDDILK 324
LSI + +PRD +F K DF+ K++ + I + SS N+F F+ I
Sbjct: 171 LSIDAKCHKDLPRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSSWNDFADFEKIF- 229
Query: 325 LYEGGIDLPNNLLDDIRKHIPFEMLKEIFRTDGDLLKFPMPQVIKEDESAWRTDEEFTRE 384
+ + N + + + H W+ D F +
Sbjct: 230 -----VKISNTISERVMNH-------------------------------WQEDLMFGYQ 253
Query: 385 MLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLD-GLTVDEAIEKNKLFI 443
L G NPV+I E P ++ +T +E +L+ L++++ +++ +FI
Sbjct: 254 FLNGANPVLIRRCTELP------------EKLPVTTEMVECSLERQLSLEQEVQQGNIFI 301
Query: 444 LDHHDSLMTYLRRINTT-STKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKV 502
+D L+ + T T + + I L + K V I + L GD+ + +
Sbjct: 302 VDF--ELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDE----NPI 355
Query: 503 YTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYK 562
+ PS+ W LAK +V +D HQ I+H L TH E F IA RQL +HPI+K
Sbjct: 356 FLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFK 412
Query: 563 LLHPHFRDTMNINAFARQILINAGGVLE-ITVFPGKYAMELSSALYKSWSFPEQALPEDL 621
LL H R T+ IN AR+ LI G+ + G +++ K ++ PE +
Sbjct: 413 LLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLCFPEAI 472
Query: 622 KKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSEL 681
K RG+ ++ I Y Y DGL +W +I+ + + YY+ D +V+ED EL
Sbjct: 473 KARGMESKED---------IPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPEL 523
Query: 682 QSWWKELREEGHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLP 741
Q + ++ G +K + +++RE+L + T++I+ ASA HAA+NFGQY +A ++P
Sbjct: 524 QDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWASWIP 583
Query: 742 NRPTISRRFMP-EEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYL 800
N P R P +G +++ + T+ + ++ + + LS+ +E++L
Sbjct: 584 NAPPTMRAPPPTAKGVVTIEQI--------VDTLPDRGRSCWHLGAVWALSQFQENELFL 635
Query: 801 GQRDTPEWTSDEAPL-QAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTS 859
G PE E P+ +A F K L + I RN N +++PY L P
Sbjct: 636 GM--YPEEHFIEKPVKEAMARFRKNLEAIVSVIAERNEN---------LQLPYYYLDPDR 684
Query: 860 EGGLTGKGIPNSVSI 874
IPNSV+I
Sbjct: 685 --------IPNSVAI 691
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 170/610 (27%), Positives = 263/610 (43%), Gaps = 118/610 (19%)
Query: 276 VPRDERFGHLKMSDFLAFALKSIAQV-IKPALESLDSSPNEFDSFDDILKLYEGGIDLPN 334
+P DERF K DF A K +A + +K +L L S N DSF+ I + G L
Sbjct: 71 LPVDERFLEDKRIDFEASLAKGLADLAVKDSLNVL-MSWNSLDSFNRIF--WSGQSKLAE 127
Query: 335 NLLDDIRKHIPFEMLKEIFRTDGDLLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPVVI 394
+ D +W+ D F + L G NP+++
Sbjct: 128 RVRD-----------------------------------SWKEDALFGYQFLNGTNPMLL 152
Query: 395 CCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMTYL 454
E P K P + Q +E L G T+ EA SL+ +
Sbjct: 153 RHSVELPARLKFPPGMEE------LQAQLEKELQGGTLFEA-----------DFSLLDGI 195
Query: 455 RRINTTSTKTYASRTILFLK--ADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVKG 512
+ S++ Y + ++ LK DG L P+ I+L LP + + ++ P++ +
Sbjct: 196 KANVILSSQQYLAVPLVMLKLQPDGKLLPMVIQLQLPR----EGSPLPPLFLPTDPPM-- 249
Query: 513 SIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDTM 572
+W LAK +V +D H+L SH L H E +AT R L +HPI+KLL PHFR TM
Sbjct: 250 -VWLLAKCWVRSSDFQLHELHSHLLRGHLMAEVIAVATMRCLPSIHPIFKLLIPHFRYTM 308
Query: 573 NINAFARQILINAGGVLEITVFPGKYA----MELSSALYKSWSFPEQALPEDLKKRGVAV 628
IN AR L++ G+ + V G + ++AL SF P+DL RG+
Sbjct: 309 EINVRARNGLVSDLGIFDQVVSTGGGGHVELLRRAAALLTYSSF---CPPDDLADRGL-- 363
Query: 629 EDPNSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKEL 688
L +E YA D L +W I ++V+ +YK D+ VKED ELQ+W +E
Sbjct: 364 ----------LGVESSFYAQDALRLWEVISRYVEGIVSLHYKTDESVKEDFELQAWCREF 413
Query: 689 REEGHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISR 748
E G +D + +Q++E+L T+ I+ + H++ + GQ + ++PN P R
Sbjct: 414 TEIGLLGAQDRGFPVSLQSKEQLCHFVTMCIFTCTGQHSSNHLGQLDWYTWVPNAPCTMR 473
Query: 749 RFMPEEGTPEYDELESNPDKVFLKTITAQL----QTILGISLIEILSRHSTDEVYLGQRD 804
+P T + L+T+ A L Q L +S+ L R V LGQ +
Sbjct: 474 --LPPPTTKD----------ATLETVMATLPNFHQASLQMSITWQLGRCQPTMVALGQHE 521
Query: 805 TPEWTSDEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLT 864
E+ S P +F ++LA +++ I RN + +PY L P+
Sbjct: 522 E-EYFSGPGPKAVLTKFREELAALDKDIEVRN---------AKLALPYEYLRPSR----- 566
Query: 865 GKGIPNSVSI 874
+ NSV+I
Sbjct: 567 ---VENSVAI 573
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
pdb|3D3L|B Chain B, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
Length = 541
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 215/472 (45%), Gaps = 55/472 (11%)
Query: 374 AWRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVD 433
W+ DE F+ + L G NP+++ P L P R+ +E L ++
Sbjct: 67 CWQDDELFSYQFLNGANPMLLRRSTSLPSRLVL-PSGMEELRA-----QLEKELQNGSLF 120
Query: 434 EAIEKNKLFILDHHDSLMTYLRRINTTSTKTYASRTILFLKAD--GTLKPVAIELSLPHP 491
EA FIL D + + R K Y + ++ LK + G L+P+ I++
Sbjct: 121 EAD-----FIL--LDGIPANVIR----GEKQYLAAPLVMLKMEPNGKLQPMVIQIQ---- 165
Query: 492 DGDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATN 551
+ ++ PS+ + W LAK++V +D H++ H LNTH E +AT
Sbjct: 166 PPNPSSPTPTLFLPSDPPLA---WLLAKSWVRNSDFQLHEIQYHLLNTHLVAEVIAVATM 222
Query: 552 RQLSVLHPIYKLLHPHFRDTMNINAFARQILINAGGVLEITVFPGKYA-MELSSALYKSW 610
R L LHPI+K L PH R TM IN AR LI+ GG+ + V G ++L
Sbjct: 223 RCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTGGGGHVQLLRRAAAQL 282
Query: 611 SFPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYK 670
++ P+DL RG+ L + YA D L +W I ++V+ + +Y+
Sbjct: 283 TYCSLCPPDDLADRGL------------LGLPGALYAHDALRLWEIIARYVEGIVHLFYQ 330
Query: 671 NDDMVKEDSELQSWWKELREEGHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAIN 730
DD+VK D ELQ+W +E+ E G +D + Q++ +L T+ ++ +A HAAIN
Sbjct: 331 RDDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAIN 390
Query: 731 FGQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTITAQL----QTILGISL 786
GQ + ++PN P R MP T E V + T+ L Q L +++
Sbjct: 391 QGQLDWYAWVPNAPCTMR--MPPPTTKE---------DVTMATVMGSLPDVRQACLQMAI 439
Query: 787 IEILSRHSTDEVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKIISRNHN 838
LSR D V LG ++ S P ++F L ++E++I +RN
Sbjct: 440 SWHLSRRQPDMVPLGHHKE-KYFSGPKPKAVLNQFRTDLEKLEKEITARNEQ 490
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 230/507 (45%), Gaps = 71/507 (14%)
Query: 374 AWRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVD 433
+W+ D F + L G NP+++ + P P + Q +E L T+
Sbjct: 221 SWQEDSLFGYQFLNGANPMLLRRSVQLPARLVFPPGMEE------LQAQLEKELKAGTLF 274
Query: 434 EAIEKNKLFILDH-HDSLMTYLRRINTTSTKTYASRTILFLKADGTLKPVAIELSLPHPD 492
EA +LD+ +++ Y ++ A +L L+ DG L P+ I+L LP
Sbjct: 275 EA----DFALLDNIKANVILYCQQY------LAAPLVMLKLQPDGKLMPMVIQLHLPKIG 324
Query: 493 GDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNR 552
+ ++ P++ + +W LAK +V +D H+L SH L H E F +AT R
Sbjct: 325 S----SPPPLFLPTDPPM---VWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMR 377
Query: 553 QLSVLHPIYKLLHPHFRDTMNINAFARQILINAGGVL-EITVFPGKYAMELSSALYKSWS 611
L +HP++KL+ PH R T+ IN AR L++ G+ +I G ++L +
Sbjct: 378 CLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLT 437
Query: 612 FPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKN 671
+ P+DL RG+ L +E YA D L +W I ++VQ YYK
Sbjct: 438 YRSFCPPDDLADRGL------------LGVESSFYAQDALRLWEIISRYVQGIMGLYYKT 485
Query: 672 DDMVKEDSELQSWWKELREEGHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINF 731
D+ V++D ELQSW +E+ E G + + + +Q+ + T+ I+ + H++I+
Sbjct: 486 DEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIHL 545
Query: 732 GQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTITAQL----QTILGISLI 787
GQ + ++PN P R +P T + L+T+ A L Q+ L +S++
Sbjct: 546 GQLDWFTWVPNAPCTMR--LPPPTTKDAT----------LETVMATLPNLKQSSLQMSIV 593
Query: 788 EILSRHSTDEVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGP 847
L R V LGQ E+ S P ++F ++LA ++++I RN
Sbjct: 594 WQLGRDQPIMVPLGQHQE-EYFSGPEPRAVLEKFREELAIMDKEIEVRNEK--------- 643
Query: 848 VKMPYTLLVPTSEGGLTGKGIPNSVSI 874
+ +PY L P+ + NSV+I
Sbjct: 644 LDIPYEYLRPSI--------VENSVAI 662
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 230/507 (45%), Gaps = 71/507 (14%)
Query: 374 AWRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVD 433
+W+ D F + L G NP+++ + P P + Q +E L T+
Sbjct: 221 SWQEDSLFGYQFLNGANPMLLRRSVQLPARLVFPPGM------EELQAQLEKELKAGTLF 274
Query: 434 EAIEKNKLFILDH-HDSLMTYLRRINTTSTKTYASRTILFLKADGTLKPVAIELSLPHPD 492
EA +LD+ +++ Y ++ A +L L+ DG L P+ I+L LP
Sbjct: 275 EA----DFALLDNIKANVILYCQQY------LAAPLVMLKLQPDGKLMPMVIQLHLPKIG 324
Query: 493 GDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNR 552
+ ++ P++ + +W LAK +V +D H+L SH L H E F +AT R
Sbjct: 325 S----SPPPLFLPTDPPM---VWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMR 377
Query: 553 QLSVLHPIYKLLHPHFRDTMNINAFARQILINAGGVL-EITVFPGKYAMELSSALYKSWS 611
L +HP++KL+ PH R T+ IN AR L++ G+ +I G ++L +
Sbjct: 378 CLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLT 437
Query: 612 FPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKN 671
+ P+DL RG+ L +E YA D L +W I ++VQ YYK
Sbjct: 438 YRSFCPPDDLADRGL------------LGVESSFYAQDALRLWEIISRYVQGIMGLYYKT 485
Query: 672 DDMVKEDSELQSWWKELREEGHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINF 731
D+ V++D ELQSW +E+ E G + + + +Q+ + T+ I+ + H++I+
Sbjct: 486 DEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIHL 545
Query: 732 GQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTITAQL----QTILGISLI 787
GQ + ++PN P R +P T + L+T+ A L Q+ L +S++
Sbjct: 546 GQLDWFTWVPNAPCTMR--LPPPTTKD----------ATLETVMATLPNLHQSSLQMSIV 593
Query: 788 EILSRHSTDEVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGP 847
L R V LGQ E+ S P ++F ++LA ++++I RN
Sbjct: 594 WQLGRDQPIMVPLGQHQE-EYFSGPEPRAVLEKFREELAIMDKEIEVRNEK--------- 643
Query: 848 VKMPYTLLVPTSEGGLTGKGIPNSVSI 874
+ +PY L P+ + NSV+I
Sbjct: 644 LDIPYEYLRPSI--------VENSVAI 662
>pdb|2D5W|A Chain A, The Crystal Structure Of Oligopeptide Binding Protein From
Thermus Thermophilus Hb8 Complexed With Pentapeptide
pdb|2D5W|B Chain B, The Crystal Structure Of Oligopeptide Binding Protein From
Thermus Thermophilus Hb8 Complexed With Pentapeptide
Length = 603
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 20/167 (11%)
Query: 522 VAVNDSGHHQLISHWLNTHAAIEPFVIATNRQL-SVLHPIYKLLHPHFR----DTMNINA 576
+ +ND Q I H LN ++ F + + P+ L +P+ + D A
Sbjct: 320 LGLNDKRTRQAILHALNREGLVKAFFDGLQPVAHTWIAPVNPLFNPNVKKYEFDLKKAEA 379
Query: 577 FARQILINAG--GVLEITV------FPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAV 628
++ G G+L+ TV F +Y + + + +Q EDLKK G+AV
Sbjct: 380 LLAEMGWRKGPDGILQRTVNGRTVRFEIEYVTTAGNVVRER---TQQFFAEDLKKIGIAV 436
Query: 629 EDPNSPHGLRLLIEDYPYAVD----GLEIWASIKKWVQDYCYFYYKN 671
+ N+P + E A + G+ +A + +D F YKN
Sbjct: 437 KINNAPSAVVFADEFIQRASECKWTGMFEFAWVSNLQEDGSLFQYKN 483
>pdb|1I3Q|I Chain I, Rna Polymerase Ii Crystal Form I At 3.1 A Resolution
pdb|1I50|I Chain I, Rna Polymerase Ii Crystal Form Ii At 2.8 A Resolution
pdb|1I6H|I Chain I, Rna Polymerase Ii Elongation Complex
pdb|1K83|I Chain I, Crystal Structure Of Yeast Rna Polymerase Ii Complexed
With The Inhibitor Alpha Amanitin
pdb|1NIK|I Chain I, Wild Type Rna Polymerase Ii
pdb|1NT9|I Chain I, Complete 12-Subunit Rna Polymerase Ii
pdb|1PQV|I Chain I, Rna Polymerase Ii-Tfiis Complex
pdb|1R5U|I Chain I, Rna Polymerase Ii Tfiib Complex
pdb|1SFO|I Chain I, Rna Polymerase Ii Strand Separated Elongation Complex
pdb|1R9S|I Chain I, Rna Polymerase Ii Strand Separated Elongation Complex,
Matched Nucleotide
pdb|1R9T|I Chain I, Rna Polymerase Ii Strand Separated Elongation Complex,
Mismatched Nucleotide
pdb|1TWA|I Chain I, Rna Polymerase Ii Complexed With Atp
pdb|1TWC|I Chain I, Rna Polymerase Ii Complexed With Gtp
pdb|1TWF|I Chain I, Rna Polymerase Ii Complexed With Utp At 2.3 A Resolution
pdb|1TWG|I Chain I, Rna Polymerase Ii Complexed With Ctp
pdb|1TWH|I Chain I, Rna Polymerase Ii Complexed With 2'datp
pdb|1WCM|I Chain I, Complete 12-Subunit Rna Polymerase Ii At 3.8 Ang
pdb|1Y1W|I Chain I, Complete Rna Polymerase Ii Elongation Complex
pdb|1Y77|I Chain I, Complete Rna Polymerase Ii Elongation Complex With
Substrate Analogue Gmpcpp
pdb|1Y1V|I Chain I, Refined Rna Polymerase Ii-tfiis Complex
pdb|1Y1Y|I Chain I, Rna Polymerase Ii-Tfiis-DnaRNA COMPLEX
pdb|2B63|I Chain I, Complete Rna Polymerase Ii-Rna Inhibitor Complex
pdb|2B8K|I Chain I, 12-Subunit Rna Polymerase Ii
pdb|2E2H|I Chain I, Rna Polymerase Ii Elongation Complex At 5 Mm Mg2+ With Gtp
pdb|2E2I|I Chain I, Rna Polymerase Ii Elongation Complex In 5 Mm Mg+2 With 2'-
Dgtp
pdb|2E2J|I Chain I, Rna Polymerase Ii Elongation Complex In 5 Mm Mg+2 With
Gmpcpp
pdb|2NVQ|I Chain I, Rna Polymerase Ii Elongation Complex In 150 Mm Mg+2 With
2'dutp
pdb|2NVT|I Chain I, Rna Polymerase Ii Elongation Complex In 150 Mm Mg+2 With
Gmpcpp
pdb|2NVX|I Chain I, Rna Polymerase Ii Elongation Complex In 5 Mm Mg+2 With 2'-
Dutp
pdb|2NVY|I Chain I, Rna Polymerase Ii Form Ii In 150 Mm Mn+2
pdb|2NVZ|I Chain I, Rna Polymerase Ii Elongation Complex With Utp, Updated
112006
pdb|2JA5|I Chain I, Cpd Lesion Containing Rna Polymerase Ii Elongation Complex
A
pdb|2JA6|I Chain I, Cpd Lesion Containing Rna Polymerase Ii Elongation Complex
B
pdb|2JA7|I Chain I, Cpd Lesion Containing Rna Polymerase Ii Elongation Complex
C
pdb|2JA7|U Chain U, Cpd Lesion Containing Rna Polymerase Ii Elongation Complex
C
pdb|2JA8|I Chain I, Cpd Lesion Containing Rna Polymerase Ii Elongation Complex
D
pdb|2YU9|I Chain I, Rna Polymerase Ii Elongation Complex In 150 Mm Mg+2 With
Utp
pdb|2R7Z|I Chain I, Cisplatin Lesion Containing Rna Polymerase Ii Elongation
Complex
pdb|2R92|I Chain I, Elongation Complex Of Rna Polymerase Ii With Artificial
Rdrp Scaffold
pdb|2R93|I Chain I, Elongation Complex Of Rna Polymerase Ii With A Hepatitis
Delta Virus-Derived Rna Stem Loop
pdb|2VUM|I Chain I, Alpha-Amanitin Inhibited Complete Rna Polymerase Ii
Elongation Complex
pdb|3CQZ|I Chain I, Crystal Structure Of 10 Subunit Rna Polymerase Ii In
Complex With The Inhibitor Alpha-Amanitin
pdb|3FKI|I Chain I, 12-Subunit Rna Polymerase Ii Refined With Zn-Sad Data
pdb|3GTG|I Chain I, Backtracked Rna Polymerase Ii Complex With 12mer Rna
pdb|3GTJ|I Chain I, Backtracked Rna Polymerase Ii Complex With 13mer Rna
pdb|3GTK|I Chain I, Backtracked Rna Polymerase Ii Complex With 18mer Rna
pdb|3GTL|I Chain I, Backtracked Rna Polymerase Ii Complex With 13mer With G<>u
Mismatch
pdb|3GTM|I Chain I, Co-Complex Of Backtracked Rna Polymerase Ii With Tfiis
pdb|3GTO|I Chain I, Backtracked Rna Polymerase Ii Complex With 15mer Rna
pdb|3GTP|I Chain I, Backtracked Rna Polymerase Ii Complex With 24mer Rna
pdb|3GTQ|I Chain I, Backtracked Rna Polymerase Ii Complex Induced By Damage
pdb|3H3V|J Chain J, Yeast Rnap Ii Containing Poly(A)-Signal Sequence In The
Active Site
pdb|3HOU|I Chain I, Complete Rna Polymerase Ii Elongation Complex I With A T-U
Mismatch
pdb|3HOU|U Chain U, Complete Rna Polymerase Ii Elongation Complex I With A T-U
Mismatch
pdb|3HOV|I Chain I, Complete Rna Polymerase Ii Elongation Complex Ii
pdb|3HOW|I Chain I, Complete Rna Polymerase Ii Elongation Complex Iii With A
T-U Mismatch And A Frayed Rna 3'-Uridine
pdb|3HOX|I Chain I, Complete Rna Polymerase Ii Elongation Complex V
pdb|3HOY|I Chain I, Complete Rna Polymerase Ii Elongation Complex Vi
pdb|3HOZ|I Chain I, Complete Rna Polymerase Ii Elongation Complex Iv With A
T-U Mismatch And A Frayed Rna 3'-Guanine
pdb|3I4M|I Chain I, 8-oxoguanine Containing Rna Polymerase Ii Elongation
Complex D
pdb|3I4N|I Chain I, 8-oxoguanine Containing Rna Polymerase Ii Elongation
Complex E
pdb|3K1F|I Chain I, Crystal Structure Of Rna Polymerase Ii In Complex With
Tfiib
pdb|3K7A|I Chain I, Crystal Structure Of An Rna Polymerase Ii-Tfiib Complex
pdb|3M3Y|I Chain I, Rna Polymerase Ii Elongation Complex C
pdb|3M4O|I Chain I, Rna Polymerase Ii Elongation Complex B
pdb|3PO2|I Chain I, Arrested Rna Polymerase Ii Elongation Complex
pdb|3PO3|I Chain I, Arrested Rna Polymerase Ii Reactivation Intermediate
pdb|3RZD|I Chain I, Rna Polymerase Ii Initiation Complex With A 5-Nt Rna
pdb|3RZO|I Chain I, Rna Polymerase Ii Initiation Complex With A 4-Nt Rna
pdb|3S14|I Chain I, Rna Polymerase Ii Initiation Complex With A 6-Nt Rna
pdb|3S15|I Chain I, Rna Polymerase Ii Initiation Complex With A 7-Nt Rna
pdb|3S16|I Chain I, Rna Polymerase Ii Initiation Complex With An 8-Nt Rna
pdb|3S17|I Chain I, Rna Polymerase Ii Initiation Complex With A 9-Nt Rna
pdb|3S1M|I Chain I, Rna Polymerase Ii Initiation Complex With A 5-Nt Rna
(Variant 1)
pdb|3S1N|I Chain I, Rna Polymerase Ii Initiation Complex With A 5-Nt Rna
(Variant 2)
pdb|3S1Q|I Chain I, Rna Polymerase Ii Initiation Complex With A 5-Nt 3'-Deoxy
Rna Soaked With Atp
pdb|3S1R|I Chain I, Rna Polymerase Ii Initiation Complex With A 5-Nt 3'-Deoxy
Rna Soaked With Gtp
pdb|3S2D|I Chain I, Rna Polymerase Ii Initiation Complex With A 5-Nt Rna
Containing A 5br- U
pdb|3S2H|I Chain I, Rna Polymerase Ii Initiation Complex With A 6-Nt Rna
Containing A 2[prime]-Iodo Atp
pdb|3J0K|I Chain I, Orientation Of Rna Polymerase Ii Within The Human
Vp16-Mediator-Pol Ii-Tfiif Assembly
pdb|4A3C|I Chain I, Rna Polymerase Ii Initial Transcribing Complex With A 5nt
Dna-Rna Hybrid
pdb|4A3B|I Chain I, Rna Polymerase Ii Initial Transcribing Complex With A 4nt
Dna-Rna Hybrid
pdb|4A3D|I Chain I, Rna Polymerase Ii Initial Transcribing Complex With A 6nt
Dna-Rna Hybrid
pdb|4A3E|I Chain I, Rna Polymerase Ii Initial Transcribing Complex With A 5nt
Dna-Rna Hybrid And Soaked With Ampcpp
pdb|4A3F|I Chain I, Rna Polymerase Ii Initial Transcribing Complex With A 6nt
Dna-Rna Hybrid And Soaked With Ampcpp
pdb|4A3J|I Chain I, Rna Polymerase Ii Initial Transcribing Complex With A 2nt
Dna-Rna Hybrid And Soaked With Gmpcpp
pdb|4A3K|I Chain I, Rna Polymerase Ii Initial Transcribing Complex With A 7nt
Dna-Rna Hybrid
pdb|4A3L|I Chain I, Rna Polymerase Ii Initial Transcribing Complex With A 7nt
Dna-Rna Hybrid And Soaked With Ampcpp
pdb|4A3M|I Chain I, Rna Polymerase Ii Initial Transcribing Complex With A 4nt
Dna-Rna Hybrid And Soaked With Ampcpp
pdb|4A3G|I Chain I, Rna Polymerase Ii Initial Transcribing Complex With A 2nt
Dna-Rna Hybrid
pdb|4A3I|I Chain I, Rna Polymerase Ii Binary Complex With Dna
pdb|4A93|I Chain I, Rna Polymerase Ii Elongation Complex Containing A Cpd
Lesion
pdb|4BBR|I Chain I, Structure Of Rna Polymerase Ii-tfiib Complex
pdb|4BBS|I Chain I, Structure Of An Initially Transcribing Rna Polymerase Ii-
Tfiib Complex
Length = 122
Score = 29.6 bits (65), Expect = 7.7, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 159 CNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNL 201
CN+ +YP +D +R+ F +T + G YR + + N+
Sbjct: 10 CNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNI 52
>pdb|1AXN|A Chain A, The High Resolution Structure Of Annexin Iii Shows
Differences With Annexin V
Length = 323
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 14/79 (17%)
Query: 351 EIFRTDGDLLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPEL 410
E + D L K + K E+ W TDE+ E+L CL+ FP KL +
Sbjct: 166 ESLKVDEHLAKQDAQILYKAGENRWGTDEDKFTEIL---------CLRSFPQL-KLTFDE 215
Query: 411 YGNQRSTITQNDIENNLDG 429
Y N I+Q DI +++ G
Sbjct: 216 YRN----ISQKDIVDSIKG 230
>pdb|1AII|A Chain A, Annexin Iii
Length = 323
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 14/79 (17%)
Query: 351 EIFRTDGDLLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPEL 410
E + D L K + K E+ W TDE+ E+L CL+ FP KL +
Sbjct: 166 ESLKVDEHLAKQDAQILYKAGENRWGTDEDKFTEIL---------CLRSFPQL-KLTFDE 215
Query: 411 YGNQRSTITQNDIENNLDG 429
Y N I+Q DI +++ G
Sbjct: 216 YRN----ISQKDIVDSIKG 230
>pdb|3QT1|I Chain I, Rna Polymerase Ii Variant Containing A Chimeric Rpb9-C11
Subunit
Length = 133
Score = 29.6 bits (65), Expect = 8.6, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 159 CNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNL 201
CN+ +YP +D +R+ F +T + G YR + + N+
Sbjct: 30 CNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNI 72
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,543,311
Number of Sequences: 62578
Number of extensions: 1290259
Number of successful extensions: 3207
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3010
Number of HSP's gapped (non-prelim): 38
length of query: 874
length of database: 14,973,337
effective HSP length: 107
effective length of query: 767
effective length of database: 8,277,491
effective search space: 6348835597
effective search space used: 6348835597
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)