Citrus Sinensis ID: 002843
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 874 | 2.2.26 [Sep-21-2011] | |||||||
| Q9T014 | 1036 | Protein SPA1-RELATED 2 OS | yes | no | 0.900 | 0.759 | 0.440 | 1e-175 | |
| Q9SYX2 | 1029 | Protein SUPPRESSOR OF PHY | no | no | 0.814 | 0.691 | 0.385 | 1e-123 | |
| Q9LJR3 | 845 | Protein SPA1-RELATED 3 OS | no | no | 0.540 | 0.558 | 0.321 | 6e-72 | |
| Q94BM7 | 794 | Protein SPA1-RELATED 4 OS | no | no | 0.407 | 0.448 | 0.385 | 8e-61 | |
| P43254 | 675 | E3 ubiquitin-protein liga | no | no | 0.300 | 0.389 | 0.290 | 1e-27 | |
| P93471 | 672 | E3 ubiquitin-protein liga | N/A | no | 0.286 | 0.372 | 0.299 | 2e-27 | |
| Q8NHY2 | 731 | E3 ubiquitin-protein liga | yes | no | 0.250 | 0.299 | 0.314 | 1e-24 | |
| Q9R1A8 | 733 | E3 ubiquitin-protein liga | yes | no | 0.250 | 0.298 | 0.310 | 5e-24 | |
| Q9Z1Z1 | 1108 | Eukaryotic translation in | no | no | 0.104 | 0.082 | 0.311 | 7e-08 | |
| Q55F45 | 1078 | Probable serine/threonine | no | no | 0.143 | 0.115 | 0.314 | 1e-07 |
| >sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 615 bits (1585), Expect = e-175, Method: Compositional matrix adjust.
Identities = 380/863 (44%), Positives = 505/863 (58%), Gaps = 76/863 (8%)
Query: 4 MDEG-VGEVAPVNAAEGAPLQNKEIEYSLRPESCNNVLESGEMAIP-EGTSSDGSFQILA 61
MDEG VG+V+ ++ A+ A LQ K E S +PE+ V E E+ + E S D S+ ++A
Sbjct: 2 MDEGSVGDVSRIDEADVAHLQFKNSEQSFKPENIE-VREVKEVQVQREAGSPDCSYGVIA 60
Query: 62 DMLEGKSVNRIVSPMDASENPCP--HSDSDAGIMVEELTVRKSNSSNLAIVGTSNHRERI 119
D L+GK+ V + PC + +D G +VEELTV+ S++AIVG + R R+
Sbjct: 61 DFLDGKNGGDHVELI--GNEPCSSRQNTNDEGDVVEELTVKTCEGSSMAIVGRPSSRARL 118
Query: 120 STRHDRWQHLYQLGSGSGSGSSRGDRGHGRTMLGAWEDVGDTSLHDF----ITQKPLNDE 175
++ H + L SS + R + + G SL + + +N E
Sbjct: 119 EMNRSQFLHRFPLDGDLPGSSSMSKKVIDRGTVSILRNAGKMSLPETSNGQLAIIAVNGE 178
Query: 176 HNTILEQSANTENDGLSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAF 235
N E N E + + LSH I+TKMLS+SGFS+FFV+ TLKGKG+ RGPP N
Sbjct: 179 AN---EHLTNVERNPVPVEALSHEGIKTKMLSQSGFSQFFVRKTLKGKGVTFRGPPNNRS 235
Query: 236 KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295
K R T A ++G+ +V +N S K +G L + T
Sbjct: 236 KARNMDQQTVA-------------SSGSALVIANTSAKISSSIPLAAYDGLPCLPSNTSK 282
Query: 296 PASCW-IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLD 354
P+SC +G G++LREWL + + + EC+YIFRQIV VD H+QGV D
Sbjct: 283 PSSCANPSDTHRGCGGEGLSLREWLKSERQEVNKAECMYIFRQIVDHVDCSHSQGVVLCD 342
Query: 355 LKPSSFKLLQSNQVKYIGPIIQKETLESA--SLDIPHSENYRLRRRSAEEEMFTTGIASA 412
L+PSSFK+ + N VKY+ Q+E+ +S + EN +RRR + + A
Sbjct: 343 LRPSSFKIFKENAVKYVVSGSQRESFDSNMNKETLSQLENPLVRRRLGDTSSLSI---PA 399
Query: 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSK 472
KKQK + SR W +F G I+T N N+ +I H +++ H S
Sbjct: 400 KKQKSSGPS--SRQWPMFQRAGGVNIQTEN----NDGAIQEFHFRSSQPHC-------ST 446
Query: 473 SSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSE 532
+ P TSVSEQLEEKWYASPEEL G + + SSNIYSLG+L +EL +F E
Sbjct: 447 VACPF---------TSVSEQLEEKWYASPEELRGDMRSASSNIYSLGILLYELLSQFQCE 497
Query: 533 RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592
RA AAMSD+R RILPP FLSENPKEAGFCLW LHPE RP+TR+ILQSEV N ++
Sbjct: 498 RAREAAMSDIRHRILPPKFLSENPKEAGFCLWLLHPESSCRPSTRDILQSEVVNGIPDLY 557
Query: 593 AEELLSSIDQDDSESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKPL 652
AE L SI+Q+D+ESELL HFL +E++Q A L+ EI S+EADI+E+ +R P
Sbjct: 558 AEGLSLSIEQEDTESELLQHFLFLSQEKRQKHAGNLMEEIASVEADIEEIVKRRCAIGP- 616
Query: 653 VDPSLQNESAPSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLNQLERAYFSMRSQIQL 712
PSL+ S+ S S EMRL+RN+NQLE AYF+ R L
Sbjct: 617 --PSLEEASSSSPA------------------SSVPEMRLIRNINQLESAYFAARIDAHL 656
Query: 713 SDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRT 772
++ R D DLLR+ +N ++ E + DR+GAFFDGLCKYARYSKFE +G+LRT
Sbjct: 657 PEARYRLRPDRDLLRNSDNTVAEVENSETWSSDDRVGAFFDGLCKYARYSKFETRGVLRT 716
Query: 773 GEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLS 832
E NN++NVICS+ FDRDED+FA AGVSKKIKI+EFN+LFN+SVD++YPA+EM NRSKLS
Sbjct: 717 SELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLS 776
Query: 833 CVCWNNYIKNYLASADYDGVVKV 855
VCWNNYI+NYLAS+DYDG+VK+
Sbjct: 777 GVCWNNYIRNYLASSDYDGIVKL 799
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Involved in suppression of photomorphogenesis in dark-grown seedlings. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SYX2|SPA1_ARATH Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust.
Identities = 316/820 (38%), Positives = 451/820 (55%), Gaps = 108/820 (13%)
Query: 66 GKSVNRIVSPMDASENPCPHSDSDAGIMVEELTVRKSNSSNLAIVGTSNHRERISTRHDR 125
G S +R V D ++ P P + A + VEELT+ N IV SN+ S R +
Sbjct: 51 GSSAHRNV---DLTKPPPPEEAAGAKLSVEELTL-----GNYRIVQGSNNTNVDSPRAGK 102
Query: 126 WQHLYQLGSGSGSGSSRGD-----RGHGRTMLGAWEDVGDT-----SLHDFITQKPLNDE 175
++HLY+L GS + GD R + + + + +L F++++ +
Sbjct: 103 FEHLYRLARGSAFRAGDGDLDSQPRDMDQMLSRIRQQLAGAPSERQNLKPFMSRRSDQNL 162
Query: 176 HNTILEQSANTENDGLSGNMLSHGSIRTKM-LSKSGFSEFFVKTTLKGKGIVCRG---PP 231
A EN ++ L ++ K +S S FS+ +K +KGKG+V + PP
Sbjct: 163 EAFSERLRAAGENSIMNAPALISEGVQMKTPVSSSNFSQLLLKRAMKGKGVVGKNQETPP 222
Query: 232 LNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290
+ G + K ++ + P D ++ +SPK G +VS+G +
Sbjct: 223 EFVSDQDLGSKEKKLDISKSPTPHD---------VLPLKSSPK----GNGMVSHGDGN-- 267
Query: 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGV 350
S G++LRE+L + K ++ L +FRQ+V LVD H++ +
Sbjct: 268 ---------------HSKSSIGISLREFLRSSYAKREKRHGLCLFRQLVELVDSAHSKRL 312
Query: 351 TFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIA 410
LDL+PS F L+ S +++YIG K LES D+ N RRR EE ++G
Sbjct: 313 FLLDLRPSLFTLVPSKKLRYIGNF-GKNDLES---DVDEDLN---RRRPVVEES-SSGGR 364
Query: 411 SAKKQKFNHNMNFSRWWSLFPSKYGNKIETAN-------ESDINEVSIPHSHN-DTNEHH 462
+KK+K + ++N GN+++ + +S + ++++ + N D+ E
Sbjct: 365 DSKKRKMDLHLN----------SPGNQLQATSTGRPFKRKSPVIDLNMVDARNPDSCELQ 414
Query: 463 TNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLF 522
N S VS+ +++QS +S LEE+WY PEE++G SNIY+LGVL
Sbjct: 415 QQDYIKNLS------VSSVSRKQS--MSTWLEEQWYTCPEEINGEDIGEKSNIYALGVLL 466
Query: 523 FELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582
FEL +S AA M+DLR RILPP+FLS+ PKEAGFCLW LHPEP SRP+ R+IL+S
Sbjct: 467 FELLCHCESGEMHAAMMADLRHRILPPTFLSKYPKEAGFCLWLLHPEPSSRPSARDILKS 526
Query: 583 EVTNEFQEVCAEELLSSIDQDDSESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEV 642
E+ +C ++ + S + SELLLHFL SLE +K+ +ASKL+ +I++LE DIKE
Sbjct: 527 EL------ICEDDSVKSTAAAEEISELLLHFLSSLEVQKKKKASKLLQDIQTLEDDIKEA 580
Query: 643 ERRHYLKKPLVDPSLQNESAPSRENRY----FNEQLSSSEAQLSPISDANEMRLMRNLNQ 698
ERR+ LV S + E R +E ++S A P AN RLM N+ Q
Sbjct: 581 ERRYSSNVSLV------RSHGAIEKRVQSSPLDEHCTTSSALFVPT--ANTDRLMSNIRQ 632
Query: 699 LERAYFSMRSQIQLSDSDSTTRADNDLL-RDR--ENLFLAQQDQEIQNPTDRLGAFFDGL 755
LE AYF MRSQI LS S +T R+D L RDR EN Q +D+L FF+GL
Sbjct: 633 LEDAYFFMRSQINLSSSAATARSDKTLKDRDRCSENQNENQDMSTKGKSSDQLEVFFEGL 692
Query: 756 CKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDS 815
CK+ARYSKFE G +R+G+ NSA+V+CS+SFD DE+H AAAG+SKKIKIF+FNA N+S
Sbjct: 693 CKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISKKIKIFDFNAFMNES 752
Query: 816 VDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKV 855
V V+YP VEM N+SKLSCVCWN+YIKNYLAS DYDGVV++
Sbjct: 753 VGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQI 792
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Controls normal photoperiodic flowering and regulates circadian rhythms. Required for suppression of photomorphogenesis in dark-grown seedlings and for normal elongation growth of adult plants. Integral component of the COP1/SPA E3 ubiquitin-protein ligase complex. Involved in HY5, HFR1, LAF1 and CO degradation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: - EC: . EC: - |
| >sp|Q9LJR3|SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 273 bits (697), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 195/606 (32%), Positives = 288/606 (47%), Gaps = 134/606 (22%)
Query: 313 VNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI- 371
V+LR+WL+ ECL++FRQIV +V+ H+QG+ +++PS F + N V +I
Sbjct: 76 VSLRQWLDKPERSVDVFECLHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 135
Query: 372 --------------GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417
GPI QKE S RR EE + IA +K +
Sbjct: 136 SASCSDSGSDSLEDGPISQKEIGSS--------------RR---EEAVSKAIAIEEKGVY 178
Query: 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPL 477
N + KIE E + H
Sbjct: 179 NKLLE-------------RKIEKLEEEKTQPFPMKHIL---------------------- 203
Query: 478 VSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
+E WY SPEE G T +S++Y LGVL FELF S +
Sbjct: 204 --------------AMETSWYTSPEEDFGSSSTCASDVYRLGVLLFELFCPVPSREEKSR 249
Query: 538 AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEELL 597
MS LR R+LPP L + PKEA FCLW LHPEP RP+ ++LQSE E ++ EE
Sbjct: 250 TMSSLRHRVLPPQILLKCPKEASFCLWLLHPEPTCRPSMSDLLQSEFITEPRD-NLEERE 308
Query: 598 SSIDQDD--SESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKK----- 650
++I+ D E E LL FL+ +++ KQ A +L + L +DI++V +R + K
Sbjct: 309 AAIELRDRIEEQESLLEFLLLIQQRKQESAYRLQDTVSLLSSDIEQVVKRQLILKKRGSS 368
Query: 651 ---------------PLVDPSLQNESAPS----RENRYFNEQLS-------SSEAQLSPI 684
PL+ S Q PS R L+ E+Q S +
Sbjct: 369 LSDFSKDDHQYTSGQPLM--SFQANEEPSAFLASRKRVRQGILALENGVEVDEESQGSTL 426
Query: 685 SDANEMRLMRNLNQLERAYF-SMRSQIQLSDS-DSTTRADNDLLRDRENLFLAQQDQEIQ 742
+++ RLMRN +LE YF + R Q++ + S S TR + + + +
Sbjct: 427 LESS--RLMRNFKKLESVYFLTRRRQMKAAASGKSLTRHSPLSSENGRGSMIVSEKSSVS 484
Query: 743 NPT---------DRLGA----FFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDR 789
NP R G F +GLC+Y +S+ V+ L+ G+ NS+N++C+++FDR
Sbjct: 485 NPVAPKAFFNNDSRQGGWIDPFLEGLCRYLSFSQLRVKADLKQGDLLNSSNLVCALAFDR 544
Query: 790 DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY 849
+ + FA AGV+KKIKIFE N++ ND+ D++YP VE++ RSKLS +CWN+YIK+ +AS+++
Sbjct: 545 EGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASSNF 604
Query: 850 DGVVKV 855
DGVV++
Sbjct: 605 DGVVQI 610
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Repressor of photomorphogenesis in the light. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q94BM7|SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 236 bits (601), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 220/392 (56%), Gaps = 36/392 (9%)
Query: 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFL 552
+E WY S EE +G +C +S+IY LGVL FELF S + MS LR R+LPP L
Sbjct: 176 MEMSWYTSHEEDNGSLCNCASDIYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQIL 235
Query: 553 SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAE-ELLSSIDQDDSESELLL 611
PKEA FCLW LHPEP RP+ E+LQSE NE +E E E + E ELLL
Sbjct: 236 LNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIEEQELLL 295
Query: 612 HFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYL--------------KKPLVDPSL 657
FL +++ KQ A KL I L +DI +V +R + +K + +
Sbjct: 296 EFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQQKGRDVRSFLASRKRIRQGAE 355
Query: 658 QNESAPSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLNQLERAYFSMR-SQIQLSDSD 716
+ ++ +E+ + S + +++ RLMRNL +LE YF+ R QI+
Sbjct: 356 TTAAEEENDDNSIDEESKLDDTLESTLLESS--RLMRNLKKLESVYFATRYRQIK----- 408
Query: 717 STTRADNDLLR----------DRENLFLAQQDQEIQNPTDRLG---AFFDGLCKYARYSK 763
+ T A+ L R E ++Q ++ N + + G F +GLCKY +SK
Sbjct: 409 AATAAEKPLARYYSALSCNGRSSEKSSMSQPSKDPINDSRQGGWIDPFLEGLCKYLSFSK 468
Query: 764 FEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAV 823
V+ L+ G+ NS+N++C+I FDRD + FA AGV+KKIKIFE ++ D D++YP V
Sbjct: 469 LRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVV 528
Query: 824 EMSNRSKLSCVCWNNYIKNYLASADYDGVVKV 855
E+++RSKLS +CWN+YIK+ +AS++++GVV+V
Sbjct: 529 ELASRSKLSGICWNSYIKSQVASSNFEGVVQV 560
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Repressor of photomorphogenesis in the light. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|P43254|COP1_ARATH E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 166/337 (49%), Gaps = 74/337 (21%)
Query: 577 REILQSEVTNEFQEVCAEELLS-------SIDQDDSES--ELLLHFLISLEEEKQNQASK 627
RE LQ +EV + LL+ ++Q+++E ++LL FL L ++K ++ ++
Sbjct: 127 REALQRGCDVSIKEV--DNLLTLLAERKRKMEQEEAERNMQILLDFLHCLRKQKVDELNE 184
Query: 628 LVGEIRSLEADIKEVER----------RHYLKKPLV--DPSLQNESAPSRENRYFN---- 671
+ +++ ++ DI VER R+ +K ++ DPS +N + FN
Sbjct: 185 VQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPHEKNQIGFNSNSL 244
Query: 672 ------------------------------EQLSSSEAQ---LSPISDANEMRLMRNLNQ 698
+ LS S++Q S +S A + R+ N
Sbjct: 245 SIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARKKRIHAQFND 304
Query: 699 LERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKY 758
L+ Y R Q L+D ++ + ++ + RE ++ L F L +
Sbjct: 305 LQECYLQKRRQ--LADQPNSKQENDKSVVRREGY------------SNGLADFQSVLTTF 350
Query: 759 ARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDV 818
RYS+ V +R G+ +SAN++ SI FDRD++ FA AGVS+ IK+F+F+++ N+ D+
Sbjct: 351 TRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADM 410
Query: 819 YYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKV 855
P VEMS RSKLSC+ WN + KN++AS+DY+G+V V
Sbjct: 411 QCPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTV 447
|
E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors such as HY5, HYH and LAF1. Down-regulates MYB21, probably via ubiquitination process. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways. Arabidopsis thaliana (taxid: 3702) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|P93471|COP1_PEA E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 154/301 (51%), Gaps = 51/301 (16%)
Query: 600 IDQDDSES--ELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVER----------RHY 647
++Q+++E ++LL FL L ++K ++ ++ +++ ++ DI VE+ R+
Sbjct: 150 MEQEEAERNMQILLDFLHCLRKQKVDELKEVQTDLQFIKEDIGAVEKHRMDLYRARDRYS 209
Query: 648 LKKPLVDPSLQNESAPSRENRYFNEQLSSSEAQLSPI------SDANEMRLMRNLNQLER 701
+K ++D S R++R+ + L+SS SP+ S + + +Q+
Sbjct: 210 VKLRMLDDS------GGRKSRHSSMDLNSSGLASSPLNLRGGLSSGSHTKKNDGKSQISS 263
Query: 702 AYFSM--RSQIQLSDSDSTTRADNDLLR---------DRENLFLAQQDQEIQNPTDR--- 747
+ R I SDS ++ L+R D + +L ++ Q P +
Sbjct: 264 HGHGIQRRDPITGSDSQYINQSGLALVRKKRVHTQFNDLQECYLQKRRQAADKPHGQQER 323
Query: 748 -------------LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHF 794
L F L + RYS+ V +R G+ +SAN++ SI FDRD+D F
Sbjct: 324 DTNFISREGYSCGLDDFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDDLF 383
Query: 795 AAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854
A AGVS++IK+F+F+A+ N+ D + P VEM+ RSKLSC+ WN Y KN +AS+DY+G+V
Sbjct: 384 ATAGVSRRIKVFDFSAVVNEPTDAHCPVVEMTTRSKLSCLSWNKYAKNQIASSDYEGIVT 443
Query: 855 V 855
V
Sbjct: 444 V 444
|
E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways. Pisum sativum (taxid: 3888) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q8NHY2|RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 129/261 (49%), Gaps = 42/261 (16%)
Query: 608 ELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKPLV-DPSLQNESAPSRE 666
++L+ FL K+ Q ++ E+ LE DIK VE L P+ D ++ APS
Sbjct: 262 QILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPS 321
Query: 667 NRYFNEQL---------SSSEAQLSPISDAN----EMRLMRNLNQLERAYFSMRSQIQLS 713
+ + SS+ + P ++ RL + LE+ YFS R ++S
Sbjct: 322 HSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMS-RIS 380
Query: 714 DSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLR-T 772
D DS T + +L F + L K+ RY+ L
Sbjct: 381 D-DSRTAS-------------------------QLDEFQECLSKFTRYNSVRPLATLSYA 414
Query: 773 GEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLS 832
+ N ++++ SI FDRD D+FA AGV+KKIK++E++ + D+VD++YP EM+ SK+S
Sbjct: 415 SDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKIS 474
Query: 833 CVCWNNYIKNYLASADYDGVV 853
C+ W++Y KN LAS+DY+G V
Sbjct: 475 CISWSSYHKNLLASSDYEGTV 495
|
E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in JUN ubiquitination and degradation. Directly involved in p53 (TP53) ubiquitination and degradation, thereby abolishing p53-dependent transcription and apoptosis. Ubiquitinates p53 independently of MDM2 or RCHY1. Probably mediates E3 ubiquitin ligase activity by functioning as the essential RING domain subunit of larger E3 complexes. In contrast, it does not constitute the catalytic RING subunit in the DCX DET1-COP1 complex that negatively regulates JUN, the ubiquitin ligase activity being mediated by RBX1. Homo sapiens (taxid: 9606) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q9R1A8|RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 128/261 (49%), Gaps = 42/261 (16%)
Query: 608 ELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKPLV-DPSLQNESAPSRE 666
++L+ FL K+ Q ++ E+ LE DIK VE L P+ D ++ APS
Sbjct: 264 QILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPS 323
Query: 667 NRYFNEQL---------SSSEAQLSPISDAN----EMRLMRNLNQLERAYFSMRSQIQLS 713
+ + +S+ + P ++ RL + LE+ YFS R ++S
Sbjct: 324 HSSIIDSTEYSQPPGFSGTSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMS-RIS 382
Query: 714 DSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLR-T 772
D DS T + +L F + L K+ RY+ L
Sbjct: 383 D-DSRTAS-------------------------QLDEFQECLSKFTRYNSVRPLATLSYA 416
Query: 773 GEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLS 832
+ N ++++ SI FDRD D+FA AGV+KKIK++E+ + D+VD++YP EM+ SK+S
Sbjct: 417 SDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKIS 476
Query: 833 CVCWNNYIKNYLASADYDGVV 853
C+ W++Y KN LAS+DY+G V
Sbjct: 477 CISWSSYHKNLLASSDYEGTV 497
|
E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in JUN ubiquitination and degradation. Directly involved in p53 (TP53) ubiquitination and degradation, thereby abolishing p53-dependent transcription and apoptosis. Ubiquitinates p53 independently of MDM2 or RCHY1. Probably mediates E3 ubiquitin ligase activity by functioning as the essential RING domain subunit of larger E3 complexes. In contrast, it does not constitute the catalytic RING subunit in the DCX DET1-COP1 complex that negatively regulates JUN, the ubiquitin ligase activity being mediated by RBX1. Mus musculus (taxid: 10090) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q9Z1Z1|E2AK3_RAT Eukaryotic translation initiation factor 2-alpha kinase 3 OS=Rattus norvegicus GN=Eif2ak3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSF 551
Q+ K Y SPE++ G + +I+SLG++ FEL F ++ ++D+R+ PP F
Sbjct: 976 QVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLF 1035
Query: 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584
+ P+E L P P+ RP +I+++ V
Sbjct: 1036 TQKYPQEHMMVQDMLSPSPMERPEATDIIENAV 1068
|
Phosphorylates the alpha subunit of eukaryotic translation-initiation factor 2 (EIF2), leading to its inactivation and thus to a rapid reduction of translational initiation and repression of global protein synthesis. Serves as a critical effector of unfolded protein response (UPR)-induced G1 growth arrest due to the loss of cyclin-D1 (CCND1). Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q55F45|Y8642_DICDI Probable serine/threonine-protein kinase DDB_G0268642 OS=Dictyostelium discoideum GN=DDB_G0268642 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 18/143 (12%)
Query: 498 YASPEELS-------GGVCTT----SSNIYSLGVLFFELF-GRFDSERALAAAMSDLRDR 545
YASPE+LS GG T ++IYS G++ FE+ G F+++ + +L++
Sbjct: 930 YASPEQLSNKGVFGGGGYTNTWYTNKTDIYSCGIILFEMIVGGFETQFERTTHIKNLKNG 989
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLSSIDQDDS 605
ILP F S++P+E+ L + P +RPT+ +IL E + E ID D
Sbjct: 990 ILPSWFTSKHPEESNLILRMIDINPDNRPTSDQILS-----ELLPILIEASERDIDHFDY 1044
Query: 606 ESELLLHFLISLEEEKQNQASKL 628
E +L LIS+ ++K + + L
Sbjct: 1045 E-KLDQQTLISIIKKKDLEIASL 1066
|
Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 874 | ||||||
| 255537717 | 1044 | ubiquitin ligase protein cop1, putative | 0.913 | 0.764 | 0.564 | 0.0 | |
| 359473903 | 1054 | PREDICTED: protein SPA1-RELATED 2-like, | 0.919 | 0.762 | 0.541 | 0.0 | |
| 224075074 | 1020 | predicted protein [Populus trichocarpa] | 0.891 | 0.763 | 0.504 | 0.0 | |
| 449452259 | 1036 | PREDICTED: protein SPA1-RELATED 2-like [ | 0.898 | 0.757 | 0.495 | 0.0 | |
| 356495711 | 1129 | PREDICTED: protein SPA1-RELATED 2-like [ | 0.939 | 0.727 | 0.464 | 0.0 | |
| 356540404 | 1103 | PREDICTED: protein SPA1-RELATED 2-like [ | 0.921 | 0.729 | 0.467 | 0.0 | |
| 356527668 | 1012 | PREDICTED: protein SPA1-RELATED 2-like [ | 0.867 | 0.749 | 0.459 | 0.0 | |
| 357481459 | 1323 | Histone acetyltransferase type B subunit | 0.816 | 0.539 | 0.484 | 1e-180 | |
| 297809331 | 1032 | hypothetical protein ARALYDRAFT_911432 [ | 0.898 | 0.760 | 0.437 | 1e-175 | |
| 145340093 | 1036 | protein SPA1-related 2 [Arabidopsis thal | 0.900 | 0.759 | 0.440 | 1e-173 |
| >gi|255537717|ref|XP_002509925.1| ubiquitin ligase protein cop1, putative [Ricinus communis] gi|223549824|gb|EEF51312.1| ubiquitin ligase protein cop1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/861 (56%), Positives = 591/861 (68%), Gaps = 63/861 (7%)
Query: 4 MDEGVG-EVAPVNAAEGAPLQNKEIEYSLRPESCNNVLESGEMAIP-EGTSSDGSFQILA 61
MDEG+G E+AP+N E A L +KE EYS++P +NVLES E+ IP EG ++ SF +LA
Sbjct: 1 MDEGLGDEMAPLNMTERAHLHSKENEYSIKPPESSNVLESHEIIIPGEGDYTESSFHVLA 60
Query: 62 DMLEGKSVNRIVSPMDASENPC--PHSDSDAGIMVEELTVRKSNSSNLAIVGTSNHRERI 119
D+L+ K++NR PMDASE C P +AG MVEELTVR +SSNLAIVGTSN RERI
Sbjct: 61 DILDAKNLNRSGVPMDASEQLCTNPRFMDNAGNMVEELTVRNYDSSNLAIVGTSNFRERI 120
Query: 120 STRHDRWQHLYQLGSGSGSGSSRGD---RGHGRTMLGAWEDVGDTSLHDFITQKPLNDEH 176
TR +WQHLYQLG SG GSS R +G+ M ED S F++ K +D+
Sbjct: 121 QTRQGQWQHLYQLGGASGIGSSCTKTLYRDNGQEMSSPLEDARYASSPVFLSHKTSSDDC 180
Query: 177 NTILEQSANTENDGLSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFK 236
N ++EQSAN +N GLS NM+SHG IRTK+LSKSGFSE+FVK+TLKGKGI+ RGP
Sbjct: 181 NEVVEQSANAKNKGLSQNMISHGGIRTKILSKSGFSEYFVKSTLKGKGIIFRGP------ 234
Query: 237 ERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296
GA + N + T SN SL+LG +T +P
Sbjct: 235 ----------------------THEGAKLAPRNENTGKAATVTLAASNSSLNLGVKTTLP 272
Query: 297 ASCWIGGLRQGSSDH-GVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDL 355
S I G R +DH G+ L+ WLNAR HK +++CL+IF++IV LVDY H++GV DL
Sbjct: 273 CSFGITGPRPAGADHDGIGLQHWLNARQHKVNKVDCLHIFKRIVDLVDYSHSKGVALHDL 332
Query: 356 KPSSFKLLQSNQVKYIGPIIQKETLESA-SLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414
+PS FKLLQSNQV YIG ++K+T + A D+P +EN+ RRR+AE+ +F AKK
Sbjct: 333 RPSCFKLLQSNQVNYIGSAVEKDTFDRAMDRDVPSTENHVARRRAAEQGIFPFVGILAKK 392
Query: 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSS 474
QKF+ N N R W LF +K+G K ETAN+ D+ S S ++ EH N + + S
Sbjct: 393 QKFSENANSLRQWPLFTAKHGLKFETANDGDLGLASTQDSRSEVAEHIPNTEYRIQGRIS 452
Query: 475 SPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA 534
L SN AQQQ S++++LE+KWYASPEELS G+CT SSNIYSLGVL FEL G FDSER
Sbjct: 453 HQL-SNAAQQQLASITDRLEDKWYASPEELSQGICTMSSNIYSLGVLLFELLGHFDSERG 511
Query: 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAE 594
A AM+DLR RILPP FLSENPKEAGFCLW +HPEP SRPTTREILQSEV N QEV E
Sbjct: 512 HATAMADLRHRILPPHFLSENPKEAGFCLWLIHPEPSSRPTTREILQSEVINGLQEVSVE 571
Query: 595 ELLSSIDQDDSESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKPLVD 654
EL SSIDQDD+ESELLLHFL L+E KQN ASKL EIR +EADI EV RR+ L+K L +
Sbjct: 572 ELSSSIDQDDAESELLLHFLCLLKEHKQNHASKLADEIRCIEADIGEVARRNCLEKSLAN 631
Query: 655 PSLQNESAPSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLNQLERAYFSMRSQIQLSD 714
QLS +S N+MRL + QLE AYFSMRSQIQL
Sbjct: 632 -------------------------QLSCVSRTNDMRLNNIIRQLESAYFSMRSQIQLPK 666
Query: 715 SDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGE 774
+D+TT D D+LR+REN + A + E +NPTD LG+FFDGLCKYARYSKFEV+G+LRTG+
Sbjct: 667 TDATTNQDMDVLRNRENCYFALEGDEKENPTDCLGSFFDGLCKYARYSKFEVRGLLRTGD 726
Query: 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCV 834
FNNSANVICS+SFDRD D+FA AGVSKKIKIFEFN+L NDSVD++YP +EMSN+SKLSC+
Sbjct: 727 FNNSANVICSLSFDRDMDYFATAGVSKKIKIFEFNSLLNDSVDIHYPVIEMSNKSKLSCI 786
Query: 835 CWNNYIKNYLASADYDGVVKV 855
CWN YIKNYLAS DYDGVVK+
Sbjct: 787 CWNTYIKNYLASTDYDGVVKL 807
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359473903|ref|XP_002271391.2| PREDICTED: protein SPA1-RELATED 2-like, partial [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/864 (54%), Positives = 587/864 (67%), Gaps = 60/864 (6%)
Query: 1 MDDMDEGVGEVAPVNAAEGAPLQNKEIEYSLRPESCNNVLESGEMAIP-EGTSSDGSFQI 59
+DDMD+ EV ++ AEG+ LQ KE EY L+P+S +++L S EM IP EG + S Q
Sbjct: 5 LDDMDD---EVTTIDVAEGSHLQRKESEYLLKPDS-SSMLNSREMVIPGEGDYPESSPQE 60
Query: 60 LADMLEGKSVNRIVSPMDASENPCPHS--DSDAGIMVEELTVRKSNSSNLAIVGTSNHRE 117
+LEGK+VN+ VS + A+E+ C DAGIM+EELT+R N +NLA+VG SN+R+
Sbjct: 61 FTGILEGKNVNKTVSSLAAAEHTCSGHLPVDDAGIMIEELTLRNYNGANLAVVGPSNNRD 120
Query: 118 RISTRHDRWQHLYQLGSGSGSGSSRGD---RGHGRTMLGAWEDVGDTSLHDFITQKPLND 174
R+ R ++WQH++ L G G+GSS D R +G+ M AWEDVG +S +F+ QK +
Sbjct: 121 RMQIRQNQWQHIHLLAGGQGTGSSVRDSVRRDNGQPMSSAWEDVGYSSFPEFLAQKQSSH 180
Query: 175 EHNTILEQSANTENDGLSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPPLNA 234
+HN + EQ N EN +SG+ LS G IRTK+LSKSGFSEFF+K +LKGKG++CRGP +
Sbjct: 181 DHNEVREQVTNCENRAVSGDTLSPGGIRTKILSKSGFSEFFIKNSLKGKGVICRGPARDG 240
Query: 235 FK-ERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGART 293
F E R TKA V TT+ SD +L ++ V S ++GS G
Sbjct: 241 FGVEIRDSNITKAAVDTTVASDLSLSSSAKTAVPS--------------AHGSAGTGPCH 286
Query: 294 G-VPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTF 352
G +P SS GVNLREWL A K ++E LYIFRQIV LVD H+QGV
Sbjct: 287 GPLP----------DSSHDGVNLREWLRAGHRKINKVESLYIFRQIVDLVDVSHSQGVAM 336
Query: 353 LDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412
+L+PS FKLL SNQV Y+G +Q+E LE+A +N +RS E+ MF + S
Sbjct: 337 QNLRPSCFKLLPSNQVAYLGSSVQREMLENAVDQDVSLKNLLSGKRSLEKGMFPSISLSG 396
Query: 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN-EHHTNAGFGNYS 471
KKQKF+ +MN R W F ++YG K+ETAN+S IN + N EH+ N +
Sbjct: 397 KKQKFSESMNTFRQWPQFSARYGIKLETANKSGINITRAQDLGSKFNEEHNQNTEYKIQR 456
Query: 472 KSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS 531
KSSS VS T+QQ S S++LEEKWY SP ELS GVCT SSNIY LGVL FEL G FDS
Sbjct: 457 KSSSQNVSYTSQQLLISASDRLEEKWYTSPMELSEGVCTFSSNIYCLGVLLFELLGSFDS 516
Query: 532 ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591
E+A AAA+SDLR RILPP+FLSENPKEAGFCLW LHPE SRPTTREILQSEV + QEV
Sbjct: 517 EKARAAAVSDLRHRILPPNFLSENPKEAGFCLWLLHPESSSRPTTREILQSEVISGLQEV 576
Query: 592 CAEELLSSIDQDDSESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKP 651
+L SSI+Q+D +SELLLHFLI ++E+K A+KLV +IR LEADI+EVERR KK
Sbjct: 577 HEGDLSSSIEQEDVDSELLLHFLILMKEQKHKHATKLVEDIRCLEADIEEVERRTSPKKS 636
Query: 652 LVDPSLQNESAPSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLNQLERAYFSMRSQIQ 711
+ LS S + I A+E RLMRN++QLE AYFSMRS+IQ
Sbjct: 637 SL--------------------LSCSHK--TAIC-ASEKRLMRNISQLESAYFSMRSKIQ 673
Query: 712 LSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLR 771
L ++D+ TR+D DLL +REN + AQ++ E TDRLG FF+GLCKYARYSKFEV+G+LR
Sbjct: 674 LPETDALTRSDKDLLLNRENFYQAQKNGEDLKVTDRLGTFFNGLCKYARYSKFEVRGILR 733
Query: 772 TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKL 831
G+F NSANVICS+SFDRDED+ AAAGVSKKIKIFEF+ALFNDSVD++YP +EM+N+SKL
Sbjct: 734 NGDFINSANVICSLSFDRDEDYLAAAGVSKKIKIFEFHALFNDSVDIHYPVIEMTNKSKL 793
Query: 832 SCVCWNNYIKNYLASADYDGVVKV 855
SC+CWNNYIKNYLAS DYDGVVK+
Sbjct: 794 SCICWNNYIKNYLASTDYDGVVKL 817
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224075074|ref|XP_002304547.1| predicted protein [Populus trichocarpa] gi|222841979|gb|EEE79526.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/864 (50%), Positives = 566/864 (65%), Gaps = 85/864 (9%)
Query: 4 MDEGVG-EVAPVNAAEGAPLQNKEIEYSLRPESCNNVLESGEMAIPE-GTSSDGSFQILA 61
MDEG+G EVA ++ AE A LQ KE EYS++P +N+LES E I G + SF +LA
Sbjct: 1 MDEGLGDEVALMDMAEEAHLQGKESEYSVKPPESSNLLESRETVIASAGDYPESSFHVLA 60
Query: 62 DMLEGKSVNRIVSP-MDASENPC--PHSDSDAGIMVEELTVRKSNSSNLAIVGTSNHRER 118
D LEGK+ NR SP MDAS+ PC P S DAG MVEEL VR + SN A+VGTSN+R+R
Sbjct: 61 DKLEGKNGNRSASPPMDASKQPCSSPRSMDDAGNMVEELMVRNYDGSNSAVVGTSNNRQR 120
Query: 119 ISTRHDRWQHLYQLGSGSGSGSSRGD---RGHGRTMLGAWEDVGDTSLHDFITQKPLNDE 175
+ R +W HLYQ+G GS +G S + R G+ +L DV S D + QK L++E
Sbjct: 121 MQARQSQWPHLYQIGGGSVTGISCSNTLYRDSGQALL----DVQHPSSSDILVQKTLSNE 176
Query: 176 HNTILEQSANTENDGLSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAF 235
N + EQ +T+ +GL GN+ SHGS RTK+LSKSGFSEFFVK TLKGKGI+ RGPP ++
Sbjct: 177 RNEVSEQLVHTDFNGLLGNVSSHGSFRTKILSKSGFSEFFVKNTLKGKGIIYRGPPHDSL 236
Query: 236 KERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTG 294
K + + F T+ SD L N S K V + ++ S+ L+L A+T
Sbjct: 237 KLGPRDQNNERFAGGTLAASDTPL----------NLSAKTVTMTSSYASDTPLNLSAKTV 286
Query: 295 VPASCW-IGGLRQGSSDH-GVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTF 352
S + I G DH GV+LR+WLNA K ++E L IFR+IV LVDY H+QGV
Sbjct: 287 TMTSSYGITGPSPSGYDHDGVSLRKWLNAGQLKANKVERLQIFRRIVDLVDYSHSQGVAL 346
Query: 353 LDLKPSSFKLLQSNQVKYIGPIIQKETLESA-SLDIPHSENYRLRRRSAEEEMFTTGIAS 411
DL+PSSFKLLQSNQVKY+G + ++ LES+ D P S+N+ +RRR E+ MF+ A
Sbjct: 347 PDLRPSSFKLLQSNQVKYLGSAVPRDMLESSMDQDTPCSDNHAVRRRPLEQGMFSFVTAF 406
Query: 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYS 471
AKKQKF+ +MN+ W +K+ K+E+ ++ + +G +
Sbjct: 407 AKKQKFSESMNYISSWPQLSTKHSLKLESTSDGE---------------------YGIQA 445
Query: 472 KSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS 531
KSSS +S T Q+Q T++ ++LEEKWY SPEE + G+C +SNIY LG+L FEL GRFDS
Sbjct: 446 KSSSHELSKTGQRQLTAIVDRLEEKWYTSPEEFNDGICRIASNIYGLGILLFELLGRFDS 505
Query: 532 ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591
+RA A MSDLR L +F G+ + LH + EILQSE+ N QEV
Sbjct: 506 DRAQAMVMSDLRK--LDSAF--------GYFILNLHHAHQQGNPSLEILQSELINGLQEV 555
Query: 592 CAEELLSSIDQDDSESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKP 651
AEEL SSI+QDD+ESELL HFL+SL+E+KQN ASKLV +IR L+ DI+EVE
Sbjct: 556 SAEELSSSINQDDAESELLFHFLVSLKEQKQNHASKLVEDIRCLDTDIEEVE-------- 607
Query: 652 LVDPSLQNESAPSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLNQLERAYFSMRSQIQ 711
P R + +Q+SP N+MRLM N++QLE AYFSMRS++Q
Sbjct: 608 -----------PYRLEAF---------SQVSPDFKTNDMRLMSNISQLESAYFSMRSEVQ 647
Query: 712 LSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLR 771
L+++D+T R DNDLLR+ EN ++ Q+ +E QN TD LG+FFDGLCKYARYSKFEV+G+LR
Sbjct: 648 LAETDATIRQDNDLLRNHENWYIEQEGEETQNTTDCLGSFFDGLCKYARYSKFEVRGLLR 707
Query: 772 TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKL 831
TG+F+NSANVICS+SFDRD D+FAA GVSKKIKIF+FN++FND VD++YP +EMSN SKL
Sbjct: 708 TGDFSNSANVICSLSFDRDADYFAAGGVSKKIKIFDFNSIFNDPVDIHYPVIEMSNESKL 767
Query: 832 SCVCWNNYIKNYLASADYDGVVKV 855
SC+CWN+YIKNYLAS YDGVVK+
Sbjct: 768 SCICWNSYIKNYLASTGYDGVVKL 791
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449452259|ref|XP_004143877.1| PREDICTED: protein SPA1-RELATED 2-like [Cucumis sativus] gi|449501807|ref|XP_004161464.1| PREDICTED: protein SPA1-RELATED 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/866 (49%), Positives = 560/866 (64%), Gaps = 81/866 (9%)
Query: 4 MDEGVGEVAPVNAAEGAPLQNK------EIEYSLRPESCNNVLESGEMAIP-EGTSSDGS 56
M+E ++ ++A E A +QNK E EY L+PE+ NNV+ES EM P +G S
Sbjct: 1 MEEMSEDMTLLDATEDAHVQNKVRQDAQENEYVLKPEN-NNVVESQEMVTPVDGGYSQYY 59
Query: 57 FQILADMLEGKSVNRIVSPMDASENP-C-PHSDSDAGIMVEELTVRKSNSSNLAIVGTSN 114
D+LEGK++NR + + S+ P C PH DAG+MVEELTV+ N SNLAI+G S+
Sbjct: 60 PHEFTDILEGKNLNRCKNNLKLSDQPECSPHCMDDAGVMVEELTVKNHNGSNLAIIGPSD 119
Query: 115 HRERISTRHDRWQHLYQLGSGSGSGSSRGD---RGHGRTMLGAWEDVGDTSLHDFITQKP 171
+R R+ +RH +WQHLYQLGSGSGSGSSR D + HG + E+ G TS + +
Sbjct: 120 NRARLLSRHSQWQHLYQLGSGSGSGSSRIDTSYKNHGLAVTPGLENGGYTSFPEAFAGRA 179
Query: 172 LNDEHNTILEQSANTENDGLSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPP 231
++ LE+ +N G G+ + GSIRTK+LSKSGF EFFVK+TLKGKGI+ RG
Sbjct: 180 SRNDCGEELEEMKAVDNKG--GD--AQGSIRTKILSKSGFPEFFVKSTLKGKGIIRRGVQ 235
Query: 232 LNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291
L F V P +A + AG + +AS++S L
Sbjct: 236 LEGFN-----------VEHRNPKNA--RIAGGITLASDSS---------------LQHDV 267
Query: 292 RTGVPASCWIGGLR-QGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGV 350
+ +PA + +GSS G++LREWL K +I+CLYIFR +V LV+ H +GV
Sbjct: 268 KPVIPALYRKSEHKHRGSSLDGISLREWLKVPNQKVNKIKCLYIFRHVVELVERSHGRGV 327
Query: 351 TFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASL-DIPHSENYRLRRRSAEEEMFTTGI 409
DL+PSSF++L +NQV+Y+G IQ +T ES + D S+++ R+R E+ F +
Sbjct: 328 LLHDLRPSSFRILTTNQVRYVGTFIQSKTPESLMVKDGQCSDSHLTRKRPLEQGNFLSFG 387
Query: 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGN 469
S KKQK NM+ S FP K G +ETAN D N+ + + NEH G
Sbjct: 388 GSPKKQKDAQNMSLMARHSYFPFKSGTSLETANTRDCNK----NVSENYNEHFVEQG--G 441
Query: 470 YSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRF 529
++K + ++AQ TS S+ LEE WY SPEEL G C+ SNI+SLGVL FEL G+F
Sbjct: 442 WNKPAGLRAYDSAQ---TSASDLLEESWYVSPEELMTGCCSAKSNIFSLGVLLFELLGKF 498
Query: 530 DSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589
+S+ ALAAAMS+LRDRILPPSFL++N KE GFCLW LHPEP SRPT REIL+SE+ N
Sbjct: 499 ESDGALAAAMSNLRDRILPPSFLADNLKEVGFCLWLLHPEPASRPTAREILESELINGMP 558
Query: 590 EVCAEELLSSIDQDDSESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLK 649
V EL +SID++D+ESELLL FL SL E+KQ QASKLV +IR LE+DI+EV +RH
Sbjct: 559 SVPEPELSTSIDEEDAESELLLQFLTSLNEQKQKQASKLVEDIRYLESDIEEVNKRH--- 615
Query: 650 KPLVDPSLQNESAPSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLNQLERAYFSMRSQ 709
RY N + Q+ IS NE R+ +N++QLE AYFSMRS+
Sbjct: 616 ------------------RYLNSDMC---PQVYRISHTNEERIAKNISQLEGAYFSMRSK 654
Query: 710 IQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGM 769
+ S++DS R DNDLLR REN +L Q+D E+ + +DRLGAFFDG CKY+RYSKFEV+G+
Sbjct: 655 VDPSENDSAIRTDNDLLRARENCYLPQKDDEMSH-SDRLGAFFDGFCKYSRYSKFEVRGV 713
Query: 770 LRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRS 829
LR G+FN+S+NVICS+SFDRDE++FAAAGVSKKI+IFEFN++F+DSVD++YPAVEM NRS
Sbjct: 714 LRNGDFNSSSNVICSLSFDRDEEYFAAAGVSKKIRIFEFNSVFSDSVDIHYPAVEMFNRS 773
Query: 830 KLSCVCWNNYIKNYLASADYDGVVKV 855
KLSC+CWN YIKNYLAS DYDGVVK+
Sbjct: 774 KLSCICWNGYIKNYLASTDYDGVVKL 799
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356495711|ref|XP_003516717.1| PREDICTED: protein SPA1-RELATED 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/923 (46%), Positives = 571/923 (61%), Gaps = 102/923 (11%)
Query: 4 MDEG-VGEVAPVNAAEGAPLQNKEIEYSLRPESCNNVLESGEMAIPEGTSSDGSFQI--- 59
MDE V E + AE + QNK+ S PE C +L+S E IP D S QI
Sbjct: 1 MDEDFVDEATQLEVAEESQRQNKD---SPHPE-CRKILKSLEAFIP--VKQDYS-QIPPR 53
Query: 60 -LADMLEGKSVNRIVSPMDASENPCPHSD---SDAGIMVEELTVRKSNSSNLAIVGTSNH 115
+L GK+V + D S++P H DA +MVEELTV+ N S+L I GTSN+
Sbjct: 54 EYDGILHGKNVVEGIDHADTSQHP--HVSLFMDDADVMVEELTVKSYNGSSLDI-GTSNN 110
Query: 116 RERISTRHDRWQHLYQLGSGSGSGSSRGDRGHGRTMLG---AWEDVGDTSLHDFITQKPL 172
RE+I R + WQ+LYQL S SG G+S D G ++ A ED+G +S + + +K L
Sbjct: 111 REQIYNRQNHWQNLYQLASNSGIGNSLSDIGTRNSVPATSSAREDIGSSSFPEMLARKSL 170
Query: 173 NDEHNTILEQSANTENDGLSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPPL 232
+D + ++E A+ EN +G++ R K++S+SGF+EFF+K TL+GKGIV +GP
Sbjct: 171 SDGQSNVMEHLASAENKEGAGDV--RQGTRKKIISQSGFAEFFIKNTLRGKGIVYKGPSS 228
Query: 233 NAF-------------------KERRGMIDTKAFVTTTMPSD----------------AA 257
+ F + + G+ + + T + +D
Sbjct: 229 DGFCVQSREQNWMKIGIDADQNRMKTGIGADQNRLKTVIDADQNQLKTGIDADQNRLKTG 288
Query: 258 LKAAGAMMVASNASPK--------------PVGVGTAVVSNGSLDLGARTG-VPASCWIG 302
+ A M AS + + G+ T + SN S+ G++T P+ C G
Sbjct: 289 IDADQNQMKASIGTDQNQMKNHSGTDQKQMKTGIVTHLNSNQSVGYGSKTAKFPSYC--G 346
Query: 303 GL-RQGSSDH-GVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSF 360
+ R G SD GV LREWL HK ++E L IFR+IV LVD H+QGV +L PS
Sbjct: 347 AMPRSGRSDCVGVTLREWLKHGHHKASKVESLNIFRKIVDLVDICHSQGVALHNLCPSYI 406
Query: 361 KLLQSNQVKYIGPIIQKETLESA-SLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419
KL SNQ+ Y+G +QK+ ++S + ++ H +N +R+R +E+ F + +KK+KFN
Sbjct: 407 KLSPSNQIMYLGLPVQKQMVDSVVNSEVVHLDNSFIRKRLSEQVTFPSLDMGSKKKKFNE 466
Query: 420 NMNFSRWWSLFPSKYGNKI--ETANESDINEVSIPHSHNDTNEHHTNAGFGNYS---KSS 474
N+ + G + ETA++ ++ ++ S + NE+ F Y+ SS
Sbjct: 467 NVRVT----------GGDLCLETASDRKLHSHTVG-SQDYYNEYEEGTQFSKYNIGRMSS 515
Query: 475 SPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA 534
P VSN Q TS E+ E KWY SPE GG TTSSNIY LGVL FEL G FDSER
Sbjct: 516 IPRVSNAGQMPLTSC-EKFENKWYTSPE---GGY-TTSSNIYCLGVLLFELLGHFDSERT 570
Query: 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAE 594
AAMSDLR RILPP FLSENPKEAGFCLW LHPEP SRP+TREILQSE+ N QE+ +E
Sbjct: 571 HIAAMSDLRHRILPPIFLSENPKEAGFCLWLLHPEPSSRPSTREILQSELINGLQELFSE 630
Query: 595 ELLSSIDQDDSESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKPLVD 654
EL SSIDQ+D+ESELLLHFL+ L+E+KQN A KLV EI+ LE+DI+EVERRH +K LV
Sbjct: 631 ELSSSIDQEDAESELLLHFLVLLKEQKQNNAFKLVEEIKCLESDIEEVERRHDSRKSLVS 690
Query: 655 PSLQNESAPSRENRYFNEQLSSSEA--QLSPISDANEMRLMRNLNQLERAYFSMRSQIQL 712
LQN+ + +E ++ S E +SPIS++N++RLMR++ LE AYFS RS++QL
Sbjct: 691 SGLQNDYSCQKEIMPLKKESLSLEMLPSISPISNSNKVRLMRSICHLEGAYFSTRSKLQL 750
Query: 713 SDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRT 772
S++D++T D D+LR+REN +AQ+ +E Q D LG FFDGLCKYARY KFEV+G+LR
Sbjct: 751 SETDASTHPDKDILRNRENQNVAQKSEE-QPKKDTLGVFFDGLCKYARYCKFEVRGVLRN 809
Query: 773 GEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLS 832
+FNN ANVICS+SFDRD D+FA+AG+S+KIKIFEF+AL NDSVD++YPAVEMSNRSKLS
Sbjct: 810 VDFNNPANVICSLSFDRDADYFASAGISRKIKIFEFSALCNDSVDIHYPAVEMSNRSKLS 869
Query: 833 CVCWNNYIKNYLASADYDGVVKV 855
CVCWNNYIKNYLAS DYDG+VK+
Sbjct: 870 CVCWNNYIKNYLASTDYDGIVKL 892
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356540404|ref|XP_003538679.1| PREDICTED: protein SPA1-RELATED 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/913 (46%), Positives = 562/913 (61%), Gaps = 108/913 (11%)
Query: 4 MDEG-VGEVAPVNAAEGAPLQNKEIEYSLRPESCNNVLESGEMAIPEGTSSDGSFQILAD 62
MDE V E + AE QNK+ S PE C +L+S E IP D S QI
Sbjct: 1 MDEELVDEATQLEVAEETQRQNKD---SSNPE-CQKILKSQEAFIP--VKQDYS-QIPPR 53
Query: 63 MLEGKSVNRIVSPMDASENP-CPHSDSDAGIMVEELTVRKSNSSNLAIVGTSNHRERIST 121
+GK+V + D S++P DA M+EELTV+ N S+L I GTSN+RE++
Sbjct: 54 EYDGKNVVEGIDHADTSQHPRVSLFMDDADAMIEELTVKSYNGSSLDI-GTSNNREQMYN 112
Query: 122 RHDRWQHLYQLGSGSGSGSSRGDRGHGRTMLG---AWEDVGDTSLHDFITQKPLNDEHNT 178
+ + WQ+LYQL S SG G+S D G ++ A ED+G +S + + +K L+D +
Sbjct: 113 QQNHWQNLYQLASNSGIGNSLSDIGTRNSVQATSSAREDIGSSSFPEMLARKSLSDGQSN 172
Query: 179 ILEQSANTENDGLSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAF--- 235
+E A+ EN G +G++ H RTK++S+SGF+EFF+K TL+GKGIV RGP + F
Sbjct: 173 AMEHLASAENKGGAGDV--HQGTRTKIISQSGFAEFFIKNTLRGKGIVYRGPSSDGFCVQ 230
Query: 236 -KERRGM-----IDTKAFVTTTMPSDAALKAAGAMM-------VASNASPKPVGV----- 277
+E+ M D T +K ++ + ++ +P G+
Sbjct: 231 SREQNRMKIGIDADQNRMKTGIGADQNRMKTVIDVIQNRLKTGIDADQNPMKTGIDQSRM 290
Query: 278 --------------------------GTAVVSNGSLDLGARTG-VPASCWIGGL-RQGSS 309
GT + SN S+ G++T P+ C G + R G S
Sbjct: 291 KTGIDTDQNQMKTGIGTDQKQMKTSIGTHLNSNQSVGYGSKTAKFPSYC--GAMPRSGRS 348
Query: 310 D-HGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368
+ GV LREWL HK ++E L IFR+IV LV H+QGV +L PS KL SNQV
Sbjct: 349 ECDGVTLREWLKHGNHKANKVESLNIFRKIVDLVGNSHSQGVALHNLCPSYIKLTPSNQV 408
Query: 369 KYIGPIIQKETLES-ASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427
Y+G +QK+ ++S + ++ H +N +R+R +E+ + +KKQKFN N+ +
Sbjct: 409 MYLGLPVQKQMVDSVVNSEVVHLDNSFIRKRLSEQVTLPSLDMGSKKQKFNENVRVT--- 465
Query: 428 SLFPSKYGNK--IETANESDINEVSIPHSHNDTNEHHTNAGFGNYS---KSSSPLVSNTA 482
G +ETA++ ++ ++ S + NE+ F Y+ SS P VSN
Sbjct: 466 -------GGDLCLETASDRKLHSHTVG-SQDYYNEYEEGTQFSKYNIGRMSSIPRVSNAG 517
Query: 483 QQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDL 542
Q+ TS E+ E KWY SPE GG TTSSNIY LGVL FEL G FDSER AAMSDL
Sbjct: 518 QRPLTSC-EKFENKWYTSPE---GGY-TTSSNIYCLGVLLFELLGHFDSERTHIAAMSDL 572
Query: 543 RDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLSSIDQ 602
R RILPP FLSENPKEAGFCLW LHPEP SRP+TREILQSE+ N QE+ +EEL SSIDQ
Sbjct: 573 RHRILPPIFLSENPKEAGFCLWLLHPEPSSRPSTREILQSELINGLQELFSEELSSSIDQ 632
Query: 603 DDSESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKPLVDPSLQNESA 662
+D+ESELLLHFL+ L+E+KQN A KLV +I+ LE+DI+EV+RRH +K L SL E
Sbjct: 633 EDAESELLLHFLVLLKEQKQNNAFKLVEDIKCLESDIEEVDRRHDSRKSL--ESLSLEML 690
Query: 663 PSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLNQLERAYFSMRSQIQLSDSDSTTRAD 722
PS +SPIS++NE+RLMRN+ LE AYFSMRS++QLS++D++T D
Sbjct: 691 PS----------------ISPISNSNEVRLMRNICHLESAYFSMRSKLQLSETDASTHPD 734
Query: 723 NDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVI 782
D+LR+REN +A++ +E Q D LGAFFDGLCKYARY KFEV+G+LR +FNN ANVI
Sbjct: 735 KDILRNRENWNVAEKSEE-QPKKDTLGAFFDGLCKYARYCKFEVRGVLRNADFNNPANVI 793
Query: 783 CSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKN 842
CS+SFDRD D+FA+AG+SKKIKIFEF+AL NDSVD++YPAVEMSNRSKLSCVCWNNYIKN
Sbjct: 794 CSLSFDRDADYFASAGISKKIKIFEFSALCNDSVDIHYPAVEMSNRSKLSCVCWNNYIKN 853
Query: 843 YLASADYDGVVKV 855
YLAS DYDG+VK+
Sbjct: 854 YLASTDYDGIVKL 866
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356527668|ref|XP_003532430.1| PREDICTED: protein SPA1-RELATED 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/855 (45%), Positives = 512/855 (59%), Gaps = 97/855 (11%)
Query: 14 VNAAEGAPLQNKEIEYSLRPESCNNVLESGEMAIPEGTSSDGSFQILADMLEGKSVNRIV 73
+ EG Q K+ +SL PE P+ + + + + K+V
Sbjct: 5 LEVGEGVQHQTKDDGFSLNPE------------FPKILKPQEIYTSYSHISQDKNV---- 48
Query: 74 SPMDASENPCPHSDSD-AGIMVEELTVRKSNSSNLAIVGTSNHRERISTRHDRWQHLYQL 132
++A E+ P SD AG MVEELTV+ N S L I GT N+ + +W+H+YQ
Sbjct: 49 --VEAREHLHPSLFSDGAGAMVEELTVKSYNGSRLHI-GTLNNPGPLHNSRSQWRHIYQP 105
Query: 133 GSGSGSGS-SRGDRGHGRTMLGAWEDVGDTSLHDFITQKPLNDEHNTILEQ-------SA 184
SG GS R AWED+G TS D + +KP+NDE +++ +
Sbjct: 106 VGDSGMGSDCIIARKSVEATSSAWEDIGSTSFRDMLDRKPVNDEQGHVMQHLSTDVHTAE 165
Query: 185 NTENDGLSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDT 244
+ E++G + H I+TK++ KSGF+E+ ++TLKGKG+VC+GP N
Sbjct: 166 HKEDEGHA-----HEGIQTKVIHKSGFAEYSGRSTLKGKGVVCKGPSSN----------- 209
Query: 245 KAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGL 304
G + + + +P G+ T + SN G +T G
Sbjct: 210 -----------------GLYIESRDQNPIKSGIDTQMDSNALPSSGLKTAKSPHNATGPG 252
Query: 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364
GS GV LREWL +R HK + + L IFR+IV LVD H +GV +L PS KLL
Sbjct: 253 SGGSDTDGVTLREWLKSRHHKRSKTDHLSIFRKIVDLVDGSHFEGVAMRNLYPSYIKLLP 312
Query: 365 SNQVKYIGPIIQKETLES-ASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423
SNQV Y+G QK+TL+S A+ ++ +N +R+R +E + + KKQKFN N
Sbjct: 313 SNQVMYLGLPAQKQTLDSVANSEVLQLDNSFIRKRLSETVISPSLNLQLKKQKFNENARV 372
Query: 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYS---KSSSPLVSN 480
+ WS P + ++ AN+ +N V S + NE+ + F ++ S P +S+
Sbjct: 373 AGDWSQCPPRTDLYLQIANDIKVNAVG---SQDYYNEYKEDIQFSKHNIGRMSRIPHISS 429
Query: 481 TAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMS 540
Q Q TS++E LE+KWYASPE G CTTSSNIY LGVL FEL FDSERA AAMS
Sbjct: 430 AGQLQLTSLNEGLEDKWYASPE----GGCTTSSNIYCLGVLLFELLNHFDSERAHIAAMS 485
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLSSI 600
+LR RILP FLSE P EAGFCLW +HPEP SRPT REILQSEV N EV EEL SS+
Sbjct: 486 NLRHRILPSVFLSEYPMEAGFCLWMMHPEPSSRPTLREILQSEVINGIHEVYCEELSSSL 545
Query: 601 DQDDSESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKPLVDPSLQNE 660
+QDD+ESELLLHFLISL+E+K A+KL EIR LE+D+KEVERRH L+K L+
Sbjct: 546 NQDDAESELLLHFLISLKEQKHMDANKLAEEIRCLESDVKEVERRHDLRKSLL------- 598
Query: 661 SAPSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLNQLERAYFSMRSQIQLSDSDSTTR 720
PS+ S IS+ANE+RLM+ + +LE AYFSMRS+I+L ++D+ T
Sbjct: 599 --PSK----------------SIISNANELRLMKIIPRLESAYFSMRSKIKLPETDTATH 640
Query: 721 ADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSAN 780
D D+L + +N AQ+D E TD LGAFFD LCKYARYSKFEV+G+LR +FNN AN
Sbjct: 641 PDKDILINHDNWCGAQKDMEQHKATDALGAFFDSLCKYARYSKFEVRGILRNTDFNNPAN 700
Query: 781 VICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
VICS+SFDRDED+FAAAG+SKKIKIFEFNALFNDS+D++YP VEMSNRS+LSCVCWNNYI
Sbjct: 701 VICSLSFDRDEDYFAAAGISKKIKIFEFNALFNDSIDIHYPVVEMSNRSRLSCVCWNNYI 760
Query: 841 KNYLASADYDGVVKV 855
+NYLAS DYDG VK+
Sbjct: 761 QNYLASTDYDGAVKL 775
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357481459|ref|XP_003611015.1| Histone acetyltransferase type B subunit [Medicago truncatula] gi|355512350|gb|AES93973.1| Histone acetyltransferase type B subunit [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 640 bits (1650), Expect = e-180, Method: Compositional matrix adjust.
Identities = 385/795 (48%), Positives = 489/795 (61%), Gaps = 81/795 (10%)
Query: 94 VEELTVRKSNSSNLAIVGTSNHRERISTRHDRWQHLYQLGSGSGSGSSRGDRG----HGR 149
VEELTV+ N + I GTS + +H WQ+LYQ+G+ SG+ +S D G
Sbjct: 51 VEELTVKSYNGFSFDI-GTSTTQ----VQHKHWQNLYQIGNNSGNVNSISDIGLINSGPA 105
Query: 150 TMLGAWEDVGDTSLHDFITQKPLNDEHNTILEQSANTEND---GLSGNMLSHGSIRTKML 206
AWEDVG TS + + +K +D + ++E A E+ G +G++ IRTKM+
Sbjct: 106 ATSSAWEDVGSTSFPELLARKSHSDGQSNVVEHLAAAESKEGVGPAGDV--RRGIRTKMI 163
Query: 207 SKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDA----ALKAAG 262
SKSGF+E+F+K TLK KG+V +GP + R + + T DA G
Sbjct: 164 SKSGFAEYFIKNTLKSKGVVRKGPASD-----RVYVQPREQNQTKTGGDANQNWGKIGVG 218
Query: 263 A----MMVASNASPKPVGVGTAVVSNG--SLDLGARTG---------VPASCWIGGLRQG 307
A M + + K + GT SN S++ G++T VP S
Sbjct: 219 AYKNQMKTSIDTEQKQIKTGTGAQSNCNVSVNRGSKTAKFPIHSDAAVPKS-------SM 271
Query: 308 SSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367
+ GV LREWL + K ++E L IFR+IV LVD H++G +L PS K L SNQ
Sbjct: 272 TECDGVTLREWLKSGQRKSGKVESLNIFRKIVDLVDDSHSRGFALHNLCPSYIKFLPSNQ 331
Query: 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427
V YIG QK+T +R +E+ + + S KKQKF+ + +
Sbjct: 332 VMYIGLPTQKQTAG---------------KRVSEQVTSSVDMGS-KKQKFDESGRVTGS- 374
Query: 428 SLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYS---KSSSPLVSNTAQQ 484
L P ETAN ++ S+ S + N + + F Y+ SS P VSN+ Q
Sbjct: 375 DLCP-------ETANHHEVQTPSV-GSQDYRNGYEEDNQFSVYNFGRMSSIPRVSNSGQL 426
Query: 485 QST--SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDL 542
ST S+ E+ E KWYASPE G CTTSSNIY LGVL FEL G FDSERA AAMSDL
Sbjct: 427 SSTCNSLCERWENKWYASPE----GGCTTSSNIYCLGVLLFELLGHFDSERAHIAAMSDL 482
Query: 543 RDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLSSIDQ 602
RILPP+FLSENPKEAGFCLW LHPEP SRPTT EILQSEV N QE+C EEL S IDQ
Sbjct: 483 HHRILPPAFLSENPKEAGFCLWLLHPEPSSRPTTGEILQSEVINGLQELCNEELSSCIDQ 542
Query: 603 DDSESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKPLVDPSLQNESA 662
+D+ESELLLHFLIS +E+KQ ASKLV ++ LE+DI E ERRH L+K LV QN +
Sbjct: 543 EDAESELLLHFLISSKEQKQGDASKLVEQLECLESDIGEAERRHGLRKSLVSSGWQNNYS 602
Query: 663 PSRENRYFNEQLSSSE--AQLSPISDANEMRLMRNLNQLERAYFSMRSQIQLSDSDSTTR 720
+ ++ S E +SPIS+ NE+RLM+N+ LE AYFSMRS++Q+S++D+T
Sbjct: 603 CQKVISPLQKEFLSVERPPTVSPISNTNELRLMKNIGHLESAYFSMRSKVQISETDATDH 662
Query: 721 ADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSAN 780
D D+LR REN + Q+ +E N D LG FFDGLCKYARYSK EV+G+LR +FNN AN
Sbjct: 663 PDKDILRTRENWSVTQKGEEQHNSKDALGTFFDGLCKYARYSKLEVRGILRNADFNNPAN 722
Query: 781 VICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
VICS+SFDRDED+FA+AG+SKKIKIF+FN L NDSVD++YPAVEMSNRSKLSCVCWN+YI
Sbjct: 723 VICSLSFDRDEDYFASAGISKKIKIFDFNTLCNDSVDIHYPAVEMSNRSKLSCVCWNSYI 782
Query: 841 KNYLASADYDGVVKV 855
KNYLAS DYDGVVK+
Sbjct: 783 KNYLASTDYDGVVKL 797
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297809331|ref|XP_002872549.1| hypothetical protein ARALYDRAFT_911432 [Arabidopsis lyrata subsp. lyrata] gi|297318386|gb|EFH48808.1| hypothetical protein ARALYDRAFT_911432 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 377/861 (43%), Positives = 506/861 (58%), Gaps = 76/861 (8%)
Query: 4 MDEG-VGEVAPVNAAEGAPLQNKEIEYSLRPESCNNVLESGEMAIPEGTSSDGSFQILAD 62
MDEG VG+V+ ++ A+ A LQ K E S +PE+C A E S D S+ ++A+
Sbjct: 2 MDEGSVGDVSRIDEADVAHLQFKNSEQSFKPENCEVREVKDVQAQKEAGSPDCSYGVIAE 61
Query: 63 MLEGKSVNRIVSPMDASEN-PCPHSDSDAGIMVEELTVRKSNSSNLAIVGTSNHRERIST 121
L+GK+ + P++ N PC S +AG +VEELTV+ S++AIVG + R R+
Sbjct: 62 FLDGKNGD----PVEQIGNEPC-SSRQNAGDVVEELTVKTCEGSSMAIVGRPSSRARLEM 116
Query: 122 RHDRWQHLYQLGSGSGSGSSRGDRGHGRTMLGAWEDVGDTSLHDFITQK----PLNDEHN 177
++ H + L SS + + R +G + G SL + T + +N E N
Sbjct: 117 NRSQFLHRFPLDGDLPGSSSMSKKENNRETIGILRNAGKMSLPETSTGQLAIVSVNGEAN 176
Query: 178 TILEQSANTENDGLSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKE 237
+L+ N E + + LSH I+TKMLS+SGFS+FFV+ TLKGKG+ RGPP N K
Sbjct: 177 ELLK---NVERNTVPVEALSHEGIKTKMLSQSGFSQFFVRKTLKGKGVTFRGPPQNISKA 233
Query: 238 RRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297
T A ++G+ +V SN K +G L + P+
Sbjct: 234 SNMDQQTVA-------------SSGSPLVISNTPAKISSSIPLAAYDGLPCLPSNASKPS 280
Query: 298 SCW-IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLK 356
SC + +G G++LREWL + + + EC+YIFRQIV VD H+QGV DL+
Sbjct: 281 SCGSPSDIHRGCGGEGLSLREWLKSERQEVNKAECMYIFRQIVDHVDCSHSQGVVLCDLR 340
Query: 357 PSSFKLLQSNQVKYIGPIIQKETLESA--SLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414
PSSFK+ + N +KY+G Q+E+ S + EN +RRR + ++ AKK
Sbjct: 341 PSSFKIFKENAIKYVGSGSQRESFYSNMNKETLSQLENPLVRRRLGDT---SSPSIPAKK 397
Query: 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSS 474
QK SR W +F G I+T N + +I H +++ H
Sbjct: 398 QKSGGPS--SRQWPMFQRAGGVNIQTEN----GDGAIHEFHYRSSQPH------------ 439
Query: 475 SPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA 534
+TA + TSVSEQLEEKWYASPEEL G + + SSNIYSLG+L +EL +F ERA
Sbjct: 440 ----GSTAARPFTSVSEQLEEKWYASPEELRGDMRSASSNIYSLGILLYELLSQFQCERA 495
Query: 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAE 594
AAMSD+R RILPP FLSENPKEAGFCLW LHPE RP+TR+ILQSEV N ++ AE
Sbjct: 496 REAAMSDIRHRILPPKFLSENPKEAGFCLWLLHPESSCRPSTRDILQSEVVNGIPDLYAE 555
Query: 595 ELLSSIDQDDSESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKPLVD 654
L SI+Q+D+ESELL HFLI +E++Q A+KL+ EI S+EADI+E+ +R P
Sbjct: 556 GLSLSIEQEDTESELLQHFLILSQEKRQKHAAKLMEEIASVEADIEEIVKRRCAIGP--- 612
Query: 655 PSLQNESAPSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLNQLERAYFSMRSQIQLSD 714
+ SP S EMRL+RN+NQLE YF+ R L +
Sbjct: 613 ------------------LSLEEASSSSPASSVPEMRLIRNINQLESTYFAARIDAHLPE 654
Query: 715 SDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGE 774
+ R D DLLR+R+N ++ E + DR+GAFFDGLCKYARYSKFE +G+LRT E
Sbjct: 655 ARYRLRPDRDLLRNRDNTVAEVENSETWSSDDRVGAFFDGLCKYARYSKFETRGVLRTSE 714
Query: 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCV 834
N+++NVICS+ FDRDED+F AGVSKKIKI+EFN+LFN+SVD++YPAVEM NRSKLS V
Sbjct: 715 LNSTSNVICSLGFDRDEDYFVTAGVSKKIKIYEFNSLFNESVDIHYPAVEMPNRSKLSGV 774
Query: 835 CWNNYIKNYLASADYDGVVKV 855
CWNNYI+NYLAS+DYDG+VK+
Sbjct: 775 CWNNYIRNYLASSDYDGIVKL 795
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145340093|ref|NP_192849.4| protein SPA1-related 2 [Arabidopsis thaliana] gi|223635833|sp|Q9T014.2|SPA2_ARATH RecName: Full=Protein SPA1-RELATED 2 gi|332657574|gb|AEE82974.1| protein SPA1-related 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 380/863 (44%), Positives = 505/863 (58%), Gaps = 76/863 (8%)
Query: 4 MDEG-VGEVAPVNAAEGAPLQNKEIEYSLRPESCNNVLESGEMAIP-EGTSSDGSFQILA 61
MDEG VG+V+ ++ A+ A LQ K E S +PE+ V E E+ + E S D S+ ++A
Sbjct: 2 MDEGSVGDVSRIDEADVAHLQFKNSEQSFKPENIE-VREVKEVQVQREAGSPDCSYGVIA 60
Query: 62 DMLEGKSVNRIVSPMDASENPCP--HSDSDAGIMVEELTVRKSNSSNLAIVGTSNHRERI 119
D L+GK+ V + PC + +D G +VEELTV+ S++AIVG + R R+
Sbjct: 61 DFLDGKNGGDHVELI--GNEPCSSRQNTNDEGDVVEELTVKTCEGSSMAIVGRPSSRARL 118
Query: 120 STRHDRWQHLYQLGSGSGSGSSRGDRGHGRTMLGAWEDVGDTSLHDF----ITQKPLNDE 175
++ H + L SS + R + + G SL + + +N E
Sbjct: 119 EMNRSQFLHRFPLDGDLPGSSSMSKKVIDRGTVSILRNAGKMSLPETSNGQLAIIAVNGE 178
Query: 176 HNTILEQSANTENDGLSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAF 235
N E N E + + LSH I+TKMLS+SGFS+FFV+ TLKGKG+ RGPP N
Sbjct: 179 AN---EHLTNVERNPVPVEALSHEGIKTKMLSQSGFSQFFVRKTLKGKGVTFRGPPNNRS 235
Query: 236 KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295
K R T A ++G+ +V +N S K +G L + T
Sbjct: 236 KARNMDQQTVA-------------SSGSALVIANTSAKISSSIPLAAYDGLPCLPSNTSK 282
Query: 296 PASCW-IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLD 354
P+SC +G G++LREWL + + + EC+YIFRQIV VD H+QGV D
Sbjct: 283 PSSCANPSDTHRGCGGEGLSLREWLKSERQEVNKAECMYIFRQIVDHVDCSHSQGVVLCD 342
Query: 355 LKPSSFKLLQSNQVKYIGPIIQKETLESA--SLDIPHSENYRLRRRSAEEEMFTTGIASA 412
L+PSSFK+ + N VKY+ Q+E+ +S + EN +RRR + + A
Sbjct: 343 LRPSSFKIFKENAVKYVVSGSQRESFDSNMNKETLSQLENPLVRRRLGDTSSLSI---PA 399
Query: 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSK 472
KKQK + SR W +F G I+T N N+ +I H +++ H S
Sbjct: 400 KKQKSSGPS--SRQWPMFQRAGGVNIQTEN----NDGAIQEFHFRSSQPHC-------ST 446
Query: 473 SSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSE 532
+ P TSVSEQLEEKWYASPEEL G + + SSNIYSLG+L +EL +F E
Sbjct: 447 VACPF---------TSVSEQLEEKWYASPEELRGDMRSASSNIYSLGILLYELLSQFQCE 497
Query: 533 RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592
RA AAMSD+R RILPP FLSENPKEAGFCLW LHPE RP+TR+ILQSEV N ++
Sbjct: 498 RAREAAMSDIRHRILPPKFLSENPKEAGFCLWLLHPESSCRPSTRDILQSEVVNGIPDLY 557
Query: 593 AEELLSSIDQDDSESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKPL 652
AE L SI+Q+D+ESELL HFL +E++Q A L+ EI S+EADI+E+ +R P
Sbjct: 558 AEGLSLSIEQEDTESELLQHFLFLSQEKRQKHAGNLMEEIASVEADIEEIVKRRCAIGP- 616
Query: 653 VDPSLQNESAPSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLNQLERAYFSMRSQIQL 712
PSL+ S+ S S EMRL+RN+NQLE AYF+ R L
Sbjct: 617 --PSLEEASSSSPA------------------SSVPEMRLIRNINQLESAYFAARIDAHL 656
Query: 713 SDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRT 772
++ R D DLLR+ +N ++ E + DR+GAFFDGLCKYARYSKFE +G+LRT
Sbjct: 657 PEARYRLRPDRDLLRNSDNTVAEVENSETWSSDDRVGAFFDGLCKYARYSKFETRGVLRT 716
Query: 773 GEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLS 832
E NN++NVICS+ FDRDED+FA AGVSKKIKI+EFN+LFN+SVD++YPA+EM NRSKLS
Sbjct: 717 SELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLS 776
Query: 833 CVCWNNYIKNYLASADYDGVVKV 855
VCWNNYI+NYLAS+DYDG+VK+
Sbjct: 777 GVCWNNYIRNYLASSDYDGIVKL 799
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 874 | ||||||
| TAIR|locus:2039139 | 1029 | SPA1 "SUPPRESSOR OF PHYA-105 1 | 0.425 | 0.361 | 0.531 | 8.2e-118 | |
| TAIR|locus:2136133 | 1036 | SPA2 "SPA1-related 2" [Arabido | 0.273 | 0.230 | 0.510 | 3.5e-108 | |
| TAIR|locus:2037005 | 794 | SPA4 "SPA1-related 4" [Arabido | 0.299 | 0.329 | 0.336 | 1.2e-36 | |
| TAIR|locus:2059359 | 675 | COP1 "CONSTITUTIVE PHOTOMORPHO | 0.194 | 0.251 | 0.374 | 1.4e-24 | |
| DICTYBASE|DDB_G0288453 | 970 | DDB_G0288453 "E3 ubiquitin-pro | 0.204 | 0.184 | 0.358 | 8.7e-24 | |
| ZFIN|ZDB-GENE-070410-134 | 694 | rfwd2 "ring finger and WD repe | 0.314 | 0.396 | 0.303 | 1.3e-23 | |
| UNIPROTKB|F1NQ64 | 717 | RFWD2 "Uncharacterized protein | 0.312 | 0.380 | 0.285 | 9.9e-22 | |
| UNIPROTKB|Q8NHY2 | 731 | RFWD2 "E3 ubiquitin-protein li | 0.308 | 0.369 | 0.286 | 1.3e-21 | |
| MGI|MGI:1347046 | 733 | Rfwd2 "ring finger and WD repe | 0.308 | 0.368 | 0.286 | 1.7e-21 | |
| UNIPROTKB|E2RRJ5 | 733 | RFWD2 "Uncharacterized protein | 0.308 | 0.368 | 0.286 | 2.2e-21 |
| TAIR|locus:2039139 SPA1 "SUPPRESSOR OF PHYA-105 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 945 (337.7 bits), Expect = 8.2e-118, Sum P(3) = 8.2e-118
Identities = 208/391 (53%), Positives = 268/391 (68%)
Query: 469 NYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528
+Y K+ S VS+ +++QS +S LEE+WY PEE++G SNIY+LGVL FEL
Sbjct: 417 DYIKNLS--VSSVSRKQS--MSTWLEEQWYTCPEEINGEDIGEKSNIYALGVLLFELLCH 472
Query: 529 FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588
+S AA M+DLR RILPP+FLS+ PKEAGFCLW LHPEP SRP+ R+IL+SE+
Sbjct: 473 CESGEMHAAMMADLRHRILPPTFLSKYPKEAGFCLWLLHPEPSSRPSARDILKSEL---- 528
Query: 589 QEVCAEELLSSIDQDDSESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYL 648
+C ++ + S + SELLLHFL SLE +K+ +ASKL+ +I++LE DIKE ERR+
Sbjct: 529 --ICEDDSVKSTAAAEEISELLLHFLSSLEVQKKKKASKLLQDIQTLEDDIKEAERRYSS 586
Query: 649 KKPLVDPSLQNESAPSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLNQLERAYFSMRS 708
LV E ++ +E ++S A P AN RLM N+ QLE AYF MRS
Sbjct: 587 NVSLVRSHGAIEKRV--QSSPLDEHCTTSSALFVPT--ANTDRLMSNIRQLEDAYFFMRS 642
Query: 709 QIQLSDSDSTTRADNDLL-RDR--ENLFLAQQDQEIQNPT-DRLGAFFDGLCKYARYSKF 764
QI LS S +T R+D L RDR EN QD + + D+L FF+GLCK+ARYSKF
Sbjct: 643 QINLSSSAATARSDKTLKDRDRCSENQN-ENQDMSTKGKSSDQLEVFFEGLCKFARYSKF 701
Query: 765 EVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE 824
E G +R+G+ NSA+V+CS+SFD DE+H AAAG+SKKIKIF+FNA N+SV V+YP VE
Sbjct: 702 ETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVE 761
Query: 825 MSNRSKLSCVCWNNYIKNYLASADYDGVVKV 855
M N+SKLSCVCWN+YIKNYLAS DYDGVV++
Sbjct: 762 MVNKSKLSCVCWNSYIKNYLASTDYDGVVQI 792
|
|
| TAIR|locus:2136133 SPA2 "SPA1-related 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 613 (220.8 bits), Expect = 3.5e-108, Sum P(2) = 3.5e-108
Identities = 123/241 (51%), Positives = 162/241 (67%)
Query: 615 ISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKPLVDPSLQNESAPSRENRYFNEQL 674
+SL E+++ S+L+ L + K + L + + E R L
Sbjct: 561 LSLSIEQEDTESELLQHFLFLSQE-KRQKHAGNLMEEIASVEADIEEIVKRRCAIGPPSL 619
Query: 675 SSSEAQLSPISDANEMRLMRNLNQLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFL 734
+ + SP S EMRL+RN+NQLE AYF+ R L ++ R D DLLR+ +N
Sbjct: 620 EEASSS-SPASSVPEMRLIRNINQLESAYFAARIDAHLPEARYRLRPDRDLLRNSDNTVA 678
Query: 735 AQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHF 794
++ E + DR+GAFFDGLCKYARYSKFE +G+LRT E NN++NVICS+ FDRDED+F
Sbjct: 679 EVENSETWSSDDRVGAFFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYF 738
Query: 795 AAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854
A AGVSKKIKI+EFN+LFN+SVD++YPA+EM NRSKLS VCWNNYI+NYLAS+DYDG+VK
Sbjct: 739 ATAGVSKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIVK 798
Query: 855 V 855
+
Sbjct: 799 L 799
|
|
| TAIR|locus:2037005 SPA4 "SPA1-related 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 357 (130.7 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 94/279 (33%), Positives = 156/279 (55%)
Query: 587 EFQEVCAEELLSSIDQDDSESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKE-VERR 645
E QE+ E L I Q E+ L ISL +Q K ++ D++ + R
Sbjct: 289 EEQELLLE-FLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQQKGRDVRSFLASR 347
Query: 646 HYLKKPLVDPSLQNESAPSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLNQLERAYFS 705
+++ + + E+ ++ +E+ + S + +++ RLMRNL +LE YF+
Sbjct: 348 KRIRQGAETTAAEEEN----DDNSIDEESKLDDTLESTLLESS--RLMRNLKKLESVYFA 401
Query: 706 MR-SQIQLSDSDST--TRADNDLL---RDRENLFLAQQDQEIQNPTDRLG---AFFDGLC 756
R QI+ + + R + L R E ++Q ++ N + + G F +GLC
Sbjct: 402 TRYRQIKAATAAEKPLARYYSALSCNGRSSEKSSMSQPSKDPINDSRQGGWIDPFLEGLC 461
Query: 757 KYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSV 816
KY +SK V+ L+ G+ NS+N++C+I FDRD + FA AGV+KKIKIFE ++ D
Sbjct: 462 KYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGR 521
Query: 817 DVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKV 855
D++YP VE+++RSKLS +CWN+YIK+ +AS++++GVV+V
Sbjct: 522 DIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQV 560
|
|
| TAIR|locus:2059359 COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 300 (110.7 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 70/187 (37%), Positives = 107/187 (57%)
Query: 672 EQLSSSEAQL---SPISDANEMRLMRNLNQLERAYFSMRSQIQLSDSDSTTRADNDLLRD 728
+ LS S++Q S +S A + R+ N L+ Y R Q+ +S D ++R
Sbjct: 275 DALSGSDSQSLNQSTVSMARKKRIHAQFNDLQECYLQKRRQLA-DQPNSKQENDKSVVR- 332
Query: 729 RENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFD 788
RE ++ L F L + RYS+ V +R G+ +SAN++ SI FD
Sbjct: 333 REGY------------SNGLADFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFD 380
Query: 789 RDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASAD 848
RD++ FA AGVS+ IK+F+F+++ N+ D+ P VEMS RSKLSC+ WN + KN++AS+D
Sbjct: 381 RDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHEKNHIASSD 440
Query: 849 YDGVVKV 855
Y+G+V V
Sbjct: 441 YEGIVTV 447
|
|
| DICTYBASE|DDB_G0288453 DDB_G0288453 "E3 ubiquitin-protein ligase RFWD2" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 8.7e-24, Sum P(2) = 8.7e-24
Identities = 67/187 (35%), Positives = 110/187 (58%)
Query: 669 YFNEQLSSSEAQLSPISDANEMRLMRNLNQLERAYFSMRSQIQLSDSDSTTRADNDLLRD 728
YF+ S + IS+ N N N L+ S + +S+S + +N+ +
Sbjct: 564 YFSAYNESDYDSPTIISETNH----NNNNILKSPNSVNSSSSSIINSNSNSNNNNNTNSN 619
Query: 729 RENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFD 788
NL + E L +F L K+ +Y++F+V L+ G+ N+++++ SI FD
Sbjct: 620 LNNL---NNNIESLKVGKGLLSFSRNLLKFTKYNEFKVLATLKYGDLFNTSSIVSSIEFD 676
Query: 789 RDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASAD 848
RDE++FA AGV+KKIKIFEF+ + D+V+V+ P EM+ RSK+SC+ WN YIK+ +AS+D
Sbjct: 677 RDEEYFATAGVTKKIKIFEFSQI-RDNVEVHSPVKEMTCRSKISCLSWNTYIKSQIASSD 735
Query: 849 YDGVVKV 855
Y+G++ +
Sbjct: 736 YEGIISL 742
|
|
| ZFIN|ZDB-GENE-070410-134 rfwd2 "ring finger and WD repeat domain 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 305 (112.4 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 91/300 (30%), Positives = 144/300 (48%)
Query: 567 HPEPLSRPTTREILQSEVTN-EFQEV--CAEELLSSIDQDDSESE-----LLLHFLISLE 618
HP +++L ++ N + V E LL Q ++ES+ +L+ FL
Sbjct: 171 HPNGTKWQVFQDVLGADQENMDLANVNYILEYLLQKKKQLEAESQAAQRQILMEFLKEAR 230
Query: 619 EEKQNQASKLVGEIRSLEADIKEVERRHYLKKPLVDPSLQNESA-PSRENRYFNEQLSSS 677
K+ Q +L E+ LE DIK VE + P+ D ++S P E + S
Sbjct: 231 RNKREQLEQLQKELNFLEEDIKRVEEMSGMYSPISDMDCNSDSTVPQVE--------APS 282
Query: 678 EAQLSPISDANEMRLMRNLNQLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQ 737
A S I D +E + + S R S S + D E + + +
Sbjct: 283 PAPSSSIIDPSEY-IQPPFGGNSQ---SKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNR 338
Query: 738 DQEIQNPT---DRLGAFFDGLCKYARYSKFEVQGMLR-TGEFNNSANVICSISFDRDEDH 793
I + + ++L F + L K+ RY+ L + N ++++ SI FDRD D+
Sbjct: 339 MSRITDDSRTVNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDY 398
Query: 794 FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853
FA AGV+KKIK+FE+ + D+VD++YP EM+ SK+SC+ W++Y KN LAS+DY+G V
Sbjct: 399 FAIAGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTV 458
|
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| UNIPROTKB|F1NQ64 RFWD2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 288 (106.4 bits), Expect = 9.9e-22, P = 9.9e-22
Identities = 84/294 (28%), Positives = 145/294 (49%)
Query: 564 WQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLS-SIDQDDSESELLLHFLISLEEEKQ 622
WQ+ + L T ++ L N E+ ++ + ++ ++L+ FL K+
Sbjct: 205 WQIIQDLLG--TDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKR 262
Query: 623 NQASKLVGEIRSLEADIKEVERRHYLKKPLV-DPSLQNESAPSRENRYFNEQLSSSEAQL 681
Q ++ E+ LE DIK VE L P+ D ++ APS + + + S+E
Sbjct: 263 EQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSH---SSIIDSTEYSQ 319
Query: 682 SP-ISDANEMRLMRNLNQLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQE 740
P S +++ + N S R ++ T DL + + + + +
Sbjct: 320 PPGFSGSSQAKKQPWYNS---TLASRRKRL--------TAHFEDLEQCYFSTRMTRVSDD 368
Query: 741 IQNPTDRLGAFFDGLCKYARYSKFEVQGMLR-TGEFNNSANVICSISFDRDEDHFAAAGV 799
+ T +L F + L K+ RY+ L + N ++++ SI FDRD D+FA AGV
Sbjct: 369 SRT-TSQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 427
Query: 800 SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853
+KKIK++E+ + D+VD++YP EM+ SK+SC+ W++Y KN LAS+DY+G V
Sbjct: 428 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTV 481
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| UNIPROTKB|Q8NHY2 RFWD2 "E3 ubiquitin-protein ligase RFWD2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 287 (106.1 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 85/297 (28%), Positives = 146/297 (49%)
Query: 564 WQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLS-SIDQDDSESELLLHFLISLEEEKQ 622
WQ+ + L T ++ L N E+ ++ + ++ ++L+ FL K+
Sbjct: 219 WQIFQDWLG--TDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKR 276
Query: 623 NQASKLVGEIRSLEADIKEVERRHYLKKPLV-DPSLQNESAPSRENRYFNEQLSSSEAQL 681
Q ++ E+ LE DIK VE L P+ D ++ APS + + + S+E
Sbjct: 277 EQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSH---SSIIDSTEYSQ 333
Query: 682 SP-ISDANEMRLMRNLNQLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQE 740
P S +++ + N S R ++ T DL E + + +
Sbjct: 334 PPGFSGSSQTKKQPWYNS---TLASRRKRL--------TAHFEDL----EQCYFSTRMSR 378
Query: 741 IQNPT---DRLGAFFDGLCKYARYSKFEVQGMLR-TGEFNNSANVICSISFDRDEDHFAA 796
I + + +L F + L K+ RY+ L + N ++++ SI FDRD D+FA
Sbjct: 379 ISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAI 438
Query: 797 AGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853
AGV+KKIK++E++ + D+VD++YP EM+ SK+SC+ W++Y KN LAS+DY+G V
Sbjct: 439 AGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTV 495
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| MGI|MGI:1347046 Rfwd2 "ring finger and WD repeat domain 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 286 (105.7 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 85/297 (28%), Positives = 144/297 (48%)
Query: 564 WQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLS-SIDQDDSESELLLHFLISLEEEKQ 622
WQ+ + L T ++ L N E+ ++ + ++ ++L+ FL K+
Sbjct: 221 WQIFQDLLG--TDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKR 278
Query: 623 NQASKLVGEIRSLEADIKEVERRHYLKKPLV-DPSLQNESAPSRENRYFNEQLSSSEAQL 681
Q ++ E+ LE DIK VE L P+ D ++ APS + + + S+E
Sbjct: 279 EQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSH---SSIIDSTEYSQ 335
Query: 682 SP-ISDANEMRLMRNLNQLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQE 740
P S ++ + N S R ++ T DL E + + +
Sbjct: 336 PPGFSGTSQTKKQPWYNS---TLASRRKRL--------TAHFEDL----EQCYFSTRMSR 380
Query: 741 IQNPT---DRLGAFFDGLCKYARYSKFEVQGMLR-TGEFNNSANVICSISFDRDEDHFAA 796
I + + +L F + L K+ RY+ L + N ++++ SI FDRD D+FA
Sbjct: 381 ISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAI 440
Query: 797 AGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853
AGV+KKIK++E+ + D+VD++YP EM+ SK+SC+ W++Y KN LAS+DY+G V
Sbjct: 441 AGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTV 497
|
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| UNIPROTKB|E2RRJ5 RFWD2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 285 (105.4 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 85/297 (28%), Positives = 145/297 (48%)
Query: 564 WQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLS-SIDQDDSESELLLHFLISLEEEKQ 622
WQ+ + L T ++ L N E+ ++ + ++ ++L+ FL K+
Sbjct: 221 WQILQDLLG--TDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKR 278
Query: 623 NQASKLVGEIRSLEADIKEVERRHYLKKPLV-DPSLQNESAPSRENRYFNEQLSSSEAQL 681
Q ++ E+ LE DIK VE L P+ D ++ APS + + + S+E
Sbjct: 279 EQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSH---SNIIDSTEYSQ 335
Query: 682 SP-ISDANEMRLMRNLNQLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQE 740
P S +++ + N S R ++ T DL E + + +
Sbjct: 336 PPGFSGSSQTKKQPWYNS---TLASRRKRL--------TAHFEDL----EQCYFSTRMSR 380
Query: 741 IQNPT---DRLGAFFDGLCKYARYSKFEVQGMLR-TGEFNNSANVICSISFDRDEDHFAA 796
I + + +L F + L K+ RY+ L + N ++++ SI FDRD D+FA
Sbjct: 381 ISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAI 440
Query: 797 AGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853
AGV+KKIK++E+ + D+VD++YP EM+ SK+SC+ W++Y KN LAS+DY+G V
Sbjct: 441 AGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTV 497
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00002463001 | SubName- Full=Chromosome chr2 scaffold_132, whole genome shotgun sequence; (1006 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 874 | |||
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 1e-74 | |
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 9e-07 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-06 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-05 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 2e-05 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 8e-04 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 8e-04 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.001 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 0.004 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 260 bits (665), Expect = 1e-74
Identities = 148/385 (38%), Positives = 215/385 (55%), Gaps = 23/385 (5%)
Query: 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFL 552
+E WY SPEE +G +S++Y LGVL FELF S + MS LR R+LPP L
Sbjct: 176 MEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQIL 235
Query: 553 SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLSSIDQDD--SESELL 610
PKEA FCLW LHPEP RP+ E+LQSE NE +E EE ++++ D E ELL
Sbjct: 236 LNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRE-NLEEREAAMELRDRIEEQELL 294
Query: 611 LHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKP--------LVDPSLQNESA 662
L FL +++ KQ A KL I L +DI +V +R + + L + A
Sbjct: 295 LEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQQKGSDVRSFLASRKRIRQGA 354
Query: 663 PSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLNQLERAYFSMR-SQIQLSDSD----- 716
+ N+ SS + RLMRNL +LE YF+ R QI+ + +
Sbjct: 355 ETLAAEEENDDNSSKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAAAAAEKPLA 414
Query: 717 --STTRADNDLLRDRENLFLAQQDQEIQNPTDRLGA----FFDGLCKYARYSKFEVQGML 770
+ ++N ++ ++ + + R G F +GLCKY +SK V+ L
Sbjct: 415 RYYSALSENGRSSEKSSMSNPAKPPDFYINDSRQGGWIDPFLEGLCKYLSFSKLRVKADL 474
Query: 771 RTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSK 830
+ G+ NS+N++C+I FDRD + FA AGV+KKIKIFE ++ D D++YP VE+++RSK
Sbjct: 475 KQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSK 534
Query: 831 LSCVCWNNYIKNYLASADYDGVVKV 855
LS +CWN+YIK+ +AS++++GVV+V
Sbjct: 535 LSGICWNSYIKSQVASSNFEGVVQV 559
|
Length = 793 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 52.4 bits (125), Expect = 9e-07
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 313 VNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIG 372
V+LR+WL+ EC ++FRQIV +V+ H+QG+ +++PS F + N V +I
Sbjct: 64 VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 123
Query: 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417
++ E RR E + KKQ F
Sbjct: 124 SASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPF 168
|
Length = 793 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 1e-06
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELF-GR--FDSERALAAAMSDLRDRILP-PSFL 552
Y +PE L G + +I+SLGV+ +EL G+ F + L + P P
Sbjct: 161 EYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPE 220
Query: 553 SENPKEA-GFCLWQLHPEPLSRPTTREILQ 581
+ EA L +P R T E LQ
Sbjct: 221 WDISPEAKDLIRKLLVKDPEKRLTAEEALQ 250
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 497 WYASPEELSGG-VCTTSSNIYSLGVLFFELF-GRFDSERALAAAMSDLRDRILPPSFLSE 554
WY +PE L GG +++SLGV+ +EL G+ L RIL P +
Sbjct: 163 WYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFD 222
Query: 555 NPKE-------AGFCLWQLHPEPLSRPTTREILQSE 583
PK L+ +P RPT EILQ
Sbjct: 223 EPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHP 258
|
Length = 260 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFELF-GRFDSERALAAAMSDLRDRIL----PPSFL 552
Y +PE G + S+I+SLG L +E+ E A +M DLR ++ PP
Sbjct: 167 YMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE---ARSMQDLRYKVQRGKYPPIPP 223
Query: 553 SENPKEAGFCLWQLHPEPLSRPTTREILQS 582
+ F L +P RP +IL S
Sbjct: 224 IYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 8e-04
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 31/86 (36%)
Query: 498 YASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENP 556
Y +PE L G + S+I+SLGV+ +E + +L+D
Sbjct: 159 YMAPEVLLGKGYYSEKSDIWSLGVILYE--------------LPELKD------------ 192
Query: 557 KEAGFCLWQLHPEPLSRPTTREILQS 582
L +P RP+ +EIL+
Sbjct: 193 ----LIRKMLQKDPEKRPSAKEILEH 214
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 8e-04
Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 16/125 (12%)
Query: 475 SPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL-FGRFDSER 533
S ++ NT Q +T V Y SPE + G + +++I+SLG+ E G+F
Sbjct: 147 SKVLENTLDQCNTFVGTVT----YMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLP 202
Query: 534 ALAAAMSDLRDRIL--PPSFLSENPKEAGF------CLWQLHPEPLSRPTTREILQSEVT 585
+ +L I PP L F C L +P RP+ E+LQ
Sbjct: 203 PGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISAC---LQKDPKKRPSAAELLQHPFI 259
Query: 586 NEFQE 590
+
Sbjct: 260 KKADN 264
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.001
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFEL-FGRF--DSERALAAAMSDLRDRIL--PPSFL 552
Y +PE + G + S+I+SLG+ EL GRF E + +L I+ PP L
Sbjct: 165 YMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRL 224
Query: 553 SENPKEAGFCLWQ---LHPEPLSRPTTREILQ 581
F + L +P RP+ +E+L+
Sbjct: 225 PSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 0.004
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
+W A PE L G+ T+ S+++S GVL +E+F
Sbjct: 172 RWMA-PESLKDGIFTSKSDVWSFGVLLWEIF 201
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 874 | |||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.98 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.98 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.98 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.98 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.98 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.98 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.98 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.98 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.97 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.97 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.97 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.97 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.97 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.97 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.97 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.97 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.97 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.97 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.97 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.97 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.97 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.97 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.97 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.97 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.97 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.97 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.97 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.97 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.97 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.97 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.97 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.97 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.97 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.97 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.97 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.97 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.97 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.97 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.97 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.97 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.97 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.97 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.97 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.97 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.97 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.97 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.97 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.97 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.97 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.97 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.97 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.97 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.97 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.97 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.97 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.97 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.96 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.96 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.96 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.96 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.96 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.96 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.96 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.96 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.96 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.96 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.96 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.96 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.96 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.96 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.96 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.96 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.96 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.96 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.96 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.96 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.96 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.96 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.96 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.96 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.96 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.96 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.96 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.96 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.96 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.96 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.96 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.96 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.96 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.96 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.96 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.96 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.96 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.96 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.96 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.96 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.96 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.96 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.96 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.96 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.96 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.96 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.96 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.96 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.96 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.96 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.96 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.96 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.96 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.96 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.96 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.96 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.96 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.96 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.96 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.96 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.96 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.96 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.96 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.96 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.96 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.96 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.96 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.96 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.96 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.95 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.95 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.95 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.95 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.95 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.95 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.95 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.95 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.95 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.95 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.95 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.95 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.95 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.95 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.95 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.95 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.95 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.95 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.95 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.95 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.95 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.95 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.95 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.95 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.95 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.95 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.95 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.95 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.95 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.95 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.95 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.95 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.95 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.95 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.95 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.95 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.95 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.95 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.95 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.95 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.95 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.95 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.95 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.95 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.95 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.95 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.95 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.95 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.95 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.95 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.95 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.95 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.95 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.95 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.95 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.95 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.95 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.94 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.94 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.94 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.94 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.94 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.94 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.94 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.94 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.94 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.94 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.94 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.94 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.94 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.94 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.94 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.94 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.94 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.94 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.94 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.94 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.94 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.93 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.93 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.93 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.93 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.93 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.93 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.93 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.93 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.93 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.93 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.93 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.92 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.92 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.92 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.92 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.92 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.92 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.91 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.91 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.91 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.9 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.9 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.89 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.89 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.89 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.89 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.88 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.88 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.86 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.86 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.86 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.86 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.86 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.85 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.78 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.78 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.77 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.74 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.64 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.61 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.61 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.56 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.55 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.54 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 99.51 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.44 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.43 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 99.42 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.41 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.4 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 99.36 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 99.34 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.34 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.33 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.33 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.3 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.3 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.29 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 99.29 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.28 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.25 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 99.25 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.24 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.24 | |
| PTZ00421 | 493 | coronin; Provisional | 99.23 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.2 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.19 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.19 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.19 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.18 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.17 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.15 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.14 | |
| PTZ00420 | 568 | coronin; Provisional | 99.13 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.13 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.12 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.12 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.11 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.1 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.09 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 99.07 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.03 | |
| KOG0302 | 440 | consensus Ribosome Assembly protein [General funct | 99.02 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 99.02 | |
| PTZ00421 | 493 | coronin; Provisional | 99.01 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.0 | |
| PTZ00420 | 568 | coronin; Provisional | 99.0 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 98.99 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 98.98 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 98.98 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 98.97 | |
| KOG0270 | 463 | consensus WD40 repeat-containing protein [Function | 98.97 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 98.97 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 98.96 | |
| KOG0302 | 440 | consensus Ribosome Assembly protein [General funct | 98.92 | |
| KOG0269 | 839 | consensus WD40 repeat-containing protein [Function | 98.92 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 98.9 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 98.9 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 98.88 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 98.88 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 98.87 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 98.86 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 98.85 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 98.84 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 98.84 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 98.83 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 98.83 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 98.82 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 98.82 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 98.81 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 98.81 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 98.79 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 98.77 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 98.75 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 98.75 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 98.75 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 98.74 | |
| KOG4283 | 397 | consensus Transcription-coupled repair protein CSA | 98.74 | |
| KOG0303 | 472 | consensus Actin-binding protein Coronin, contains | 98.74 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 98.73 | |
| KOG0647 | 347 | consensus mRNA export protein (contains WD40 repea | 98.73 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 98.73 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 98.72 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 98.72 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 98.72 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 98.71 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 98.71 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 98.69 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 98.67 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 98.66 |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-60 Score=581.27 Aligned_cols=493 Identities=35% Similarity=0.565 Sum_probs=357.1
Q ss_pred eEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcccccc
Q 002843 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (874)
Q Consensus 305 lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~ 384 (874)
+.|||+ +++|.+||......+++.+++.|++||+.||+|||++|||||||||+||||+..+.+|++|||++.....+
T Consensus 57 ~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~-- 133 (793)
T PLN00181 57 RALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD-- 133 (793)
T ss_pred hhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccccc--
Confidence 467876 57999999876557999999999999999999999999999999999999999999999999998754311
Q ss_pred CCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccc
Q 002843 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (874)
Q Consensus 385 ~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~ 464 (874)
.....++.|||.+....... ....+ ..
T Consensus 134 -----------~~~~~ki~DfG~a~~~~~~~----------------------~~~~~--~~------------------ 160 (793)
T PLN00181 134 -----------EDATTKSREIGSSRREEILS----------------------ERRIE--KL------------------ 160 (793)
T ss_pred -----------ccCccccccccccccccccc----------------------ccchh--hh------------------
Confidence 11234566777654210000 00000 00
Q ss_pred cCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhc
Q 002843 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRD 544 (874)
Q Consensus 465 ~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~ 544 (874)
.......++ ......+||++|||||++.+..|+.++|||||||+||||++|++|+......+..+..
T Consensus 161 ---~~~~~~~~~----------~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~ 227 (793)
T PLN00181 161 ---EEVKKQPFP----------MKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRH 227 (793)
T ss_pred ---hccccCCCc----------ccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHH
Confidence 000000000 1113468999999999999999999999999999999999999998876666667766
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhhh-hhhhccccccchhHHHHHHHHHHHHHHHHH
Q 002843 545 RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA-EELLSSIDQDDSESELLLHFLISLEEEKQN 623 (874)
Q Consensus 545 ~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~~-~e~~~~ieqeeaE~elL~eFL~~l~qqKqe 623 (874)
..+|+.+....+...+++.+||+++|.+||++.|+|+||||........ .+......+...+.+.+.+|+...++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 307 (793)
T PLN00181 228 RVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIEEQELLLEFLFLIQQRKQE 307 (793)
T ss_pred hhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhhHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 6777766666778889999999999999999999999999987654332 222223333344456667888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccCCCCcccccccccccc----c------ccc-ccCCcccchhHHHH
Q 002843 624 QASKLVGEIRSLEADIKEVERRHYLKKPLVDPSLQNESAPSRENRYFNEQL----S------SSE-AQLSPISDANEMRL 692 (874)
Q Consensus 624 el~eLQ~ELq~LeeDi~eVEr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~------~~~-~~~~~~~~~~~~r~ 692 (874)
++.+++.+++.|+.||+++++++.+......... ..... ++++..... . .+. ......+.+.++||
T Consensus 308 ~~~~~~~~~~~l~~~i~~~~~r~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~~ 384 (793)
T PLN00181 308 AADKLQDTISLLSSDIDQVVKRQLVLQQKGSDVR--SFLAS-RKRIRQGAETLAAEEENDDNSSKLDDTLESTLLESSRL 384 (793)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccccccc--ccccc-chhhhccccchhhccccccccccccccccccchhhhHH
Confidence 9999999999999999999998765432111110 00011 111110000 0 000 01111223458999
Q ss_pred HHhHHHHHHHHhhhhhccccCCCCCcccccchhhhh--------hh-------hhhhh-hccccccCCCCccchhhhhcc
Q 002843 693 MRNLNQLERAYFSMRSQIQLSDSDSTTRADNDLLRD--------RE-------NLFLA-QQDQEIQNPTDRLGAFFDGLC 756 (874)
Q Consensus 693 ~~~~~~l~~~y~~~r~~~~~~~~~~~~~~~~d~~~~--------~~-------~~~~~-~~~~~~~~~~~~l~~f~~~l~ 756 (874)
|+||++|++|||++|++...... ...+.+.+. +. +.+.+ .....+.....|+++|+++||
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~ 460 (793)
T PLN00181 385 MRNLKKLESVYFATRYRQIKAAA----AAEKPLARYYSALSENGRSSEKSSMSNPAKPPDFYINDSRQGGWIDPFLEGLC 460 (793)
T ss_pred HHHHHHHHHHHhhhhhccccccc----cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 99999999999999986532210 111111110 00 00000 011112456788999999999
Q ss_pred ceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEE
Q 002843 757 KYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCW 836 (874)
Q Consensus 757 ~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~w 836 (874)
|+++++++++.+.++.|++.+|++.|++|+|+|||++|||||.|++|+|||+.+......+.|+|+..+.++++|.+++|
T Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 540 (793)
T PLN00181 461 KYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICW 540 (793)
T ss_pred hhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEe
Confidence 99999999999999999999999999999999999999999999999999998755555567889998888899999999
Q ss_pred eCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeeee
Q 002843 837 NNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 837 np~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
+|+++++||||++||+|+|||+.+++. +.+|...|++
T Consensus 541 ~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~ 580 (793)
T PLN00181 541 NSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWS 580 (793)
T ss_pred ccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEE
Confidence 998899999999999999999987643 6677776665
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=343.05 Aligned_cols=217 Identities=23% Similarity=0.246 Sum_probs=183.8
Q ss_pred ChhHHHHHHHHhHHhhcCCCCCceeccceeecCc-ccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHH
Q 002843 253 PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGS-LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIEC 331 (874)
Q Consensus 253 ~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~ 331 (874)
+-.+.+.+.+-..+.+..+|++|+++.+...++. .. +.||||+||+|+++++..+ .++|...
T Consensus 118 ~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~is----------------I~mEYMDgGSLd~~~k~~g-~i~E~~L 180 (364)
T KOG0581|consen 118 PALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEIS----------------ICMEYMDGGSLDDILKRVG-RIPEPVL 180 (364)
T ss_pred HHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEE----------------eehhhcCCCCHHHHHhhcC-CCCHHHH
Confidence 3445556667778888899999999999888775 44 4899999999999999876 7999999
Q ss_pred HHHHHHHHHHHHHHHH-CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccch
Q 002843 332 LYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIA 410 (874)
Q Consensus 332 ~~I~~QIl~aL~yLHs-~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~ 410 (874)
-.|+++|++||.|||. ++||||||||+|||+++.|.|||||||.++.+..+
T Consensus 181 ~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---------------------------- 232 (364)
T KOG0581|consen 181 GKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---------------------------- 232 (364)
T ss_pred HHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh----------------------------
Confidence 9999999999999995 89999999999999999999999999998865411
Q ss_pred hhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccc
Q 002843 411 SAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVS 490 (874)
Q Consensus 411 ~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t 490 (874)
...
T Consensus 233 -----------------------------------------------------------------------------~a~ 235 (364)
T KOG0581|consen 233 -----------------------------------------------------------------------------IAN 235 (364)
T ss_pred -----------------------------------------------------------------------------hcc
Confidence 014
Q ss_pred cccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH-------HHHHHHHhhcCCCCCCCCC-CCHHHHHHH
Q 002843 491 EQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA-------LAAAMSDLRDRILPPSFLS-ENPKEAGFC 562 (874)
Q Consensus 491 ~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~-------~~~~~~~l~~~~lpp~~~~-~~p~l~dLi 562 (874)
+.+||..|||||.+.+..|+.++||||||+.++||++|+.|+.. ....+..+.....|.-... .++++++|+
T Consensus 236 tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV 315 (364)
T KOG0581|consen 236 TFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFV 315 (364)
T ss_pred cccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHH
Confidence 67999999999999999999999999999999999999777633 4445666665544443333 568999999
Q ss_pred HHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 563 LWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 563 ~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
..||++||.+||++.|+|+|||+......
T Consensus 316 ~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~ 344 (364)
T KOG0581|consen 316 SCCLRKDPSERPSAKQLLQHPFIKKFEDP 344 (364)
T ss_pred HHHhcCCcccCCCHHHHhcCHHHhhcccc
Confidence 99999999999999999999999976543
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=348.43 Aligned_cols=210 Identities=18% Similarity=0.193 Sum_probs=173.5
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+...|....||++|...+-..-.... ++||||++||+|.+++-.++ .+.+.....+|+||+.
T Consensus 225 ~EieILkkL~HP~IV~~~d~f~~~ds~----------------YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~ 287 (475)
T KOG0615|consen 225 NEIEILKKLSHPNIVRIKDFFEVPDSS----------------YMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLT 287 (475)
T ss_pred HHHHHHHhcCCCCEEEEeeeeecCCce----------------EEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHH
Confidence 344677888999999888775533332 46999999999999998877 7999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecC---CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQS---NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~---~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
||.|||++||+||||||+|||+..+ ..+||+|||+|+..++.
T Consensus 288 avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~----------------------------------- 332 (475)
T KOG0615|consen 288 AVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG----------------------------------- 332 (475)
T ss_pred HHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccc-----------------------------------
Confidence 9999999999999999999999876 77999999999854410
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.-+.+.||||.
T Consensus 333 ---------------------------------------------------------------------sfm~TlCGTps 343 (475)
T KOG0615|consen 333 ---------------------------------------------------------------------SFMKTLCGTPS 343 (475)
T ss_pred ---------------------------------------------------------------------eehhhhcCCcc
Confidence 01147799999
Q ss_pred ccCcccccCCC---CCCccchhHHHHHHHHhcCCCCchHHHHH---HHHHhhc---CCCCCCCCCCCHHHHHHHHHcccc
Q 002843 498 YASPEELSGGV---CTTSSNIYSLGVLFFELFGRFDSERALAA---AMSDLRD---RILPPSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 498 Y~APEvl~g~~---ys~kSDIwSLGVIL~ELltG~~p~~~~~~---~~~~l~~---~~lpp~~~~~~p~l~dLi~~cL~~ 568 (874)
|.|||++.+.. |..++||||||||||-+|+|++||.+... ....+.. ...|+.+...+.+..+||.+||..
T Consensus 344 YvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~V 423 (475)
T KOG0615|consen 344 YVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVV 423 (475)
T ss_pred ccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEe
Confidence 99999999865 34588999999999999999999965433 2233433 234677777788899999999999
Q ss_pred CCCCCCChhHHhhhHHHHhhHhh
Q 002843 569 EPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
||++|||+.|+|+||||+..+-.
T Consensus 424 dP~~R~s~~eaL~hpW~~~~~~~ 446 (475)
T KOG0615|consen 424 DPENRPSADEALNHPWFKDAPCL 446 (475)
T ss_pred CcccCcCHHHHhcChhhhccccc
Confidence 99999999999999999976533
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=323.99 Aligned_cols=219 Identities=18% Similarity=0.177 Sum_probs=180.8
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYI 334 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I 334 (874)
+.....++-..+....||-+|.+.-+.+.....+ +|+||+.||.|+-.|++.+ .|++..++.|
T Consensus 68 e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy----------------lVld~~~GGeLf~hL~~eg-~F~E~~arfY 130 (357)
T KOG0598|consen 68 EVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY----------------LVLDYLNGGELFYHLQREG-RFSEDRARFY 130 (357)
T ss_pred hHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE----------------EEEeccCCccHHHHHHhcC-CcchhHHHHH
Confidence 3344566667777799999999888877555544 5999999999999999887 7999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+..|+.||.|||++|||||||||+||||+..|+++|+||||++.....+
T Consensus 131 laEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~------------------------------- 179 (357)
T KOG0598|consen 131 LAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG------------------------------- 179 (357)
T ss_pred HHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC-------------------------------
Confidence 9999999999999999999999999999999999999999998422000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
....+.+|
T Consensus 180 ------------------------------------------------------------------------~~t~tfcG 187 (357)
T KOG0598|consen 180 ------------------------------------------------------------------------DATRTFCG 187 (357)
T ss_pred ------------------------------------------------------------------------CccccccC
Confidence 00135799
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
|+.|||||++.+.+|+.++|.|||||++|||++|.+||.. ....+..+....++....-.++...+|+.++|..||++
T Consensus 188 T~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~ 267 (357)
T KOG0598|consen 188 TPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQ 267 (357)
T ss_pred CccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHH
Confidence 9999999999999999999999999999999999999954 34455555554432222224567889999999999999
Q ss_pred CC----ChhHHhhhHHHHhhHhhhh
Q 002843 573 RP----TTREILQSEVTNEFQEVCA 593 (874)
Q Consensus 573 RP----Ta~EiL~hp~~~~~~~~~~ 593 (874)
|. .+.+|-.||||..+.+...
T Consensus 268 RLg~~~d~~~ik~HpfF~~inW~~l 292 (357)
T KOG0598|consen 268 RLGGPGDAEEIKRHPFFKGINWEKL 292 (357)
T ss_pred hcCCCCChHHhhcCcccccCCHHHH
Confidence 95 6889999999999887654
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=339.17 Aligned_cols=206 Identities=20% Similarity=0.193 Sum_probs=177.9
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..+.++..||++|+++.-.....|.++ +.|+|..++|.+++++++ .++|.+++.|++||
T Consensus 65 v~~EIeIHr~L~HpnIV~f~~~FEDs~nVYi----------------vLELC~~~sL~el~Krrk-~ltEpEary~l~QI 127 (592)
T KOG0575|consen 65 VLNEIEIHRSLKHPNIVQFYHFFEDSNNVYI----------------VLELCHRGSLMELLKRRK-PLTEPEARYFLRQI 127 (592)
T ss_pred HHHHHHHHHhcCCCcEEeeeeEeecCCceEE----------------EEEecCCccHHHHHHhcC-CCCcHHHHHHHHHH
Confidence 4555688999999999999999998888775 999999999999999766 89999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||+++|||||||..||+|+++.+|||+|||||..+..+.
T Consensus 128 v~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~----------------------------------- 172 (592)
T KOG0575|consen 128 VEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG----------------------------------- 172 (592)
T ss_pred HHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcc-----------------------------------
Confidence 999999999999999999999999999999999999987544110
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
+++ .+.+|||.|
T Consensus 173 ------------------------Erk--------------------------------------------~TlCGTPNY 184 (592)
T KOG0575|consen 173 ------------------------ERK--------------------------------------------KTLCGTPNY 184 (592)
T ss_pred ------------------------ccc--------------------------------------------ceecCCCcc
Confidence 000 367999999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
+|||++....+++.+||||+|||||.||+|.|||+.. ...+..++. ...-|. ..++.+++||.+||.+||.+|||
T Consensus 185 IAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~--~ls~~A~dLI~~lL~~~P~~Rps 262 (592)
T KOG0575|consen 185 IAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS--HLSAEAKDLIRKLLRPNPSERPS 262 (592)
T ss_pred cChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc--ccCHHHHHHHHHHhcCCcccCCC
Confidence 9999999989999999999999999999999999654 445555554 333333 44677889999999999999999
Q ss_pred hhHHhhhHHHH
Q 002843 576 TREILQSEVTN 586 (874)
Q Consensus 576 a~EiL~hp~~~ 586 (874)
+.+||.|+||.
T Consensus 263 l~~vL~h~Ff~ 273 (592)
T KOG0575|consen 263 LDEVLDHPFFK 273 (592)
T ss_pred HHHHhcCHhhh
Confidence 99999999994
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=306.29 Aligned_cols=213 Identities=15% Similarity=0.098 Sum_probs=174.4
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLY 333 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~ 333 (874)
...+++--+++-..|||+|..+....-..+..+ +++||||.+|+|.+.|+. .++.+++..++.
T Consensus 63 q~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl--------------nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk 128 (375)
T KOG0591|consen 63 QDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL--------------NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWK 128 (375)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHhhhccchhh--------------HHHHHhhcccCHHHHHHHHHhccccCchHHHHH
Confidence 446788899999999999999985443444322 569999999999999964 455899999999
Q ss_pred HHHHHHHHHHHHHH--CC--CcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccc
Q 002843 334 IFRQIVALVDYHHT--QG--VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGI 409 (874)
Q Consensus 334 I~~QIl~aL~yLHs--~g--IIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~ 409 (874)
+|.|++.||..||+ .. |+||||||.||+|+.+|.+||.|||+++.+..+.
T Consensus 129 ~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~-------------------------- 182 (375)
T KOG0591|consen 129 YFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKT-------------------------- 182 (375)
T ss_pred HHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchh--------------------------
Confidence 99999999999999 44 9999999999999999999999999998654110
Q ss_pred hhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccc
Q 002843 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSV 489 (874)
Q Consensus 410 ~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~ 489 (874)
+..
T Consensus 183 -----------------------------------------------------------------------------tfA 185 (375)
T KOG0591|consen 183 -----------------------------------------------------------------------------TFA 185 (375)
T ss_pred -----------------------------------------------------------------------------HHH
Confidence 011
Q ss_pred ccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCC-CCCHHHHHHHHHcc
Q 002843 490 SEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFL-SENPKEAGFCLWQL 566 (874)
Q Consensus 490 t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~-~~~p~l~dLi~~cL 566 (874)
.+.+|||.||+||.+.+.+|+++||||||||++|||+.-.+||.+. ...-.++.++..||-.. -.+..+..||..|+
T Consensus 186 ~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci 265 (375)
T KOG0591|consen 186 HSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCI 265 (375)
T ss_pred HhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHc
Confidence 5789999999999999999999999999999999999999999654 33445566666655552 23456889999999
Q ss_pred ccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 567 HPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
.+||..||+. +|++..++..
T Consensus 266 ~vd~~~RP~t-----~~~v~di~~~ 285 (375)
T KOG0591|consen 266 AVDPEQRPDT-----VPYVQDIQSE 285 (375)
T ss_pred cCCcccCCCc-----chHHHHHHHH
Confidence 9999999998 6777766653
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=323.84 Aligned_cols=243 Identities=12% Similarity=0.164 Sum_probs=188.9
Q ss_pred CceEEEecCCCCcccccccccccccccccC-CChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCcccc
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (874)
.+||||||. .......+..|.+.... -+.-......+-.++....||++|.+++-...++..
T Consensus 22 sfavVykg~----h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i------------- 84 (429)
T KOG0595|consen 22 SFAVVYKGR----HKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFI------------- 84 (429)
T ss_pred ceEEEEEeE----eccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeE-------------
Confidence 358999997 44434444444443332 222333356666888899999999999998866654
Q ss_pred CCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC------CcEEEeccc
Q 002843 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS------NQVKYIGPI 374 (874)
Q Consensus 301 ~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~------~~vKLiDFG 374 (874)
++|||||+||||.+||++++ .+++..+++++.||+.||++||+++||||||||+||||+.. -.+||+|||
T Consensus 85 ---~lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG 160 (429)
T KOG0595|consen 85 ---YLVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFG 160 (429)
T ss_pred ---EEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence 45999999999999999987 79999999999999999999999999999999999999875 358999999
Q ss_pred cchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCC
Q 002843 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (874)
Q Consensus 375 lar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 454 (874)
+||.+....+
T Consensus 161 fAR~L~~~~~---------------------------------------------------------------------- 170 (429)
T KOG0595|consen 161 FARFLQPGSM---------------------------------------------------------------------- 170 (429)
T ss_pred hhhhCCchhH----------------------------------------------------------------------
Confidence 9986541100
Q ss_pred CCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH
Q 002843 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA 534 (874)
Q Consensus 455 d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~ 534 (874)
..+.+|+|.|||||++...+|+.|+|+||+|+|||+|++|.+||..
T Consensus 171 ----------------------------------a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 171 ----------------------------------AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred ----------------------------------HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 1367999999999999999999999999999999999999999963
Q ss_pred --HHHHHHHhhc-CCCCCCCC-CCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 535 --LAAAMSDLRD-RILPPSFL-SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 535 --~~~~~~~l~~-~~lpp~~~-~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
..+.+..++. ..+.+.+. ...+.+.+|+..+|..+|..|.+..+-+.|+++..-.
T Consensus 217 ~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 217 ETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred cCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 2233333333 22222222 2234456899999999999999999999999887644
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=328.49 Aligned_cols=220 Identities=17% Similarity=0.194 Sum_probs=178.5
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
+|..-+.||-++.++-..+.+.+.+. ++||+++|+|.++|++.| .|++..++.++.||+.||+
T Consensus 126 ~l~~L~~hPgivkLy~TFQD~~sLYF----------------vLe~A~nGdll~~i~K~G-sfde~caR~YAAeIldAle 188 (604)
T KOG0592|consen 126 ALTQLSGHPGIVKLYFTFQDEESLYF----------------VLEYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALE 188 (604)
T ss_pred HHHHhhCCCCeEEEEEEeecccceEE----------------EEEecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHH
Confidence 45555599999999988887766664 999999999999999988 8999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
|||++|||||||||+||||+.++++||+|||.|+.+......+.
T Consensus 189 ylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~------------------------------------ 232 (604)
T KOG0592|consen 189 YLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQE------------------------------------ 232 (604)
T ss_pred HHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcccc------------------------------------
Confidence 99999999999999999999999999999999997662211000
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
.... .++.. ....+.+||..|.+||+
T Consensus 233 ---------------~~~~-------------------------~~~a~--------------s~~~SFVGTAeYVSPEl 258 (604)
T KOG0592|consen 233 ---------------NPVD-------------------------PNQAS--------------SRRSSFVGTAEYVSPEL 258 (604)
T ss_pred ---------------CccC-------------------------ccccc--------------CcccceeeeecccCHHH
Confidence 0000 00000 00146799999999999
Q ss_pred ccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhc--CCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHH
Q 002843 504 LSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (874)
Q Consensus 504 l~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~--~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~Ei 579 (874)
|..+..++.+|||+||||||+|+.|.+||.+..+ .++.+.. -.+|+.|. +.+.+|+.++|..||.+|+|+.||
T Consensus 259 L~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp---~~a~dLv~KLLv~dp~~Rlt~~qI 335 (604)
T KOG0592|consen 259 LNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGFP---EDARDLIKKLLVRDPSDRLTSQQI 335 (604)
T ss_pred hcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCCC---HHHHHHHHHHHccCccccccHHHH
Confidence 9999999999999999999999999999965443 2344433 33455554 678899999999999999999999
Q ss_pred hhhHHHHhhHhhhh
Q 002843 580 LQSEVTNEFQEVCA 593 (874)
Q Consensus 580 L~hp~~~~~~~~~~ 593 (874)
.+||||+++.+...
T Consensus 336 k~HpFF~~Vdw~nl 349 (604)
T KOG0592|consen 336 KAHPFFEGVDWENL 349 (604)
T ss_pred hhCcccccCChhhh
Confidence 99999999988764
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=329.27 Aligned_cols=244 Identities=18% Similarity=0.200 Sum_probs=186.4
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHH-HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAA-LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
.|-||++.. .+..+..+.|...+.--..+.. ..-.++.|.+.+.||++|.+......+.+ .+
T Consensus 23 fGsV~la~~----~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~-~L------------ 85 (538)
T KOG0661|consen 23 FGSVYLAKS----KETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR-IL------------ 85 (538)
T ss_pred ceeEEEeee----cCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc-eE------------
Confidence 588888872 3334444555444444344443 34455567777779999999988775553 22
Q ss_pred CCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
.+|||||+ .+|.++++.+++.|++..++.|++||+.||+|+|.+|+.||||||+|||+..+..+||+|||+||.+.
T Consensus 86 --~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~- 161 (538)
T KOG0661|consen 86 --YFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVR- 161 (538)
T ss_pred --eeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccc-
Confidence 46999998 79999999988899999999999999999999999999999999999999999999999999999654
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
T Consensus 162 -------------------------------------------------------------------------------- 161 (538)
T KOG0661|consen 162 -------------------------------------------------------------------------------- 161 (538)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC-CCCCccchhHHHHHHHHhcCCCCch---HHHHH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSE---RALAA 537 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~---~~~~~ 537 (874)
++. ..|..+-|+||+|||++... -|+.+.||||+|||++|+.+-++-| .+.+.
T Consensus 162 -----------Skp------------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dq 218 (538)
T KOG0661|consen 162 -----------SKP------------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQ 218 (538)
T ss_pred -----------cCC------------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHH
Confidence 111 13678999999999998864 5899999999999999999865544 22222
Q ss_pred HHHHhhc---------------------CCCC---C-----CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 538 AMSDLRD---------------------RILP---P-----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 538 ~~~~l~~---------------------~~lp---p-----~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
. ..+++ -.+| + -+....++..++|.+||.+||.+||||.|+|+||||+.-
T Consensus 219 i-~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 219 I-YKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred H-HHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 1 11111 0111 1 123445678899999999999999999999999999965
Q ss_pred Hhh
Q 002843 589 QEV 591 (874)
Q Consensus 589 ~~~ 591 (874)
...
T Consensus 298 ~~~ 300 (538)
T KOG0661|consen 298 RAS 300 (538)
T ss_pred ccc
Confidence 544
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=331.00 Aligned_cols=310 Identities=15% Similarity=0.128 Sum_probs=206.3
Q ss_pred cccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCC-ChhHHH-HHHHHhHHhhcCC
Q 002843 195 MLSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAAL-KAAGAMMVASNAS 271 (874)
Q Consensus 195 ~~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~-~~~~~~l~~~~~~ 271 (874)
.++.+.+.+ |++.+++|+|-.+ ...|.-|-||-.. .++ +..+ ..+++. ..++-.+|....+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrL-arKk~Tg~iyAmK---~Lk------------KS~M~~~~Qv~hV~aERdiL~~~ds 200 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRL-ARKKDTGEIYAMK---ILK------------KSEMLKKNQVEHVRAERDILAEVDS 200 (550)
T ss_pred cCCcccchhheeeccccceeEEE-EEEccCCcEEeee---ccc------------HHHHHhhhhHHHHHHHHHHhhhcCC
Confidence 567777777 9999999988432 2233444455443 111 1111 122222 3455567777888
Q ss_pred CCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002843 272 PKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVT 351 (874)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gII 351 (874)
|.+|.++-+.....+.+ |+|||++|||+..+|.+.+ .|++.+++.++.+++.|++.||..|+|
T Consensus 201 ~~vVKLyYsFQD~~~LY----------------LiMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~gyI 263 (550)
T KOG0605|consen 201 PWVVKLYYSFQDKEYLY----------------LIMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQLGYI 263 (550)
T ss_pred CcEEEEEEEecCCCeeE----------------EEEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHcCcc
Confidence 99999888877555544 5999999999999999987 899999999999999999999999999
Q ss_pred ccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCC
Q 002843 352 FLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFP 431 (874)
Q Consensus 352 HRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~ 431 (874)
||||||+|+||+..|++||+||||+.-+......+. .+...+. ...+.+.. ...+.
T Consensus 264 HRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~---------~~~~~~~----------~~~~~~~~-----~~~~~ 319 (550)
T KOG0605|consen 264 HRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIES---------YRLDEQM----------QINLSEAK-----PSDFP 319 (550)
T ss_pred cccCChhheeecCCCCEeeccccccchhhhhhhhhh---------hcchhhh----------hhhhccCC-----Ccccc
Confidence 999999999999999999999999964441111000 0000000 00000000 00000
Q ss_pred CccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCC
Q 002843 432 SKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTT 511 (874)
Q Consensus 432 ~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~ 511 (874)
.. .....++++..+ .. ....++ ..-..+.+|||-|||||++.+..|+.
T Consensus 320 ~~-~~~~~~~~~~~~--~~---------------------------~w~~nr--r~~a~StVGTPDYiAPEVll~kgY~~ 367 (550)
T KOG0605|consen 320 KF-NTPRSTMSRREQ--LQ---------------------------TWKRNR--RQLAYSTVGTPDYIAPEVLLGKGYGK 367 (550)
T ss_pred cc-ccccchhhHHHH--HH---------------------------HHHhhh--hhhhhcccCCccccchHHHhcCCCCc
Confidence 00 000000000000 00 000000 01124679999999999999999999
Q ss_pred ccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhc---CCCCCCCCCCCHHHHHHHHHccccCCCCCC---ChhHHhhhH
Q 002843 512 SSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRD---RILPPSFLSENPKEAGFCLWQLHPEPLSRP---TTREILQSE 583 (874)
Q Consensus 512 kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~---~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP---Ta~EiL~hp 583 (874)
.+|.||||||+||||.|++||.. .......|.. ....|.-...+++++|||.+||. ||.+|. .+.||.+||
T Consensus 368 ~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HP 446 (550)
T KOG0605|consen 368 ECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHP 446 (550)
T ss_pred cccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCC
Confidence 99999999999999999999932 2333444433 34445555566889999999999 999996 589999999
Q ss_pred HHHhhHhhhhh
Q 002843 584 VTNEFQEVCAE 594 (874)
Q Consensus 584 ~~~~~~~~~~~ 594 (874)
||+++.+....
T Consensus 447 fF~~v~W~~l~ 457 (550)
T KOG0605|consen 447 FFKGVDWDHLR 457 (550)
T ss_pred ccccCCcchhh
Confidence 99999887763
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=306.27 Aligned_cols=245 Identities=16% Similarity=0.172 Sum_probs=184.1
Q ss_pred CceEEEecCCCCcccccccccccccccccCC-ChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCcccc
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (874)
..|||||-. -+....-.+.|+++.... |.-..-.+.+-.++....|||.|.++....-.....
T Consensus 14 SYGvV~KCr----nk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklh------------ 77 (396)
T KOG0593|consen 14 SYGVVMKCR----NKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLH------------ 77 (396)
T ss_pred cceEEEEec----cCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeE------------
Confidence 457777765 233334445555655532 444444566678999999999999998866554433
Q ss_pred CCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 301 ~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
||.|||+. ++.+-|.+....++...+..|++|++.|+.|||++++|||||||+||||+.+|.+||||||+|+.+.
T Consensus 78 ----LVFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~ 152 (396)
T KOG0593|consen 78 ----LVFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLS 152 (396)
T ss_pred ----EEeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhc
Confidence 59999996 5555566544479999999999999999999999999999999999999999999999999998544
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
.++
T Consensus 153 ~pg----------------------------------------------------------------------------- 155 (396)
T KOG0593|consen 153 APG----------------------------------------------------------------------------- 155 (396)
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 110
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchH---HHH
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSER---ALA 536 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~---~~~ 536 (874)
-..|..+.|+||+|||.+.| -+|+.++||||+||++.||++|.+-|. +..
T Consensus 156 --------------------------d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiD 209 (396)
T KOG0593|consen 156 --------------------------DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDID 209 (396)
T ss_pred --------------------------chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHH
Confidence 01157788999999999998 579999999999999999999976553 222
Q ss_pred HHHHHhhc--------------------CC----------CCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHH
Q 002843 537 AAMSDLRD--------------------RI----------LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (874)
Q Consensus 537 ~~~~~l~~--------------------~~----------lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~ 586 (874)
... .++. ++ +...++..+..+.+|+..||+.||.+|++.+|+|.|+||.
T Consensus 210 QLy-~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 210 QLY-LIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred HHH-HHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence 211 1110 10 1122344445678999999999999999999999999997
Q ss_pred hhHhh
Q 002843 587 EFQEV 591 (874)
Q Consensus 587 ~~~~~ 591 (874)
.+.+.
T Consensus 289 ~~~er 293 (396)
T KOG0593|consen 289 GFIER 293 (396)
T ss_pred HHHHH
Confidence 66544
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=323.37 Aligned_cols=236 Identities=22% Similarity=0.189 Sum_probs=185.5
Q ss_pred CCceEEEecCCCCccccccccc-ccccccccCCChh--HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCc
Q 002843 221 KGKGIVCRGPPLNAFKERRGMI-DTKAFVTTTMPSD--AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (874)
Q Consensus 221 kgkGvv~kg~~~~~~~~~~~~~-~~~~~~~~~~~~d--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (874)
.+.|.||||.+ +... .+++.+.+....+ ......+..++....|||+|.+..+......
T Consensus 52 G~~g~V~~~~~-------~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~----------- 113 (362)
T KOG0192|consen 52 GSFGTVYKGKW-------RGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG----------- 113 (362)
T ss_pred CCceeEEEEEe-------CCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC-----------
Confidence 36788999986 4555 5555555533222 3356777789999999999998877553321
Q ss_pred cccCCCceEeeccCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCceEEecCC-cEEEeccc
Q 002843 298 SCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQG-VTFLDLKPSSFKLLQSN-QVKYIGPI 374 (874)
Q Consensus 298 ~~~~~~~lvMEy~~GgsL~~~L~~-~~~~lse~e~~~I~~QIl~aL~yLHs~g-IIHRDLKPsNILL~~~~-~vKLiDFG 374 (874)
..|+||||+++|+|.++|.. ....++...++.|+.||+.||.|||+++ ||||||||+|||++.++ ++||+|||
T Consensus 114 ----~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFG 189 (362)
T KOG0192|consen 114 ----SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFG 189 (362)
T ss_pred ----ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCc
Confidence 23789999999999999987 3558999999999999999999999999 99999999999999997 99999999
Q ss_pred cchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCC
Q 002843 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (874)
Q Consensus 375 lar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 454 (874)
+++......
T Consensus 190 lsr~~~~~~----------------------------------------------------------------------- 198 (362)
T KOG0192|consen 190 LSREKVISK----------------------------------------------------------------------- 198 (362)
T ss_pred cceeecccc-----------------------------------------------------------------------
Confidence 987433000
Q ss_pred CCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccccc--CCCCCCccchhHHHHHHHHhcCCCCch
Q 002843 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS--GGVCTTSSNIYSLGVLFFELFGRFDSE 532 (874)
Q Consensus 455 d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~--g~~ys~kSDIwSLGVIL~ELltG~~p~ 532 (874)
...+...||+.|||||++. ...|+.++|||||||+||||+||..||
T Consensus 199 --------------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf 246 (362)
T KOG0192|consen 199 --------------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPF 246 (362)
T ss_pred --------------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCC
Confidence 0013468999999999999 558999999999999999999999888
Q ss_pred HHHH--HHHHHh-hcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 533 RALA--AAMSDL-RDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 533 ~~~~--~~~~~l-~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
.... .....+ .....|+......+.+..|+.+||+.||..||++.+|+.
T Consensus 247 ~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 247 EDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred CCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 5433 223333 334444444446788999999999999999999999864
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-35 Score=309.12 Aligned_cols=247 Identities=18% Similarity=0.136 Sum_probs=184.7
Q ss_pred cCCceEEEecCCCCcccccccccccccccccCCC--hhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCc
Q 002843 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (874)
Q Consensus 220 ~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (874)
-.-+||||||.- +. -.++.+.+-++.+.. ---+..+.+-+++-+..|||||.|...+++....++
T Consensus 86 EGtyGiVYRakd----k~-t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i-------- 152 (419)
T KOG0663|consen 86 EGTYGVVYRAKD----KK-TDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI-------- 152 (419)
T ss_pred cCcceeEEEecc----CC-cceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee--------
Confidence 346899999972 11 122223222222210 011224445566667779999999999887666554
Q ss_pred cccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccch
Q 002843 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 298 ~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
.+|||||+ -||..+|..-..+|...++..++.|++.||+|||.+.|+||||||+|+|+++.|.+||+|||+||
T Consensus 153 ------y~VMe~~E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR 225 (419)
T KOG0663|consen 153 ------YIVMEYVE-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAR 225 (419)
T ss_pred ------eeeHHHHH-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhh
Confidence 67999999 69999999877799999999999999999999999999999999999999999999999999999
Q ss_pred hccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCC
Q 002843 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (874)
Q Consensus 378 ~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~ 457 (874)
.+.++
T Consensus 226 ~ygsp--------------------------------------------------------------------------- 230 (419)
T KOG0663|consen 226 EYGSP--------------------------------------------------------------------------- 230 (419)
T ss_pred hhcCC---------------------------------------------------------------------------
Confidence 65511
Q ss_pred CcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHHH
Q 002843 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERALA 536 (874)
Q Consensus 458 ~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~~ 536 (874)
.+.+|..+-|.||+|||.+.|.+ |+++.||||+|||+.||+++.+-|....
T Consensus 231 ----------------------------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s 282 (419)
T KOG0663|consen 231 ----------------------------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS 282 (419)
T ss_pred ----------------------------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc
Confidence 12346788999999999999965 9999999999999999999876653221
Q ss_pred ---H---HHHHhhc---CCCC----------------------CCCCCC--CHHHHHHHHHccccCCCCCCChhHHhhhH
Q 002843 537 ---A---AMSDLRD---RILP----------------------PSFLSE--NPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (874)
Q Consensus 537 ---~---~~~~l~~---~~lp----------------------p~~~~~--~p~l~dLi~~cL~~dP~~RPTa~EiL~hp 583 (874)
. .+..+-. .++| ..|... +....+|+..+|.+||.+|.||.|.|+|+
T Consensus 283 E~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~ 362 (419)
T KOG0663|consen 283 EIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE 362 (419)
T ss_pred hHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc
Confidence 1 1111110 1111 112222 24467999999999999999999999999
Q ss_pred HHHhhH
Q 002843 584 VTNEFQ 589 (874)
Q Consensus 584 ~~~~~~ 589 (874)
||.+.+
T Consensus 363 ~F~e~P 368 (419)
T KOG0663|consen 363 YFRETP 368 (419)
T ss_pred ccccCC
Confidence 999844
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=314.95 Aligned_cols=220 Identities=20% Similarity=0.168 Sum_probs=173.2
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||++|............. .++.|||+.||+|.+++++.+..|++..++.+.+
T Consensus 59 ~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~--------------~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr 124 (313)
T KOG0198|consen 59 ESLEREIRILSRLNHPNIVQYYGSSSSRENDE--------------YNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTR 124 (313)
T ss_pred HHHHHHHHHHHhCCCCCEEeeCCccccccCee--------------eEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHH
Confidence 33556667788888999998877522222111 2569999999999999998765799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEec-CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~-~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
||+.||+|||++|||||||||+|||++. ++.+||+|||+++......
T Consensus 125 ~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~-------------------------------- 172 (313)
T KOG0198|consen 125 QILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG-------------------------------- 172 (313)
T ss_pred HHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccc--------------------------------
Confidence 9999999999999999999999999999 6999999999987433000
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
... .......||
T Consensus 173 ------------------------~~~--------------------------------------------~~~~~~~Gt 184 (313)
T KOG0198|consen 173 ------------------------TKS--------------------------------------------DSELSVQGT 184 (313)
T ss_pred ------------------------ccc--------------------------------------------cccccccCC
Confidence 000 001356899
Q ss_pred ccccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHH----HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCC
Q 002843 496 KWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERAL----AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 496 ~~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~----~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP 570 (874)
+.|||||++..+. ...++|||||||++.||+||.+||... ...+........|+.....++...+|+.+||..||
T Consensus 185 p~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p 264 (313)
T KOG0198|consen 185 PNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDP 264 (313)
T ss_pred ccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCc
Confidence 9999999999633 335999999999999999999998763 33344444455554445566789999999999999
Q ss_pred CCCCChhHHhhhHHHHhhHh
Q 002843 571 LSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 571 ~~RPTa~EiL~hp~~~~~~~ 590 (874)
++||||.++|+|||++....
T Consensus 265 ~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 265 EKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred ccCcCHHHHhhChhhhcccc
Confidence 99999999999999986544
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=322.58 Aligned_cols=205 Identities=22% Similarity=0.278 Sum_probs=170.1
Q ss_pred HHhHHhhcC-CCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 262 GAMMVASNA-SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 262 ~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
+...++... ||+++.+.......... +++||||.||+|.++|.+.+ ++.+.+++.+|+||+.
T Consensus 69 Ei~~~~~~~~HpnI~~l~ev~~t~~~~----------------~ivmEy~~gGdL~~~i~~~g-~l~E~~ar~~F~Qlis 131 (370)
T KOG0583|consen 69 EISILRRLRSHPNIIRLLEVFATPTKI----------------YIVMEYCSGGDLFDYIVNKG-RLKEDEARKYFRQLIS 131 (370)
T ss_pred HHHHHHHhccCCCEeEEEEEEecCCeE----------------EEEEEecCCccHHHHHHHcC-CCChHHHHHHHHHHHH
Confidence 445666777 99999998886644442 46999999999999999965 8999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecC-CcEEEeccccchhcc-ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQS-NQVKYIGPIIQKETL-ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~-~~vKLiDFGlar~~~-~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
||+|||++||+||||||+|||++.+ +++||+|||++.... ..
T Consensus 132 av~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~------------------------------------ 175 (370)
T KOG0583|consen 132 AVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGED------------------------------------ 175 (370)
T ss_pred HHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCC------------------------------------
Confidence 9999999999999999999999999 999999999987431 00
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
..+.+.+||+.|
T Consensus 176 --------------------------------------------------------------------~~l~t~cGsp~Y 187 (370)
T KOG0583|consen 176 --------------------------------------------------------------------GLLKTFCGSPAY 187 (370)
T ss_pred --------------------------------------------------------------------CcccCCCCCccc
Confidence 011467999999
Q ss_pred cCcccccCCC-CC-CccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcC-CCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 499 ASPEELSGGV-CT-TSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDR-ILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 499 ~APEvl~g~~-ys-~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~-~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
+|||++.+.. |+ .++||||+||+||.|++|+.||.+.. .+...+... ..-|.+.. ++.+.+|+.+||.+||.+|
T Consensus 188 ~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R 266 (370)
T KOG0583|consen 188 AAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTR 266 (370)
T ss_pred CCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccC
Confidence 9999999977 85 89999999999999999999996532 233334432 33344433 8889999999999999999
Q ss_pred CChhHHhhhHHHHhh
Q 002843 574 PTTREILQSEVTNEF 588 (874)
Q Consensus 574 PTa~EiL~hp~~~~~ 588 (874)
+++.+|+.||||+..
T Consensus 267 ~t~~~i~~h~w~~~~ 281 (370)
T KOG0583|consen 267 ITLLEILEHPWFQKE 281 (370)
T ss_pred CCHHHHhhChhhccC
Confidence 999999999999973
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=312.13 Aligned_cols=250 Identities=18% Similarity=0.194 Sum_probs=192.7
Q ss_pred ceEEEecCCCCccccccccccccccccc-CCChhHHHHHHHHhHHhhcCCCCCceeccceee---cCcccCCcCCCCCcc
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASNASPKPVGVGTAVVS---NGSLDLGARTGVPAS 298 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 298 (874)
.|+||+.. ....++.+..|+...+ +...+..+...+-++++...|+|++.+.+...- +...+
T Consensus 35 yGvVcsA~----~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D---------- 100 (359)
T KOG0660|consen 35 YGVVCSAK----DKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND---------- 100 (359)
T ss_pred eeeEEEEE----EcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce----------
Confidence 46777765 2333444555554433 557788889999999999999999988877543 22222
Q ss_pred ccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchh
Q 002843 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (874)
Q Consensus 299 ~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~ 378 (874)
-++|+|+|+ .+|.+.|+... .|++..+..+++||+.||.|+|+.||+||||||+|+|++.+..+||+|||+||.
T Consensus 101 ----vYiV~elMe-tDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~ 174 (359)
T KOG0660|consen 101 ----VYLVFELME-TDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARY 174 (359)
T ss_pred ----eEEehhHHh-hHHHHHHHcCc-cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceee
Confidence 368999995 89999998875 699999999999999999999999999999999999999999999999999985
Q ss_pred ccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCC
Q 002843 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (874)
Q Consensus 379 ~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~ 458 (874)
....
T Consensus 175 ~~~~---------------------------------------------------------------------------- 178 (359)
T KOG0660|consen 175 LDKF---------------------------------------------------------------------------- 178 (359)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 4300
Q ss_pred cccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHHH
Q 002843 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALAA 537 (874)
Q Consensus 459 ~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~ 537 (874)
.....+|..+.|+||+|||++.. ..|+.+.||||+||||.||++|++-|.....
T Consensus 179 -------------------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~ 233 (359)
T KOG0660|consen 179 -------------------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDY 233 (359)
T ss_pred -------------------------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCch
Confidence 00011267899999999999876 4599999999999999999999765521110
Q ss_pred -----------------HHH---------Hhhc-CCCC-----CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 538 -----------------AMS---------DLRD-RILP-----PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 538 -----------------~~~---------~l~~-~~lp-----p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
.+. .++. +..| ..|+..+|...+|+.+||..||.+|+|++|+|+|||+
T Consensus 234 v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl 313 (359)
T KOG0660|consen 234 VHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYL 313 (359)
T ss_pred HHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhh
Confidence 011 1111 1111 2356777899999999999999999999999999999
Q ss_pred HhhHhhhh
Q 002843 586 NEFQEVCA 593 (874)
Q Consensus 586 ~~~~~~~~ 593 (874)
....+...
T Consensus 314 ~~~hdp~d 321 (359)
T KOG0660|consen 314 APYHDPED 321 (359)
T ss_pred hhhcCCcc
Confidence 98876654
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=318.48 Aligned_cols=241 Identities=17% Similarity=0.196 Sum_probs=194.0
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHH--HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccc
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAAL--KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (874)
.+|+||||.. +. -.+..+.+++...+..++.. .-.+..+++..+|||++..++.......
T Consensus 14 sfg~VYKgrr----K~-t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~------------- 75 (808)
T KOG0597|consen 14 SFGRVYKGRR----KY-TIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAH------------- 75 (808)
T ss_pred ccceeeeccc----cc-ceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccce-------------
Confidence 4699999983 11 12334555666666555332 4556689999999999999887653322
Q ss_pred cCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhc
Q 002843 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (874)
Q Consensus 300 ~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~ 379 (874)
-++|.|||.| +|+.+|...+ .++++.++.|++|++.||.|||+.+|+|||+||.|||+...+.+|+||||+||.+
T Consensus 76 ---~~vVte~a~g-~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m 150 (808)
T KOG0597|consen 76 ---LWVVTEYAVG-DLFTILEQDG-KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAM 150 (808)
T ss_pred ---EEEEehhhhh-hHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhc
Confidence 2679999997 9999999887 8999999999999999999999999999999999999999999999999999855
Q ss_pred cccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCc
Q 002843 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (874)
Q Consensus 380 ~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~ 459 (874)
...
T Consensus 151 ~~~----------------------------------------------------------------------------- 153 (808)
T KOG0597|consen 151 STN----------------------------------------------------------------------------- 153 (808)
T ss_pred ccC-----------------------------------------------------------------------------
Confidence 410
Q ss_pred ccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--H
Q 002843 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--A 537 (874)
Q Consensus 460 ~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~ 537 (874)
+.-++...|||.|||||++.+++|+..+|+||||||||||++|.+||.... .
T Consensus 154 --------------------------t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~ 207 (808)
T KOG0597|consen 154 --------------------------TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQ 207 (808)
T ss_pred --------------------------ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 011257789999999999999999999999999999999999999996543 2
Q ss_pred HHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 538 AMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 538 ~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
....|.. ...||. ..+..+.+|+..+|.+||.+|.+..+++.|||.++-..
T Consensus 208 Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 208 LVKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred HHHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhh
Confidence 3444433 334443 45677999999999999999999999999999986443
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=295.27 Aligned_cols=244 Identities=15% Similarity=0.159 Sum_probs=185.7
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChh-HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
.||||||. -.+..+.++.|+.......-. ....+.+-.++....|++++++++...+.++..+
T Consensus 15 ~gvVyka~----d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~l------------ 78 (318)
T KOG0659|consen 15 YGVVYKAR----DTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSL------------ 78 (318)
T ss_pred eEEEEEEE----ecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEE------------
Confidence 58999997 223333344444333322111 2335566678888999999999999888887664
Q ss_pred CCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
|.||++ .+|...|+.....++..++..|+.+++.||+|||++.|+||||||.|+|++++|.+|++|||+++....
T Consensus 79 ----VfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 79 ----VFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred ----EEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 999998 799999998888999999999999999999999999999999999999999999999999999985441
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
..
T Consensus 154 p~------------------------------------------------------------------------------ 155 (318)
T KOG0659|consen 154 PN------------------------------------------------------------------------------ 155 (318)
T ss_pred CC------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCC-CCCccchhHHHHHHHHhcCCCCch---HHHHH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSE---RALAA 537 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~---~~~~~ 537 (874)
...+..+-|+||+|||.+.|.. |+..+||||.|||+.||+-|.+-| .+.+.
T Consensus 156 -------------------------~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQ 210 (318)
T KOG0659|consen 156 -------------------------RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQ 210 (318)
T ss_pred -------------------------cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHH
Confidence 0013447899999999999964 999999999999999999985544 22222
Q ss_pred HHHHhhc---------------------CCCC-----CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 538 AMSDLRD---------------------RILP-----PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 538 ~~~~l~~---------------------~~lp-----p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.-..++. ...| .-|......+.+|+.+||.+||.+|+|+.|+|+|+||.....
T Consensus 211 L~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~ 289 (318)
T KOG0659|consen 211 LSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPL 289 (318)
T ss_pred HHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCC
Confidence 1111110 0011 123444566789999999999999999999999999997543
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=321.50 Aligned_cols=214 Identities=15% Similarity=0.139 Sum_probs=177.4
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYI 334 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I 334 (874)
.+...+.+...|+...|+|+|.+++....... .++||||++||+|.+.+... .|+|.++..|
T Consensus 313 ~keLilnEi~Vm~~~~H~NiVnfl~Sylv~de----------------LWVVMEym~ggsLTDvVt~~--~~~E~qIA~I 374 (550)
T KOG0578|consen 313 KKELLLNEILVMRDLHHPNIVNFLDSYLVGDE----------------LWVVMEYMEGGSLTDVVTKT--RMTEGQIAAI 374 (550)
T ss_pred chhhhHHHHHHHHhccchHHHHHHHHhcccce----------------eEEEEeecCCCchhhhhhcc--cccHHHHHHH
Confidence 34556778888999999999999998665532 35699999999999999877 4999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+++++.||+|||.+||||||||.+|||+..+|.+||+|||+|..+...
T Consensus 375 cre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~-------------------------------- 422 (550)
T KOG0578|consen 375 CREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE-------------------------------- 422 (550)
T ss_pred HHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccc--------------------------------
Confidence 999999999999999999999999999999999999999998754410
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
+ ....+.+|
T Consensus 423 ---------------------------------------~--------------------------------~KR~TmVG 431 (550)
T KOG0578|consen 423 ---------------------------------------Q--------------------------------SKRSTMVG 431 (550)
T ss_pred ---------------------------------------c--------------------------------CccccccC
Confidence 0 01157899
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchH--HHHHHHHHhhcCCCC--CCCCCCCHHHHHHHHHccccCC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSER--ALAAAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~--~~~~~~~~l~~~~lp--p~~~~~~p~l~dLi~~cL~~dP 570 (874)
||+|||||+.....|++++||||||++++||+-|.+||- ....++.-+.....| ......++.+.+|+.+||..||
T Consensus 432 TPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv 511 (550)
T KOG0578|consen 432 TPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDV 511 (550)
T ss_pred CCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcch
Confidence 999999999999999999999999999999999999984 222233334332222 2234456889999999999999
Q ss_pred CCCCChhHHhhhHHHHhhH
Q 002843 571 LSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 571 ~~RPTa~EiL~hp~~~~~~ 589 (874)
.+|++|.|+|+||||+...
T Consensus 512 ~~RasA~eLL~HpFl~~a~ 530 (550)
T KOG0578|consen 512 EQRASAKELLEHPFLKMAK 530 (550)
T ss_pred hcCCCHHHHhcChhhhhcC
Confidence 9999999999999996433
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=295.17 Aligned_cols=210 Identities=16% Similarity=0.178 Sum_probs=175.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...++..+.+..||-++.........++.+ ++|||++||.|..||++.+ +|++..++.++.||
T Consensus 91 ~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly----------------mvmeyv~GGElFS~Lrk~~-rF~e~~arFYAAei 153 (355)
T KOG0616|consen 91 THNEKRVLKAVSHPFLVKLYGTFKDNSNLY----------------MVMEYVPGGELFSYLRKSG-RFSEPHARFYAAEI 153 (355)
T ss_pred HhhHHHHHhhccCceeEEEEEeeccCCeEE----------------EEEeccCCccHHHHHHhcC-CCCchhHHHHHHHH
Confidence 345667777888998888887766555544 5999999999999999987 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||+++|++|||||+||||+.+|.+||+|||+|+...+.
T Consensus 154 vlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r------------------------------------ 197 (355)
T KOG0616|consen 154 VLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR------------------------------------ 197 (355)
T ss_pred HHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc------------------------------------
Confidence 99999999999999999999999999999999999999854410
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
..+.||||.|
T Consensus 198 ----------------------------------------------------------------------T~TlCGTPeY 207 (355)
T KOG0616|consen 198 ----------------------------------------------------------------------TWTLCGTPEY 207 (355)
T ss_pred ----------------------------------------------------------------------EEEecCCccc
Confidence 1467999999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCC--
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSR-- 573 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~R-- 573 (874)
+|||++...+|+.++|.|||||++|||++|++||.+... ...+|.. ....|.+. ++.+.+|+.++|+.|-.+|
T Consensus 208 LAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~f--s~~~kdLl~~LL~vD~t~R~g 285 (355)
T KOG0616|consen 208 LAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYF--SSDAKDLLKKLLQVDLTKRFG 285 (355)
T ss_pred cChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCccc--CHHHHHHHHHHHhhhhHhhhc
Confidence 999999999999999999999999999999999954332 3344443 33333332 4678899999999999999
Q ss_pred ---CChhHHhhhHHHHhhHhhhh
Q 002843 574 ---PTTREILQSEVTNEFQEVCA 593 (874)
Q Consensus 574 ---PTa~EiL~hp~~~~~~~~~~ 593 (874)
....+|..||||+++.+...
T Consensus 286 nlknG~~dIk~H~wF~~v~W~~i 308 (355)
T KOG0616|consen 286 NLKNGVEDIKNHPWFKGVDWEAI 308 (355)
T ss_pred CcCCCccccccCcccccccHHHH
Confidence 45789999999998877654
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=286.60 Aligned_cols=214 Identities=19% Similarity=0.183 Sum_probs=181.0
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
...-.+...-+-..||+|+.+.+....++.|++ +.|+|+|++|..-|-++- .+++..+-++++
T Consensus 55 e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl----------------vFe~m~G~dl~~eIV~R~-~ySEa~aSH~~r 117 (355)
T KOG0033|consen 55 QKLEREARICRKLQHPNIVRLHDSIQEESFHYL----------------VFDLVTGGELFEDIVARE-FYSEADASHCIQ 117 (355)
T ss_pred HHHHHHHHHHHhcCCCcEeehhhhhcccceeEE----------------EEecccchHHHHHHHHHH-HHHHHHHHHHHH
Confidence 334445566777899999999999888888775 999999999998776653 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecC---CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQS---NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~---~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
||++||+|+|.+||||||+||+|+|+.+. --+||+|||+|.++.+. .
T Consensus 118 QiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g-~----------------------------- 167 (355)
T KOG0033|consen 118 QILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG-E----------------------------- 167 (355)
T ss_pred HHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCc-c-----------------------------
Confidence 99999999999999999999999999754 34999999999754410 0
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
.....+
T Consensus 168 --------------------------------------------------------------------------~~~G~~ 173 (355)
T KOG0033|consen 168 --------------------------------------------------------------------------AWHGFA 173 (355)
T ss_pred --------------------------------------------------------------------------cccccc
Confidence 013568
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcC---CCCCCCCCCCHHHHHHHHHcccc
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDR---ILPPSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~---~lpp~~~~~~p~l~dLi~~cL~~ 568 (874)
|||.|||||++...+|+.++|||+.|||||-|+.|++||.+ ....+..+..+ ..+|.+....+...+|+++||..
T Consensus 174 GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~ 253 (355)
T KOG0033|consen 174 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTV 253 (355)
T ss_pred CCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999954 44556666653 34567888899999999999999
Q ss_pred CCCCCCChhHHhhhHHHHhhHhh
Q 002843 569 EPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
||.+|+|+.|+|+|||+++-..+
T Consensus 254 dP~kRIta~EAL~HpWi~~r~~~ 276 (355)
T KOG0033|consen 254 NPKKRITADEALKHPWICNRERV 276 (355)
T ss_pred ChhhhccHHHHhCCchhcchHHH
Confidence 99999999999999999874433
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=311.72 Aligned_cols=212 Identities=20% Similarity=0.195 Sum_probs=169.9
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
.+.+-.+++...|||++.+...+...-.-. -++|.|||+ -||.-++...+-.|++.++.+|++||
T Consensus 163 ~~REI~ILr~l~HpNIikL~eivt~~~~~s--------------iYlVFeYMd-hDL~GLl~~p~vkft~~qIKc~mkQL 227 (560)
T KOG0600|consen 163 AIREIKILRRLDHPNIIKLEEIVTSKLSGS--------------IYLVFEYMD-HDLSGLLSSPGVKFTEPQIKCYMKQL 227 (560)
T ss_pred HHHHHHHHHhcCCCcccceeeEEEecCCce--------------EEEEEeccc-chhhhhhcCCCcccChHHHHHHHHHH
Confidence 455557899999999999988877551111 257999999 59999999988899999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+|||||.+||||+.+|.+||+|||||+....+
T Consensus 228 l~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~------------------------------------ 271 (560)
T KOG0600|consen 228 LEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS------------------------------------ 271 (560)
T ss_pred HHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCC------------------------------------
Confidence 99999999999999999999999999999999999999843300
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
....+|..+-|.||
T Consensus 272 ------------------------------------------------------------------~~~~~T~rVvTLWY 285 (560)
T KOG0600|consen 272 ------------------------------------------------------------------GSAPYTSRVVTLWY 285 (560)
T ss_pred ------------------------------------------------------------------CCcccccceEEeec
Confidence 00113678899999
Q ss_pred cCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHHHH-----HHHHhhcC---------CCC---------------
Q 002843 499 ASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERALAA-----AMSDLRDR---------ILP--------------- 548 (874)
Q Consensus 499 ~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~~~-----~~~~l~~~---------~lp--------------- 548 (874)
+|||++.|.. |+.++|+||+||||.||+.|++.+....+ .+..++.. .+|
T Consensus 286 RpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l 365 (560)
T KOG0600|consen 286 RPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRL 365 (560)
T ss_pred cChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchH
Confidence 9999999965 99999999999999999999887743322 12233321 111
Q ss_pred -CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 549 -PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 549 -p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
+.|....+...+|+..||..||.+|.||.++|+|+||..
T Consensus 366 ~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t 405 (560)
T KOG0600|consen 366 RETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT 405 (560)
T ss_pred HHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence 112233355779999999999999999999999999954
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=314.95 Aligned_cols=207 Identities=20% Similarity=0.236 Sum_probs=173.4
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
.+|+-..||+...+++...-+... +|+.||++||.|++||-..| +|++.++.++|+||+.||.
T Consensus 64 viMkLi~HpnVl~LydVwe~~~~l----------------ylvlEyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~ 126 (786)
T KOG0588|consen 64 VIMKLIEHPNVLRLYDVWENKQHL----------------YLVLEYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVS 126 (786)
T ss_pred HHHHHhcCCCeeeeeeeeccCceE----------------EEEEEecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHH
Confidence 567777899999998885533322 56999999999999999888 8999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
|||..+|+||||||+|+||+..+++||+|||+|..-..
T Consensus 127 yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~------------------------------------------ 164 (786)
T KOG0588|consen 127 YCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP------------------------------------------ 164 (786)
T ss_pred HHhhhcceeccCCchhhhhhcccCEeeeccceeecccC------------------------------------------
Confidence 99999999999999999999999999999999862110
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
..-+-+.||+|.|.|||+
T Consensus 165 --------------------------------------------------------------gklLeTSCGSPHYA~PEI 182 (786)
T KOG0588|consen 165 --------------------------------------------------------------GKLLETSCGSPHYAAPEI 182 (786)
T ss_pred --------------------------------------------------------------CccccccCCCcccCCchh
Confidence 001135689999999999
Q ss_pred ccCCCC-CCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHh
Q 002843 504 LSGGVC-TTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREIL 580 (874)
Q Consensus 504 l~g~~y-s~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL 580 (874)
+.|.+| +.++||||.|||||.||+|.-||++ ....+.+++++.+.-. ...++++.+||.+||..||++|+|++||+
T Consensus 183 V~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP-s~Is~eaQdLLr~ml~VDp~~RiT~~eI~ 261 (786)
T KOG0588|consen 183 VSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP-SNISSEAQDLLRRMLDVDPSTRITTEEIL 261 (786)
T ss_pred hcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC-CcCCHHHHHHHHHHhccCccccccHHHHh
Confidence 999998 6899999999999999999999964 3445666666554211 45568899999999999999999999999
Q ss_pred hhHHHHhhHhhh
Q 002843 581 QSEVTNEFQEVC 592 (874)
Q Consensus 581 ~hp~~~~~~~~~ 592 (874)
+|||+.+.....
T Consensus 262 kHP~l~g~~~~~ 273 (786)
T KOG0588|consen 262 KHPFLSGYTSLP 273 (786)
T ss_pred hCchhhcCCCCC
Confidence 999999755443
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=305.44 Aligned_cols=212 Identities=14% Similarity=0.114 Sum_probs=167.7
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.+......+.. .+++||||+|++|.+++...+ .+++.++..|+.|
T Consensus 41 ~~~~e~~~l~~l~hp~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~q 103 (323)
T cd05571 41 HTLTESRVLQNTRHPFLTALKYSFQTHDR----------------LCFVMEYANGGELFFHLSRER-VFSEDRARFYGAE 103 (323)
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEEcCCE----------------EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHH
Confidence 34456677788889998887766543332 256999999999999998765 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 104 i~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~----------------------------------- 148 (323)
T cd05571 104 IVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD----------------------------------- 148 (323)
T ss_pred HHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-----------------------------------
Confidence 999999999999999999999999999999999999998632100
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. ......+||+.
T Consensus 149 ------------------------~--------------------------------------------~~~~~~~gt~~ 160 (323)
T cd05571 149 ------------------------G--------------------------------------------ATMKTFCGTPE 160 (323)
T ss_pred ------------------------C--------------------------------------------CcccceecCcc
Confidence 0 00024578999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC-
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP- 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP- 574 (874)
|+|||++.+..|+.++|||||||++|||++|..||... ......+..... .......+.+.+||.+||+.||++||
T Consensus 161 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~ 239 (323)
T cd05571 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPKQRLG 239 (323)
T ss_pred ccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHccCCHHHcCC
Confidence 99999999988999999999999999999999998432 222222222211 11123457789999999999999999
Q ss_pred ----ChhHHhhhHHHHhhHh
Q 002843 575 ----TTREILQSEVTNEFQE 590 (874)
Q Consensus 575 ----Ta~EiL~hp~~~~~~~ 590 (874)
++.++++||||..+..
T Consensus 240 ~~~~~~~~ll~h~~f~~~~~ 259 (323)
T cd05571 240 GGPEDAKEIMEHRFFASINW 259 (323)
T ss_pred CCCCCHHHHHcCCCcCCCCH
Confidence 8999999999987643
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=316.25 Aligned_cols=461 Identities=18% Similarity=0.162 Sum_probs=336.7
Q ss_pred cccccc-cccccccccCCcccccccccccCCcccccccccCcccccCC---CCCCChhHHhhhhccCcccccccCCCCCC
Q 002843 4 MDEGVG-EVAPVNAAEGAPLQNKEIEYSLRPESCNNVLESGEMAIPEG---TSSDGSFQILADMLEGKSVNRIVSPMDAS 79 (874)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (874)
|+++.+ ++.++|.+...|.|.|..|.++++ +...++.-.+..+.++ ..|....+. ++ .+.
T Consensus 1 ~~~~~~~~~~~~e~~~~~q~~ik~~e~s~~~-~~~~~~~~~~~~~sr~a~~~e~~~~~~~--------~g-------~~~ 64 (516)
T KOG1033|consen 1 RNQEPVMERQRIERVATVQTQIKAREDSFPA-NKSKVRHNKRVITSREANDFEPGQCLGR--------GG-------FGV 64 (516)
T ss_pred CCCCCCCCcCccccceeeeeeeccccccccc-cccchhhhhhhhhhhhhccccccccccc--------cC-------ccc
Confidence 577888 999999999999999999999988 6778888888776665 333333222 22 222
Q ss_pred CCCCCCCCCCcCCceEEEeeeccCCCcceeeecCCcccccccc-ccccccceecCCCCCCCCCCCCCCCCcccccccccc
Q 002843 80 ENPCPHSDSDAGIMVEELTVRKSNSSNLAIVGTSNHRERISTR-HDRWQHLYQLGSGSGSGSSRGDRGHGRTMLGAWEDV 158 (874)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (874)
..+.+..+++.+..|++|||+||.+++..+++...+..+-.+- ..+..|.+..+.+.+....+........++...+++
T Consensus 65 ~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~~~~~~qe~~d~~~l~~~~~~~~~~l 144 (516)
T KOG1033|consen 65 VFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYERPPLGWQEEMDLKLLDDETSSERSNL 144 (516)
T ss_pred cCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceecCCCCcccchhhhhhhhccCCcchhcc
Confidence 3344668888899999999999999999999888877777766 458889999999988777776666777788999999
Q ss_pred CCCccccccc-cccccccchhHHHhhccccCCCccCccccCCCeeEEEeccCCchhHHHHhhcCCceEEEecCCCCcccc
Q 002843 159 GDTSLHDFIT-QKPLNDEHNTILEQSANTENDGLSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKE 237 (874)
Q Consensus 159 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~ 237 (874)
++.++++.-. |......-....++.......+++.+...+.+.-+.+++..++..+++.++..|++.-..|+.....+.
T Consensus 145 ~sl~~~~~~~~q~~~~~~~~~A~e~s~~~~~~~v~~~~~s~s~~~~~s~s~~~~~~~~~rk~s~~k~~~~~~~~~tdsd~ 224 (516)
T KOG1033|consen 145 PSLSERRTSKRQTAELPRVSAAAESSFHVFRAIVPVENQSHSQESSSSISQHNGSRSEFRKTSVSKASRFEGPDCTDSDL 224 (516)
T ss_pred ccccchhccchhhhhcccccccchhhhccccccCchhhcccCcccccchhhcccchhhhhhhhhccccccCCCccccccc
Confidence 9999998877 666677777777888888888899999999999999999999999999999999998888874222221
Q ss_pred cccccccccc---------------cccC-------CChhHHH--------HHHHHhHHhhcCCC-----CCceecccee
Q 002843 238 RRGMIDTKAF---------------VTTT-------MPSDAAL--------KAAGAMMVASNASP-----KPVGVGTAVV 282 (874)
Q Consensus 238 ~~~~~~~~~~---------------~~~~-------~~~d~~~--------~~~~~~l~~~~~~~-----~~~~~~~~~~ 282 (874)
.+....... .+.. ....+.. ......-+....+. .++...+...
T Consensus 225 -~ed~~~~~~s~~~~~~~~~~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~ 303 (516)
T KOG1033|consen 225 -EEDEMQGSDSKESSRHEESGSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSH 303 (516)
T ss_pred -cccccccCcccCcccccccccccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheecccc
Confidence 111111000 0000 0000000 00000000110000 0111122222
Q ss_pred ecCccc-----------CCcCCCCCccccCCCceEeeccCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002843 283 SNGSLD-----------LGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR--GHKGKRIECLYIFRQIVALVDYHHTQG 349 (874)
Q Consensus 283 ~~~~~~-----------~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~--~~~lse~e~~~I~~QIl~aL~yLHs~g 349 (874)
.++... +-+.+.. ..-.++.|++|+-.+|.+||..+ +...+...++.++.|+..|++| +|
T Consensus 304 ~~~s~~~d~~~s~~~~~~~~~v~~----~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~ 376 (516)
T KOG1033|consen 304 SNRSILEDLRPSLFESSKRNKVGK----KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG 376 (516)
T ss_pred CCcccccCCCCchhhhcccccccc----ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc
Confidence 221110 0000000 01145789999999999999643 3468888999999999999999 99
Q ss_pred CcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccccccc
Q 002843 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (874)
Q Consensus 350 IIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~ 429 (874)
.+|||+||.||++..+.++||.|||+........
T Consensus 377 ~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~---------------------------------------------- 410 (516)
T KOG1033|consen 377 LIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDE---------------------------------------------- 410 (516)
T ss_pred chhhhccccccccccchhhhhhhhhheeecccCC----------------------------------------------
Confidence 9999999999999999999999999865333000
Q ss_pred CCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCC
Q 002843 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC 509 (874)
Q Consensus 430 ~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~y 509 (874)
+........+..+||.|||+||++.+..|
T Consensus 411 ---------------------------------------------------~~~~~~a~~t~~~gt~~YmsPEQi~g~~y 439 (516)
T KOG1033|consen 411 ---------------------------------------------------TVAPAAASHTQQVGTLLYMSPEQIRGQQY 439 (516)
T ss_pred ---------------------------------------------------cccchhhhhhhcccccccCCHHHHhhhhh
Confidence 00011122367899999999999999999
Q ss_pred CCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 510 TTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 510 s~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
+.++||||||+|||||+.-|....+...++.+++++++||.+...+|....||.+||++.|.+||++.+.--|+|.
T Consensus 440 ~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 440 SEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred hhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 9999999999999999998888888888899999999999999999999999999999999999977666556553
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=300.48 Aligned_cols=222 Identities=16% Similarity=0.209 Sum_probs=166.3
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
+...+..++....||+++.+........... ....+++||||. ++|.+++.... .+++..+..++.|
T Consensus 45 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~-----------~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~q 111 (338)
T cd07859 45 RILREIKLLRLLRHPDIVEIKHIMLPPSRRE-----------FKDIYVVFELME-SDLHQVIKAND-DLTPEHHQFFLYQ 111 (338)
T ss_pred HHHHHHHHHHhCCCCCEeeecceEeccCCCC-----------CceEEEEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHH
Confidence 4455667788889999998876544222111 011368999996 69999998765 6999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 112 i~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~--------------------------------- 158 (338)
T cd07859 112 LLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP--------------------------------- 158 (338)
T ss_pred HHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC---------------------------------
Confidence 99999999999999999999999999999999999999874320000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
........+||++
T Consensus 159 -------------------------------------------------------------------~~~~~~~~~~t~~ 171 (338)
T cd07859 159 -------------------------------------------------------------------TAIFWTDYVATRW 171 (338)
T ss_pred -------------------------------------------------------------------ccccccCCCCCCC
Confidence 0000124578999
Q ss_pred ccCcccccC--CCCCCccchhHHHHHHHHhcCCCCchHHHHH-----H------------------------HHHhhcC-
Q 002843 498 YASPEELSG--GVCTTSSNIYSLGVLFFELFGRFDSERALAA-----A------------------------MSDLRDR- 545 (874)
Q Consensus 498 Y~APEvl~g--~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~-----~------------------------~~~l~~~- 545 (874)
|+|||++.+ ..++.++|||||||++|||++|.+||..... . +..+...
T Consensus 172 y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 251 (338)
T cd07859 172 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQ 251 (338)
T ss_pred cCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccC
Confidence 999999876 5689999999999999999999988732110 0 0011110
Q ss_pred --CCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 546 --ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 546 --~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
.+...+....+.+.+|+.+||..||++|||+.|+|+||||+.+....
T Consensus 252 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~ 300 (338)
T cd07859 252 PVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVE 300 (338)
T ss_pred CCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCccc
Confidence 01112334557788999999999999999999999999999866543
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=295.57 Aligned_cols=208 Identities=13% Similarity=0.155 Sum_probs=158.8
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.+......... .+++|||++| +|.+++...+..+++..+..++.|
T Consensus 49 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~----------------~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~q 111 (288)
T cd07871 49 TAIREVSLLKNLKHANIVTLHDIIHTERC----------------LTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQ 111 (288)
T ss_pred hHHHHHHHHHhCCCCCEeeEEEEEcCCCe----------------EEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHH
Confidence 34456677788899999988776543322 2569999985 999999876657899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 112 i~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~----------------------------------- 156 (288)
T cd07871 112 LLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP----------------------------------- 156 (288)
T ss_pred HHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC-----------------------------------
Confidence 999999999999999999999999999999999999988632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
........||+.
T Consensus 157 --------------------------------------------------------------------~~~~~~~~~~~~ 168 (288)
T cd07871 157 --------------------------------------------------------------------TKTYSNEVVTLW 168 (288)
T ss_pred --------------------------------------------------------------------CccccCceeccc
Confidence 000023467889
Q ss_pred ccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhh---cC-----------------CCCCC----
Q 002843 498 YASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLR---DR-----------------ILPPS---- 550 (874)
Q Consensus 498 Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~---~~-----------------~lpp~---- 550 (874)
|+|||++.+ ..++.++|||||||++|||++|.+||.... ..+..+. .. .+.+.
T Consensus 169 y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (288)
T cd07871 169 YRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQ 248 (288)
T ss_pred ccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCC
Confidence 999999876 458999999999999999999998873211 1111110 00 00011
Q ss_pred -----CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 551 -----FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 551 -----~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
.....+.+.+||.+||.+||.+|||+.|+|+||||
T Consensus 249 ~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 249 PLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred chHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 11234568899999999999999999999999997
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-32 Score=284.87 Aligned_cols=207 Identities=15% Similarity=0.165 Sum_probs=176.3
Q ss_pred HhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Q 002843 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL 342 (874)
..|-.-..||+|+++.+....+....+ |.|.|+.|.|++||...- .+++.+.+.|++||++|+
T Consensus 74 ~ILRqv~GHP~II~l~D~yes~sF~Fl----------------VFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegV 136 (411)
T KOG0599|consen 74 SILRQVMGHPYIIDLQDVYESDAFVFL----------------VFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGV 136 (411)
T ss_pred HHHHHhcCCCcEEEeeeeccCcchhhh----------------hhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHH
Confidence 356667889999999998776666554 899999999999998876 799999999999999999
Q ss_pred HHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 343 ~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
.|||.++||||||||+|||++++.++||+|||++..+..
T Consensus 137 eylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~----------------------------------------- 175 (411)
T KOG0599|consen 137 EYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEP----------------------------------------- 175 (411)
T ss_pred HHHHHhhhhhcccChhheeeccccceEEeccceeeccCC-----------------------------------------
Confidence 999999999999999999999999999999999875440
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
...+...+|||+|.|||
T Consensus 176 ---------------------------------------------------------------GekLrelCGTPgYLAPE 192 (411)
T KOG0599|consen 176 ---------------------------------------------------------------GEKLRELCGTPGYLAPE 192 (411)
T ss_pred ---------------------------------------------------------------chhHHHhcCCCcccChh
Confidence 01125779999999999
Q ss_pred cccC------CCCCCccchhHHHHHHHHhcCCCCchHHHHHH--HHHhhcC---CCCCCCCCCCHHHHHHHHHccccCCC
Q 002843 503 ELSG------GVCTTSSNIYSLGVLFFELFGRFDSERALAAA--MSDLRDR---ILPPSFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 503 vl~g------~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~--~~~l~~~---~lpp~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
.+.. ..|+..+|+||+|||+|.|+.|.+||...... +..+.++ .-.|.|...+....+||.+||+.||.
T Consensus 193 tikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~ 272 (411)
T KOG0599|consen 193 TIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPT 272 (411)
T ss_pred heeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCch
Confidence 9875 24899999999999999999999999765543 2334443 34677777888899999999999999
Q ss_pred CCCChhHHhhhHHHHhhHh
Q 002843 572 SRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~~~~~ 590 (874)
+|.|++|+|+||||..+-.
T Consensus 273 ~Ritake~LaHpff~q~~~ 291 (411)
T KOG0599|consen 273 KRITAKEALAHPFFIQIAQ 291 (411)
T ss_pred hcccHHHHhcChHHHHHHH
Confidence 9999999999999987653
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-33 Score=301.30 Aligned_cols=244 Identities=17% Similarity=0.146 Sum_probs=180.1
Q ss_pred eEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCC
Q 002843 224 GIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGG 303 (874)
Q Consensus 224 Gvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (874)
|+||+|.. -+..+.++.|+..... ..+-.+-..|+...|||+|.++-.....+..+ ..| .
T Consensus 38 g~Vyq~~~----~e~~~~vAIKKv~~d~-----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d--------~~~---l 97 (364)
T KOG0658|consen 38 GVVYQAKL----RETEEEVAIKKVLQDK-----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESD--------EVY---L 97 (364)
T ss_pred ceEEEEEE----cCCCceeEEEEecCCC-----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCc--------hhH---H
Confidence 88898872 3333334444333322 22333445667889999999877655433321 111 3
Q ss_pred ceEeeccCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC-CcEEEeccccchhc
Q 002843 304 LRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-NQVKYIGPIIQKET 379 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~-~~vKLiDFGlar~~ 379 (874)
++|||||+ .+|.++++. .+..++..+++-+.+||+.||+|||+.||+||||||.|+|++.+ |.+||||||.|+.+
T Consensus 98 nlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 98 NLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 68999999 799999985 24589999999999999999999999999999999999999977 89999999999855
Q ss_pred cccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCc
Q 002843 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (874)
Q Consensus 380 ~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~ 459 (874)
...
T Consensus 177 ~~~----------------------------------------------------------------------------- 179 (364)
T KOG0658|consen 177 VKG----------------------------------------------------------------------------- 179 (364)
T ss_pred ccC-----------------------------------------------------------------------------
Confidence 400
Q ss_pred ccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHH---H
Q 002843 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERA---L 535 (874)
Q Consensus 460 ~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~---~ 535 (874)
++ -.+...|+.|+|||.+.|.. |+++.||||.|||+.||+-|.+-|.+ .
T Consensus 180 ep---------------------------niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~ 232 (364)
T KOG0658|consen 180 EP---------------------------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV 232 (364)
T ss_pred CC---------------------------ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH
Confidence 00 03567789999999999965 99999999999999999999766522 2
Q ss_pred HHHHHH--hhc------------C-------CC-CC-----CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 536 AAAMSD--LRD------------R-------IL-PP-----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 536 ~~~~~~--l~~------------~-------~l-pp-----~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
...... +.. . .+ +. ......++..+|+.++|.++|.+|.++.|+|.||||+++
T Consensus 233 dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdel 312 (364)
T KOG0658|consen 233 DQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDEL 312 (364)
T ss_pred HHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHh
Confidence 211111 100 0 00 01 122345788999999999999999999999999999999
Q ss_pred Hhhh
Q 002843 589 QEVC 592 (874)
Q Consensus 589 ~~~~ 592 (874)
++..
T Consensus 313 r~~~ 316 (364)
T KOG0658|consen 313 RDPN 316 (364)
T ss_pred hCcC
Confidence 8774
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.5e-32 Score=313.62 Aligned_cols=218 Identities=20% Similarity=0.178 Sum_probs=174.3
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC---CCCCCHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYI 334 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~---~~~lse~e~~~I 334 (874)
....+..++....||+++.++.....++.. +++||||+||+|.++|... ...+++.++..+
T Consensus 111 ~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~----------------~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i 174 (478)
T PTZ00267 111 YARSELHCLAACDHFGIVKHFDDFKSDDKL----------------LLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLL 174 (478)
T ss_pred HHHHHHHHHHhCCCCCEeEEEEEEEECCEE----------------EEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHH
Confidence 344566788899999999999887655543 4599999999999988642 236899999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 175 ~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~------------------------------ 224 (478)
T PTZ00267 175 FYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS------------------------------ 224 (478)
T ss_pred HHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc------------------------------
Confidence 99999999999999999999999999999999999999999874320000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
.......+|
T Consensus 225 -----------------------------------------------------------------------~~~~~~~~g 233 (478)
T PTZ00267 225 -----------------------------------------------------------------------LDVASSFCG 233 (478)
T ss_pred -----------------------------------------------------------------------cccccccCC
Confidence 000034578
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
|+.|+|||++.+..++.++|||||||++|||++|..||... ...+..+.....++......+.+.+||.+||.++|++
T Consensus 234 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~ 313 (478)
T PTZ00267 234 TPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPAL 313 (478)
T ss_pred CccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhh
Confidence 99999999999988999999999999999999999998432 2233444434333333445678999999999999999
Q ss_pred CCChhHHhhhHHHHhhHhhh
Q 002843 573 RPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 573 RPTa~EiL~hp~~~~~~~~~ 592 (874)
||++.++|.|+|++......
T Consensus 314 Rps~~~~l~~~~~~~~~~~~ 333 (478)
T PTZ00267 314 RPTTQQLLHTEFLKYVANLF 333 (478)
T ss_pred CcCHHHHHhCHHHHHHHHHH
Confidence 99999999999998765443
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-32 Score=302.18 Aligned_cols=211 Identities=16% Similarity=0.140 Sum_probs=165.9
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+......+.. .+++||||+||+|.+++...+ .+++.++..++.
T Consensus 38 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~ 100 (312)
T cd05585 38 THTLAERTVLAQVNCPFIVPLKFSFQSPEK----------------LYLVLAFINGGELFHHLQREG-RFDLSRARFYTA 100 (312)
T ss_pred HHHHHHHHHHHhCCCCcEeceeeEEecCCe----------------EEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHH
Confidence 344556677788889999887765443322 257999999999999998765 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 101 qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~---------------------------------- 146 (312)
T cd05585 101 ELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD---------------------------------- 146 (312)
T ss_pred HHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC----------------------------------
Confidence 9999999999999999999999999999999999999987632100
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
. ......+||+
T Consensus 147 -------------------------~--------------------------------------------~~~~~~~gt~ 157 (312)
T cd05585 147 -------------------------D--------------------------------------------DKTNTFCGTP 157 (312)
T ss_pred -------------------------C--------------------------------------------CccccccCCc
Confidence 0 0002457899
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
.|+|||++.+..++.++|||||||++|||++|..||... ......+....+ .......+.+.+||.+||.+||.+||
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~ 236 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL-RFPDGFDRDAKDLLIGLLSRDPTRRL 236 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC-CCCCcCCHHHHHHHHHHcCCCHHHcC
Confidence 999999999988999999999999999999999998432 222223222211 11123457789999999999999997
Q ss_pred ---ChhHHhhhHHHHhh
Q 002843 575 ---TTREILQSEVTNEF 588 (874)
Q Consensus 575 ---Ta~EiL~hp~~~~~ 588 (874)
++.|+|.||||...
T Consensus 237 ~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 237 GYNGAQEIKNHPFFSQL 253 (312)
T ss_pred CCCCHHHHHcCCCcCCC
Confidence 57999999999865
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-32 Score=294.97 Aligned_cols=209 Identities=13% Similarity=0.086 Sum_probs=166.4
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..++....||+++.+......+.. .+++|||++|++|.+++...+ .+++..++.|+.||+
T Consensus 49 ~~E~~~l~~l~hp~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~ 111 (291)
T cd05612 49 HNEKRVLKEVSHPFIIRLFWTEHDQRF----------------LYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIV 111 (291)
T ss_pred HHHHHHHHhCCCCcHhhhHhhhccCCe----------------EEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 345567788889999888765443222 256999999999999998776 799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||++||+||||||+|||++.++.+||+|||+++...+.
T Consensus 112 ~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~------------------------------------- 154 (291)
T cd05612 112 CALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR------------------------------------- 154 (291)
T ss_pred HHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC-------------------------------------
Confidence 9999999999999999999999999999999999987632200
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.....||+.|+
T Consensus 155 ---------------------------------------------------------------------~~~~~gt~~y~ 165 (291)
T cd05612 155 ---------------------------------------------------------------------TWTLCGTPEYL 165 (291)
T ss_pred ---------------------------------------------------------------------cccccCChhhc
Confidence 01346788999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC--
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-- 575 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT-- 575 (874)
|||++.+..++.++|||||||++|||++|..||.... .....+...... ......+.+.+||.+||..||.+||+
T Consensus 166 aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~dp~~R~~~~ 244 (291)
T cd05612 166 APEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLE-FPRHLDLYAKDLIKKLLVVDRTRRLGNM 244 (291)
T ss_pred CHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcC-CCccCCHHHHHHHHHHcCCCHHHccCCc
Confidence 9999998889999999999999999999999984321 222333322211 11123577899999999999999995
Q ss_pred ---hhHHhhhHHHHhhHhhh
Q 002843 576 ---TREILQSEVTNEFQEVC 592 (874)
Q Consensus 576 ---a~EiL~hp~~~~~~~~~ 592 (874)
+.+++.||||+.+....
T Consensus 245 ~~~~~~~l~h~~~~~~~~~~ 264 (291)
T cd05612 245 KNGADDVKNHRWFKSVDWDD 264 (291)
T ss_pred cCCHHHHhcCccccCCCHHH
Confidence 99999999998766544
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.2e-33 Score=289.10 Aligned_cols=210 Identities=21% Similarity=0.236 Sum_probs=167.2
Q ss_pred HHhhcCCCCCceecccee--ecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC-CCCHHHHHHHHHHHHHH
Q 002843 265 MVASNASPKPVGVGTAVV--SNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVAL 341 (874)
Q Consensus 265 l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~-~lse~e~~~I~~QIl~a 341 (874)
-+..+.||++|.+++... +++..+ .++|||+|+||.|+..|+.++. .|++.++-.|++||+.|
T Consensus 108 Hw~~s~h~~iV~IidVyeNs~~~rkc--------------LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~A 173 (400)
T KOG0604|consen 108 HWMASGHPHIVSIIDVYENSYQGRKC--------------LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLA 173 (400)
T ss_pred hhhhcCCCceEEeehhhhhhccCcee--------------eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHH
Confidence 356788999998888633 222222 2689999999999999987653 79999999999999999
Q ss_pred HHHHHHCCCcccCCCCCceEEecC---CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 342 VDYHHTQGVTFLDLKPSSFKLLQS---NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 342 L~yLHs~gIIHRDLKPsNILL~~~---~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
|.|||+.+|.||||||+|+|.... ..+||+|||+|+...+.
T Consensus 174 v~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~------------------------------------ 217 (400)
T KOG0604|consen 174 VRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP------------------------------------ 217 (400)
T ss_pred HHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC------------------------------------
Confidence 999999999999999999999753 56999999999853310
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
..+.+.+-||+|
T Consensus 218 --------------------------------------------------------------------~~L~TPc~TPyY 229 (400)
T KOG0604|consen 218 --------------------------------------------------------------------GDLMTPCFTPYY 229 (400)
T ss_pred --------------------------------------------------------------------ccccCCcccccc
Confidence 001355778999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH-H-----HHHHhhcC---CCCCCCCCCCHHHHHHHHHccccC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA-A-----AMSDLRDR---ILPPSFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~-~-----~~~~l~~~---~lpp~~~~~~p~l~dLi~~cL~~d 569 (874)
.|||++...+|+..+|+||+||++|-|+||++||.... . +...++.+ ...|.|...+....++|+.+|..+
T Consensus 230 vaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~ 309 (400)
T KOG0604|consen 230 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTE 309 (400)
T ss_pred cCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCC
Confidence 99999998899999999999999999999999994211 1 12223322 223445555567889999999999
Q ss_pred CCCCCChhHHhhhHHHHhhHhhh
Q 002843 570 PLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 570 P~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
|.+|.|+.+++.|||++....+.
T Consensus 310 PteRlTI~~~m~hpwi~~~~~vp 332 (400)
T KOG0604|consen 310 PTERLTIEEVMDHPWINQYEAVP 332 (400)
T ss_pred chhheeHHHhhcCchhcccccCC
Confidence 99999999999999999876554
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-32 Score=302.20 Aligned_cols=207 Identities=14% Similarity=0.107 Sum_probs=167.7
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......+... +++||||.|++|.+++...+ .+++..+..++.||
T Consensus 65 ~~~E~~~l~~l~hp~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi 127 (329)
T PTZ00263 65 VAQEKSILMELSHPFIVNMMCSFQDENRV----------------YFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAEL 127 (329)
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEEcCCEE----------------EEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 44566778888999999988776544432 46999999999999998776 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++...+.
T Consensus 128 ~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~------------------------------------ 171 (329)
T PTZ00263 128 VLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR------------------------------------ 171 (329)
T ss_pred HHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC------------------------------------
Confidence 99999999999999999999999999999999999987632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.....||+.|
T Consensus 172 ----------------------------------------------------------------------~~~~~gt~~y 181 (329)
T PTZ00263 172 ----------------------------------------------------------------------TFTLCGTPEY 181 (329)
T ss_pred ----------------------------------------------------------------------cceecCChhh
Confidence 0134688999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC-
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT- 575 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT- 575 (874)
+|||++.+..++.++|||||||++|||++|..||... ......+....++ ......+.+.+||.+||+.||.+||+
T Consensus 182 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dP~~R~~~ 260 (329)
T PTZ00263 182 LAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLK-FPNWFDGRARDLVKGLLQTDHTKRLGT 260 (329)
T ss_pred cCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcC-CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 9999999988999999999999999999999998432 2233444433321 11124567889999999999999997
Q ss_pred ----hhHHhhhHHHHhhH
Q 002843 576 ----TREILQSEVTNEFQ 589 (874)
Q Consensus 576 ----a~EiL~hp~~~~~~ 589 (874)
+.+++.||||....
T Consensus 261 ~~~~~~~ll~hp~f~~~~ 278 (329)
T PTZ00263 261 LKGGVADVKNHPYFHGAN 278 (329)
T ss_pred CCCCHHHHhcCCccCCCC
Confidence 69999999998743
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=296.62 Aligned_cols=210 Identities=17% Similarity=0.123 Sum_probs=164.8
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+......++.. +++||||+|++|.+++.... .+++..+..++.
T Consensus 48 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ 110 (331)
T cd06649 48 NQIIRELQVLHECNSPYIVGFYGAFYSDGEI----------------SICMEHMDGGSLDQVLKEAK-RIPEEILGKVSI 110 (331)
T ss_pred HHHHHHHHHHHHCCCCCCCeEEEEEEECCEE----------------EEEeecCCCCcHHHHHHHcC-CCCHHHHHHHHH
Confidence 3455666778888999999998876644432 46999999999999998765 699999999999
Q ss_pred HHHHHHHHHHHC-CCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 337 QIVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 337 QIl~aL~yLHs~-gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 111 ~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------------------------------- 157 (331)
T cd06649 111 AVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--------------------------------- 157 (331)
T ss_pred HHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc---------------------------------
Confidence 999999999986 6999999999999999999999999987632200
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
......||
T Consensus 158 ------------------------------------------------------------------------~~~~~~g~ 165 (331)
T cd06649 158 ------------------------------------------------------------------------MANSFVGT 165 (331)
T ss_pred ------------------------------------------------------------------------ccccCCCC
Confidence 00234678
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc-----------------------------
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD----------------------------- 544 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~----------------------------- 544 (874)
+.|+|||++.+..++.++|||||||++|||++|..||.... .....+..
T Consensus 166 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (331)
T cd06649 166 RSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGM 245 (331)
T ss_pred cCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccccccccccc
Confidence 89999999999889999999999999999999998873211 11111110
Q ss_pred -----------------CCCCCC-CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 545 -----------------RILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 545 -----------------~~lpp~-~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
...+.. .....+.+.+||.+||.+||++|||+.|||+||||+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 246 DSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred ccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 001110 11234678999999999999999999999999999853
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.1e-32 Score=292.40 Aligned_cols=214 Identities=13% Similarity=0.113 Sum_probs=166.2
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~Q 337 (874)
...+..++....|++++.+......+.. .+++||||+||+|.+++... ...+++..++.++.|
T Consensus 47 ~~~E~~il~~l~~~~iv~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~q 110 (285)
T cd05631 47 ALNEKRILEKVNSRFVVSLAYAYETKDA----------------LCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAE 110 (285)
T ss_pred HHHHHHHHHhcCCCcEEEEEEEEccCCe----------------EEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHH
Confidence 4456677788889888877665443332 25799999999999988653 236999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 111 i~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----------------------------------- 155 (285)
T cd05631 111 LCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG----------------------------------- 155 (285)
T ss_pred HHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-----------------------------------
Confidence 999999999999999999999999999999999999987632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
......+||+.
T Consensus 156 ---------------------------------------------------------------------~~~~~~~g~~~ 166 (285)
T cd05631 156 ---------------------------------------------------------------------ETVRGRVGTVG 166 (285)
T ss_pred ---------------------------------------------------------------------CeecCCCCCCC
Confidence 00023468899
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH------HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA------AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~------~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
|+|||++.+..++.++|||||||+||||++|..||.... .....+.. .........++.+.+|+.+||..||.
T Consensus 167 y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~l~~~P~ 245 (285)
T cd05631 167 YMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE-DQEEYSEKFSEDAKSICRMLLTKNPK 245 (285)
T ss_pred ccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc-ccccCCccCCHHHHHHHHHHhhcCHH
Confidence 999999999899999999999999999999999985321 11111211 11111223457789999999999999
Q ss_pred CCCC-----hhHHhhhHHHHhhHhhhh
Q 002843 572 SRPT-----TREILQSEVTNEFQEVCA 593 (874)
Q Consensus 572 ~RPT-----a~EiL~hp~~~~~~~~~~ 593 (874)
+||+ ++++++||||..+.....
T Consensus 246 ~R~~~~~~~~~~~~~h~~~~~~~~~~~ 272 (285)
T cd05631 246 ERLGCRGNGAAGVKQHPIFKNINFKRL 272 (285)
T ss_pred HhcCCCCCCHHHHhcCHhhcCCCHHHH
Confidence 9997 899999999998765543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-32 Score=296.35 Aligned_cols=212 Identities=15% Similarity=0.195 Sum_probs=160.0
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...++...||+++.+......+.. .+++||||. ++|.+++......+++.++..++.||
T Consensus 50 ~~~E~~~l~~l~h~niv~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi 112 (303)
T cd07869 50 AIREASLLKGLKHANIVLLHDIIHTKET----------------LTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQL 112 (303)
T ss_pred HHHHHHHHhhCCCCCcCeEEEEEecCCe----------------EEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHH
Confidence 3445667778889999888766543322 257999996 68999887765579999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 113 ~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------------------------------------ 156 (303)
T cd07869 113 LRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP------------------------------------ 156 (303)
T ss_pred HHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC------------------------------------
Confidence 99999999999999999999999999999999999987632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
........||+.|
T Consensus 157 -------------------------------------------------------------------~~~~~~~~~~~~y 169 (303)
T cd07869 157 -------------------------------------------------------------------SHTYSNEVVTLWY 169 (303)
T ss_pred -------------------------------------------------------------------CccCCCCcccCCC
Confidence 0000234678999
Q ss_pred cCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH---HHHHhh---cCC--------------CCCCCC-----
Q 002843 499 ASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA---AMSDLR---DRI--------------LPPSFL----- 552 (874)
Q Consensus 499 ~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~---~~~~l~---~~~--------------lpp~~~----- 552 (874)
+|||++.+. .++.++|||||||+||||++|..||..... .+..+. ... .+..+.
T Consensus 170 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (303)
T cd07869 170 RPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPK 249 (303)
T ss_pred CChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCc
Confidence 999998764 488999999999999999999999843211 111110 000 000000
Q ss_pred ---------CCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 553 ---------SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 553 ---------~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
...+.+.+|+.+||++||++|||+.|+|+||||+.+..
T Consensus 250 ~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 250 NLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred cHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCCh
Confidence 11245779999999999999999999999999987643
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-32 Score=299.52 Aligned_cols=212 Identities=14% Similarity=0.104 Sum_probs=166.7
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.+......+... +++||||+|++|..++.... .+++.+++.|+.|
T Consensus 41 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~----------------~lv~Ey~~~g~L~~~l~~~~-~l~~~~~~~~~~q 103 (328)
T cd05593 41 HTLTESRVLKNTRHPFLTSLKYSFQTKDRL----------------CFVMEYVNGGELFFHLSRER-VFSEDRTRFYGAE 103 (328)
T ss_pred HHHHHHHHHHhCCCCCCcceEEEEEcCCEE----------------EEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHH
Confidence 345566778888899988877665543332 56999999999999998765 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 104 i~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~----------------------------------- 148 (328)
T cd05593 104 IVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD----------------------------------- 148 (328)
T ss_pred HHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc-----------------------------------
Confidence 999999999999999999999999999999999999987632100
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......+||+.
T Consensus 149 --------------------------------------------------------------------~~~~~~~~gt~~ 160 (328)
T cd05593 149 --------------------------------------------------------------------AATMKTFCGTPE 160 (328)
T ss_pred --------------------------------------------------------------------ccccccccCCcC
Confidence 000023468999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC-
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP- 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP- 574 (874)
|+|||++.+..++.++|||||||+||||++|..||... ......+..... .......+.+.+|+.+||.+||.+||
T Consensus 161 y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~ 239 (328)
T cd05593 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI-KFPRTLSADAKSLLSGLLIKDPNKRLG 239 (328)
T ss_pred ccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCc-cCCCCCCHHHHHHHHHHcCCCHHHcCC
Confidence 99999999888999999999999999999999998432 122222221111 11123457789999999999999997
Q ss_pred ----ChhHHhhhHHHHhhHh
Q 002843 575 ----TTREILQSEVTNEFQE 590 (874)
Q Consensus 575 ----Ta~EiL~hp~~~~~~~ 590 (874)
++.|+++||||.....
T Consensus 240 ~~~~~~~~il~h~~~~~~~~ 259 (328)
T cd05593 240 GGPDDAKEIMRHSFFTGVNW 259 (328)
T ss_pred CCCCCHHHHhcCCCcCCCCH
Confidence 8999999999987543
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=307.34 Aligned_cols=227 Identities=16% Similarity=0.130 Sum_probs=171.7
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC---CCCCCHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLY 333 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~---~~~lse~e~~~ 333 (874)
.+...+...+....|++++.......+...... .. . .-.+++|||++||+|.++|+.. ...+++.++..
T Consensus 76 ~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~---~~-~----~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~ 147 (496)
T PTZ00283 76 NRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP---EN-V----LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGL 147 (496)
T ss_pred HHHHHHHHHHhcCCCCcEEEeecceecccccCc---cc-c----eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHH
Confidence 344555566777788888876655443222110 00 0 0125799999999999999753 33799999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 148 i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~----------------------------- 198 (496)
T PTZ00283 148 LFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVS----------------------------- 198 (496)
T ss_pred HHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeecccccc-----------------------------
Confidence 999999999999999999999999999999999999999999874320000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
.......+
T Consensus 199 ------------------------------------------------------------------------~~~~~~~~ 206 (496)
T PTZ00283 199 ------------------------------------------------------------------------DDVGRTFC 206 (496)
T ss_pred ------------------------------------------------------------------------cccccccc
Confidence 00002457
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCC
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
||+.|+|||++.+..|+.++|||||||+||||++|..||... ...+..+.....++......+.+.+|+.+||+.||.
T Consensus 207 Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 286 (496)
T PTZ00283 207 GTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPK 286 (496)
T ss_pred CCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChh
Confidence 899999999999988999999999999999999999998432 223333333334343345567899999999999999
Q ss_pred CCCChhHHhhhHHHHhhHhhh
Q 002843 572 SRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~~~~~~~ 592 (874)
+||++.++|+|||+.......
T Consensus 287 ~RPs~~ell~~p~~~~~~~~~ 307 (496)
T PTZ00283 287 RRPSSSKLLNMPICKLFISGL 307 (496)
T ss_pred hCcCHHHHHhCHHHHHhhhhH
Confidence 999999999999998765443
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-32 Score=303.56 Aligned_cols=213 Identities=20% Similarity=0.195 Sum_probs=180.9
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~Q 337 (874)
..-+..|+....||++|...+..+.++..- |++|+||+||+|.+.|++. +..+++..+..||.|
T Consensus 50 A~~E~~lis~~~hP~iv~y~ds~~~~~~~l---------------~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q 114 (426)
T KOG0589|consen 50 AIQEMDLLSKLLHPNIVEYKDSFEEDGQLL---------------CIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQ 114 (426)
T ss_pred HHHHHHHHHhccCCCeeeeccchhcCCceE---------------EEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHH
Confidence 455667888899999999999988666511 4699999999999999764 358999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||+.+|+|||||+.||+++.++.|||.|||+|+.+..+..
T Consensus 115 ~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~--------------------------------- 161 (426)
T KOG0589|consen 115 ILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS--------------------------------- 161 (426)
T ss_pred HHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchh---------------------------------
Confidence 99999999999999999999999999999999999999996551100
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
-..+.+||+.
T Consensus 162 ----------------------------------------------------------------------~a~tvvGTp~ 171 (426)
T KOG0589|consen 162 ----------------------------------------------------------------------LASTVVGTPY 171 (426)
T ss_pred ----------------------------------------------------------------------hhheecCCCc
Confidence 0146799999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
||+||++.+.+|+.++|||||||++|||++-+++|.+ .......+......|........+..++..||..+|..||+
T Consensus 172 YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPs 251 (426)
T KOG0589|consen 172 YMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPS 251 (426)
T ss_pred ccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCC
Confidence 9999999999999999999999999999999888854 33445555555566666666788999999999999999999
Q ss_pred hhHHhhhHHHHhhH
Q 002843 576 TREILQSEVTNEFQ 589 (874)
Q Consensus 576 a~EiL~hp~~~~~~ 589 (874)
+.++|.+|.+....
T Consensus 252 a~~LL~~P~l~~~~ 265 (426)
T KOG0589|consen 252 ALELLRRPHLLRYL 265 (426)
T ss_pred HHHHhhChhhhhHH
Confidence 99999998887544
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-32 Score=298.54 Aligned_cols=208 Identities=16% Similarity=0.157 Sum_probs=166.3
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..++....||+++.++........ .+++||||+|++|.+++...+ .+++.+++.++.||+
T Consensus 49 ~~e~~~l~~~~h~~iv~~~~~~~~~~~----------------~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~ 111 (333)
T cd05600 49 LTERDILTTTKSEWLVKLLYAFQDDEY----------------LYLAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMF 111 (333)
T ss_pred HHHHHHHHhCCCCCCccEEEEEEcCCE----------------EEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 345556667779999988766553332 256999999999999998765 799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 112 ~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-------------------------------------- 153 (333)
T cd05600 112 EAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-------------------------------------- 153 (333)
T ss_pred HHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc--------------------------------------
Confidence 999999999999999999999999999999999998863220
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.....+||+.|+
T Consensus 154 --------------------------------------------------------------------~~~~~~gt~~y~ 165 (333)
T cd05600 154 --------------------------------------------------------------------YANSVVGSPDYM 165 (333)
T ss_pred --------------------------------------------------------------------ccCCcccCcccc
Confidence 002457889999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc---CCCCCCCC----CCCHHHHHHHHHccccCC
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD---RILPPSFL----SENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~---~~lpp~~~----~~~p~l~dLi~~cL~~dP 570 (874)
|||++.+..++.++|||||||+||||++|..||... ...+..+.. ....+... ..++.+.+|+.+||..+|
T Consensus 166 aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~ 245 (333)
T cd05600 166 APEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPS 245 (333)
T ss_pred ChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChh
Confidence 999999989999999999999999999999998432 122222222 11122222 346778999999999999
Q ss_pred CCCCChhHHhhhHHHHhhHh
Q 002843 571 LSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 571 ~~RPTa~EiL~hp~~~~~~~ 590 (874)
.+||++.++++||||.....
T Consensus 246 ~rr~s~~~ll~h~~~~~~~~ 265 (333)
T cd05600 246 RRFGSLEDIKNHPFFKEVDW 265 (333)
T ss_pred hhcCCHHHHHhCcccCCCCH
Confidence 99999999999999997543
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-32 Score=299.41 Aligned_cols=209 Identities=15% Similarity=0.165 Sum_probs=167.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......+... +++||||+|++|..++...+ .+++..++.++.||
T Consensus 42 ~~~E~~~l~~l~hp~i~~~~~~~~~~~~~----------------~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi 104 (323)
T cd05595 42 TVTESRVLQNTRHPFLTALKYAFQTHDRL----------------CFVMEYANGGELFFHLSRER-VFTEERARFYGAEI 104 (323)
T ss_pred HHHHHHHHHhCCCCCCcceeeEEecCCEE----------------EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 34456778888999998887766544332 56999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 105 ~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~------------------------------------ 148 (323)
T cd05595 105 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------------------------ 148 (323)
T ss_pred HHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC------------------------------------
Confidence 99999999999999999999999999999999999987632100
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
........||+.|
T Consensus 149 -------------------------------------------------------------------~~~~~~~~gt~~y 161 (323)
T cd05595 149 -------------------------------------------------------------------GATMKTFCGTPEY 161 (323)
T ss_pred -------------------------------------------------------------------CCccccccCCcCc
Confidence 0000234688999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcC--CCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDR--ILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~--~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
+|||++.+..++.++|||||||+||||++|..||... ......+... .+|. ...+.+.+||.+||..||.+||
T Consensus 162 ~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~ 238 (323)
T cd05595 162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRL 238 (323)
T ss_pred CCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHccCCHHHhC
Confidence 9999999889999999999999999999999998432 2222222221 1222 3457889999999999999998
Q ss_pred -----ChhHHhhhHHHHhhHh
Q 002843 575 -----TTREILQSEVTNEFQE 590 (874)
Q Consensus 575 -----Ta~EiL~hp~~~~~~~ 590 (874)
++.++++|+||.....
T Consensus 239 ~~~~~~~~~~l~h~~~~~~~~ 259 (323)
T cd05595 239 GGGPSDAKEVMEHRFFLSINW 259 (323)
T ss_pred CCCCCCHHHHHcCCCcCCCCH
Confidence 8999999999987553
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=294.26 Aligned_cols=207 Identities=16% Similarity=0.136 Sum_probs=155.6
Q ss_pred HHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--------------
Q 002843 259 KAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-------------- 323 (874)
Q Consensus 259 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-------------- 323 (874)
...+...+... .||+++.++......+.. .+++||||+||+|.++|....
T Consensus 57 ~~~E~~~l~~l~~h~niv~~~~~~~~~~~~---------------~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~ 121 (338)
T cd05102 57 LMSELKILIHIGNHLNVVNLLGACTKPNGP---------------LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQR 121 (338)
T ss_pred HHHHHHHHHHhccCcceeeEEeEecCCCCc---------------eEEEEecCCCCcHHHHHHhcchhcccccccchhhh
Confidence 34444455554 799999887754322211 256999999999999997531
Q ss_pred -----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 002843 324 -----------------------------------------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLK 356 (874)
Q Consensus 324 -----------------------------------------------~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLK 356 (874)
..+++.+++.|+.||+.||+|||++||+|||||
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiK 201 (338)
T cd05102 122 GRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLA 201 (338)
T ss_pred hhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCc
Confidence 247888999999999999999999999999999
Q ss_pred CCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCC
Q 002843 357 PSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGN 436 (874)
Q Consensus 357 PsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~ 436 (874)
|+|||++.++.+||+|||+++.+.....
T Consensus 202 p~Nil~~~~~~~kl~DfG~a~~~~~~~~---------------------------------------------------- 229 (338)
T cd05102 202 ARNILLSENNVVKICDFGLARDIYKDPD---------------------------------------------------- 229 (338)
T ss_pred cceEEEcCCCcEEEeecccccccccCcc----------------------------------------------------
Confidence 9999999999999999999874320000
Q ss_pred ccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchh
Q 002843 437 KIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIY 516 (874)
Q Consensus 437 ~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIw 516 (874)
. .......++..|+|||++.+..++.++|||
T Consensus 230 --------~-----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiw 260 (338)
T cd05102 230 --------Y-----------------------------------------VRKGSARLPLKWMAPESIFDKVYTTQSDVW 260 (338)
T ss_pred --------h-----------------------------------------hcccCCCCCccccCcHHhhcCCCCcccCHH
Confidence 0 000123456789999999988899999999
Q ss_pred HHHHHHHHhcC-CCCchHHH---HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 517 SLGVLFFELFG-RFDSERAL---AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 517 SLGVIL~ELlt-G~~p~~~~---~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
||||+||||++ |..||... ......+.....+.......+.+.+|+.+||+.||.+|||+.|+++
T Consensus 261 slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 261 SFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99999999996 88887532 1223334433333323345577999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-32 Score=300.35 Aligned_cols=209 Identities=13% Similarity=0.073 Sum_probs=169.3
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+.......+. .+++||||+||+|.+++.... .+++..+..++.||
T Consensus 78 ~~~E~~~l~~l~hp~Iv~~~~~~~~~~~----------------~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi 140 (340)
T PTZ00426 78 VFSERKILNYINHPFCVNLYGSFKDESY----------------LYLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQI 140 (340)
T ss_pred HHHHHHHHHhCCCCCCcceEEEEEeCCE----------------EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 4456678888889999988877554332 256999999999999998776 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus 141 ~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~------------------------------------- 183 (340)
T PTZ00426 141 VLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT------------------------------------- 183 (340)
T ss_pred HHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC-------------------------------------
Confidence 9999999999999999999999999999999999998763210
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......||+.|
T Consensus 184 ---------------------------------------------------------------------~~~~~~gt~~y 194 (340)
T PTZ00426 184 ---------------------------------------------------------------------RTYTLCGTPEY 194 (340)
T ss_pred ---------------------------------------------------------------------CcceecCChhh
Confidence 00234688999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCC-CCCCCCCCHHHHHHHHHccccCCCCCC-
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRIL-PPSFLSENPKEAGFCLWQLHPEPLSRP- 574 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~l-pp~~~~~~p~l~dLi~~cL~~dP~~RP- 574 (874)
+|||++.+..++.++|||||||++|||++|..||.... .....+..... .|. ...+.+.+|+.+||+.||.+|+
T Consensus 195 ~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~~l~~dp~~R~~ 272 (340)
T PTZ00426 195 IAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK--FLDNNCKHLMKKLLSHDLTKRYG 272 (340)
T ss_pred cCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCC--CCCHHHHHHHHHHcccCHHHcCC
Confidence 99999998889999999999999999999999985422 22333433322 121 2346788999999999999995
Q ss_pred ----ChhHHhhhHHHHhhHhhh
Q 002843 575 ----TTREILQSEVTNEFQEVC 592 (874)
Q Consensus 575 ----Ta~EiL~hp~~~~~~~~~ 592 (874)
++.++++||||..+.+..
T Consensus 273 ~~~~~~~~~~~hp~f~~~~~~~ 294 (340)
T PTZ00426 273 NLKKGAQNVKEHPWFGNIDWVS 294 (340)
T ss_pred CCCCCHHHHHcCCCcCCCCHHH
Confidence 899999999999866544
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=293.63 Aligned_cols=247 Identities=15% Similarity=0.114 Sum_probs=185.2
Q ss_pred eEEEecCCCCcccccccccccccccccCCCh-hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCC
Q 002843 224 GIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (874)
Q Consensus 224 Gvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (874)
++||++. |-.+.+..+++.+.-+... +....-.+...+.-..|||++.....++.+....
T Consensus 40 a~V~~A~-----c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LW-------------- 100 (516)
T KOG0582|consen 40 AVVYLAR-----CIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELW-------------- 100 (516)
T ss_pred eEeeeee-----ecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeE--------------
Confidence 5788875 2223344444433332222 2233444556778889999999999988776644
Q ss_pred CceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 303 GLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
+||.||.+|++.++|+..- ..|+|..+..|++++++||.|||.+|-||||||+.||||+.+|.|||+|||..-.+.+
T Consensus 101 --vVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 101 --VVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred --EeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 5999999999999998732 2599999999999999999999999999999999999999999999999998754431
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
++.
T Consensus 179 ~G~----------------------------------------------------------------------------- 181 (516)
T KOG0582|consen 179 SGD----------------------------------------------------------------------------- 181 (516)
T ss_pred cCc-----------------------------------------------------------------------------
Confidence 100
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC--CCCCCccchhHHHHHHHHhcCCCCchHH---HH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGRFDSERA---LA 536 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g--~~ys~kSDIwSLGVIL~ELltG~~p~~~---~~ 536 (874)
.....+...+||++|||||++.. ..|++|+||||||++..||.+|..||.. ..
T Consensus 182 ----------------------R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk 239 (516)
T KOG0582|consen 182 ----------------------RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK 239 (516)
T ss_pred ----------------------eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH
Confidence 00011135689999999999654 3599999999999999999999999843 44
Q ss_pred HHHHHhhcCCCCCCC--------CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 537 AAMSDLRDRILPPSF--------LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 537 ~~~~~l~~~~lpp~~--------~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
..+..|...+..+.. ......+..++..||..||.+||||.++|.|+||+....
T Consensus 240 vLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 240 VLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred HHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence 455566554432221 112235789999999999999999999999999997554
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-32 Score=296.68 Aligned_cols=201 Identities=15% Similarity=0.134 Sum_probs=160.2
Q ss_pred hcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002843 268 SNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT 347 (874)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs 347 (874)
...||+++.+......... .+++||||+||+|.+++.... .+++..+..++.||+.||+|||+
T Consensus 52 ~~~h~~iv~~~~~~~~~~~----------------~~iv~Ey~~~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH~ 114 (320)
T cd05590 52 ARNHPFLTQLYCCFQTPDR----------------LFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEITSALMFLHD 114 (320)
T ss_pred ccCCCchhceeeEEEcCCE----------------EEEEEcCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4468888888766543332 256999999999999998765 79999999999999999999999
Q ss_pred CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccccc
Q 002843 348 QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427 (874)
Q Consensus 348 ~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~ 427 (874)
+||+||||||+|||++.++.+||+|||+++.....
T Consensus 115 ~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--------------------------------------------- 149 (320)
T cd05590 115 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--------------------------------------------- 149 (320)
T ss_pred CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC---------------------------------------------
Confidence 99999999999999999999999999987632100
Q ss_pred ccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC
Q 002843 428 SLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG 507 (874)
Q Consensus 428 ~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~ 507 (874)
........||+.|+|||++.+.
T Consensus 150 ----------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~ 171 (320)
T cd05590 150 ----------------------------------------------------------GKTTSTFCGTPDYIAPEILQEM 171 (320)
T ss_pred ----------------------------------------------------------CCcccccccCccccCHHHHcCC
Confidence 0000244789999999999988
Q ss_pred CCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCC-CCCCCCCCCHHHHHHHHHccccCCCCCCCh------hH
Q 002843 508 VCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRPTT------RE 578 (874)
Q Consensus 508 ~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~-lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa------~E 578 (874)
.++.++|||||||++|||++|..||... ......+.... ..+ ....+.+.+|+.+||+.||.+||++ .+
T Consensus 172 ~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~ 249 (320)
T cd05590 172 LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP--TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEA 249 (320)
T ss_pred CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHH
Confidence 8999999999999999999999998432 22233333322 112 1245678999999999999999998 89
Q ss_pred HhhhHHHHhhHh
Q 002843 579 ILQSEVTNEFQE 590 (874)
Q Consensus 579 iL~hp~~~~~~~ 590 (874)
+++||||..+..
T Consensus 250 ~~~h~~f~~~~~ 261 (320)
T cd05590 250 ILRHPFFKELDW 261 (320)
T ss_pred HHcCCCcCCCCH
Confidence 999999987543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-32 Score=289.73 Aligned_cols=208 Identities=14% Similarity=0.122 Sum_probs=157.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......++. .+++||||+++.|..+....+ .+++..++.++.||
T Consensus 47 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi 109 (287)
T cd07848 47 TLRELKMLRTLKQENIVELKEAFRRRGK----------------LYLVFEYVEKNMLELLEEMPN-GVPPEKVRSYIYQL 109 (287)
T ss_pred HHHHHHHHHhCCCccccchhhhEecCCE----------------EEEEEecCCCCHHHHHHhcCC-CCCHHHHHHHHHHH
Confidence 3445567788889999888776553332 256999999887765554443 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 110 ~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~---------------------------------- 155 (287)
T cd07848 110 IKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN---------------------------------- 155 (287)
T ss_pred HHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc----------------------------------
Confidence 9999999999999999999999999999999999999864320000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......||+.|
T Consensus 156 --------------------------------------------------------------------~~~~~~~~~~~y 167 (287)
T cd07848 156 --------------------------------------------------------------------ANYTEYVATRWY 167 (287)
T ss_pred --------------------------------------------------------------------cccccccccccc
Confidence 000234678999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH---HH--HHHhhc------------------CCCCCC-----
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA---AA--MSDLRD------------------RILPPS----- 550 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~--~~~l~~------------------~~lpp~----- 550 (874)
+|||++.+..++.++|||||||++|||++|.+||.... .. +..+.. ...+..
T Consensus 168 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (287)
T cd07848 168 RSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQS 247 (287)
T ss_pred CCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCccc
Confidence 99999998889999999999999999999998884211 10 111100 000100
Q ss_pred -----CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 551 -----FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 551 -----~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
....++.+.+||.+||++||++|||+.|+|+||||
T Consensus 248 ~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 248 LERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred HHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 01134568899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-32 Score=290.54 Aligned_cols=219 Identities=17% Similarity=0.196 Sum_probs=164.9
Q ss_pred HHHHhHHhhcCCCC-CceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---CCCCHHHHHHHH
Q 002843 260 AAGAMMVASNASPK-PVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---HKGKRIECLYIF 335 (874)
Q Consensus 260 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---~~lse~e~~~I~ 335 (874)
+.+..++....|++ ++.+.+....+.++. +..--++++||++ -+|..|+.... ..++...++.++
T Consensus 58 iREisllk~L~~~~~iv~L~dv~~~~~~~~----------~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m 126 (323)
T KOG0594|consen 58 IREISLLKRLSHANHIVRLHDVIHTSNNHR----------GIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFM 126 (323)
T ss_pred hHHHHHHHHhCCCcceEEEEeeeeeccccc----------ccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHH
Confidence 34446788888888 777766655444311 1111357999998 79999998755 358889999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
+||+.||+|||+++|+||||||.||||+++|.+||+|||+|+...-
T Consensus 127 ~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~i---------------------------------- 172 (323)
T KOG0594|consen 127 RQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSI---------------------------------- 172 (323)
T ss_pred HHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcC----------------------------------
Confidence 9999999999999999999999999999999999999999983320
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
+....+..++|
T Consensus 173 ---------------------------------------------------------------------p~~~yt~evvT 183 (323)
T KOG0594|consen 173 ---------------------------------------------------------------------PMRTYTPEVVT 183 (323)
T ss_pred ---------------------------------------------------------------------CcccccccEEE
Confidence 00112577899
Q ss_pred ccccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHh--hc----CCCC------------CC---
Q 002843 496 KWYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDL--RD----RILP------------PS--- 550 (874)
Q Consensus 496 ~~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l--~~----~~lp------------p~--- 550 (874)
.||+|||++.|. .|++..||||+|||++||+++.+-|.... ...... .. ..+| +.
T Consensus 184 lWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~ 263 (323)
T KOG0594|consen 184 LWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPG 263 (323)
T ss_pred eeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCC
Confidence 999999999997 59999999999999999999866553222 211111 11 0000 00
Q ss_pred -------CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 551 -------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 551 -------~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
.....+...+++.+||.++|.+|.|+..+|.||||..+....
T Consensus 264 ~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~ 312 (323)
T KOG0594|consen 264 PKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKS 312 (323)
T ss_pred ccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccch
Confidence 111124578999999999999999999999999999876543
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=296.37 Aligned_cols=208 Identities=18% Similarity=0.179 Sum_probs=161.4
Q ss_pred HHhHHhh-cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 262 GAMMVAS-NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 262 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
+..++.. ..||+++.+......+... +++||||+||+|.+++.+.+ .+++..++.|+.||+.
T Consensus 45 e~~il~~~~~hp~Iv~~~~~~~~~~~~----------------~lv~e~~~~g~L~~~~~~~~-~l~~~~~~~~~~qi~~ 107 (329)
T cd05588 45 EKHVFETASNHPFLVGLHSCFQTESRL----------------FFVIEFVSGGDLMFHMQRQR-KLPEEHARFYSAEISL 107 (329)
T ss_pred HHHHHHhccCCCCCCceEEEEEcCCEE----------------EEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHH
Confidence 3344433 4789998887665433322 56999999999999997765 7999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 108 ~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-------------------------------------- 149 (329)
T cd05588 108 ALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-------------------------------------- 149 (329)
T ss_pred HHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccC--------------------------------------
Confidence 999999999999999999999999999999999987631100
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
.......+||+.|+|
T Consensus 150 -----------------------------------------------------------------~~~~~~~~gt~~y~a 164 (329)
T cd05588 150 -----------------------------------------------------------------GDTTSTFCGTPNYIA 164 (329)
T ss_pred -----------------------------------------------------------------CCccccccCCccccC
Confidence 000024578999999
Q ss_pred cccccCCCCCCccchhHHHHHHHHhcCCCCchHHH-----------HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccC
Q 002843 501 PEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL-----------AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 501 PEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~-----------~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~d 569 (874)
||++.+..++.++|||||||++|||++|..||... ......+.....+ .....++.+.+||.+||..|
T Consensus 165 PE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~li~~~L~~d 243 (329)
T cd05588 165 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR-IPRSLSVKASSVLKGFLNKD 243 (329)
T ss_pred HHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC-CCCCCCHHHHHHHHHHhccC
Confidence 99999989999999999999999999999998421 1112222222211 11234577899999999999
Q ss_pred CCCCCC------hhHHhhhHHHHhhHh
Q 002843 570 PLSRPT------TREILQSEVTNEFQE 590 (874)
Q Consensus 570 P~~RPT------a~EiL~hp~~~~~~~ 590 (874)
|.+||+ +.++++||||..+..
T Consensus 244 P~~R~~~~~~~~~~~i~~hp~~~~~~~ 270 (329)
T cd05588 244 PKERLGCHPQTGFRDIKSHPFFRNIDW 270 (329)
T ss_pred HHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 999997 689999999976543
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=286.69 Aligned_cols=213 Identities=18% Similarity=0.196 Sum_probs=163.8
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFR 336 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I~~ 336 (874)
..+..++....|++++.+......+.. .+++||||+||+|..++.. ....+++..++.++.
T Consensus 41 ~~E~~il~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~ 104 (280)
T cd05608 41 MVEKRILAKVHSRFIVSLAYAFQTKTD----------------LCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTA 104 (280)
T ss_pred HHHHHHHHhCCCCcEeeeeEEEcCCCe----------------EEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHH
Confidence 445567778889888887665443322 2579999999999998853 233699999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.+....
T Consensus 105 qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--------------------------------- 151 (280)
T cd05608 105 QIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--------------------------------- 151 (280)
T ss_pred HHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC---------------------------------
Confidence 99999999999999999999999999999999999999876332000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......||+
T Consensus 152 ----------------------------------------------------------------------~~~~~~~g~~ 161 (280)
T cd05608 152 ----------------------------------------------------------------------SKTKGYAGTP 161 (280)
T ss_pred ----------------------------------------------------------------------ccccccCCCc
Confidence 0002346788
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCC--CCC-CCCCHHHHHHHHHccccCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILP--PSF-LSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lp--p~~-~~~~p~l~dLi~~cL~~dP~ 571 (874)
.|+|||++.+..++.++|||||||++|||++|..||..... ....+....+. ..+ ....+.+.+|+.+||+.||+
T Consensus 162 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 241 (280)
T cd05608 162 GFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPE 241 (280)
T ss_pred CccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHH
Confidence 99999999999999999999999999999999999853211 11112221111 111 23456789999999999999
Q ss_pred CCC-----ChhHHhhhHHHHhhHhh
Q 002843 572 SRP-----TTREILQSEVTNEFQEV 591 (874)
Q Consensus 572 ~RP-----Ta~EiL~hp~~~~~~~~ 591 (874)
+|| ++.++++||||+...+.
T Consensus 242 ~R~~~~~~~~~~~l~h~~~~~~~~~ 266 (280)
T cd05608 242 KRLGFRDGNCDGLRTHPLFRDLNWR 266 (280)
T ss_pred HhcCCCCCCHHHHhcChhhhcCCHh
Confidence 999 88999999999986543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-32 Score=298.13 Aligned_cols=213 Identities=15% Similarity=0.121 Sum_probs=166.6
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.+......+.. .+++||||+|++|..++.... .+++.+++.|+.|
T Consensus 41 ~~~~e~~~l~~~~hp~i~~~~~~~~~~~~----------------~~lv~E~~~~~~L~~~l~~~~-~l~~~~~~~~~~q 103 (325)
T cd05594 41 HTLTENRVLQNSRHPFLTALKYSFQTHDR----------------LCFVMEYANGGELFFHLSRER-VFSEDRARFYGAE 103 (325)
T ss_pred HHHHHHHHHHhCCCCCCCceEEEEEcCCE----------------EEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHH
Confidence 34555667788889998887766553332 257999999999999997765 7999999999999
Q ss_pred HHHHHHHHHH-CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 338 IVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 338 Il~aL~yLHs-~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
|+.||+|||+ +||+||||||+|||++.++.+||+|||+++.....
T Consensus 104 i~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~---------------------------------- 149 (325)
T cd05594 104 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD---------------------------------- 149 (325)
T ss_pred HHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC----------------------------------
Confidence 9999999998 79999999999999999999999999987632100
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
........||+
T Consensus 150 ---------------------------------------------------------------------~~~~~~~~gt~ 160 (325)
T cd05594 150 ---------------------------------------------------------------------GATMKTFCGTP 160 (325)
T ss_pred ---------------------------------------------------------------------CcccccccCCc
Confidence 00002346899
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
.|+|||++.+..++.++|||||||+||||++|..||... ......+...... ......+.+.+|+.+||..||++|+
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dP~~R~ 239 (325)
T cd05594 161 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR-FPRTLSPEAKSLLSGLLKKDPKQRL 239 (325)
T ss_pred ccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCC-CCCCCCHHHHHHHHHHhhcCHHHhC
Confidence 999999999988999999999999999999999998432 1222222221111 1123457889999999999999997
Q ss_pred -----ChhHHhhhHHHHhhHhh
Q 002843 575 -----TTREILQSEVTNEFQEV 591 (874)
Q Consensus 575 -----Ta~EiL~hp~~~~~~~~ 591 (874)
++.++|+||||......
T Consensus 240 ~~~~~~~~~il~h~~~~~~~~~ 261 (325)
T cd05594 240 GGGPDDAKEIMQHKFFAGIVWQ 261 (325)
T ss_pred CCCCCCHHHHhcCCCcCCCCHH
Confidence 89999999999875543
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=294.75 Aligned_cols=209 Identities=16% Similarity=0.123 Sum_probs=163.3
Q ss_pred HHHHhHHh-hcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 260 AAGAMMVA-SNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 260 ~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
..+..++. ...||+++.+......+.. .+++||||+|++|..++...+ .+++..+..++.||
T Consensus 43 ~~e~~il~~~~~hp~i~~~~~~~~~~~~----------------~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi 105 (321)
T cd05591 43 MTEKRILALAAKHPFLTALHCCFQTKDR----------------LFFVMEYVNGGDLMFQIQRSR-KFDEPRSRFYAAEV 105 (321)
T ss_pred HHHHHHHHhccCCCCccceeeEEEcCCe----------------EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 33444443 4578888888776554333 256999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 106 ~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~----------------------------------- 150 (321)
T cd05591 106 TLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG----------------------------------- 150 (321)
T ss_pred HHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCC-----------------------------------
Confidence 999999999999999999999999999999999999876321000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......||+.|
T Consensus 151 --------------------------------------------------------------------~~~~~~~gt~~y 162 (321)
T cd05591 151 --------------------------------------------------------------------VTTTTFCGTPDY 162 (321)
T ss_pred --------------------------------------------------------------------ccccccccCccc
Confidence 000234688999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCCC-
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRP- 574 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP- 574 (874)
+|||++.+..++.++|||||||++|||++|..||... ...+..+.. ....|. ...+.+.+|+.+||+.||++||
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~ll~~~L~~dp~~R~~ 240 (321)
T cd05591 163 IAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPV--WLSKEAVSILKAFMTKNPNKRLG 240 (321)
T ss_pred cCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhccCHHHcCC
Confidence 9999999888999999999999999999999998432 222333333 222222 2356788999999999999999
Q ss_pred ------ChhHHhhhHHHHhhHh
Q 002843 575 ------TTREILQSEVTNEFQE 590 (874)
Q Consensus 575 ------Ta~EiL~hp~~~~~~~ 590 (874)
++.++++||||.....
T Consensus 241 ~~~~~~~~~~~~~hp~~~~~~~ 262 (321)
T cd05591 241 CVASQGGEDAIKQHPFFKEIDW 262 (321)
T ss_pred CCCCCCCHHHHhcCCccCCCCH
Confidence 8999999999976543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-31 Score=296.52 Aligned_cols=211 Identities=19% Similarity=0.206 Sum_probs=174.1
Q ss_pred HHHHHHhHHhhcC-CCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 258 LKAAGAMMVASNA-SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 258 ~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
..-.+...+.... ||++|.+.+........ +++||+|.||.|.+.|.+. .+++.++..+++
T Consensus 81 ~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~----------------~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~ 142 (382)
T KOG0032|consen 81 DVRREVAILQQLSGHPNIVQLKDAFEDPDSV----------------YLVMELCEGGELFDRIVKK--HYSERDAAGIIR 142 (382)
T ss_pred HHHHHHHHHHhccCCCCEEEEEEEEEcCCeE----------------EEEEEecCCchHHHHHHHc--cCCHHHHHHHHH
Confidence 3334445566666 99999999987766543 3599999999999999877 399999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecC----CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQS----NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~----~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
||+.++.|||+.||+||||||+|||+... +.+|++|||++.....
T Consensus 143 ~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~------------------------------- 191 (382)
T KOG0032|consen 143 QILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP------------------------------- 191 (382)
T ss_pred HHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC-------------------------------
Confidence 99999999999999999999999999754 4799999999874330
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
...+...
T Consensus 192 -------------------------------------------------------------------------~~~~~~~ 198 (382)
T KOG0032|consen 192 -------------------------------------------------------------------------GERLHTI 198 (382)
T ss_pred -------------------------------------------------------------------------CceEeee
Confidence 0012467
Q ss_pred cccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcC---CCCCCCCCCCHHHHHHHHHccc
Q 002843 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDR---ILPPSFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 493 ~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~---~lpp~~~~~~p~l~dLi~~cL~ 567 (874)
+||+.|+|||++.+.+|+..+||||+||++|.|++|.+||.... .....+... ...+.|...+..+.+|+..||.
T Consensus 199 ~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~ 278 (382)
T KOG0032|consen 199 VGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLE 278 (382)
T ss_pred cCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcc
Confidence 99999999999999899999999999999999999999995543 233334332 3456677778889999999999
Q ss_pred cCCCCCCChhHHhhhHHHHhhHh
Q 002843 568 PEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.||..|+|+.++|+|||++....
T Consensus 279 ~dp~~R~ta~~~L~HpWi~~~~~ 301 (382)
T KOG0032|consen 279 FDPRKRLTAAQALQHPWIKSIGE 301 (382)
T ss_pred cCcccCCCHHHHhcCccccCCcc
Confidence 99999999999999999887543
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=294.53 Aligned_cols=206 Identities=15% Similarity=0.141 Sum_probs=161.2
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
.+.....||+++.++.....+.. .+++||||+||+|.+++...+ .+++.++..|+.||+.||.
T Consensus 48 ~l~~~~~hp~i~~~~~~~~~~~~----------------~~lv~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~ 110 (316)
T cd05592 48 VLALAWEHPFLTHLFCTFQTKEH----------------LFFVMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQ 110 (316)
T ss_pred HHHhccCCCCccceeeEEEcCCE----------------EEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHH
Confidence 34445578998888766553332 256999999999999998766 7999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 111 ~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~----------------------------------------- 149 (316)
T cd05592 111 FLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG----------------------------------------- 149 (316)
T ss_pred HHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC-----------------------------------------
Confidence 999999999999999999999999999999998632200
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
. ......+||+.|+|||+
T Consensus 150 ------------------~--------------------------------------------~~~~~~~gt~~y~aPE~ 167 (316)
T cd05592 150 ------------------E--------------------------------------------GKASTFCGTPDYIAPEI 167 (316)
T ss_pred ------------------C--------------------------------------------CccccccCCccccCHHH
Confidence 0 00024578999999999
Q ss_pred ccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChh-HHh
Q 002843 504 LSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR-EIL 580 (874)
Q Consensus 504 l~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~-EiL 580 (874)
+.+..++.++|||||||++|||++|..||... ......+.... +.........+.+|+.+||+.||++||++. +++
T Consensus 168 ~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 168 LKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDR-PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 99988999999999999999999999998432 22223333221 111122456788999999999999999874 888
Q ss_pred hhHHHHhhHh
Q 002843 581 QSEVTNEFQE 590 (874)
Q Consensus 581 ~hp~~~~~~~ 590 (874)
+||||.....
T Consensus 247 ~h~~~~~~~~ 256 (316)
T cd05592 247 QHPFFRGIDW 256 (316)
T ss_pred cCcccCCCCH
Confidence 9999987543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-32 Score=300.08 Aligned_cols=241 Identities=18% Similarity=0.197 Sum_probs=183.8
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHHHHHHHH-hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGA-MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
+|.||||..+..-+ ..+.+.+.-+...|.+..+..+ .++....++++...+.........
T Consensus 26 fG~Vyk~~d~~t~k-----~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~L-------------- 86 (467)
T KOG0201|consen 26 FGEVYKAIDNKTKK-----VVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKL-------------- 86 (467)
T ss_pred cceeeeeeeccccc-----eEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccH--------------
Confidence 38888887432222 2233333333334444444333 566667777777777765544443
Q ss_pred CCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
+++||||.||++.+.|+..+ .+.+.++..|+++++.||.|||.++.+|||||+.|||+..+|.+|++|||++-.+..
T Consensus 87 --wiiMey~~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~ 163 (467)
T KOG0201|consen 87 --WIIMEYCGGGSVLDLLKSGN-ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTN 163 (467)
T ss_pred --HHHHHHhcCcchhhhhccCC-CCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeec
Confidence 34899999999999998876 569999999999999999999999999999999999999999999999998754331
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
..
T Consensus 164 ~~------------------------------------------------------------------------------ 165 (467)
T KOG0201|consen 164 TV------------------------------------------------------------------------------ 165 (467)
T ss_pred hh------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSD 541 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~ 541 (874)
....+.+|||.|||||++.+..|+.++||||||++.+||++|-+|+..... |..
T Consensus 166 -------------------------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP-mrv 219 (467)
T KOG0201|consen 166 -------------------------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP-MRV 219 (467)
T ss_pred -------------------------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc-ceE
Confidence 000366999999999999988899999999999999999999999865443 222
Q ss_pred h--hcCCCCCCCCCCC-HHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 542 L--RDRILPPSFLSEN-PKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 542 l--~~~~lpp~~~~~~-p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+ -....||.+...+ +.+++|+..||.+||+.||+|.++|+|+|++...
T Consensus 220 lflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 220 LFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred EEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 1 2244566655544 6699999999999999999999999999999733
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=294.36 Aligned_cols=203 Identities=17% Similarity=0.142 Sum_probs=159.9
Q ss_pred hhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Q 002843 267 ASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHH 346 (874)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLH 346 (874)
....||+++.++.....++.. +++||||.|++|..++...+ .+++.++..++.||+.||+|||
T Consensus 51 ~~~~~~~i~~~~~~~~~~~~~----------------~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH 113 (316)
T cd05620 51 LAWENPFLTHLYCTFQTKEHL----------------FFVMEFLNGGDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLH 113 (316)
T ss_pred hccCCCCccCeeEEEEeCCEE----------------EEEECCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 345788888877765544332 46999999999999998765 7999999999999999999999
Q ss_pred HCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccc
Q 002843 347 TQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRW 426 (874)
Q Consensus 347 s~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~ 426 (874)
++||+||||||+|||++.++.+||+|||+++.....
T Consensus 114 ~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-------------------------------------------- 149 (316)
T cd05620 114 SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-------------------------------------------- 149 (316)
T ss_pred HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC--------------------------------------------
Confidence 999999999999999999999999999987621100
Q ss_pred cccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC
Q 002843 427 WSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG 506 (874)
Q Consensus 427 ~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g 506 (874)
. ......+||+.|+|||++.+
T Consensus 150 ---------------~--------------------------------------------~~~~~~~gt~~y~aPE~~~~ 170 (316)
T cd05620 150 ---------------D--------------------------------------------NRASTFCGTPDYIAPEILQG 170 (316)
T ss_pred ---------------C--------------------------------------------CceeccCCCcCccCHHHHcC
Confidence 0 00024568999999999999
Q ss_pred CCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh-hHHhhhH
Q 002843 507 GVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-REILQSE 583 (874)
Q Consensus 507 ~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa-~EiL~hp 583 (874)
..++.++|||||||++|||++|..||... ......+.... +.......+.+.+|+.+||+.||++||++ .++++||
T Consensus 171 ~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~ 249 (316)
T cd05620 171 LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT-PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHP 249 (316)
T ss_pred CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCC
Confidence 89999999999999999999999998432 22233333221 11111245778999999999999999998 5888999
Q ss_pred HHHhhHh
Q 002843 584 VTNEFQE 590 (874)
Q Consensus 584 ~~~~~~~ 590 (874)
||+....
T Consensus 250 ~f~~~~~ 256 (316)
T cd05620 250 FFKTINW 256 (316)
T ss_pred CcCCCCH
Confidence 9987543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=295.28 Aligned_cols=208 Identities=18% Similarity=0.144 Sum_probs=158.9
Q ss_pred HHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 262 GAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 262 ~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
+..++... .|++++.+......++. .+++||||+||+|.+++..++ .+++.+++.++.||+.
T Consensus 54 e~~~l~~l~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~ 116 (332)
T cd05614 54 ERNVLEHVRQSPFLVTLHYAFQTEAK----------------LHLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIIL 116 (332)
T ss_pred HHHHHHhccCCCCcccEEEEEecCCE----------------EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHH
Confidence 34444444 57777777655443322 256999999999999998765 7999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 117 ~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~------------------------------------ 160 (332)
T cd05614 117 ALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK------------------------------------ 160 (332)
T ss_pred HHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC------------------------------------
Confidence 99999999999999999999999999999999999863220000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
.......||+.|+|
T Consensus 161 ------------------------------------------------------------------~~~~~~~gt~~y~a 174 (332)
T cd05614 161 ------------------------------------------------------------------ERTYSFCGTIEYMA 174 (332)
T ss_pred ------------------------------------------------------------------CccccccCCccccC
Confidence 00023468999999
Q ss_pred cccccCCC-CCCccchhHHHHHHHHhcCCCCchHH------HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 501 PEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERA------LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 501 PEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~------~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
||++.+.. ++.++|||||||+||||++|..||.. .......+.. ..++......+.+.+|+.+||+.||++|
T Consensus 175 PE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~R 253 (332)
T cd05614 175 PEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK-CDPPFPSFIGPEAQDLLHKLLRKDPKKR 253 (332)
T ss_pred HHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc-CCCCCCCCCCHHHHHHHHHHcCCCHHHc
Confidence 99998754 78999999999999999999999842 1111122221 1122222345778999999999999999
Q ss_pred C-----ChhHHhhhHHHHhhH
Q 002843 574 P-----TTREILQSEVTNEFQ 589 (874)
Q Consensus 574 P-----Ta~EiL~hp~~~~~~ 589 (874)
| ++.++++||||+...
T Consensus 254 ~~~~~~~~~~~l~h~~~~~~~ 274 (332)
T cd05614 254 LGAGPQGASEIKEHPFFKGLD 274 (332)
T ss_pred CCCCCCCHHHHHcCCCcCCCC
Confidence 9 788999999998754
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-31 Score=284.42 Aligned_cols=206 Identities=17% Similarity=0.141 Sum_probs=154.3
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL 342 (874)
..+....||+++.+.+......... ....+++|||+. ++|.+++... ...+++.+++.|+.||+.||
T Consensus 56 ~~l~~~~hpniv~~~~~~~~~~~~~-----------~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL 123 (290)
T cd07862 56 RHLETFEHPNVVRLFDVCTVSRTDR-----------ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 123 (290)
T ss_pred HhhcccCCCCcceEEEEEecccCCC-----------CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 3444557999998876643211100 011367999997 6999999763 23589999999999999999
Q ss_pred HHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 343 ~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 124 ~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------- 163 (290)
T cd07862 124 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---------------------------------------- 163 (290)
T ss_pred HHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC----------------------------------------
Confidence 9999999999999999999999999999999988632200
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
.......||+.|+|||
T Consensus 164 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 179 (290)
T cd07862 164 ----------------------------------------------------------------MALTSVVVTLWYRAPE 179 (290)
T ss_pred ----------------------------------------------------------------cccccccccccccChH
Confidence 0002446889999999
Q ss_pred cccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc---CCCCCC-----------------------CCCC
Q 002843 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD---RILPPS-----------------------FLSE 554 (874)
Q Consensus 503 vl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~---~~lpp~-----------------------~~~~ 554 (874)
++.+..++.++|||||||++|||++|.+||.... ..+..+.. ...+.. ....
T Consensus 180 ~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (290)
T cd07862 180 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDI 259 (290)
T ss_pred HHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCC
Confidence 9998889999999999999999999999884311 11111111 000000 1123
Q ss_pred CHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 555 NPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 555 ~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
.+.+.+|+.+||++||++|||+.|+|+||||
T Consensus 260 ~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 260 DELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred CHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 4567899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=294.63 Aligned_cols=182 Identities=16% Similarity=0.172 Sum_probs=147.4
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccc
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESA 383 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~ 383 (874)
+++||||+||+|.+++...+ .+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 77 ~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~- 154 (324)
T cd05587 77 YFVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG- 154 (324)
T ss_pred EEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC-
Confidence 57999999999999998766 6999999999999999999999999999999999999999999999999987521100
Q ss_pred cCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccccc
Q 002843 384 SLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHT 463 (874)
Q Consensus 384 ~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~ 463 (874)
.
T Consensus 155 ----------------------------------------------------------~--------------------- 155 (324)
T cd05587 155 ----------------------------------------------------------G--------------------- 155 (324)
T ss_pred ----------------------------------------------------------C---------------------
Confidence 0
Q ss_pred ccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHH
Q 002843 464 NAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSD 541 (874)
Q Consensus 464 ~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~ 541 (874)
......+||+.|+|||++.+..++.++|||||||++|||++|..||... ...+..
T Consensus 156 -----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~ 212 (324)
T cd05587 156 -----------------------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQS 212 (324)
T ss_pred -----------------------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0002456899999999999989999999999999999999999998432 222333
Q ss_pred hhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh-----hHHhhhHHHHhhHh
Q 002843 542 LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNEFQE 590 (874)
Q Consensus 542 l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa-----~EiL~hp~~~~~~~ 590 (874)
+..... .......+.+.+||.+||++||.+|+++ .++++||||..+..
T Consensus 213 i~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~ 265 (324)
T cd05587 213 IMEHNV-SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDW 265 (324)
T ss_pred HHcCCC-CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 332211 1112345778899999999999999987 79999999987543
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=289.08 Aligned_cols=226 Identities=20% Similarity=0.221 Sum_probs=181.5
Q ss_pred cccccccccccccCCCh---hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCC
Q 002843 238 RRGMIDTKAFVTTTMPS---DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVN 314 (874)
Q Consensus 238 ~~~~~~~~~~~~~~~~~---d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~Ggs 314 (874)
+.+...+++.++.+.-. |....-.+-..|.+..||+||.++..+.-.... .+||||..||.
T Consensus 76 ~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKI----------------vivMEYaS~Ge 139 (668)
T KOG0611|consen 76 KSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKI----------------VIVMEYASGGE 139 (668)
T ss_pred cCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceE----------------EEEEEecCCcc
Confidence 44555666666665433 333344455789999999999998886622221 46999999999
Q ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhh
Q 002843 315 LREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYR 394 (874)
Q Consensus 315 L~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~ 394 (874)
|.+||..++ .|++.++++||+||+.|+.|||.++|+|||||.+||||+.++++||+|||++....+.
T Consensus 140 LYDYiSer~-~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~------------ 206 (668)
T KOG0611|consen 140 LYDYISERG-SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK------------ 206 (668)
T ss_pred HHHHHHHhc-cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc------------
Confidence 999999887 7999999999999999999999999999999999999999999999999997533200
Q ss_pred hhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCC
Q 002843 395 LRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSS 474 (874)
Q Consensus 395 ~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~ 474 (874)
T Consensus 207 -------------------------------------------------------------------------------- 206 (668)
T KOG0611|consen 207 -------------------------------------------------------------------------------- 206 (668)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccccccccccccccccccccCcccccCCCC-CCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCC-CCC
Q 002843 475 SPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRIL-PPS 550 (874)
Q Consensus 475 ~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~y-s~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~l-pp~ 550 (874)
.-+++.+|+|.|.+||++.|.+| ++.+|-|||||+||.|+.|..||+.. ...+..+..+.. .|.
T Consensus 207 ------------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~ 274 (668)
T KOG0611|consen 207 ------------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE 274 (668)
T ss_pred ------------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC
Confidence 11257799999999999999998 68999999999999999999999653 344555554433 222
Q ss_pred CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 551 ~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
. ......||+|||..||++|.|+.+|-.|=|++-
T Consensus 275 ~---PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 275 T---PSDASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred C---CchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 1 234678999999999999999999999999884
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=294.45 Aligned_cols=205 Identities=16% Similarity=0.133 Sum_probs=163.1
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
.++....||+++.+......+.. .+++||||+|++|.+++...+ .+++..+..++.||+.||+
T Consensus 48 ~~~~~l~hp~iv~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~ 110 (323)
T cd05575 48 VLLKNVKHPFLVGLHYSFQTADK----------------LYFVLDYVNGGELFFHLQRER-SFPEPRARFYAAEIASALG 110 (323)
T ss_pred HHHhhCCCCCCCCeeEEEEeCCE----------------EEEEEcCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Confidence 45677889999988766543332 256999999999999998765 7999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 111 ~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~----------------------------------------- 149 (323)
T cd05575 111 YLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH----------------------------------------- 149 (323)
T ss_pred HHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-----------------------------------------
Confidence 999999999999999999999999999999987632100
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
. ......+||+.|+|||+
T Consensus 150 ------------------~--------------------------------------------~~~~~~~gt~~y~aPE~ 167 (323)
T cd05575 150 ------------------S--------------------------------------------KTTSTFCGTPEYLAPEV 167 (323)
T ss_pred ------------------C--------------------------------------------CccccccCChhhcChhh
Confidence 0 00024568999999999
Q ss_pred ccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh----h
Q 002843 504 LSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT----R 577 (874)
Q Consensus 504 l~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa----~ 577 (874)
+.+..++.++|||||||++|||++|..||... ......+....+. ......+.+.+||.+||+.||.+||++ .
T Consensus 168 ~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (323)
T cd05575 168 LRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLR-LKPNISVSARHLLEGLLQKDRTKRLGAKDDFL 246 (323)
T ss_pred hcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHH
Confidence 99989999999999999999999999998432 2223333332211 112346778999999999999999998 5
Q ss_pred HHhhhHHHHhhH
Q 002843 578 EILQSEVTNEFQ 589 (874)
Q Consensus 578 EiL~hp~~~~~~ 589 (874)
++++||||....
T Consensus 247 ~il~~~~~~~~~ 258 (323)
T cd05575 247 EIKNHVFFSSIN 258 (323)
T ss_pred HHHcCCCcCCCC
Confidence 999999997644
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=296.76 Aligned_cols=207 Identities=18% Similarity=0.150 Sum_probs=158.9
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....|++++.++.....++.. +++||||+|++|.... .+++..+..|+.|
T Consensus 118 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~q 176 (353)
T PLN00034 118 QICREIEILRDVNHPNVVKCHDMFDHNGEI----------------QVLLEFMDGGSLEGTH-----IADEQFLADVARQ 176 (353)
T ss_pred HHHHHHHHHHhCCCCCcceeeeEeccCCeE----------------EEEEecCCCCcccccc-----cCCHHHHHHHHHH
Confidence 344566778888899999887765533332 4699999999986532 4678889999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.+...
T Consensus 177 i~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~----------------------------------- 221 (353)
T PLN00034 177 ILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT----------------------------------- 221 (353)
T ss_pred HHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc-----------------------------------
Confidence 999999999999999999999999999999999999998633200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. ......+||..
T Consensus 222 -----------------------~---------------------------------------------~~~~~~~gt~~ 233 (353)
T PLN00034 222 -----------------------M---------------------------------------------DPCNSSVGTIA 233 (353)
T ss_pred -----------------------c---------------------------------------------ccccccccCcc
Confidence 0 00023468899
Q ss_pred ccCcccccC-----CCCCCccchhHHHHHHHHhcCCCCchHH-----HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccc
Q 002843 498 YASPEELSG-----GVCTTSSNIYSLGVLFFELFGRFDSERA-----LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 498 Y~APEvl~g-----~~ys~kSDIwSLGVIL~ELltG~~p~~~-----~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~ 567 (874)
|+|||++.. ..++.++|||||||++|||++|..||.. ....+..+.....+.......+.+.+||.+||+
T Consensus 234 y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 313 (353)
T PLN00034 234 YMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQ 313 (353)
T ss_pred ccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHcc
Confidence 999998853 2245799999999999999999998842 122222222222333334456789999999999
Q ss_pred cCCCCCCChhHHhhhHHHHhh
Q 002843 568 PEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~~~~ 588 (874)
.||++||++.|+|+||||...
T Consensus 314 ~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 314 REPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred CChhhCcCHHHHhcCcccccC
Confidence 999999999999999999874
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=298.73 Aligned_cols=249 Identities=13% Similarity=0.091 Sum_probs=169.5
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..++....||+++.++.....+... +++||||+||+|.+++...+ .+++.+++.|+.||+
T Consensus 49 ~~E~~il~~l~h~~iv~~~~~~~~~~~~----------------~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~ 111 (364)
T cd05599 49 RAERDILAEADNPWVVKLYYSFQDENYL----------------YLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETI 111 (364)
T ss_pred HHHHHHHHhCCCCCCcceEEEEEcCCeE----------------EEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 3455677777899999887765543332 56999999999999998766 799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||++||+||||||+|||++.++.+||+|||+++.+........ ......
T Consensus 112 ~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~--------------------------~~~~~~ 165 (364)
T cd05599 112 LAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEF--------------------------YRILSH 165 (364)
T ss_pred HHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccc--------------------------cccccc
Confidence 999999999999999999999999999999999999875431100000 000000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
. ...+. ++........ ......+. ... .......+||+.|+
T Consensus 166 ~-----------~~~~~---------------~~~~~~~~~~--~~~~~~~~----------~~~-~~~~~~~~gt~~y~ 206 (364)
T cd05599 166 A-----------LPSNF---------------LDFISKPMSS--KRKAETWK----------RNR-RALAYSTVGTPDYI 206 (364)
T ss_pred c-----------ccccc---------------cccccccccc--cccccchh----------hcc-cccccccccCcccc
Confidence 0 00000 0000000000 00000000 000 00113468999999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcC---CCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDR---ILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~---~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|||++.+..++.++|||||||++|||++|..||.... .....+... ...+.....++.+.+||.+||. +|.+|+
T Consensus 207 aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~ 285 (364)
T cd05599 207 APEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRL 285 (364)
T ss_pred CHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcC
Confidence 9999998889999999999999999999999984321 222223221 1112223446788999999996 999999
Q ss_pred C---hhHHhhhHHHHhhHhh
Q 002843 575 T---TREILQSEVTNEFQEV 591 (874)
Q Consensus 575 T---a~EiL~hp~~~~~~~~ 591 (874)
+ +.|+|+||||+.....
T Consensus 286 ~~~~~~~ll~h~~~~~~~~~ 305 (364)
T cd05599 286 GNNGVNEIKSHPFFKGVDWE 305 (364)
T ss_pred CCCCHHHHhcCCCcCCCCHH
Confidence 7 9999999999876543
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=290.41 Aligned_cols=212 Identities=16% Similarity=0.179 Sum_probs=154.3
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC--------CCCCCHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR--------GHKGKRIE 330 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~--------~~~lse~e 330 (874)
...+..++....||+++.+........... .+++|||+. ++|.+++... ...+++..
T Consensus 45 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--------------~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~ 109 (317)
T cd07868 45 ACREIALLRELKHPNVISLQKVFLSHADRK--------------VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGM 109 (317)
T ss_pred HHHHHHHHHhcCCCCCcceeeeEecCCCcE--------------EEEEEeccC-CCHHHHHHhcccccccCCcccCCHHH
Confidence 344667788889999998876654222211 267999997 5999988642 12589999
Q ss_pred HHHHHHHHHHHHHHHHHCCCcccCCCCCceEEe----cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhcc
Q 002843 331 CLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL----QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFT 406 (874)
Q Consensus 331 ~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~----~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg 406 (874)
++.|+.||+.||+|||++||+||||||+|||+. ..+.+||+|||+++......
T Consensus 110 ~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~----------------------- 166 (317)
T cd07868 110 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL----------------------- 166 (317)
T ss_pred HHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCC-----------------------
Confidence 999999999999999999999999999999994 55789999999986432000
Q ss_pred ccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccc
Q 002843 407 TGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQS 486 (874)
Q Consensus 407 ~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~ 486 (874)
...
T Consensus 167 -----------------------------------------------------------------------------~~~ 169 (317)
T cd07868 167 -----------------------------------------------------------------------------KPL 169 (317)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred cccccccccccccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHH-----------HHHHHhhc----------
Q 002843 487 TSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALA-----------AAMSDLRD---------- 544 (874)
Q Consensus 487 ~~~t~~~GT~~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~-----------~~~~~l~~---------- 544 (874)
......+||++|+|||++.+. .++.++|||||||++|||++|.+||.... ..+..+..
T Consensus 170 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (317)
T cd07868 170 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDW 249 (317)
T ss_pred cccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHh
Confidence 001345789999999999874 58999999999999999999998873111 00000000
Q ss_pred ------------------CCC---------CCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 545 ------------------RIL---------PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 545 ------------------~~l---------pp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
... ........+.+.+||.+||++||.+|||+.|+|+||||
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 250 EDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 000 00011123457899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=292.81 Aligned_cols=209 Identities=19% Similarity=0.167 Sum_probs=167.0
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......++.. +++|||+.|++|.+++.+.+ .+++..+..++.||
T Consensus 47 ~~~E~~il~~l~hp~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi 109 (323)
T cd05584 47 TKAERNILEAVKHPFIVDLIYAFQTGGKL----------------YLILEYLSGGELFMHLEREG-IFMEDTACFYLSEI 109 (323)
T ss_pred HHHHHHHHHhCCCCchhceeeEEecCCeE----------------EEEEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 34566778888999999887766544432 46999999999999998876 78999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 110 ~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------------------- 154 (323)
T cd05584 110 SLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG----------------------------------- 154 (323)
T ss_pred HHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-----------------------------------
Confidence 999999999999999999999999999999999999876322000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......||+.|
T Consensus 155 --------------------------------------------------------------------~~~~~~~gt~~y 166 (323)
T cd05584 155 --------------------------------------------------------------------TVTHTFCGTIEY 166 (323)
T ss_pred --------------------------------------------------------------------CcccccCCCccc
Confidence 000234688999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC--
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-- 574 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP-- 574 (874)
+|||++.+..++.++|||||||+||||++|..||... ...+..+..... +......+.+.+||.+||+++|++||
T Consensus 167 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~ 245 (323)
T cd05584 167 MAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL-NLPPYLTPEARDLLKKLLKRNPSSRLGA 245 (323)
T ss_pred cChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHcccCHhHcCCC
Confidence 9999999888999999999999999999999998432 222333333221 11123457789999999999999999
Q ss_pred ---ChhHHhhhHHHHhh
Q 002843 575 ---TTREILQSEVTNEF 588 (874)
Q Consensus 575 ---Ta~EiL~hp~~~~~ 588 (874)
++.++++||||...
T Consensus 246 ~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 246 GPGDAAEVQSHPFFRHV 262 (323)
T ss_pred CCCCHHHHhcCCCcCCC
Confidence 89999999999864
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=294.68 Aligned_cols=204 Identities=19% Similarity=0.178 Sum_probs=159.9
Q ss_pred HhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Q 002843 266 VASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYH 345 (874)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yL 345 (874)
.....||+++.+......++.. +++||||+|++|..++...+ .+++..++.|+.||+.||+||
T Consensus 50 ~~~~~hp~iv~~~~~~~~~~~~----------------~lv~E~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~l 112 (329)
T cd05618 50 EQASNHPFLVGLHSCFQTESRL----------------FFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYL 112 (329)
T ss_pred HhcCCCCcCCceeeEEEeCCEE----------------EEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH
Confidence 3445799999888765544332 56999999999999997765 799999999999999999999
Q ss_pred HHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccc
Q 002843 346 HTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSR 425 (874)
Q Consensus 346 Hs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~ 425 (874)
|++||+||||||+|||++.++.+||+|||+++......
T Consensus 113 H~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~------------------------------------------ 150 (329)
T cd05618 113 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG------------------------------------------ 150 (329)
T ss_pred HHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC------------------------------------------
Confidence 99999999999999999999999999999976321000
Q ss_pred ccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccccc
Q 002843 426 WWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS 505 (874)
Q Consensus 426 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~ 505 (874)
......+||+.|+|||++.
T Consensus 151 -------------------------------------------------------------~~~~~~~gt~~y~aPE~~~ 169 (329)
T cd05618 151 -------------------------------------------------------------DTTSTFCGTPNYIAPEILR 169 (329)
T ss_pred -------------------------------------------------------------CccccccCCccccCHHHHc
Confidence 0002457899999999999
Q ss_pred CCCCCCccchhHHHHHHHHhcCCCCchHH-----------HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 506 GGVCTTSSNIYSLGVLFFELFGRFDSERA-----------LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 506 g~~ys~kSDIwSLGVIL~ELltG~~p~~~-----------~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
+..++.++|||||||++|||++|..||.. .......+..... .......+.+.+||.+||+.||.+||
T Consensus 170 ~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~ll~~~L~~dP~~R~ 248 (329)
T cd05618 170 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERL 248 (329)
T ss_pred CCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHhcCCHHHcC
Confidence 98999999999999999999999999831 1111222222111 11123457788999999999999999
Q ss_pred Ch------hHHhhhHHHHhhHh
Q 002843 575 TT------REILQSEVTNEFQE 590 (874)
Q Consensus 575 Ta------~EiL~hp~~~~~~~ 590 (874)
++ .++++||||.....
T Consensus 249 ~~~~~~~~~~i~~hp~f~~~~~ 270 (329)
T cd05618 249 GCHPQTGFADIQGHPFFRNVDW 270 (329)
T ss_pred CCCCCCCHHHHhcCCCCCCCCH
Confidence 84 79999999987543
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-31 Score=284.58 Aligned_cols=269 Identities=12% Similarity=0.127 Sum_probs=175.3
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh-CCCCCCHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQI 338 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~-~~~~lse~e~~~I~~QI 338 (874)
..+...+..+.||-...++.....+. + -||+||||+||+|..++++ .+..|++..++.|+..|
T Consensus 125 ~tE~eIL~~lDHPFlPTLYa~fet~~--~--------------~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEv 188 (459)
T KOG0610|consen 125 QTEREILSLLDHPFLPTLYASFETDK--Y--------------SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEV 188 (459)
T ss_pred HHHHHHHHhcCCCccchhhheeeccc--e--------------eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHH
Confidence 34445666677775555555444222 2 2789999999999999965 45689999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||-+|||.|||||+||||.++|++.|+||-|+...... .++ .+.+.....
T Consensus 189 l~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~---Pt~------~~s~~~~~~--------------- 244 (459)
T KOG0610|consen 189 LLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS---PTL------VKSSSPRSS--------------- 244 (459)
T ss_pred HHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCC---Cee------eccCCCCCC---------------
Confidence 99999999999999999999999999999999999998654210 000 000000000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCC-CCCC-cccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSK-SSSP-LVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~-s~~p-~~~~~~~~~~~~~t~~~GT~ 496 (874)
..-....+.+.....+. ....+.+.. + .+... ...| +..... .....+.+||-
T Consensus 245 ---------~~~~~~~~~~~s~f~~r------~~~~~~~~~------k-~~~~~~~~~p~~~aep~---~~RSnSFVGTh 299 (459)
T KOG0610|consen 245 ---------GSQPSCRSRQPSCFSPR------CLSSSKKRK------K-KDESASRSLPELVAEPT---GARSNSFVGTH 299 (459)
T ss_pred ---------CCCcccccccccccccc------hhccccccc------c-ccccccccchhhhcCCC---Ccccccccccc
Confidence 00000000000000000 000000000 0 00000 0000 000000 01124679999
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhh-cCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLR-DRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~-~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|.|||++.|...+.++|.|+|||+||||+.|..||.. ..+.+.++. +..-.|.....+..+.|||+++|.+||++|
T Consensus 300 EYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kR 379 (459)
T KOG0610|consen 300 EYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKR 379 (459)
T ss_pred ccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhh
Confidence 99999999999999999999999999999999999943 333344443 333334444555778999999999999999
Q ss_pred CC----hhHHhhhHHHHhhHhhhh
Q 002843 574 PT----TREILQSEVTNEFQEVCA 593 (874)
Q Consensus 574 PT----a~EiL~hp~~~~~~~~~~ 593 (874)
.. |.||-+||||+++++...
T Consensus 380 lg~~rGA~eIK~HpFF~gVnWaLi 403 (459)
T KOG0610|consen 380 LGSKRGAAEIKRHPFFEGVNWALI 403 (459)
T ss_pred hccccchHHhhcCccccCCChhhe
Confidence 88 999999999999998753
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=296.98 Aligned_cols=247 Identities=13% Similarity=0.063 Sum_probs=167.1
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..++....|++++.+......+.. .+++||||+||+|.+++.+.+ .+++.+++.++.||+
T Consensus 49 ~~E~~il~~~~~~~iv~~~~~~~~~~~----------------~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~ 111 (363)
T cd05628 49 RAERDILVEADSLWVVKMFYSFQDKLN----------------LYLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETV 111 (363)
T ss_pred HHHHHHHHhCCCCCcceEEEEEecCCe----------------EEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHH
Confidence 344556777789988887766553332 256999999999999998766 799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||++||+||||||+|||++.++.+||+|||+++.+..............
T Consensus 112 ~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~-------------------------- 165 (363)
T cd05628 112 LAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNH-------------------------- 165 (363)
T ss_pred HHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccc--------------------------
Confidence 999999999999999999999999999999999999875431100000000000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
............... .... .... ........+||+.|+
T Consensus 166 -----------~~~~~~~~~~~~~~~---------------------~~~~--------~~~~--~~~~~~~~~Gt~~Y~ 203 (363)
T cd05628 166 -----------SLPSDFTFQNMNSKR---------------------KAET--------WKRN--RRQLAFSTVGTPDYI 203 (363)
T ss_pred -----------ccccccccccccccc---------------------ccch--------hhhc--cccccccccCCcccc
Confidence 000000000000000 0000 0000 000113568999999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhc---CCCCCCCCCCCHHHHHHHHHccccCCC---
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRD---RILPPSFLSENPKEAGFCLWQLHPEPL--- 571 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~---~~lpp~~~~~~p~l~dLi~~cL~~dP~--- 571 (874)
|||++.+..++.++|||||||+||||++|..||.. .......+.. ....|.....++.+.+||.+|+. +|.
T Consensus 204 aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~ 282 (363)
T cd05628 204 APEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRI 282 (363)
T ss_pred CHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcC
Confidence 99999998999999999999999999999999843 2222333332 12122223456788899998764 444
Q ss_pred CCCChhHHhhhHHHHhhHhhh
Q 002843 572 SRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~~~~~~~ 592 (874)
.||++.||++||||++.....
T Consensus 283 ~r~~~~ei~~hp~f~~~~~~~ 303 (363)
T cd05628 283 GAPGVEEIKTNPFFEGVDWEH 303 (363)
T ss_pred CCCCHHHHhCCCCCCCCCHHH
Confidence 458999999999999876544
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=296.10 Aligned_cols=240 Identities=16% Similarity=0.158 Sum_probs=171.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....|++++.+......+.. .+++||||+|++|.+++.+.+ .+++..++.|+.||
T Consensus 48 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi 110 (350)
T cd05573 48 VRAERDILADADSPWIVKLYYSFQDEEH----------------LYLVMEYMPGGDLMNLLIRKD-VFPEETARFYIAEL 110 (350)
T ss_pred HHHHHHHHHhcCCCCccchhhheecCCe----------------EEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 4455667778889998888766543332 257999999999999998875 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++.............+. . . .
T Consensus 111 ~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~-------~-----~--~--------- 167 (350)
T cd05573 111 VLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDS-------H-----N--L--------- 167 (350)
T ss_pred HHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccc-------c-----c--c---------
Confidence 999999999999999999999999999999999999987544211000000000 0 0 0
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.. ...... ................||+.|
T Consensus 168 ----------~~----------~~~~~~-------------------------------~~~~~~~~~~~~~~~~gt~~y 196 (350)
T cd05573 168 ----------LF----------RDNVLV-------------------------------RRRDHKQRRVRANSTVGTPDY 196 (350)
T ss_pred ----------cc----------cccccc-------------------------------cccccccccccccccccCccc
Confidence 00 000000 000000000112356899999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc---CCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD---RILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~---~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
+|||++.+..++.++|||||||+||||++|..||.... .....+.. ....+......+.+.+||.+||. +|.+|
T Consensus 197 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R 275 (350)
T cd05573 197 IAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDR 275 (350)
T ss_pred cCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-Chhhc
Confidence 99999999999999999999999999999999984322 12222222 22223333356889999999997 99999
Q ss_pred CC-hhHHhhhHHHHhhHh
Q 002843 574 PT-TREILQSEVTNEFQE 590 (874)
Q Consensus 574 PT-a~EiL~hp~~~~~~~ 590 (874)
|+ +.++|+||||..+..
T Consensus 276 ~~s~~~ll~hp~~~~~~~ 293 (350)
T cd05573 276 LGSFEEIKSHPFFKGIDW 293 (350)
T ss_pred CCCHHHHhcCCCcCCCCH
Confidence 99 999999999987544
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=291.62 Aligned_cols=204 Identities=17% Similarity=0.156 Sum_probs=161.2
Q ss_pred HHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHH
Q 002843 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (874)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~y 344 (874)
+.....||+++.+......+... +++||||+||+|.+++.... .+++.++..++.||+.||+|
T Consensus 49 l~~~~~hp~iv~~~~~~~~~~~~----------------~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~ 111 (316)
T cd05619 49 LSLAWEHPFLTHLYCTFQTKENL----------------FFVMEYLNGGDLMFHIQSCH-KFDLPRATFYAAEIICGLQF 111 (316)
T ss_pred HHhccCCCcCcceEEEEEeCCEE----------------EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHH
Confidence 33346899988887765543332 46999999999999998765 79999999999999999999
Q ss_pred HHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccc
Q 002843 345 HHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (874)
Q Consensus 345 LHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~ 424 (874)
||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 112 LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------------ 149 (316)
T cd05619 112 LHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG------------------------------------------ 149 (316)
T ss_pred HHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC------------------------------------------
Confidence 99999999999999999999999999999987632100
Q ss_pred cccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccc
Q 002843 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (874)
Q Consensus 425 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl 504 (874)
. .......||+.|+|||++
T Consensus 150 -----------------~--------------------------------------------~~~~~~~gt~~y~aPE~~ 168 (316)
T cd05619 150 -----------------D--------------------------------------------AKTCTFCGTPDYIAPEIL 168 (316)
T ss_pred -----------------C--------------------------------------------CceeeecCCccccCHHHH
Confidence 0 000244688999999999
Q ss_pred cCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCC-CCCCCCCCCHHHHHHHHHccccCCCCCCChh-HHh
Q 002843 505 SGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRPTTR-EIL 580 (874)
Q Consensus 505 ~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~-lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~-EiL 580 (874)
.+..++.++|||||||++|||++|..||... ......+.... ..+ ......+.+|+.+||+.||++||++. +++
T Consensus 169 ~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 169 LGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP--RWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred cCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--ccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 9988999999999999999999999998432 22233333221 111 12456788999999999999999996 899
Q ss_pred hhHHHHhhHh
Q 002843 581 QSEVTNEFQE 590 (874)
Q Consensus 581 ~hp~~~~~~~ 590 (874)
+||||..+..
T Consensus 247 ~h~~~~~~~~ 256 (316)
T cd05619 247 QHPFFREIDW 256 (316)
T ss_pred cCcccCCCCH
Confidence 9999988654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=296.54 Aligned_cols=200 Identities=18% Similarity=0.169 Sum_probs=157.2
Q ss_pred CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002843 270 ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG 349 (874)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~g 349 (874)
.||+++.+......+.. .+++||||+||+|.+++.+.+ .+++..++.|+.||+.||+|||++|
T Consensus 54 ~~p~i~~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH~~~ 116 (330)
T cd05586 54 ESPFIVGLKFSFQTDSD----------------LYLVTDYMSGGELFWHLQKEG-RFSEDRAKFYIAELVLALEHLHKYD 116 (330)
T ss_pred CCCcCcceEEEEecCCe----------------EEEEEcCCCCChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 68888877766543332 256999999999999998765 7999999999999999999999999
Q ss_pred CcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccccccc
Q 002843 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (874)
Q Consensus 350 IIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~ 429 (874)
|+||||||+|||++.++.+||+|||+++......
T Consensus 117 ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 150 (330)
T cd05586 117 IVYRDLKPENILLDATGHIALCDFGLSKANLTDN---------------------------------------------- 150 (330)
T ss_pred eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC----------------------------------------------
Confidence 9999999999999999999999999876321000
Q ss_pred CCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC-C
Q 002843 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-V 508 (874)
Q Consensus 430 ~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~-~ 508 (874)
......+||+.|+|||++.+. .
T Consensus 151 ---------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~ 173 (330)
T cd05586 151 ---------------------------------------------------------KTTNTFCGTTEYLAPEVLLDEKG 173 (330)
T ss_pred ---------------------------------------------------------CCccCccCCccccCHHHHcCCCC
Confidence 000245689999999999765 4
Q ss_pred CCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC----ChhHHhhh
Q 002843 509 CTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP----TTREILQS 582 (874)
Q Consensus 509 ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP----Ta~EiL~h 582 (874)
++.++|||||||+||||++|..||... ...+..+.............+.+.+|+.+||.+||.+|| ++.++++|
T Consensus 174 ~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 174 YTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred CCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 899999999999999999999997432 223334433322211122457788999999999999998 68999999
Q ss_pred HHHHhhH
Q 002843 583 EVTNEFQ 589 (874)
Q Consensus 583 p~~~~~~ 589 (874)
|||....
T Consensus 254 ~~~~~~~ 260 (330)
T cd05586 254 PFFADID 260 (330)
T ss_pred ccccCCC
Confidence 9998654
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=298.94 Aligned_cols=259 Identities=13% Similarity=0.092 Sum_probs=168.9
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....|++++.++........ .+++||||+||+|.+++.+.+ .+++..++.++.||
T Consensus 48 ~~~E~~il~~l~h~~iv~l~~~~~~~~~----------------~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi 110 (381)
T cd05626 48 VKAERDILAEADNEWVVKLYYSFQDKDN----------------LYFVMDYIPGGDMMSLLIRME-VFPEVLARFYIAEL 110 (381)
T ss_pred HHHHHHHHHhcCCCCeeeeEEEEecCCE----------------EEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 4445567788889999988877654333 256999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++.............. ..... .. ..... +.
T Consensus 111 ~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~------~~~~~--~~----~~~~~-~~ 177 (381)
T cd05626 111 TLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKG------SHIRQ--DS----MEPSD-LW 177 (381)
T ss_pred HHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccccc------ccccc--cc----cCccc-cc
Confidence 99999999999999999999999999999999999998744311000000000 00000 00 00000 00
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
+. .-....+...... ... .............+||+.|
T Consensus 178 ~~--------~~~~~~~~~~~~~-----------------------------~~~------~~~~~~~~~~~~~~gt~~Y 214 (381)
T cd05626 178 DD--------VSNCRCGDRLKTL-----------------------------EQR------ATKQHQRCLAHSLVGTPNY 214 (381)
T ss_pred cc--------ccccccccccchh-----------------------------hcc------ccccccccccccccCCccc
Confidence 00 0000000000000 000 0000000111356899999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc---CCCCCCCCCCCHHHHHHHHHcc--ccCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD---RILPPSFLSENPKEAGFCLWQL--HPEPL 571 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~---~~lpp~~~~~~p~l~dLi~~cL--~~dP~ 571 (874)
+|||++.+..|+.++|||||||+||||++|..||.... .....+.. ....+.....++.+.+||.+|| ..+|.
T Consensus 215 ~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~ 294 (381)
T cd05626 215 IAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERL 294 (381)
T ss_pred cCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCccccc
Confidence 99999998889999999999999999999999984322 11222221 2222333345688999999854 56666
Q ss_pred CCCChhHHhhhHHHHhhHh
Q 002843 572 SRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~~~~~ 590 (874)
.||++.+++.||||.....
T Consensus 295 ~R~~~~~~l~hp~f~~~~~ 313 (381)
T cd05626 295 GRNGADDIKAHPFFSEVDF 313 (381)
T ss_pred CCCCHHHHhcCcccCCCCh
Confidence 7999999999999987543
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=300.05 Aligned_cols=257 Identities=12% Similarity=0.093 Sum_probs=168.3
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..++....||+++.++.....+... +++||||+||+|.+++...+ .+++..++.|+.||+
T Consensus 49 ~~E~~il~~l~hp~iv~~~~~~~~~~~~----------------~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~ 111 (377)
T cd05629 49 KAERDVLAESDSPWVVSLYYSFQDAQYL----------------YLIMEFLPGGDLMTMLIKYD-TFSEDVTRFYMAECV 111 (377)
T ss_pred HHHHHHHHhCCCCCcceEEEEEEcCCee----------------EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHH
Confidence 3455677778899999988776533332 56999999999999998765 799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||++||+||||||+|||++.++.+||+|||+++.......... . .+...... ..
T Consensus 112 ~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~-------~-~~~~~~~~--~~----------- 170 (377)
T cd05629 112 LAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAY-------Y-QKLLQGKS--NK----------- 170 (377)
T ss_pred HHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccc-------c-cccccccc--cc-----------
Confidence 999999999999999999999999999999999999874431100000 0 00000000 00
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
............... + .........+++... . ......+||+.|+
T Consensus 171 --------~~~~~~~~~~~~~~~---~-------------~~~~~~~~~~~~~~~----------~-~~~~~~~gt~~y~ 215 (377)
T cd05629 171 --------NRIDNRNSVAVDSIN---L-------------TMSSKDQIATWKKNR----------R-LMAYSTVGTPDYI 215 (377)
T ss_pred --------ccccccccccccccc---c-------------cccchhhhhhhhhcc----------c-ccccccCCCcccc
Confidence 000000000000000 0 000000011111100 0 0002457999999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc---CCCCCCCCCCCHHHHHHHHHccccCCCCC-
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD---RILPPSFLSENPKEAGFCLWQLHPEPLSR- 573 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~---~~lpp~~~~~~p~l~dLi~~cL~~dP~~R- 573 (874)
|||++.+..|+.++|||||||+||||++|..||.... ..+..+.. ....|.....++.+.+||.+||. +|.+|
T Consensus 216 aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~ 294 (377)
T cd05629 216 APEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRL 294 (377)
T ss_pred CHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcC
Confidence 9999998889999999999999999999999984321 22223322 11122333456788999999997 77765
Q ss_pred --CChhHHhhhHHHHhhHh
Q 002843 574 --PTTREILQSEVTNEFQE 590 (874)
Q Consensus 574 --PTa~EiL~hp~~~~~~~ 590 (874)
+++.|+|.||||++...
T Consensus 295 ~r~~~~~~l~hp~~~~~~~ 313 (377)
T cd05629 295 GRGGAHEIKSHPFFRGVDW 313 (377)
T ss_pred CCCCHHHHhcCCCcCCCCH
Confidence 59999999999987544
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-31 Score=283.86 Aligned_cols=233 Identities=14% Similarity=0.029 Sum_probs=172.8
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChh---HHHHHHHHhHHhhcCCCCCceeccceee--cCcccCCcCCCCC
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD---AALKAAGAMMVASNASPKPVGVGTAVVS--NGSLDLGARTGVP 296 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 296 (874)
|.|.||+|.+.+ ...+.+.++...... ......+...+....||+++.+...... ++...
T Consensus 32 ~~~~v~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~-------- 96 (283)
T PHA02988 32 DQNSIYKGIFNN-------KEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPR-------- 96 (283)
T ss_pred CceEEEEEEECC-------EEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCc--------
Confidence 568888887522 122222222221111 1223466678888899999998876543 11111
Q ss_pred ccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCceEEecCCcEEEecccc
Q 002843 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (874)
Q Consensus 297 ~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs-~gIIHRDLKPsNILL~~~~~vKLiDFGl 375 (874)
.+++||||+||+|.++|.+.. .+++..+..++.|++.||.|||+ .+++||||||+|||++.++.+|++|||+
T Consensus 97 ------~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~ 169 (283)
T PHA02988 97 ------LSLILEYCTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGL 169 (283)
T ss_pred ------eEEEEEeCCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccch
Confidence 267999999999999998765 79999999999999999999998 4999999999999999999999999999
Q ss_pred chhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCC
Q 002843 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (874)
Q Consensus 376 ar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d 455 (874)
++.+...
T Consensus 170 ~~~~~~~------------------------------------------------------------------------- 176 (283)
T PHA02988 170 EKILSSP------------------------------------------------------------------------- 176 (283)
T ss_pred Hhhhccc-------------------------------------------------------------------------
Confidence 8633200
Q ss_pred CCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC--CCCCCccchhHHHHHHHHhcCCCCchH
Q 002843 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGRFDSER 533 (874)
Q Consensus 456 ~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g--~~ys~kSDIwSLGVIL~ELltG~~p~~ 533 (874)
....+||..|+|||++.+ ..|+.++|||||||++|||++|..||.
T Consensus 177 ---------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~ 223 (283)
T PHA02988 177 ---------------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFE 223 (283)
T ss_pred ---------------------------------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCC
Confidence 012356789999999976 679999999999999999999999985
Q ss_pred HH--HHHHHHhhcCCCCCCCC-CCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 534 AL--AAAMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 534 ~~--~~~~~~l~~~~lpp~~~-~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.. ......+......+.+. ...+.+.+|+.+||+.||++|||+.|+++.
T Consensus 224 ~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 224 NLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred CCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 42 22233332222222232 456779999999999999999999999853
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-31 Score=299.25 Aligned_cols=258 Identities=14% Similarity=0.088 Sum_probs=170.0
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..+++...|++++.+......+... +++||||+||+|.+++.+.+ .+++..++.++.||
T Consensus 48 ~~~E~~il~~~~h~~iv~~~~~~~~~~~~----------------~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi 110 (382)
T cd05625 48 VKAERDILAEADNEWVVRLYYSFQDKDNL----------------YFVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAEL 110 (382)
T ss_pred HHHHHHHHHhCCCCcCCeEEEEEEeCCEE----------------EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 34455677788899999988776644332 56999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++........... +.++..... ...+.
T Consensus 111 ~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~------------~~~~~~~~~----~~~~~ 174 (382)
T cd05625 111 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY------------QSGDHVRQD----SMDFS 174 (382)
T ss_pred HHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc------------ccccccccc----ccccc
Confidence 99999999999999999999999999999999999998643311000000 000000000 00000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. .+ .............. .+. ..............+||+.|
T Consensus 175 ~-----~~-----~~~~~~~~~~~~~~-------------~~~-----------------~~~~~~~~~~~~~~~gt~~Y 214 (382)
T cd05625 175 N-----EW-----GDPANCRCGDRLKP-------------LER-----------------RAARQHQRCLAHSLVGTPNY 214 (382)
T ss_pred c-----cc-----cccccccccccccc-------------hhh-----------------hhccccccccccccccCccc
Confidence 0 00 00000000000000 000 00000000111356899999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc---CCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD---RILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~---~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
+|||++.+..|+.++|||||||+||||++|.+||.... .....+.. ....|.....++.+.+||.+|+ .+|.+|
T Consensus 215 ~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R 293 (382)
T cd05625 215 IAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDR 293 (382)
T ss_pred CCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHc
Confidence 99999999899999999999999999999999985321 11222222 2222333445688899999987 599999
Q ss_pred CC---hhHHhhhHHHHhhHh
Q 002843 574 PT---TREILQSEVTNEFQE 590 (874)
Q Consensus 574 PT---a~EiL~hp~~~~~~~ 590 (874)
++ +.++++||||..+..
T Consensus 294 ~~~~~~~ei~~hp~f~~~~~ 313 (382)
T cd05625 294 LGKNGADEIKAHPFFKTIDF 313 (382)
T ss_pred CCCCCHHHHhcCCCcCCcCh
Confidence 87 999999999987543
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=289.46 Aligned_cols=209 Identities=17% Similarity=0.169 Sum_probs=162.8
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....|++++.+......++.. +++||||+|++|.+++...+ .+++..+..++.|
T Consensus 49 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~ 111 (333)
T cd06650 49 QIIRELQVLHECNSPYIVGFYGAFYSDGEI----------------SICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIA 111 (333)
T ss_pred HHHHHHHHHHHCCCCcccceeEEEEECCEE----------------EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHH
Confidence 345566777788899999988776644432 56999999999999998765 6999999999999
Q ss_pred HHHHHHHHHHC-CCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 338 IVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 338 Il~aL~yLHs~-gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
|+.||.|||+. +|+||||||+|||++.++.+||+|||++..+...
T Consensus 112 l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---------------------------------- 157 (333)
T cd06650 112 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------- 157 (333)
T ss_pred HHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh----------------------------------
Confidence 99999999985 7999999999999999999999999987632200
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
......||.
T Consensus 158 -----------------------------------------------------------------------~~~~~~~~~ 166 (333)
T cd06650 158 -----------------------------------------------------------------------MANSFVGTR 166 (333)
T ss_pred -----------------------------------------------------------------------ccccCCCCc
Confidence 001335788
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH-HHHHhhc-------------------------------
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA-AMSDLRD------------------------------- 544 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~-~~~~l~~------------------------------- 544 (874)
.|+|||++.+..++.++|||||||++|||++|..||..... .+..+..
T Consensus 167 ~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (333)
T cd06650 167 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSR 246 (333)
T ss_pred cccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhccccc
Confidence 99999999988899999999999999999999888642111 0100000
Q ss_pred -------------CCCCCCCC--CCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 545 -------------RILPPSFL--SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 545 -------------~~lpp~~~--~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
...++.+. .....+.+|+.+||++||++|||+.|+|.||||+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 247 PPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred ccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 00011111 134568899999999999999999999999999853
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-31 Score=298.97 Aligned_cols=212 Identities=15% Similarity=0.106 Sum_probs=162.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+.+....+... +++||++. ++|.+++.... .+++.+++.|+.||
T Consensus 130 ~~~E~~il~~l~HpnIv~~~~~~~~~~~~----------------~lv~e~~~-~~L~~~l~~~~-~l~~~~~~~i~~qi 191 (391)
T PHA03212 130 TATEAHILRAINHPSIIQLKGTFTYNKFT----------------CLILPRYK-TDLYCYLAAKR-NIAICDILAIERSV 191 (391)
T ss_pred hHHHHHHHHhCCCCCCCCEeEEEEECCee----------------EEEEecCC-CCHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 45567788889999999998776544332 56999996 79999997765 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++|||||||||+|||++.++.+||+|||+++...+.
T Consensus 192 ~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~------------------------------------ 235 (391)
T PHA03212 192 LRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI------------------------------------ 235 (391)
T ss_pred HHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccc------------------------------------
Confidence 99999999999999999999999999999999999998632100
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. .......+||+.|
T Consensus 236 -----------------------~-------------------------------------------~~~~~~~~gt~~y 249 (391)
T PHA03212 236 -----------------------N-------------------------------------------ANKYYGWAGTIAT 249 (391)
T ss_pred -----------------------c-------------------------------------------ccccccccCccCC
Confidence 0 0000245789999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH---------HHHHHHhh--------------------------
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL---------AAAMSDLR-------------------------- 543 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~---------~~~~~~l~-------------------------- 543 (874)
+|||++.+..|+.++|||||||+||||++|..|+... ...+..+.
T Consensus 250 ~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (391)
T PHA03212 250 NAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLA 329 (391)
T ss_pred CChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHH
Confidence 9999999989999999999999999999997664210 00011000
Q ss_pred c-CCCCC----CC---CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 544 D-RILPP----SF---LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 544 ~-~~lpp----~~---~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
. ....+ .+ ......+.+||.+||++||.+|||+.|+|+||||..+..
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~ 384 (391)
T PHA03212 330 KKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPD 384 (391)
T ss_pred hccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCC
Confidence 0 00000 00 112245789999999999999999999999999987643
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=290.28 Aligned_cols=199 Identities=17% Similarity=0.132 Sum_probs=161.0
Q ss_pred HHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHH
Q 002843 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (874)
Q Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~a 341 (874)
.-.-++...|||||.+...-. .-|++ |++||||..|-|.+.|+... +++......|.++|+.|
T Consensus 162 dIKHLRkLkH~NII~FkGVCt-----------qsPcy-----CIiMEfCa~GqL~~VLka~~-~itp~llv~Wsk~IA~G 224 (904)
T KOG4721|consen 162 DIKHLRKLKHPNIITFKGVCT-----------QSPCY-----CIIMEFCAQGQLYEVLKAGR-PITPSLLVDWSKGIAGG 224 (904)
T ss_pred hHHHHHhccCcceeeEeeeec-----------CCcee-----EEeeeccccccHHHHHhccC-ccCHHHHHHHHHHhhhh
Confidence 335688899999998876622 22333 68999999999999999876 89999999999999999
Q ss_pred HHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccc
Q 002843 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (874)
Q Consensus 342 L~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~ 421 (874)
+.|||.+.|||||||.-||||..+..|||+|||.++.+.+...
T Consensus 225 M~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ST------------------------------------- 267 (904)
T KOG4721|consen 225 MNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKST------------------------------------- 267 (904)
T ss_pred hHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhh-------------------------------------
Confidence 9999999999999999999999999999999999886541100
Q ss_pred ccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCc
Q 002843 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (874)
Q Consensus 422 ~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~AP 501 (874)
. -...||..||||
T Consensus 268 -----------------------k--------------------------------------------MSFaGTVaWMAP 280 (904)
T KOG4721|consen 268 -----------------------K--------------------------------------------MSFAGTVAWMAP 280 (904)
T ss_pred -----------------------h--------------------------------------------hhhhhhHhhhCH
Confidence 0 245789999999
Q ss_pred ccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHh---hcCCCCCCCCCCCH-HHHHHHHHccccCCCCCCChh
Q 002843 502 EELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDL---RDRILPPSFLSENP-KEAGFCLWQLHPEPLSRPTTR 577 (874)
Q Consensus 502 Evl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l---~~~~lpp~~~~~~p-~l~dLi~~cL~~dP~~RPTa~ 577 (874)
|++...+++.|+|||||||||||||||..|+.+... +..| -...+.-..++..| .+.-|++.||.-.|.+||++.
T Consensus 281 EvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds-sAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFr 359 (904)
T KOG4721|consen 281 EVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS-SAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFR 359 (904)
T ss_pred HHhhcCCcccccceehhHHHHHHHHhcCCCccccch-heeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHH
Confidence 999999999999999999999999999999865442 1111 11222222223333 477799999999999999999
Q ss_pred HHhhh
Q 002843 578 EILQS 582 (874)
Q Consensus 578 EiL~h 582 (874)
+||.|
T Consensus 360 qil~H 364 (904)
T KOG4721|consen 360 QILLH 364 (904)
T ss_pred HHHHH
Confidence 99998
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=294.34 Aligned_cols=214 Identities=13% Similarity=0.062 Sum_probs=165.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....|++++.+......+.. .+++||||+|++|.+++.+....+++..+..++.||
T Consensus 48 ~~~e~~i~~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi 111 (330)
T cd05601 48 FEEERDILSISNSPWIPQLQYAFQDKDN----------------LYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAEL 111 (330)
T ss_pred HHHHHHHHHhCCCCCCcceeeEEecCCe----------------EEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 3345566777788888887665443322 257999999999999998864479999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 112 ~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~---------------------------------- 157 (330)
T cd05601 112 VLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM---------------------------------- 157 (330)
T ss_pred HHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc----------------------------------
Confidence 9999999999999999999999999999999999999864320000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......||+.|
T Consensus 158 --------------------------------------------------------------------~~~~~~~gt~~y 169 (330)
T cd05601 158 --------------------------------------------------------------------VNSKLPVGTPDY 169 (330)
T ss_pred --------------------------------------------------------------------eeeecccCCccc
Confidence 000234688999
Q ss_pred cCccccc------CCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCC---CCCCCCCCCHHHHHHHHHccc
Q 002843 499 ASPEELS------GGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRI---LPPSFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 499 ~APEvl~------g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~---lpp~~~~~~p~l~dLi~~cL~ 567 (874)
+|||++. +..++.++|||||||++|||++|..||... ...+..+.... ..+......+.+.+|+.+||.
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~ 249 (330)
T cd05601 170 IAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC 249 (330)
T ss_pred cCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc
Confidence 9999987 456889999999999999999999998432 22233333221 122333456778999999998
Q ss_pred cCCCCCCChhHHhhhHHHHhhHhh
Q 002843 568 PEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
+|.+||++.++++||||..+...
T Consensus 250 -~p~~R~t~~~l~~h~~~~~~~~~ 272 (330)
T cd05601 250 -GQKERLGYEGLCCHPFFSKIDWN 272 (330)
T ss_pred -ChhhCCCHHHHhCCCCcCCCCHH
Confidence 99999999999999999875543
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=304.22 Aligned_cols=204 Identities=18% Similarity=0.177 Sum_probs=163.6
Q ss_pred hhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Q 002843 267 ASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHH 346 (874)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLH 346 (874)
-++.||-.+.++......... +.||||+.||++..+++.. .|++..++.|+..|+.||.|||
T Consensus 424 la~~HPFL~~L~~~fQT~~~l----------------~fvmey~~Ggdm~~~~~~~--~F~e~rarfyaAev~l~L~fLH 485 (694)
T KOG0694|consen 424 LANRHPFLVNLFSCFQTKEHL----------------FFVMEYVAGGDLMHHIHTD--VFSEPRARFYAAEVVLGLQFLH 485 (694)
T ss_pred HhccCCeEeecccccccCCeE----------------EEEEEecCCCcEEEEEecc--cccHHHHHHHHHHHHHHHHHHH
Confidence 344677666655554433333 4599999999966555444 6999999999999999999999
Q ss_pred HCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccc
Q 002843 347 TQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRW 426 (874)
Q Consensus 347 s~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~ 426 (874)
++|||+||||.+||||+..|++||+|||++|+.- .
T Consensus 486 ~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m------------------------~--------------------- 520 (694)
T KOG0694|consen 486 ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM------------------------G--------------------- 520 (694)
T ss_pred hcCceeeecchhheEEcccCcEEecccccccccC------------------------C---------------------
Confidence 9999999999999999999999999999998422 0
Q ss_pred cccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC
Q 002843 427 WSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG 506 (874)
Q Consensus 427 ~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g 506 (874)
+| ...++.+|||.|||||++.+
T Consensus 521 -------------------------------------------~g---------------~~TsTfCGTpey~aPEil~e 542 (694)
T KOG0694|consen 521 -------------------------------------------QG---------------DRTSTFCGTPEFLAPEVLTE 542 (694)
T ss_pred -------------------------------------------CC---------------CccccccCChhhcChhhhcc
Confidence 00 01157899999999999999
Q ss_pred CCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHH-hhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh-----hH
Q 002843 507 GVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSD-LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----RE 578 (874)
Q Consensus 507 ~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~-l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa-----~E 578 (874)
..|+.++|.|||||+|||||.|..||.+ ....... +...++.|.+++ .+..+++.++|..+|++|..+ .+
T Consensus 543 ~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls--~ea~~il~~ll~k~p~kRLG~~e~d~~~ 620 (694)
T KOG0694|consen 543 QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS--KEAIAIMRRLLRKNPEKRLGSGERDAED 620 (694)
T ss_pred CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCccc--HHHHHHHHHHhccCcccccCCCCCCchh
Confidence 9999999999999999999999999852 2333443 344666676654 457799999999999999764 78
Q ss_pred HhhhHHHHhhHhhhh
Q 002843 579 ILQSEVTNEFQEVCA 593 (874)
Q Consensus 579 iL~hp~~~~~~~~~~ 593 (874)
|.+||||+.+.+...
T Consensus 621 i~~hpFFr~i~w~~L 635 (694)
T KOG0694|consen 621 IKKHPFFRSIDWDDL 635 (694)
T ss_pred hhhCCccccCCHHHH
Confidence 999999999887665
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=292.52 Aligned_cols=207 Identities=14% Similarity=0.134 Sum_probs=164.2
Q ss_pred HhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Q 002843 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL 342 (874)
..++....||+++.+......+... +++||||+|++|..++...+ .+++.++..++.||+.||
T Consensus 47 ~~~l~~~~hp~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al 109 (325)
T cd05604 47 NVLLKNVKHPFLVGLHYSFQTTEKL----------------YFVLDFVNGGELFFHLQRER-SFPEPRARFYAAEIASAL 109 (325)
T ss_pred HHHHHhCCCCCCccEEEEEecCCEE----------------EEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 3467778899999887665543332 56999999999999998765 799999999999999999
Q ss_pred HHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 343 ~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 110 ~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~---------------------------------------- 149 (325)
T cd05604 110 GYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ---------------------------------------- 149 (325)
T ss_pred HHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC----------------------------------------
Confidence 9999999999999999999999999999999987632100
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
. ......+||+.|+|||
T Consensus 150 ------------------~---------------------------------------------~~~~~~~gt~~y~aPE 166 (325)
T cd05604 150 ------------------S---------------------------------------------DTTTTFCGTPEYLAPE 166 (325)
T ss_pred ------------------C---------------------------------------------CCcccccCChhhCCHH
Confidence 0 0002457899999999
Q ss_pred cccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChh---
Q 002843 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR--- 577 (874)
Q Consensus 503 vl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~--- 577 (874)
++.+..++.++|||||||++|||++|..||... ......+....+. ........+.+++.+||+.+|.+||++.
T Consensus 167 ~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 167 VIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLV-LRPGASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred HHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCcc-CCCCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 999989999999999999999999999998432 2223333332211 1123457788999999999999999874
Q ss_pred -HHhhhHHHHhhHh
Q 002843 578 -EILQSEVTNEFQE 590 (874)
Q Consensus 578 -EiL~hp~~~~~~~ 590 (874)
+++.||||.....
T Consensus 246 ~~i~~h~~f~~~~~ 259 (325)
T cd05604 246 LEIQEHPFFESLSW 259 (325)
T ss_pred HHHhcCCCcCCCCH
Confidence 8999999987543
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=307.28 Aligned_cols=180 Identities=19% Similarity=0.195 Sum_probs=139.3
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCceEEecCC---------------
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSN--------------- 366 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs-~gIIHRDLKPsNILL~~~~--------------- 366 (874)
.|++||++ |++|.++|.+.+ .+++.++..|+.||+.||+|||+ .|||||||||+|||++.++
T Consensus 207 ~~iv~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 207 MCIVMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred EEEEEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 47899998 689999998765 79999999999999999999998 5999999999999998765
Q ss_pred -cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccc
Q 002843 367 -QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (874)
Q Consensus 367 -~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~ 445 (874)
.+||+|||++....
T Consensus 285 ~~vkl~DfG~~~~~~----------------------------------------------------------------- 299 (467)
T PTZ00284 285 CRVRICDLGGCCDER----------------------------------------------------------------- 299 (467)
T ss_pred ceEEECCCCccccCc-----------------------------------------------------------------
Confidence 48888888654111
Q ss_pred cccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHh
Q 002843 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (874)
Q Consensus 446 l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~EL 525 (874)
...+..+||+.|+|||++.+..|+.++|||||||+||||
T Consensus 300 -----------------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~el 338 (467)
T PTZ00284 300 -----------------------------------------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYEL 338 (467)
T ss_pred -----------------------------------------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHH
Confidence 000345789999999999999999999999999999999
Q ss_pred cCCCCchHHHHH-----HHHHhhcC----------------------CCCCCC----------------CCCCHHHHHHH
Q 002843 526 FGRFDSERALAA-----AMSDLRDR----------------------ILPPSF----------------LSENPKEAGFC 562 (874)
Q Consensus 526 ltG~~p~~~~~~-----~~~~l~~~----------------------~lpp~~----------------~~~~p~l~dLi 562 (874)
++|..||..... .+..+... .+.+.+ ....+.+.+||
T Consensus 339 ltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli 418 (467)
T PTZ00284 339 YTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLI 418 (467)
T ss_pred HhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHH
Confidence 999999842111 11111000 000000 01134577999
Q ss_pred HHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 563 LWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 563 ~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.+||++||.+|||+.|+|+||||.....
T Consensus 419 ~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 419 YGLLHYDRQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred HHhCCcChhhCCCHHHHhcCccccccCC
Confidence 9999999999999999999999987543
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-31 Score=285.97 Aligned_cols=211 Identities=15% Similarity=0.191 Sum_probs=161.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......+... +++|||+++ +|.+++...+..+++.+++.++.||
T Consensus 51 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi 113 (309)
T cd07872 51 AIREVSLLKDLKHANIVTLHDIVHTDKSL----------------TLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQI 113 (309)
T ss_pred HHHHHHHHHhCCCCCcceEEEEEeeCCeE----------------EEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 34456677788899999888776544432 569999985 9999998766579999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 114 ~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----------------------------------- 158 (309)
T cd07872 114 LRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT----------------------------------- 158 (309)
T ss_pred HHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc-----------------------------------
Confidence 999999999999999999999999999999999999876322000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......+|+.|
T Consensus 159 --------------------------------------------------------------------~~~~~~~~~~~y 170 (309)
T cd07872 159 --------------------------------------------------------------------KTYSNEVVTLWY 170 (309)
T ss_pred --------------------------------------------------------------------cccccccccccc
Confidence 000133568899
Q ss_pred cCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHh---hcCC------------------CCC-----
Q 002843 499 ASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDL---RDRI------------------LPP----- 549 (874)
Q Consensus 499 ~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l---~~~~------------------lpp----- 549 (874)
+|||++.+ ..++.++|||||||++|||++|.+||.... ..+..+ .... .+.
T Consensus 171 ~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (309)
T cd07872 171 RPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQP 250 (309)
T ss_pred cCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCc
Confidence 99999876 458999999999999999999998873211 111111 0000 000
Q ss_pred ---CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 550 ---SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 550 ---~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.....++.+.+||.+||+.||.+|||+.|+|+||||+.+.
T Consensus 251 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 251 LINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 1122346788999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-31 Score=290.99 Aligned_cols=206 Identities=16% Similarity=0.132 Sum_probs=163.1
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
.++....||+++.+......+.. .+++||||+|++|.+++...+ .+++..++.++.||+.||+
T Consensus 48 ~~l~~~~h~~Iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~ 110 (325)
T cd05602 48 VLLKNVKHPFLVGLHFSFQTADK----------------LYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALG 110 (325)
T ss_pred HHHHhCCCCCCCceeEEEEcCCe----------------EEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Confidence 45677789999888766553333 256999999999999998765 6999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 111 ~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~----------------------------------------- 149 (325)
T cd05602 111 YLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH----------------------------------------- 149 (325)
T ss_pred HHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC-----------------------------------------
Confidence 999999999999999999999999999999998632200
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
. ......+||+.|+|||+
T Consensus 150 ------------------~--------------------------------------------~~~~~~~gt~~y~aPE~ 167 (325)
T cd05602 150 ------------------N--------------------------------------------GTTSTFCGTPEYLAPEV 167 (325)
T ss_pred ------------------C--------------------------------------------CCcccccCCccccCHHH
Confidence 0 00024578999999999
Q ss_pred ccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChh----
Q 002843 504 LSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR---- 577 (874)
Q Consensus 504 l~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~---- 577 (874)
+.+..++.++|||||||++|||++|..||... ...+..+...... ......+.+.+|+.+||+.+|.+||++.
T Consensus 168 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 168 LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQ-LKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred HcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcC-CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 99988999999999999999999999998432 2223333332221 1123457789999999999999999886
Q ss_pred HHhhhHHHHhhHh
Q 002843 578 EILQSEVTNEFQE 590 (874)
Q Consensus 578 EiL~hp~~~~~~~ 590 (874)
++++|+||....+
T Consensus 247 ~i~~~~~~~~~~~ 259 (325)
T cd05602 247 EIKNHIFFSPINW 259 (325)
T ss_pred HHhcCcccCCCCH
Confidence 8999999976543
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=289.61 Aligned_cols=206 Identities=15% Similarity=0.135 Sum_probs=162.5
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
.++....||+++.+......... .+++||||+|++|..++.... .+++.++..|+.||+.||+
T Consensus 48 ~~l~~~~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~ 110 (321)
T cd05603 48 VLLKNLKHPFLVGLHYSFQTAEK----------------LYFVLDYVNGGELFFHLQRER-CFLEPRARFYAAEVASAIG 110 (321)
T ss_pred HHHHhCCCCCccceeeEEEcCCE----------------EEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHH
Confidence 46777889999988766543332 256999999999999998765 7999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 111 ~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----------------------------------------- 149 (321)
T cd05603 111 YLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP----------------------------------------- 149 (321)
T ss_pred HHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC-----------------------------------------
Confidence 999999999999999999999999999999987632100
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
.......+||+.|+|||+
T Consensus 150 --------------------------------------------------------------~~~~~~~~gt~~y~aPE~ 167 (321)
T cd05603 150 --------------------------------------------------------------EETTSTFCGTPEYLAPEV 167 (321)
T ss_pred --------------------------------------------------------------CCccccccCCcccCCHHH
Confidence 000024468899999999
Q ss_pred ccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChh----
Q 002843 504 LSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR---- 577 (874)
Q Consensus 504 l~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~---- 577 (874)
+.+..++.++|||||||++|||++|..||... ......+....+ .........+.+++.+||+.+|.+||++.
T Consensus 168 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (321)
T cd05603 168 LRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPL-QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFL 246 (321)
T ss_pred hcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHH
Confidence 99888999999999999999999999998432 222333333221 11123456788999999999999998764
Q ss_pred HHhhhHHHHhhHh
Q 002843 578 EILQSEVTNEFQE 590 (874)
Q Consensus 578 EiL~hp~~~~~~~ 590 (874)
++++|+||.....
T Consensus 247 ~~~~~~~~~~~~~ 259 (321)
T cd05603 247 EIKNHVFFSPINW 259 (321)
T ss_pred HHhCCCCcCCCCH
Confidence 9999999986543
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=280.98 Aligned_cols=210 Identities=13% Similarity=0.112 Sum_probs=162.8
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIV 339 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl 339 (874)
.+..++....||+++.+......+.. .+++|||++|++|.+++...+ ..+++..+..++.||+
T Consensus 42 ~E~~il~~l~hp~i~~~~~~~~~~~~----------------~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~ 105 (277)
T cd05607 42 LEKEILEKVNSPFIVNLAYAFESKTH----------------LCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQIT 105 (277)
T ss_pred HHHHHHHhcCCCcEEEEEEEEecCCe----------------EEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHH
Confidence 35567778889999887766543322 257999999999999986533 3689999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 106 ~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~------------------------------------- 148 (277)
T cd05607 106 CGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG------------------------------------- 148 (277)
T ss_pred HHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC-------------------------------------
Confidence 9999999999999999999999999999999999987632200
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.......|+..|+
T Consensus 149 -------------------------------------------------------------------~~~~~~~~~~~y~ 161 (277)
T cd05607 149 -------------------------------------------------------------------KTITQRAGTNGYM 161 (277)
T ss_pred -------------------------------------------------------------------ceeeccCCCCCcc
Confidence 0002335788999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH------HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL------AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~------~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
|||++.+..++.++|||||||++|||++|..||... ............+.......+.+.+|+.+||.+||++|
T Consensus 162 aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R 241 (277)
T cd05607 162 APEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDR 241 (277)
T ss_pred CHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhC
Confidence 999999888999999999999999999999997431 11111222222222223456778999999999999999
Q ss_pred CCh----hHHhhhHHHHhhHh
Q 002843 574 PTT----REILQSEVTNEFQE 590 (874)
Q Consensus 574 PTa----~EiL~hp~~~~~~~ 590 (874)
|++ .+++.||||+.+..
T Consensus 242 ~~~~~~~~~~~~h~~f~~~~~ 262 (277)
T cd05607 242 LGSREKNDDPRKHEFFKTINF 262 (277)
T ss_pred CCCccchhhhhcChhhcCCCH
Confidence 999 66789999987543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-31 Score=289.72 Aligned_cols=183 Identities=15% Similarity=0.154 Sum_probs=148.3
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccc
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESA 383 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~ 383 (874)
+++||||+||+|.+++...+ .+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 77 ~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 77 YFVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred EEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 57999999999999998766 69999999999999999999999999999999999999999999999999876321000
Q ss_pred cCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccccc
Q 002843 384 SLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHT 463 (874)
Q Consensus 384 ~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~ 463 (874)
T Consensus 156 -------------------------------------------------------------------------------- 155 (323)
T cd05616 156 -------------------------------------------------------------------------------- 155 (323)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHH
Q 002843 464 NAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSD 541 (874)
Q Consensus 464 ~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~ 541 (874)
.......||+.|+|||++.+..++.++|||||||++|||++|..||... ......
T Consensus 156 -----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~ 212 (323)
T cd05616 156 -----------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 212 (323)
T ss_pred -----------------------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0002456899999999999989999999999999999999999998432 222333
Q ss_pred hhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh-----hHHhhhHHHHhhHhh
Q 002843 542 LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNEFQEV 591 (874)
Q Consensus 542 l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa-----~EiL~hp~~~~~~~~ 591 (874)
+...... ......+.+.+||.+||+.+|.+|+++ .++++||||..+.+.
T Consensus 213 i~~~~~~-~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~ 266 (323)
T cd05616 213 IMEHNVA-YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWE 266 (323)
T ss_pred HHhCCCC-CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 3332211 112345778999999999999999985 899999999876543
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=293.44 Aligned_cols=232 Identities=17% Similarity=0.097 Sum_probs=185.7
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (874)
+|.|+.|.+....+ .+.+.+++- .+.......+...|....|+++|+++.........
T Consensus 219 FG~V~~g~~~~~~~------vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~pi--------------- 276 (468)
T KOG0197|consen 219 FGEVWLGKWNGSTK------VAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPI--------------- 276 (468)
T ss_pred cceEEEEEEcCCCc------ccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCce---------------
Confidence 57888887643333 233333332 34445566888999999999999999887654432
Q ss_pred CceEeeccCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 303 GLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~-~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
++|||||+.|+|.+||+. .+..+...+.+.++.|||+|++||+++++|||||...|||+++++.+||+||||||...+
T Consensus 277 -yIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d 355 (468)
T KOG0197|consen 277 -YIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGD 355 (468)
T ss_pred -EEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCC
Confidence 569999999999999987 555899999999999999999999999999999999999999999999999999994442
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
+.. . .
T Consensus 356 ~~Y-----------------------~--------------------------------~-------------------- 360 (468)
T KOG0197|consen 356 DEY-----------------------T--------------------------------A-------------------- 360 (468)
T ss_pred Cce-----------------------e--------------------------------e--------------------
Confidence 211 0 0
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCch--HHHHHH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSE--RALAAA 538 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~--~~~~~~ 538 (874)
-...++| ..|.|||.+..+.|+.+||||||||+||||+| |+.|+ ......
T Consensus 361 --------~~~~kfP-------------------IkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev 413 (468)
T KOG0197|consen 361 --------SEGGKFP-------------------IKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV 413 (468)
T ss_pred --------cCCCCCC-------------------ceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH
Confidence 0012333 25669999999999999999999999999998 66664 456667
Q ss_pred HHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHH
Q 002843 539 MSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (874)
Q Consensus 539 ~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~Ei 579 (874)
+..+..+..-|......+.+.++|..||+.+|++|||++.+
T Consensus 414 ~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L 454 (468)
T KOG0197|consen 414 LELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETL 454 (468)
T ss_pred HHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHH
Confidence 88888888888888888999999999999999999999854
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-31 Score=290.15 Aligned_cols=204 Identities=17% Similarity=0.153 Sum_probs=158.8
Q ss_pred hhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Q 002843 267 ASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHH 346 (874)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLH 346 (874)
....||+++.+......... .+++||||+|++|..++...+ .+++.+++.|+.||+.||+|||
T Consensus 51 ~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH 113 (327)
T cd05617 51 QASSNPFLVGLHSCFQTTSR----------------LFLVIEYVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLH 113 (327)
T ss_pred hhcCCCCEeeEEEEEEeCCE----------------EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 44468887777665443332 257999999999999998765 7999999999999999999999
Q ss_pred HCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccc
Q 002843 347 TQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRW 426 (874)
Q Consensus 347 s~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~ 426 (874)
++||+||||||+|||++.++.+||+|||+++.....
T Consensus 114 ~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-------------------------------------------- 149 (327)
T cd05617 114 ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP-------------------------------------------- 149 (327)
T ss_pred HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC--------------------------------------------
Confidence 999999999999999999999999999987632100
Q ss_pred cccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC
Q 002843 427 WSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG 506 (874)
Q Consensus 427 ~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g 506 (874)
.......+||+.|+|||++.+
T Consensus 150 -----------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~ 170 (327)
T cd05617 150 -----------------------------------------------------------GDTTSTFCGTPNYIAPEILRG 170 (327)
T ss_pred -----------------------------------------------------------CCceecccCCcccCCHHHHCC
Confidence 000024578999999999999
Q ss_pred CCCCCccchhHHHHHHHHhcCCCCchHH---------HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh-
Q 002843 507 GVCTTSSNIYSLGVLFFELFGRFDSERA---------LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT- 576 (874)
Q Consensus 507 ~~ys~kSDIwSLGVIL~ELltG~~p~~~---------~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa- 576 (874)
..++.++|||||||+||||++|..||.. .......+..... ......++.+.+++.+||..||.+|+++
T Consensus 171 ~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 171 EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI-RIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 8999999999999999999999999842 1112222222211 1112235678899999999999999985
Q ss_pred -----hHHhhhHHHHhhHhh
Q 002843 577 -----REILQSEVTNEFQEV 591 (874)
Q Consensus 577 -----~EiL~hp~~~~~~~~ 591 (874)
.+++.||||+.+.+.
T Consensus 250 ~~~~~~~i~~h~~f~~~~~~ 269 (327)
T cd05617 250 PQTGFSDIKSHTFFRSIDWD 269 (327)
T ss_pred CCCCHHHHHcCCCCCCCCHH
Confidence 699999999986544
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-31 Score=296.64 Aligned_cols=253 Identities=12% Similarity=0.011 Sum_probs=168.4
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..++....|++++.+......++. .+++||||+||+|.++|.+.+ .+++..++.|+.||+
T Consensus 49 ~~E~~il~~l~h~~iv~~~~~~~~~~~----------------~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~ 111 (376)
T cd05598 49 KAERDILAEADNEWVVKLYYSFQDKDN----------------LYFVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELT 111 (376)
T ss_pred HHHHHHHHhCCCCCcceEEEEEEcCCE----------------EEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHH
Confidence 345567788889999988776554333 256999999999999998766 799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||++||+||||||+|||++.++.+||+|||++............ .........
T Consensus 112 ~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~------------~~~~~~~~~---------- 169 (376)
T cd05598 112 CAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY------------QKGDHHRQD---------- 169 (376)
T ss_pred HHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc------------ccccccccc----------
Confidence 9999999999999999999999999999999999998643210000000 000000000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
. ...... ..+...... ...... . ............+||+.|+
T Consensus 170 ~---~~~~~~---~~~~~~~~~---------------~~~~~~----------------~-~~~~~~~~~~~~~gt~~y~ 211 (376)
T cd05598 170 S---MEPSEE---WSEIDRCRL---------------KPLERR----------------R-KRQHQRCLAHSLVGTPNYI 211 (376)
T ss_pred c---cccccc---ccccccccc---------------cchhhh----------------h-hhhcccccccccCCCcccc
Confidence 0 000000 000000000 000000 0 0000001113568999999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc---CCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD---RILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~---~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|||++.+..++.++|||||||+||||++|..||.... .....+.. ....+......+.+.+||.+|+ .+|.+|+
T Consensus 212 aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~ 290 (376)
T cd05598 212 APEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRL 290 (376)
T ss_pred CHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcC
Confidence 9999999899999999999999999999999984322 11222222 1122223345678889999977 5999999
Q ss_pred ---ChhHHhhhHHHHhhHh
Q 002843 575 ---TTREILQSEVTNEFQE 590 (874)
Q Consensus 575 ---Ta~EiL~hp~~~~~~~ 590 (874)
++.++++||||+.+..
T Consensus 291 ~~~t~~ell~h~~~~~~~~ 309 (376)
T cd05598 291 GKNGADEIKAHPFFKGIDF 309 (376)
T ss_pred CCCCHHHHhCCCCcCCCCH
Confidence 9999999999987543
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=299.30 Aligned_cols=218 Identities=15% Similarity=0.129 Sum_probs=158.0
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQ 337 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I~~Q 337 (874)
.+..++....||+++.+............ .. ..-.+++||||++ +|.+++.. .+..+++..++.|+.|
T Consensus 108 ~Ei~il~~l~h~niv~l~~~~~~~~~~~~----~~----~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~q 178 (440)
T PTZ00036 108 RELLIMKNLNHINIIFLKDYYYTECFKKN----EK----NIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQ 178 (440)
T ss_pred HHHHHHHhcCCCCCcceeeeEeecccccC----CC----ceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHH
Confidence 35567778889999987654321111000 00 0012579999985 78887753 3447999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCC-cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~-~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
|+.||+|||++|||||||||+|||++.++ .+||+|||+++.+...
T Consensus 179 i~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~---------------------------------- 224 (440)
T PTZ00036 179 LCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAG---------------------------------- 224 (440)
T ss_pred HHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCC----------------------------------
Confidence 99999999999999999999999998665 6999999998743200
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
......+||+
T Consensus 225 ----------------------------------------------------------------------~~~~~~~~t~ 234 (440)
T PTZ00036 225 ----------------------------------------------------------------------QRSVSYICSR 234 (440)
T ss_pred ----------------------------------------------------------------------CCcccCCCCc
Confidence 0002346789
Q ss_pred cccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhc-------------------CCCCC-----
Q 002843 497 WYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRD-------------------RILPP----- 549 (874)
Q Consensus 497 ~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~-------------------~~lpp----- 549 (874)
.|+|||++.+. .|+.++|||||||+||||++|.+||..... .+..+.. ..+|.
T Consensus 235 ~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 314 (440)
T PTZ00036 235 FYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKD 314 (440)
T ss_pred CccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchh
Confidence 99999998764 589999999999999999999999843211 1111100 00010
Q ss_pred ---CCC-CCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 550 ---SFL-SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 550 ---~~~-~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
.++ ...+.+.+||.+||.+||.+|||+.|+|+||||..+++.
T Consensus 315 l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~ 360 (440)
T PTZ00036 315 LKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDP 360 (440)
T ss_pred HHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhcc
Confidence 011 134568899999999999999999999999999987754
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-31 Score=288.04 Aligned_cols=201 Identities=15% Similarity=0.132 Sum_probs=159.4
Q ss_pred hcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002843 268 SNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT 347 (874)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs 347 (874)
...||+++.+......... .+++||||+|++|..++.+.+ .+++.++..++.||+.||+|||+
T Consensus 52 ~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~ 114 (318)
T cd05570 52 AGKHPFLTQLHSCFQTKDR----------------LFFVMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHE 114 (318)
T ss_pred ccCCCCccceeeEEEcCCE----------------EEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 3478988888776553332 257999999999999998775 79999999999999999999999
Q ss_pred CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccccc
Q 002843 348 QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427 (874)
Q Consensus 348 ~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~ 427 (874)
+||+||||||+|||++.++.+||+|||+++.....
T Consensus 115 ~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------------------------------------------- 149 (318)
T cd05570 115 RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--------------------------------------------- 149 (318)
T ss_pred CCeEccCCCHHHeEECCCCcEEecccCCCeecCcC---------------------------------------------
Confidence 99999999999999999999999999987631100
Q ss_pred ccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC
Q 002843 428 SLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG 507 (874)
Q Consensus 428 ~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~ 507 (874)
.......+||+.|+|||++.+.
T Consensus 150 ----------------------------------------------------------~~~~~~~~g~~~y~aPE~~~~~ 171 (318)
T cd05570 150 ----------------------------------------------------------GVTTSTFCGTPDYIAPEILSYQ 171 (318)
T ss_pred ----------------------------------------------------------CCcccceecCccccCHHHhcCC
Confidence 0000234688999999999998
Q ss_pred CCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh-----hHHh
Q 002843 508 VCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REIL 580 (874)
Q Consensus 508 ~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa-----~EiL 580 (874)
.++.++|||||||++|||++|..||... ......+...... ......+.+.+||.+||+.||.+||++ .+++
T Consensus 172 ~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll 250 (318)
T cd05570 172 PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVR-YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIK 250 (318)
T ss_pred CCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC-CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHh
Confidence 9999999999999999999999998432 2222333322111 112245678999999999999999999 9999
Q ss_pred hhHHHHhhH
Q 002843 581 QSEVTNEFQ 589 (874)
Q Consensus 581 ~hp~~~~~~ 589 (874)
.||||+...
T Consensus 251 ~~~~~~~~~ 259 (318)
T cd05570 251 GHPFFREID 259 (318)
T ss_pred cCCCcCCCC
Confidence 999998754
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=291.80 Aligned_cols=206 Identities=17% Similarity=0.181 Sum_probs=156.0
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+.+++....|++++.++........ .+++|||+. ++|.+++......+++.+++.|+.||+.
T Consensus 106 ~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~ 168 (357)
T PHA03209 106 IEAMLLQNVNHPSVIRMKDTLVSGAI----------------TCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILE 168 (357)
T ss_pred HHHHHHHhCCCCCCcChhheEEeCCe----------------eEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 35667888899999988877554333 256999996 6999999876668999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||.|||++|||||||||+|||++..+.+||+|||+++.....
T Consensus 169 aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-------------------------------------- 210 (357)
T PHA03209 169 GLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-------------------------------------- 210 (357)
T ss_pred HHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC--------------------------------------
Confidence 999999999999999999999999999999999987621100
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
.......||+.|+|
T Consensus 211 ------------------------------------------------------------------~~~~~~~gt~~y~a 224 (357)
T PHA03209 211 ------------------------------------------------------------------PAFLGLAGTVETNA 224 (357)
T ss_pred ------------------------------------------------------------------cccccccccccccC
Confidence 00023468899999
Q ss_pred cccccCCCCCCccchhHHHHHHHHhcCCCCc-hHH--------H---HHHHHH-hhc-CCCCCCCC--------------
Q 002843 501 PEELSGGVCTTSSNIYSLGVLFFELFGRFDS-ERA--------L---AAAMSD-LRD-RILPPSFL-------------- 552 (874)
Q Consensus 501 PEvl~g~~ys~kSDIwSLGVIL~ELltG~~p-~~~--------~---~~~~~~-l~~-~~lpp~~~-------------- 552 (874)
||++.+..++.++|||||||++|||+++..+ |.. . ...+.. +.. +..|..+.
T Consensus 225 PE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (357)
T PHA03209 225 PEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEY 304 (357)
T ss_pred CeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhh
Confidence 9999998999999999999999999985322 210 0 000111 111 11111111
Q ss_pred -----------------CCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 553 -----------------SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 553 -----------------~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
.....+.+||.+||.+||.+|||+.|+|+||||+.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 305 ASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred cccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 12234567999999999999999999999999975
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=287.73 Aligned_cols=201 Identities=15% Similarity=0.130 Sum_probs=159.4
Q ss_pred HhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Q 002843 266 VASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYH 345 (874)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yL 345 (874)
+....||+++.+......... .+++||||+|++|..++... .+++.+++.|+.||+.||+||
T Consensus 56 ~~~l~hp~i~~~~~~~~~~~~----------------~~lv~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~l 117 (324)
T cd05589 56 ANSERHPFLVNLFACFQTEDH----------------VCFVMEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYL 117 (324)
T ss_pred ccccCCCChhceeeEEEcCCE----------------EEEEEcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHH
Confidence 455679999888776543332 25799999999999998654 699999999999999999999
Q ss_pred HHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccc
Q 002843 346 HTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSR 425 (874)
Q Consensus 346 Hs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~ 425 (874)
|++||+||||||+|||++.++.+||+|||+++.....
T Consensus 118 H~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~------------------------------------------- 154 (324)
T cd05589 118 HENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF------------------------------------------- 154 (324)
T ss_pred HhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC-------------------------------------------
Confidence 9999999999999999999999999999987632100
Q ss_pred ccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccccc
Q 002843 426 WWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS 505 (874)
Q Consensus 426 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~ 505 (874)
. ......+||+.|+|||++.
T Consensus 155 ----------------~--------------------------------------------~~~~~~~g~~~y~aPE~~~ 174 (324)
T cd05589 155 ----------------G--------------------------------------------DRTSTFCGTPEFLAPEVLT 174 (324)
T ss_pred ----------------C--------------------------------------------CcccccccCccccCHhHhc
Confidence 0 0002457889999999999
Q ss_pred CCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCCC-----Chh
Q 002843 506 GGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTR 577 (874)
Q Consensus 506 g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP-----Ta~ 577 (874)
+..++.++|||||||++|||++|..||... ......+.. ....+ ....+.+.+||.+||+.||.+|| ++.
T Consensus 175 ~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~ 252 (324)
T cd05589 175 ETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP--RFLSREAISIMRRLLRRNPERRLGSGEKDAE 252 (324)
T ss_pred CCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHH
Confidence 988999999999999999999999998432 222333322 22111 22357788999999999999999 689
Q ss_pred HHhhhHHHHhhH
Q 002843 578 EILQSEVTNEFQ 589 (874)
Q Consensus 578 EiL~hp~~~~~~ 589 (874)
++++||||+.+.
T Consensus 253 ~l~~~~~f~~~~ 264 (324)
T cd05589 253 DVKKQPFFRDIN 264 (324)
T ss_pred HHhhCCCcCCCC
Confidence 999999998754
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=292.68 Aligned_cols=210 Identities=16% Similarity=0.093 Sum_probs=164.2
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..+++...||+++.+......+.. .+++||||+||+|.+++... .+++..+..++.||+
T Consensus 91 ~~e~~il~~~~h~~iv~~~~~~~~~~~----------------~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~ 152 (370)
T cd05596 91 WEERDIMAHANSEWIVQLHYAFQDDKY----------------LYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVV 152 (370)
T ss_pred HHHHHHHHhCCCCCcceEEEEEecCCE----------------EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHH
Confidence 345567778889999888765443222 25799999999999999765 589999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 153 ~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~----------------------------------- 197 (370)
T cd05596 153 LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM----------------------------------- 197 (370)
T ss_pred HHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc-----------------------------------
Confidence 999999999999999999999999999999999999863220000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
......+||+.|+
T Consensus 198 -------------------------------------------------------------------~~~~~~~gt~~y~ 210 (370)
T cd05596 198 -------------------------------------------------------------------VRCDTAVGTPDYI 210 (370)
T ss_pred -------------------------------------------------------------------ccCCCCCCCcCeE
Confidence 0002347899999
Q ss_pred CcccccCC----CCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcC---CCCCCCCCCCHHHHHHHHHccccCC
Q 002843 500 SPEELSGG----VCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDR---ILPPSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 500 APEvl~g~----~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~---~lpp~~~~~~p~l~dLi~~cL~~dP 570 (874)
|||++.+. .++.++|||||||+||||++|..||... ...+..+... ...+.....+..+.+||.+||..+|
T Consensus 211 aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p 290 (370)
T cd05596 211 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDRE 290 (370)
T ss_pred CHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChh
Confidence 99998753 3789999999999999999999998532 2223344332 2223333456788999999999999
Q ss_pred CC--CCChhHHhhhHHHHhhH
Q 002843 571 LS--RPTTREILQSEVTNEFQ 589 (874)
Q Consensus 571 ~~--RPTa~EiL~hp~~~~~~ 589 (874)
.+ |+++.|+++||||....
T Consensus 291 ~r~~R~s~~ell~h~~~~~~~ 311 (370)
T cd05596 291 VRLGRNGVDEIKSHPFFKNDQ 311 (370)
T ss_pred hccCCCCHHHHhcCcccCCCC
Confidence 88 99999999999998643
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=300.82 Aligned_cols=220 Identities=18% Similarity=0.177 Sum_probs=178.2
Q ss_pred cCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCC--C
Q 002843 250 TTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKG--K 327 (874)
Q Consensus 250 ~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~l--s 327 (874)
.+..-+....-.+-+|-....|.|||..+..+..+|... +.||.++||+|.++|+....++ +
T Consensus 610 ekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~k----------------IFMEqVPGGSLSsLLrskWGPlKDN 673 (1226)
T KOG4279|consen 610 EKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFK----------------IFMEQVPGGSLSSLLRSKWGPLKDN 673 (1226)
T ss_pred cccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEE----------------EEeecCCCCcHHHHHHhccCCCccc
Confidence 333344455667778889999999999988866666433 4899999999999999877678 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEe-cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhcc
Q 002843 328 RIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL-QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFT 406 (874)
Q Consensus 328 e~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~-~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg 406 (874)
+..+-.+-+||++||.|||.+.|||||||-+|+|++ -+|.+||+|||.++.+.
T Consensus 674 Estm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA-------------------------- 727 (1226)
T KOG4279|consen 674 ESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA-------------------------- 727 (1226)
T ss_pred hhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc--------------------------
Confidence 999999999999999999999999999999999997 57999999999988654
Q ss_pred ccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccc
Q 002843 407 TGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQS 486 (874)
Q Consensus 407 ~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~ 486 (874)
|+...+
T Consensus 728 ----------------------------ginP~T---------------------------------------------- 733 (1226)
T KOG4279|consen 728 ----------------------------GINPCT---------------------------------------------- 733 (1226)
T ss_pred ----------------------------cCCccc----------------------------------------------
Confidence 111111
Q ss_pred cccccccccccccCcccccCCC--CCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhh-cCCCCCCCCCCCHHHHH
Q 002843 487 TSVSEQLEEKWYASPEELSGGV--CTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLR-DRILPPSFLSENPKEAG 560 (874)
Q Consensus 487 ~~~t~~~GT~~Y~APEvl~g~~--ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~-~~~lpp~~~~~~p~l~d 560 (874)
-+..||..|||||++..++ |+.++|||||||++.||.||++||.+.. ++|-.+- -...||...+.+.+...
T Consensus 734 ---ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~ 810 (1226)
T KOG4279|consen 734 ---ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKN 810 (1226)
T ss_pred ---cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHH
Confidence 2457899999999999765 9999999999999999999999994322 2233332 23445555556677889
Q ss_pred HHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 561 FCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 561 Li~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
||++|+.+||..||+|.++|+.||++..
T Consensus 811 FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 811 FILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred HHHHHcCCCcccCccHHHhccCcccccC
Confidence 9999999999999999999999999865
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=293.64 Aligned_cols=210 Identities=17% Similarity=0.090 Sum_probs=163.0
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......+.. .+++||||+||+|.+++... .+++.++..++.||
T Consensus 90 ~~~e~~i~~~~~hp~iv~~~~~~~~~~~----------------~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qi 151 (370)
T cd05621 90 FWEERDIMAFANSPWVVQLFCAFQDDKY----------------LYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEV 151 (370)
T ss_pred HHHHHHHHHhCCCCCEeeEEEEEEcCCE----------------EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHH
Confidence 4456677888899999998876553332 25699999999999999765 58999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 152 l~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~---------------------------------- 197 (370)
T cd05621 152 VLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM---------------------------------- 197 (370)
T ss_pred HHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCc----------------------------------
Confidence 9999999999999999999999999999999999999864320000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......+||+.|
T Consensus 198 --------------------------------------------------------------------~~~~~~~gt~~Y 209 (370)
T cd05621 198 --------------------------------------------------------------------VRCDTAVGTPDY 209 (370)
T ss_pred --------------------------------------------------------------------eecccCCCCccc
Confidence 000245789999
Q ss_pred cCcccccCCC----CCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCC---CCCCCCCCCHHHHHHHHHccccC
Q 002843 499 ASPEELSGGV----CTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRI---LPPSFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 499 ~APEvl~g~~----ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~---lpp~~~~~~p~l~dLi~~cL~~d 569 (874)
+|||++.+.. ++.++|||||||+||||++|..||.... ..+..+.... ..|........+.+++.+||..+
T Consensus 210 ~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~ 289 (370)
T cd05621 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDR 289 (370)
T ss_pred CCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCc
Confidence 9999997643 7899999999999999999999984322 2233333321 12222344677889999999865
Q ss_pred CCC--CCChhHHhhhHHHHhh
Q 002843 570 PLS--RPTTREILQSEVTNEF 588 (874)
Q Consensus 570 P~~--RPTa~EiL~hp~~~~~ 588 (874)
|.+ |+++.|+++||||+..
T Consensus 290 ~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 290 EVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred hhccCCCCHHHHhcCcccCCC
Confidence 543 8999999999999864
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-31 Score=293.15 Aligned_cols=247 Identities=13% Similarity=0.094 Sum_probs=168.1
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+..++....|++++.+......+.. .+++||||+||+|.+++.+.+ .+++..++.|+.||+.
T Consensus 50 ~e~~~l~~l~~~~iv~~~~~~~~~~~----------------~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~ 112 (360)
T cd05627 50 AERDILVEADGAWVVKMFYSFQDKRN----------------LYLIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVL 112 (360)
T ss_pred HHHHHHHhCCCCCEeeEEEEEEcCCE----------------EEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHH
Confidence 34456667788888887766553332 256999999999999998765 7999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||+|||++||+||||||+|||++.++.+||+|||+++.+......... +.. ...
T Consensus 113 ~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~-------~~~-------------------~~~ 166 (360)
T cd05627 113 AIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY-------RNL-------------------THN 166 (360)
T ss_pred HHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc-------ccc-------------------ccC
Confidence 999999999999999999999999999999999998754311000000 000 000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
...+......+... .. ..+ ... ........+||+.|+|
T Consensus 167 -----------~~~~~~~~~~~~~~------------~~--------~~~---------~~~--~~~~~~~~~gt~~Y~A 204 (360)
T cd05627 167 -----------PPSDFSFQNMNSKR------------KA--------ETW---------KKN--RRQLAYSTVGTPDYIA 204 (360)
T ss_pred -----------Cccccccccccccc------------cc--------ccc---------ccc--ccccccccCCCccccC
Confidence 00000000000000 00 000 000 0011135689999999
Q ss_pred cccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc---CCCCCCCCCCCHHHHHHHHHccccCCCCCC-
Q 002843 501 PEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD---RILPPSFLSENPKEAGFCLWQLHPEPLSRP- 574 (874)
Q Consensus 501 PEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~---~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP- 574 (874)
||++.+..++.++|||||||+||||++|..||... ......+.. ....|.....++.+.+||.+|+. +|.+|+
T Consensus 205 PE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~ 283 (360)
T cd05627 205 PEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIG 283 (360)
T ss_pred HHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCC
Confidence 99999989999999999999999999999998432 222333332 12122223356788899999874 999998
Q ss_pred --ChhHHhhhHHHHhhHhhhh
Q 002843 575 --TTREILQSEVTNEFQEVCA 593 (874)
Q Consensus 575 --Ta~EiL~hp~~~~~~~~~~ 593 (874)
++.|+++||||+.+.+...
T Consensus 284 ~~~~~ei~~hp~f~~~~~~~~ 304 (360)
T cd05627 284 SNGVEEIKSHPFFEGVDWGHI 304 (360)
T ss_pred CCCHHHHhcCCCCCCCCHHHH
Confidence 4799999999998765543
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=276.03 Aligned_cols=210 Identities=19% Similarity=0.172 Sum_probs=154.2
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQI 338 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QI 338 (874)
+..-..+....||+++.+.+......... ....+++|||+.+ +|.+++.... ..+++.+++.++.||
T Consensus 50 ~~~l~~l~~~~h~ni~~~~~~~~~~~~~~-----------~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi 117 (288)
T cd07863 50 VALLKRLEAFDHPNIVRLMDVCATSRTDR-----------ETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQF 117 (288)
T ss_pred HHHHHHhhhcCCCCeeeeeeeeccccCCC-----------CceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 33333444557999888876543211100 0013679999985 9999997643 359999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 118 ~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~------------------------------------ 161 (288)
T cd07863 118 LRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQ------------------------------------ 161 (288)
T ss_pred HHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccCc------------------------------------
Confidence 99999999999999999999999999999999999987632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......||..|
T Consensus 162 --------------------------------------------------------------------~~~~~~~~~~~y 173 (288)
T cd07863 162 --------------------------------------------------------------------MALTPVVVTLWY 173 (288)
T ss_pred --------------------------------------------------------------------ccCCCccccccc
Confidence 000234678899
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc-------CCCC-----------C--------C
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD-------RILP-----------P--------S 550 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~-------~~lp-----------p--------~ 550 (874)
+|||++.+..++.++|||||||++|||++|.+||.... ..+..+.. ..++ + .
T Consensus 174 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (288)
T cd07863 174 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSV 253 (288)
T ss_pred cCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHh
Confidence 99999998889999999999999999999998873211 11111110 0000 0 0
Q ss_pred CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 551 ~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
.......+.+|+.+||++||++|||+.|+|.||||
T Consensus 254 ~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 254 VPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred CcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 11233557899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=283.99 Aligned_cols=212 Identities=17% Similarity=0.176 Sum_probs=153.7
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC--------CCCCCHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR--------GHKGKRIE 330 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~--------~~~lse~e 330 (874)
...+..++....||+++.+........... .+++|||++ ++|.+++... ...+++..
T Consensus 45 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--------------~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~ 109 (317)
T cd07867 45 ACREIALLRELKHPNVIALQKVFLSHSDRK--------------VWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSM 109 (317)
T ss_pred HHHHHHHHHhCCCCCeeeEEEEEeccCCCe--------------EEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHH
Confidence 345667788889999998877654322211 267999998 5888888532 12588999
Q ss_pred HHHHHHHHHHHHHHHHHCCCcccCCCCCceEE----ecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhcc
Q 002843 331 CLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL----LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFT 406 (874)
Q Consensus 331 ~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL----~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg 406 (874)
++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 110 ~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~---------------------- 167 (317)
T cd07867 110 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK---------------------- 167 (317)
T ss_pred HHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcc----------------------
Confidence 99999999999999999999999999999999 4567899999999874320000
Q ss_pred ccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccc
Q 002843 407 TGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQS 486 (874)
Q Consensus 407 ~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~ 486 (874)
..
T Consensus 168 ------------------------------------------------------------------------------~~ 169 (317)
T cd07867 168 ------------------------------------------------------------------------------PL 169 (317)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred cccccccccccccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHHH-----------H---------------
Q 002843 487 TSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAAA-----------M--------------- 539 (874)
Q Consensus 487 ~~~t~~~GT~~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~-----------~--------------- 539 (874)
.......||+.|+|||++.+. .++.++|||||||++|||++|.+||...... +
T Consensus 170 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (317)
T cd07867 170 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDW 249 (317)
T ss_pred cccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhh
Confidence 001345788999999999874 4899999999999999999999887421100 0
Q ss_pred HHhhcC-------------CC---------CCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 540 SDLRDR-------------IL---------PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 540 ~~l~~~-------------~l---------pp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
..+... .. ..........+.+||.+||..||.+|||+.|+|+||||
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 250 EDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 000000 00 00001123457789999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-31 Score=289.59 Aligned_cols=212 Identities=17% Similarity=0.161 Sum_probs=166.4
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.+...+..++....||+++.+......++. .+++||||+|++|.+++.+.. .+++.+++.|+.
T Consensus 43 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ 105 (318)
T cd05582 43 VRTKMERDILAEVNHPFIVKLHYAFQTEGK----------------LYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLA 105 (318)
T ss_pred HHHHHHHHHHHhCCCCCcccEEEEEEcCCE----------------EEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHH
Confidence 334455667888889999998776553332 256999999999999997765 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 106 qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--------------------------------- 152 (318)
T cd05582 106 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--------------------------------- 152 (318)
T ss_pred HHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC---------------------------------
Confidence 99999999999999999999999999999999999999876322000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......||+
T Consensus 153 ----------------------------------------------------------------------~~~~~~~g~~ 162 (318)
T cd05582 153 ----------------------------------------------------------------------KKAYSFCGTV 162 (318)
T ss_pred ----------------------------------------------------------------------CceecccCCh
Confidence 0002346889
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
.|+|||++.+..++.++|||||||++|||++|..||... ...+..+...... ......+.+.+||.+||++||++||
T Consensus 163 ~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~-~p~~~~~~~~~li~~~l~~~P~~R~ 241 (318)
T cd05582 163 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLG-MPQFLSPEAQSLLRALFKRNPANRL 241 (318)
T ss_pred hhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHhHcC
Confidence 999999999888999999999999999999999998432 2223333222111 1122457789999999999999999
Q ss_pred C-----hhHHhhhHHHHhhH
Q 002843 575 T-----TREILQSEVTNEFQ 589 (874)
Q Consensus 575 T-----a~EiL~hp~~~~~~ 589 (874)
+ +.+++.||||....
T Consensus 242 ~a~~~~~~~~~~~~~~~~~~ 261 (318)
T cd05582 242 GAGPDGVEEIKRHPFFSTID 261 (318)
T ss_pred CCCCCCHHHHhCCCCcCCCC
Confidence 9 56699999998653
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-31 Score=313.33 Aligned_cols=198 Identities=29% Similarity=0.409 Sum_probs=161.8
Q ss_pred CceEeeccCCCCHHHHHHhCCCCC-CHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKG-KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~l-se~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
.+++||||+.-+|++++..+. .. ....++++|+||++||+|+|++|||||||||.||+|++.+.|||.|||+|.....
T Consensus 671 LYIQMEyCE~~ll~~iI~~N~-~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~ 749 (1351)
T KOG1035|consen 671 LYIQMEYCEKTLLRDIIRRNH-FNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKE 749 (1351)
T ss_pred EEEEHhhhhhhHHHHHHHhcc-cchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhh
Confidence 478999999888888887764 22 4889999999999999999999999999999999999999999999999985330
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
. ..+. .+. .+++.
T Consensus 750 ~--------------------~~~~-------d~~-----------~~~~~----------------------------- 762 (1351)
T KOG1035|consen 750 N--------------------LESI-------DQD-----------LSFST----------------------------- 762 (1351)
T ss_pred h--------------------hhhH-------hhc-----------cCccc-----------------------------
Confidence 0 0000 000 00000
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCC---CCCccchhHHHHHHHHhcCCCCchHHHHHH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV---CTTSSNIYSLGVLFFELFGRFDSERALAAA 538 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~---ys~kSDIwSLGVIL~ELltG~~p~~~~~~~ 538 (874)
.....+....|..+||.-|+|||++.+.. |+.|+||||||||||||+..|.+.++....
T Consensus 763 ------------------~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~i 824 (1351)
T KOG1035|consen 763 ------------------NRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASI 824 (1351)
T ss_pred ------------------cccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHH
Confidence 00000111237889999999999998854 999999999999999999999999999999
Q ss_pred HHHhhcCCCCCC---CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHH
Q 002843 539 MSDLRDRILPPS---FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (874)
Q Consensus 539 ~~~l~~~~lpp~---~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~ 586 (874)
+..|+.+.+|.. +....+..+.+|+|||..||.+||||.|+|++.|+-
T Consensus 825 L~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 825 LTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 999999988887 777778999999999999999999999999999988
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=286.31 Aligned_cols=213 Identities=15% Similarity=0.234 Sum_probs=160.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...+....||+++.+.+......... .....+++||++ |++|.++++.. .+++.+++.|+.||
T Consensus 61 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----------~~~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi 127 (343)
T cd07878 61 TYRELRLLKHMKHENVIGLLDVFTPATSIE----------NFNEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQL 127 (343)
T ss_pred HHHHHHHHHhcCCCchhhhhhhhccccccc----------ccCcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHH
Confidence 345667788888999988876543222111 111246799988 78999988754 59999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 128 ~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~------------------------------------- 170 (343)
T cd07878 128 LRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD------------------------------------- 170 (343)
T ss_pred HHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCC-------------------------------------
Confidence 9999999999999999999999999999999999998763220
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.....+||++|
T Consensus 171 ---------------------------------------------------------------------~~~~~~~t~~y 181 (343)
T cd07878 171 ---------------------------------------------------------------------EMTGYVATRWY 181 (343)
T ss_pred ---------------------------------------------------------------------CcCCccccccc
Confidence 00234678999
Q ss_pred cCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc-------------------------CCCC--
Q 002843 499 ASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD-------------------------RILP-- 548 (874)
Q Consensus 499 ~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~-------------------------~~lp-- 548 (874)
+|||++.+ ..++.++|||||||++|+|++|..||.... ..+..+.. ...+
T Consensus 182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (343)
T cd07878 182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQ 261 (343)
T ss_pred cCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccch
Confidence 99999987 468999999999999999999988873211 11111100 0000
Q ss_pred ---CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 549 ---PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 549 ---p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
..+....+.+.+|+.+||++||.+|||+.|+|+||||.....
T Consensus 262 ~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 262 DLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred hHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence 011233466789999999999999999999999999987544
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=290.98 Aligned_cols=208 Identities=15% Similarity=0.183 Sum_probs=171.1
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
..++...||.+++++.+.-++++..+ ..|||.||-....+-.-++.|++.++..+++|+|.||.
T Consensus 81 eILa~CdHP~ivkLl~ayy~enkLwi----------------liEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn 144 (1187)
T KOG0579|consen 81 EILAECDHPVIVKLLSAYYFENKLWI----------------LIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALN 144 (1187)
T ss_pred hhhhcCCChHHHHHHHHHhccCceEE----------------EEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 56788889999999998777776554 79999999999999888889999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
|||+++|||||||..|||++-+|.++|+|||.+..... ..
T Consensus 145 ~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-------------------------------t~--------- 184 (1187)
T KOG0579|consen 145 WLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-------------------------------TR--------- 184 (1187)
T ss_pred HHhhcchhhhhccccceEEEecCcEeeecccccccchh-------------------------------HH---------
Confidence 99999999999999999999999999999998642210 00
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
....+.+|||+|||||+
T Consensus 185 ---------------------------------------------------------------qkRDsFIGTPYWMAPEV 201 (1187)
T KOG0579|consen 185 ---------------------------------------------------------------QKRDSFIGTPYWMAPEV 201 (1187)
T ss_pred ---------------------------------------------------------------hhhccccCCcccccchh
Confidence 00135689999999998
Q ss_pred ccC-----CCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhc-CCCCCCCCCCC---HHHHHHHHHccccCCCCCC
Q 002843 504 LSG-----GVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRD-RILPPSFLSEN---PKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 504 l~g-----~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~-~~lpp~~~~~~---p~l~dLi~~cL~~dP~~RP 574 (874)
... .+|++++||||||++|.||.-+-+|..+...+.-.|.- .--||.++..+ ..+.||+.+||..||..||
T Consensus 202 vmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp 281 (1187)
T KOG0579|consen 202 VMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRP 281 (1187)
T ss_pred eeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCC
Confidence 775 57999999999999999999999998765543222221 23344443332 4588999999999999999
Q ss_pred ChhHHhhhHHHHhhHh
Q 002843 575 TTREILQSEVTNEFQE 590 (874)
Q Consensus 575 Ta~EiL~hp~~~~~~~ 590 (874)
+++++|+|||+.....
T Consensus 282 ~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 282 PAAQLLKHPFVQNAPS 297 (1187)
T ss_pred CHHHHhhCcccccCCc
Confidence 9999999999986553
|
|
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=278.54 Aligned_cols=212 Identities=15% Similarity=0.175 Sum_probs=161.2
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+.+....+.. .+++|||++ ++|.+++......+++..++.++.||
T Consensus 51 ~~~E~~~l~~l~h~nI~~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi 113 (301)
T cd07873 51 AIREVSLLKDLKHANIVTLHDIIHTEKS----------------LTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQL 113 (301)
T ss_pred HHHHHHHHHhcCCCCcceEEEEEecCCe----------------EEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 4456677788889999988877553332 257999998 59999998765579999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 114 ~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----------------------------------- 158 (301)
T cd07873 114 LRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT----------------------------------- 158 (301)
T ss_pred HHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-----------------------------------
Confidence 999999999999999999999999999999999999876322000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......+++.|
T Consensus 159 --------------------------------------------------------------------~~~~~~~~~~~y 170 (301)
T cd07873 159 --------------------------------------------------------------------KTYSNEVVTLWY 170 (301)
T ss_pred --------------------------------------------------------------------Ccccccceeecc
Confidence 000123567899
Q ss_pred cCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH--HH---HHhhcCCC-----------------CCCC----
Q 002843 499 ASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA--AM---SDLRDRIL-----------------PPSF---- 551 (874)
Q Consensus 499 ~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~---~~l~~~~l-----------------pp~~---- 551 (874)
+|||++.+. .++.++|||||||++|||++|.+||..... .+ ..+..... .+.+
T Consensus 171 ~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (301)
T cd07873 171 RPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADC 250 (301)
T ss_pred cCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCcccccc
Confidence 999998764 478999999999999999999988742111 11 11100000 0111
Q ss_pred -----CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 552 -----LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 552 -----~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
...++.+.+||.+||++||.+|||+.|+|+||||..+.+
T Consensus 251 ~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~ 294 (301)
T cd07873 251 LHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGE 294 (301)
T ss_pred HHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 123456789999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-30 Score=273.18 Aligned_cols=207 Identities=18% Similarity=0.159 Sum_probs=162.0
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------------
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--------------- 323 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~--------------- 323 (874)
...+...+....||+++.+......+.. .+++|||+++++|.++|....
T Consensus 55 ~~~ei~~l~~l~h~~i~~~~~~~~~~~~----------------~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 118 (283)
T cd05048 55 FRQEAELMSDLQHPNIVCLLGVCTKEQP----------------TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVK 118 (283)
T ss_pred HHHHHHHHHhcCCcccceEEEEEcCCCc----------------eEEEEecCCCCcHHHHHHhcCCCccccccccccccc
Confidence 4455567777889998888776442222 256999999999999997641
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhh
Q 002843 324 HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEE 403 (874)
Q Consensus 324 ~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~ 403 (874)
..+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 119 ~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~------------------- 179 (283)
T cd05048 119 SSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADY------------------- 179 (283)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeecccccc-------------------
Confidence 2588999999999999999999999999999999999999999999999999864320000
Q ss_pred hccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccc
Q 002843 404 MFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQ 483 (874)
Q Consensus 404 dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~ 483 (874)
.
T Consensus 180 -------------------------------------~------------------------------------------ 180 (283)
T cd05048 180 -------------------------------------Y------------------------------------------ 180 (283)
T ss_pred -------------------------------------c------------------------------------------
Confidence 0
Q ss_pred ccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHH
Q 002843 484 QQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAG 560 (874)
Q Consensus 484 ~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~d 560 (874)
.......+++.|+|||.+.+..++.++|||||||++|||++ |..||.. .......+..+..++......+.+.+
T Consensus 181 ---~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 257 (283)
T cd05048 181 ---RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYA 257 (283)
T ss_pred ---cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHH
Confidence 00023355788999999998889999999999999999998 8888732 22334455555555444455678999
Q ss_pred HHHHccccCCCCCCChhHHhhh
Q 002843 561 FCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 561 Li~~cL~~dP~~RPTa~EiL~h 582 (874)
|+.+||..||.+||++.||+++
T Consensus 258 l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 258 LMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-30 Score=285.80 Aligned_cols=214 Identities=14% Similarity=0.167 Sum_probs=159.0
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.+......+.... .....+++|||+++ +|.+++.. .+++..+..++.|
T Consensus 66 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~----------~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~q 131 (359)
T cd07876 66 RAYRELVLLKCVNHKNIISLLNVFTPQKSLE----------EFQDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQ 131 (359)
T ss_pred HHHHHHHHHHhCCCCCEeeeeeeeccCCCcc----------ccceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHH
Confidence 3445667788889999999887654332211 00124689999985 67777743 4899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 132 i~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~----------------------------------- 176 (359)
T cd07876 132 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN----------------------------------- 176 (359)
T ss_pred HHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC-----------------------------------
Confidence 999999999999999999999999999999999999988632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......||+.
T Consensus 177 ---------------------------------------------------------------------~~~~~~~~t~~ 187 (359)
T cd07876 177 ---------------------------------------------------------------------FMMTPYVVTRY 187 (359)
T ss_pred ---------------------------------------------------------------------ccCCCCcccCC
Confidence 00023467899
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH------HH------------------HHhh-c-CCCC---
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA------AM------------------SDLR-D-RILP--- 548 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~------~~------------------~~l~-~-~~lp--- 548 (874)
|+|||++.+..++.++|||||||++|||++|..||..... .+ .... . ...+
T Consensus 188 y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (359)
T cd07876 188 YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGIS 267 (359)
T ss_pred CCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcc
Confidence 9999999998999999999999999999999988742110 00 0000 0 0000
Q ss_pred -----CCC---------CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 549 -----PSF---------LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 549 -----p~~---------~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+.+ ....+.+.+||.+||.+||++|||+.|+|+||||....
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 322 (359)
T cd07876 268 FEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWY 322 (359)
T ss_pred hhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhc
Confidence 000 01235578999999999999999999999999998643
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=267.24 Aligned_cols=208 Identities=17% Similarity=0.139 Sum_probs=164.3
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~Q 337 (874)
...+...++...||+++.+......+.. .+++|||++|++|.+++... +..+++..++.++.|
T Consensus 46 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~ 109 (256)
T cd08529 46 AIDEARVLAKLDSSYIIRYYESFLDKGK----------------LNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQ 109 (256)
T ss_pred HHHHHHHHHhcCCCCeehheeeeccCCE----------------EEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 3444456777789988887776553322 25799999999999999764 447999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||+.||+|+||||+||+++.++.++++|||+++.+....
T Consensus 110 l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~---------------------------------- 155 (256)
T cd08529 110 ILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT---------------------------------- 155 (256)
T ss_pred HHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc----------------------------------
Confidence 9999999999999999999999999999999999999876332000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......|+++
T Consensus 156 ---------------------------------------------------------------------~~~~~~~~~~~ 166 (256)
T cd08529 156 ---------------------------------------------------------------------NFANTIVGTPY 166 (256)
T ss_pred ---------------------------------------------------------------------chhhccccCcc
Confidence 00013356789
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
|+|||++.+..++.++|||||||++|||++|..|+.... .....+.....++......+.+.+++.+||+.+|++||+
T Consensus 167 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~ 246 (256)
T cd08529 167 YLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPD 246 (256)
T ss_pred ccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcC
Confidence 999999999889999999999999999999999874322 223333334444333345577999999999999999999
Q ss_pred hhHHhhhHHH
Q 002843 576 TREILQSEVT 585 (874)
Q Consensus 576 a~EiL~hp~~ 585 (874)
+.++++|||+
T Consensus 247 ~~~ll~~~~~ 256 (256)
T cd08529 247 TFQLLRNPSL 256 (256)
T ss_pred HHHHhhCCCC
Confidence 9999999985
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-30 Score=278.78 Aligned_cols=209 Identities=20% Similarity=0.187 Sum_probs=162.5
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....||+++.+......++.. +++|||++|++|.+++++.+ .+++..+..++.|
T Consensus 45 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~ey~~~~~L~~~l~~~~-~~~~~~~~~~~~~ 107 (308)
T cd06615 45 QIIRELKVLHECNSPYIVGFYGAFYSDGEI----------------SICMEHMDGGSLDQVLKKAG-RIPENILGKISIA 107 (308)
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEeeCCEE----------------EEEeeccCCCcHHHHHHhcC-CCCHHHHHHHHHH
Confidence 345566777778899999998776544432 56999999999999998765 7999999999999
Q ss_pred HHHHHHHHHH-CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 338 IVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 338 Il~aL~yLHs-~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
|+.||+|||+ ++|+||||||+|||++.++.+|++|||++..+...
T Consensus 108 i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---------------------------------- 153 (308)
T cd06615 108 VLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------- 153 (308)
T ss_pred HHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc----------------------------------
Confidence 9999999998 59999999999999999999999999987532200
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
......|++
T Consensus 154 -----------------------------------------------------------------------~~~~~~~~~ 162 (308)
T cd06615 154 -----------------------------------------------------------------------MANSFVGTR 162 (308)
T ss_pred -----------------------------------------------------------------------ccccCCCCc
Confidence 001346778
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH-HHHHhhcC------------------------------
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA-AMSDLRDR------------------------------ 545 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~-~~~~l~~~------------------------------ 545 (874)
.|+|||.+.+..++.++|||||||++|+|++|..|+..... ....+...
T Consensus 163 ~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (308)
T cd06615 163 SYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFEL 242 (308)
T ss_pred CccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHH
Confidence 99999999888899999999999999999999888632111 01111000
Q ss_pred ------CCCCCCC--CCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 546 ------ILPPSFL--SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 546 ------~lpp~~~--~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
..++... ...+.+.+|+.+||..+|++||++.++++||||...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 243 LDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 0011111 134568899999999999999999999999999753
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-30 Score=290.32 Aligned_cols=211 Identities=12% Similarity=0.060 Sum_probs=159.6
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+...+....||+++.++.....+.. .|++||++. ++|.+++...+ .+++.+++.|+.||+.
T Consensus 135 ~E~~il~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~ql~~ 196 (392)
T PHA03207 135 REIDILKTISHRAIINLIHAYRWKST----------------VCMVMPKYK-CDLFTYVDRSG-PLPLEQAITIQRRLLE 196 (392)
T ss_pred HHHHHHHhcCCCCccceeeeEeeCCE----------------EEEEehhcC-CCHHHHHHhcC-CCCHHHHHHHHHHHHH
Confidence 34456677789999988766543332 256999997 69999996554 7999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||.|||++|||||||||+|||++.++.+||+|||+++.+.....
T Consensus 197 aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~------------------------------------ 240 (392)
T PHA03207 197 ALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD------------------------------------ 240 (392)
T ss_pred HHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc------------------------------------
Confidence 99999999999999999999999999999999999864330000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
........||+.|+|
T Consensus 241 -----------------------------------------------------------------~~~~~~~~gt~~y~a 255 (392)
T PHA03207 241 -----------------------------------------------------------------TPQCYGWSGTLETNS 255 (392)
T ss_pred -----------------------------------------------------------------cccccccccccCccC
Confidence 000024578999999
Q ss_pred cccccCCCCCCccchhHHHHHHHHhcCCCCchHHH---------HHHHHHhhc----------------------CC---
Q 002843 501 PEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL---------AAAMSDLRD----------------------RI--- 546 (874)
Q Consensus 501 PEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~---------~~~~~~l~~----------------------~~--- 546 (874)
||++.+..|+.++|||||||+||||++|..||... ......+.. ..
T Consensus 256 PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (392)
T PHA03207 256 PELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPP 335 (392)
T ss_pred HhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCC
Confidence 99999989999999999999999999998887321 011111100 00
Q ss_pred -CCCCC---CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 547 -LPPSF---LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 547 -lpp~~---~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
..+.. ......+.+||.+||.+||++|||+.|+|.||||.....
T Consensus 336 ~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~ 383 (392)
T PHA03207 336 YTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI 383 (392)
T ss_pred ccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence 00111 112346789999999999999999999999999986443
|
|
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=269.44 Aligned_cols=206 Identities=17% Similarity=0.195 Sum_probs=159.8
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++........+... +++||||+|++|.+++...+ .+++.+++.++.||
T Consensus 53 ~~~e~~~~~~l~h~~ii~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i 115 (267)
T cd06645 53 VQQEIIMMKDCKHSNIVAYFGSYLRRDKL----------------WICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRET 115 (267)
T ss_pred HHHHHHHHHhCCCCCeeeEEEEEEeCCEE----------------EEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 34455677777899999888776544332 46999999999999998776 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 116 ~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~------------------------------------ 159 (267)
T cd06645 116 LQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT------------------------------------ 159 (267)
T ss_pred HHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc------------------------------------
Confidence 99999999999999999999999999999999999987632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. .......|+..|
T Consensus 160 ----------------------~---------------------------------------------~~~~~~~~~~~y 172 (267)
T cd06645 160 ----------------------I---------------------------------------------AKRKSFIGTPYW 172 (267)
T ss_pred ----------------------c---------------------------------------------cccccccCcccc
Confidence 0 000234678899
Q ss_pred cCccccc---CCCCCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhcCCCCCCCC---CCCHHHHHHHHHccccC
Q 002843 499 ASPEELS---GGVCTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRDRILPPSFL---SENPKEAGFCLWQLHPE 569 (874)
Q Consensus 499 ~APEvl~---g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~~~lpp~~~---~~~p~l~dLi~~cL~~d 569 (874)
+|||++. ...++.++|||||||++|||++|..|+.... ...........++.+. .....+.+|+.+||..+
T Consensus 173 ~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 252 (267)
T cd06645 173 MAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKN 252 (267)
T ss_pred cChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCC
Confidence 9999975 4458899999999999999999988874321 1111112222222222 23456889999999999
Q ss_pred CCCCCChhHHhhhHH
Q 002843 570 PLSRPTTREILQSEV 584 (874)
Q Consensus 570 P~~RPTa~EiL~hp~ 584 (874)
|++||++.++++|||
T Consensus 253 P~~R~~~~~ll~~~~ 267 (267)
T cd06645 253 PKKRPTAEKLLQHPF 267 (267)
T ss_pred chhCcCHHHHhcCCC
Confidence 999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=270.16 Aligned_cols=209 Identities=14% Similarity=0.090 Sum_probs=156.0
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL 342 (874)
.+.....|++++.+........... .. ...+++||||.+++|.+++... ...+++..+..++.||+.||
T Consensus 55 ~l~~~~~h~~i~~~~~~~~~~~~~~------~~----~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l 124 (272)
T cd06637 55 MLKKYSHHRNIATYYGAFIKKNPPG------MD----DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL 124 (272)
T ss_pred HHHHhcCCCCeeeEeeEEeecCCCC------CC----cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence 3444446899988877654322100 00 0135799999999999999863 34689999999999999999
Q ss_pred HHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 343 ~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
+|||+++|+||||||+||+++.++.+||+|||+++.....
T Consensus 125 ~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~---------------------------------------- 164 (272)
T cd06637 125 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT---------------------------------------- 164 (272)
T ss_pred HHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccc----------------------------------------
Confidence 9999999999999999999999999999999997632200
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
. .......|+..|+|||
T Consensus 165 ------------------~---------------------------------------------~~~~~~~g~~~y~aPE 181 (272)
T cd06637 165 ------------------V---------------------------------------------GRRNTFIGTPYWMAPE 181 (272)
T ss_pred ------------------c---------------------------------------------ccCCcccccccccCHh
Confidence 0 0002456788999999
Q ss_pred cccC-----CCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHH--hhc-CCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 503 ELSG-----GVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSD--LRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 503 vl~g-----~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~--l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
++.+ ..|+.++|||||||++|||++|..|+......... +.. .............+.+||.+||..+|.+||
T Consensus 182 ~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 261 (272)
T cd06637 182 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRP 261 (272)
T ss_pred HhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCC
Confidence 9863 35889999999999999999999988543221111 111 111111123346789999999999999999
Q ss_pred ChhHHhhhHHH
Q 002843 575 TTREILQSEVT 585 (874)
Q Consensus 575 Ta~EiL~hp~~ 585 (874)
|+.+++.||||
T Consensus 262 t~~~il~~~~~ 272 (272)
T cd06637 262 TTEQLMKHPFI 272 (272)
T ss_pred CHHHHhhCCCC
Confidence 99999999997
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-30 Score=281.99 Aligned_cols=183 Identities=16% Similarity=0.160 Sum_probs=147.0
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccc
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESA 383 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~ 383 (874)
+++||||+||+|.+++...+ .+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 77 ~lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 77 YFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred EEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 57999999999999998766 69999999999999999999999999999999999999999999999999876321000
Q ss_pred cCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccccc
Q 002843 384 SLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHT 463 (874)
Q Consensus 384 ~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~ 463 (874)
T Consensus 156 -------------------------------------------------------------------------------- 155 (323)
T cd05615 156 -------------------------------------------------------------------------------- 155 (323)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHH
Q 002843 464 NAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSD 541 (874)
Q Consensus 464 ~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~ 541 (874)
.......||+.|+|||++.+..++.++|||||||++|||++|..||... ......
T Consensus 156 -----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~ 212 (323)
T cd05615 156 -----------------------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQS 212 (323)
T ss_pred -----------------------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0002346889999999999888999999999999999999999998432 122233
Q ss_pred hhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh-----hHHhhhHHHHhhHhh
Q 002843 542 LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNEFQEV 591 (874)
Q Consensus 542 l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa-----~EiL~hp~~~~~~~~ 591 (874)
+...... ......+.+.+|+.+||+.+|.+|+++ .++++||||..+...
T Consensus 213 i~~~~~~-~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~ 266 (323)
T cd05615 213 IMEHNVS-YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWD 266 (323)
T ss_pred HHhCCCC-CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHH
Confidence 3222211 112345678899999999999999974 689999999876543
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=286.92 Aligned_cols=215 Identities=15% Similarity=0.142 Sum_probs=158.8
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+........... .....+++|||+++ +|.+++.. .+++..+..++.
T Consensus 68 ~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~----------~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~ 133 (364)
T cd07875 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE----------EFQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLY 133 (364)
T ss_pred HHHHHHHHHHHhcCCCCccccceeeccccccc----------ccCeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHH
Confidence 34455667888889999998776543221110 00113689999974 88888854 488999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 134 qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~---------------------------------- 179 (364)
T cd07875 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---------------------------------- 179 (364)
T ss_pred HHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC----------------------------------
Confidence 9999999999999999999999999999999999999998632200
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......||+
T Consensus 180 ----------------------------------------------------------------------~~~~~~~~t~ 189 (364)
T cd07875 180 ----------------------------------------------------------------------FMMTPYVVTR 189 (364)
T ss_pred ----------------------------------------------------------------------CcccCCcccC
Confidence 0002346789
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhc-----------------------CC-----
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRD-----------------------RI----- 546 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~-----------------------~~----- 546 (874)
.|+|||++.+..++.++|||||||+||||++|..||..... .+..+.. ..
T Consensus 190 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (364)
T cd07875 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGY 269 (364)
T ss_pred CcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCC
Confidence 99999999998999999999999999999999888732110 0000000 00
Q ss_pred ----CCCC---------CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 547 ----LPPS---------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 547 ----lpp~---------~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+.+. .......+.+||.+||..||.+|||+.|+|+||||+...
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~ 325 (364)
T cd07875 270 SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325 (364)
T ss_pred ChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccccc
Confidence 0000 001124578999999999999999999999999998543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=293.58 Aligned_cols=216 Identities=16% Similarity=0.126 Sum_probs=188.7
Q ss_pred CCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHH
Q 002843 251 TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIE 330 (874)
Q Consensus 251 ~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e 330 (874)
+.+-+..++..+..||.+..|+||+.+++......+..+ .++.|.+..|+|+.|+++.+ .++...
T Consensus 80 q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~i--------------n~iTEL~TSGtLr~Y~kk~~-~vn~ka 144 (632)
T KOG0584|consen 80 QSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTI--------------NFITELFTSGTLREYRKKHR-RVNIKA 144 (632)
T ss_pred cChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCcee--------------eeeeecccCCcHHHHHHHhc-cCCHHH
Confidence 345566889999999999999999999999887777554 56999999999999999987 799999
Q ss_pred HHHHHHHHHHHHHHHHHC--CCcccCCCCCceEEecC-CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccc
Q 002843 331 CLYIFRQIVALVDYHHTQ--GVTFLDLKPSSFKLLQS-NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTT 407 (874)
Q Consensus 331 ~~~I~~QIl~aL~yLHs~--gIIHRDLKPsNILL~~~-~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~ 407 (874)
++.|++||+.||.|||++ -|||||||.+||+|+.+ |.|||.|+|||..+..+
T Consensus 145 ik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s------------------------- 199 (632)
T KOG0584|consen 145 IKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS------------------------- 199 (632)
T ss_pred HHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc-------------------------
Confidence 999999999999999999 49999999999999865 89999999999754310
Q ss_pred cchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccc
Q 002843 408 GIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQST 487 (874)
Q Consensus 408 ~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~ 487 (874)
T Consensus 200 -------------------------------------------------------------------------------- 199 (632)
T KOG0584|consen 200 -------------------------------------------------------------------------------- 199 (632)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH---HHHHHHHhhcCCCCCCCCCCC-HHHHHHHH
Q 002843 488 SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA---LAAAMSDLRDRILPPSFLSEN-PKEAGFCL 563 (874)
Q Consensus 488 ~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~---~~~~~~~l~~~~lpp~~~~~~-p~l~dLi~ 563 (874)
.....+|||.|||||++. ..|+..+||||||++++||+|+-.|+.+ ....++.+..++.|..|.... |.+.+||.
T Consensus 200 ~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIe 278 (632)
T KOG0584|consen 200 HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIE 278 (632)
T ss_pred ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHH
Confidence 003579999999999998 5899999999999999999999999854 445677777888888876554 88999999
Q ss_pred HccccCCCCCCChhHHhhhHHHHhh
Q 002843 564 WQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 564 ~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
+||.. .+.|||+.|+|.||||..-
T Consensus 279 kCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 279 KCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred HHhcC-chhccCHHHHhhChhhccc
Confidence 99999 9999999999999999964
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-30 Score=275.90 Aligned_cols=204 Identities=17% Similarity=0.140 Sum_probs=156.1
Q ss_pred HHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHH
Q 002843 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (874)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~y 344 (874)
++....||+++.+.......+. .+++|||++|++|.+++...+ .+++..+..|+.||+.||+|
T Consensus 50 ~~~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~ 112 (279)
T cd05633 50 LVSTGDCPFIVCMTYAFHTPDK----------------LCFILDLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEH 112 (279)
T ss_pred HHhhCCCCcEeEEEEEEecCCe----------------EEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Confidence 4444567777666555443322 256999999999999998766 69999999999999999999
Q ss_pred HHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccc
Q 002843 345 HHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (874)
Q Consensus 345 LHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~ 424 (874)
||++||+||||||+|||++.++.++++|||++......
T Consensus 113 lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~------------------------------------------ 150 (279)
T cd05633 113 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK------------------------------------------ 150 (279)
T ss_pred HHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc------------------------------------------
Confidence 99999999999999999999999999999987532200
Q ss_pred cccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccc
Q 002843 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (874)
Q Consensus 425 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl 504 (874)
......||..|+|||.+
T Consensus 151 ---------------------------------------------------------------~~~~~~~~~~y~aPE~~ 167 (279)
T cd05633 151 ---------------------------------------------------------------KPHASVGTHGYMAPEVL 167 (279)
T ss_pred ---------------------------------------------------------------CccCcCCCcCccCHHHh
Confidence 00123578899999998
Q ss_pred cC-CCCCCccchhHHHHHHHHhcCCCCchHHHH----HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC-----
Q 002843 505 SG-GVCTTSSNIYSLGVLFFELFGRFDSERALA----AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP----- 574 (874)
Q Consensus 505 ~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~----~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP----- 574 (874)
.+ ..++.++|||||||++|||++|..||.... ...........+.......+.+.+|+.+||+.||++||
T Consensus 168 ~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 247 (279)
T cd05633 168 QKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGR 247 (279)
T ss_pred cCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCC
Confidence 74 458999999999999999999999884321 11111111111111123457789999999999999999
Q ss_pred ChhHHhhhHHHHhhHh
Q 002843 575 TTREILQSEVTNEFQE 590 (874)
Q Consensus 575 Ta~EiL~hp~~~~~~~ 590 (874)
++.|+++||||+++..
T Consensus 248 ~~~~~~~h~~~~~~~~ 263 (279)
T cd05633 248 GAQEVKEHVFFKGIDW 263 (279)
T ss_pred CHHHHHhCccccCCCH
Confidence 6999999999998653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-30 Score=285.90 Aligned_cols=204 Identities=19% Similarity=0.258 Sum_probs=162.8
Q ss_pred hHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Q 002843 264 MMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 264 ~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL 342 (874)
.|+... .+-++|.+++.-+.|+..++ ||||-+ .+|.++|++....++...++.|.+|++.|+
T Consensus 411 ~lL~KLkg~~~IIqL~DYEv~d~~lYm----------------vmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV 473 (677)
T KOG0596|consen 411 ALLNKLKGHDKIIQLYDYEVTDGYLYM----------------VMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAV 473 (677)
T ss_pred HHHHHhcCCceEEEEeeeeccCceEEE----------------Eeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHH
Confidence 344433 44678899998888877665 999776 899999999876666679999999999999
Q ss_pred HHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 343 ~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
.++|.+||||.||||.|||+- .|.+||||||+|+.+..++.
T Consensus 474 ~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT-------------------------------------- 514 (677)
T KOG0596|consen 474 KTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT-------------------------------------- 514 (677)
T ss_pred HHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcccc--------------------------------------
Confidence 999999999999999999986 68999999999985542111
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
+ | .--.++||+.|||||
T Consensus 515 -------------------s---I-----------------------------------------~kdsQvGT~NYMsPE 531 (677)
T KOG0596|consen 515 -------------------S---I-----------------------------------------VKDSQVGTVNYMSPE 531 (677)
T ss_pred -------------------c---e-----------------------------------------eeccccCcccccCHH
Confidence 0 0 003679999999999
Q ss_pred cccCC-----------CCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCC------CCCCCCCHHHHHHHHHc
Q 002843 503 ELSGG-----------VCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILP------PSFLSENPKEAGFCLWQ 565 (874)
Q Consensus 503 vl~g~-----------~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lp------p~~~~~~p~l~dLi~~c 565 (874)
.+... +++.+|||||||||||+|+.|.+||......+..+..-.-| |..... ..+.++++.|
T Consensus 532 Al~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~-~~li~~mK~C 610 (677)
T KOG0596|consen 532 ALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPEN-DELIDVMKCC 610 (677)
T ss_pred HHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCc-hHHHHHHHHH
Confidence 98752 25789999999999999999999998777666655542222 222222 2388999999
Q ss_pred cccCCCCCCChhHHhhhHHHHh
Q 002843 566 LHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 566 L~~dP~~RPTa~EiL~hp~~~~ 587 (874)
|..||.+||+..++|+|||+..
T Consensus 611 L~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 611 LARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred HhcCcccCCCcHHHhcCccccc
Confidence 9999999999999999999886
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=273.10 Aligned_cols=212 Identities=13% Similarity=0.086 Sum_probs=162.3
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....|++++.+......+.. .+++|||++|++|..++.+....+++..++.++.|
T Consensus 48 ~~~~e~~~l~~l~h~~ii~~~~~~~~~~~----------------~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~q 111 (282)
T cd06643 48 DYMVEIDILASCDHPNIVKLLDAFYYENN----------------LWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQ 111 (282)
T ss_pred HHHHHHHHHHHCCCCCeeeEEEEEeeCCE----------------EEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHH
Confidence 34445567777889999888776553332 35799999999999998765557999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||+.||+||||||+|||++.++.+|++|||+++.....
T Consensus 112 i~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~----------------------------------- 156 (282)
T cd06643 112 TLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT----------------------------------- 156 (282)
T ss_pred HHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc-----------------------------------
Confidence 999999999999999999999999999999999999987632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. .......++..
T Consensus 157 -----------------------~---------------------------------------------~~~~~~~~~~~ 168 (282)
T cd06643 157 -----------------------I---------------------------------------------QRRDSFIGTPY 168 (282)
T ss_pred -----------------------c---------------------------------------------ccccccccccc
Confidence 0 00013357789
Q ss_pred ccCccccc-----CCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCC--CCCCCCCHHHHHHHHHcccc
Q 002843 498 YASPEELS-----GGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILP--PSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 498 Y~APEvl~-----g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lp--p~~~~~~p~l~dLi~~cL~~ 568 (874)
|+|||++. +..++.++|||||||++|||++|.+||..... ....+.....+ +........+.+||.+||++
T Consensus 169 y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 248 (282)
T cd06643 169 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEK 248 (282)
T ss_pred ccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccC
Confidence 99999984 34578899999999999999999998753221 12222211111 11223346789999999999
Q ss_pred CCCCCCChhHHhhhHHHHhh
Q 002843 569 EPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~~ 588 (874)
+|.+||++.++++||||...
T Consensus 249 ~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 249 NVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred ChhhCcCHHHHhcCCCEecc
Confidence 99999999999999998753
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=268.47 Aligned_cols=211 Identities=16% Similarity=0.139 Sum_probs=163.5
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+..++....||+++.+.+....... .+++|||++|++|.+++...+ .+++..+..++.||+.
T Consensus 55 ~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~ 117 (267)
T cd06628 55 REIALLKELQHENIVQYLGSSLDADH----------------LNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILK 117 (267)
T ss_pred HHHHHHHhcCCCCeeeEEEEEEeCCc----------------cEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHH
Confidence 34466777789999988776553332 256999999999999998765 7999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||+|||++||+||||+|+||+++.++.++|+|||+++.......
T Consensus 118 ~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------ 161 (267)
T cd06628 118 GLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSL------------------------------------ 161 (267)
T ss_pred HHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccc------------------------------------
Confidence 99999999999999999999999999999999999874330000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
.. . .........|+..|+|
T Consensus 162 -------------------~~---~---------------------------------------~~~~~~~~~~~~~y~~ 180 (267)
T cd06628 162 -------------------ST---K---------------------------------------TNGARPSLQGSVFWMA 180 (267)
T ss_pred -------------------cC---C---------------------------------------ccccccccCCCcCccC
Confidence 00 0 0000023457789999
Q ss_pred cccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhH
Q 002843 501 PEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (874)
Q Consensus 501 PEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~E 578 (874)
||.+.+..++.++|||||||++|+|++|..||..... .+..+.....+.........+.++|.+||+++|.+||++.|
T Consensus 181 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 260 (267)
T cd06628 181 PEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAE 260 (267)
T ss_pred hhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHH
Confidence 9999988899999999999999999999999854222 12222233233323344577899999999999999999999
Q ss_pred HhhhHHH
Q 002843 579 ILQSEVT 585 (874)
Q Consensus 579 iL~hp~~ 585 (874)
+++||||
T Consensus 261 il~~~~~ 267 (267)
T cd06628 261 LLKHPFL 267 (267)
T ss_pred HhhCCCC
Confidence 9999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-30 Score=296.73 Aligned_cols=211 Identities=18% Similarity=0.140 Sum_probs=159.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..+++...|++++.++.....++.. +++||++. ++|.+++......+++.+++.|+.||
T Consensus 207 ~~~E~~iL~~L~HpnIv~l~~~~~~~~~~----------------~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi 269 (461)
T PHA03211 207 SVHEARLLRRLSHPAVLALLDVRVVGGLT----------------CLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQL 269 (461)
T ss_pred HHHHHHHHHHCCCCCCCcEEEEEEECCEE----------------EEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 34566788888999999998765544332 56999996 79999998765579999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++|||||||||+||||+.++.+||+|||+++.......
T Consensus 270 ~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~---------------------------------- 315 (461)
T PHA03211 270 LSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS---------------------------------- 315 (461)
T ss_pred HHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc----------------------------------
Confidence 9999999999999999999999999999999999999863220000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
........||+.|
T Consensus 316 -------------------------------------------------------------------~~~~~~~~GT~~Y 328 (461)
T PHA03211 316 -------------------------------------------------------------------TPFHYGIAGTVDT 328 (461)
T ss_pred -------------------------------------------------------------------cccccccCCCcCC
Confidence 0000234689999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH----------HHHHHHHhhcCC-----CC---------------
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA----------LAAAMSDLRDRI-----LP--------------- 548 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~----------~~~~~~~l~~~~-----lp--------------- 548 (874)
+|||++.+..++.++|||||||+||||++|..++.. .......+.... ++
T Consensus 329 ~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~ 408 (461)
T PHA03211 329 NAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRA 408 (461)
T ss_pred cCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhh
Confidence 999999998999999999999999999886433210 011111111100 00
Q ss_pred -------------CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 549 -------------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 549 -------------p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
..+....+.+.+||.+||..||.+|||+.|+|+||||+.
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 409 ARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred hcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 011123356789999999999999999999999999963
|
|
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-30 Score=287.76 Aligned_cols=211 Identities=16% Similarity=0.073 Sum_probs=163.3
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......+.. .+++||||+||+|.+++... .+++..+..++.||
T Consensus 90 ~~~e~~i~~~~~hp~iv~~~~~~~~~~~----------------~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi 151 (371)
T cd05622 90 FWEERDIMAFANSPWVVQLFYAFQDDRY----------------LYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEV 151 (371)
T ss_pred HHHHHHHHHhCCCCCCCeEEEEEEcCCE----------------EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHH
Confidence 4456677888899999988876553332 25699999999999999765 58999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+||||||+|||++.++.+||+|||+++.+....
T Consensus 152 ~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~----------------------------------- 196 (371)
T cd05622 152 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG----------------------------------- 196 (371)
T ss_pred HHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC-----------------------------------
Confidence 999999999999999999999999999999999999986332000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......+||+.|
T Consensus 197 -------------------------------------------------------------------~~~~~~~~gt~~y 209 (371)
T cd05622 197 -------------------------------------------------------------------MVRCDTAVGTPDY 209 (371)
T ss_pred -------------------------------------------------------------------cccccCcccCccc
Confidence 0000245789999
Q ss_pred cCcccccCCC----CCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCC---CCCCCCCCCHHHHHHHHHccccC
Q 002843 499 ASPEELSGGV----CTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRI---LPPSFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 499 ~APEvl~g~~----ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~---lpp~~~~~~p~l~dLi~~cL~~d 569 (874)
+|||++.+.. ++.++|||||||+||||++|..||.... .....+.... ..+.....++.+.+||.+||..+
T Consensus 210 ~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~ 289 (371)
T cd05622 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDR 289 (371)
T ss_pred cCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCCh
Confidence 9999997642 7899999999999999999999985322 2233333321 12333345677899999999844
Q ss_pred CCC--CCChhHHhhhHHHHhhH
Q 002843 570 PLS--RPTTREILQSEVTNEFQ 589 (874)
Q Consensus 570 P~~--RPTa~EiL~hp~~~~~~ 589 (874)
|.+ |+++.|+++|+||....
T Consensus 290 ~~r~~r~~~~ei~~h~~~~~~~ 311 (371)
T cd05622 290 EVRLGRNGVEEIKRHLFFKNDQ 311 (371)
T ss_pred hhhcCCCCHHHHhcCcccCCCC
Confidence 433 78999999999997643
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-30 Score=276.16 Aligned_cols=212 Identities=14% Similarity=0.159 Sum_probs=162.9
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQI 338 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QI 338 (874)
..+..++....|++++.+......+.. .+++|||++|++|.+++... ...+++.++..++.||
T Consensus 48 ~~E~~il~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi 111 (285)
T cd05630 48 LNEKQILEKVNSRFVVSLAYAYETKDA----------------LCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEI 111 (285)
T ss_pred HHHHHHHHhCCCCCeeeeeEEEecCCE----------------EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 345566777788888777666443322 26799999999999999653 2369999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||+.||+||||||+||+++.++.++++|||++......
T Consensus 112 ~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~------------------------------------ 155 (285)
T cd05630 112 CCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG------------------------------------ 155 (285)
T ss_pred HHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC------------------------------------
Confidence 99999999999999999999999999999999999987532100
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......|+..|
T Consensus 156 --------------------------------------------------------------------~~~~~~~g~~~y 167 (285)
T cd05630 156 --------------------------------------------------------------------QTIKGRVGTVGY 167 (285)
T ss_pred --------------------------------------------------------------------ccccCCCCCccc
Confidence 000134688999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH-----HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA-----AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~-----~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
+|||++.+..++.++|||||||++|||++|..||.... .....+.............+.+.+|+.+||+.||++|
T Consensus 168 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 247 (285)
T cd05630 168 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKER 247 (285)
T ss_pred cChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHc
Confidence 99999999889999999999999999999999985321 1111111111111112345678999999999999999
Q ss_pred CC-----hhHHhhhHHHHhhHhh
Q 002843 574 PT-----TREILQSEVTNEFQEV 591 (874)
Q Consensus 574 PT-----a~EiL~hp~~~~~~~~ 591 (874)
|| +.|+++||||++....
T Consensus 248 ~s~~~~~~~~~~~h~~~~~~~~~ 270 (285)
T cd05630 248 LGCQGGGAREVKEHPLFKQINFK 270 (285)
T ss_pred cCCCCCchHHHHcChhhhccCHH
Confidence 99 8999999999875443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=268.22 Aligned_cols=211 Identities=16% Similarity=0.111 Sum_probs=162.5
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+...+....|++++.+.+....+.. .+++|||++|++|.+++.+.+ .+++..+..++.||+.
T Consensus 51 ~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~ 113 (265)
T cd06631 51 EEVDLLKSLKHVNIVQYLGTCLDDNT----------------ISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILD 113 (265)
T ss_pred HHHHHHHhcCCCCEeeEeeEeecCCe----------------EEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHH
Confidence 34456677788888887776553322 257999999999999998765 6899999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||+|||+.||+|+||||+||+++.++.++++|||+++....... .
T Consensus 114 ~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------~--------------- 158 (265)
T cd06631 114 GVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL--------------------H--------------- 158 (265)
T ss_pred HHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc--------------------c---------------
Confidence 99999999999999999999999999999999998874320000 0
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
.+.. .......|+..|+|
T Consensus 159 --------------------~~~~------------------------------------------~~~~~~~~~~~~~~ 176 (265)
T cd06631 159 --------------------GTHS------------------------------------------NMLKSMHGTPYWMA 176 (265)
T ss_pred --------------------cccc------------------------------------------ccccccCCCccccC
Confidence 0000 00023457889999
Q ss_pred cccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH---HHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCCCCh
Q 002843 501 PEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA---AMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (874)
Q Consensus 501 PEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~---~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa 576 (874)
||++.+..++.++|||||||++|+|++|..||..... ....... ...++........+.+||.+||+++|.+||++
T Consensus 177 pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~ 256 (265)
T cd06631 177 PEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSA 256 (265)
T ss_pred hhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCH
Confidence 9999988899999999999999999999999853221 1111112 23333333445778999999999999999999
Q ss_pred hHHhhhHHH
Q 002843 577 REILQSEVT 585 (874)
Q Consensus 577 ~EiL~hp~~ 585 (874)
.++|+||||
T Consensus 257 ~~~l~~~~~ 265 (265)
T cd06631 257 LQLLRHDFL 265 (265)
T ss_pred HHHhcCCCC
Confidence 999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-30 Score=282.41 Aligned_cols=214 Identities=13% Similarity=0.099 Sum_probs=162.2
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..++....|++++.+......+.. .+++||||+|++|.+++.+.+..+++..+..|+.||+
T Consensus 49 ~~e~~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~ 112 (331)
T cd05597 49 REERDVLVNGDRRWITNLHYAFQDENN----------------LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMV 112 (331)
T ss_pred HHHHHHHHhCCCCCCCceEEEEecCCe----------------EEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 334455666778888887766553332 2569999999999999987555799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||++||+||||||+|||++.++.+||+|||++..+.....
T Consensus 113 ~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~----------------------------------- 157 (331)
T cd05597 113 LAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT----------------------------------- 157 (331)
T ss_pred HHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC-----------------------------------
Confidence 999999999999999999999999999999999998763320000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
......+||+.|+
T Consensus 158 -------------------------------------------------------------------~~~~~~~gt~~y~ 170 (331)
T cd05597 158 -------------------------------------------------------------------VQSNVAVGTPDYI 170 (331)
T ss_pred -------------------------------------------------------------------ccccceecccccc
Confidence 0002346899999
Q ss_pred CcccccC-----CCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc----CCCCCCCCCCCHHHHHHHHHcccc
Q 002843 500 SPEELSG-----GVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD----RILPPSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 500 APEvl~g-----~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~----~~lpp~~~~~~p~l~dLi~~cL~~ 568 (874)
|||++.+ ..++.++|||||||++|||++|..||... ......+.. ..+++.....++.+.+||.+||..
T Consensus 171 aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~ 250 (331)
T cd05597 171 SPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICS 250 (331)
T ss_pred CHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccC
Confidence 9999973 35788999999999999999999998432 122222322 223444444567889999998865
Q ss_pred CCCC--CCChhHHhhhHHHHhhHhh
Q 002843 569 EPLS--RPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 569 dP~~--RPTa~EiL~hp~~~~~~~~ 591 (874)
++.. |+++.++|+||||......
T Consensus 251 ~~~r~~r~~~~~~l~hp~~~~~~~~ 275 (331)
T cd05597 251 PETRLGRNGLQDFKDHPFFEGIDWD 275 (331)
T ss_pred cccccCCCCHHHHhcCCCCCCCCHH
Confidence 4443 7899999999999876543
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-30 Score=283.53 Aligned_cols=211 Identities=12% Similarity=0.088 Sum_probs=161.0
Q ss_pred HHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHH
Q 002843 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (874)
Q Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~a 341 (874)
+..++....|++++.+......+.. .+++||||+||+|.+++.+....+++..++.|+.||+.|
T Consensus 51 e~~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~a 114 (332)
T cd05623 51 ERDVLVNGDNQWITTLHYAFQDENN----------------LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIA 114 (332)
T ss_pred HHHHHhhCCCCCEeeEEEEEecCCE----------------EEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 3455666778887777665443322 257999999999999998754479999999999999999
Q ss_pred HHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccc
Q 002843 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (874)
Q Consensus 342 L~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~ 421 (874)
|+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 115 l~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~-------------------------------------- 156 (332)
T cd05623 115 IDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-------------------------------------- 156 (332)
T ss_pred HHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC--------------------------------------
Confidence 999999999999999999999999999999999876322000
Q ss_pred ccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCc
Q 002843 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (874)
Q Consensus 422 ~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~AP 501 (874)
.......+||+.|+||
T Consensus 157 ----------------------------------------------------------------~~~~~~~~gt~~y~aP 172 (332)
T cd05623 157 ----------------------------------------------------------------TVQSSVAVGTPDYISP 172 (332)
T ss_pred ----------------------------------------------------------------cceecccccCccccCH
Confidence 0000234789999999
Q ss_pred ccccC-----CCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcC----CCCCCCCCCCHHHHHHHHHccccCC
Q 002843 502 EELSG-----GVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDR----ILPPSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 502 Evl~g-----~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~----~lpp~~~~~~p~l~dLi~~cL~~dP 570 (874)
|++.+ ..++.++|||||||+||||++|..||... ...+..+... ..|......++.+.+|+.+||..+|
T Consensus 173 E~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~ 252 (332)
T cd05623 173 EILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSRE 252 (332)
T ss_pred HHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChh
Confidence 99863 45889999999999999999999998432 2223333322 2344444556788999999996654
Q ss_pred CC--CCChhHHhhhHHHHhhHh
Q 002843 571 LS--RPTTREILQSEVTNEFQE 590 (874)
Q Consensus 571 ~~--RPTa~EiL~hp~~~~~~~ 590 (874)
.. |+++.|+++||||.++..
T Consensus 253 ~r~~r~~~~~~~~h~~f~~~~~ 274 (332)
T cd05623 253 HRLGQNGIEDFKQHPFFTGIDW 274 (332)
T ss_pred hhcCCCCHHHHhCCCCcCCCCH
Confidence 44 689999999999987653
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=269.30 Aligned_cols=201 Identities=13% Similarity=0.088 Sum_probs=153.0
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.+......+.. .+++|||+++++|..++......+++..++.|+.|
T Consensus 50 ~~~~~~~~l~~l~hp~iv~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~q 113 (262)
T cd05077 50 AFFETASMMRQVSHKHIVLLYGVCVRDVE----------------NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQ 113 (262)
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEecCCC----------------CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHH
Confidence 34555577888899999998877553322 25799999999999999876557999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCc-------EEEeccccchhccccccCCCCcchhhhhhcccchhhhccccch
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQ-------VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIA 410 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~-------vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~ 410 (874)
|+.||+|||++||+||||||+|||++.++. ++++|||++.....
T Consensus 114 i~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~----------------------------- 164 (262)
T cd05077 114 LASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS----------------------------- 164 (262)
T ss_pred HHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccC-----------------------------
Confidence 999999999999999999999999987664 89999997652210
Q ss_pred hhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccc
Q 002843 411 SAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVS 490 (874)
Q Consensus 411 ~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t 490 (874)
..
T Consensus 165 ------------------------------------------------------------------------------~~ 166 (262)
T cd05077 165 ------------------------------------------------------------------------------RQ 166 (262)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 01
Q ss_pred cccccccccCccccc-CCCCCCccchhHHHHHHHHhc-CCCCchHHHHHH-HHHhhcCCCCCCCCCCCHHHHHHHHHccc
Q 002843 491 EQLEEKWYASPEELS-GGVCTTSSNIYSLGVLFFELF-GRFDSERALAAA-MSDLRDRILPPSFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 491 ~~~GT~~Y~APEvl~-g~~ys~kSDIwSLGVIL~ELl-tG~~p~~~~~~~-~~~l~~~~lpp~~~~~~p~l~dLi~~cL~ 567 (874)
...++..|+|||.+. +..++.++|||||||++|||+ +|..|+...... ...+..... .......+.+.+||.+||+
T Consensus 167 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~ 245 (262)
T cd05077 167 ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQC-MLVTPSCKELADLMTHCMN 245 (262)
T ss_pred cccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCc-cCCCCChHHHHHHHHHHcC
Confidence 234667899999987 456899999999999999998 577776432211 111111111 1112234668899999999
Q ss_pred cCCCCCCChhHHhhh
Q 002843 568 PEPLSRPTTREILQS 582 (874)
Q Consensus 568 ~dP~~RPTa~EiL~h 582 (874)
.||.+||++.+||++
T Consensus 246 ~dp~~Rp~~~~il~~ 260 (262)
T cd05077 246 YDPNQRPFFRAIMRD 260 (262)
T ss_pred CChhhCcCHHHHHHh
Confidence 999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=265.57 Aligned_cols=209 Identities=20% Similarity=0.215 Sum_probs=162.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~Q 337 (874)
...+..+++...|++++.+......+... .+++||||+|++|.+++... +..+++.+++.++.|
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~---------------~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~ 110 (257)
T cd08223 46 AEQEAQLLSQLKHPNIVAYRESWEGEDGL---------------LYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQ 110 (257)
T ss_pred HHHHHHHHHhCCCCCeeeeeeeecCCCCE---------------EEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 33444566777788888766543211110 25799999999999999763 336999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||+.||+||||||+||+++.++.++|+|||+++......
T Consensus 111 l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~---------------------------------- 156 (257)
T cd08223 111 IAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC---------------------------------- 156 (257)
T ss_pred HHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC----------------------------------
Confidence 9999999999999999999999999999999999999876322000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......+++.
T Consensus 157 ---------------------------------------------------------------------~~~~~~~~~~~ 167 (257)
T cd08223 157 ---------------------------------------------------------------------DMASTLIGTPY 167 (257)
T ss_pred ---------------------------------------------------------------------CccccccCCcC
Confidence 00023457789
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
|+|||++.+..++.++|||||||++|+|++|..||.. .......+....+++......+.+.+|+.+||.++|.+||+
T Consensus 168 y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 247 (257)
T cd08223 168 YMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPS 247 (257)
T ss_pred ccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCC
Confidence 9999999988899999999999999999999888743 22223333344444333445578999999999999999999
Q ss_pred hhHHhhhHHH
Q 002843 576 TREILQSEVT 585 (874)
Q Consensus 576 a~EiL~hp~~ 585 (874)
+.++++||||
T Consensus 248 ~~~~l~~~~~ 257 (257)
T cd08223 248 VKSILRQPYI 257 (257)
T ss_pred HHHHhcCCCC
Confidence 9999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=267.05 Aligned_cols=208 Identities=16% Similarity=0.159 Sum_probs=162.3
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+...+....||+++.+......+.. .+++|||++|++|.+++...+ .+++..++.++.||+.
T Consensus 53 ~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~ 115 (263)
T cd06625 53 CEIQLLKNLQHERIVQYYGCLRDDET----------------LSIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILE 115 (263)
T ss_pred HHHHHHHhCCCCCeeeeEEEEccCCe----------------EEEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHH
Confidence 34456777889999888777654432 256999999999999998765 6999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||.|||+.||+||||||+||+++.++.++|+|||+++.......
T Consensus 116 ~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~------------------------------------ 159 (263)
T cd06625 116 GVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS------------------------------------ 159 (263)
T ss_pred HHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc------------------------------------
Confidence 99999999999999999999999999999999998763320000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
. ........|+..|+|
T Consensus 160 ---------------------~-------------------------------------------~~~~~~~~~~~~y~a 175 (263)
T cd06625 160 ---------------------S-------------------------------------------GTGMKSVTGTPYWMS 175 (263)
T ss_pred ---------------------c-------------------------------------------cccccCCCcCccccC
Confidence 0 000012356789999
Q ss_pred cccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHH--HHHhhcCCCCCCC-CCCCHHHHHHHHHccccCCCCCCChh
Q 002843 501 PEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAA--MSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPLSRPTTR 577 (874)
Q Consensus 501 PEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~--~~~l~~~~lpp~~-~~~~p~l~dLi~~cL~~dP~~RPTa~ 577 (874)
||++.+..++.++|||||||++|||++|..||...... ..........+.+ ......+.+|+.+||..+|.+|||+.
T Consensus 176 PE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 255 (263)
T cd06625 176 PEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAE 255 (263)
T ss_pred cceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHH
Confidence 99999988999999999999999999999998542221 1222222222222 23456789999999999999999999
Q ss_pred HHhhhHHH
Q 002843 578 EILQSEVT 585 (874)
Q Consensus 578 EiL~hp~~ 585 (874)
++|+|+||
T Consensus 256 ~ll~~~~~ 263 (263)
T cd06625 256 ELLRHFFV 263 (263)
T ss_pred HHhhCCCC
Confidence 99999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=270.52 Aligned_cols=213 Identities=17% Similarity=0.127 Sum_probs=164.5
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC--CCCCCHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR--GHKGKRIECLYI 334 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~--~~~lse~e~~~I 334 (874)
.....+...+....|++++.+......++. .+++||||+|++|.+++... ...+++..++.+
T Consensus 44 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 107 (286)
T cd06622 44 NQIIMELDILHKAVSPYIVDFYGAFFIEGA----------------VYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRI 107 (286)
T ss_pred HHHHHHHHHHHhcCCCcHHhhhhheecCCe----------------EEEEEeecCCCCHHHHHHhccccCCCCHHHHHHH
Confidence 344556667777889999888876554333 24699999999999999764 226999999999
Q ss_pred HHHHHHHHHHHHH-CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 335 FRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 335 ~~QIl~aL~yLHs-~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
+.||+.||.|||+ .||+||||||+||+++.++.+|++|||+++.....
T Consensus 108 ~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~------------------------------- 156 (286)
T cd06622 108 TYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS------------------------------- 156 (286)
T ss_pred HHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-------------------------------
Confidence 9999999999997 59999999999999999999999999987632200
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
......
T Consensus 157 --------------------------------------------------------------------------~~~~~~ 162 (286)
T cd06622 157 --------------------------------------------------------------------------LAKTNI 162 (286)
T ss_pred --------------------------------------------------------------------------ccccCC
Confidence 001234
Q ss_pred ccccccCcccccCC------CCCCccchhHHHHHHHHhcCCCCchHHH-----HHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 002843 494 EEKWYASPEELSGG------VCTTSSNIYSLGVLFFELFGRFDSERAL-----AAAMSDLRDRILPPSFLSENPKEAGFC 562 (874)
Q Consensus 494 GT~~Y~APEvl~g~------~ys~kSDIwSLGVIL~ELltG~~p~~~~-----~~~~~~l~~~~lpp~~~~~~p~l~dLi 562 (874)
|++.|+|||.+.+. .++.++|||||||++|+|++|..||... ...+..+.....+.......+.+.+|+
T Consensus 163 ~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 242 (286)
T cd06622 163 GCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFV 242 (286)
T ss_pred CccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHH
Confidence 67789999998654 3588999999999999999999887321 111222333333333334567789999
Q ss_pred HHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 563 LWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 563 ~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.+||..+|++||++.++++||||...+.
T Consensus 243 ~~~l~~~p~~Rp~~~~l~~~~~~~~~~~ 270 (286)
T cd06622 243 AKCLNKIPNRRPTYAQLLEHPWLVKYKN 270 (286)
T ss_pred HHHcccCcccCCCHHHHhcChhhhhccC
Confidence 9999999999999999999999987553
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=277.75 Aligned_cols=219 Identities=17% Similarity=0.220 Sum_probs=160.6
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~Q 337 (874)
...+..+++...||+++.+......+... +++||||++++|.+++... ...+++..++.|+.|
T Consensus 46 ~~~e~~~l~~l~hpniv~~~~~~~~~~~~----------------~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~q 109 (327)
T cd08227 46 LQGELHVSKLFNHPNIVPYRATFIADNEL----------------WVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQG 109 (327)
T ss_pred HHHHHHHHHhcCCCCeeeEEEEEEECCEE----------------EEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHH
Confidence 33455677778999999988776654432 5699999999999999753 235999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.++++||+........ +..
T Consensus 110 i~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~-----------------------~~~--------- 157 (327)
T cd08227 110 VLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINH-----------------------GQR--------- 157 (327)
T ss_pred HHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccc-----------------------ccc---------
Confidence 999999999999999999999999999999999999865422100 000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
... ..++ + ....++..
T Consensus 158 --------------------~~~--------------------------~~~~-----~-------------~~~~~~~~ 173 (327)
T cd08227 158 --------------------LRV--------------------------VHDF-----P-------------KYSVKVLP 173 (327)
T ss_pred --------------------ccc--------------------------cccc-----c-------------ccccceec
Confidence 000 0000 0 12345678
Q ss_pred ccCcccccC--CCCCCccchhHHHHHHHHhcCCCCchHHHHH---HHHHhhcCC--------CC----------------
Q 002843 498 YASPEELSG--GVCTTSSNIYSLGVLFFELFGRFDSERALAA---AMSDLRDRI--------LP---------------- 548 (874)
Q Consensus 498 Y~APEvl~g--~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~---~~~~l~~~~--------lp---------------- 548 (874)
|+|||++.+ ..|+.++|||||||++|||++|..||..... ....+.... .+
T Consensus 174 y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T cd08227 174 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSG 253 (327)
T ss_pred ccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCC
Confidence 999999976 3589999999999999999999999843211 111111000 00
Q ss_pred --------------------CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 549 --------------------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 549 --------------------p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+......+.+.+|+.+||++||++|||+.|+|+||||+.+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 254 LGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred CCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 00011235688999999999999999999999999998754
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=283.79 Aligned_cols=217 Identities=16% Similarity=0.153 Sum_probs=162.5
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
+...+..++....|++++.+.+......... ....+++|||+. ++|.+++.... .+++.+++.|+.|
T Consensus 45 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-----------~~~~~lv~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~q 111 (372)
T cd07853 45 RVFRELKMLCFFKHDNVLSALDILQPPHIDP-----------FEEIYVVTELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQ 111 (372)
T ss_pred HHHHHHHHHHhCCCCCcCCHhheecCCCccc-----------cceEEEEeeccc-cCHHHHHhcCC-CCCHHHHHHHHHH
Confidence 3455667788889999998877654322111 112368999997 68999987765 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 112 i~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~---------------------------------- 157 (372)
T cd07853 112 ILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE---------------------------------- 157 (372)
T ss_pred HHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCc----------------------------------
Confidence 9999999999999999999999999999999999999886322000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
....+..++|++
T Consensus 158 --------------------------------------------------------------------~~~~~~~~~~~~ 169 (372)
T cd07853 158 --------------------------------------------------------------------SKHMTQEVVTQY 169 (372)
T ss_pred --------------------------------------------------------------------cccCCCCCcCCC
Confidence 000123467889
Q ss_pred ccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH--HH-----------------------HHhhc-CCCCCC
Q 002843 498 YASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA--AM-----------------------SDLRD-RILPPS 550 (874)
Q Consensus 498 Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~-----------------------~~l~~-~~lpp~ 550 (874)
|+|||++.+. .++.++|||||||++|||++|..||..... .+ ..+.. ...++.
T Consensus 170 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (372)
T cd07853 170 YRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPS 249 (372)
T ss_pred cCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCc
Confidence 9999999875 479999999999999999999888732110 00 01111 111111
Q ss_pred -------CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 551 -------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 551 -------~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.....+.+.+||.+||++||.+|||+.|+|+||||.+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 250 LPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred hHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 122346788999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=267.29 Aligned_cols=206 Identities=12% Similarity=0.078 Sum_probs=158.9
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....||+++.+......+.. .+++|||++|++|.+++......+++.+++.++.|
T Consensus 52 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~ 115 (266)
T cd05064 52 GFLAEALTLGQFDHSNIVRLEGVITRGNT----------------MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPG 115 (266)
T ss_pred HHHHHHHHHhcCCCCCcCeEEEEEecCCC----------------cEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHH
Confidence 34556666777789999988766543222 25799999999999999875557999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+|++|||++......
T Consensus 116 i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~----------------------------------- 160 (266)
T cd05064 116 LASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE----------------------------------- 160 (266)
T ss_pred HHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccccc-----------------------------------
Confidence 999999999999999999999999999999999999976421100
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.. .......++..
T Consensus 161 ----------------------~~---------------------------------------------~~~~~~~~~~~ 173 (266)
T cd05064 161 ----------------------AI---------------------------------------------YTTMSGKSPVL 173 (266)
T ss_pred ----------------------ch---------------------------------------------hcccCCCCcee
Confidence 00 00012234568
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.+..++.++|||||||++|||++ |..||... ......+.+...++........+.+++..||.++|.+||
T Consensus 174 y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP 253 (266)
T cd05064 174 WAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERP 253 (266)
T ss_pred ecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCC
Confidence 999999998899999999999999999775 98887432 223344444444444444556789999999999999999
Q ss_pred ChhHHhh
Q 002843 575 TTREILQ 581 (874)
Q Consensus 575 Ta~EiL~ 581 (874)
++.+|++
T Consensus 254 ~~~~i~~ 260 (266)
T cd05064 254 RFSQIHS 260 (266)
T ss_pred CHHHHHH
Confidence 9999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=281.38 Aligned_cols=215 Identities=16% Similarity=0.176 Sum_probs=159.4
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+........... .....+++||||++ +|.+++.. .+++..+..++.
T Consensus 61 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~----------~~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~ 126 (355)
T cd07874 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKSLE----------EFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLY 126 (355)
T ss_pred HHHHHHHHHHHHhCCCchhceeeeeecccccc----------ccceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHH
Confidence 34455667788889999998877644222111 01124689999985 78887754 489999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 127 qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~---------------------------------- 172 (355)
T cd07874 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---------------------------------- 172 (355)
T ss_pred HHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc----------------------------------
Confidence 9999999999999999999999999999999999999998632200
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......||+
T Consensus 173 ----------------------------------------------------------------------~~~~~~~~t~ 182 (355)
T cd07874 173 ----------------------------------------------------------------------FMMTPYVVTR 182 (355)
T ss_pred ----------------------------------------------------------------------cccCCccccC
Confidence 0002346789
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH------HHHHHh-------------------hcC------
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA------AAMSDL-------------------RDR------ 545 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~------~~~~~l-------------------~~~------ 545 (874)
.|+|||++.+..++.++|||||||++|||++|..||.... ..+..+ ...
T Consensus 183 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (355)
T cd07874 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 262 (355)
T ss_pred CccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccc
Confidence 9999999999889999999999999999999988873211 000000 000
Q ss_pred CCCCCC------------CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 546 ILPPSF------------LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 546 ~lpp~~------------~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.++..+ ......+.+||.+||.+||++|||+.|+|+||||+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~ 318 (355)
T cd07874 263 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWY 318 (355)
T ss_pred cchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhccc
Confidence 000000 01124578999999999999999999999999998543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=269.15 Aligned_cols=210 Identities=16% Similarity=0.197 Sum_probs=165.6
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..+++...|++++........+.. .+++|||++|++|.+++... .+++..++.++.||
T Consensus 46 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql 107 (274)
T cd06609 46 IQQEIQFLSQCRSPYITKYYGSFLKGSK----------------LWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREV 107 (274)
T ss_pred HHHHHHHHHHcCCCCeeeeeEEEEECCe----------------EEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHH
Confidence 3445566777789998887766553322 25799999999999999875 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||+++|+||||+|+||+++.++.++++|||+++.+....
T Consensus 108 ~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~----------------------------------- 152 (274)
T cd06609 108 LLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM----------------------------------- 152 (274)
T ss_pred HHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc-----------------------------------
Confidence 999999999999999999999999999999999999987433000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......|++.|
T Consensus 153 --------------------------------------------------------------------~~~~~~~~~~~y 164 (274)
T cd06609 153 --------------------------------------------------------------------SKRNTFVGTPFW 164 (274)
T ss_pred --------------------------------------------------------------------cccccccCCccc
Confidence 000234577899
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCCCCC--CCHHHHHHHHHccccCCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPSFLS--ENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~~~~--~~p~l~dLi~~cL~~dP~~RP 574 (874)
+|||.+.+..++.++|||||||++|+|++|..||..... ....+... .++.... ..+.+.+++.+||..+|++||
T Consensus 165 ~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rp 243 (274)
T cd06609 165 MAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-NPPSLEGNKFSKPFKDFVSLCLNKDPKERP 243 (274)
T ss_pred cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-CCCCCcccccCHHHHHHHHHHhhCChhhCc
Confidence 999999988899999999999999999999999853221 12222222 2222222 456789999999999999999
Q ss_pred ChhHHhhhHHHHhhHh
Q 002843 575 TTREILQSEVTNEFQE 590 (874)
Q Consensus 575 Ta~EiL~hp~~~~~~~ 590 (874)
++.++++||||.....
T Consensus 244 t~~~il~~~~~~~~~~ 259 (274)
T cd06609 244 SAKELLKHKFIKKAKK 259 (274)
T ss_pred CHHHHhhChhhcCCCc
Confidence 9999999999986443
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=267.87 Aligned_cols=202 Identities=16% Similarity=0.116 Sum_probs=152.9
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+......+... +++||||++|+|.+++...+..+++..++.++.
T Consensus 44 ~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~ 107 (258)
T cd05078 44 ESFFEAASMMSQLSHKHLVLNYGVCVCGDES----------------IMVQEYVKFGSLDTYLKKNKNLINISWKLEVAK 107 (258)
T ss_pred HHHHHHHHHHHhCCCCChhheeeEEEeCCCc----------------EEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHH
Confidence 3445566778888899999888776643332 469999999999999987665799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCc--------EEEeccccchhccccccCCCCcchhhhhhcccchhhhcccc
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ--------VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTG 408 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~--------vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~ 408 (874)
||+.||+|||++||+||||||+|||++.++. ++++|||++....
T Consensus 108 qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~---------------------------- 159 (258)
T cd05078 108 QLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL---------------------------- 159 (258)
T ss_pred HHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccC----------------------------
Confidence 9999999999999999999999999988765 4777777653211
Q ss_pred chhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccc
Q 002843 409 IASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTS 488 (874)
Q Consensus 409 ~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~ 488 (874)
.
T Consensus 160 -------------------------------------------------------------------------------~ 160 (258)
T cd05078 160 -------------------------------------------------------------------------------P 160 (258)
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred cccccccccccCcccccCC-CCCCccchhHHHHHHHHhcCC-CCchHHHHHHH-HHhhcCCCCCCCCCCCHHHHHHHHHc
Q 002843 489 VSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR-FDSERALAAAM-SDLRDRILPPSFLSENPKEAGFCLWQ 565 (874)
Q Consensus 489 ~t~~~GT~~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG-~~p~~~~~~~~-~~l~~~~lpp~~~~~~p~l~dLi~~c 565 (874)
.....++..|+|||++.+. .++.++|||||||++|||++| ..|+....... ..+.... +......+..+.+|+.+|
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~ 239 (258)
T cd05078 161 KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDR-HQLPAPKWTELANLINQC 239 (258)
T ss_pred chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHcc-ccCCCCCcHHHHHHHHHH
Confidence 0123466789999999874 479999999999999999998 46654322211 1111111 111113447789999999
Q ss_pred cccCCCCCCChhHHhhh
Q 002843 566 LHPEPLSRPTTREILQS 582 (874)
Q Consensus 566 L~~dP~~RPTa~EiL~h 582 (874)
|+.+|++|||+.++++.
T Consensus 240 l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 240 MDYEPDFRPSFRAIIRD 256 (258)
T ss_pred hccChhhCCCHHHHHHh
Confidence 99999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=273.74 Aligned_cols=210 Identities=14% Similarity=0.128 Sum_probs=164.2
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~Q 337 (874)
...+..+++...||+++.+......+.. .+++||||+|++|.+++... ...+++.++..++.|
T Consensus 47 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~q 110 (285)
T cd05605 47 ALNEKQILEKVNSRFVVSLAYAYETKDA----------------LCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAE 110 (285)
T ss_pred HHHHHHHHHhcCCCCEeeeeeeecCCCe----------------EEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHH
Confidence 3446677788889988887666443322 36799999999999998654 236999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||+.||+||||||+||+++.++.++|+|||+++.+...
T Consensus 111 i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----------------------------------- 155 (285)
T cd05605 111 ITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG----------------------------------- 155 (285)
T ss_pred HHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC-----------------------------------
Confidence 999999999999999999999999999999999999987632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
......+|++.
T Consensus 156 ---------------------------------------------------------------------~~~~~~~~~~~ 166 (285)
T cd05605 156 ---------------------------------------------------------------------ETIRGRVGTVG 166 (285)
T ss_pred ---------------------------------------------------------------------CccccccCCCC
Confidence 00013467889
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH------HHHHhhcCCCCCCC-CCCCHHHHHHHHHccccCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA------AMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~------~~~~l~~~~lpp~~-~~~~p~l~dLi~~cL~~dP 570 (874)
|+|||++.+..++.++|||||||++|||++|..||..... ....+.. .++.+ ....+.+.+||.+||+.||
T Consensus 167 y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~P 244 (285)
T cd05605 167 YMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE--DQEEYSEKFSEAARSICRQLLTKDP 244 (285)
T ss_pred ccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh--cccccCcccCHHHHHHHHHHccCCH
Confidence 9999999988899999999999999999999999853221 1122221 11222 2345678999999999999
Q ss_pred CCCC-----ChhHHhhhHHHHhhHh
Q 002843 571 LSRP-----TTREILQSEVTNEFQE 590 (874)
Q Consensus 571 ~~RP-----Ta~EiL~hp~~~~~~~ 590 (874)
.+|| +++++++||||.....
T Consensus 245 ~~R~~~~~~~~~~l~~~~~~~~~~~ 269 (285)
T cd05605 245 GFRLGCRGEGAEEVKAHPFFRTANF 269 (285)
T ss_pred HHhcCCCCCCHHHHhcCcCccCCCH
Confidence 9999 8999999999987443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-30 Score=271.04 Aligned_cols=206 Identities=22% Similarity=0.264 Sum_probs=161.6
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+...+....||+++.+......+... +++||||++++|.++|.... .+++.+++.++.||+
T Consensus 46 ~~e~~~~~~l~~~~i~~~~~~~~~~~~~----------------~~v~~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~ 108 (260)
T PF00069_consen 46 IREIKILRRLRHPNIVQILDVFQDDNYL----------------YIVMEYCPGGSLQDYLQKNK-PLSEEEILKIAYQIL 108 (260)
T ss_dssp HHHHHHHHHHTBTTBCHEEEEEEESSEE----------------EEEEEEETTEBHHHHHHHHS-SBBHHHHHHHHHHHH
T ss_pred hhhhhccccccccccccccccccccccc----------------cccccccccccccccccccc-ccccccccccccccc
Confidence 3356677777899999888776643332 46999999999999998544 799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||++||++||+|+||||+||+++.++.++|+|||++......
T Consensus 109 ~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~------------------------------------- 151 (260)
T PF00069_consen 109 EALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSEN------------------------------------- 151 (260)
T ss_dssp HHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTST-------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc-------------------------------------
Confidence 9999999999999999999999999999999999987532100
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
........+++.|+
T Consensus 152 ------------------------------------------------------------------~~~~~~~~~~~~y~ 165 (260)
T PF00069_consen 152 ------------------------------------------------------------------NENFNPFVGTPEYM 165 (260)
T ss_dssp ------------------------------------------------------------------TSEBSSSSSSGGGS
T ss_pred ------------------------------------------------------------------cccccccccccccc
Confidence 00013456788999
Q ss_pred Cccccc-CCCCCCccchhHHHHHHHHhcCCCCchHHH-----HHHHHHhhcCCCCCCCC---CCCHHHHHHHHHccccCC
Q 002843 500 SPEELS-GGVCTTSSNIYSLGVLFFELFGRFDSERAL-----AAAMSDLRDRILPPSFL---SENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 500 APEvl~-g~~ys~kSDIwSLGVIL~ELltG~~p~~~~-----~~~~~~l~~~~lpp~~~---~~~p~l~dLi~~cL~~dP 570 (874)
|||++. +..++.++||||||+++|+|++|..|+... ...+.......++.... ...+.+.+++.+||+.||
T Consensus 166 aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 245 (260)
T PF00069_consen 166 APEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDP 245 (260)
T ss_dssp CHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSG
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCCh
Confidence 999998 778999999999999999999998887542 11222222211111111 112679999999999999
Q ss_pred CCCCChhHHhhhHHH
Q 002843 571 LSRPTTREILQSEVT 585 (874)
Q Consensus 571 ~~RPTa~EiL~hp~~ 585 (874)
++||++.++++||||
T Consensus 246 ~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 246 EQRPSAEELLKHPWF 260 (260)
T ss_dssp GGSTTHHHHHTSGGG
T ss_pred hHCcCHHHHhcCCCC
Confidence 999999999999997
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=273.53 Aligned_cols=215 Identities=15% Similarity=0.151 Sum_probs=164.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...+....|++++.+.+....++.. +++|||++|++|..++.+....+++..++.++.||
T Consensus 56 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql 119 (292)
T cd06644 56 YMVEIEILATCNHPYIVKLLGAFYWDGKL----------------WIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQM 119 (292)
T ss_pred HHHHHHHHHhCCCCcEeeeEEEEEeCCeE----------------EEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHH
Confidence 34455567778899988888776544432 56999999999999987655579999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+||+++.++.+||+|||++......
T Consensus 120 ~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~------------------------------------ 163 (292)
T cd06644 120 LEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT------------------------------------ 163 (292)
T ss_pred HHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc------------------------------------
Confidence 99999999999999999999999999999999999987532200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. .......+++.|
T Consensus 164 ----------------------~---------------------------------------------~~~~~~~~~~~y 176 (292)
T cd06644 164 ----------------------L---------------------------------------------QRRDSFIGTPYW 176 (292)
T ss_pred ----------------------c---------------------------------------------cccceecCCccc
Confidence 0 000133567899
Q ss_pred cCcccccC-----CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCC--CCCCCCHHHHHHHHHccccC
Q 002843 499 ASPEELSG-----GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPP--SFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 499 ~APEvl~g-----~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp--~~~~~~p~l~dLi~~cL~~d 569 (874)
+|||.+.+ ..++.++|||||||++|||++|..|+.... .....+.....+. ........+.+|+.+||..+
T Consensus 177 ~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 256 (292)
T cd06644 177 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKH 256 (292)
T ss_pred cCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCC
Confidence 99999853 447889999999999999999999875322 1222222222211 12233467899999999999
Q ss_pred CCCCCChhHHhhhHHHHhhHhhh
Q 002843 570 PLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 570 P~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
|++||++.++++||||..+....
T Consensus 257 p~~Rp~~~~il~~~~~~~~~~~~ 279 (292)
T cd06644 257 PETRPSAAQLLEHPFVSSVTSNR 279 (292)
T ss_pred cccCcCHHHHhcCccccccccch
Confidence 99999999999999998765443
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-29 Score=271.82 Aligned_cols=213 Identities=13% Similarity=0.088 Sum_probs=164.1
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....|++++.+.+....... .+++|||++|++|.+++... .+++.++..++.|
T Consensus 63 ~~~~e~~~l~~~~h~~v~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~q 124 (296)
T cd06654 63 LIINEILVMRENKNPNIVNYLDSYLVGDE----------------LWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRE 124 (296)
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEeCCE----------------EEEeecccCCCCHHHHHHhc--CCCHHHHHHHHHH
Confidence 34444556677789998888776543222 25799999999999999764 5899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 125 l~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~----------------------------------- 169 (296)
T cd06654 125 CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE----------------------------------- 169 (296)
T ss_pred HHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccc-----------------------------------
Confidence 999999999999999999999999999999999999987632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. .......|++.
T Consensus 170 ------------------------~--------------------------------------------~~~~~~~~~~~ 181 (296)
T cd06654 170 ------------------------Q--------------------------------------------SKRSTMVGTPY 181 (296)
T ss_pred ------------------------c--------------------------------------------cccCcccCCcc
Confidence 0 00023357789
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH---HHHHhhcCCCCC-CCCCCCHHHHHHHHHccccCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA---AMSDLRDRILPP-SFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~---~~~~l~~~~lpp-~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
|+|||.+.+..++.++|||||||++|+|++|..||..... ..........+. ......+.+.+|+.+||.++|++|
T Consensus 182 y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 261 (296)
T cd06654 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261 (296)
T ss_pred ccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccC
Confidence 9999999988899999999999999999999999843221 111122221111 122344678999999999999999
Q ss_pred CChhHHhhhHHHHhhHhh
Q 002843 574 PTTREILQSEVTNEFQEV 591 (874)
Q Consensus 574 PTa~EiL~hp~~~~~~~~ 591 (874)
|++.++++||||...+..
T Consensus 262 pt~~eil~~~~~~~~~~~ 279 (296)
T cd06654 262 GSAKELLQHQFLKIAKPL 279 (296)
T ss_pred cCHHHHhhChhhhccCCc
Confidence 999999999999865443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-29 Score=268.73 Aligned_cols=212 Identities=17% Similarity=0.177 Sum_probs=164.7
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....|++++.+.+....+... +++|||++|++|.+++...+..+++.+++.++.||
T Consensus 49 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql 112 (280)
T cd06611 49 FMVEIDILSECKHPNIVGLYEAYFYENKL----------------WILIEFCDGGALDSIMLELERGLTEPQIRYVCRQM 112 (280)
T ss_pred HHHHHHHHHhCCCCceeEEEEEEecCCeE----------------EEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 44555677778899999988876543332 56999999999999998765579999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 113 ~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~------------------------------------ 156 (280)
T cd06611 113 LEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST------------------------------------ 156 (280)
T ss_pred HHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc------------------------------------
Confidence 99999999999999999999999999999999999987532200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. .......|++.|
T Consensus 157 -----------------------~--------------------------------------------~~~~~~~~~~~y 169 (280)
T cd06611 157 -----------------------L--------------------------------------------QKRDTFIGTPYW 169 (280)
T ss_pred -----------------------c--------------------------------------------cccceeecchhh
Confidence 0 000234578899
Q ss_pred cCcccccC-----CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCC--CCCCCCHHHHHHHHHccccC
Q 002843 499 ASPEELSG-----GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPP--SFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 499 ~APEvl~g-----~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp--~~~~~~p~l~dLi~~cL~~d 569 (874)
+|||++.. ..++.++|||||||++|||++|..||.... ..+..+.....+. ........+.+|+.+||+.+
T Consensus 170 ~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 249 (280)
T cd06611 170 MAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKD 249 (280)
T ss_pred cCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccC
Confidence 99999853 457889999999999999999999985432 1222333222111 11123467889999999999
Q ss_pred CCCCCChhHHhhhHHHHhhH
Q 002843 570 PLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 570 P~~RPTa~EiL~hp~~~~~~ 589 (874)
|.+||++.++|+||||....
T Consensus 250 p~~Rps~~~il~~~~~~~~~ 269 (280)
T cd06611 250 PDDRPTAAELLKHPFVSDQS 269 (280)
T ss_pred hhhCcCHHHHhcChhhcccc
Confidence 99999999999999998653
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-29 Score=282.47 Aligned_cols=208 Identities=14% Similarity=0.113 Sum_probs=156.5
Q ss_pred HHHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-------------
Q 002843 258 LKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------------- 323 (874)
Q Consensus 258 ~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~------------- 323 (874)
....+..++... .||+++.+.......+. .+++||||+||+|.++|....
T Consensus 84 ~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~----------------~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~ 147 (375)
T cd05104 84 ALMSELKVLSYLGNHINIVNLLGACTVGGP----------------TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAE 147 (375)
T ss_pred HHHHHHHHHHHhcCCcceeeeeeeeccCCc----------------ceeeehhccCCcHHHHHHhcccccccccccchhh
Confidence 344455566655 79999998876543333 246999999999999996532
Q ss_pred -------------------------------------------------------------CCCCHHHHHHHHHHHHHHH
Q 002843 324 -------------------------------------------------------------HKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 324 -------------------------------------------------------------~~lse~e~~~I~~QIl~aL 342 (874)
..+++..++.|+.||+.||
T Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l 227 (375)
T cd05104 148 AALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGM 227 (375)
T ss_pred hHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence 1478889999999999999
Q ss_pred HHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 343 ~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 228 ~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-------------------------------------- 269 (375)
T cd05104 228 SFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN-------------------------------------- 269 (375)
T ss_pred HHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc--------------------------------------
Confidence 999999999999999999999999999999999874330000
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
. .......++..|+|||
T Consensus 270 ------------------~---------------------------------------------~~~~~~~~~~~y~aPE 286 (375)
T cd05104 270 ------------------Y---------------------------------------------VVKGNARLPVKWMAPE 286 (375)
T ss_pred ------------------c---------------------------------------------cccCCCCCCcceeChh
Confidence 0 0001223456799999
Q ss_pred cccCCCCCCccchhHHHHHHHHhcC-CCCchHHH---HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhH
Q 002843 503 ELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL---AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (874)
Q Consensus 503 vl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~---~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~E 578 (874)
++.+..++.++|||||||++|||++ |..||... ......+.....+.........+.+|+.+||++||++||++.|
T Consensus 287 ~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 366 (375)
T cd05104 287 SIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQ 366 (375)
T ss_pred HhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHH
Confidence 9999899999999999999999997 77777432 2223334433332222233567899999999999999999999
Q ss_pred Hhhh
Q 002843 579 ILQS 582 (874)
Q Consensus 579 iL~h 582 (874)
|++.
T Consensus 367 il~~ 370 (375)
T cd05104 367 IVQL 370 (375)
T ss_pred HHHH
Confidence 9865
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-29 Score=273.94 Aligned_cols=208 Identities=14% Similarity=0.033 Sum_probs=161.1
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+...+....||+++.++.....+ ..+++|||+.+|+|.+++......+++..++.++.
T Consensus 54 ~~~~~e~~~l~~l~h~niv~~~g~~~~~-----------------~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~ 116 (316)
T cd05108 54 KEILDEAYVMASVDNPHVCRLLGICLTS-----------------TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 116 (316)
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEcCC-----------------CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHH
Confidence 3455566778888999999887654321 12468999999999999988655799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 117 qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-------------------------------- 164 (316)
T cd05108 117 QIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK-------------------------------- 164 (316)
T ss_pred HHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCc--------------------------------
Confidence 999999999999999999999999999999999999999874330000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
. .......++.
T Consensus 165 ----------------------------~-----------------------------------------~~~~~~~~~~ 175 (316)
T cd05108 165 ----------------------------E-----------------------------------------YHAEGGKVPI 175 (316)
T ss_pred ----------------------------c-----------------------------------------eeccCCccce
Confidence 0 0001123356
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||++|||++ |..|+... ......+.....++........+.+++.+||..+|.+|
T Consensus 176 ~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 255 (316)
T cd05108 176 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSR 255 (316)
T ss_pred eecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 8999999998889999999999999999997 88887432 12223333333334344455778999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
|++.+++.+
T Consensus 256 ps~~~l~~~ 264 (316)
T cd05108 256 PKFRELIIE 264 (316)
T ss_pred cCHHHHHHH
Confidence 999999876
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-29 Score=267.01 Aligned_cols=204 Identities=17% Similarity=0.189 Sum_probs=157.2
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+..++....||+++.+......+.. .+++|||+++++|.+++...+ .+++.++..++.||+.
T Consensus 55 ~e~~~l~~~~h~~ii~~~~~~~~~~~----------------~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~ 117 (267)
T cd06646 55 QEIFMVKECKHCNIVAYFGSYLSREK----------------LWICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQ 117 (267)
T ss_pred HHHHHHHhcCCCCeeeeeEEEEeCCE----------------EEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHH
Confidence 34566777889999888776553332 246999999999999997765 7999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||+|||+.||+||||||+||+++.++.+||+|||+++.....
T Consensus 118 ~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~-------------------------------------- 159 (267)
T cd06646 118 GLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT-------------------------------------- 159 (267)
T ss_pred HHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc--------------------------------------
Confidence 999999999999999999999999999999999998633200
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
. .......|+..|+|
T Consensus 160 --------------------~---------------------------------------------~~~~~~~~~~~y~~ 174 (267)
T cd06646 160 --------------------I---------------------------------------------AKRKSFIGTPYWMA 174 (267)
T ss_pred --------------------c---------------------------------------------cccCccccCccccC
Confidence 0 00013357789999
Q ss_pred ccccc---CCCCCCccchhHHHHHHHHhcCCCCchHHHHHHH--HHhhc-CCCCCCC---CCCCHHHHHHHHHccccCCC
Q 002843 501 PEELS---GGVCTTSSNIYSLGVLFFELFGRFDSERALAAAM--SDLRD-RILPPSF---LSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 501 PEvl~---g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~--~~l~~-~~lpp~~---~~~~p~l~dLi~~cL~~dP~ 571 (874)
||.+. ...++.++|||||||++|||++|..|+....... ..+.. ...++.+ ......+.+|+.+||..+|+
T Consensus 175 PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 254 (267)
T cd06646 175 PEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPK 254 (267)
T ss_pred HhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChh
Confidence 99885 3447889999999999999999998875332211 11111 1122222 22346789999999999999
Q ss_pred CCCChhHHhhhHH
Q 002843 572 SRPTTREILQSEV 584 (874)
Q Consensus 572 ~RPTa~EiL~hp~ 584 (874)
+||++.+||+|+|
T Consensus 255 ~Rp~~~~il~~l~ 267 (267)
T cd06646 255 KRPTAERLLTHLF 267 (267)
T ss_pred hCcCHHHHhcCCC
Confidence 9999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=281.79 Aligned_cols=213 Identities=11% Similarity=0.058 Sum_probs=162.9
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..++....|++++.+......+.. .+++||||+||+|.+++.+....+++..+..|+.||+
T Consensus 49 ~~e~~~l~~~~~~~i~~l~~~~~~~~~----------------~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~ 112 (331)
T cd05624 49 REERNVLVNGDCQWITTLHYAFQDENY----------------LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMV 112 (331)
T ss_pred HHHHHHHHhCCCCCEeeEEEEEEcCCE----------------EEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 334456666778888877766553332 2569999999999999987544799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 113 ~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~----------------------------------- 157 (331)
T cd05624 113 LAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT----------------------------------- 157 (331)
T ss_pred HHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc-----------------------------------
Confidence 999999999999999999999999999999999999864320000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
......+||+.|+
T Consensus 158 -------------------------------------------------------------------~~~~~~~gt~~y~ 170 (331)
T cd05624 158 -------------------------------------------------------------------VQSSVAVGTPDYI 170 (331)
T ss_pred -------------------------------------------------------------------eeeccccCCcccC
Confidence 0002346899999
Q ss_pred CcccccC-----CCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc----CCCCCCCCCCCHHHHHHHHHcccc
Q 002843 500 SPEELSG-----GVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD----RILPPSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 500 APEvl~g-----~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~----~~lpp~~~~~~p~l~dLi~~cL~~ 568 (874)
|||++.+ +.++.++|||||||+||||++|..||... ......+.. ..+|+.+......+.+|+.+||..
T Consensus 171 aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~ 250 (331)
T cd05624 171 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICS 250 (331)
T ss_pred CHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccC
Confidence 9999876 46889999999999999999999998432 122333322 123444445567899999999987
Q ss_pred CCCC--CCChhHHhhhHHHHhhHh
Q 002843 569 EPLS--RPTTREILQSEVTNEFQE 590 (874)
Q Consensus 569 dP~~--RPTa~EiL~hp~~~~~~~ 590 (874)
.+.+ |+++.++++|+||..+.+
T Consensus 251 ~~~~~~~~~~~~~~~h~~f~~~~~ 274 (331)
T cd05624 251 RERRLGQNGIEDFKKHAFFEGIDW 274 (331)
T ss_pred chhhcCCCCHHHHhcCCCcCCCCH
Confidence 6654 478999999999986543
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-29 Score=266.39 Aligned_cols=210 Identities=19% Similarity=0.138 Sum_probs=159.1
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCC--CHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKG--KRIECLYI 334 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~l--se~e~~~I 334 (874)
.....+..++....|++++.+......+.. .+++|||++|++|.+++......+ ++..+..+
T Consensus 50 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 113 (268)
T cd06624 50 QPLHEEIALHSYLKHRNIVQYLGSDSENGF----------------FKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFY 113 (268)
T ss_pred HHHHHHHHHHHhcCCCCeeeeeeeeccCCE----------------EEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHH
Confidence 344556677778889999888776543322 256999999999999998754356 88999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEec-CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~-~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
+.||+.||+|||++||+||||||+||+++. .+.++|+|||++......
T Consensus 114 ~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~------------------------------- 162 (268)
T cd06624 114 TKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI------------------------------- 162 (268)
T ss_pred HHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC-------------------------------
Confidence 999999999999999999999999999976 678999999987532200
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
+ .......
T Consensus 163 ----------------------------~--------------------------------------------~~~~~~~ 170 (268)
T cd06624 163 ----------------------------N--------------------------------------------PCTETFT 170 (268)
T ss_pred ----------------------------C--------------------------------------------CccccCC
Confidence 0 0001234
Q ss_pred ccccccCcccccCCC--CCCccchhHHHHHHHHhcCCCCchHHHHH---HHHHhh-cCCCCCCCCCCCHHHHHHHHHccc
Q 002843 494 EEKWYASPEELSGGV--CTTSSNIYSLGVLFFELFGRFDSERALAA---AMSDLR-DRILPPSFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 494 GT~~Y~APEvl~g~~--ys~kSDIwSLGVIL~ELltG~~p~~~~~~---~~~~l~-~~~lpp~~~~~~p~l~dLi~~cL~ 567 (874)
|++.|+|||.+.+.. ++.++|||||||++|+|++|..|+..... .+.... ....+.......+.+.+|+.+||+
T Consensus 171 ~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 250 (268)
T cd06624 171 GTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFE 250 (268)
T ss_pred CCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcC
Confidence 678999999987644 78999999999999999999999854221 111111 111222222345678999999999
Q ss_pred cCCCCCCChhHHhhhHHH
Q 002843 568 PEPLSRPTTREILQSEVT 585 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~ 585 (874)
++|.+|||+.|++.||||
T Consensus 251 ~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 251 PDPDKRASAHDLLQDPFL 268 (268)
T ss_pred CCchhCCCHHHHHhCCCC
Confidence 999999999999999996
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-29 Score=268.80 Aligned_cols=203 Identities=19% Similarity=0.191 Sum_probs=159.4
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+...+....||+++.+.+....+... +++|||++|++|..+. .+++..+..++.||+
T Consensus 47 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~ 105 (279)
T cd06619 47 MSELEILYKCDSPYIIGFYGAFFVENRI----------------SICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVV 105 (279)
T ss_pred HHHHHHHHhCCCCCeeeEEEEEEECCEE----------------EEEEecCCCCChHHhh-----cCCHHHHHHHHHHHH
Confidence 3444566677899999988876644332 4699999999997652 578999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||+.||+|+||||+|||++.++.++|+|||++..+...
T Consensus 106 ~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~------------------------------------- 148 (279)
T cd06619 106 KGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS------------------------------------- 148 (279)
T ss_pred HHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-------------------------------------
Confidence 9999999999999999999999999999999999987632200
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.....+||..|+
T Consensus 149 --------------------------------------------------------------------~~~~~~~~~~y~ 160 (279)
T cd06619 149 --------------------------------------------------------------------IAKTYVGTNAYM 160 (279)
T ss_pred --------------------------------------------------------------------cccCCCCChhhc
Confidence 002346788999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH---------HHHHhhcCCCCCCC--CCCCHHHHHHHHHcccc
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA---------AMSDLRDRILPPSF--LSENPKEAGFCLWQLHP 568 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~---------~~~~l~~~~lpp~~--~~~~p~l~dLi~~cL~~ 568 (874)
|||++.+..++.++|||||||++|+|++|..||..... ....+... .++.. ....+.+.+|+.+||+.
T Consensus 161 aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~ 239 (279)
T cd06619 161 APERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE-DPPVLPVGQFSEKFVHFITQCMRK 239 (279)
T ss_pred CceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc-CCCCCCCCcCCHHHHHHHHHHhhC
Confidence 99999988899999999999999999999998853211 11111111 12221 23457789999999999
Q ss_pred CCCCCCChhHHhhhHHHHhhH
Q 002843 569 EPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+|.+||++.|+++||||....
T Consensus 240 ~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 240 QPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred ChhhCCCHHHHhcCccccccc
Confidence 999999999999999997653
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-29 Score=265.77 Aligned_cols=207 Identities=14% Similarity=0.073 Sum_probs=160.4
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-------------C
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-------------H 324 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-------------~ 324 (874)
....+..++....|++++.+......... .+++|||++|++|.++|...+ .
T Consensus 54 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 117 (280)
T cd05049 54 DFEREAELLTNFQHENIVKFYGVCTEGDP----------------PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMG 117 (280)
T ss_pred HHHHHHHHHHhcCCCCchheeeEEecCCC----------------eEEEEecCCCCCHHHHHHhcCCchhhhcccccccc
Confidence 34455567777889988887776554322 257999999999999997643 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhh
Q 002843 325 KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEM 404 (874)
Q Consensus 325 ~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~d 404 (874)
.+++.++..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.+.....
T Consensus 118 ~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~-------------------- 177 (280)
T cd05049 118 ELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDY-------------------- 177 (280)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcc--------------------
Confidence 578999999999999999999999999999999999999999999999998864320000
Q ss_pred ccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccc
Q 002843 405 FTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQ 484 (874)
Q Consensus 405 fg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~ 484 (874)
..
T Consensus 178 --------------------------------------------------------------------~~---------- 179 (280)
T cd05049 178 --------------------------------------------------------------------YR---------- 179 (280)
T ss_pred --------------------------------------------------------------------ee----------
Confidence 00
Q ss_pred cccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 002843 485 QSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGF 561 (874)
Q Consensus 485 ~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dL 561 (874)
......+++.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....++........+.+|
T Consensus 180 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 256 (280)
T cd05049 180 ---VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDI 256 (280)
T ss_pred ---cCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHH
Confidence 0012245678999999999899999999999999999998 9888732 222344444444444334456779999
Q ss_pred HHHccccCCCCCCChhHHhh
Q 002843 562 CLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 562 i~~cL~~dP~~RPTa~EiL~ 581 (874)
+.+||.+||.+||++.|+++
T Consensus 257 i~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 257 MLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHHcCCCcccCCCHHHHHH
Confidence 99999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-29 Score=269.28 Aligned_cols=206 Identities=16% Similarity=0.074 Sum_probs=159.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------------
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--------------- 323 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~--------------- 323 (874)
...+...+....|++++.+......... .+++|||++|++|.+++...+
T Consensus 54 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~ 117 (291)
T cd05094 54 FQREAELLTNLQHEHIVKFYGVCGDGDP----------------LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK 117 (291)
T ss_pred HHHHHHHHhcCCCCCcceEEEEEccCCc----------------eEEEEecCCCCcHHHHHHhcCcccccccccccccCc
Confidence 3345567777889999888776543322 257999999999999997542
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhh
Q 002843 324 HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEE 403 (874)
Q Consensus 324 ~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~ 403 (874)
..+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 118 ~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~------------------- 178 (291)
T cd05094 118 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY------------------- 178 (291)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCce-------------------
Confidence 2489999999999999999999999999999999999999999999999999864330000
Q ss_pred hccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccc
Q 002843 404 MFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQ 483 (874)
Q Consensus 404 dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~ 483 (874)
.
T Consensus 179 --------------------------------------~----------------------------------------- 179 (291)
T cd05094 179 --------------------------------------Y----------------------------------------- 179 (291)
T ss_pred --------------------------------------e-----------------------------------------
Confidence 0
Q ss_pred ccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHH
Q 002843 484 QQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAG 560 (874)
Q Consensus 484 ~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~d 560 (874)
.......++..|+|||.+.+..++.++|||||||++|||++ |..|+.. ....+..+.....+.........+.+
T Consensus 180 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (291)
T cd05094 180 ---RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYD 256 (291)
T ss_pred ---ecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHH
Confidence 00012346678999999998889999999999999999998 9888732 22233444444444433444567999
Q ss_pred HHHHccccCCCCCCChhHHhh
Q 002843 561 FCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 561 Li~~cL~~dP~~RPTa~EiL~ 581 (874)
|+.+||.++|++||++.++++
T Consensus 257 li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 257 IMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHHHHcccChhhCcCHHHHHH
Confidence 999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=265.63 Aligned_cols=212 Identities=16% Similarity=0.134 Sum_probs=159.9
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+........... .+++|||++|++|.+++...+ .+++...+.++.||
T Consensus 51 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--------------~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi 115 (266)
T cd06651 51 LECEIQLLKNLQHERIVQYYGCLRDRAEKT--------------LTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQI 115 (266)
T ss_pred HHHHHHHHHHcCCCCeeeEEEEEEcCCCCE--------------EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 334456777778999888776543221111 256999999999999998765 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||+++|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 116 ~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------- 161 (266)
T cd06651 116 LEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM---------------------------------- 161 (266)
T ss_pred HHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc----------------------------------
Confidence 9999999999999999999999999999999999999864320000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. ........++..|
T Consensus 162 -----------------------~-------------------------------------------~~~~~~~~~~~~y 175 (266)
T cd06651 162 -----------------------S-------------------------------------------GTGIRSVTGTPYW 175 (266)
T ss_pred -----------------------c-------------------------------------------CCccccCCccccc
Confidence 0 0000123567899
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHH--HHHhhcCCCCCCCCC-CCHHHHHHHHHccccCCCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAA--MSDLRDRILPPSFLS-ENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~--~~~l~~~~lpp~~~~-~~p~l~dLi~~cL~~dP~~RPT 575 (874)
+|||.+.+..++.++|||||||++|||++|..||...... ...+......+.+.. ..+.+.+|+ .||..+|++||+
T Consensus 176 ~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~ 254 (266)
T cd06651 176 MSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPS 254 (266)
T ss_pred cCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcC
Confidence 9999999888999999999999999999999998543221 222222222333332 345677777 688899999999
Q ss_pred hhHHhhhHHHH
Q 002843 576 TREILQSEVTN 586 (874)
Q Consensus 576 a~EiL~hp~~~ 586 (874)
+.||++||||+
T Consensus 255 ~~eil~hp~~~ 265 (266)
T cd06651 255 AEELLRHPFAQ 265 (266)
T ss_pred HHHHhcCcccc
Confidence 99999999986
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=269.30 Aligned_cols=212 Identities=16% Similarity=0.190 Sum_probs=163.6
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQI 338 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QI 338 (874)
..+..++....|++++........+.. .+++|||++|++|.+++...+ ..+++..+..++.||
T Consensus 48 ~~E~~il~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql 111 (285)
T cd05632 48 LNEKQILEKVNSQFVVNLAYAYETKDA----------------LCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEI 111 (285)
T ss_pred HHHHHHHHHcCCcCceeEEEEEecCCE----------------EEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 445567777888888876655443332 257999999999999986532 369999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||+.||+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~------------------------------------ 155 (285)
T cd05632 112 LCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG------------------------------------ 155 (285)
T ss_pred HHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC------------------------------------
Confidence 99999999999999999999999999999999999987532100
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......|+..|
T Consensus 156 --------------------------------------------------------------------~~~~~~~g~~~~ 167 (285)
T cd05632 156 --------------------------------------------------------------------ESIRGRVGTVGY 167 (285)
T ss_pred --------------------------------------------------------------------CcccCCCCCcCc
Confidence 000234678999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCC--CCCC-CCCCHHHHHHHHHccccCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRIL--PPSF-LSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~l--pp~~-~~~~p~l~dLi~~cL~~dP~~R 573 (874)
+|||.+.+..++.++|||||||++|||++|..||..... ....+..... ...+ ....+.+.+|+.+||..||++|
T Consensus 168 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 247 (285)
T cd05632 168 MAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQR 247 (285)
T ss_pred cChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHc
Confidence 999999988899999999999999999999999853221 1112221111 1112 2344678899999999999999
Q ss_pred CC-----hhHHhhhHHHHhhHhh
Q 002843 574 PT-----TREILQSEVTNEFQEV 591 (874)
Q Consensus 574 PT-----a~EiL~hp~~~~~~~~ 591 (874)
|+ +.+++.|+||+.....
T Consensus 248 ~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05632 248 LGCQEEGAGEVKRHPFFRNMNFK 270 (285)
T ss_pred CCCcccChHHHHcChhhhcCCHH
Confidence 99 8899999999987543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=272.25 Aligned_cols=211 Identities=18% Similarity=0.197 Sum_probs=163.9
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...+....|++++.+......... .+++|||++|++|.+++... .+++.+++.++.||
T Consensus 66 ~~~e~~~l~~l~h~~ii~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi 127 (292)
T cd06658 66 LFNEVVIMRDYHHENVVDMYNSYLVGDE----------------LWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSV 127 (292)
T ss_pred HHHHHHHHHhCCCCcHHHHHHheecCCe----------------EEEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHH
Confidence 4445566777789988887776442222 36799999999999998654 58999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 128 ~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------------------------------------ 171 (292)
T cd06658 128 LRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE------------------------------------ 171 (292)
T ss_pred HHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc------------------------------------
Confidence 99999999999999999999999999999999999987632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. .......|+..|
T Consensus 172 ----------------------~---------------------------------------------~~~~~~~~~~~y 184 (292)
T cd06658 172 ----------------------V---------------------------------------------PKRKSLVGTPYW 184 (292)
T ss_pred ----------------------c---------------------------------------------ccCceeecCccc
Confidence 0 000234678899
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCCCC---CCCCHHHHHHHHHccccCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPPSF---LSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp~~---~~~~p~l~dLi~~cL~~dP~~R 573 (874)
+|||.+.+..++.++|||||||++|||++|..|+.... ..+..+... +++.. ......+.+|+.+||..+|.+|
T Consensus 185 ~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 263 (292)
T cd06658 185 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN-LPPRVKDSHKVSSVLRGFLDLMLVREPSQR 263 (292)
T ss_pred cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCccccccccCHHHHHHHHHHccCChhHC
Confidence 99999988889999999999999999999998874321 122223222 22221 2345678899999999999999
Q ss_pred CChhHHhhhHHHHhhHhh
Q 002843 574 PTTREILQSEVTNEFQEV 591 (874)
Q Consensus 574 PTa~EiL~hp~~~~~~~~ 591 (874)
||+.++|+||||......
T Consensus 264 pt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 264 ATAQELLQHPFLKLAGPP 281 (292)
T ss_pred cCHHHHhhChhhhccCCc
Confidence 999999999999965543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=263.51 Aligned_cols=209 Identities=15% Similarity=0.124 Sum_probs=162.0
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...++...|++++.+......+.. .+++|||+.|++|.+++...+..+++..++.++.|
T Consensus 44 ~~~~e~~~~~~l~~~~i~~~~~~~~~~~~----------------~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~ 107 (256)
T cd06612 44 EIIKEISILKQCDSPYIVKYYGSYFKNTD----------------LWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQ 107 (256)
T ss_pred HHHHHHHHHHhCCCCcEeeeeeeeecCCc----------------EEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHH
Confidence 34445556677789998888776553322 25799999999999999876668999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 108 l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~---------------------------------- 153 (256)
T cd06612 108 TLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM---------------------------------- 153 (256)
T ss_pred HHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCc----------------------------------
Confidence 9999999999999999999999999999999999999876432000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......|+..
T Consensus 154 ---------------------------------------------------------------------~~~~~~~~~~~ 164 (256)
T cd06612 154 ---------------------------------------------------------------------AKRNTVIGTPF 164 (256)
T ss_pred ---------------------------------------------------------------------cccccccCCcc
Confidence 00012346778
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcC-CCCCCCC---CCCHHHHHHHHHccccCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDR-ILPPSFL---SENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~-~lpp~~~---~~~p~l~dLi~~cL~~dP~~R 573 (874)
|+|||.+.+..++.++|||||||++|+|++|..|+............. ..++.+. .....+.+|+.+||..+|++|
T Consensus 165 y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R 244 (256)
T cd06612 165 WMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEER 244 (256)
T ss_pred ccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhC
Confidence 999999998889999999999999999999999985432211111111 1111111 233578999999999999999
Q ss_pred CChhHHhhhHHH
Q 002843 574 PTTREILQSEVT 585 (874)
Q Consensus 574 PTa~EiL~hp~~ 585 (874)
||+.|+|.||||
T Consensus 245 ps~~~il~~~~~ 256 (256)
T cd06612 245 PSAIQLLQHPFI 256 (256)
T ss_pred cCHHHHhcCCCC
Confidence 999999999996
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=264.40 Aligned_cols=209 Identities=19% Similarity=0.173 Sum_probs=163.7
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......++. .+++|||++|++|.+++......+++..+..++.||
T Consensus 46 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l 109 (265)
T cd06605 46 ILRELDILHKCNSPYIVGFYGAFYNNGD----------------ISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAV 109 (265)
T ss_pred HHHHHHHHHHCCCCchhhhheeeecCCE----------------EEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHH
Confidence 3444456666779998887776554322 257999999999999998764489999999999999
Q ss_pred HHHHHHHHH-CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 339 VALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 339 l~aL~yLHs-~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
+.||+|||+ .||+|+||||+||+++.++.++|+|||++.......
T Consensus 110 ~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~---------------------------------- 155 (265)
T cd06605 110 LKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL---------------------------------- 155 (265)
T ss_pred HHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH----------------------------------
Confidence 999999999 999999999999999999999999999876332000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. ....++..
T Consensus 156 ---------------------------------------------------------------------~--~~~~~~~~ 164 (265)
T cd06605 156 ---------------------------------------------------------------------A--KTFVGTSS 164 (265)
T ss_pred ---------------------------------------------------------------------h--hcccCChh
Confidence 0 01356678
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH-------HHHHHHhhcCCCCCCCCC-CCHHHHHHHHHccccC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL-------AAAMSDLRDRILPPSFLS-ENPKEAGFCLWQLHPE 569 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~-------~~~~~~l~~~~lpp~~~~-~~p~l~dLi~~cL~~d 569 (874)
|+|||.+.+..++.++|||||||++|+|++|..|+... ...+..+.....+..... ..+.+.+||.+||..+
T Consensus 165 y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 244 (265)
T cd06605 165 YMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKD 244 (265)
T ss_pred ccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCC
Confidence 99999999988999999999999999999998887432 122222322222222222 4567899999999999
Q ss_pred CCCCCChhHHhhhHHHHhh
Q 002843 570 PLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 570 P~~RPTa~EiL~hp~~~~~ 588 (874)
|.+|||+.+++.||||+..
T Consensus 245 p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 245 PRERPSYKELLEHPFIKKY 263 (265)
T ss_pred chhCcCHHHHhhCchhhcc
Confidence 9999999999999999754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-29 Score=267.16 Aligned_cols=207 Identities=19% Similarity=0.180 Sum_probs=160.6
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------------
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--------------- 323 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~--------------- 323 (874)
...+..+++...||+++.+......... .+++|||+++++|.+++....
T Consensus 54 ~~~E~~~l~~l~h~niv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 117 (283)
T cd05090 54 FQQEASLMAELHHPNIVCLLGVVTQEQP----------------VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTV 117 (283)
T ss_pred HHHHHHHHhhCCCCCeeeEEEEEecCCc----------------eEEEEEcCCCCcHHHHHHhcCCCCcccccccccccc
Confidence 3445678888899999888776443322 257999999999999995321
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchh
Q 002843 324 -HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEE 402 (874)
Q Consensus 324 -~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei 402 (874)
..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+|++|||+++.......
T Consensus 118 ~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~------------------ 179 (283)
T cd05090 118 KSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADY------------------ 179 (283)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcc------------------
Confidence 2478999999999999999999999999999999999999999999999999874330000
Q ss_pred hhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccc
Q 002843 403 EMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTA 482 (874)
Q Consensus 403 ~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~ 482 (874)
.
T Consensus 180 ---------------------------------------~---------------------------------------- 180 (283)
T cd05090 180 ---------------------------------------Y---------------------------------------- 180 (283)
T ss_pred ---------------------------------------e----------------------------------------
Confidence 0
Q ss_pred cccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHH
Q 002843 483 QQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEA 559 (874)
Q Consensus 483 ~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~ 559 (874)
.......++..|+|||.+.+..++.++|||||||+||||++ |..||.. ....+..+.....++......+.+.
T Consensus 181 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (283)
T cd05090 181 ----RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMY 256 (283)
T ss_pred ----ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHH
Confidence 00012234568999999998889999999999999999998 8888743 2233445555444444445567899
Q ss_pred HHHHHccccCCCCCCChhHHhhh
Q 002843 560 GFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 560 dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+++.+||.++|.+||++.+|+++
T Consensus 257 ~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 257 SLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHHHHHcccCcccCcCHHHHHHH
Confidence 99999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-29 Score=269.84 Aligned_cols=214 Identities=14% Similarity=0.119 Sum_probs=165.4
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...++...||+++.+.+....... .+++|||++|++|.+++... .+++.++..++.|
T Consensus 62 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~ 123 (296)
T cd06655 62 LIINEILVMKELKNPNIVNFLDSFLVGDE----------------LFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRE 123 (296)
T ss_pred HHHHHHHHHHhcCCCceeeeeeeEecCce----------------EEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHH
Confidence 33445566777789988887766542221 35799999999999999765 5999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 124 l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~---------------------------------- 169 (296)
T cd06655 124 CLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ---------------------------------- 169 (296)
T ss_pred HHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc----------------------------------
Confidence 9999999999999999999999999999999999999876322000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......|+..
T Consensus 170 ---------------------------------------------------------------------~~~~~~~~~~~ 180 (296)
T cd06655 170 ---------------------------------------------------------------------SKRSTMVGTPY 180 (296)
T ss_pred ---------------------------------------------------------------------ccCCCcCCCcc
Confidence 00013357789
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCC--CCCCCCCHHHHHHHHHccccCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lp--p~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
|+|||.+.+..++.++|||||||++|+|++|..||..... .+..+.....+ .......+.+.+||.+||..+|.+|
T Consensus 181 y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 260 (296)
T cd06655 181 WMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKR 260 (296)
T ss_pred ccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhC
Confidence 9999999988899999999999999999999998843211 12222211111 1223345778999999999999999
Q ss_pred CChhHHhhhHHHHhhHhhh
Q 002843 574 PTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 574 PTa~EiL~hp~~~~~~~~~ 592 (874)
|++.+++.||||+....+.
T Consensus 261 pt~~~il~~~~~~~~~~~~ 279 (296)
T cd06655 261 GSAKELLQHPFLKLAKPLS 279 (296)
T ss_pred CCHHHHhhChHhhhccccc
Confidence 9999999999999766543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.3e-29 Score=275.16 Aligned_cols=206 Identities=17% Similarity=0.142 Sum_probs=154.8
Q ss_pred HHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC----------------
Q 002843 261 AGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------- 323 (874)
Q Consensus 261 ~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---------------- 323 (874)
.+..++... .|++++.++......+.. -+++|||++|++|.++|....
T Consensus 59 ~E~~~~~~l~~h~niv~~~~~~~~~~~~---------------~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~ 123 (337)
T cd05054 59 TELKILIHIGHHLNVVNLLGACTKPGGP---------------LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREM 123 (337)
T ss_pred HHHHHHHhhccCcchhheeeeEecCCCC---------------EEEEEecCCCCCHHHHHHhcccccccccccccccccc
Confidence 344444444 688888887754422221 246899999999999996421
Q ss_pred --------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCc
Q 002843 324 --------------------------------------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSS 359 (874)
Q Consensus 324 --------------------------------------------~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsN 359 (874)
..+++..+..++.||+.||+|||++||+||||||+|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~N 203 (337)
T cd05054 124 KQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARN 203 (337)
T ss_pred ccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcce
Confidence 157899999999999999999999999999999999
Q ss_pred eEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccc
Q 002843 360 FKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIE 439 (874)
Q Consensus 360 ILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~ 439 (874)
||++.++.+||+|||+++.+.....
T Consensus 204 ill~~~~~vkL~DfG~a~~~~~~~~------------------------------------------------------- 228 (337)
T cd05054 204 ILLSENNVVKICDFGLARDIYKDPD------------------------------------------------------- 228 (337)
T ss_pred EEEeCCCcEEEeccccchhcccCcc-------------------------------------------------------
Confidence 9999999999999999875430000
Q ss_pred cccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHH
Q 002843 440 TANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLG 519 (874)
Q Consensus 440 ~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLG 519 (874)
. .......++..|+|||++.+..++.++||||||
T Consensus 229 ~----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlG 262 (337)
T cd05054 229 Y----------------------------------------------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFG 262 (337)
T ss_pred h----------------------------------------------hhccCCCCCccccCcHHhcCCCCCccccHHHHH
Confidence 0 000223456689999999999999999999999
Q ss_pred HHHHHhcC-CCCchHH---HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 520 VLFFELFG-RFDSERA---LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 520 VIL~ELlt-G~~p~~~---~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
|+||||++ |..||.. .......+.....+.......+.+.+++.+||+.+|++||++.|+++|
T Consensus 263 v~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 263 VLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred HHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999997 8888743 122223333333322223445789999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=267.77 Aligned_cols=209 Identities=16% Similarity=0.103 Sum_probs=154.3
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL 342 (874)
.+.....|++++.+.......... ......+++||||.+++|.+++... +..+++..++.++.||+.||
T Consensus 65 ~l~~~~~h~~i~~~~~~~~~~~~~----------~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al 134 (282)
T cd06636 65 MLKKYSHHRNIATYYGAFIKKSPP----------GHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGL 134 (282)
T ss_pred HHHHhcCCCcEEEEeeehhccccc----------CCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHH
Confidence 344444688888776654311100 0011136899999999999999763 33689999999999999999
Q ss_pred HHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 343 ~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
+|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 135 ~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~---------------------------------------- 174 (282)
T cd06636 135 AHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT---------------------------------------- 174 (282)
T ss_pred HHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhcc----------------------------------------
Confidence 9999999999999999999999999999999987632200
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
. .......|++.|+|||
T Consensus 175 ------------------~---------------------------------------------~~~~~~~~~~~y~aPE 191 (282)
T cd06636 175 ------------------V---------------------------------------------GRRNTFIGTPYWMAPE 191 (282)
T ss_pred ------------------c---------------------------------------------cCCCcccccccccCHh
Confidence 0 0002346788999999
Q ss_pred ccc-----CCCCCCccchhHHHHHHHHhcCCCCchHHHHHH--HHHhhcCCCCC-CCCCCCHHHHHHHHHccccCCCCCC
Q 002843 503 ELS-----GGVCTTSSNIYSLGVLFFELFGRFDSERALAAA--MSDLRDRILPP-SFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 503 vl~-----g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~--~~~l~~~~lpp-~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
.+. +..++.++|||||||++|||++|..||...... ...+.....+. ......+.+.+||.+||..||.+||
T Consensus 192 ~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 271 (282)
T cd06636 192 VIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRP 271 (282)
T ss_pred hcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCc
Confidence 986 345889999999999999999999998543221 11111111111 1122346789999999999999999
Q ss_pred ChhHHhhhHHH
Q 002843 575 TTREILQSEVT 585 (874)
Q Consensus 575 Ta~EiL~hp~~ 585 (874)
++.|||+||||
T Consensus 272 ~~~ell~~~~~ 282 (282)
T cd06636 272 STEQLLKHPFI 282 (282)
T ss_pred CHHHHhcCCCC
Confidence 99999999996
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-29 Score=261.19 Aligned_cols=207 Identities=15% Similarity=0.141 Sum_probs=156.2
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.+......... .+++|||++|++|.+++...+..+++.+++.++.|
T Consensus 39 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~q 102 (252)
T cd05084 39 KFLQEARILKQYSHPNIVRLIGVCTQKQP----------------IYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVEN 102 (252)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEcCCCC----------------eEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHH
Confidence 34455567778889999888776442221 25799999999999999876557999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||++||+||||||+|||++.++.+|++|||+++.......
T Consensus 103 i~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--------------------------------- 149 (252)
T cd05084 103 AAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY--------------------------------- 149 (252)
T ss_pred HHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccc---------------------------------
Confidence 99999999999999999999999999999999999998763220000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.. .......+..
T Consensus 150 ----------------------~~----------------------------------------------~~~~~~~~~~ 161 (252)
T cd05084 150 ----------------------AS----------------------------------------------TGGMKQIPVK 161 (252)
T ss_pred ----------------------cc----------------------------------------------cCCCCCCcee
Confidence 00 0001112357
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.++.++.++|||||||++|||++ |..|+.... .....+.....++........+.+|+.+||.++|++||
T Consensus 162 y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 241 (252)
T cd05084 162 WTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRP 241 (252)
T ss_pred ecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCc
Confidence 999999998889999999999999999997 888774322 12223333222222223356789999999999999999
Q ss_pred ChhHHhh
Q 002843 575 TTREILQ 581 (874)
Q Consensus 575 Ta~EiL~ 581 (874)
|+.++++
T Consensus 242 s~~~~~~ 248 (252)
T cd05084 242 SFSTVHQ 248 (252)
T ss_pred CHHHHHH
Confidence 9999875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=270.06 Aligned_cols=206 Identities=16% Similarity=0.161 Sum_probs=155.6
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC--CCCCCHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR--GHKGKRIECLYIFRQ 337 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~--~~~lse~e~~~I~~Q 337 (874)
..+..++....||+++.+.+....+.. .+++|||++ ++|.+++... +..+++.+++.++.|
T Consensus 47 ~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~q 109 (285)
T cd07861 47 IREISLLKELQHPNIVCLQDVLMQESR----------------LYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQ 109 (285)
T ss_pred HHHHHHHHhcCCCCEeeeEEEEeeCCe----------------EEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 345566777779999988877553322 256999998 6999998653 247999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 110 i~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----------------------------------- 154 (285)
T cd07861 110 ILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP----------------------------------- 154 (285)
T ss_pred HHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC-----------------------------------
Confidence 999999999999999999999999999999999999987632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
........+++.
T Consensus 155 --------------------------------------------------------------------~~~~~~~~~~~~ 166 (285)
T cd07861 155 --------------------------------------------------------------------VRVYTHEVVTLW 166 (285)
T ss_pred --------------------------------------------------------------------cccccCCccccc
Confidence 000023356789
Q ss_pred ccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhc---------------------------CC
Q 002843 498 YASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRD---------------------------RI 546 (874)
Q Consensus 498 Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~---------------------------~~ 546 (874)
|+|||++.+. .++.++|||||||++|||++|.+||.... .....+.. ..
T Consensus 167 y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (285)
T cd07861 167 YRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGS 246 (285)
T ss_pred ccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcch
Confidence 9999998764 47899999999999999999998874211 11111000 00
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 547 LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 547 lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
+.......++++.+||.+||..||.+|||+.+|+.||||
T Consensus 247 ~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 247 LRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 001122345678899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-29 Score=266.56 Aligned_cols=211 Identities=16% Similarity=0.174 Sum_probs=164.0
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+.+....+.. .+++|||++|++|.+++... .+++..++.++.||
T Consensus 49 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~i 110 (277)
T cd06642 49 IQQEITVLSQCDSPYITRYYGSYLKGTK----------------LWIIMEYLGGGSALDLLKPG--PLEETYIATILREI 110 (277)
T ss_pred HHHHHHHHHcCCCCccHhhhcccccCCc----------------eEEEEEccCCCcHHHHhhcC--CCCHHHHHHHHHHH
Confidence 3445567777889988887776543322 35799999999999999754 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+|+||+|+||+++.++.++++|||+++.+....
T Consensus 111 ~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~----------------------------------- 155 (277)
T cd06642 111 LKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----------------------------------- 155 (277)
T ss_pred HHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc-----------------------------------
Confidence 999999999999999999999999999999999999876332000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......|+..|
T Consensus 156 --------------------------------------------------------------------~~~~~~~~~~~y 167 (277)
T cd06642 156 --------------------------------------------------------------------IKRNTFVGTPFW 167 (277)
T ss_pred --------------------------------------------------------------------hhhhcccCcccc
Confidence 000123567899
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHH--HHHhhcCCCCCCCC-CCCHHHHHHHHHccccCCCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAA--MSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~--~~~l~~~~lpp~~~-~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
+|||.+.+..++.++|||||||++|||++|..|+...... ...+. ...++.+. .....+.+|+.+||..+|.+||+
T Consensus 168 ~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 246 (277)
T cd06642 168 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP-KNSPPTLEGQYSKPFKEFVEACLNKDPRFRPT 246 (277)
T ss_pred cCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhh-cCCCCCCCcccCHHHHHHHHHHccCCcccCcC
Confidence 9999999888999999999999999999999987533211 11111 12223332 23456889999999999999999
Q ss_pred hhHHhhhHHHHhhHhh
Q 002843 576 TREILQSEVTNEFQEV 591 (874)
Q Consensus 576 a~EiL~hp~~~~~~~~ 591 (874)
+.++|+||||......
T Consensus 247 ~~~il~~~~~~~~~~~ 262 (277)
T cd06642 247 AKELLKHKFITRYTKK 262 (277)
T ss_pred HHHHHHhHHHHHHhhh
Confidence 9999999999875543
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-29 Score=261.81 Aligned_cols=211 Identities=19% Similarity=0.146 Sum_probs=164.8
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC---CCCCCHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYI 334 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~---~~~lse~e~~~I 334 (874)
+...+...+....|++++.+.......... ..+++|||+++++|.+++... ...+++.+++.+
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~--------------~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~ 110 (265)
T cd08217 45 QLVSEVNILRELKHPNIVRYYDRIIDRSNQ--------------TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRI 110 (265)
T ss_pred HHHHHHHHHHhcCCCccceeeeeeecCCCC--------------EEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHH
Confidence 344555677888899888877654321111 125799999999999999763 347999999999
Q ss_pred HHHHHHHHHHHH-----HCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccc
Q 002843 335 FRQIVALVDYHH-----TQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGI 409 (874)
Q Consensus 335 ~~QIl~aL~yLH-----s~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~ 409 (874)
+.||+.||+||| +.+|+|+||||+||+++.++.+|++|||+++......
T Consensus 111 ~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~-------------------------- 164 (265)
T cd08217 111 LTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS-------------------------- 164 (265)
T ss_pred HHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCc--------------------------
Confidence 999999999999 8999999999999999999999999999876432000
Q ss_pred hhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccc
Q 002843 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSV 489 (874)
Q Consensus 410 ~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~ 489 (874)
...
T Consensus 165 -----------------------------------------------------------------------------~~~ 167 (265)
T cd08217 165 -----------------------------------------------------------------------------SFA 167 (265)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred ccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccc
Q 002843 490 SEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 490 t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~ 567 (874)
....|++.|+|||.+.+..++.++|||||||++|+|++|..|+... ......+.....+.......+.+.+++.+||.
T Consensus 168 ~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 247 (265)
T cd08217 168 KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLN 247 (265)
T ss_pred cccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHcc
Confidence 2335788999999999888999999999999999999999887532 22233444444433333445778999999999
Q ss_pred cCCCCCCChhHHhhhHHH
Q 002843 568 PEPLSRPTTREILQSEVT 585 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~ 585 (874)
.+|.+||++.+||+|||+
T Consensus 248 ~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 248 VDPDKRPSTEELLQLPLI 265 (265)
T ss_pred CCcccCCCHHHHhhCCCC
Confidence 999999999999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-30 Score=299.74 Aligned_cols=267 Identities=20% Similarity=0.213 Sum_probs=187.1
Q ss_pred ccccCCCeeE---EEeccCCchhHHHHhhcCC-ceEEEecCCCCcccccccccccccccccCCChhHHHHHHHH-hHHhh
Q 002843 194 NMLSHGSIRT---KMLSKSGFSEFFVKTTLKG-KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGA-MMVAS 268 (874)
Q Consensus 194 ~~~~~~~~~~---~~~s~~~f~e~~~~~~~kg-kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~l~~~ 268 (874)
.++.-|+.+. |.|..+||+.-|+.+..+| +-++.|=.+.+ + ..+-+....|. ++-.-
T Consensus 30 ~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-----------------d-e~~L~~v~~EI~~MK~L 91 (738)
T KOG1989|consen 30 QTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-----------------D-EEALNAVKREIDIMKLL 91 (738)
T ss_pred eEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-----------------C-HHHHHHHHHHHHHHHHh
Confidence 3444444433 8999999998777777776 66666655321 0 01112222223 33334
Q ss_pred cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHH
Q 002843 269 NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHT 347 (874)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL~yLHs 347 (874)
..|+++|.++++...... .....+ .-+|.||||.||.|-+++.++ ...|++.+++.||+|+++||++||.
T Consensus 92 ~gh~nIV~yidss~~~~~------~~~~~~---EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~ 162 (738)
T KOG1989|consen 92 SGHKNIVSYIDSSAINRS------SNNGVW---EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY 162 (738)
T ss_pred cCCCceeeEecccccccc------CCCcee---EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 459999999995221110 001001 036899999999999999753 2269999999999999999999999
Q ss_pred CC--CcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccc
Q 002843 348 QG--VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSR 425 (874)
Q Consensus 348 ~g--IIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~ 425 (874)
+. |||||||-+||||+.+|+.||||||.+....-. .. ..
T Consensus 163 ~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~-------~~------~~-------------------------- 203 (738)
T KOG1989|consen 163 LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILS-------PT------SA-------------------------- 203 (738)
T ss_pred CCCccchhhhhhhheEEcCCCCEEeCcccccccccCC-------Cc------cH--------------------------
Confidence 97 999999999999999999999999987521100 00 00
Q ss_pred ccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccccc
Q 002843 426 WWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS 505 (874)
Q Consensus 426 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~ 505 (874)
++....+.. ....-|+.|+|||++.
T Consensus 204 ----------------------------~e~~~ve~e---------------------------I~k~TTp~YRsPEMID 228 (738)
T KOG1989|consen 204 ----------------------------QEVNYVEEE---------------------------IEKYTTPQYRSPEMID 228 (738)
T ss_pred ----------------------------HHHHHHHHH---------------------------HHhhCCccccChHHHh
Confidence 000000000 1335588999999875
Q ss_pred ---CCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 506 ---GGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 506 ---g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+.+.+.|+|||||||+||-|+....||+.... +..+...+-.|.+...+..+.+||..||++||.+||++.|++.+
T Consensus 229 lysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 229 LYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred hhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 56789999999999999999999999986521 33344445556666777889999999999999999999999765
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=281.01 Aligned_cols=207 Identities=14% Similarity=0.123 Sum_probs=155.4
Q ss_pred HHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--------------
Q 002843 259 KAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-------------- 323 (874)
Q Consensus 259 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-------------- 323 (874)
...+..++... .|++++.++......+.. +++||||.||+|.++|....
T Consensus 88 ~~~E~~il~~l~~h~nIv~~~~~~~~~~~~----------------~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~ 151 (374)
T cd05106 88 LMSELKILSHLGQHKNIVNLLGACTHGGPV----------------LVITEYCCYGDLLNFLRKKAETFLNFVMALPEIS 151 (374)
T ss_pred HHHHHHHHHhhccCCceeeEeeEecCCCCe----------------EEeHhhccCCcHHHHHHhhhhhhccccccccccc
Confidence 34455666665 799999988765533332 56999999999999996421
Q ss_pred -------------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHC
Q 002843 324 -------------------------------------------------------HKGKRIECLYIFRQIVALVDYHHTQ 348 (874)
Q Consensus 324 -------------------------------------------------------~~lse~e~~~I~~QIl~aL~yLHs~ 348 (874)
..+++.+++.|+.||+.||+|||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~ 231 (374)
T cd05106 152 ETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK 231 (374)
T ss_pred cccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence 1478889999999999999999999
Q ss_pred CCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccc
Q 002843 349 GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWS 428 (874)
Q Consensus 349 gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~ 428 (874)
||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 232 giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-------------------------------------------- 267 (374)
T cd05106 232 NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN-------------------------------------------- 267 (374)
T ss_pred CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc--------------------------------------------
Confidence 999999999999999999999999999864320000
Q ss_pred cCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCC
Q 002843 429 LFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV 508 (874)
Q Consensus 429 ~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ 508 (874)
. .......++..|+|||++.+..
T Consensus 268 ------------~---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~ 290 (374)
T cd05106 268 ------------Y---------------------------------------------VVKGNARLPVKWMAPESIFDCV 290 (374)
T ss_pred ------------e---------------------------------------------eeccCCCCccceeCHHHhcCCC
Confidence 0 0001223456799999999888
Q ss_pred CCCccchhHHHHHHHHhcC-CCCchHHHHH---HHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 509 CTTSSNIYSLGVLFFELFG-RFDSERALAA---AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 509 ys~kSDIwSLGVIL~ELlt-G~~p~~~~~~---~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
++.++|||||||++|||++ |..||..... ....+.....++......+.+.+++.+||+.||.+||++.++++.
T Consensus 291 ~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 291 YTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999997 9988854321 122222222222222235789999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=288.38 Aligned_cols=229 Identities=17% Similarity=0.102 Sum_probs=162.4
Q ss_pred cccccccccccCCChhHHHHHHHHhHHhhcCCC-----CCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCC
Q 002843 240 GMIDTKAFVTTTMPSDAALKAAGAMMVASNASP-----KPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVN 314 (874)
Q Consensus 240 ~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~Ggs 314 (874)
.++.+++.++-....-+...+....|-.-+.+. +.|..++... +...-|||.|... .+
T Consensus 211 ~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~----------------fr~HlciVfELL~-~N 273 (586)
T KOG0667|consen 211 GEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFY----------------FRNHLCIVFELLS-TN 273 (586)
T ss_pred CcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccc----------------cccceeeeehhhh-hh
Confidence 456666777766555555555554444333222 2233333333 3344677999997 89
Q ss_pred HHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC--CcEEEeccccchhccccccCCCCcch
Q 002843 315 LREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS--NQVKYIGPIIQKETLESASLDIPHSE 391 (874)
Q Consensus 315 L~~~L~~~~~-~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~--~~vKLiDFGlar~~~~~~~~~~~~~d 391 (874)
|.+||+.+.. .|+...++.|+.||+.||.+||+.||||+||||+||||... ..+||||||.+....
T Consensus 274 LYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~----------- 342 (586)
T KOG0667|consen 274 LYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES----------- 342 (586)
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccC-----------
Confidence 9999987542 69999999999999999999999999999999999999865 469999999875322
Q ss_pred hhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCC
Q 002843 392 NYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYS 471 (874)
Q Consensus 392 ~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg 471 (874)
T Consensus 343 -------------------------------------------------------------------------------- 342 (586)
T KOG0667|consen 343 -------------------------------------------------------------------------------- 342 (586)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH---HHH--HHHHhhc--
Q 002843 472 KSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA---LAA--AMSDLRD-- 544 (874)
Q Consensus 472 ~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~---~~~--~~~~l~~-- 544 (874)
....+.+.++.|+|||++.|.+|+.+.||||||||++||++|.+-|.. ... .+..+..
T Consensus 343 ---------------q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~P 407 (586)
T KOG0667|consen 343 ---------------QRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLP 407 (586)
T ss_pred ---------------CcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCC
Confidence 000255678899999999999999999999999999999999654411 111 0000000
Q ss_pred -------------------------------------------------CCCCCCC-------C-CCCHHHHHHHHHccc
Q 002843 545 -------------------------------------------------RILPPSF-------L-SENPKEAGFCLWQLH 567 (874)
Q Consensus 545 -------------------------------------------------~~lpp~~-------~-~~~p~l~dLi~~cL~ 567 (874)
...|+.. . .....+.+|+.+||.
T Consensus 408 p~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~ 487 (586)
T KOG0667|consen 408 PPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLE 487 (586)
T ss_pred CHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhc
Confidence 0011010 0 111346899999999
Q ss_pred cCCCCCCChhHHhhhHHHHhhHhh
Q 002843 568 PEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
+||..|+|+.|+|+||||......
T Consensus 488 ~dP~~R~tp~qal~Hpfl~~~~~~ 511 (586)
T KOG0667|consen 488 WDPAERITPAQALNHPFLTGTSLE 511 (586)
T ss_pred cCchhcCCHHHHhcCccccccccc
Confidence 999999999999999999965443
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-29 Score=271.08 Aligned_cols=244 Identities=14% Similarity=0.130 Sum_probs=169.8
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~Q 337 (874)
...+...+....|++++.+......+.. .+++|||+.|++|.+++... +..+++..+..++.|
T Consensus 48 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~q 111 (316)
T cd05574 48 VLTEQEILATLDHPFLPTLYASFQTETY----------------LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAE 111 (316)
T ss_pred HHHHHHHHHhCCCCCchhheeeeecCCE----------------EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHH
Confidence 3444456667778888888766543222 25799999999999999763 347999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||+.||+|+||||+||+++.++.++|+|||++........ ......
T Consensus 112 i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~-------------- 164 (316)
T cd05574 112 VLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP-------------PVSKAL-------------- 164 (316)
T ss_pred HHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccc-------------cccccc--------------
Confidence 99999999999999999999999999999999999999874331000 000000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
......+...... . ..............+||..
T Consensus 165 -----------~~~~~~~~~~~~~---------------~---------------------~~~~~~~~~~~~~~~g~~~ 197 (316)
T cd05574 165 -----------RKGSRRSSVNSIP---------------S---------------------ETFSEEPSFRSNSFVGTEE 197 (316)
T ss_pred -----------ccccccccccccc---------------h---------------------hhhcccccCCCCCCcCccC
Confidence 0000000000000 0 0000000011135678999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||++.+..++.++|||||||++|+|++|..||.... ..+..+.. ....+......+.+.+|+.+||+.+|++||
T Consensus 198 y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~ 277 (316)
T cd05574 198 YIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRL 277 (316)
T ss_pred CcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCC
Confidence 999999998889999999999999999999999984322 22222222 222223333567799999999999999999
Q ss_pred C----hhHHhhhHHHHhhHhhh
Q 002843 575 T----TREILQSEVTNEFQEVC 592 (874)
Q Consensus 575 T----a~EiL~hp~~~~~~~~~ 592 (874)
+ +.|+|+||||+......
T Consensus 278 s~~~~~~~ll~~~~~~~~~~~~ 299 (316)
T cd05574 278 GSKRGAAEIKQHPFFRGVNWAL 299 (316)
T ss_pred CchhhHHHHHcCchhhcCChhh
Confidence 9 99999999999876544
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=279.60 Aligned_cols=212 Identities=17% Similarity=0.110 Sum_probs=163.1
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
+.+....||++|.++...-....-. -++|.|||..|.+.. .-.....+++.+++.|++.++.||+
T Consensus 160 ailKkl~H~nVV~LiEvLDDP~s~~--------------~YlVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GLE 224 (576)
T KOG0585|consen 160 AILKKLHHPNVVKLIEVLDDPESDK--------------LYLVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGLE 224 (576)
T ss_pred HHHHhcCCcCeeEEEEeecCcccCc--------------eEEEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHHH
Confidence 5677788999998766532111111 267999999998753 3333323999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
|||.+|||||||||+|+||+.+|++||+|||.+......
T Consensus 225 YLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~----------------------------------------- 263 (576)
T KOG0585|consen 225 YLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQG----------------------------------------- 263 (576)
T ss_pred HHHhcCeeccccchhheEEcCCCcEEeeccceeeecccC-----------------------------------------
Confidence 999999999999999999999999999999987633200
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
.++ + ..-.+...+|||.|+|||.
T Consensus 264 -----------------~~~-----------~-----------------------------~d~~L~~tvGTPAF~APE~ 286 (576)
T KOG0585|consen 264 -----------------SDE-----------G-----------------------------SDDQLSRTVGTPAFFAPEL 286 (576)
T ss_pred -----------------Ccc-----------c-----------------------------cHHHHhhcCCCccccchHh
Confidence 000 0 0001134689999999999
Q ss_pred ccCCC----CCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCCCCh
Q 002843 504 LSGGV----CTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (874)
Q Consensus 504 l~g~~----ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa 576 (874)
+.++. .+.+.||||+||+||.|+.|.-||.+.. ....+|.+ ....|.....++.+.+||++||.+||++|++.
T Consensus 287 c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l 366 (576)
T KOG0585|consen 287 CSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITL 366 (576)
T ss_pred hcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeeh
Confidence 98843 3689999999999999999999985432 23444544 44456666778899999999999999999999
Q ss_pred hHHhhhHHHHhh
Q 002843 577 REILQSEVTNEF 588 (874)
Q Consensus 577 ~EiL~hp~~~~~ 588 (874)
.+|..|||...-
T Consensus 367 ~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 367 PDIKLHPWVTRD 378 (576)
T ss_pred hhheecceeccC
Confidence 999999999864
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=262.00 Aligned_cols=207 Identities=13% Similarity=0.061 Sum_probs=158.5
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..+++...|++++.+......+ ..+++|||++|++|.+++......+++..++.++.|
T Consensus 41 ~~~~E~~~l~~l~h~~ii~~~~~~~~~-----------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 103 (257)
T cd05115 41 EMMREAEIMHQLDNPYIVRMIGVCEAE-----------------ALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQ 103 (257)
T ss_pred HHHHHHHHHHhcCCCCeEEEEEEEcCC-----------------CeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHH
Confidence 344566778888999998887653211 125799999999999999865557999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 104 i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~--------------------------------- 150 (257)
T cd05115 104 VSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDS--------------------------------- 150 (257)
T ss_pred HHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCcc---------------------------------
Confidence 99999999999999999999999999999999999998863320000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. ....+...++..
T Consensus 151 -----------------------~--------------------------------------------~~~~~~~~~~~~ 163 (257)
T cd05115 151 -----------------------Y--------------------------------------------YKARSAGKWPLK 163 (257)
T ss_pred -----------------------c--------------------------------------------eeccCCCCCCcc
Confidence 0 000011223568
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.+..++.++|||||||++|||++ |..||... ......+.....++......+.+.+++.+||..+|++||
T Consensus 164 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp 243 (257)
T cd05115 164 WYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRP 243 (257)
T ss_pred cCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCc
Confidence 999999988889999999999999999996 98888432 223334444333333334567899999999999999999
Q ss_pred ChhHHhh
Q 002843 575 TTREILQ 581 (874)
Q Consensus 575 Ta~EiL~ 581 (874)
++.+|++
T Consensus 244 ~~~~i~~ 250 (257)
T cd05115 244 NFAKVEE 250 (257)
T ss_pred CHHHHHH
Confidence 9999864
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=266.12 Aligned_cols=213 Identities=16% Similarity=0.096 Sum_probs=162.3
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC------------CC
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------------HK 325 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~------------~~ 325 (874)
....+...+....||+++.+......++. .+++|||+++++|.++|...+ ..
T Consensus 53 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 116 (288)
T cd05093 53 DFHREAELLTNLQHEHIVKFYGVCVEGDP----------------LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAE 116 (288)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEecCCc----------------cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCC
Confidence 34455567777789999888776543322 257999999999999997543 14
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhc
Q 002843 326 GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMF 405 (874)
Q Consensus 326 lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~df 405 (874)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 117 l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~--------------------- 175 (288)
T cd05093 117 LTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY--------------------- 175 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCce---------------------
Confidence 89999999999999999999999999999999999999999999999999864320000
Q ss_pred cccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccc
Q 002843 406 TTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQ 485 (874)
Q Consensus 406 g~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~ 485 (874)
.
T Consensus 176 -----------------------------------~-------------------------------------------- 176 (288)
T cd05093 176 -----------------------------------Y-------------------------------------------- 176 (288)
T ss_pred -----------------------------------e--------------------------------------------
Confidence 0
Q ss_pred ccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 002843 486 STSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFC 562 (874)
Q Consensus 486 ~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi 562 (874)
.......++..|+|||.+.+..++.++|||||||++|||++ |..||.. .......+.....++......+.+.+|+
T Consensus 177 -~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li 255 (288)
T cd05093 177 -RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLM 255 (288)
T ss_pred -ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHH
Confidence 00012245678999999998889999999999999999998 8888743 2223344444444433344567899999
Q ss_pred HHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 563 LWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 563 ~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.+||+++|.+|||+.+++. .++.+.
T Consensus 256 ~~~l~~~p~~Rpt~~~v~~--~l~~~~ 280 (288)
T cd05093 256 LGCWQREPHMRLNIKEIHS--LLQNLA 280 (288)
T ss_pred HHHccCChhhCCCHHHHHH--HHHHHH
Confidence 9999999999999999843 344443
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-29 Score=270.64 Aligned_cols=206 Identities=13% Similarity=0.073 Sum_probs=153.1
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--------------
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-------------- 323 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-------------- 323 (874)
....+..++....||+++.++.....+.. .+++||||+|++|.++|....
T Consensus 65 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 128 (304)
T cd05096 65 DFLKEVKILSRLKDPNIIRLLGVCVDEDP----------------LCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPP 128 (304)
T ss_pred HHHHHHHHHhhcCCCCeeEEEEEEecCCc----------------eEEEEecCCCCcHHHHHHhcccccccccccccccc
Confidence 34556677888899999998876553332 257999999999999996532
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhccc
Q 002843 324 ----HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRS 399 (874)
Q Consensus 324 ----~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~ 399 (874)
..+++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 129 ~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~--------------- 193 (304)
T cd05096 129 AHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY--------------- 193 (304)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCce---------------
Confidence 1467889999999999999999999999999999999999999999999999864320000
Q ss_pred chhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccc
Q 002843 400 AEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVS 479 (874)
Q Consensus 400 ~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~ 479 (874)
T Consensus 194 -------------------------------------------------------------------------------- 193 (304)
T cd05096 194 -------------------------------------------------------------------------------- 193 (304)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC--CCCchHHH--HHHHHH----hhc---CCCC
Q 002843 480 NTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG--RFDSERAL--AAAMSD----LRD---RILP 548 (874)
Q Consensus 480 ~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt--G~~p~~~~--~~~~~~----l~~---~~lp 548 (874)
........++..|+|||++.++.++.++|||||||++|||++ +..|+... ...+.. +.. ...+
T Consensus 194 ------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (304)
T cd05096 194 ------YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYL 267 (304)
T ss_pred ------eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccc
Confidence 000012345678999999998889999999999999999986 44555321 111111 111 1111
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCChhHHh
Q 002843 549 PSFLSENPKEAGFCLWQLHPEPLSRPTTREIL 580 (874)
Q Consensus 549 p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL 580 (874)
.........+.+|+.+||..+|++|||+.+|.
T Consensus 268 ~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~ 299 (304)
T cd05096 268 FRPPPCPQGLYELMLQCWSRDCRERPSFSDIH 299 (304)
T ss_pred cCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence 12223446789999999999999999999994
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-29 Score=267.76 Aligned_cols=193 Identities=18% Similarity=0.127 Sum_probs=155.0
Q ss_pred CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002843 270 ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG 349 (874)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~g 349 (874)
.||+++.+......+... +++|||++|++|.+++.... .+++.+++.++.||+.||.|||+.|
T Consensus 67 ~h~~iv~~~~~~~~~~~~----------------~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~ 129 (267)
T PHA03390 67 DNPNFIKLYYSVTTLKGH----------------VLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHN 129 (267)
T ss_pred cCCCEEEEEEEEecCCee----------------EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 588888888776544432 56999999999999998876 7999999999999999999999999
Q ss_pred CcccCCCCCceEEecCC-cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccc
Q 002843 350 VTFLDLKPSSFKLLQSN-QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWS 428 (874)
Q Consensus 350 IIHRDLKPsNILL~~~~-~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~ 428 (874)
|+||||||+||+++.++ .++++|||+++.....
T Consensus 130 i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~---------------------------------------------- 163 (267)
T PHA03390 130 IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP---------------------------------------------- 163 (267)
T ss_pred eeeCCCCHHHEEEeCCCCeEEEecCccceecCCC----------------------------------------------
Confidence 99999999999999988 9999999987532200
Q ss_pred cCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCC
Q 002843 429 LFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV 508 (874)
Q Consensus 429 ~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ 508 (874)
....|+..|+|||++.+..
T Consensus 164 -------------------------------------------------------------~~~~~~~~y~aPE~~~~~~ 182 (267)
T PHA03390 164 -------------------------------------------------------------SCYDGTLDYFSPEKIKGHN 182 (267)
T ss_pred -------------------------------------------------------------ccCCCCCcccChhhhcCCC
Confidence 1224677899999999888
Q ss_pred CCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhc--CCCCCCCCCCCHHHHHHHHHccccCCCCCCC-hhHHhhh
Q 002843 509 CTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPT-TREILQS 582 (874)
Q Consensus 509 ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~--~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT-a~EiL~h 582 (874)
++.++|||||||++|||++|..||.... .....+.. ....+.....++.+.+||.+||+++|.+||+ +.|+|+|
T Consensus 183 ~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 183 YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred CCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 9999999999999999999998874211 01112211 1112223346688999999999999999996 5999999
Q ss_pred HHHH
Q 002843 583 EVTN 586 (874)
Q Consensus 583 p~~~ 586 (874)
|||.
T Consensus 263 ~~~~ 266 (267)
T PHA03390 263 PFLK 266 (267)
T ss_pred Cccc
Confidence 9986
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=264.91 Aligned_cols=201 Identities=12% Similarity=-0.005 Sum_probs=153.8
Q ss_pred HhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Q 002843 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL 342 (874)
...+....||+++.......... ..++|||+.+|+|.+++......+++..++.|+.||+.||
T Consensus 60 ~~~l~~l~h~~iv~~~~~~~~~~-----------------~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l 122 (279)
T cd05111 60 MLAMGSLDHAYIVRLLGICPGAS-----------------LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGM 122 (279)
T ss_pred HHHHhcCCCCCcceEEEEECCCc-----------------cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 34556778999888776432111 2468999999999999987655799999999999999999
Q ss_pred HHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 343 ~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
+|||++||+||||||+|||++.++.+|++|||+++.......
T Consensus 123 ~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------- 164 (279)
T cd05111 123 YYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK-------------------------------------- 164 (279)
T ss_pred HHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCc--------------------------------------
Confidence 999999999999999999999999999999999863320000
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
. ...+...++..|+|||
T Consensus 165 -------------------~--------------------------------------------~~~~~~~~~~~y~~pE 181 (279)
T cd05111 165 -------------------K--------------------------------------------YFYSEHKTPIKWMALE 181 (279)
T ss_pred -------------------c--------------------------------------------cccCCCCCcccccCHH
Confidence 0 0001234567899999
Q ss_pred cccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHH
Q 002843 503 ELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (874)
Q Consensus 503 vl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~Ei 579 (874)
.+.++.++.++|||||||++|||++ |..|+... ......+.....++........+.+++.+||..+|+.|||+.|+
T Consensus 182 ~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el 261 (279)
T cd05111 182 SILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKEL 261 (279)
T ss_pred HhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 9998889999999999999999998 88887432 11222233333333223344678899999999999999999998
Q ss_pred hh
Q 002843 580 LQ 581 (874)
Q Consensus 580 L~ 581 (874)
++
T Consensus 262 ~~ 263 (279)
T cd05111 262 AN 263 (279)
T ss_pred HH
Confidence 66
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=264.05 Aligned_cols=244 Identities=18% Similarity=0.150 Sum_probs=172.1
Q ss_pred CceEEEecCCCCcccccccccccccccccCCCh-hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCcccc
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (874)
|.|.||+|...+..........+++.++..... .......+..++....||+++.+..........
T Consensus 17 ~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~------------- 83 (283)
T cd05091 17 RFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL------------- 83 (283)
T ss_pred CCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce-------------
Confidence 578999996322211111122222222222111 122334455677778899999887765533332
Q ss_pred CCCceEeeccCCCCHHHHHHhC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC
Q 002843 301 IGGLRQGSSDHGVNLREWLNAR---------------GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (874)
Q Consensus 301 ~~~~lvMEy~~GgsL~~~L~~~---------------~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~ 365 (874)
+++|||+.+++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 84 ---~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 84 ---SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK 160 (283)
T ss_pred ---EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence 4689999999999999532 1258899999999999999999999999999999999999999
Q ss_pred CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccc
Q 002843 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (874)
Q Consensus 366 ~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~ 445 (874)
+.+||+|||+++.+..... .
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~--------------------------------------------------------~---- 180 (283)
T cd05091 161 LNVKISDLGLFREVYAADY--------------------------------------------------------Y---- 180 (283)
T ss_pred CceEecccccccccccchh--------------------------------------------------------e----
Confidence 9999999999874330000 0
Q ss_pred cccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHh
Q 002843 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (874)
Q Consensus 446 l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~EL 525 (874)
.......+++.|+|||.+.++.++.++|||||||++|||
T Consensus 181 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 219 (283)
T cd05091 181 -----------------------------------------KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEV 219 (283)
T ss_pred -----------------------------------------eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHH
Confidence 000123456789999999888899999999999999999
Q ss_pred cC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 526 FG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 526 lt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
++ |..|+.. .......+.....++........+.+|+..||+.+|.+||++.+|+..
T Consensus 220 ~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 220 FSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 98 7777632 222344444444433333445668999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=264.45 Aligned_cols=206 Identities=14% Similarity=0.022 Sum_probs=156.7
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....|++++.+....... ...++|||+++|+|.+++......+++.+++.++.|
T Consensus 55 ~~~~e~~~l~~~~~~~i~~~~~~~~~~-----------------~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~q 117 (279)
T cd05109 55 EILDEAYVMAGVGSPYVCRLLGICLTS-----------------TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQ 117 (279)
T ss_pred HHHHHHHHHHhcCCCCCceEEEEEcCC-----------------CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHH
Confidence 344555667777788887766543211 124699999999999999875547999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 118 i~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~--------------------------------- 164 (279)
T cd05109 118 IAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET--------------------------------- 164 (279)
T ss_pred HHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccc---------------------------------
Confidence 99999999999999999999999999999999999999874330000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. .......+++.
T Consensus 165 ------------------------~--------------------------------------------~~~~~~~~~~~ 176 (279)
T cd05109 165 ------------------------E--------------------------------------------YHADGGKVPIK 176 (279)
T ss_pred ------------------------e--------------------------------------------eecCCCccchh
Confidence 0 00011233568
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.+..++.++|||||||++|||++ |..|+... ......+.....++......+.+.+++.+||..||+.||
T Consensus 177 y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp 256 (279)
T cd05109 177 WMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRP 256 (279)
T ss_pred hCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCc
Confidence 999999998889999999999999999998 88887432 222233333333333444567789999999999999999
Q ss_pred ChhHHhh
Q 002843 575 TTREILQ 581 (874)
Q Consensus 575 Ta~EiL~ 581 (874)
++.+++.
T Consensus 257 ~~~~l~~ 263 (279)
T cd05109 257 RFRELVD 263 (279)
T ss_pred CHHHHHH
Confidence 9999984
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=261.03 Aligned_cols=212 Identities=24% Similarity=0.207 Sum_probs=167.1
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....|++++.+......+.. .+++|||++|++|.+++.... .+++..++.++.|
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~ 107 (264)
T cd06623 45 QLLRELKTLRSCESPYVVKCYGAFYKEGE----------------ISIVLEYMDGGSLADLLKKVG-KIPEPVLAYIARQ 107 (264)
T ss_pred HHHHHHHHHHhcCCCCeeeEEEEEccCCe----------------EEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHH
Confidence 34444455666679988888776553322 356999999999999998764 7999999999999
Q ss_pred HHHHHHHHHH-CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 338 IVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 338 Il~aL~yLHs-~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
|+.||+|||+ +|++||||+|+||+++.++.++|+|||+++......
T Consensus 108 l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~--------------------------------- 154 (264)
T cd06623 108 ILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL--------------------------------- 154 (264)
T ss_pred HHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC---------------------------------
Confidence 9999999999 999999999999999999999999999876332000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......++.
T Consensus 155 ----------------------------------------------------------------------~~~~~~~~~~ 164 (264)
T cd06623 155 ----------------------------------------------------------------------DQCNTFVGTV 164 (264)
T ss_pred ----------------------------------------------------------------------Ccccceeecc
Confidence 0001335678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH-----HHHHHhhcCCCCCCCCC-CCHHHHHHHHHccccCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA-----AAMSDLRDRILPPSFLS-ENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~-----~~~~~l~~~~lpp~~~~-~~p~l~dLi~~cL~~dP 570 (874)
.|+|||.+.+..++.++|||||||++|+|++|..|+.... .....+.....+..... ....+.+++.+||+++|
T Consensus 165 ~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 244 (264)
T cd06623 165 TYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDP 244 (264)
T ss_pred cccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCh
Confidence 9999999998889999999999999999999998875442 23334443333333333 45779999999999999
Q ss_pred CCCCChhHHhhhHHHHhhH
Q 002843 571 LSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 571 ~~RPTa~EiL~hp~~~~~~ 589 (874)
+.||++.++|+||||+...
T Consensus 245 ~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 245 KKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred hhCCCHHHHHhCHHHHhcc
Confidence 9999999999999998653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-29 Score=262.22 Aligned_cols=202 Identities=18% Similarity=0.182 Sum_probs=158.3
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
.+.....|++++.++.....+.. .+++||||+|++|.+++...+ .+++..+..++.||+.||.
T Consensus 49 ~~~~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~ 111 (260)
T cd05611 49 IMMIQGESPYVAKLYYSFQSKDY----------------LYLVMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVE 111 (260)
T ss_pred HHhhcCCCCCeeeeeeeEEcCCe----------------EEEEEeccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHH
Confidence 34445578888877766543322 256999999999999998765 7999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
|||+.||+||||+|+||+++.++.+||+|||+++....
T Consensus 112 ~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------------------------------------------ 149 (260)
T cd05611 112 DLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------------------------------------------ 149 (260)
T ss_pred HHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc------------------------------------------
Confidence 99999999999999999999999999999998752110
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
.....|+..|+|||.
T Consensus 150 -----------------------------------------------------------------~~~~~~~~~y~~pe~ 164 (260)
T cd05611 150 -----------------------------------------------------------------NKKFVGTPDYLAPET 164 (260)
T ss_pred -----------------------------------------------------------------cccCCCCcCccChhh
Confidence 012346678999999
Q ss_pred ccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCC--CCCCC-CCCCHHHHHHHHHccccCCCCCCCh--
Q 002843 504 LSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRI--LPPSF-LSENPKEAGFCLWQLHPEPLSRPTT-- 576 (874)
Q Consensus 504 l~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~--lpp~~-~~~~p~l~dLi~~cL~~dP~~RPTa-- 576 (874)
+.+..++.++|||||||++|||++|..|+... ......+.... .++.. ....+.+.+||.+||..+|++||++
T Consensus 165 ~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ 244 (260)
T cd05611 165 ILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANG 244 (260)
T ss_pred hcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCc
Confidence 99888999999999999999999999987432 11222222221 22222 2345778999999999999999965
Q ss_pred -hHHhhhHHHHhhH
Q 002843 577 -REILQSEVTNEFQ 589 (874)
Q Consensus 577 -~EiL~hp~~~~~~ 589 (874)
.|+|.||||..+.
T Consensus 245 ~~~~l~~~~~~~~~ 258 (260)
T cd05611 245 YQEIKSHPFFKSIN 258 (260)
T ss_pred HHHHHcChHhhcCC
Confidence 7999999998654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=265.31 Aligned_cols=209 Identities=15% Similarity=0.168 Sum_probs=163.3
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....|++++.+......+.. .+++|||++|++|.+++... .+++.++..++.||
T Consensus 49 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l 110 (277)
T cd06640 49 IQQEITVLSQCDSPYVTKYYGSYLKGTK----------------LWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEI 110 (277)
T ss_pred HHHHHHHHHhCCCCCEeeEEEEEEECCE----------------EEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHH
Confidence 3445566777889999888887664332 25799999999999999764 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||+.+++|+||+|+||+++.++.++++|||++......
T Consensus 111 ~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~------------------------------------ 154 (277)
T cd06640 111 LKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT------------------------------------ 154 (277)
T ss_pred HHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCC------------------------------------
Confidence 99999999999999999999999999999999999987632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. .......++..|
T Consensus 155 -----------------------~--------------------------------------------~~~~~~~~~~~y 167 (277)
T cd06640 155 -----------------------Q--------------------------------------------IKRNTFVGTPFW 167 (277)
T ss_pred -----------------------c--------------------------------------------cccccccCcccc
Confidence 0 000123567899
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCCCC-CCCHHHHHHHHHccccCCCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~~~-~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
+|||++.+..++.++|+|||||++|||++|..|+..... ....+. ...++... .....+.+|+.+||+.+|++||+
T Consensus 168 ~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 246 (277)
T cd06640 168 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP-KNNPPTLTGEFSKPFKEFIDACLNKDPSFRPT 246 (277)
T ss_pred cCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhh-cCCCCCCchhhhHHHHHHHHHHcccCcccCcC
Confidence 999999988899999999999999999999999853221 111121 22223222 33456889999999999999999
Q ss_pred hhHHhhhHHHHhhH
Q 002843 576 TREILQSEVTNEFQ 589 (874)
Q Consensus 576 a~EiL~hp~~~~~~ 589 (874)
+.++++|+||....
T Consensus 247 ~~~il~~~~~~~~~ 260 (277)
T cd06640 247 AKELLKHKFIVKNA 260 (277)
T ss_pred HHHHHhChHhhhcc
Confidence 99999999997544
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=268.72 Aligned_cols=205 Identities=16% Similarity=0.146 Sum_probs=153.7
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+..++....||+++.+.+....... .+++||||+ ++|.+++...+..+++..++.++.||+.
T Consensus 48 ~ei~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~ 110 (284)
T cd07839 48 REICLLKELKHKNIVRLYDVLHSDKK----------------LTLVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLK 110 (284)
T ss_pred HHHHHHHhcCCCCeeeHHHHhccCCc----------------eEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 34456677789998888776543322 257999998 5899998765557999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 111 al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~-------------------------------------- 152 (284)
T cd07839 111 GLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP-------------------------------------- 152 (284)
T ss_pred HHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC--------------------------------------
Confidence 999999999999999999999999999999999988632200
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
........+++.|+|
T Consensus 153 -----------------------------------------------------------------~~~~~~~~~~~~y~a 167 (284)
T cd07839 153 -----------------------------------------------------------------VRCYSAEVVTLWYRP 167 (284)
T ss_pred -----------------------------------------------------------------CCCcCCCccccCCcC
Confidence 000023356789999
Q ss_pred cccccCCC-CCCccchhHHHHHHHHhcCCCCchHH---HHHHHHHhh------------------cCCCCC---------
Q 002843 501 PEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERA---LAAAMSDLR------------------DRILPP--------- 549 (874)
Q Consensus 501 PEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~---~~~~~~~l~------------------~~~lpp--------- 549 (874)
||++.+.. ++.++|||||||++|||++|..|+.. ....+..+. .....+
T Consensus 168 PE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (284)
T cd07839 168 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLV 247 (284)
T ss_pred hHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhh
Confidence 99987754 78999999999999999998766411 111111110 000000
Q ss_pred -CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 550 -SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 550 -~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
.....++.+.+|+.+||+.||.+|||+.++|.||||
T Consensus 248 ~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 248 NVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred hhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 011234678899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-29 Score=302.16 Aligned_cols=213 Identities=15% Similarity=0.090 Sum_probs=163.3
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC---CCCCCHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLY 333 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~---~~~lse~e~~~ 333 (874)
.....+..++....||+++.++.......... .+++||||++++|.++|... ...+++..++.
T Consensus 57 ~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~--------------lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~ 122 (1021)
T PTZ00266 57 SQLVIEVNVMRELKHKNIVRYIDRFLNKANQK--------------LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVD 122 (1021)
T ss_pred HHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE--------------EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHH
Confidence 34555677888889999999987655333211 25799999999999999752 23699999999
Q ss_pred HHHHHHHHHHHHHHC-------CCcccCCCCCceEEecC-----------------CcEEEeccccchhccccccCCCCc
Q 002843 334 IFRQIVALVDYHHTQ-------GVTFLDLKPSSFKLLQS-----------------NQVKYIGPIIQKETLESASLDIPH 389 (874)
Q Consensus 334 I~~QIl~aL~yLHs~-------gIIHRDLKPsNILL~~~-----------------~~vKLiDFGlar~~~~~~~~~~~~ 389 (874)
|+.||+.||+|||+. +||||||||+||||+.. ..+||+|||+++.+...
T Consensus 123 Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~------- 195 (1021)
T PTZ00266 123 ITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIE------- 195 (1021)
T ss_pred HHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccc-------
Confidence 999999999999995 49999999999999642 34899999987632200
Q ss_pred chhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCC
Q 002843 390 SENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGN 469 (874)
Q Consensus 390 ~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~d 469 (874)
T Consensus 196 -------------------------------------------------------------------------------- 195 (1021)
T PTZ00266 196 -------------------------------------------------------------------------------- 195 (1021)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCcccccccccccccccccccccccCcccccC--CCCCCccchhHHHHHHHHhcCCCCchHH---HHHHHHHhhc
Q 002843 470 YSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGRFDSERA---LAAAMSDLRD 544 (874)
Q Consensus 470 fg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g--~~ys~kSDIwSLGVIL~ELltG~~p~~~---~~~~~~~l~~ 544 (874)
......+||+.|+|||++.+ ..++.++||||||||||||++|..||.. ....+..+..
T Consensus 196 -----------------s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~ 258 (1021)
T PTZ00266 196 -----------------SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKR 258 (1021)
T ss_pred -----------------ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhc
Confidence 00023468999999999865 3489999999999999999999999843 2223333333
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 545 RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 545 ~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
... .......+.+.+||..||.++|.+||++.|+|.|+||..+
T Consensus 259 ~p~-lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 259 GPD-LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred CCC-CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 221 1223446789999999999999999999999999999744
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=276.53 Aligned_cols=231 Identities=16% Similarity=0.162 Sum_probs=178.6
Q ss_pred cccccccccccccCC--ChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCH
Q 002843 238 RRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNL 315 (874)
Q Consensus 238 ~~~~~~~~~~~~~~~--~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL 315 (874)
|-++..++++|+... .+.....+-+..-|.-..|||+|.++...--.+.. +|+.|+-+||+|
T Consensus 41 FTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKl----------------yLiLELGD~GDl 104 (864)
T KOG4717|consen 41 FTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKL----------------YLILELGDGGDL 104 (864)
T ss_pred cccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceE----------------EEEEEecCCchH
Confidence 334444444544432 12234467777777788999999988775434443 469999999999
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEec-CCcEEEeccccchhccccccCCCCcchhhh
Q 002843 316 REWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYR 394 (874)
Q Consensus 316 ~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~-~~~vKLiDFGlar~~~~~~~~~~~~~d~~~ 394 (874)
++||.++...+++..+..||.||+.|+.|||...||||||||+|+++-+ -|-|||+|||++..+.
T Consensus 105 ~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~-------------- 170 (864)
T KOG4717|consen 105 FDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ-------------- 170 (864)
T ss_pred HHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC--------------
Confidence 9999887768999999999999999999999999999999999998765 4889999999865322
Q ss_pred hhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCC
Q 002843 395 LRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSS 474 (874)
Q Consensus 395 ~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~ 474 (874)
T Consensus 171 -------------------------------------------------------------------------------- 170 (864)
T KOG4717|consen 171 -------------------------------------------------------------------------------- 170 (864)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccccccccccccccccccccCcccccCCCCC-CccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc-CC-CCC
Q 002843 475 SPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCT-TSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD-RI-LPP 549 (874)
Q Consensus 475 ~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys-~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~-~~-lpp 549 (874)
+-..+++.+|+..|-|||++.|..|+ +++||||||||||-|+||.+||.+. .+.+..|.+ .+ +|.
T Consensus 171 ----------PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPs 240 (864)
T KOG4717|consen 171 ----------PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPS 240 (864)
T ss_pred ----------CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCch
Confidence 11223677999999999999999996 7999999999999999999999542 222333322 11 221
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 550 ~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
. .+.+..+||..||..||.+|.+.+||..++|++....-
T Consensus 241 h---vS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~ 279 (864)
T KOG4717|consen 241 H---VSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRG 279 (864)
T ss_pred h---hhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCC
Confidence 1 23567899999999999999999999999999976543
|
|
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=271.36 Aligned_cols=215 Identities=13% Similarity=0.084 Sum_probs=166.1
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..+++...|++++.+.+....+.. .+++|||++|++|.+++.+. .+++.++..++.|
T Consensus 62 ~~~~e~~~l~~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ 123 (297)
T cd06656 62 LIINEILVMRENKNPNIVNYLDSYLVGDE----------------LWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRE 123 (297)
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEecCCE----------------EEEeecccCCCCHHHHHHhC--CCCHHHHHHHHHH
Confidence 34445567778889998888776553332 25699999999999999765 5899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
++.||.|||+.||+||||||+|||++.++.++|+|||++.......
T Consensus 124 l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~---------------------------------- 169 (297)
T cd06656 124 CLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------------------------- 169 (297)
T ss_pred HHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc----------------------------------
Confidence 9999999999999999999999999999999999999876322000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......+++.
T Consensus 170 ---------------------------------------------------------------------~~~~~~~~~~~ 180 (297)
T cd06656 170 ---------------------------------------------------------------------SKRSTMVGTPY 180 (297)
T ss_pred ---------------------------------------------------------------------cCcCcccCCcc
Confidence 00023457789
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHH---HHHhhcCCCCC-CCCCCCHHHHHHHHHccccCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAA---MSDLRDRILPP-SFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~---~~~l~~~~lpp-~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
|+|||.+.+..++.++|||||||++|+|++|..||...... .........+. ......+.+.+|+.+||..+|++|
T Consensus 181 y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 260 (297)
T cd06656 181 WMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRR 260 (297)
T ss_pred ccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhC
Confidence 99999999888999999999999999999999998432211 11111111111 112334668899999999999999
Q ss_pred CChhHHhhhHHHHhhHhhhh
Q 002843 574 PTTREILQSEVTNEFQEVCA 593 (874)
Q Consensus 574 PTa~EiL~hp~~~~~~~~~~ 593 (874)
|++.++|+||||...+....
T Consensus 261 ps~~~il~~~~~~~~~~~~~ 280 (297)
T cd06656 261 GSAKELLQHPFLKLAKPLSS 280 (297)
T ss_pred cCHHHHhcCchhcccccccc
Confidence 99999999999997766553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=260.09 Aligned_cols=208 Identities=13% Similarity=0.107 Sum_probs=160.7
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....||+++.+......+.. .+++|||++|++|.+++......+++.+++.++.|
T Consensus 51 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 114 (266)
T cd05033 51 DFLTEASIMGQFDHPNIIRLEGVVTKSRP----------------VMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRG 114 (266)
T ss_pred HHHHHHHHHHhCCCCCcceEeEEEecCCc----------------eEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHH
Confidence 34556667778889998887776442222 25699999999999999875557999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.++++|||+++.......
T Consensus 115 l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------- 161 (266)
T cd05033 115 IASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA--------------------------------- 161 (266)
T ss_pred HHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc---------------------------------
Confidence 99999999999999999999999999999999999999874320000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. .......++..
T Consensus 162 -------------------------------------------------------------~-------~~~~~~~~~~~ 173 (266)
T cd05033 162 -------------------------------------------------------------T-------YTTKGGKIPIR 173 (266)
T ss_pred -------------------------------------------------------------c-------eeccCCCCCcc
Confidence 0 00001223568
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.+..++.++|||||||++|||++ |..|+.. .......+.....++......+.+.+|+.+||+.+|++||
T Consensus 174 y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 253 (266)
T cd05033 174 WTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERP 253 (266)
T ss_pred ccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCc
Confidence 999999998889999999999999999998 8888732 2223344444433333344567799999999999999999
Q ss_pred ChhHHhhh
Q 002843 575 TTREILQS 582 (874)
Q Consensus 575 Ta~EiL~h 582 (874)
++.|++++
T Consensus 254 ~~~ei~~~ 261 (266)
T cd05033 254 TFSQIVST 261 (266)
T ss_pred CHHHHHHH
Confidence 99999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=265.76 Aligned_cols=199 Identities=16% Similarity=0.128 Sum_probs=151.6
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.+......+... +++||||+|++|..++......+++..++.|+.|
T Consensus 62 ~~~~~~~~~~~l~h~niv~~~~~~~~~~~~----------------~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~q 125 (274)
T cd05076 62 AFFETASLMSQVSHIHLAFVHGVCVRGSEN----------------IMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQ 125 (274)
T ss_pred HHHHHHHHHhcCCCCCeeeEEEEEEeCCce----------------EEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHH
Confidence 345556788888999999988776544432 4699999999999999775557999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCC-------cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccch
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSN-------QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIA 410 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~-------~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~ 410 (874)
|+.||+|||++||+||||||+|||++..+ .+|++|||++.....
T Consensus 126 i~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~----------------------------- 176 (274)
T cd05076 126 LASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS----------------------------- 176 (274)
T ss_pred HHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccc-----------------------------
Confidence 99999999999999999999999998643 378999987642110
Q ss_pred hhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccc
Q 002843 411 SAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVS 490 (874)
Q Consensus 411 ~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t 490 (874)
..
T Consensus 177 ------------------------------------------------------------------------------~~ 178 (274)
T cd05076 177 ------------------------------------------------------------------------------RE 178 (274)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 01
Q ss_pred cccccccccCcccccC-CCCCCccchhHHHHHHHHhc-CCCCchHHHHHH--HHHhhc-CCCCCCCCCCCHHHHHHHHHc
Q 002843 491 EQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELF-GRFDSERALAAA--MSDLRD-RILPPSFLSENPKEAGFCLWQ 565 (874)
Q Consensus 491 ~~~GT~~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELl-tG~~p~~~~~~~--~~~l~~-~~lpp~~~~~~p~l~dLi~~c 565 (874)
...++..|+|||.+.+ ..++.++|||||||++|||+ +|..|+...... ...+.. ...++ ...+.+.+||.+|
T Consensus 179 ~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~c 255 (274)
T cd05076 179 ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKKHRLPE---PSCKELATLISQC 255 (274)
T ss_pred ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhccCCCC---CCChHHHHHHHHH
Confidence 2245667999998876 45899999999999999995 688887432211 111111 11221 2346789999999
Q ss_pred cccCCCCCCChhHHhhh
Q 002843 566 LHPEPLSRPTTREILQS 582 (874)
Q Consensus 566 L~~dP~~RPTa~EiL~h 582 (874)
|+.+|++||++.++|++
T Consensus 256 l~~~p~~Rps~~~il~~ 272 (274)
T cd05076 256 LTYEPTQRPSFRTILRD 272 (274)
T ss_pred cccChhhCcCHHHHHHh
Confidence 99999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=259.73 Aligned_cols=205 Identities=12% Similarity=0.015 Sum_probs=157.9
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......+ ..+++|||+++++|.+++.... .+++..+..++.||
T Consensus 43 ~~~e~~~l~~l~h~~i~~~~~~~~~~-----------------~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi 104 (257)
T cd05116 43 LLREANVMQQLDNPYIVRMIGICEAE-----------------SWMLVMELAELGPLNKFLQKNK-HVTEKNITELVHQV 104 (257)
T ss_pred HHHHHHHHHhCCCCCcceEEEEEcCC-----------------CcEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 34455677777899988876543211 1257999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||.|||++.++.+||+|||+++.+.....
T Consensus 105 ~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~---------------------------------- 150 (257)
T cd05116 105 SMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADEN---------------------------------- 150 (257)
T ss_pred HHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCC----------------------------------
Confidence 9999999999999999999999999999999999999874330000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.+ .......++..|
T Consensus 151 -----------------------------------------------------------~~-------~~~~~~~~~~~y 164 (257)
T cd05116 151 -----------------------------------------------------------YY-------KAKTHGKWPVKW 164 (257)
T ss_pred -----------------------------------------------------------ee-------eecCCCCCCccc
Confidence 00 000122345689
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
+|||.+....++.++|||||||++|||++ |..||.. .......+.....++......+.+.+||.+||.+||++||+
T Consensus 165 ~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~ 244 (257)
T cd05116 165 YAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPG 244 (257)
T ss_pred cCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcC
Confidence 99999988889999999999999999997 8888743 22234445544433333445688999999999999999999
Q ss_pred hhHHhh
Q 002843 576 TREILQ 581 (874)
Q Consensus 576 a~EiL~ 581 (874)
+.+|..
T Consensus 245 ~~~i~~ 250 (257)
T cd05116 245 FAVVEL 250 (257)
T ss_pred HHHHHH
Confidence 998854
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=259.81 Aligned_cols=209 Identities=19% Similarity=0.204 Sum_probs=167.0
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFR 336 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~ 336 (874)
....+...++...|++++.+......... .+++||||+|++|.+++... +..+++.++..++.
T Consensus 45 ~~~~e~~~l~~~~h~~i~~~~~~~~~~~~----------------~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 108 (256)
T cd08221 45 DALNEIVILSLLQHPNIIAYYNHFMDDNT----------------LLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLF 108 (256)
T ss_pred HHHHHHHHHHhCCCCCeeEEEeEEecCCe----------------EEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHH
Confidence 34556667788889999988887654332 25699999999999999765 44699999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
|++.||.|||+.||+|+||||+||+++.++.+||+|||+++......
T Consensus 109 ~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~--------------------------------- 155 (256)
T cd08221 109 QIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY--------------------------------- 155 (256)
T ss_pred HHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc---------------------------------
Confidence 99999999999999999999999999999999999999876322000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......|++
T Consensus 156 ----------------------------------------------------------------------~~~~~~~~~~ 165 (256)
T cd08221 156 ----------------------------------------------------------------------SMAETVVGTP 165 (256)
T ss_pred ----------------------------------------------------------------------ccccccCCCc
Confidence 0002345788
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
.|+|||.+.+..++.++|||||||++|||++|..|+.. .......+..+.+++........+.+|+.+||+++|.+||
T Consensus 166 ~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~ 245 (256)
T cd08221 166 YYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRP 245 (256)
T ss_pred cccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCC
Confidence 99999999988889999999999999999999888743 2223334444444444444567789999999999999999
Q ss_pred ChhHHhhhHHH
Q 002843 575 TTREILQSEVT 585 (874)
Q Consensus 575 Ta~EiL~hp~~ 585 (874)
++.++|+|+|+
T Consensus 246 s~~~ll~~~~l 256 (256)
T cd08221 246 TADEVLDQPLL 256 (256)
T ss_pred CHHHHhhCcCC
Confidence 99999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.2e-29 Score=278.04 Aligned_cols=235 Identities=22% Similarity=0.205 Sum_probs=168.9
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (874)
.|.||||...|+ ...+++...............+..++....|||.+.++.-....+. .
T Consensus 88 fg~VYkG~l~~~------~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~---------------~ 146 (361)
T KOG1187|consen 88 FGTVYKGVLSDG------TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGE---------------H 146 (361)
T ss_pred CeEEEEEEECCC------CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCc---------------e
Confidence 499999986654 1122222222222102236666677777778877766544332221 1
Q ss_pred CceEeeccCCCCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCCCceEEecCCcEEEeccccchh
Q 002843 303 GLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQG---VTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~-~lse~e~~~I~~QIl~aL~yLHs~g---IIHRDLKPsNILL~~~~~vKLiDFGlar~ 378 (874)
.+||+|||++|+|.++|..... .++|..++.|+.+++.||+|||... ||||||||+|||||++.++||+|||+|+.
T Consensus 147 ~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~ 226 (361)
T KOG1187|consen 147 RLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKL 226 (361)
T ss_pred EEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCccc
Confidence 4789999999999999987655 8999999999999999999999864 99999999999999999999999999963
Q ss_pred ccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCC
Q 002843 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (874)
Q Consensus 379 ~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~ 458 (874)
.... .
T Consensus 227 ~~~~-~-------------------------------------------------------------------------- 231 (361)
T KOG1187|consen 227 GPEG-D-------------------------------------------------------------------------- 231 (361)
T ss_pred CCcc-c--------------------------------------------------------------------------
Confidence 3200 0
Q ss_pred cccccccCcCCCCCCCCCcccccccccccccccc-cccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH---
Q 002843 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ-LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--- 534 (874)
Q Consensus 459 ~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~-~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--- 534 (874)
...... .||.+|+|||++..+..+.++|||||||+|+||+||+.+.+.
T Consensus 232 ----------------------------~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~ 283 (361)
T KOG1187|consen 232 ----------------------------TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRP 283 (361)
T ss_pred ----------------------------cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCC
Confidence 000122 789999999999988999999999999999999999865431
Q ss_pred ------HHHHHHHhhc----CCCCCCCC-CCC------HHHHHHHHHccccCCCCCCChhHHhh
Q 002843 535 ------LAAAMSDLRD----RILPPSFL-SEN------PKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 535 ------~~~~~~~l~~----~~lpp~~~-~~~------p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
..+....+.. .++.|.+. ... .++..+..+|++.+|..||+|.|++.
T Consensus 284 ~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 284 RGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred cccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 1111222222 33444443 222 23678999999999999999999743
|
|
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=261.43 Aligned_cols=211 Identities=16% Similarity=0.114 Sum_probs=158.7
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+...+....||+++.+........... .+++|||++|++|.+++.+.. .+++..++.++.||+
T Consensus 52 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~--------------~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~ 116 (265)
T cd06652 52 ECEIQLLKNLLHERIVQYYGCLRDPMERT--------------LSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQIL 116 (265)
T ss_pred HHHHHHHHhcCCCCeeeEEeEeccCCCce--------------EEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 34556677778998888766533211111 246999999999999998765 689999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||++||+|+||||+||+++.++.++|+|||+++......
T Consensus 117 ~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~------------------------------------ 160 (265)
T cd06652 117 EGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC------------------------------------ 160 (265)
T ss_pred HHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccccc------------------------------------
Confidence 99999999999999999999999999999999999876322000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.. . .......|+..|+
T Consensus 161 ---------------------~~------------------------------------~-------~~~~~~~~~~~y~ 176 (265)
T cd06652 161 ---------------------LS------------------------------------G-------TGMKSVTGTPYWM 176 (265)
T ss_pred ---------------------cc------------------------------------c-------cccccCCCCcccc
Confidence 00 0 0002335778999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHH--HHHhhcCCCCCCC-CCCCHHHHHHHHHccccCCCCCCCh
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAA--MSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPLSRPTT 576 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~--~~~l~~~~lpp~~-~~~~p~l~dLi~~cL~~dP~~RPTa 576 (874)
|||++.+..++.++|||||||++|||++|..||...... ...+......+.. ......+.+++.+||. +|+.||++
T Consensus 177 aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~ 255 (265)
T cd06652 177 SPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSA 255 (265)
T ss_pred ChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCH
Confidence 999998888999999999999999999999998543221 1222222212222 2334567899999995 99999999
Q ss_pred hHHhhhHHHH
Q 002843 577 REILQSEVTN 586 (874)
Q Consensus 577 ~EiL~hp~~~ 586 (874)
+|+++|||++
T Consensus 256 ~~il~~~~~~ 265 (265)
T cd06652 256 DELLRHTFVH 265 (265)
T ss_pred HHHhcCcccC
Confidence 9999999974
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=268.42 Aligned_cols=211 Identities=18% Similarity=0.167 Sum_probs=163.8
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....||+++.+......+.. .+++|||++|++|.+++... .+++..++.++.|
T Consensus 64 ~~~~e~~~l~~l~hp~i~~~~~~~~~~~~----------------~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~q 125 (297)
T cd06659 64 LLFNEVVIMRDYQHQNVVEMYKSYLVGEE----------------LWVLMEFLQGGALTDIVSQT--RLNEEQIATVCES 125 (297)
T ss_pred HHHHHHHHHHhCCCCchhhhhhheeeCCe----------------EEEEEecCCCCCHHHHHhhc--CCCHHHHHHHHHH
Confidence 34455566777789988877776543322 35699999999999988664 5899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 126 i~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~---------------------------------- 171 (297)
T cd06659 126 VLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---------------------------------- 171 (297)
T ss_pred HHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc----------------------------------
Confidence 9999999999999999999999999999999999999876322000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......|+..
T Consensus 172 ---------------------------------------------------------------------~~~~~~~~~~~ 182 (297)
T cd06659 172 ---------------------------------------------------------------------PKRKSLVGTPY 182 (297)
T ss_pred ---------------------------------------------------------------------ccccceecCcc
Confidence 00023467889
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCC--CCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRIL--PPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~l--pp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
|+|||++.+..++.++|||||||++|||++|..||... ...+..+..... ........+.+.+|+.+||..+|.+|
T Consensus 183 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~R 262 (297)
T cd06659 183 WMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQER 262 (297)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccC
Confidence 99999999888999999999999999999999987422 122233332211 11222345678999999999999999
Q ss_pred CChhHHhhhHHHHhhH
Q 002843 574 PTTREILQSEVTNEFQ 589 (874)
Q Consensus 574 PTa~EiL~hp~~~~~~ 589 (874)
|++.++++||||....
T Consensus 263 ps~~~ll~~~~~~~~~ 278 (297)
T cd06659 263 ATAQELLDHPFLLQTG 278 (297)
T ss_pred cCHHHHhhChhhccCC
Confidence 9999999999998543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-29 Score=266.43 Aligned_cols=206 Identities=17% Similarity=0.154 Sum_probs=157.5
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
.++....||+++........+.. .+++|||+.|++|.+++...+ .+++.+++.|+.|++.||.
T Consensus 49 ~~~~~~~~~~i~~~~~~~~~~~~----------------~~~v~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~ 111 (278)
T cd05606 49 SLVSTGDCPFIVCMSYAFHTPDK----------------LSFILDLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLE 111 (278)
T ss_pred HHHHhCCCCcEeeeeeeeecCCE----------------EEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Confidence 34445567777766555443222 257999999999999998765 7999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
|||+.+|+||||||+||+++.++.+|++|||+++.....
T Consensus 112 ~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~----------------------------------------- 150 (278)
T cd05606 112 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----------------------------------------- 150 (278)
T ss_pred HHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc-----------------------------------------
Confidence 999999999999999999999999999999987532200
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
......|+..|+|||.
T Consensus 151 ----------------------------------------------------------------~~~~~~~~~~y~aPE~ 166 (278)
T cd05606 151 ----------------------------------------------------------------KPHASVGTHGYMAPEV 166 (278)
T ss_pred ----------------------------------------------------------------CCcCcCCCcCCcCcHH
Confidence 0012357889999999
Q ss_pred ccCC-CCCCccchhHHHHHHHHhcCCCCchHHHH----HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC----
Q 002843 504 LSGG-VCTTSSNIYSLGVLFFELFGRFDSERALA----AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP---- 574 (874)
Q Consensus 504 l~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~----~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP---- 574 (874)
+.++ .++.++||||+||++|||++|..||.... ...........++.....++.+.+++.+||..+|.+||
T Consensus 167 ~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~ 246 (278)
T cd05606 167 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLG 246 (278)
T ss_pred hcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCC
Confidence 9754 58999999999999999999999985321 11111111111111122357899999999999999999
Q ss_pred -ChhHHhhhHHHHhhHhh
Q 002843 575 -TTREILQSEVTNEFQEV 591 (874)
Q Consensus 575 -Ta~EiL~hp~~~~~~~~ 591 (874)
++.++++||||+.....
T Consensus 247 ~~~~~ll~~~~~~~~~~~ 264 (278)
T cd05606 247 RGAQEVKEHPFFRSLDWQ 264 (278)
T ss_pred CCHHHHHhCccccCCCch
Confidence 99999999999876543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=259.11 Aligned_cols=209 Identities=17% Similarity=0.180 Sum_probs=161.4
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+......... .+++|||++|++|.+++......+++.+++.++.
T Consensus 45 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~----------------~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 108 (262)
T cd06613 45 EIIQQEISMLKECRHPNIVAYFGSYLRRDK----------------LWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCR 108 (262)
T ss_pred HHHHHHHHHHHhCCCCChhceEEEEEeCCE----------------EEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHH
Confidence 334445567778889999988776553332 2569999999999999987644799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 109 ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--------------------------------- 155 (262)
T cd06613 109 ETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--------------------------------- 155 (262)
T ss_pred HHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhh---------------------------------
Confidence 99999999999999999999999999999999999999876322000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......++.
T Consensus 156 ----------------------------------------------------------------------~~~~~~~~~~ 165 (262)
T cd06613 156 ----------------------------------------------------------------------AKRKSFIGTP 165 (262)
T ss_pred ----------------------------------------------------------------------hccccccCCc
Confidence 0002345778
Q ss_pred cccCcccccCC---CCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCC-CCC---CCCHHHHHHHHHccc
Q 002843 497 WYASPEELSGG---VCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPP-SFL---SENPKEAGFCLWQLH 567 (874)
Q Consensus 497 ~Y~APEvl~g~---~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp-~~~---~~~p~l~dLi~~cL~ 567 (874)
.|+|||.+.+. .++.++|||||||++|||++|..|+.... .....+....+++ ... .....+.+|+.+||.
T Consensus 166 ~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 245 (262)
T cd06613 166 YWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLT 245 (262)
T ss_pred cccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcC
Confidence 99999999876 78999999999999999999999874321 1122222222222 211 223568899999999
Q ss_pred cCCCCCCChhHHhhhHH
Q 002843 568 PEPLSRPTTREILQSEV 584 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~ 584 (874)
.+|..|||+.+++.|+|
T Consensus 246 ~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 246 KDPKKRPTATKLLQHPF 262 (262)
T ss_pred CChhhCCCHHHHhcCCC
Confidence 99999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=262.55 Aligned_cols=207 Identities=16% Similarity=0.107 Sum_probs=156.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------CCCCHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------HKGKRI 329 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---------~~lse~ 329 (874)
...+..++....||+++.+......++. .+++|||+++++|.+++.+.. ..+++.
T Consensus 56 ~~~e~~~l~~l~~~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 119 (277)
T cd05062 56 FLNEASVMKEFNCHHVVRLLGVVSQGQP----------------TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLK 119 (277)
T ss_pred HHHHHHHHHhCCCCCeeeEEEEEcCCCC----------------eEEEEecCCCCCHHHHHHHcCccccccccccCCCHH
Confidence 4455567778889998888765432222 257999999999999997532 135778
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccc
Q 002843 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGI 409 (874)
Q Consensus 330 e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~ 409 (874)
.++.++.||+.||+|||+.|++||||||+||+++.++.++++|||+++.......
T Consensus 120 ~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~------------------------- 174 (277)
T cd05062 120 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY------------------------- 174 (277)
T ss_pred HHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcce-------------------------
Confidence 8999999999999999999999999999999999999999999999864330000
Q ss_pred hhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccc
Q 002843 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSV 489 (874)
Q Consensus 410 ~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~ 489 (874)
. ...
T Consensus 175 -------------------------------~---------------------------------------------~~~ 178 (277)
T cd05062 175 -------------------------------Y---------------------------------------------RKG 178 (277)
T ss_pred -------------------------------e---------------------------------------------ecC
Confidence 0 000
Q ss_pred ccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHcc
Q 002843 490 SEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 490 t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL 566 (874)
....+++.|+|||++.+..++.++|||||||++|||++ |..|+... ......+.....++......+.+.+|+.+||
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 258 (277)
T cd05062 179 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCW 258 (277)
T ss_pred CCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence 12245678999999998889999999999999999998 67776321 2223333333333333344567899999999
Q ss_pred ccCCCCCCChhHHhhh
Q 002843 567 HPEPLSRPTTREILQS 582 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~h 582 (874)
+.+|++|||+.|++++
T Consensus 259 ~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 259 QYNPKMRPSFLEIISS 274 (277)
T ss_pred CCChhhCcCHHHHHHH
Confidence 9999999999999865
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=263.36 Aligned_cols=207 Identities=16% Similarity=0.069 Sum_probs=157.6
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--------------
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-------------- 323 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-------------- 323 (874)
....+...+....|++++.+.......+. .+++|||+++++|.+++....
T Consensus 53 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 116 (280)
T cd05092 53 DFQREAELLTVLQHQHIVRFYGVCTEGRP----------------LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAP 116 (280)
T ss_pred HHHHHHHHHhcCCCCCCceEEEEEecCCc----------------eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCc
Confidence 34445567777889998887765443222 257999999999999997643
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhh
Q 002843 324 HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEE 403 (874)
Q Consensus 324 ~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~ 403 (874)
..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 117 ~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~------------------- 177 (280)
T cd05092 117 GQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY------------------- 177 (280)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCce-------------------
Confidence 2488999999999999999999999999999999999999999999999998863320000
Q ss_pred hccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccc
Q 002843 404 MFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQ 483 (874)
Q Consensus 404 dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~ 483 (874)
.
T Consensus 178 -------------------------------------~------------------------------------------ 178 (280)
T cd05092 178 -------------------------------------Y------------------------------------------ 178 (280)
T ss_pred -------------------------------------e------------------------------------------
Confidence 0
Q ss_pred ccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHH
Q 002843 484 QQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAG 560 (874)
Q Consensus 484 ~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~d 560 (874)
.......+++.|+|||.+.+..++.++|||||||++|||++ |.+||... ...+..+..+..+.......+.+.+
T Consensus 179 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (280)
T cd05092 179 ---RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYA 255 (280)
T ss_pred ---ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHH
Confidence 00012234578999999998889999999999999999998 88887432 2223333333333333345677999
Q ss_pred HHHHccccCCCCCCChhHHhh
Q 002843 561 FCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 561 Li~~cL~~dP~~RPTa~EiL~ 581 (874)
|+.+||+.||.+||++.+|++
T Consensus 256 li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 256 IMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHHHHccCChhhCCCHHHHHH
Confidence 999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-29 Score=268.41 Aligned_cols=206 Identities=16% Similarity=0.205 Sum_probs=154.8
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..++....|++++.+.+....+.. .+++|||+.+ +|.+++......+++..++.++.||+
T Consensus 51 ~~E~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~ 113 (291)
T cd07844 51 IREASLLKDLKHANIVTLHDIIHTKKT----------------LTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLL 113 (291)
T ss_pred HHHHHHHhhCCCcceeeEEEEEecCCe----------------EEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 345667777789999888776543222 2579999985 99999987655799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 114 ~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~------------------------------------- 156 (291)
T cd07844 114 RGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVP------------------------------------- 156 (291)
T ss_pred HHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCC-------------------------------------
Confidence 9999999999999999999999999999999999987632100
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
. .......++..|+
T Consensus 157 --------------------~----------------------------------------------~~~~~~~~~~~~~ 170 (291)
T cd07844 157 --------------------S----------------------------------------------KTYSNEVVTLWYR 170 (291)
T ss_pred --------------------C----------------------------------------------ccccccccccccC
Confidence 0 0001224567899
Q ss_pred CcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhc---CC---------------------C-C--
Q 002843 500 SPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRD---RI---------------------L-P-- 548 (874)
Q Consensus 500 APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~---~~---------------------l-p-- 548 (874)
|||++.+ ..++.++|||||||++|||++|..||.... ..+..+.. .. . +
T Consensus 171 aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (291)
T cd07844 171 PPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRP 250 (291)
T ss_pred CcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChh
Confidence 9999876 458999999999999999999998873221 11111000 00 0 0
Q ss_pred --CCCCCCC--HHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 549 --PSFLSEN--PKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 549 --p~~~~~~--p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
..+.... +.+.+++.+||+++|.+|||+.|+|+||||
T Consensus 251 ~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 251 LINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred HHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0011222 567899999999999999999999999997
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-28 Score=258.22 Aligned_cols=202 Identities=15% Similarity=0.108 Sum_probs=155.6
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC-CCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~-~lse~e~~~I~~Q 337 (874)
...+..+++...|++++.+......+... .+++|||+++++|.+++.+... .+++..++.++.|
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~---------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 110 (256)
T cd05082 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGG---------------LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 110 (256)
T ss_pred HHHHHHHHHhCCCCCeeeEEEEEEcCCCc---------------eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHH
Confidence 44455667777888888877654433221 2579999999999999986543 5899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+||+++.++.+|++|||+++.....
T Consensus 111 i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~----------------------------------- 155 (256)
T cd05082 111 VCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----------------------------------- 155 (256)
T ss_pred HHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc-----------------------------------
Confidence 999999999999999999999999999999999999987632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. ....++..
T Consensus 156 ------------------------~-----------------------------------------------~~~~~~~~ 164 (256)
T cd05082 156 ------------------------Q-----------------------------------------------DTGKLPVK 164 (256)
T ss_pred ------------------------C-----------------------------------------------CCCcccee
Confidence 0 01122357
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||++.+..++.++|||||||++|||++ |..|+.. .......+.....+.......+.+.+|+.+||+.+|++||
T Consensus 165 y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 244 (256)
T cd05082 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRP 244 (256)
T ss_pred ecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCc
Confidence 999999998889999999999999999997 8877642 2222333433333333334457789999999999999999
Q ss_pred ChhHHhh
Q 002843 575 TTREILQ 581 (874)
Q Consensus 575 Ta~EiL~ 581 (874)
|+.++++
T Consensus 245 t~~~l~~ 251 (256)
T cd05082 245 SFLQLRE 251 (256)
T ss_pred CHHHHHH
Confidence 9999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=265.12 Aligned_cols=210 Identities=18% Similarity=0.213 Sum_probs=165.9
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..+++...||+++.+.+....... .+++|||+.|++|.+++... .+++.+++.|+.||
T Consensus 63 ~~~e~~~l~~~~h~~vv~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql 124 (285)
T cd06648 63 LFNEVVIMRDYQHPNIVEMYSSYLVGDE----------------LWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLAV 124 (285)
T ss_pred HHHHHHHHHHcCCCChheEEEEEEcCCe----------------EEEEEeccCCCCHHHHHHhC--CCCHHHHHHHHHHH
Confidence 3455567777889998888876543222 25799999999999999873 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||+|+||+++.++.++++|||++......
T Consensus 125 ~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~------------------------------------ 168 (285)
T cd06648 125 LKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE------------------------------------ 168 (285)
T ss_pred HHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC------------------------------------
Confidence 99999999999999999999999999999999999987532200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. .......|++.|
T Consensus 169 ----------------------~---------------------------------------------~~~~~~~~~~~y 181 (285)
T cd06648 169 ----------------------V---------------------------------------------PRRKSLVGTPYW 181 (285)
T ss_pred ----------------------C---------------------------------------------cccccccCCccc
Confidence 0 000134578899
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCC---CCCCHHHHHHHHHccccCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSF---LSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~---~~~~p~l~dLi~~cL~~dP~~R 573 (874)
+|||.+.+..++.++|||||||++|||++|..||... ...+..+.... ++.. ....+.+.+|+.+||+++|++|
T Consensus 182 ~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (285)
T cd06648 182 MAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL-PPKLKNLHKVSPRLRSFLDRMLVRDPAQR 260 (285)
T ss_pred cCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC-CCCCcccccCCHHHHHHHHHHcccChhhC
Confidence 9999999888999999999999999999999887432 12233333332 2221 2245779999999999999999
Q ss_pred CChhHHhhhHHHHhhHh
Q 002843 574 PTTREILQSEVTNEFQE 590 (874)
Q Consensus 574 PTa~EiL~hp~~~~~~~ 590 (874)
|++.++++||||+..+.
T Consensus 261 pt~~~il~~~~~~~~~~ 277 (285)
T cd06648 261 ATAAELLNHPFLAKAGP 277 (285)
T ss_pred cCHHHHccCcccccCCC
Confidence 99999999999987664
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=265.01 Aligned_cols=213 Identities=17% Similarity=0.124 Sum_probs=158.6
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------CCCCHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------HKGKRI 329 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---------~~lse~ 329 (874)
...+...+....||+++.+......+.. .+++|||+.||+|.+++.... ..++..
T Consensus 56 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~ 119 (288)
T cd05061 56 FLNEASVMKGFTCHHVVRLLGVVSKGQP----------------TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 119 (288)
T ss_pred HHHHHHHHHhCCCCCeeeEEEEEcCCCC----------------cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHH
Confidence 3445566777788888877665432221 267999999999999997532 235677
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccc
Q 002843 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGI 409 (874)
Q Consensus 330 e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~ 409 (874)
.+..++.||+.||.|||++||+||||||+|||++.++.++++|||+++.......
T Consensus 120 ~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~------------------------- 174 (288)
T cd05061 120 EMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY------------------------- 174 (288)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccccccc-------------------------
Confidence 8899999999999999999999999999999999999999999999874330000
Q ss_pred hhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccc
Q 002843 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSV 489 (874)
Q Consensus 410 ~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~ 489 (874)
. ...
T Consensus 175 -------------------------------~---------------------------------------------~~~ 178 (288)
T cd05061 175 -------------------------------Y---------------------------------------------RKG 178 (288)
T ss_pred -------------------------------c---------------------------------------------ccc
Confidence 0 000
Q ss_pred ccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHcc
Q 002843 490 SEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 490 t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL 566 (874)
....++..|+|||.+.++.++.++|||||||++|||++ |..|+... ......+.....++......+.+.+|+.+||
T Consensus 179 ~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 258 (288)
T cd05061 179 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCW 258 (288)
T ss_pred CCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence 12234567999999998889999999999999999998 67776321 1223333333333333344577999999999
Q ss_pred ccCCCCCCChhHHhh------hHHHHhh
Q 002843 567 HPEPLSRPTTREILQ------SEVTNEF 588 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~------hp~~~~~ 588 (874)
+++|++||++.++++ ||||.++
T Consensus 259 ~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 259 QFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred CCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 999999999999986 6666654
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=262.13 Aligned_cols=210 Identities=17% Similarity=0.099 Sum_probs=156.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...++...|++++.+......++.. ..+++|||++|++|.+++.+....+++.++..++.||
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~--------------~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i 118 (284)
T cd05079 53 LKKEIEILRNLYHENIVKYKGICTEDGGN--------------GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQI 118 (284)
T ss_pred HHHHHHHHHhCCCCCeeeeeeEEecCCCC--------------ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHH
Confidence 33445667777899888776654432111 1257999999999999997765468999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+||+++.++.++|+|||+++.+.....
T Consensus 119 ~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------- 164 (284)
T cd05079 119 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE---------------------------------- 164 (284)
T ss_pred HHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCcc----------------------------------
Confidence 9999999999999999999999999999999999998864320000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. ........++..|
T Consensus 165 ----------------------~--------------------------------------------~~~~~~~~~~~~y 178 (284)
T cd05079 165 ----------------------Y--------------------------------------------YTVKDDLDSPVFW 178 (284)
T ss_pred ----------------------c--------------------------------------------eeecCCCCCCccc
Confidence 0 0000123456689
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH-----------------HHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA-----------------LAAAMSDLRDRILPPSFLSENPKEAGF 561 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~-----------------~~~~~~~l~~~~lpp~~~~~~p~l~dL 561 (874)
+|||++.+..++.++|||||||++|||+++..|... .......+......+.....+..+.+|
T Consensus 179 ~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 258 (284)
T cd05079 179 YAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQL 258 (284)
T ss_pred cCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHH
Confidence 999999888899999999999999999997554311 011122222233333334456789999
Q ss_pred HHHccccCCCCCCChhHHhhh
Q 002843 562 CLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 562 i~~cL~~dP~~RPTa~EiL~h 582 (874)
+.+||+++|.+||++.++++.
T Consensus 259 i~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 259 MRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HHHHccCCcccCcCHHHHHHH
Confidence 999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=255.81 Aligned_cols=208 Identities=17% Similarity=0.151 Sum_probs=160.3
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC--------CCCCCHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR--------GHKGKRI 329 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~--------~~~lse~ 329 (874)
....+..++....|++++.+......+.. .+++|||++|++|.+++... ...+++.
T Consensus 42 ~~~~e~~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 105 (262)
T cd00192 42 DFLKEARVMKKLGHPNVVRLLGVCTEEEP----------------LYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLK 105 (262)
T ss_pred HHHHHHHHHhhcCCCChheeeeeecCCCc----------------eEEEEEeccCCcHHHHHhhccccccccccccCCHH
Confidence 34445556666669988887766543222 25699999999999999876 3479999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccc
Q 002843 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGI 409 (874)
Q Consensus 330 e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~ 409 (874)
+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||.++.......
T Consensus 106 ~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~------------------------- 160 (262)
T cd00192 106 DLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY------------------------- 160 (262)
T ss_pred HHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc-------------------------
Confidence 9999999999999999999999999999999999999999999999874330000
Q ss_pred hhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccc
Q 002843 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSV 489 (874)
Q Consensus 410 ~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~ 489 (874)
....
T Consensus 161 ----------------------------------------------------------------------------~~~~ 164 (262)
T cd00192 161 ----------------------------------------------------------------------------YRKK 164 (262)
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0000
Q ss_pred ccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHcc
Q 002843 490 SEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 490 t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL 566 (874)
....++..|+|||.+.+..++.++|||||||++|||++ |..|+... ......+......+.....++.+.+++.+||
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 244 (262)
T cd00192 165 TGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCW 244 (262)
T ss_pred cCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHc
Confidence 23345678999999998889999999999999999998 58887432 2223344433333333344678999999999
Q ss_pred ccCCCCCCChhHHhhh
Q 002843 567 HPEPLSRPTTREILQS 582 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~h 582 (874)
..+|.+||++.|++.+
T Consensus 245 ~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 245 QLDPEDRPTFSELVER 260 (262)
T ss_pred cCCcccCcCHHHHHHh
Confidence 9999999999999875
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-28 Score=257.55 Aligned_cols=211 Identities=16% Similarity=0.125 Sum_probs=155.5
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..+++...||+++.++........ ..+++|||+.+++|.+++.+....+++..++.++.|
T Consensus 42 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 106 (262)
T cd05058 42 QFLKEGIIMKDFSHPNVLSLLGICLPSEG---------------SPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQ 106 (262)
T ss_pred HHHHHHHHHccCCCCCcceEEEEeecCCC---------------CcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHH
Confidence 34455567778889999887764331111 125799999999999999875546788899999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||+.+|+||||||+|||++.++.+||+|||+++.+.+... +
T Consensus 107 i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~--------------------~------------ 154 (262)
T cd05058 107 VAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY--------------------Y------------ 154 (262)
T ss_pred HHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcc--------------------e------------
Confidence 99999999999999999999999999999999999999874331000 0
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.. .......++..
T Consensus 155 ----------------------~~---------------------------------------------~~~~~~~~~~~ 167 (262)
T cd05058 155 ----------------------SV---------------------------------------------HNHTGAKLPVK 167 (262)
T ss_pred ----------------------ee---------------------------------------------cccccCcCCcc
Confidence 00 00012244568
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCC-CCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGR-FDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG-~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.+..++.++|||||||++|||++| .+|+... ......+.....++......+.+.+++.+||+++|++||
T Consensus 168 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 247 (262)
T cd05058 168 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRP 247 (262)
T ss_pred ccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCC
Confidence 9999999888899999999999999999994 6665321 112222332222222222346788999999999999999
Q ss_pred ChhHHhhh
Q 002843 575 TTREILQS 582 (874)
Q Consensus 575 Ta~EiL~h 582 (874)
++.+++..
T Consensus 248 ~~~~il~~ 255 (262)
T cd05058 248 TFSELVSR 255 (262)
T ss_pred CHHHHHHH
Confidence 99999764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=257.68 Aligned_cols=205 Identities=17% Similarity=0.103 Sum_probs=157.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......+.. .+++|||++||+|.+++......+++..++.++.||
T Consensus 46 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i 109 (256)
T cd05114 46 FIEEAKVMMKLSHPKLVQLYGVCTQQKP----------------LYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDV 109 (256)
T ss_pred HHHHHHHHHHCCCCCceeEEEEEccCCC----------------EEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHH
Confidence 3445567777789998888766443222 257999999999999997654469999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+||+++.++.+|++|||+++.......
T Consensus 110 ~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~---------------------------------- 155 (256)
T cd05114 110 CEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY---------------------------------- 155 (256)
T ss_pred HHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCce----------------------------------
Confidence 9999999999999999999999999999999999998763320000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......++..|
T Consensus 156 --------------------------------------------------------------------~~~~~~~~~~~y 167 (256)
T cd05114 156 --------------------------------------------------------------------TSSSGAKFPVKW 167 (256)
T ss_pred --------------------------------------------------------------------eccCCCCCchhh
Confidence 000112244579
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
+|||++.+..++.++|||||||++|||++ |..||... ......+.....+.........+.+|+.+||..+|.+||+
T Consensus 168 ~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps 247 (256)
T cd05114 168 SPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPT 247 (256)
T ss_pred CChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcC
Confidence 99999998889999999999999999999 88887432 2233444443332222234567899999999999999999
Q ss_pred hhHHhh
Q 002843 576 TREILQ 581 (874)
Q Consensus 576 a~EiL~ 581 (874)
+.++++
T Consensus 248 ~~~l~~ 253 (256)
T cd05114 248 FAELLR 253 (256)
T ss_pred HHHHHH
Confidence 999976
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-28 Score=263.33 Aligned_cols=204 Identities=13% Similarity=0.079 Sum_probs=152.6
Q ss_pred cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHH
Q 002843 269 NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYH 345 (874)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I~~QIl~aL~yL 345 (874)
..||+++.+........... +...+++|||++|++|.++++. .+..+++..++.++.||+.||.||
T Consensus 76 ~~h~ni~~~~~~~~~~~~~~-----------~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l 144 (291)
T cd06639 76 PNHPNVVKFYGMFYKADKLV-----------GGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHL 144 (291)
T ss_pred cCCCCeEEEEEEEEeccccC-----------CCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 36888888776644221100 0123679999999999999864 334799999999999999999999
Q ss_pred HHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccc
Q 002843 346 HTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSR 425 (874)
Q Consensus 346 Hs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~ 425 (874)
|+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 145 H~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~----------------------------------------- 183 (291)
T cd06639 145 HNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL----------------------------------------- 183 (291)
T ss_pred HhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccc-----------------------------------------
Confidence 999999999999999999999999999998764320000
Q ss_pred ccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccccc
Q 002843 426 WWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS 505 (874)
Q Consensus 426 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~ 505 (874)
......|+..|+|||.+.
T Consensus 184 --------------------------------------------------------------~~~~~~~~~~y~aPE~~~ 201 (291)
T cd06639 184 --------------------------------------------------------------RRNTSVGTPFWMAPEVIA 201 (291)
T ss_pred --------------------------------------------------------------cccCccCCccccChhhhc
Confidence 001235678999999986
Q ss_pred CC-----CCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCC--CCCCCHHHHHHHHHccccCCCCCCCh
Q 002843 506 GG-----VCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPS--FLSENPKEAGFCLWQLHPEPLSRPTT 576 (874)
Q Consensus 506 g~-----~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~--~~~~~p~l~dLi~~cL~~dP~~RPTa 576 (874)
.. .++.++|||||||++|||++|+.|+..... ....+.....+.. .......+.+||.+||+.+|++||++
T Consensus 202 ~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~ 281 (291)
T cd06639 202 CEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSV 281 (291)
T ss_pred CCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCH
Confidence 53 268999999999999999999999754321 1222322222211 11233568899999999999999999
Q ss_pred hHHhhhHHHH
Q 002843 577 REILQSEVTN 586 (874)
Q Consensus 577 ~EiL~hp~~~ 586 (874)
.|+++||||+
T Consensus 282 ~~il~~~~~~ 291 (291)
T cd06639 282 THLLEHPFIK 291 (291)
T ss_pred HHHhcCcccC
Confidence 9999999984
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=263.59 Aligned_cols=214 Identities=19% Similarity=0.146 Sum_probs=160.7
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLY 333 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~ 333 (874)
.....+...+....||+++.+.......... ..+++|||++|++|.+++.. ....+++..+..
T Consensus 44 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~ 109 (287)
T cd06621 44 KQILRELEINKSCKSPYIVKYYGAFLDESSS--------------SIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGK 109 (287)
T ss_pred HHHHHHHHHHHhCCCCCeeeeeeEEEccCCC--------------eEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHH
Confidence 3345555677778899988877654321111 12579999999999998753 334689999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
|+.||+.||+|||+.|++|+||+|+||+++.++.++++|||++.......
T Consensus 110 i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------ 159 (287)
T cd06621 110 IAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL------------------------------ 159 (287)
T ss_pred HHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc------------------------------
Confidence 99999999999999999999999999999999999999999875322000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
.....
T Consensus 160 ---------------------------------------------------------------------------~~~~~ 164 (287)
T cd06621 160 ---------------------------------------------------------------------------AGTFT 164 (287)
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 01223
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH-------HHHHHHhhcCC---CCCCCC---CCCHHHHH
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL-------AAAMSDLRDRI---LPPSFL---SENPKEAG 560 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~-------~~~~~~l~~~~---lpp~~~---~~~p~l~d 560 (874)
++..|+|||.+.+..++.++|||||||++|+|++|..|+... ......+.... ++.... ...+.+.+
T Consensus 165 ~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (287)
T cd06621 165 GTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKD 244 (287)
T ss_pred CCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHH
Confidence 567899999999888999999999999999999998887533 11222222211 111111 12356889
Q ss_pred HHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 561 FCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 561 Li~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
|+.+||.++|++|||+.|++.||||....
T Consensus 245 li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 245 FIKQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred HHHHHcCCCcccCCCHHHHHhCccccccc
Confidence 99999999999999999999999996543
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=262.58 Aligned_cols=209 Identities=17% Similarity=0.192 Sum_probs=157.3
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......... .+++|||+ |++|.+++......+++.+++.++.||
T Consensus 46 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~----------------~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i 108 (286)
T cd07832 46 ALREIKALQACQHPYVVKLLDVFPHGSG----------------FVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRML 108 (286)
T ss_pred HHHHHHHHHhCCCCCCcceeeEEecCCe----------------eEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 3444556666779988887776543221 35799999 999999997765579999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||+.||+|+||||+||+++.++.++++|||++.......
T Consensus 109 ~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~----------------------------------- 153 (286)
T cd07832 109 LKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE----------------------------------- 153 (286)
T ss_pred HHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC-----------------------------------
Confidence 999999999999999999999999999999999999876332000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
........|+.+|
T Consensus 154 -------------------------------------------------------------------~~~~~~~~~~~~y 166 (286)
T cd07832 154 -------------------------------------------------------------------PRLYSHQVATRWY 166 (286)
T ss_pred -------------------------------------------------------------------CCccccccCcccc
Confidence 0000234678899
Q ss_pred cCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHHHH------HHHHhhcC-----------------CC-------
Q 002843 499 ASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERALAA------AMSDLRDR-----------------IL------- 547 (874)
Q Consensus 499 ~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~~~------~~~~l~~~-----------------~l------- 547 (874)
+|||.+.+.. ++.++|||||||++|||++|.+++..... .+..+... ..
T Consensus 167 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (286)
T cd07832 167 RAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIP 246 (286)
T ss_pred cCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcch
Confidence 9999987644 68999999999999999999777632111 11111000 00
Q ss_pred -CCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHH
Q 002843 548 -PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (874)
Q Consensus 548 -pp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~ 586 (874)
...+......+.+|+.+||.++|.+||+++++|.||||.
T Consensus 247 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 247 LEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred HHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 011123346788999999999999999999999999984
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=260.45 Aligned_cols=210 Identities=18% Similarity=0.145 Sum_probs=164.8
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......+.. .+++|||++|++|.++|.+.. .+++..+..++.||
T Consensus 40 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i 102 (262)
T cd05572 40 IFSEKEILEECNHPFIVKLYRTFKDKKY----------------IYMLMEYCLGGELWTILRDRG-LFDEYTARFYIACV 102 (262)
T ss_pred HHHHHHHHHhCCCCCEeeeeeeEEcCCc----------------cEEEEecCCCCcHHHHHhhcC-CCCHHHHHHHHHHH
Confidence 4445567778889998888776543322 256999999999999998765 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++|++|+||||+||+++.++.++|+|||+++......
T Consensus 103 ~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----------------------------------- 147 (262)
T cd05572 103 VLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----------------------------------- 147 (262)
T ss_pred HHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----------------------------------
Confidence 999999999999999999999999999999999999876332000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......|++.|
T Consensus 148 ---------------------------------------------------------------------~~~~~~~~~~~ 158 (262)
T cd05572 148 ---------------------------------------------------------------------KTWTFCGTPEY 158 (262)
T ss_pred ---------------------------------------------------------------------ccccccCCcCc
Confidence 00123567899
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH----HHHHHhhcCCCCCCCC-CCCHHHHHHHHHccccCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA----AAMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~----~~~~~l~~~~lpp~~~-~~~p~l~dLi~~cL~~dP~~R 573 (874)
+|||.+.+..++.++|+|||||++|+|++|..|+.... ..+..+........++ ...+.+.+||.+||..+|.+|
T Consensus 159 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 238 (262)
T cd05572 159 VAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEER 238 (262)
T ss_pred cChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhC
Confidence 99999988889999999999999999999998874322 2233333212222222 225678999999999999999
Q ss_pred CC-----hhHHhhhHHHHhhH
Q 002843 574 PT-----TREILQSEVTNEFQ 589 (874)
Q Consensus 574 PT-----a~EiL~hp~~~~~~ 589 (874)
|+ +.|+++||||+...
T Consensus 239 ~~~~~~~~~~l~~~~~~~~~~ 259 (262)
T cd05572 239 LGNLKGGIKDIKKHKWFNGFD 259 (262)
T ss_pred cCCcccCHHHHhcChhhhCCC
Confidence 99 99999999998753
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=275.70 Aligned_cols=186 Identities=18% Similarity=0.242 Sum_probs=155.1
Q ss_pred CceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 303 GLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
.|+||..|+||+|.-+|-+.+ ..|++..++.++.+|+.||.+||..+||.|||||+|||||+.|+++|+|+|||-++.+
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 489999999999999997643 4799999999999999999999999999999999999999999999999999875441
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
.
T Consensus 340 g------------------------------------------------------------------------------- 340 (591)
T KOG0986|consen 340 G------------------------------------------------------------------------------- 340 (591)
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHH-
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMS- 540 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~- 540 (874)
......+||.+|||||++.++.|++..|.|||||+||||+.|..||........
T Consensus 341 -------------------------~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~ 395 (591)
T KOG0986|consen 341 -------------------------KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR 395 (591)
T ss_pred -------------------------CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH
Confidence 011456999999999999999999999999999999999999999976554322
Q ss_pred -HhhcCCC--CCCCC-CCCHHHHHHHHHccccCCCCCC-----ChhHHhhhHHHHhhHhhh
Q 002843 541 -DLRDRIL--PPSFL-SENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEFQEVC 592 (874)
Q Consensus 541 -~l~~~~l--pp~~~-~~~p~l~dLi~~cL~~dP~~RP-----Ta~EiL~hp~~~~~~~~~ 592 (874)
.+.++++ +..+. ..+++..+||..+|+.||++|. .+.++.+||||+.+.+-.
T Consensus 396 eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~r 456 (591)
T KOG0986|consen 396 EEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRR 456 (591)
T ss_pred HHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhH
Confidence 3444333 22333 3347789999999999999996 467999999999876554
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=263.79 Aligned_cols=208 Identities=18% Similarity=0.123 Sum_probs=162.7
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+.+....... .+++|||++|++|.+++...+ .+++..++.++.
T Consensus 48 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ 110 (284)
T cd06620 48 KQILRELQIMHECRSPYIVSFYGAFLNENN----------------ICMCMEFMDCGSLDRIYKKGG-PIPVEILGKIAV 110 (284)
T ss_pred HHHHHHHHHHHHcCCCCcceEeeeEecCCE----------------EEEEEecCCCCCHHHHHHhcc-CCCHHHHHHHHH
Confidence 334455566777789999988877664432 257999999999999998765 799999999999
Q ss_pred HHHHHHHHHHH-CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 337 QIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 337 QIl~aL~yLHs-~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
||+.||.|||+ .+|+||||||+||+++.++.++|+|||++......
T Consensus 111 ~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~--------------------------------- 157 (284)
T cd06620 111 AVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS--------------------------------- 157 (284)
T ss_pred HHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh---------------------------------
Confidence 99999999997 69999999999999999999999999987532200
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
......|+
T Consensus 158 ------------------------------------------------------------------------~~~~~~~~ 165 (284)
T cd06620 158 ------------------------------------------------------------------------IADTFVGT 165 (284)
T ss_pred ------------------------------------------------------------------------ccCccccC
Confidence 00123678
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH-------------HHHHhhcCCCCCCCC--CCCHHHHH
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA-------------AMSDLRDRILPPSFL--SENPKEAG 560 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~-------------~~~~l~~~~lpp~~~--~~~p~l~d 560 (874)
..|+|||++.+..++.++|||||||++|+|++|..||..... ....+.... ++.+. .....+.+
T Consensus 166 ~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 244 (284)
T cd06620 166 STYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-PPRLPSSDFPEDLRD 244 (284)
T ss_pred cccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-CCCCCchhcCHHHHH
Confidence 899999999888899999999999999999999998853211 111222111 12221 23467889
Q ss_pred HHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 561 FCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 561 Li~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
|+.+||.+||.+|||+.|+++|+||..
T Consensus 245 li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 245 FVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred HHHHHhcCCcccCcCHHHHhcCccccc
Confidence 999999999999999999999998865
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-28 Score=257.18 Aligned_cols=206 Identities=16% Similarity=0.116 Sum_probs=157.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+.......+. .+++|||++|++|.+++......+++..++.|+.||
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi 109 (256)
T cd05059 46 FIEEAKVMMKLSHPNLVQLYGVCTKQRP----------------IFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDV 109 (256)
T ss_pred HHHHHHHHHhCCCCCEEEEEEEEcCCCc----------------eEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHH
Confidence 3445566777789988877665432222 257999999999999998755579999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+||+++.++.+|++|||+++...+...
T Consensus 110 ~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~---------------------------------- 155 (256)
T cd05059 110 CEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY---------------------------------- 155 (256)
T ss_pred HHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccc----------------------------------
Confidence 9999999999999999999999999999999999998763320000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. + .....++..|
T Consensus 156 ----------------------~-------------------------------------~---------~~~~~~~~~y 167 (256)
T cd05059 156 ----------------------T-------------------------------------S---------SQGTKFPVKW 167 (256)
T ss_pred ----------------------c-------------------------------------c---------cCCCCCCccc
Confidence 0 0 0011234579
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
+|||.+.+..++.++|||||||++|||++ |..||.. .......+.....++......+.+.+++.+||+.+|++|||
T Consensus 168 ~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt 247 (256)
T cd05059 168 APPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPA 247 (256)
T ss_pred cCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcC
Confidence 99999998889999999999999999998 7887732 22223344433333333445678999999999999999999
Q ss_pred hhHHhhh
Q 002843 576 TREILQS 582 (874)
Q Consensus 576 a~EiL~h 582 (874)
+.|+++.
T Consensus 248 ~~~~l~~ 254 (256)
T cd05059 248 FKKLLSQ 254 (256)
T ss_pred HHHHHHH
Confidence 9999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=261.50 Aligned_cols=198 Identities=18% Similarity=0.214 Sum_probs=153.9
Q ss_pred CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002843 270 ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG 349 (874)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~g 349 (874)
.||+++.+......+.. .+++|||++|++|.+++... .+++..++.++.||+.||.|||+.|
T Consensus 60 ~~~~vi~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~ 121 (277)
T cd06917 60 QPPNITKYYGSYLKGPR----------------LWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVG 121 (277)
T ss_pred CCCCeeeEeeeeeeCCE----------------EEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 47877776665432221 25799999999999999764 6999999999999999999999999
Q ss_pred CcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccccccc
Q 002843 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (874)
Q Consensus 350 IIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~ 429 (874)
|+|+||+|+||+++.++.++++|||++.......
T Consensus 122 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---------------------------------------------- 155 (277)
T cd06917 122 VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS---------------------------------------------- 155 (277)
T ss_pred cccCCcCHHHEEEcCCCCEEEccCCceeecCCCc----------------------------------------------
Confidence 9999999999999999999999999876332000
Q ss_pred CCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC-C
Q 002843 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-V 508 (874)
Q Consensus 430 ~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~-~ 508 (874)
.......|+..|+|||.+.++ .
T Consensus 156 ---------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~ 178 (277)
T cd06917 156 ---------------------------------------------------------SKRSTFVGTPYWMAPEVITEGKY 178 (277)
T ss_pred ---------------------------------------------------------cccccccCCcceeCHHHhccCCc
Confidence 000233578899999998754 4
Q ss_pred CCCccchhHHHHHHHHhcCCCCchHHHHHH--HHHhhcCCCCCCCCC--CCHHHHHHHHHccccCCCCCCChhHHhhhHH
Q 002843 509 CTTSSNIYSLGVLFFELFGRFDSERALAAA--MSDLRDRILPPSFLS--ENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (874)
Q Consensus 509 ys~kSDIwSLGVIL~ELltG~~p~~~~~~~--~~~l~~~~lpp~~~~--~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~ 584 (874)
++.++|||||||++|+|++|..||...... ...+. ...++.+.. ....+.+|+.+||..||++||++.+++.|+|
T Consensus 179 ~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~ 257 (277)
T cd06917 179 YDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP-KSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKW 257 (277)
T ss_pred cccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc-cCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChH
Confidence 789999999999999999999998543221 11111 122333322 3467899999999999999999999999999
Q ss_pred HHhhH
Q 002843 585 TNEFQ 589 (874)
Q Consensus 585 ~~~~~ 589 (874)
|....
T Consensus 258 ~~~~~ 262 (277)
T cd06917 258 IKAHS 262 (277)
T ss_pred hhccc
Confidence 97654
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-28 Score=257.99 Aligned_cols=207 Identities=16% Similarity=0.112 Sum_probs=157.7
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFR 336 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~ 336 (874)
....+..++....|++++.+......++. .+++|||+++++|.+++... ...+++..++.++.
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ 111 (263)
T cd05052 48 EFLKEAAVMKEIKHPNLVQLLGVCTREPP----------------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 111 (263)
T ss_pred HHHHHHHHHHhCCCCChhheEEEEcCCCC----------------cEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHH
Confidence 34445567777889998888766443332 25699999999999999764 33689999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 112 ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-------------------------------- 159 (263)
T cd05052 112 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-------------------------------- 159 (263)
T ss_pred HHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccccccee--------------------------------
Confidence 999999999999999999999999999999999999999863320000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......++.
T Consensus 160 ----------------------------------------------------------------------~~~~~~~~~~ 169 (263)
T cd05052 160 ----------------------------------------------------------------------TAHAGAKFPI 169 (263)
T ss_pred ----------------------------------------------------------------------eccCCCCCcc
Confidence 0000112345
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||.+.+..++.++|||||||++|||++ |..|+.. .......+.....++......+.+.+++.+||..+|++|
T Consensus 170 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 249 (263)
T cd05052 170 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDR 249 (263)
T ss_pred ccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccC
Confidence 7999999998889999999999999999998 8877732 222233343333333333445779999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
|++.++++.
T Consensus 250 p~~~~l~~~ 258 (263)
T cd05052 250 PSFAEIHQA 258 (263)
T ss_pred CCHHHHHHH
Confidence 999999764
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=262.25 Aligned_cols=206 Identities=16% Similarity=0.174 Sum_probs=155.9
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..+++...|++++.+......+.. .+++|||+++++|..++.... .+++.+++.++.||+
T Consensus 48 ~~e~~~l~~~~h~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~ 110 (286)
T cd07847 48 LREIRMLKQLKHPNLVNLIEVFRRKRK----------------LHLVFEYCDHTVLNELEKNPR-GVPEHLIKKIIWQTL 110 (286)
T ss_pred HHHHHHHHhCCCCCEeeeeeEEeeCCE----------------EEEEEeccCccHHHHHHhCCC-CCCHHHHHHHHHHHH
Confidence 345566777789988887776553322 256999999999988887655 699999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||++||+||||||+||+++.++.+||+|||++..+....
T Consensus 111 ~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------ 154 (286)
T cd07847 111 QAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG------------------------------------ 154 (286)
T ss_pred HHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCc------------------------------------
Confidence 99999999999999999999999999999999999886432000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.......++.+|+
T Consensus 155 -------------------------------------------------------------------~~~~~~~~~~~~~ 167 (286)
T cd07847 155 -------------------------------------------------------------------DDYTDYVATRWYR 167 (286)
T ss_pred -------------------------------------------------------------------ccccCcccccccC
Confidence 0001234677999
Q ss_pred CcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhh---cC------------------CCCC------
Q 002843 500 SPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLR---DR------------------ILPP------ 549 (874)
Q Consensus 500 APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~---~~------------------~lpp------ 549 (874)
|||++.+ ..++.++|||||||++|||++|..||..... ....+. .. ..+.
T Consensus 168 aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (286)
T cd07847 168 APELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREP 247 (286)
T ss_pred CHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccC
Confidence 9999876 4588999999999999999999988732111 111100 00 0010
Q ss_pred ---CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 550 ---SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 550 ---~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
.+......+.+||.+||.++|++||++.|+|.||||
T Consensus 248 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 248 LESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred HHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 012334668899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=258.68 Aligned_cols=218 Identities=16% Similarity=0.160 Sum_probs=164.9
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....|++++.+......+.. .+++|||++|++|.+++.+.+ .+++.++..++.||
T Consensus 40 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi 102 (265)
T cd05579 40 VLTERDILSQAQSPYVVKLYYSFQGKKN----------------LYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEI 102 (265)
T ss_pred HHHHHHHHHhCCCcchhHHHHheecCcE----------------EEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 3444456777779988887665442222 357999999999999998866 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+|+||+|+||+++.++.++++|||++........ .
T Consensus 103 ~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------~--- 149 (265)
T cd05579 103 VLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQ------------------------------I--- 149 (265)
T ss_pred HHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcc------------------------------c---
Confidence 9999999999999999999999999999999999998763220000 0
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.... .........++..|
T Consensus 150 ----------------~~~~----------------------------------------------~~~~~~~~~~~~~~ 167 (265)
T cd05579 150 ----------------NLND----------------------------------------------DEKEDKRIVGTPDY 167 (265)
T ss_pred ----------------cccc----------------------------------------------ccccccCcccCccc
Confidence 0000 00000234567899
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
+|||.+.+..++.++|||||||++|+|++|..|+.. .......+.. ...++......+.+.+|+.+||+.+|.+|||
T Consensus 168 ~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt 247 (265)
T cd05579 168 IAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLG 247 (265)
T ss_pred cCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCC
Confidence 999999888899999999999999999999988732 1222233332 2223333334678899999999999999999
Q ss_pred h---hHHhhhHHHHhh
Q 002843 576 T---REILQSEVTNEF 588 (874)
Q Consensus 576 a---~EiL~hp~~~~~ 588 (874)
+ .++|+||||+.+
T Consensus 248 ~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 248 AKSIEEIKNHPFFKGI 263 (265)
T ss_pred CccHHHHhcCccccCC
Confidence 9 999999999865
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-28 Score=256.22 Aligned_cols=206 Identities=18% Similarity=0.165 Sum_probs=161.2
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..+++...|++++.+......+.. .+++|||++|++|.+++.+.+ .+++..+..++.||
T Consensus 49 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i 111 (258)
T cd06632 49 LEQEIALLSKLQHPNIVQYLGTEREEDN----------------LYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQI 111 (258)
T ss_pred HHHHHHHHHhcCCCCchheeeeEecCCe----------------EEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 4445567777889988887765442222 257999999999999998765 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||+.||+|+||+|+||+++.++.+||+|||++.......
T Consensus 112 ~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~----------------------------------- 156 (258)
T cd06632 112 LLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS----------------------------------- 156 (258)
T ss_pred HHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc-----------------------------------
Confidence 999999999999999999999999999999999999876322000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......|+..|
T Consensus 157 ---------------------------------------------------------------------~~~~~~~~~~y 167 (258)
T cd06632 157 ---------------------------------------------------------------------FAKSFKGSPYW 167 (258)
T ss_pred ---------------------------------------------------------------------cccccCCCcce
Confidence 00234577899
Q ss_pred cCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 499 ASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 499 ~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
+|||.+.... ++.++|+|||||++|+|++|..||..... ....+.. ...+.......+.+.+|+.+||..+|.+||
T Consensus 168 ~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 247 (258)
T cd06632 168 MAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRP 247 (258)
T ss_pred eCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCc
Confidence 9999998766 89999999999999999999999844321 1112222 222222233457789999999999999999
Q ss_pred ChhHHhhhHHH
Q 002843 575 TTREILQSEVT 585 (874)
Q Consensus 575 Ta~EiL~hp~~ 585 (874)
++.++|.|||+
T Consensus 248 ~~~~~l~~~~~ 258 (258)
T cd06632 248 TAAELLEHPFV 258 (258)
T ss_pred CHHHHhcCCCC
Confidence 99999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=259.07 Aligned_cols=212 Identities=17% Similarity=0.167 Sum_probs=162.0
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...++...|++++.+.+....... .+++|||++|++|.+++.+.+ .+++..+..++.||
T Consensus 50 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql 112 (268)
T cd06630 50 LRKEIRLMARLNHPHIIRMLGATCEDSH----------------FNLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQL 112 (268)
T ss_pred HHHHHHHHHHcCCCceehhhceeccCCe----------------EEEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHH
Confidence 4455667777889988888776542222 257999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCC-cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~-~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
+.||.|||++||+|+||||+||+++.++ .+||+|||++........
T Consensus 113 ~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~--------------------------------- 159 (268)
T cd06630 113 LRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT--------------------------------- 159 (268)
T ss_pred HHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccc---------------------------------
Confidence 9999999999999999999999998775 599999998764330000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.. . .......|+..
T Consensus 160 ----------------------~~--------------------------~------------------~~~~~~~~~~~ 173 (268)
T cd06630 160 ----------------------GA--------------------------G------------------EFQGQLLGTIA 173 (268)
T ss_pred ----------------------cC--------------------------C------------------ccccccccccc
Confidence 00 0 00023467889
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH-----HHHHHHhhcCCCCCCC-CCCCHHHHHHHHHccccCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL-----AAAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~-----~~~~~~l~~~~lpp~~-~~~~p~l~dLi~~cL~~dP~ 571 (874)
|+|||.+.+..++.++|||||||++|+|++|..|+... ...+..+......+.+ ....+.+.+++.+||..+|.
T Consensus 174 ~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~ 253 (268)
T cd06630 174 FMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPE 253 (268)
T ss_pred eeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcc
Confidence 99999998888999999999999999999999887421 1112122222222222 23457789999999999999
Q ss_pred CCCChhHHhhhHHHH
Q 002843 572 SRPTTREILQSEVTN 586 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~ 586 (874)
+||++.++++||||.
T Consensus 254 ~R~~~~~ll~~~~~~ 268 (268)
T cd06630 254 DRPPSRELLKHPVFR 268 (268)
T ss_pred cCcCHHHHhcCcccC
Confidence 999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=258.72 Aligned_cols=212 Identities=15% Similarity=0.130 Sum_probs=160.9
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--CCCCHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--HKGKRIECLYIF 335 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~--~~lse~e~~~I~ 335 (874)
....+...++...|++++.+......+.. .+++|||++|++|.+++.... ..+++..+..++
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 108 (267)
T cd06610 45 ELRKEVQAMSQCNHPNVVKYYTSFVVGDE----------------LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVL 108 (267)
T ss_pred HHHHHHHHHHhcCCCCEEEEEEEEeeCCE----------------EEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHH
Confidence 34444556778889988887665432221 257999999999999997642 368999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
.||+.||.|||++||+||||||+||+++.++.++|+|||++........
T Consensus 109 ~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~------------------------------- 157 (267)
T cd06610 109 KEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD------------------------------- 157 (267)
T ss_pred HHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc-------------------------------
Confidence 9999999999999999999999999999999999999999874431000
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
.. ........|+
T Consensus 158 ------------------------~~--------------------------------------------~~~~~~~~~~ 169 (267)
T cd06610 158 ------------------------RT--------------------------------------------RKVRKTFVGT 169 (267)
T ss_pred ------------------------cc--------------------------------------------ccccccccCC
Confidence 00 0000234678
Q ss_pred ccccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCCC------CCCCHHHHHHHHHcc
Q 002843 496 KWYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPSF------LSENPKEAGFCLWQL 566 (874)
Q Consensus 496 ~~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~~------~~~~p~l~dLi~~cL 566 (874)
..|+|||++... .++.++|+|||||++|||++|..|+..... .+...... .++.+ ....+.+.+|+.+||
T Consensus 170 ~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l 248 (267)
T cd06610 170 PCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN-DPPSLETGADYKKYSKSFRKMISLCL 248 (267)
T ss_pred hhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC-CCCCcCCccccccccHHHHHHHHHHc
Confidence 899999999876 689999999999999999999999854321 11111111 11111 233467889999999
Q ss_pred ccCCCCCCChhHHhhhHHH
Q 002843 567 HPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~ 585 (874)
..||++||++.++++||||
T Consensus 249 ~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 249 QKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred CCChhhCcCHHHHhhCCCC
Confidence 9999999999999999997
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=262.83 Aligned_cols=204 Identities=15% Similarity=0.137 Sum_probs=155.2
Q ss_pred HHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC---------------CCC
Q 002843 262 GAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---------------GHK 325 (874)
Q Consensus 262 ~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~---------------~~~ 325 (874)
+...+... .|++++.+......++. .+++|||+++++|.+++... ...
T Consensus 65 E~~~l~~l~~h~~i~~~~~~~~~~~~----------------~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~ 128 (293)
T cd05053 65 EMEMMKMIGKHKNIINLLGVCTQEGP----------------LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEET 128 (293)
T ss_pred HHHHHHhhcCCCCeeeEEEEEcCCCC----------------eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccc
Confidence 33344444 78998887765443222 25799999999999999642 236
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhc
Q 002843 326 GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMF 405 (874)
Q Consensus 326 lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~df 405 (874)
+++..++.++.||+.||+|||+.||+||||||+|||++.++.+|++|||+++.+.....
T Consensus 129 l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--------------------- 187 (293)
T cd05053 129 LTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDY--------------------- 187 (293)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccc---------------------
Confidence 89999999999999999999999999999999999999999999999999874330000
Q ss_pred cccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccc
Q 002843 406 TTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQ 485 (874)
Q Consensus 406 g~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~ 485 (874)
.
T Consensus 188 -----------------------------------~-------------------------------------------- 188 (293)
T cd05053 188 -----------------------------------Y-------------------------------------------- 188 (293)
T ss_pred -----------------------------------e--------------------------------------------
Confidence 0
Q ss_pred ccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 002843 486 STSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFC 562 (874)
Q Consensus 486 ~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi 562 (874)
.......++..|+|||++.+..++.++|||||||++|||++ |..|+... ......+.....++........+.+|+
T Consensus 189 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 267 (293)
T cd05053 189 -RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLM 267 (293)
T ss_pred -eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHH
Confidence 00011223457999999988889999999999999999997 87776432 223444444444444445567899999
Q ss_pred HHccccCCCCCCChhHHhhh
Q 002843 563 LWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 563 ~~cL~~dP~~RPTa~EiL~h 582 (874)
.+||.++|++|||+.|++++
T Consensus 268 ~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 268 RDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHcccCcccCcCHHHHHHH
Confidence 99999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-28 Score=259.66 Aligned_cols=211 Identities=17% Similarity=0.108 Sum_probs=154.8
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....||+++.+.......+.. ..+++|||++|++|.+++......+++..++.++.|
T Consensus 51 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~ 116 (284)
T cd05081 51 DFEREIEILKSLQHDNIVKYKGVCYSAGRR--------------NLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQ 116 (284)
T ss_pred HHHHHHHHHHhCCCCCeeEEEEEEccCCCC--------------ceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHH
Confidence 334455677778899988876653322111 136799999999999999775447999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+||+++.++.+||+|||+++.+.....
T Consensus 117 l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------- 163 (284)
T cd05081 117 ICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKE--------------------------------- 163 (284)
T ss_pred HHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCc---------------------------------
Confidence 99999999999999999999999999999999999999874330000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.. .......++..
T Consensus 164 ----------------------~~---------------------------------------------~~~~~~~~~~~ 176 (284)
T cd05081 164 ----------------------YY---------------------------------------------KVREPGESPIF 176 (284)
T ss_pred ----------------------ce---------------------------------------------eecCCCCCceE
Confidence 00 00001122346
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH------------------HHHHhhcCCCCCCCCCCCHHHH
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA------------------AMSDLRDRILPPSFLSENPKEA 559 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~------------------~~~~l~~~~lpp~~~~~~p~l~ 559 (874)
|+|||++.+..++.++|||||||++|||++|..++..... ....+.....++........+.
T Consensus 177 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (284)
T cd05081 177 WYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIY 256 (284)
T ss_pred eeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHH
Confidence 9999999988899999999999999999997554321110 1111222223333344557799
Q ss_pred HHHHHccccCCCCCCChhHHhhh
Q 002843 560 GFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 560 dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+|+.+||.++|++|||+.|+++.
T Consensus 257 ~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 257 AIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred HHHHHHccCChhhCCCHHHHHHH
Confidence 99999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-28 Score=257.87 Aligned_cols=207 Identities=17% Similarity=0.111 Sum_probs=158.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------CCCCHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------HKGKRI 329 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---------~~lse~ 329 (874)
...+..++....|++++.+.+....+.. .+++|||+++++|.+++.... ..+++.
T Consensus 56 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 119 (277)
T cd05032 56 FLNEASVMKEFNCHHVVRLLGVVSTGQP----------------TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQ 119 (277)
T ss_pred HHHHHHHHHhCCCCceeEEEEEEcCCCC----------------cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHH
Confidence 3445566777789999988876553322 357999999999999996532 147888
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccc
Q 002843 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGI 409 (874)
Q Consensus 330 e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~ 409 (874)
.++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 120 ~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~------------------------- 174 (277)
T cd05032 120 KFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDY------------------------- 174 (277)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCcc-------------------------
Confidence 9999999999999999999999999999999999999999999999874330000
Q ss_pred hhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccc
Q 002843 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSV 489 (874)
Q Consensus 410 ~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~ 489 (874)
. ...
T Consensus 175 -------------------------------~---------------------------------------------~~~ 178 (277)
T cd05032 175 -------------------------------Y---------------------------------------------RKG 178 (277)
T ss_pred -------------------------------c---------------------------------------------ccC
Confidence 0 000
Q ss_pred ccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHcc
Q 002843 490 SEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 490 t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL 566 (874)
....++..|+|||.+.++.++.++|||||||++|||++ |..|+.. .......+.....++........+.+|+.+||
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 258 (277)
T cd05032 179 GKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCW 258 (277)
T ss_pred CCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence 12345678999999988889999999999999999998 8888743 22233444433333333334577899999999
Q ss_pred ccCCCCCCChhHHhhh
Q 002843 567 HPEPLSRPTTREILQS 582 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~h 582 (874)
.++|++|||+.++++.
T Consensus 259 ~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 259 QYNPKMRPTFLEIVSS 274 (277)
T ss_pred CCChhhCCCHHHHHHH
Confidence 9999999999999763
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-28 Score=255.31 Aligned_cols=206 Identities=16% Similarity=0.087 Sum_probs=156.5
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....|++++.+..... +. ..+++|||+++++|.++|.... .+++..++.++.|
T Consensus 42 ~~~~e~~~l~~l~h~~iv~~~~~~~--~~---------------~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~q 103 (257)
T cd05060 42 EFLREASVMAQLDHPCIVRLIGVCK--GE---------------PLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQ 103 (257)
T ss_pred HHHHHHHHHHhcCCCCeeeEEEEEc--CC---------------ceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHH
Confidence 3444556677778998888765432 11 1257999999999999998776 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||.+||+||||||+|||++.++.+||+|||+++.......
T Consensus 104 i~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~--------------------------------- 150 (257)
T cd05060 104 VAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD--------------------------------- 150 (257)
T ss_pred HHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCc---------------------------------
Confidence 99999999999999999999999999999999999999874330000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. ........++..
T Consensus 151 --------------------~-----------------------------------------------~~~~~~~~~~~~ 163 (257)
T cd05060 151 --------------------Y-----------------------------------------------YRATTAGRWPLK 163 (257)
T ss_pred --------------------c-----------------------------------------------cccccCcccccc
Confidence 0 000011223457
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.+..++.++|||||||++|||++ |..||... ......+......+......+.+.+|+.+||.++|++||
T Consensus 164 y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 243 (257)
T cd05060 164 WYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRP 243 (257)
T ss_pred ccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCc
Confidence 999999998889999999999999999998 88887432 122333333332233334457789999999999999999
Q ss_pred ChhHHhh
Q 002843 575 TTREILQ 581 (874)
Q Consensus 575 Ta~EiL~ 581 (874)
++.++++
T Consensus 244 ~~~~l~~ 250 (257)
T cd05060 244 TFSELES 250 (257)
T ss_pred CHHHHHH
Confidence 9999865
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=257.20 Aligned_cols=199 Identities=15% Similarity=0.133 Sum_probs=151.9
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..+++...||+++.+...... .. .+++|||++|++|.+++......+++..++.++.
T Consensus 46 ~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 108 (259)
T cd05037 46 LAFFETASLMSQLSHKHLVKLYGVCVR-DE----------------NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAK 108 (259)
T ss_pred HHHHHHHHHHHcCCCcchhheeeEEec-CC----------------cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHH
Confidence 344555567788889998888776543 11 2579999999999999987654799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCC-------cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccc
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSN-------QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGI 409 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~-------~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~ 409 (874)
||+.||+|||++||+||||||+|||++.++ .+|++|||+++.....
T Consensus 109 ~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~--------------------------- 161 (259)
T cd05037 109 QLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR--------------------------- 161 (259)
T ss_pred HHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccccccc---------------------------
Confidence 999999999999999999999999999887 7999999987632200
Q ss_pred hhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccc
Q 002843 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSV 489 (874)
Q Consensus 410 ~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~ 489 (874)
T Consensus 162 -------------------------------------------------------------------------------- 161 (259)
T cd05037 162 -------------------------------------------------------------------------------- 161 (259)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccCcccccCC--CCCCccchhHHHHHHHHhcC-CCCchHHHHH--HHHHhhcCCCCCCCCCCCHHHHHHHHH
Q 002843 490 SEQLEEKWYASPEELSGG--VCTTSSNIYSLGVLFFELFG-RFDSERALAA--AMSDLRDRILPPSFLSENPKEAGFCLW 564 (874)
Q Consensus 490 t~~~GT~~Y~APEvl~g~--~ys~kSDIwSLGVIL~ELlt-G~~p~~~~~~--~~~~l~~~~lpp~~~~~~p~l~dLi~~ 564 (874)
....++..|+|||++.+. .++.++|||||||++|||++ |..|+..... ........... .......+.+|+.+
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~ 239 (259)
T cd05037 162 EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHRL--PMPDCAELANLINQ 239 (259)
T ss_pred cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCCCC--CCCCchHHHHHHHH
Confidence 112345579999999876 68999999999999999999 4666643311 11111111111 11122678899999
Q ss_pred ccccCCCCCCChhHHhh
Q 002843 565 QLHPEPLSRPTTREILQ 581 (874)
Q Consensus 565 cL~~dP~~RPTa~EiL~ 581 (874)
||..+|.+||++.++++
T Consensus 240 ~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 240 CWTYDPTKRPSFRAILR 256 (259)
T ss_pred HhccChhhCCCHHHHHH
Confidence 99999999999999976
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-28 Score=256.78 Aligned_cols=205 Identities=20% Similarity=0.171 Sum_probs=161.1
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh-CCCCCCHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFR 336 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~-~~~~lse~e~~~I~~ 336 (874)
....+...++...|++++.+......++.. +++|||++|++|.+++.. .+..+++..++.++.
T Consensus 44 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 107 (255)
T cd08219 44 DSRKEAVLLAKMKHPNIVAFKESFEADGHL----------------YIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFV 107 (255)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEEECCEE----------------EEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHH
Confidence 334455667777899998888776544432 469999999999999965 344689999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+|+||||+||+++.++.++++|||+++......
T Consensus 108 ~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--------------------------------- 154 (255)
T cd08219 108 QMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG--------------------------------- 154 (255)
T ss_pred HHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc---------------------------------
Confidence 99999999999999999999999999999999999999876322000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......|++
T Consensus 155 ----------------------------------------------------------------------~~~~~~~~~~ 164 (255)
T cd08219 155 ----------------------------------------------------------------------AYACTYVGTP 164 (255)
T ss_pred ----------------------------------------------------------------------cccccccCCc
Confidence 0001345778
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
.|+|||++.+..++.++|||||||++|+|++|..||.... .....+.....++........+.+|+.+||..||++||
T Consensus 165 ~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 244 (255)
T cd08219 165 YYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRP 244 (255)
T ss_pred cccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCC
Confidence 9999999998889999999999999999999999985322 22334444444333334456789999999999999999
Q ss_pred ChhHHhh
Q 002843 575 TTREILQ 581 (874)
Q Consensus 575 Ta~EiL~ 581 (874)
++.+++.
T Consensus 245 ~~~~il~ 251 (255)
T cd08219 245 SATTILS 251 (255)
T ss_pred CHHHHhh
Confidence 9999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-28 Score=259.79 Aligned_cols=207 Identities=13% Similarity=0.105 Sum_probs=154.3
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC------CCCCHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------HKGKRIECL 332 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~------~~lse~e~~ 332 (874)
...+...+....|++++.++.....+.. .+++|||++|++|.+++.... ..+++..++
T Consensus 56 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~ 119 (277)
T cd05036 56 FLMEALIMSKFNHQNIVRLIGVSFERLP----------------RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLL 119 (277)
T ss_pred HHHHHHHHHhCCCCCEeeEEEEEccCCC----------------cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHH
Confidence 3445567777889988888776443222 357999999999999997643 158999999
Q ss_pred HHHHHHHHHHHHHHHCCCcccCCCCCceEEecCC---cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccc
Q 002843 333 YIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN---QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGI 409 (874)
Q Consensus 333 ~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~---~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~ 409 (874)
.++.||+.||.|||+++|+||||||+|||++.++ .+|++|||+++.+.....
T Consensus 120 ~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~------------------------- 174 (277)
T cd05036 120 FCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASY------------------------- 174 (277)
T ss_pred HHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccc-------------------------
Confidence 9999999999999999999999999999998764 599999999874320000
Q ss_pred hhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccc
Q 002843 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSV 489 (874)
Q Consensus 410 ~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~ 489 (874)
. ...
T Consensus 175 --------------------------------~--------------------------------------------~~~ 178 (277)
T cd05036 175 --------------------------------Y--------------------------------------------RKG 178 (277)
T ss_pred --------------------------------e--------------------------------------------ecC
Confidence 0 000
Q ss_pred ccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHcc
Q 002843 490 SEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 490 t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL 566 (874)
.....+..|+|||++.+..++.++|||||||++|||++ |..||... ...+..+.....++......+.+.+|+.+||
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 258 (277)
T cd05036 179 GRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCW 258 (277)
T ss_pred CCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence 11223457999999998889999999999999999997 88887431 1222222222112222334567899999999
Q ss_pred ccCCCCCCChhHHhhh
Q 002843 567 HPEPLSRPTTREILQS 582 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~h 582 (874)
..+|++||++.++|+|
T Consensus 259 ~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 259 QHTPEDRPNFATILER 274 (277)
T ss_pred CCCcccCcCHHHHHHH
Confidence 9999999999999886
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-28 Score=261.09 Aligned_cols=210 Identities=14% Similarity=0.111 Sum_probs=153.6
Q ss_pred HHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHHHHHH
Q 002843 262 GAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQ 337 (874)
Q Consensus 262 ~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I~~Q 337 (874)
+..++... .||+++.+........... ....+++|||++|++|.+++.. .+..+++..+..++.|
T Consensus 64 e~~~l~~l~~h~~i~~~~~~~~~~~~~~-----------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~ 132 (286)
T cd06638 64 EYNILKALSDHPNVVKFYGMYYKKDVKN-----------GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHE 132 (286)
T ss_pred HHHHHHHHhcCCCeeeeeeeeeecccCC-----------CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHH
Confidence 33444444 6998888876543111100 0013689999999999999863 2336899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||+++|+||||||+||+++.++.+|++|||+++.+....
T Consensus 133 i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------------------------- 178 (286)
T cd06638 133 ALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR---------------------------------- 178 (286)
T ss_pred HHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCC----------------------------------
Confidence 9999999999999999999999999999999999999876322000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......|++.
T Consensus 179 ---------------------------------------------------------------------~~~~~~~~~~~ 189 (286)
T cd06638 179 ---------------------------------------------------------------------LRRNTSVGTPF 189 (286)
T ss_pred ---------------------------------------------------------------------CccccccCCCc
Confidence 00013357889
Q ss_pred ccCcccccC-----CCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCCC-C-CCCHHHHHHHHHcccc
Q 002843 498 YASPEELSG-----GVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPSF-L-SENPKEAGFCLWQLHP 568 (874)
Q Consensus 498 Y~APEvl~g-----~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~~-~-~~~p~l~dLi~~cL~~ 568 (874)
|+|||++.. ..++.++|||||||++|||++|..|+..... .+..+.....+... . .....+.+|+.+||+.
T Consensus 190 y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 269 (286)
T cd06638 190 WMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTK 269 (286)
T ss_pred ccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccC
Confidence 999999853 3478999999999999999999988743321 11122111111111 1 1235689999999999
Q ss_pred CCCCCCChhHHhhhHHH
Q 002843 569 EPLSRPTTREILQSEVT 585 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~ 585 (874)
+|++||++.|+|+|+||
T Consensus 270 ~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 270 DYEKRPTVSDLLQHVFI 286 (286)
T ss_pred CcccCCCHHHHhhcccC
Confidence 99999999999999996
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-28 Score=262.83 Aligned_cols=203 Identities=15% Similarity=0.074 Sum_probs=153.6
Q ss_pred HHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------------
Q 002843 260 AAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--------------- 323 (874)
Q Consensus 260 ~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~--------------- 323 (874)
..+...+... .||+++.+......++.. +++|||+++++|.+++....
T Consensus 50 ~~E~~~l~~l~~hp~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 113 (297)
T cd05089 50 AGELEVLCKLGHHPNIINLLGACENRGYL----------------YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTA 113 (297)
T ss_pred HHHHHHHHhhcCCCchhheEEEEccCCcc----------------eEEEEecCCCcHHHHHHhccccccccccccccCcc
Confidence 3343444444 689988887765543332 56999999999999997532
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhh
Q 002843 324 HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEE 403 (874)
Q Consensus 324 ~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~ 403 (874)
..+++..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 114 ~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--------------------- 172 (297)
T cd05089 114 STLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY--------------------- 172 (297)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce---------------------
Confidence 25889999999999999999999999999999999999999999999999987521100
Q ss_pred hccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccc
Q 002843 404 MFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQ 483 (874)
Q Consensus 404 dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~ 483 (874)
..
T Consensus 173 -------------------------------------~~----------------------------------------- 174 (297)
T cd05089 173 -------------------------------------VK----------------------------------------- 174 (297)
T ss_pred -------------------------------------ec-----------------------------------------
Confidence 00
Q ss_pred ccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHH
Q 002843 484 QQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAG 560 (874)
Q Consensus 484 ~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~d 560 (874)
......+..|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....++......+.+.+
T Consensus 175 -----~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (297)
T cd05089 175 -----KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYE 249 (297)
T ss_pred -----cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHH
Confidence 001112346999999988889999999999999999997 8888732 22233344444333333345678999
Q ss_pred HHHHccccCCCCCCChhHHhhh
Q 002843 561 FCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 561 Li~~cL~~dP~~RPTa~EiL~h 582 (874)
|+.+||..+|.+||++.++++.
T Consensus 250 li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 250 LMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred HHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-28 Score=259.62 Aligned_cols=207 Identities=18% Similarity=0.123 Sum_probs=153.6
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...+....||+++.+.......... ..+++|||+++++|.+++... .+++.+++.|+.||
T Consensus 53 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~--------------~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l 116 (283)
T cd05080 53 WKKEINILKTLYHENIVKYKGCCSEQGGK--------------GLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQI 116 (283)
T ss_pred HHHHHHHHHhCCCCCEeeEEEEEecCCCc--------------eEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHH
Confidence 34455677888899988877654322221 125799999999999999775 59999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 117 ~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------- 162 (283)
T cd05080 117 CEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE---------------------------------- 162 (283)
T ss_pred HHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcch----------------------------------
Confidence 9999999999999999999999999999999999999864330000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.. .+ .....++..|
T Consensus 163 ---------------------~~---~~------------------------------------------~~~~~~~~~~ 176 (283)
T cd05080 163 ---------------------YY---RV------------------------------------------REDGDSPVFW 176 (283)
T ss_pred ---------------------hh---cc------------------------------------------CCCCCCCcee
Confidence 00 00 0112334579
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHH-----------------hhcCCCCCCCCCCCHHHHHH
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSD-----------------LRDRILPPSFLSENPKEAGF 561 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~-----------------l~~~~lpp~~~~~~p~l~dL 561 (874)
+|||.+.+..++.++|||||||++|||++|..|+......+.. +.....++........+.+|
T Consensus 177 ~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 256 (283)
T cd05080 177 YAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYIL 256 (283)
T ss_pred eCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHH
Confidence 9999998888999999999999999999998776321111110 11111112122334678999
Q ss_pred HHHccccCCCCCCChhHHhh
Q 002843 562 CLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 562 i~~cL~~dP~~RPTa~EiL~ 581 (874)
+..||.++|++|||+.++++
T Consensus 257 i~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 257 MKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred HHHHhccChhhCCCHHHHHH
Confidence 99999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-28 Score=259.74 Aligned_cols=201 Identities=17% Similarity=0.235 Sum_probs=148.5
Q ss_pred HHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHH
Q 002843 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (874)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~y 344 (874)
+.+...|++++.+......+.... .+++|||++ ++|.+++......+++.+++.++.||+.||.|
T Consensus 51 l~~l~~h~~i~~~~~~~~~~~~~~--------------~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~ 115 (282)
T cd07831 51 LRRLSPHPNILRLIEVLFDRKTGR--------------LALVFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDH 115 (282)
T ss_pred HhhcCCCCCccceEEEEecCCCCc--------------EEEEEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 333445888888776654331111 257999998 58999887754479999999999999999999
Q ss_pred HHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccc
Q 002843 345 HHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (874)
Q Consensus 345 LHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~ 424 (874)
||+.||+||||||+||+++. +.+||+|||+++.+...
T Consensus 116 LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~------------------------------------------ 152 (282)
T cd07831 116 MHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK------------------------------------------ 152 (282)
T ss_pred HHHCCceecccCHHHEEEcC-CCeEEEecccccccccC------------------------------------------
Confidence 99999999999999999999 99999999988633200
Q ss_pred cccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccc
Q 002843 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (874)
Q Consensus 425 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl 504 (874)
.......++..|+|||++
T Consensus 153 --------------------------------------------------------------~~~~~~~~~~~y~aPE~~ 170 (282)
T cd07831 153 --------------------------------------------------------------PPYTEYISTRWYRAPECL 170 (282)
T ss_pred --------------------------------------------------------------CCcCCCCCCcccCChhHh
Confidence 000123567899999987
Q ss_pred cC-CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc----------------C----CCCCC--------CCC
Q 002843 505 SG-GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD----------------R----ILPPS--------FLS 553 (874)
Q Consensus 505 ~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~----------------~----~lpp~--------~~~ 553 (874)
.. ..++.++|||||||++|||++|.+||.... .....+.. . ..+.. ...
T Consensus 171 ~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (282)
T cd07831 171 LTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPN 250 (282)
T ss_pred hcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHccc
Confidence 55 457899999999999999999988873211 00111100 0 00110 112
Q ss_pred CCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 554 ENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 554 ~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
.+..+.+||.+||+++|++||++.++|+||||
T Consensus 251 ~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 251 ASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 34678999999999999999999999999997
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-28 Score=259.79 Aligned_cols=206 Identities=17% Similarity=0.205 Sum_probs=162.1
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+...+....||+++.+......+.. .+++|||++|++|.+++... .+++..+..++.||+.
T Consensus 51 ~e~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~ 112 (277)
T cd06641 51 QEITVLSQCDSPYVTKYYGSYLKDTK----------------LWIIMEYLGGGSALDLLEPG--PLDETQIATILREILK 112 (277)
T ss_pred HHHHHHHhcCCCCEeEEEEEEEeCCe----------------EEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHH
Confidence 34456677789998888776554333 25699999999999999764 6999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||.|||+.||+|+||||+||+++.++.++++|||+++.+...
T Consensus 113 ~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~-------------------------------------- 154 (277)
T cd06641 113 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-------------------------------------- 154 (277)
T ss_pred HHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccc--------------------------------------
Confidence 999999999999999999999999999999999987632200
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
. .......++.+|+|
T Consensus 155 ---------------------~--------------------------------------------~~~~~~~~~~~y~~ 169 (277)
T cd06641 155 ---------------------Q--------------------------------------------IKRNTFVGTPFWMA 169 (277)
T ss_pred ---------------------h--------------------------------------------hhhccccCCccccC
Confidence 0 00012356789999
Q ss_pred cccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCCCC-CCCHHHHHHHHHccccCCCCCCChh
Q 002843 501 PEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSRPTTR 577 (874)
Q Consensus 501 PEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~~~-~~~p~l~dLi~~cL~~dP~~RPTa~ 577 (874)
||.+.+..++.++|+|||||++|+|++|..|+..... ....+.... ++.+. .....+.+++.+||+.+|.+||++.
T Consensus 170 PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~ 248 (277)
T cd06641 170 PEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAK 248 (277)
T ss_pred hhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC-CCCCCcccCHHHHHHHHHHccCChhhCcCHH
Confidence 9999888889999999999999999999999853321 122222222 22222 3346789999999999999999999
Q ss_pred HHhhhHHHHhh
Q 002843 578 EILQSEVTNEF 588 (874)
Q Consensus 578 EiL~hp~~~~~ 588 (874)
++++||||...
T Consensus 249 ~~l~~~~~~~~ 259 (277)
T cd06641 249 ELLKHKFIVRF 259 (277)
T ss_pred HHHhCHHHhhh
Confidence 99999999874
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-28 Score=256.69 Aligned_cols=209 Identities=12% Similarity=0.108 Sum_probs=160.0
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....|++++.+......... .+++|||+++++|.+++......+++.+++.++.|
T Consensus 52 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 115 (268)
T cd05063 52 DFLSEASIMGQFSHHNIIRLEGVVTKFKP----------------AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRG 115 (268)
T ss_pred HHHHHHHHHhcCCCCCeeEEEEEEccCCC----------------cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHH
Confidence 34555567788889998887766543322 25699999999999999876557999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
++.||+|||+.||+||||||+||+++.++.+|++|||++........
T Consensus 116 l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~--------------------------------- 162 (268)
T cd05063 116 IAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE--------------------------------- 162 (268)
T ss_pred HHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccc---------------------------------
Confidence 99999999999999999999999999999999999998764320000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.. ........+..
T Consensus 163 -----------------------~~--------------------------------------------~~~~~~~~~~~ 175 (268)
T cd05063 163 -----------------------GT--------------------------------------------YTTSGGKIPIR 175 (268)
T ss_pred -----------------------cc--------------------------------------------eeccCCCcCce
Confidence 00 00011122457
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||++.+..++.++|||||||++|||++ |..|+.. .......+......+........+.+|+.+||..+|++||
T Consensus 176 y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp 255 (268)
T cd05063 176 WTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRP 255 (268)
T ss_pred ecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCc
Confidence 999999998889999999999999999997 8888732 2223444444433344444567789999999999999999
Q ss_pred ChhHHhhh
Q 002843 575 TTREILQS 582 (874)
Q Consensus 575 Ta~EiL~h 582 (874)
++.++++.
T Consensus 256 ~~~~i~~~ 263 (268)
T cd05063 256 RFVDIVNL 263 (268)
T ss_pred CHHHHHHH
Confidence 99999753
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-28 Score=263.31 Aligned_cols=218 Identities=13% Similarity=0.116 Sum_probs=158.5
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..+++...||+++.+........... .......+++||||. ++|.+++......+++.+++.++.||+
T Consensus 59 ~~e~~~l~~l~h~~iv~~~~~~~~~~~~~--------~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~ 129 (310)
T cd07865 59 LREIKILQLLKHENVVNLIEICRTKATPY--------NRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLL 129 (310)
T ss_pred HHHHHHHHhCCCCCccceEEEEecccccc--------cCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 34556777888999988877544322211 011122478999997 589999977655799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||++||+|+||||+||+++.++.+||+|||++........
T Consensus 130 ~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~----------------------------------- 174 (310)
T cd07865 130 NGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKN----------------------------------- 174 (310)
T ss_pred HHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcc-----------------------------------
Confidence 999999999999999999999999999999999999864330000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.. .......+++..|+
T Consensus 175 --------------------~~--------------------------------------------~~~~~~~~~~~~y~ 190 (310)
T cd07865 175 --------------------SK--------------------------------------------PNRYTNRVVTLWYR 190 (310)
T ss_pred --------------------cC--------------------------------------------CCCccCcccCcccc
Confidence 00 00002345678999
Q ss_pred CcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHHH-----HHHHHhhcCCCCCC-----------------------
Q 002843 500 SPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERALA-----AAMSDLRDRILPPS----------------------- 550 (874)
Q Consensus 500 APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~~-----~~~~~l~~~~lpp~----------------------- 550 (874)
|||.+.+.. ++.++|||||||++|||++|.+|+.... ..+..+.....++.
T Consensus 191 aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (310)
T cd07865 191 PPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKV 270 (310)
T ss_pred CcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhh
Confidence 999987654 7899999999999999999988773211 11222221111000
Q ss_pred -----CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 551 -----FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 551 -----~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
.....+.+.+||.+||..||.+|||++|+|+||||
T Consensus 271 ~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 271 KERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred HHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 00123567799999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-28 Score=256.11 Aligned_cols=213 Identities=12% Similarity=0.016 Sum_probs=157.8
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-----CCCCCHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-----GHKGKRIECLY 333 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-----~~~lse~e~~~ 333 (874)
...+...+....|++++.++.......... .....+++|||+++|+|.+++... ...+++..++.
T Consensus 47 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----------~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 116 (272)
T cd05075 47 FLSEAVCMKEFDHPNVMRLIGVCLQTVESE----------GYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVK 116 (272)
T ss_pred HHHHHHHHHhCCCCCcceEEEEEccCCccc----------CCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHH
Confidence 444556677778999998876543211100 001136799999999999998431 22589999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 117 ~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------- 167 (272)
T cd05075 117 FMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDY----------------------------- 167 (272)
T ss_pred HHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccc-----------------------------
Confidence 999999999999999999999999999999999999999999874330000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
.. ......
T Consensus 168 -----------------------------------------------------------------~~-------~~~~~~ 175 (272)
T cd05075 168 -----------------------------------------------------------------YR-------QGRIAK 175 (272)
T ss_pred -----------------------------------------------------------------ee-------cCCccc
Confidence 00 001223
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCC
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP 570 (874)
+++.|+|||.+.+..++.++|||||||++|||++ |..||.. .......+.....++........+.+++.+||+++|
T Consensus 176 ~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 255 (272)
T cd05075 176 MPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNP 255 (272)
T ss_pred CCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence 4568999999998889999999999999999999 7777742 222334444443333333445678999999999999
Q ss_pred CCCCChhHHhhh
Q 002843 571 LSRPTTREILQS 582 (874)
Q Consensus 571 ~~RPTa~EiL~h 582 (874)
++|||+.++++.
T Consensus 256 ~~Rps~~~l~~~ 267 (272)
T cd05075 256 KDRPSFETLRCE 267 (272)
T ss_pred ccCcCHHHHHHH
Confidence 999999999765
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-28 Score=264.77 Aligned_cols=212 Identities=18% Similarity=0.172 Sum_probs=158.5
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..++....|++++.+........... .+++|||+++ +|.+++......+++.+++.++.||+
T Consensus 54 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~--------------~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~ 118 (309)
T cd07845 54 LREITLLLNLRHPNIVELKEVVVGKHLDS--------------IFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLL 118 (309)
T ss_pred hHHHHHHHhCCCCCCcceEEEEecCCCCe--------------EEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 34556777788999888877654322111 2579999984 89999987545799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||+.||+||||||+||+++.++.+||+|||+++......
T Consensus 119 ~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~------------------------------------ 162 (309)
T cd07845 119 RGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA------------------------------------ 162 (309)
T ss_pred HHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc------------------------------------
Confidence 99999999999999999999999999999999999886432000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
...+...+++.|+
T Consensus 163 -------------------------------------------------------------------~~~~~~~~~~~y~ 175 (309)
T cd07845 163 -------------------------------------------------------------------KPMTPKVVTLWYR 175 (309)
T ss_pred -------------------------------------------------------------------CCCCccccccccc
Confidence 0001234577899
Q ss_pred CcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhc---------------------CCCCCC-----
Q 002843 500 SPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRD---------------------RILPPS----- 550 (874)
Q Consensus 500 APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~---------------------~~lpp~----- 550 (874)
|||.+.+ ..++.++|||||||++|||++|.+||..... ....+.. ..++..
T Consensus 176 aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (309)
T cd07845 176 APELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNL 255 (309)
T ss_pred ChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCch
Confidence 9999876 4579999999999999999999988732111 1111111 000100
Q ss_pred ---CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 551 ---FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 551 ---~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+...++.+.+||.+||++||++|||+.++|.||||....
T Consensus 256 ~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 256 KHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred HHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence 112356688999999999999999999999999998543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-28 Score=263.75 Aligned_cols=220 Identities=16% Similarity=0.195 Sum_probs=160.8
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFR 336 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~ 336 (874)
....+...+....|++++.+......+.. .+++||||++++|.+++... ...+++..+..+++
T Consensus 45 ~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~----------------~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 108 (314)
T cd08216 45 LLQQEIITSRQLQHPNILPYVTSFIVDSE----------------LYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILK 108 (314)
T ss_pred HHHHHHHHHHhcCCcchhhhhheeecCCe----------------EEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHH
Confidence 34445566777789998888776543222 25699999999999999763 33689999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+||+++.++.+|++|||.+........ ..
T Consensus 109 ~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~-----------------------------~~- 158 (314)
T cd08216 109 DVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGK-----------------------------RQ- 158 (314)
T ss_pred HHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccc-----------------------------cc-
Confidence 999999999999999999999999999999999999998764330000 00
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
. .+ . .......++.
T Consensus 159 ------------------------~---~~--------------------------------~-------~~~~~~~~~~ 172 (314)
T cd08216 159 ------------------------R---VV--------------------------------H-------DFPKSSVKNL 172 (314)
T ss_pred ------------------------c---cc--------------------------------c-------cccccccccc
Confidence 0 00 0 0002345678
Q ss_pred cccCcccccCC--CCCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhcCC--------CCCCC------------
Q 002843 497 WYASPEELSGG--VCTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRDRI--------LPPSF------------ 551 (874)
Q Consensus 497 ~Y~APEvl~g~--~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~~~--------lpp~~------------ 551 (874)
.|+|||++.+. .|+.++|||||||++|||++|..||.... .....+.... .+...
T Consensus 173 ~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (314)
T cd08216 173 PWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEH 252 (314)
T ss_pred cccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccc
Confidence 99999998763 58899999999999999999999985322 1122221110 00000
Q ss_pred ------------CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 552 ------------LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 552 ------------~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
....+.+.+|+.+||..||++|||+.++|+||||+.++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 253 PNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred cchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 00113577999999999999999999999999999775
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-28 Score=264.94 Aligned_cols=229 Identities=13% Similarity=0.064 Sum_probs=166.9
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.++.....+.. .+++|||++|++|.+++...+ .+++..+..++.||
T Consensus 48 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i 110 (305)
T cd05609 48 VFVERDILTFAENPFVVSMFCSFETKRH----------------LCMVMEYVEGGDCATLLKNIG-ALPVDMARMYFAET 110 (305)
T ss_pred HHHHHHHHHhCCCCCeeeeEEEEecCCE----------------EEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 3445566777788988888766543332 257999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||+.||+||||||+||+++.++.+|++|||+++....+ . ....
T Consensus 111 ~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~-~-----------------------~~~~------- 159 (305)
T cd05609 111 VLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS-L-----------------------TTNL------- 159 (305)
T ss_pred HHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcC-c-----------------------cccc-------
Confidence 99999999999999999999999999999999999988632100 0 0000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
...... .+ . .........|+..|
T Consensus 160 ------------------~~~~~~-----------~~--------------------------~--~~~~~~~~~~~~~y 182 (305)
T cd05609 160 ------------------YEGHIE-----------KD--------------------------T--REFLDKQVCGTPEY 182 (305)
T ss_pred ------------------cccccc-----------cc--------------------------h--hhccccCCccCccc
Confidence 000000 00 0 00000234678899
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCC--CCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRI--LPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~--lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
+|||.+.+..++.++|||||||++|||++|..||.. ............ .+.......+.+.+||.+||+++|++||
T Consensus 183 ~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~ 262 (305)
T cd05609 183 IAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERL 262 (305)
T ss_pred cCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhcc
Confidence 999999888899999999999999999999988742 222233333322 2222223456789999999999999999
Q ss_pred C---hhHHhhhHHHHhhHhhh
Q 002843 575 T---TREILQSEVTNEFQEVC 592 (874)
Q Consensus 575 T---a~EiL~hp~~~~~~~~~ 592 (874)
+ +.++|+||||...+...
T Consensus 263 ~~~~~~~ll~~~~~~~~~~~~ 283 (305)
T cd05609 263 GTGGAFEVKQHRFFLGLDWNG 283 (305)
T ss_pred CccCHHHHHhCccccCCCHHH
Confidence 8 78999999997655444
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-28 Score=263.77 Aligned_cols=210 Identities=14% Similarity=0.102 Sum_probs=165.8
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..++....||+++.+......... .+++|||++|++|.+++...+ .+++..+..++.||+
T Consensus 49 ~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil 111 (290)
T cd05580 49 LNEKRILQSIRHPFLVNLYGSFQDDSN----------------LYLVMEYVPGGELFSHLRKSG-RFPEPVARFYAAQVV 111 (290)
T ss_pred HHHHHHHHhCCCCCccceeeEEEcCCe----------------EEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 344456777779998888776543322 256999999999999998875 799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||++||+|+||+|+|||++.++.+||+|||+++.....
T Consensus 112 ~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~------------------------------------- 154 (290)
T cd05580 112 LALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR------------------------------------- 154 (290)
T ss_pred HHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-------------------------------------
Confidence 9999999999999999999999999999999999987632200
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.....|++.|+
T Consensus 155 ---------------------------------------------------------------------~~~~~~~~~y~ 165 (290)
T cd05580 155 ---------------------------------------------------------------------TYTLCGTPEYL 165 (290)
T ss_pred ---------------------------------------------------------------------CCCCCCCcccc
Confidence 01235678999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC---
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP--- 574 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP--- 574 (874)
|||.+.+..++.++|||||||++|+|++|..|+.... .....+..... +......+.+.+++.+||..+|.+|+
T Consensus 166 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~R~~~~ 244 (290)
T cd05580 166 APEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKV-RFPSFFSPDAKDLIRNLLQVDLTKRLGNL 244 (290)
T ss_pred ChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc-cCCccCCHHHHHHHHHHccCCHHHccCcc
Confidence 9999988888999999999999999999999874322 12222222211 11122357789999999999999999
Q ss_pred --ChhHHhhhHHHHhhHhhhh
Q 002843 575 --TTREILQSEVTNEFQEVCA 593 (874)
Q Consensus 575 --Ta~EiL~hp~~~~~~~~~~ 593 (874)
+++|+++||||....+...
T Consensus 245 ~~~~~~l~~~~~~~~~~~~~~ 265 (290)
T cd05580 245 KNGVNDIKNHPWFAGIDWIAL 265 (290)
T ss_pred cCCHHHHHcCcccccCCHHHH
Confidence 8999999999988765543
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=269.41 Aligned_cols=219 Identities=17% Similarity=0.209 Sum_probs=159.6
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....|++++.+........... ....+++|||+. ++|.+++... .+++..++.++.||
T Consensus 50 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-----------~~~~~lv~e~~~-~~l~~~~~~~--~l~~~~~~~i~~ql 115 (336)
T cd07849 50 TLREIKILRRFKHENIIGILDIIRPPSFES-----------FNDVYIVQELME-TDLYKLIKTQ--HLSNDHIQYFLYQI 115 (336)
T ss_pred HHHHHHHHHhCCCCCcCchhheeecccccc-----------cceEEEEehhcc-cCHHHHHhcC--CCCHHHHHHHHHHH
Confidence 444556777777999888776543222111 011367999997 5899888654 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 116 ~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~---------------------------------- 161 (336)
T cd07849 116 LRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHD---------------------------------- 161 (336)
T ss_pred HHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccccc----------------------------------
Confidence 9999999999999999999999999999999999998863320000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.........||+.|
T Consensus 162 ------------------------------------------------------------------~~~~~~~~~~~~~y 175 (336)
T cd07849 162 ------------------------------------------------------------------HTGFLTEYVATRWY 175 (336)
T ss_pred ------------------------------------------------------------------ccCCcCCcCcCCCc
Confidence 00000234678899
Q ss_pred cCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH-----HHHHHhhcC-------------------CCC--C--
Q 002843 499 ASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA-----AAMSDLRDR-------------------ILP--P-- 549 (874)
Q Consensus 499 ~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~-----~~~~~l~~~-------------------~lp--p-- 549 (874)
+|||.+.+ ..++.++|||||||++|+|++|.+||.... ..+..+... ..+ +
T Consensus 176 ~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (336)
T cd07849 176 RAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKV 255 (336)
T ss_pred cChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcc
Confidence 99998765 458999999999999999999998873211 000000000 000 0
Q ss_pred ----CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 550 ----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 550 ----~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
.....++.+.+|+.+||+.+|++|||+.|+++||||+.....
T Consensus 256 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 256 PWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred cHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 012235668899999999999999999999999999977654
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-28 Score=260.19 Aligned_cols=206 Identities=20% Similarity=0.163 Sum_probs=157.4
Q ss_pred HhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHHHHHHHH
Q 002843 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I~~QIl 339 (874)
..+++...||+++.++.....++. .+++|||++ ++|.+++.. .+..+++..++.++.||+
T Consensus 51 ~~~~~~~~~~~iv~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~ 113 (283)
T cd06617 51 DISMRSVDCPYTVTFYGALFREGD----------------VWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIV 113 (283)
T ss_pred HHHHHHcCCCCeeeeeEEEecCCc----------------EEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence 345677788999888776553332 256999998 689888864 233699999999999999
Q ss_pred HHHHHHHHC-CCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 340 ALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 340 ~aL~yLHs~-gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
.||+|||++ +++||||||+|||++.++.+||+|||+++.+...
T Consensus 114 ~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~------------------------------------ 157 (283)
T cd06617 114 KALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS------------------------------------ 157 (283)
T ss_pred HHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc------------------------------------
Confidence 999999997 9999999999999999999999999987632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
...+...|+..|
T Consensus 158 --------------------------------------------------------------------~~~~~~~~~~~y 169 (283)
T cd06617 158 --------------------------------------------------------------------VAKTIDAGCKPY 169 (283)
T ss_pred --------------------------------------------------------------------cccccccCCccc
Confidence 000223567889
Q ss_pred cCcccccC----CCCCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhcCCCCCCC-CCCCHHHHHHHHHccccCC
Q 002843 499 ASPEELSG----GVCTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 499 ~APEvl~g----~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~~~lpp~~-~~~~p~l~dLi~~cL~~dP 570 (874)
+|||.+.+ ..++.++|||||||++|||++|..|+.... ..+........+... ...+..+.+|+.+||..+|
T Consensus 170 ~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 249 (283)
T cd06617 170 MAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNY 249 (283)
T ss_pred cChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCh
Confidence 99999865 347899999999999999999999885322 112222222222111 1234678999999999999
Q ss_pred CCCCChhHHhhhHHHHhhH
Q 002843 571 LSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 571 ~~RPTa~EiL~hp~~~~~~ 589 (874)
.+||++.++++||||....
T Consensus 250 ~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 250 KERPNYPELLQHPFFELHL 268 (283)
T ss_pred hhCcCHHHHhcCchhhhcc
Confidence 9999999999999999754
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-28 Score=261.23 Aligned_cols=207 Identities=17% Similarity=0.128 Sum_probs=157.0
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--------------
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-------------- 323 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-------------- 323 (874)
....+...+....||+++.+......++. .+++|||+.|++|.++|....
T Consensus 49 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 112 (290)
T cd05045 49 DLLSEFNLLKQVNHPHVIKLYGACSQDGP----------------LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRN 112 (290)
T ss_pred HHHHHHHHHhhCCCCCEeeEEEEEecCCC----------------cEEEEEecCCCCHHHHHHhcCCccccccccccccc
Confidence 34445567778889999888776553333 256999999999999986421
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhh
Q 002843 324 ---------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYR 394 (874)
Q Consensus 324 ---------~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~ 394 (874)
..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 113 ~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~---------- 182 (290)
T cd05045 113 SSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS---------- 182 (290)
T ss_pred cccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccc----------
Confidence 2578999999999999999999999999999999999999999999999999864320000
Q ss_pred hhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCC
Q 002843 395 LRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSS 474 (874)
Q Consensus 395 ~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~ 474 (874)
+
T Consensus 183 ---------------------------------------------------------------------------~---- 183 (290)
T cd05045 183 ---------------------------------------------------------------------------Y---- 183 (290)
T ss_pred ---------------------------------------------------------------------------h----
Confidence 0
Q ss_pred CCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCC
Q 002843 475 SPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSF 551 (874)
Q Consensus 475 ~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~ 551 (874)
.......++..|+|||.+.+..++.++|||||||++|||++ |..|+... ......+.....++..
T Consensus 184 ------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 251 (290)
T cd05045 184 ------------VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERP 251 (290)
T ss_pred ------------hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCC
Confidence 00011234567999999988889999999999999999998 88877432 2223333333333333
Q ss_pred CCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 552 ~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
......+.+|+.+||+++|++||++.+++.
T Consensus 252 ~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 252 ENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred CCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 344577999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-28 Score=255.12 Aligned_cols=207 Identities=19% Similarity=0.182 Sum_probs=159.6
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~Q 337 (874)
...+...++...||+++.+......+.. .+++|||++|++|.+++... +..+++..++.++.|
T Consensus 46 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T cd08220 46 AQNECQVLKLLSHPNIIEYYENFLEDKA----------------LMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQ 109 (256)
T ss_pred HHHHHHHHhhCCCCchhheeeeEecCCE----------------EEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHH
Confidence 3445567777788888877765443322 25799999999999999764 336899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecC-CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQS-NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~-~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
|+.||+|||++||+|+||||+||+++.+ +.+|++|||+++.....
T Consensus 110 i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~---------------------------------- 155 (256)
T cd08220 110 ILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK---------------------------------- 155 (256)
T ss_pred HHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC----------------------------------
Confidence 9999999999999999999999999865 45899999987632200
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......|+.
T Consensus 156 ----------------------------------------------------------------------~~~~~~~~~~ 165 (256)
T cd08220 156 ----------------------------------------------------------------------SKAYTVVGTP 165 (256)
T ss_pred ----------------------------------------------------------------------ccccccccCC
Confidence 0001235678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
.|+|||.+.+..++.++|||||||++|+|++|..|+.... .....+.....++......+.+.+++.+||+++|.+||
T Consensus 166 ~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp 245 (256)
T cd08220 166 CYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRP 245 (256)
T ss_pred cccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCC
Confidence 9999999998889999999999999999999988874322 12222222222222233567799999999999999999
Q ss_pred ChhHHhhhHHH
Q 002843 575 TTREILQSEVT 585 (874)
Q Consensus 575 Ta~EiL~hp~~ 585 (874)
|+.|+|+||||
T Consensus 246 t~~~ll~~p~~ 256 (256)
T cd08220 246 QLSQIMAQPIC 256 (256)
T ss_pred CHHHHhhCCCC
Confidence 99999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-28 Score=256.57 Aligned_cols=208 Identities=17% Similarity=0.167 Sum_probs=162.8
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~Q 337 (874)
...+...++...|++++.+......++. .+++|||+.|++|.+++... ...+++.+++.|+.|
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T cd08218 46 SRKEVAVLSNMKHPNIVQYQESFEENGN----------------LYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQ 109 (256)
T ss_pred HHHHHHHHHhCCCCCeeeeEeeecCCCe----------------EEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHH
Confidence 3444456777788988887766443322 25799999999999999764 336899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||++|++|+||+|+|||++.++.++++|||++.......
T Consensus 110 l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------------------------- 155 (256)
T cd08218 110 ICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV---------------------------------- 155 (256)
T ss_pred HHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch----------------------------------
Confidence 9999999999999999999999999999999999999876322000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......|++.
T Consensus 156 ---------------------------------------------------------------------~~~~~~~~~~~ 166 (256)
T cd08218 156 ---------------------------------------------------------------------ELARTCIGTPY 166 (256)
T ss_pred ---------------------------------------------------------------------hhhhhccCCcc
Confidence 00012346778
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
|+|||++.+..++.++|||||||++|+|++|..|+... ......+..+..++........+.++|.+||+.+|.+||+
T Consensus 167 ~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 246 (256)
T cd08218 167 YLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPS 246 (256)
T ss_pred ccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcC
Confidence 99999999888999999999999999999999887432 2223333334444444455677999999999999999999
Q ss_pred hhHHhhhHHH
Q 002843 576 TREILQSEVT 585 (874)
Q Consensus 576 a~EiL~hp~~ 585 (874)
+.++|+||||
T Consensus 247 ~~~vl~~~~~ 256 (256)
T cd08218 247 VNSILEKNFI 256 (256)
T ss_pred HHHHhhCcCC
Confidence 9999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=261.70 Aligned_cols=212 Identities=17% Similarity=0.201 Sum_probs=163.2
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQI 338 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QI 338 (874)
..+..++....||+++........++. .+++|||++|++|.+++.+.. ..+++.+++.++.||
T Consensus 41 ~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql 104 (277)
T cd05577 41 LNEKKILEKVSSRFIVSLAYAFETKDD----------------LCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQI 104 (277)
T ss_pred HHHHHHHHhCCCCCEeeeeeEEecCCe----------------EEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHH
Confidence 445566777778888887666543332 357999999999999997643 369999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||+.||+||||+|+||+++.++.++++|||++......
T Consensus 105 ~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~------------------------------------ 148 (277)
T cd05577 105 ICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG------------------------------------ 148 (277)
T ss_pred HHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC------------------------------------
Confidence 99999999999999999999999999999999999987632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......++..|
T Consensus 149 --------------------------------------------------------------------~~~~~~~~~~~y 160 (277)
T cd05577 149 --------------------------------------------------------------------KKIKGRAGTPGY 160 (277)
T ss_pred --------------------------------------------------------------------CccccccCCCCc
Confidence 000123456789
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCC--CCC-CCCCCHHHHHHHHHccccCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRIL--PPS-FLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~l--pp~-~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
+|||.+.+..++.++|||||||++|+|++|..||..... ....+..... +.. .....+.+.+||.+||+.+|.+|
T Consensus 161 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 240 (277)
T cd05577 161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKR 240 (277)
T ss_pred CCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHc
Confidence 999999988899999999999999999999999843221 1111222111 111 12346789999999999999999
Q ss_pred C-----ChhHHhhhHHHHhhHhh
Q 002843 574 P-----TTREILQSEVTNEFQEV 591 (874)
Q Consensus 574 P-----Ta~EiL~hp~~~~~~~~ 591 (874)
| ++.+++.||||..+...
T Consensus 241 ~~~~~~~~~~ll~h~~~~~~~~~ 263 (277)
T cd05577 241 LGCRGGSADEVREHPLFKDLNWR 263 (277)
T ss_pred cCCCcccHHHHHhChhhhcCChh
Confidence 9 88889999999876543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=259.42 Aligned_cols=213 Identities=18% Similarity=0.222 Sum_probs=160.7
Q ss_pred HHHHHhHHhhcCCCCCceeccceee-cCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC----CCCCCHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVS-NGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR----GHKGKRIECLY 333 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~----~~~lse~e~~~ 333 (874)
...+-+|++...||+.+.+...... +... .++.||.+ -+|.+.|+-+ .+.++...+..
T Consensus 74 AcREiaL~REl~h~nvi~Lv~Vfl~~d~~v----------------~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKs 136 (438)
T KOG0666|consen 74 ACREIALLRELKHPNVISLVKVFLSHDKKV----------------WLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKS 136 (438)
T ss_pred HHHHHHHHHHhcCCcchhHHHHHhccCceE----------------EEEehhhh-hhHHHHHHHhccchhccCCHHHHHH
Confidence 4556689999999999987666553 2222 45899999 5999999643 33799999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecC----CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccc
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS----NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGI 409 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~----~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~ 409 (874)
|+.||+.|+.|||++-|+||||||.|||+..+ |.|||+|||++|....+-
T Consensus 137 ilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~pl-------------------------- 190 (438)
T KOG0666|consen 137 ILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPL-------------------------- 190 (438)
T ss_pred HHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccc--------------------------
Confidence 99999999999999999999999999999987 999999999998655110
Q ss_pred hhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccc
Q 002843 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSV 489 (874)
Q Consensus 410 ~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~ 489 (874)
+++-+.
T Consensus 191 --------------------------------------------------------------------------kpl~s~ 196 (438)
T KOG0666|consen 191 --------------------------------------------------------------------------KPLASL 196 (438)
T ss_pred --------------------------------------------------------------------------cccccC
Confidence 011112
Q ss_pred ccccccccccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHHH---------------HHH--------------
Q 002843 490 SEQLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERALA---------------AAM-------------- 539 (874)
Q Consensus 490 t~~~GT~~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~~---------------~~~-------------- 539 (874)
...+-|.||+|||.+.|.. ||.+.||||+|||+.||++-.+-|.... ..+
T Consensus 197 d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~l 276 (438)
T KOG0666|consen 197 DPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDL 276 (438)
T ss_pred CceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhh
Confidence 4668899999999999965 9999999999999999999644331111 111
Q ss_pred ----------HHhhcCCCCCC--------CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 540 ----------SDLRDRILPPS--------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 540 ----------~~l~~~~lpp~--------~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
.+++.....+. ....++...+|+.+||.+||-+|+|+.++|+|+||.+.
T Consensus 277 kk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d 343 (438)
T KOG0666|consen 277 KKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTED 343 (438)
T ss_pred hhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence 11111111110 01123446799999999999999999999999999964
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-28 Score=254.76 Aligned_cols=235 Identities=14% Similarity=0.055 Sum_probs=170.5
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
|.|.||+|...+ ....+.+.+.............+...+....|++++.+.........
T Consensus 18 ~~~~vy~~~~~~------~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--------------- 76 (261)
T cd05148 18 YFGEVWEGLWKN------RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEP--------------- 76 (261)
T ss_pred CCccEEEeEecC------CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCC---------------
Confidence 567888876422 11112222222222233344455567777788888887665432221
Q ss_pred CCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 302 GGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
.+++|||+++++|.+++... +..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 77 -~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~ 155 (261)
T cd05148 77 -VYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIK 155 (261)
T ss_pred -eEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcC
Confidence 25799999999999999763 3468999999999999999999999999999999999999999999999999886332
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
+...
T Consensus 156 ~~~~---------------------------------------------------------------------------- 159 (261)
T cd05148 156 EDVY---------------------------------------------------------------------------- 159 (261)
T ss_pred Cccc----------------------------------------------------------------------------
Confidence 0000
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHH
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAA 537 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~ 537 (874)
+ .....++..|+|||.+.+..++.++|||||||++|+|++ |..|+.. ...
T Consensus 160 ------------------~---------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~ 212 (261)
T cd05148 160 ------------------L---------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE 212 (261)
T ss_pred ------------------c---------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence 0 011234567999999988889999999999999999998 7888743 222
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 538 AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 538 ~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
....+.....++......+.+.+++.+||..+|.+|||+.++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 213 VYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 33334444344444556678999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=256.83 Aligned_cols=208 Identities=14% Similarity=0.103 Sum_probs=159.7
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+......+.. .+++|||+.+++|.+++......+++.+++.++.
T Consensus 44 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~ 107 (256)
T cd05113 44 DEFIEEAKVMMKLSHEKLVQLYGVCTKQRP----------------IYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCK 107 (256)
T ss_pred HHHHHHHHHHhcCCCCCeeeEEEEEccCCC----------------cEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHH
Confidence 334556667777789998888765432221 2579999999999999987554799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||+.||+|+||||+||+++.++.+|++|||+++...+...
T Consensus 108 ~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-------------------------------- 155 (256)
T cd05113 108 DVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-------------------------------- 155 (256)
T ss_pred HHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCce--------------------------------
Confidence 999999999999999999999999999999999999998763220000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......++.
T Consensus 156 ----------------------------------------------------------------------~~~~~~~~~~ 165 (256)
T cd05113 156 ----------------------------------------------------------------------TSSVGSKFPV 165 (256)
T ss_pred ----------------------------------------------------------------------eecCCCccCh
Confidence 0001123456
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||.+.+..++.++|||||||++|||++ |..|+.. .......+.....++........+.+++.+||+++|.+|
T Consensus 166 ~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 245 (256)
T cd05113 166 RWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEER 245 (256)
T ss_pred hhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence 8999999998889999999999999999998 8888742 222333444433333333345778999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
|++.+|+.+
T Consensus 246 p~~~~ll~~ 254 (256)
T cd05113 246 PTFQQLLSS 254 (256)
T ss_pred CCHHHHHHh
Confidence 999999864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=259.34 Aligned_cols=192 Identities=17% Similarity=0.145 Sum_probs=149.5
Q ss_pred hcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002843 268 SNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT 347 (874)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs 347 (874)
...||+++.+......... .+++|||++|++|.+++.+.. .+++.++..++.||+.||+|||+
T Consensus 41 ~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~ 103 (237)
T cd05576 41 PHCVPNMVCLHKYIVSEDS----------------VFLVLQHAEGGKLWSHISKFL-NIPEECVKRWAAEMVVALDALHR 103 (237)
T ss_pred hcCCCceeehhhheecCCe----------------EEEEEecCCCCCHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 3457777777665442221 357999999999999998765 69999999999999999999999
Q ss_pred CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccccc
Q 002843 348 QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427 (874)
Q Consensus 348 ~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~ 427 (874)
+||+||||||+||+++.++.++++|||++......
T Consensus 104 ~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~--------------------------------------------- 138 (237)
T cd05576 104 EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS--------------------------------------------- 138 (237)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEecccchhccccc---------------------------------------------
Confidence 99999999999999999999999999976532200
Q ss_pred ccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC
Q 002843 428 SLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG 507 (874)
Q Consensus 428 ~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~ 507 (874)
.....++..|+|||.+.+.
T Consensus 139 -------------------------------------------------------------~~~~~~~~~y~aPE~~~~~ 157 (237)
T cd05576 139 -------------------------------------------------------------CDGEAVENMYCAPEVGGIS 157 (237)
T ss_pred -------------------------------------------------------------cccCCcCccccCCcccCCC
Confidence 0112345679999999888
Q ss_pred CCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh-----hHHhhh
Q 002843 508 VCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQS 582 (874)
Q Consensus 508 ~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa-----~EiL~h 582 (874)
.++.++||||+||++|||++|..|+..............+|+ ...+.+.+||.+||+.||++||++ .+++.|
T Consensus 158 ~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 234 (237)
T cd05576 158 EETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTLNIPE---WVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSH 234 (237)
T ss_pred CCCchhhHHHHHHHHHHHHHCcchhhcCchhcccccccCCcc---cCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcC
Confidence 899999999999999999999887653221111111111221 235678999999999999999996 899999
Q ss_pred HHH
Q 002843 583 EVT 585 (874)
Q Consensus 583 p~~ 585 (874)
|||
T Consensus 235 ~~~ 237 (237)
T cd05576 235 PFF 237 (237)
T ss_pred CCC
Confidence 996
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-28 Score=261.51 Aligned_cols=210 Identities=16% Similarity=0.152 Sum_probs=155.3
Q ss_pred HHHHHh-HHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHH---h-CCCCCCHHHHHH
Q 002843 259 KAAGAM-MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLN---A-RGHKGKRIECLY 333 (874)
Q Consensus 259 ~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~---~-~~~~lse~e~~~ 333 (874)
...+.. +.+...|++++.++.....++. .+++|||+. ++|.++.. . ....+++..+..
T Consensus 49 ~~~e~~~l~~~~~~~~iv~~~~~~~~~~~----------------~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~ 111 (288)
T cd06616 49 LLMDLDVVMRSSDCPYIVKFYGALFREGD----------------CWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGK 111 (288)
T ss_pred HHHHHHHHHHhcCCCCEeeeeeEEecCCc----------------EEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHH
Confidence 333433 4444458998888776543322 246899987 46655432 1 223799999999
Q ss_pred HHHHHHHHHHHHHHC-CCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 334 IFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 334 I~~QIl~aL~yLHs~-gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....+.
T Consensus 112 i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----------------------------- 162 (288)
T cd06616 112 IAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI----------------------------- 162 (288)
T ss_pred HHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC-----------------------------
Confidence 999999999999985 99999999999999999999999999986432000
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
.....
T Consensus 163 ---------------------------------------------------------------------------~~~~~ 167 (288)
T cd06616 163 ---------------------------------------------------------------------------AKTRD 167 (288)
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 00123
Q ss_pred cccccccCcccccCC---CCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhc---CCC---CCC-CCCCCHHHHHHH
Q 002843 493 LEEKWYASPEELSGG---VCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRD---RIL---PPS-FLSENPKEAGFC 562 (874)
Q Consensus 493 ~GT~~Y~APEvl~g~---~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~---~~l---pp~-~~~~~p~l~dLi 562 (874)
.|++.|+|||++.+. .++.++|||||||++|||++|..||.........+.. ... +.. .....+.+.+|+
T Consensus 168 ~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 247 (288)
T cd06616 168 AGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFI 247 (288)
T ss_pred cCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHH
Confidence 567889999999876 5899999999999999999999998654332222222 111 111 122456789999
Q ss_pred HHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 563 LWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 563 ~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.+||+++|++|||+.+|+.||||+...
T Consensus 248 ~~~l~~~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 248 NLCLIKDESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred HHHccCChhhCcCHHHHhcChhhhchh
Confidence 999999999999999999999998754
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=252.30 Aligned_cols=207 Identities=14% Similarity=0.096 Sum_probs=158.2
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.+.+.....+. .+++|||++|++|.+++......+++..++.++.|
T Consensus 38 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 101 (250)
T cd05085 38 KFLSEARILKQYDHPNIVKLIGVCTQRQP----------------IYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALD 101 (250)
T ss_pred HHHHHHHHHHhCCCCCcCeEEEEEecCCc----------------cEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHH
Confidence 34455667777889998888776443222 25799999999999999775557899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||++|++||||||+||+++.++.+|++|||++......
T Consensus 102 i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~----------------------------------- 146 (250)
T cd05085 102 AAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG----------------------------------- 146 (250)
T ss_pred HHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccc-----------------------------------
Confidence 999999999999999999999999999999999999987532200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.. .......++..
T Consensus 147 -----------------------~~--------------------------------------------~~~~~~~~~~~ 159 (250)
T cd05085 147 -----------------------IY--------------------------------------------SSSGLKQIPIK 159 (250)
T ss_pred -----------------------cc--------------------------------------------ccCCCCCCccc
Confidence 00 00011123457
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||++.+..++.++|||||||++|||++ |..||... ......+...............+.+|+.+||..+|++||
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 239 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRP 239 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCC
Confidence 999999998889999999999999999998 88887322 222333333333333334557899999999999999999
Q ss_pred ChhHHhhh
Q 002843 575 TTREILQS 582 (874)
Q Consensus 575 Ta~EiL~h 582 (874)
++.++++.
T Consensus 240 ~~~~l~~~ 247 (250)
T cd05085 240 KFSELQKE 247 (250)
T ss_pred CHHHHHHH
Confidence 99998763
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-28 Score=262.58 Aligned_cols=206 Identities=16% Similarity=0.197 Sum_probs=153.5
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..++....|++++.+.+....+.. .+++|||+. ++|.+++......+++.++..++.||+
T Consensus 51 ~~e~~~l~~l~h~ni~~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~ 113 (291)
T cd07870 51 IREASLLKGLKHANIVLLHDIIHTKET----------------LTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLL 113 (291)
T ss_pred HHHHHHHHhcCCCCEeEEEEEEecCCe----------------EEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 345556777789998877766543222 257999996 788888866544689999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||+.||+|+||||+|||++.++.+||+|||+++.....
T Consensus 114 ~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~------------------------------------- 156 (291)
T cd07870 114 RGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIP------------------------------------- 156 (291)
T ss_pred HHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCC-------------------------------------
Confidence 9999999999999999999999999999999999987632200
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
. .......+++.|+
T Consensus 157 ----------------------~--------------------------------------------~~~~~~~~~~~y~ 170 (291)
T cd07870 157 ----------------------S--------------------------------------------QTYSSEVVTLWYR 170 (291)
T ss_pred ----------------------C--------------------------------------------CCCCCcccccccc
Confidence 0 0001234678999
Q ss_pred CcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHHH---HHHhhc---------------------CCC----CCC
Q 002843 500 SPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAAA---MSDLRD---------------------RIL----PPS 550 (874)
Q Consensus 500 APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~---~~~l~~---------------------~~l----pp~ 550 (874)
|||.+.+. .++.++|||||||++|||++|..||...... +..... ... +..
T Consensus 171 aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (291)
T cd07870 171 PPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQ 250 (291)
T ss_pred CCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcc
Confidence 99998764 4789999999999999999999887432211 111100 000 000
Q ss_pred ------CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 551 ------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 551 ------~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
-....+.+.+|+.+||..||++|||+.|+|.||||
T Consensus 251 ~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 251 LRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 01224568899999999999999999999999997
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=258.27 Aligned_cols=207 Identities=18% Similarity=0.180 Sum_probs=158.6
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+..++....||+++.+......... ..++|||++|++|.+++...+ .+++..+..++.||+.
T Consensus 57 ~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~ 119 (272)
T cd06629 57 SEIETLKDLDHLNIVQYLGFETTEEY----------------LSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLE 119 (272)
T ss_pred HHHHHHHhcCCCCcceEEEEeccCCc----------------eEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHH
Confidence 34456777788888877665443222 256999999999999998875 7999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||.|||++|++||||+|+||+++.++.++++|||+++.......
T Consensus 120 ~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~------------------------------------ 163 (272)
T cd06629 120 GLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYD------------------------------------ 163 (272)
T ss_pred HHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccccc------------------------------------
Confidence 99999999999999999999999999999999998763220000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
. .......|+..|+|
T Consensus 164 ---------------------------------------------------~--------------~~~~~~~~~~~y~~ 178 (272)
T cd06629 164 ---------------------------------------------------N--------------DQNMSMQGSVFWMA 178 (272)
T ss_pred ---------------------------------------------------c--------------cccccccCCccccC
Confidence 0 00023457789999
Q ss_pred cccccCCC--CCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhc----CCCCCCC-CCCCHHHHHHHHHccccCCC
Q 002843 501 PEELSGGV--CTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRD----RILPPSF-LSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 501 PEvl~g~~--ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~----~~lpp~~-~~~~p~l~dLi~~cL~~dP~ 571 (874)
||.+.... ++.++|+|||||++|||++|..|+..... .+..+.. ..+++.. ......+.+|+.+||+++|.
T Consensus 179 PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 258 (272)
T cd06629 179 PEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPD 258 (272)
T ss_pred HHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChh
Confidence 99988754 78999999999999999999998743221 1222221 1222222 23346789999999999999
Q ss_pred CCCChhHHhhhHHH
Q 002843 572 SRPTTREILQSEVT 585 (874)
Q Consensus 572 ~RPTa~EiL~hp~~ 585 (874)
.||++.++|+|||+
T Consensus 259 ~Rps~~~il~~~~~ 272 (272)
T cd06629 259 NRPTARELLQHPFI 272 (272)
T ss_pred hCCCHHHHhhCCCC
Confidence 99999999999996
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=264.81 Aligned_cols=207 Identities=17% Similarity=0.163 Sum_probs=156.5
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+..++....||+++.+......+.... .+++|||+++ +|.+++......+++.+++.++.||+.
T Consensus 53 ~e~~~l~~l~h~ni~~~~~~~~~~~~~~--------------~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~ 117 (293)
T cd07843 53 REINILLKLQHPNIVTVKEVVVGSNLDK--------------IYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLS 117 (293)
T ss_pred HHHHHHHhcCCCCEEEEEEEEEecCCCc--------------EEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 3445666777999998877655442111 3679999985 999999876547999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||+|||++||+|+||||+||+++.++.+||+|||+++......
T Consensus 118 aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~------------------------------------- 160 (293)
T cd07843 118 GVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL------------------------------------- 160 (293)
T ss_pred HHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc-------------------------------------
Confidence 9999999999999999999999999999999999886433000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
.......+++.|+|
T Consensus 161 ------------------------------------------------------------------~~~~~~~~~~~~~a 174 (293)
T cd07843 161 ------------------------------------------------------------------KPYTQLVVTLWYRA 174 (293)
T ss_pred ------------------------------------------------------------------cccccccccccccC
Confidence 00022356789999
Q ss_pred cccccCCC-CCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhc-----------------------------CCCC
Q 002843 501 PEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRD-----------------------------RILP 548 (874)
Q Consensus 501 PEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~-----------------------------~~lp 548 (874)
||.+.+.. ++.++|||||||++|||++|.+||..... .+..+.. ..+.
T Consensus 175 PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (293)
T cd07843 175 PELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLR 254 (293)
T ss_pred chhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhh
Confidence 99987654 68999999999999999999888742111 0111000 0011
Q ss_pred CCCCCC--CHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 549 PSFLSE--NPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 549 p~~~~~--~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
..+... .+.+.+|+.+||+.+|++|||+.|+|.||||
T Consensus 255 ~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 255 KKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred ccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 122222 5668899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=253.13 Aligned_cols=242 Identities=12% Similarity=0.026 Sum_probs=170.3
Q ss_pred CCceEEEecCCCCcccccccccccccccccCCC-hhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccc
Q 002843 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (874)
Q Consensus 221 kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (874)
.|.|+||+|...+. .-+....+.+.++.... ........+...+....||+++.+.+.... +
T Consensus 6 g~~~~v~~~~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~------------- 68 (257)
T cd05040 6 GSFGVVRRGEWSTS--GGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT--H------------- 68 (257)
T ss_pred cCcccEEeeeEecC--CCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC--C-------------
Confidence 46688888863110 00001122222233222 222334455567778889999888766442 1
Q ss_pred cCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchh
Q 002843 300 WIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (874)
Q Consensus 300 ~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~ 378 (874)
..+++|||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.
T Consensus 69 --~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~ 146 (257)
T cd05040 69 --PLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRA 146 (257)
T ss_pred --eEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccc
Confidence 1257999999999999998754 4789999999999999999999999999999999999999999999999999874
Q ss_pred ccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCC
Q 002843 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (874)
Q Consensus 379 ~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~ 458 (874)
+..... ..
T Consensus 147 ~~~~~~-------------------------------------------------------~~----------------- 154 (257)
T cd05040 147 LPQNED-------------------------------------------------------HY----------------- 154 (257)
T ss_pred cccccc-------------------------------------------------------ce-----------------
Confidence 330000 00
Q ss_pred cccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--H
Q 002843 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--L 535 (874)
Q Consensus 459 ~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~ 535 (874)
.......++..|+|||.+.+..++.++|||||||++|||++ |..|+.. .
T Consensus 155 ----------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 206 (257)
T cd05040 155 ----------------------------VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG 206 (257)
T ss_pred ----------------------------ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH
Confidence 00012345678999999998889999999999999999998 9988732 1
Q ss_pred HHHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 536 AAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 536 ~~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
......+.. ....+........+.+++.+||..+|++||++.++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 207 SQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 112222222 2222222234467899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-28 Score=261.10 Aligned_cols=206 Identities=15% Similarity=0.098 Sum_probs=154.7
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC----------CCCCH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG----------HKGKR 328 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~----------~~lse 328 (874)
...+...+....||+++.+......++. .+++|||+.+++|.++|.... ..+++
T Consensus 66 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 129 (296)
T cd05051 66 FLKEVKILSRLSDPNIARLLGVCTVDPP----------------LCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSF 129 (296)
T ss_pred HHHHHHHHHhcCCCCEeEEEEEEecCCC----------------cEEEEecCCCCCHHHHHHhcccccccccccCCCCCH
Confidence 4445667778889998887766543322 256999999999999997643 25899
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhcccc
Q 002843 329 IECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTG 408 (874)
Q Consensus 329 ~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~ 408 (874)
..++.++.||+.||+|||++||+||||||+||+++.++.++++|||+++.+.....
T Consensus 130 ~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~------------------------ 185 (296)
T cd05051 130 STLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDY------------------------ 185 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcc------------------------
Confidence 99999999999999999999999999999999999999999999998864320000
Q ss_pred chhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccc
Q 002843 409 IASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTS 488 (874)
Q Consensus 409 ~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~ 488 (874)
. ..
T Consensus 186 --------------------------------~---------------------------------------------~~ 188 (296)
T cd05051 186 --------------------------------Y---------------------------------------------RV 188 (296)
T ss_pred --------------------------------e---------------------------------------------ee
Confidence 0 00
Q ss_pred cccccccccccCcccccCCCCCCccchhHHHHHHHHhcC--CCCchHHH--HHHHHHhhc-------CCCCCCCCCCCHH
Q 002843 489 VSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG--RFDSERAL--AAAMSDLRD-------RILPPSFLSENPK 557 (874)
Q Consensus 489 ~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt--G~~p~~~~--~~~~~~l~~-------~~lpp~~~~~~p~ 557 (874)
.....++..|+|||.+.+..++.++|||||||++|||++ +..|+... ...+..+.. ....+........
T Consensus 189 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (296)
T cd05051 189 QGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKD 268 (296)
T ss_pred cCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHH
Confidence 023345678999999998889999999999999999998 55665321 112222221 1112222233467
Q ss_pred HHHHHHHccccCCCCCCChhHHhh
Q 002843 558 EAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 558 l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
+.+|+.+||..||++|||+.||++
T Consensus 269 l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 269 IYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHHHHHHhccChhcCCCHHHHHH
Confidence 999999999999999999999954
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-28 Score=274.89 Aligned_cols=156 Identities=15% Similarity=0.192 Sum_probs=121.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhh
Q 002843 325 KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEM 404 (874)
Q Consensus 325 ~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~d 404 (874)
.+++.+++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 233 ~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~-------------------- 292 (400)
T cd05105 233 GLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN-------------------- 292 (400)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccc--------------------
Confidence 478888999999999999999999999999999999999999999999999864320000
Q ss_pred ccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccc
Q 002843 405 FTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQ 484 (874)
Q Consensus 405 fg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~ 484 (874)
T Consensus 293 -------------------------------------------------------------------------------- 292 (400)
T cd05105 293 -------------------------------------------------------------------------------- 292 (400)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH---HHHHHHhhcCCCCCCCCCCCHHHHH
Q 002843 485 QSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL---AAAMSDLRDRILPPSFLSENPKEAG 560 (874)
Q Consensus 485 ~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~---~~~~~~l~~~~lpp~~~~~~p~l~d 560 (874)
........++..|+|||.+.+..++.++|||||||++|||++ |..|+... ......+.....++......+.+.+
T Consensus 293 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 371 (400)
T cd05105 293 -YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYD 371 (400)
T ss_pred -ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHH
Confidence 000023356678999999998889999999999999999996 87776432 2223344444333333344567899
Q ss_pred HHHHccccCCCCCCChhHHhh
Q 002843 561 FCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 561 Li~~cL~~dP~~RPTa~EiL~ 581 (874)
|+.+||..+|++||++.++.+
T Consensus 372 li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 372 IMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHHCccCHhHCcCHHHHHH
Confidence 999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.1e-28 Score=266.10 Aligned_cols=220 Identities=15% Similarity=0.086 Sum_probs=159.4
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQI 338 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QI 338 (874)
..+..++....||+++.+......... .+++|||+.+++|.+++.+.. ..+++..++.++.||
T Consensus 47 ~~e~~~~~~l~h~niv~~~~~~~~~~~----------------~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi 110 (328)
T cd08226 47 QNEVVLSHFFRHPNIMTSWTVFTTGSW----------------LWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGA 110 (328)
T ss_pred HHHHHHHHhCCCCCcceEeeeEecCCc----------------eEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHH
Confidence 334456666789999988777654333 256999999999999998642 259999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.++++||+.+........ .
T Consensus 111 ~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~----------------------~----------- 157 (328)
T cd08226 111 LRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ----------------------K----------- 157 (328)
T ss_pred HHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc----------------------c-----------
Confidence 9999999999999999999999999999999999976532210000 0
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
... .. ..| ....++..|
T Consensus 158 --------------------~~~-------------------------~~-----~~~-------------~~~~~~~~y 174 (328)
T cd08226 158 --------------------AKV-------------------------VY-----DFP-------------QFSTSVLPW 174 (328)
T ss_pred --------------------ccc-------------------------cc-----ccc-------------ccccCccCc
Confidence 000 00 000 012345679
Q ss_pred cCcccccCC--CCCCccchhHHHHHHHHhcCCCCchHHHHH---HHHHhhcCCCC-------------------------
Q 002843 499 ASPEELSGG--VCTTSSNIYSLGVLFFELFGRFDSERALAA---AMSDLRDRILP------------------------- 548 (874)
Q Consensus 499 ~APEvl~g~--~ys~kSDIwSLGVIL~ELltG~~p~~~~~~---~~~~l~~~~lp------------------------- 548 (874)
+|||++.+. .++.++|||||||++|||++|+.||..... ....+......
T Consensus 175 ~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (328)
T cd08226 175 LSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGI 254 (328)
T ss_pred cChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhccc
Confidence 999999874 478999999999999999999999853221 11111111000
Q ss_pred --------------------CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 549 --------------------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 549 --------------------p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
+......+.+.+|+.+||..||++|||+.|+|+||||+.+.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 255 GESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred ccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 0001123467899999999999999999999999999987764
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.6e-28 Score=261.57 Aligned_cols=207 Identities=17% Similarity=0.151 Sum_probs=156.4
Q ss_pred HHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--------------
Q 002843 259 KAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-------------- 323 (874)
Q Consensus 259 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-------------- 323 (874)
...+..++... .||+++.+......++.. +++|||+.+++|.++|....
T Consensus 67 ~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 130 (304)
T cd05101 67 LVSEMEMMKMIGKHKNIINLLGACTQDGPL----------------YVIVEYASKGNLREYLRARRPPGMEYSYDIARVP 130 (304)
T ss_pred HHHHHHHHHhhccCCCchheeEEEecCCce----------------EEEEecCCCCcHHHHHHhcCCcccccccccccCC
Confidence 34444455544 799988887765543322 46999999999999997642
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchh
Q 002843 324 -HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEE 402 (874)
Q Consensus 324 -~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei 402 (874)
..+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 131 ~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~------------------ 192 (304)
T cd05101 131 DEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDY------------------ 192 (304)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccc------------------
Confidence 2478889999999999999999999999999999999999999999999999874330000
Q ss_pred hhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccc
Q 002843 403 EMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTA 482 (874)
Q Consensus 403 ~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~ 482 (874)
.
T Consensus 193 ----------------------------------------------------------------------------~--- 193 (304)
T cd05101 193 ----------------------------------------------------------------------------Y--- 193 (304)
T ss_pred ----------------------------------------------------------------------------c---
Confidence 0
Q ss_pred cccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHH
Q 002843 483 QQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEA 559 (874)
Q Consensus 483 ~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~ 559 (874)
.......+++.|+|||++.+..++.++|||||||++|||++ |..|+.. .......+.....+.........+.
T Consensus 194 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (304)
T cd05101 194 ----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY 269 (304)
T ss_pred ----ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHH
Confidence 00012234568999999998889999999999999999998 6666632 2233444444433333334557789
Q ss_pred HHHHHccccCCCCCCChhHHhhh
Q 002843 560 GFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 560 dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+|+.+||+++|.+||++.|+++.
T Consensus 270 ~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 270 MMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHHcccChhhCCCHHHHHHH
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-28 Score=292.28 Aligned_cols=258 Identities=18% Similarity=0.205 Sum_probs=192.1
Q ss_pred ccccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccc-cccccccccccccCCChhHHHHHHHHhHHhhcCC
Q 002843 194 NMLSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKE-RRGMIDTKAFVTTTMPSDAALKAAGAMMVASNAS 271 (874)
Q Consensus 194 ~~~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~ 271 (874)
..+++..+.. ..|.++.| |+||+|.+.+..-. ..-+...|...+-....+......++.+++.-.|
T Consensus 687 p~v~~~~v~l~~~lG~G~F------------G~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~H 754 (1025)
T KOG1095|consen 687 PEVPRKNVTLLRVLGKGAF------------GEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDH 754 (1025)
T ss_pred ccCChhheEeeeeeccccc------------cceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC
Confidence 3444555555 66666655 66999987655552 2222223322222334455557888899999999
Q ss_pred CCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHH
Q 002843 272 PKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR------GHKGKRIECLYIFRQIVALVDYH 345 (874)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~------~~~lse~e~~~I~~QIl~aL~yL 345 (874)
||++..+......+.. .+++|||+||+|..||++. ...++..+.+.++.||+.|+.||
T Consensus 755 pNiv~liGv~l~~~~~----------------~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YL 818 (1025)
T KOG1095|consen 755 PNIVSLIGVCLDSGPP----------------LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYL 818 (1025)
T ss_pred cceeeEEEeecCCCCc----------------EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHH
Confidence 9999999887754433 4599999999999999886 55799999999999999999999
Q ss_pred HHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccc
Q 002843 346 HTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSR 425 (874)
Q Consensus 346 Hs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~ 425 (874)
+++++|||||...|+||+....+||+|||+||++.+..+ .
T Consensus 819 e~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~y---y------------------------------------- 858 (1025)
T KOG1095|consen 819 ESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDY---Y------------------------------------- 858 (1025)
T ss_pred HhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchh---e-------------------------------------
Confidence 999999999999999999999999999999997662211 0
Q ss_pred ccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccccc
Q 002843 426 WWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS 505 (874)
Q Consensus 426 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~ 505 (874)
..+ ...+-...|||||.+.
T Consensus 859 ---------------------------r~~----------------------------------~~a~lPvkWm~PEsl~ 877 (1025)
T KOG1095|consen 859 ---------------------------RKH----------------------------------GEAMLPVKWMPPESLK 877 (1025)
T ss_pred ---------------------------ecc----------------------------------CccccceecCCHHHHh
Confidence 000 0001124799999999
Q ss_pred CCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHH-HhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 506 GGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMS-DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 506 g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~-~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
.+.|+.|+|||||||+|||+++ |..|+... ...+. .+..+.+++ ......++.++|..||+.+|++||++..|++
T Consensus 878 d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~-P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 878 DGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDP-PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred hcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCC-CCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 9999999999999999999998 67777432 22344 344454432 2234456889999999999999999999987
|
|
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=263.06 Aligned_cols=206 Identities=16% Similarity=0.163 Sum_probs=155.9
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..++....||+++.+......+.. .+++|||+++++|.+++.... .+++.+++.++.||+
T Consensus 48 ~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~ 110 (286)
T cd07846 48 MREIRMLKQLRHENLVNLIEVFRRKKR----------------LYLVFEFVDHTVLDDLEKYPN-GLDESRVRKYLFQIL 110 (286)
T ss_pred HHHHHHHHhcCCcchhhHHHhcccCCe----------------EEEEEecCCccHHHHHHhccC-CCCHHHHHHHHHHHH
Confidence 345567777789988887766543332 257999999999998887654 599999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||+.||+|+||+|+||+++.++.++|+|||+++.+....
T Consensus 111 ~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~------------------------------------ 154 (286)
T cd07846 111 RGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG------------------------------------ 154 (286)
T ss_pred HHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc------------------------------------
Confidence 99999999999999999999999999999999999876322000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
...+...++.+|+
T Consensus 155 -------------------------------------------------------------------~~~~~~~~~~~y~ 167 (286)
T cd07846 155 -------------------------------------------------------------------EVYTDYVATRWYR 167 (286)
T ss_pred -------------------------------------------------------------------cccCcccceeecc
Confidence 0002345778999
Q ss_pred CcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhh--------------------cCC-CCC------
Q 002843 500 SPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLR--------------------DRI-LPP------ 549 (874)
Q Consensus 500 APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~--------------------~~~-lpp------ 549 (874)
|||++.+. .++.++|||||||++|||++|.+|+..... ....+. ... .+.
T Consensus 168 aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (286)
T cd07846 168 APELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEP 247 (286)
T ss_pred CcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcch
Confidence 99998764 478899999999999999999887732111 000000 000 000
Q ss_pred ---CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 550 ---SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 550 ---~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
.+......+.+|+.+||+++|++||++.++|+||||
T Consensus 248 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 248 LEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred HHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 112334668899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-28 Score=263.12 Aligned_cols=198 Identities=17% Similarity=0.121 Sum_probs=151.7
Q ss_pred HHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------------CCCCHH
Q 002843 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRI 329 (874)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---------------~~lse~ 329 (874)
+.....|++++.+......++.. +++|||++|++|.+++...+ ..+++.
T Consensus 61 l~~l~~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 124 (303)
T cd05088 61 LCKLGHHPNIINLLGACEHRGYL----------------YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 124 (303)
T ss_pred HHHhcCCCCcceEEEEECCCCCc----------------eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHH
Confidence 33334799998888776544432 46999999999999997542 258899
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccc
Q 002843 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGI 409 (874)
Q Consensus 330 e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~ 409 (874)
+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 125 ~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--------------------------- 177 (303)
T cd05088 125 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--------------------------- 177 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchh---------------------------
Confidence 99999999999999999999999999999999999999999999987521100
Q ss_pred hhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccc
Q 002843 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSV 489 (874)
Q Consensus 410 ~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~ 489 (874)
. ..
T Consensus 178 -------------------------------~----------------------------------------------~~ 180 (303)
T cd05088 178 -------------------------------V----------------------------------------------KK 180 (303)
T ss_pred -------------------------------h----------------------------------------------hc
Confidence 0 00
Q ss_pred ccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHcc
Q 002843 490 SEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 490 t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL 566 (874)
....++..|+|||.+.+..++.++|||||||++|||++ |..||... ......+.....++......+.+.+|+.+||
T Consensus 181 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 260 (303)
T cd05088 181 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCW 260 (303)
T ss_pred ccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHc
Confidence 01123457999999988889999999999999999998 88887422 2222333333222223344577899999999
Q ss_pred ccCCCCCCChhHHhhh
Q 002843 567 HPEPLSRPTTREILQS 582 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~h 582 (874)
..+|++||++.++|++
T Consensus 261 ~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 261 REKPYERPSFAQILVS 276 (303)
T ss_pred CCChhhCcCHHHHHHH
Confidence 9999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=257.59 Aligned_cols=208 Identities=16% Similarity=0.141 Sum_probs=155.1
Q ss_pred hHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC---CCCCCHHHHHHHHHHHH
Q 002843 264 MMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIV 339 (874)
Q Consensus 264 ~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~---~~~lse~e~~~I~~QIl 339 (874)
.++... .|++++.+........... -....+++|||+++++|.+++... +..+++..++.++.||+
T Consensus 54 ~~l~~~~~h~~i~~~~~~~~~~~~~~----------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~ 123 (275)
T cd06608 54 NILRKYSNHPNIATFYGAFIKKNPPG----------NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETL 123 (275)
T ss_pred HHHHHhcCCCChheEEEEEEecCCCC----------cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Confidence 344444 6899998877655333200 001136799999999999998652 34799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||++||+|+||+|+||+++.++.+||+|||++.......
T Consensus 124 ~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~------------------------------------ 167 (275)
T cd06608 124 RGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL------------------------------------ 167 (275)
T ss_pred HHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccch------------------------------------
Confidence 99999999999999999999999999999999999876322000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.......|+..|+
T Consensus 168 -------------------------------------------------------------------~~~~~~~~~~~y~ 180 (275)
T cd06608 168 -------------------------------------------------------------------GRRNTFIGTPYWM 180 (275)
T ss_pred -------------------------------------------------------------------hhhcCcccccccc
Confidence 0002345788999
Q ss_pred CcccccC-----CCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCCCC---CCCHHHHHHHHHccccC
Q 002843 500 SPEELSG-----GVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPSFL---SENPKEAGFCLWQLHPE 569 (874)
Q Consensus 500 APEvl~g-----~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~~~---~~~p~l~dLi~~cL~~d 569 (874)
|||++.. ..++.++|||||||+||+|++|..||..... ....+..... +... .....+.+|+.+||..|
T Consensus 181 aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~d 259 (275)
T cd06608 181 APEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPP-PTLKSPENWSKKFNDFISECLIKN 259 (275)
T ss_pred CHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCC-CCCCchhhcCHHHHHHHHHHhhcC
Confidence 9998864 2478899999999999999999999853221 1222222222 1221 12356889999999999
Q ss_pred CCCCCChhHHhhhHHH
Q 002843 570 PLSRPTTREILQSEVT 585 (874)
Q Consensus 570 P~~RPTa~EiL~hp~~ 585 (874)
|++|||+.++++|||+
T Consensus 260 p~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 260 YEQRPFMEELLEHPFI 275 (275)
T ss_pred hhhCcCHHHHhcCCCC
Confidence 9999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-28 Score=254.10 Aligned_cols=208 Identities=17% Similarity=0.140 Sum_probs=162.2
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~Q 337 (874)
...+...++...|++++.+......++. .+++|||++|++|.+++.... ..+++..++.|+.|
T Consensus 46 ~~~E~~~l~~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
T cd08225 46 SKKEVILLAKMKHPNIVTFFASFQENGR----------------LFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQ 109 (257)
T ss_pred HHHHHHHHHhCCCCChhhhhheeccCCe----------------EEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHH
Confidence 3445567777789988888766443222 257999999999999997643 35899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCc-EEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQ-VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~-vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
|+.||.|||+.+|+|+||||+||+++.++. +|++|||++.......
T Consensus 110 l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--------------------------------- 156 (257)
T cd08225 110 ISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM--------------------------------- 156 (257)
T ss_pred HHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc---------------------------------
Confidence 999999999999999999999999998754 6999999876322000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......|++
T Consensus 157 ----------------------------------------------------------------------~~~~~~~~~~ 166 (257)
T cd08225 157 ----------------------------------------------------------------------ELAYTCVGTP 166 (257)
T ss_pred ----------------------------------------------------------------------ccccccCCCc
Confidence 0001235678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
.|+|||++.+..++.++|+|||||++|||++|..|+... ......+....+++........+.+++.+||..+|++||
T Consensus 167 ~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 246 (257)
T cd08225 167 YYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRP 246 (257)
T ss_pred cccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCc
Confidence 899999998888999999999999999999999887432 222333334444444444557799999999999999999
Q ss_pred ChhHHhhhHHH
Q 002843 575 TTREILQSEVT 585 (874)
Q Consensus 575 Ta~EiL~hp~~ 585 (874)
|+.+++.||||
T Consensus 247 t~~~ll~~~~~ 257 (257)
T cd08225 247 SITSILKRPFL 257 (257)
T ss_pred CHHHHhhCCCC
Confidence 99999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-28 Score=262.57 Aligned_cols=209 Identities=15% Similarity=0.179 Sum_probs=157.1
Q ss_pred HHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHH
Q 002843 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (874)
Q Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~a 341 (874)
+...+....|++++.+......+.. .+++|||+ +++|.+++......+++.+++.++.||+.|
T Consensus 52 e~~~l~~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~a 114 (298)
T cd07841 52 EIKLLQELKHPNIIGLLDVFGHKSN----------------INLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRG 114 (298)
T ss_pred HHHHHhhcCCCCChhhhheeecCCE----------------EEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 4456666779988888776553221 25799999 899999998764469999999999999999
Q ss_pred HHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccc
Q 002843 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (874)
Q Consensus 342 L~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~ 421 (874)
|.|||++||+|+||||+||+++.++.++|+|||+++......
T Consensus 115 l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-------------------------------------- 156 (298)
T cd07841 115 LEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN-------------------------------------- 156 (298)
T ss_pred HHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC--------------------------------------
Confidence 999999999999999999999999999999999886432000
Q ss_pred ccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCc
Q 002843 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (874)
Q Consensus 422 ~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~AP 501 (874)
.......+++.|+||
T Consensus 157 -----------------------------------------------------------------~~~~~~~~~~~y~aP 171 (298)
T cd07841 157 -----------------------------------------------------------------RKMTHQVVTRWYRAP 171 (298)
T ss_pred -----------------------------------------------------------------ccccccccceeeeCH
Confidence 000123457789999
Q ss_pred ccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcC---C----------C---------C-----CCC
Q 002843 502 EELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDR---I----------L---------P-----PSF 551 (874)
Q Consensus 502 Evl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~---~----------l---------p-----p~~ 551 (874)
|.+.+ ..++.++|||||||++|||++|.++|..... .+..+... . + + ..+
T Consensus 172 E~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
T cd07841 172 ELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIF 251 (298)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhc
Confidence 99865 4578999999999999999999777632110 11111100 0 0 0 011
Q ss_pred CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 552 ~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
......+.+||.+||.++|++|||+.|+|.|+||.+...
T Consensus 252 ~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~ 290 (298)
T cd07841 252 PAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPA 290 (298)
T ss_pred ccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCC
Confidence 223456889999999999999999999999999997543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=254.14 Aligned_cols=214 Identities=14% Similarity=0.034 Sum_probs=159.7
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-----CCCCCHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-----GHKGKRIECL 332 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-----~~~lse~e~~ 332 (874)
....+...++...||+++.+............ ....+++|||+++++|..++... ...+++..++
T Consensus 47 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~----------~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 116 (273)
T cd05035 47 EFLSEAACMKDFDHPNVMKLIGVCFEASSLQK----------IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLL 116 (273)
T ss_pred HHHHHHHHHHhCCCCCeeeEEeeeccCCcccc----------CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHH
Confidence 44556677888889998887765432221000 01146799999999999999542 1268999999
Q ss_pred HHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 333 YIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 333 ~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
.++.||+.||+|||++||+||||||+||++++++.+||+|||+++.......
T Consensus 117 ~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------- 168 (273)
T cd05035 117 KFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDY---------------------------- 168 (273)
T ss_pred HHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeecccccc----------------------------
Confidence 9999999999999999999999999999999999999999999874330000
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
.. .....
T Consensus 169 ----------------------------~~---------------------------------------------~~~~~ 175 (273)
T cd05035 169 ----------------------------YR---------------------------------------------QGRIA 175 (273)
T ss_pred ----------------------------cc---------------------------------------------ccccc
Confidence 00 00111
Q ss_pred cccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccC
Q 002843 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 493 ~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~d 569 (874)
.++..|+|||.+.+..++.++|||||||++|||++ |..|+... ......+.....++......+.+.+++.+||..|
T Consensus 176 ~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 255 (273)
T cd05035 176 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRAD 255 (273)
T ss_pred cCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCC
Confidence 23457999999988889999999999999999998 77776332 2233444444444444455678999999999999
Q ss_pred CCCCCChhHHhhh
Q 002843 570 PLSRPTTREILQS 582 (874)
Q Consensus 570 P~~RPTa~EiL~h 582 (874)
|.+||++.|++.+
T Consensus 256 p~~Rp~~~e~~~~ 268 (273)
T cd05035 256 PKDRPTFTKLREV 268 (273)
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999765
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=253.85 Aligned_cols=208 Identities=18% Similarity=0.108 Sum_probs=156.7
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC------CCCCCHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR------GHKGKRIE 330 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~------~~~lse~e 330 (874)
.....+...++...||+++.+......+.. .+++|||++|++|.++|... ...+++.+
T Consensus 44 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 107 (269)
T cd05044 44 KEFLKEAHLMSNFNHPNIVKLLGVCLLNEP----------------QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKE 107 (269)
T ss_pred HHHHHHHHHHHhcCCCCeeeEeeeecCCCC----------------eEEEEeccCCCcHHHHHHHhhhcccCCccccHHH
Confidence 345556677888889999988766442222 25799999999999999652 22488999
Q ss_pred HHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCC-----cEEEeccccchhccccccCCCCcchhhhhhcccchhhhc
Q 002843 331 CLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN-----QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMF 405 (874)
Q Consensus 331 ~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~-----~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~df 405 (874)
++.++.||+.||.|||+.+|+|+||||+||+++.++ .++++|||+++.+.....
T Consensus 108 ~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~--------------------- 166 (269)
T cd05044 108 LLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDY--------------------- 166 (269)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccc---------------------
Confidence 999999999999999999999999999999999887 899999999864330000
Q ss_pred cccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccc
Q 002843 406 TTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQ 485 (874)
Q Consensus 406 g~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~ 485 (874)
.
T Consensus 167 -----------------------------------~-------------------------------------------- 167 (269)
T cd05044 167 -----------------------------------Y-------------------------------------------- 167 (269)
T ss_pred -----------------------------------c--------------------------------------------
Confidence 0
Q ss_pred ccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 002843 486 STSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFC 562 (874)
Q Consensus 486 ~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi 562 (874)
.......++..|+|||.+.++.++.++|||||||++|||++ |..||... ......+.....+.........+.+|+
T Consensus 168 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 246 (269)
T cd05044 168 -RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPDKIYQLM 246 (269)
T ss_pred -ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccchHHHHHHH
Confidence 00012234568999999998889999999999999999998 88886422 222333333322222233456789999
Q ss_pred HHccccCCCCCCChhHHhh
Q 002843 563 LWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 563 ~~cL~~dP~~RPTa~EiL~ 581 (874)
.+||.++|.+||++.++++
T Consensus 247 ~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 247 TNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred HHHcCCCcccCCCHHHHHH
Confidence 9999999999999999865
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=257.98 Aligned_cols=215 Identities=16% Similarity=0.186 Sum_probs=166.6
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....|++++.+......+.. .+++|||++|++|.+++......+++.++..++.
T Consensus 60 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~ 123 (286)
T cd06614 60 ELIINEILIMKDCKHPNIVDYYDSYLVGDE----------------LWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCR 123 (286)
T ss_pred HHHHHHHHHHHHCCCCCeeEEEEEEEECCE----------------EEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHH
Confidence 344555567777889988888776654432 2569999999999999987654799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 124 ~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~--------------------------------- 170 (286)
T cd06614 124 EVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK--------------------------------- 170 (286)
T ss_pred HHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch---------------------------------
Confidence 99999999999999999999999999999999999999875322000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......++.
T Consensus 171 ----------------------------------------------------------------------~~~~~~~~~~ 180 (286)
T cd06614 171 ----------------------------------------------------------------------SKRNSVVGTP 180 (286)
T ss_pred ----------------------------------------------------------------------hhhccccCCc
Confidence 0001235677
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCCC--CCCCHHHHHHHHHccccCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPSF--LSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~~--~~~~p~l~dLi~~cL~~dP~~ 572 (874)
.|+|||.+.+..++.++|||||||++|+|++|..|+..... .+..+.....++.. ......+.+||.+||+.+|.+
T Consensus 181 ~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 260 (286)
T cd06614 181 YWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEK 260 (286)
T ss_pred ccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhh
Confidence 99999999988899999999999999999999988743221 12222222222211 113467899999999999999
Q ss_pred CCChhHHhhhHHHHhhHh
Q 002843 573 RPTTREILQSEVTNEFQE 590 (874)
Q Consensus 573 RPTa~EiL~hp~~~~~~~ 590 (874)
||++.++|.|+||.....
T Consensus 261 Rpt~~~il~~~~~~~~~~ 278 (286)
T cd06614 261 RPSAEELLQHPFLKKACP 278 (286)
T ss_pred CcCHHHHhhChHhhccCc
Confidence 999999999999998443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=252.49 Aligned_cols=205 Identities=15% Similarity=0.126 Sum_probs=158.0
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC-CCCHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYI 334 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~-~lse~e~~~I 334 (874)
..+...+..+++...|++++.+.+...... ..+++|||+++++|.+++..... .+++..+..+
T Consensus 44 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ 107 (256)
T cd05039 44 AQAFLAEASVMTTLRHPNLVQLLGVVLQGN----------------PLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGF 107 (256)
T ss_pred HHHHHHHHHHHHhcCCcceeeeEEEEcCCC----------------CeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHH
Confidence 344566667788888998888776644221 13679999999999999976542 6999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 108 ~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~-------------------------------- 155 (256)
T cd05039 108 ALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG-------------------------------- 155 (256)
T ss_pred HHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccc--------------------------------
Confidence 999999999999999999999999999999999999999988632200
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
.....+
T Consensus 156 --------------------------------------------------------------------------~~~~~~ 161 (256)
T cd05039 156 --------------------------------------------------------------------------QDSGKL 161 (256)
T ss_pred --------------------------------------------------------------------------cccCCC
Confidence 001122
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
+..|+|||.+.+..++.++|||||||++|||++ |..|+... ......+.....+.......+.+.+|+.+||.++|+
T Consensus 162 ~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 241 (256)
T cd05039 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPA 241 (256)
T ss_pred cccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChh
Confidence 347999999988889999999999999999997 88776332 222333333322222233457789999999999999
Q ss_pred CCCChhHHhhh
Q 002843 572 SRPTTREILQS 582 (874)
Q Consensus 572 ~RPTa~EiL~h 582 (874)
+||++.++++.
T Consensus 242 ~Rp~~~~l~~~ 252 (256)
T cd05039 242 KRPTFKQLREQ 252 (256)
T ss_pred hCcCHHHHHHH
Confidence 99999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=256.35 Aligned_cols=209 Identities=14% Similarity=0.136 Sum_probs=158.6
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-------CCCCHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-------HKGKRI 329 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-------~~lse~ 329 (874)
.....+...+....|++++.+......++.. .++++||+.+++|.++|.... ..+++.
T Consensus 53 ~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~---------------~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~ 117 (280)
T cd05043 53 TLLLQESCLLYGLSHQNILPILHVCIEDGEP---------------PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQ 117 (280)
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEecCCCC---------------CEEEEEcCCCCcHHHHHHhccccccccccCCCHH
Confidence 3344555667777999999888765533221 257999999999999997631 368999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccc
Q 002843 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGI 409 (874)
Q Consensus 330 e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~ 409 (874)
+++.++.||+.||+|||+++|+||||||+||+++.++.+|++|||+++.+..... ..
T Consensus 118 ~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~---------------------~~-- 174 (280)
T cd05043 118 QLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDY---------------------HC-- 174 (280)
T ss_pred HHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCce---------------------EE--
Confidence 9999999999999999999999999999999999999999999999874430000 00
Q ss_pred hhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccc
Q 002843 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSV 489 (874)
Q Consensus 410 ~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~ 489 (874)
. .
T Consensus 175 -------------------------------~-----------------------------------------------~ 176 (280)
T cd05043 175 -------------------------------L-----------------------------------------------G 176 (280)
T ss_pred -------------------------------e-----------------------------------------------C
Confidence 0 0
Q ss_pred ccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHcc
Q 002843 490 SEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 490 t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL 566 (874)
....++..|+|||++.+..++.++|||||||++||+++ |..|+... ......+.....++......+.+.+++.+||
T Consensus 177 ~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 256 (280)
T cd05043 177 DNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQPINCPDELFAVMACCW 256 (280)
T ss_pred CCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHc
Confidence 11233567999999998889999999999999999998 88887432 1222333333332333334567899999999
Q ss_pred ccCCCCCCChhHHhh
Q 002843 567 HPEPLSRPTTREILQ 581 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~ 581 (874)
.++|++|||+.++++
T Consensus 257 ~~~p~~Rps~~~~~~ 271 (280)
T cd05043 257 ALDPEERPSFSQLVQ 271 (280)
T ss_pred CCChhhCCCHHHHHH
Confidence 999999999999974
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=255.72 Aligned_cols=202 Identities=16% Similarity=0.114 Sum_probs=152.6
Q ss_pred HHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------------C
Q 002843 261 AGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------H 324 (874)
Q Consensus 261 ~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---------------~ 324 (874)
.+...+... .||+++.+.+....++.. +++|||+++++|.++|.... .
T Consensus 44 ~E~~~l~~l~~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~ 107 (270)
T cd05047 44 GELEVLCKLGHHPNIINLLGACEHRGYL----------------YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 107 (270)
T ss_pred HHHHHHHhhccCCCeeeEEEEEecCCCc----------------eEEEEeCCCCcHHHHHHhccccccccccccccCCcC
Confidence 333444444 789988887776544432 46999999999999997542 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhh
Q 002843 325 KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEM 404 (874)
Q Consensus 325 ~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~d 404 (874)
.+++.+++.++.||+.||+|||+.||+||||||+|||++.++.+|++|||+++.....
T Consensus 108 ~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~---------------------- 165 (270)
T cd05047 108 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY---------------------- 165 (270)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh----------------------
Confidence 4789999999999999999999999999999999999999999999999987521100
Q ss_pred ccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccc
Q 002843 405 FTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQ 484 (874)
Q Consensus 405 fg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~ 484 (874)
..
T Consensus 166 ------------------------------------~~------------------------------------------ 167 (270)
T cd05047 166 ------------------------------------VK------------------------------------------ 167 (270)
T ss_pred ------------------------------------hh------------------------------------------
Confidence 00
Q ss_pred cccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHH
Q 002843 485 QSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGF 561 (874)
Q Consensus 485 ~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dL 561 (874)
......+..|+|||++.+..++.++|||||||++|||++ |..||... ......+......+........+.+|
T Consensus 168 ----~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 243 (270)
T cd05047 168 ----KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDL 243 (270)
T ss_pred ----ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHH
Confidence 001122457999999988889999999999999999997 88887432 22233333332222333445678999
Q ss_pred HHHccccCCCCCCChhHHhhh
Q 002843 562 CLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 562 i~~cL~~dP~~RPTa~EiL~h 582 (874)
+.+||+.+|.+||++.++++.
T Consensus 244 i~~~l~~~p~~Rps~~~il~~ 264 (270)
T cd05047 244 MRQCWREKPYERPSFAQILVS 264 (270)
T ss_pred HHHHcccChhhCCCHHHHHHH
Confidence 999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=253.23 Aligned_cols=204 Identities=15% Similarity=0.159 Sum_probs=156.8
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIF 335 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I~ 335 (874)
...+..++....|++++.+......++.. +++|||++|++|.+++.. ....+++..++.++
T Consensus 49 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~----------------~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 112 (267)
T cd08229 49 CIKEIDLLKQLNHPNVIKYYASFIEDNEL----------------NIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYF 112 (267)
T ss_pred HHHHHHHHHHccCCchhhhhheeEeCCeE----------------EEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHH
Confidence 34455677777899888877765533332 469999999999999974 23368999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
.||+.||.|||++||+|+||||+||+++.++.++++|||++.......
T Consensus 113 ~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-------------------------------- 160 (267)
T cd08229 113 VQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-------------------------------- 160 (267)
T ss_pred HHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC--------------------------------
Confidence 999999999999999999999999999999999999999876322000
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
.......|+
T Consensus 161 -----------------------------------------------------------------------~~~~~~~~~ 169 (267)
T cd08229 161 -----------------------------------------------------------------------TAAHSLVGT 169 (267)
T ss_pred -----------------------------------------------------------------------cccccccCC
Confidence 000133577
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH----HHHHHhhcCCCCCCC-CCCCHHHHHHHHHccccCC
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA----AAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~----~~~~~l~~~~lpp~~-~~~~p~l~dLi~~cL~~dP 570 (874)
..|+|||.+.+..++.++|||||||++|+|++|..|+.... .....+.....++.. ....+.+.+|+.+||+.+|
T Consensus 170 ~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 249 (267)
T cd08229 170 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDP 249 (267)
T ss_pred cCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCc
Confidence 89999999998889999999999999999999998874322 222223322223222 2345678999999999999
Q ss_pred CCCCChhHHhh
Q 002843 571 LSRPTTREILQ 581 (874)
Q Consensus 571 ~~RPTa~EiL~ 581 (874)
++|||+.+|++
T Consensus 250 ~~Rpt~~~i~~ 260 (267)
T cd08229 250 EKRPDITYVYD 260 (267)
T ss_pred ccCCCHHHHHH
Confidence 99999998865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=260.67 Aligned_cols=207 Identities=14% Similarity=0.122 Sum_probs=156.6
Q ss_pred HHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHH
Q 002843 259 KAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFR 336 (874)
Q Consensus 259 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~ 336 (874)
...+..++... .|++++.++.....++. .+++|||+.|++|.+++.... ..+++.+++.|+.
T Consensus 85 ~~~E~~~l~~l~~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~ 148 (302)
T cd05055 85 LMSELKIMSHLGNHENIVNLLGACTIGGP----------------ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSY 148 (302)
T ss_pred HHHHHHHHHhccCCCCcceEEEEEecCCc----------------eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHH
Confidence 33444556666 79999988876553332 257999999999999997643 2489999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||+++|+|+||||+|||++.++.++++|||+++.......
T Consensus 149 ~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~-------------------------------- 196 (302)
T cd05055 149 QVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSN-------------------------------- 196 (302)
T ss_pred HHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCc--------------------------------
Confidence 999999999999999999999999999999999999999864320000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
. .......++.
T Consensus 197 ------------------------~---------------------------------------------~~~~~~~~~~ 207 (302)
T cd05055 197 ------------------------Y---------------------------------------------VVKGNARLPV 207 (302)
T ss_pred ------------------------e---------------------------------------------eecCCCCccc
Confidence 0 0001223467
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH---HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL---AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~---~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
.|+|||.+.+..++.++|||||||++|||++ |..|+... ......+.....++......+.+.+|+.+||+++|++
T Consensus 208 ~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~ 287 (302)
T cd05055 208 KWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLK 287 (302)
T ss_pred ccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchh
Confidence 8999999998889999999999999999998 88886421 1122223333333333344578999999999999999
Q ss_pred CCChhHHhhh
Q 002843 573 RPTTREILQS 582 (874)
Q Consensus 573 RPTa~EiL~h 582 (874)
||++.|+++.
T Consensus 288 Rpt~~ell~~ 297 (302)
T cd05055 288 RPTFKQIVQL 297 (302)
T ss_pred CcCHHHHHHH
Confidence 9999999763
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=254.10 Aligned_cols=206 Identities=16% Similarity=0.084 Sum_probs=158.6
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFR 336 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~ 336 (874)
....+..++....|++++.+......... .+++|||++|++|.+++... +..+++..++.++.
T Consensus 47 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 110 (261)
T cd05072 47 AFLEEANLMKTLQHDKLVRLYAVVTKEEP----------------IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA 110 (261)
T ss_pred HHHHHHHHHHhCCCCCeeeEEEEEcCCCC----------------cEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHH
Confidence 34455667777889998887665432222 25799999999999999753 34689999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||+.+++||||||+||+++.++.+|++|||+++...+...
T Consensus 111 ~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-------------------------------- 158 (261)
T cd05072 111 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-------------------------------- 158 (261)
T ss_pred HHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCce--------------------------------
Confidence 999999999999999999999999999999999999999864320000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......++.
T Consensus 159 ----------------------------------------------------------------------~~~~~~~~~~ 168 (261)
T cd05072 159 ----------------------------------------------------------------------TAREGAKFPI 168 (261)
T ss_pred ----------------------------------------------------------------------eccCCCccce
Confidence 0001223456
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||.+.+..++.++|||||||++|+|++ |..||.. .......+......+........+.+|+.+||+++|++|
T Consensus 169 ~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 248 (261)
T cd05072 169 KWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEER 248 (261)
T ss_pred ecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccC
Confidence 8999999998889999999999999999998 8888742 222344444444444444555778999999999999999
Q ss_pred CChhHHhh
Q 002843 574 PTTREILQ 581 (874)
Q Consensus 574 PTa~EiL~ 581 (874)
|++.++++
T Consensus 249 p~~~~i~~ 256 (261)
T cd05072 249 PTFDYLQS 256 (261)
T ss_pred cCHHHHHH
Confidence 99998854
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-28 Score=261.78 Aligned_cols=212 Identities=13% Similarity=0.107 Sum_probs=163.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..+++...||+++.+.+....... .+++|||++|++|.+++.+. .+++.++..++.||
T Consensus 63 ~~~e~~~l~~l~hp~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l 124 (293)
T cd06647 63 IINEILVMRENKHPNIVNYLDSYLVGDE----------------LWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCREC 124 (293)
T ss_pred HHHHHHHHhhcCCCCeeehhheeeeCCc----------------EEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHH
Confidence 4445566777889988887766443222 35799999999999999765 58999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 125 ~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~------------------------------------ 168 (293)
T cd06647 125 LQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE------------------------------------ 168 (293)
T ss_pred HHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccc------------------------------------
Confidence 99999999999999999999999999999999999987532200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. .......|++.|
T Consensus 169 -----------------------~--------------------------------------------~~~~~~~~~~~y 181 (293)
T cd06647 169 -----------------------Q--------------------------------------------SKRSTMVGTPYW 181 (293)
T ss_pred -----------------------c--------------------------------------------cccccccCChhh
Confidence 0 000233577899
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHH--HHHhhcCCCCCCC---CCCCHHHHHHHHHccccCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAA--MSDLRDRILPPSF---LSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~--~~~l~~~~lpp~~---~~~~p~l~dLi~~cL~~dP~~R 573 (874)
+|||.+.+..++.++|||||||++|+|++|..||...... ...+.... .+.+ ......+.+|+.+||..+|++|
T Consensus 182 ~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (293)
T cd06647 182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-TPELQNPEKLSAIFRDFLNRCLEMDVEKR 260 (293)
T ss_pred cCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCC-CCCCCCccccCHHHHHHHHHHccCChhhC
Confidence 9999998888999999999999999999999998532211 11111111 1111 1234568899999999999999
Q ss_pred CChhHHhhhHHHHhhHhhh
Q 002843 574 PTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 574 PTa~EiL~hp~~~~~~~~~ 592 (874)
|++.+++.|+||...+.+.
T Consensus 261 p~~~~il~h~~~~~~~~~~ 279 (293)
T cd06647 261 GSAKELLQHPFLKIAKPLS 279 (293)
T ss_pred cCHHHHhcCHHHhcCcccc
Confidence 9999999999999776544
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=253.89 Aligned_cols=206 Identities=12% Similarity=0.074 Sum_probs=157.9
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....|++++.+..... +. ..+++|||+++++|.+++.+....+++..++.++.|
T Consensus 53 ~~~~e~~~l~~~~h~~i~~~~~~~~-~~----------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 115 (270)
T cd05056 53 KFLQEAYIMRQFDHPHIVKLIGVIT-EN----------------PVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQ 115 (270)
T ss_pred HHHHHHHHHHhCCCCchhceeEEEc-CC----------------CcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHH
Confidence 4455666777788999888776432 11 125799999999999999876557999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||+.|++||||||+|||++.++.+|++|||+++.......
T Consensus 116 l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------------------------- 162 (270)
T cd05056 116 LSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY--------------------------------- 162 (270)
T ss_pred HHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccc---------------------------------
Confidence 99999999999999999999999999999999999998864320000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
...+...++..
T Consensus 163 ---------------------------------------------------------------------~~~~~~~~~~~ 173 (270)
T cd05056 163 ---------------------------------------------------------------------YKASKGKLPIK 173 (270)
T ss_pred ---------------------------------------------------------------------eecCCCCcccc
Confidence 00011123457
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.+..++.++|||||||++|||++ |..||.... .....+.....++......+.+.+|+.+||.++|.+||
T Consensus 174 y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 253 (270)
T cd05056 174 WMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRP 253 (270)
T ss_pred ccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCc
Confidence 999999988889999999999999999985 988874321 22333444333333344557899999999999999999
Q ss_pred ChhHHhhh
Q 002843 575 TTREILQS 582 (874)
Q Consensus 575 Ta~EiL~h 582 (874)
|+.+++..
T Consensus 254 t~~~~~~~ 261 (270)
T cd05056 254 RFTELKAQ 261 (270)
T ss_pred CHHHHHHH
Confidence 99988754
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=252.46 Aligned_cols=213 Identities=20% Similarity=0.186 Sum_probs=161.2
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+...++...|++++.+......... .+++|||++|++|.+++.... .+++..++.|+.
T Consensus 44 ~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~ 106 (264)
T cd06626 44 KEIADEMKVLELLKHPNLVKYYGVEVHREK----------------VYIFMEYCSGGTLEELLEHGR-ILDEHVIRVYTL 106 (264)
T ss_pred HHHHHHHHHHHhCCCCChhheeeeEecCCE----------------EEEEEecCCCCcHHHHHhhcC-CCChHHHHHHHH
Confidence 344555567777788888877765432222 257999999999999998765 689999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||+.||+|+||+|+||+++.++.+||+|||++........
T Consensus 107 ~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~-------------------------------- 154 (264)
T cd06626 107 QLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT-------------------------------- 154 (264)
T ss_pred HHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC--------------------------------
Confidence 999999999999999999999999999999999999998764331000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
. +. .......++.
T Consensus 155 ----------------------------------------~---------------------~~------~~~~~~~~~~ 167 (264)
T cd06626 155 ----------------------------------------T---------------------MG------EEVQSLAGTP 167 (264)
T ss_pred ----------------------------------------c---------------------cc------ccccCCcCCc
Confidence 0 00 0001235677
Q ss_pred cccCcccccCCC---CCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhhcCCCC--CCCCCCCHHHHHHHHHcccc
Q 002843 497 WYASPEELSGGV---CTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLRDRILP--PSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 497 ~Y~APEvl~g~~---ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~~~~lp--p~~~~~~p~l~dLi~~cL~~ 568 (874)
.|+|||++.+.. ++.++|||||||++|||++|..||... ......+.....+ |......+.+.+|+.+||+.
T Consensus 168 ~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 247 (264)
T cd06626 168 AYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLES 247 (264)
T ss_pred CccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccC
Confidence 999999998766 889999999999999999999998532 1111122222111 22223357789999999999
Q ss_pred CCCCCCChhHHhhhHHH
Q 002843 569 EPLSRPTTREILQSEVT 585 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~ 585 (874)
+|.+||++.+++.|||+
T Consensus 248 ~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 248 DPKKRPTASELLQHPFV 264 (264)
T ss_pred CcccCCCHHHHhcCCCC
Confidence 99999999999999995
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=257.73 Aligned_cols=208 Identities=16% Similarity=0.143 Sum_probs=156.0
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFR 336 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~ 336 (874)
....+...+....||+++.+.+....+.. .+++|||+. ++|.+++... +..+++..++.++.
T Consensus 45 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----------------~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~ 107 (284)
T cd07860 45 TAIREISLLKELNHPNIVKLLDVIHTENK----------------LYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLF 107 (284)
T ss_pred HHHHHHHHHHhcCCCCCcchhhhcccCCc----------------EEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHH
Confidence 34455667777889999988776543222 257999996 6899999653 34799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||+.||+||||+|+||+++.++.+|++|||+++......
T Consensus 108 ~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~--------------------------------- 154 (284)
T cd07860 108 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--------------------------------- 154 (284)
T ss_pred HHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc---------------------------------
Confidence 99999999999999999999999999999999999999876332000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......+++
T Consensus 155 ----------------------------------------------------------------------~~~~~~~~~~ 164 (284)
T cd07860 155 ----------------------------------------------------------------------RTYTHEVVTL 164 (284)
T ss_pred ----------------------------------------------------------------------cccccccccc
Confidence 0002234678
Q ss_pred cccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhhcCCC-----------------------CC
Q 002843 497 WYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLRDRIL-----------------------PP 549 (874)
Q Consensus 497 ~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~~~~l-----------------------pp 549 (874)
+|+|||++.+.. ++.++|||||||++|||++|..||... ......+..... +.
T Consensus 165 ~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd07860 165 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQ 244 (284)
T ss_pred cccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhccccccc
Confidence 999999987754 688999999999999999998876321 111111110000 00
Q ss_pred ----CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 550 ----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 550 ----~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
......+.+.+||.+||+.||++|||+.++|.||||
T Consensus 245 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 245 DFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 012235678899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=254.36 Aligned_cols=206 Identities=12% Similarity=0.136 Sum_probs=158.2
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+...+....||+++.+......+.. .+++|||++|++|.+++......+++.+++.|+.||+
T Consensus 53 ~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 116 (267)
T cd05066 53 LSEASIMGQFDHPNIIHLEGVVTKSKP----------------VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIA 116 (267)
T ss_pred HHHHHHHHhCCCCCcceEEEEEecCCc----------------cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 344456667789999888766542222 2569999999999999987655789999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||++||+||||||+|||++.++.++++|||+++.+.....
T Consensus 117 ~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~----------------------------------- 161 (267)
T cd05066 117 SGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE----------------------------------- 161 (267)
T ss_pred HHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc-----------------------------------
Confidence 999999999999999999999999999999999998874330000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
+ ........++..|+
T Consensus 162 -----------------------------------------------------------~------~~~~~~~~~~~~y~ 176 (267)
T cd05066 162 -----------------------------------------------------------A------AYTTRGGKIPIRWT 176 (267)
T ss_pred -----------------------------------------------------------e------eeecCCCccceeec
Confidence 0 00001123356899
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa 576 (874)
|||.+.+..++.++|+|||||++|||++ |..|+... ......+.+...++......+.+.+|+.+||+++|.+||++
T Consensus 177 ~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 256 (267)
T cd05066 177 APEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKF 256 (267)
T ss_pred CHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCH
Confidence 9999998889999999999999999886 98887432 22233344443334444456778999999999999999999
Q ss_pred hHHhh
Q 002843 577 REILQ 581 (874)
Q Consensus 577 ~EiL~ 581 (874)
.++++
T Consensus 257 ~~i~~ 261 (267)
T cd05066 257 EQIVS 261 (267)
T ss_pred HHHHH
Confidence 99875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-28 Score=291.24 Aligned_cols=185 Identities=17% Similarity=0.102 Sum_probs=153.2
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccc
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESA 383 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~ 383 (874)
++||||++||+|-.+|.+.+ .+++..++.|+..|+.||+-||+.|+|||||||+||||+..|++||+|||.|-.+..++
T Consensus 151 YlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG 229 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG 229 (1317)
T ss_pred EEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCC
Confidence 56999999999999999988 89999999999999999999999999999999999999999999999999886554221
Q ss_pred cCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccccc
Q 002843 384 SLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHT 463 (874)
Q Consensus 384 ~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~ 463 (874)
.
T Consensus 230 ~------------------------------------------------------------------------------- 230 (1317)
T KOG0612|consen 230 T------------------------------------------------------------------------------- 230 (1317)
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred ccCcCCCCCCCCCcccccccccccccccccccccccCcccccC-----CCCCCccchhHHHHHHHHhcCCCCchHHHH--
Q 002843 464 NAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGVLFFELFGRFDSERALA-- 536 (874)
Q Consensus 464 ~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g-----~~ys~kSDIwSLGVIL~ELltG~~p~~~~~-- 536 (874)
......+|||-|+|||++.. +.|+..+|.||+||++|||++|-.||.+..
T Consensus 231 -----------------------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslv 287 (1317)
T KOG0612|consen 231 -----------------------VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLV 287 (1317)
T ss_pred -----------------------EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHH
Confidence 01146699999999999973 458999999999999999999999995433
Q ss_pred HHHHHhhc----CCCCCCCCCCCHHHHHHHHHccccCCCCCCC---hhHHhhhHHHHhhHhhhh
Q 002843 537 AAMSDLRD----RILPPSFLSENPKEAGFCLWQLHPEPLSRPT---TREILQSEVTNEFQEVCA 593 (874)
Q Consensus 537 ~~~~~l~~----~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT---a~EiL~hp~~~~~~~~~~ 593 (874)
..+..|.+ -.+| .-...++...+||.++|. +|+.|.. +.++..||||.++.+...
T Consensus 288 eTY~KIm~hk~~l~FP-~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~i 349 (1317)
T KOG0612|consen 288 ETYGKIMNHKESLSFP-DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNI 349 (1317)
T ss_pred HHHHHHhchhhhcCCC-cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhh
Confidence 23333332 2344 444477888999999885 6888988 999999999999877543
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=250.73 Aligned_cols=201 Identities=14% Similarity=0.108 Sum_probs=154.4
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~Q 337 (874)
...+...+....||+++.+......++ .+++|||+.|++|.+++.... ..+++..++.++.|
T Consensus 46 ~~~e~~~l~~~~~~~i~~~~~~~~~~~-----------------~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~q 108 (254)
T cd05083 46 FLEETAVMTKLHHKNLVRLLGVILHNG-----------------LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLD 108 (254)
T ss_pred HHHHHHHHHhCCCCCcCeEEEEEcCCC-----------------cEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHH
Confidence 344556677778999888876543221 357999999999999997643 36899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||+.|++||||||+||+++.++.+||+|||+++.....
T Consensus 109 i~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----------------------------------- 153 (254)
T cd05083 109 VAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----------------------------------- 153 (254)
T ss_pred HHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc-----------------------------------
Confidence 999999999999999999999999999999999999987522100
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. .....+..
T Consensus 154 -----------------------~------------------------------------------------~~~~~~~~ 162 (254)
T cd05083 154 -----------------------V------------------------------------------------DNSKLPVK 162 (254)
T ss_pred -----------------------C------------------------------------------------CCCCCCce
Confidence 0 01112357
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.+..++.++|||||||++|||++ |..||.... .....+.....++......+.+.+|+.+||..+|..||
T Consensus 163 y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 242 (254)
T cd05083 163 WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRP 242 (254)
T ss_pred ecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCc
Confidence 999999988889999999999999999997 888874322 12223333332222334457789999999999999999
Q ss_pred ChhHHhhh
Q 002843 575 TTREILQS 582 (874)
Q Consensus 575 Ta~EiL~h 582 (874)
++.+++..
T Consensus 243 ~~~~l~~~ 250 (254)
T cd05083 243 SFHKLREK 250 (254)
T ss_pred CHHHHHHH
Confidence 99998753
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=263.79 Aligned_cols=211 Identities=16% Similarity=0.149 Sum_probs=154.0
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC----CCCCCHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR----GHKGKRIECLYIF 335 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~----~~~lse~e~~~I~ 335 (874)
..+..++....||+++.+........... .+++|||+++ +|.+++... ...+++..++.|+
T Consensus 50 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--------------~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~ 114 (316)
T cd07842 50 CREIALLRELKHENVVSLVEVFLEHADKS--------------VYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLL 114 (316)
T ss_pred HHHHHHHHhcCCCCccceEEEEeCCCCce--------------EEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHH
Confidence 34455677778999988877655331111 3679999985 788877532 1268999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEec----CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQ----SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~----~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~ 411 (874)
.||+.||+|||+++|+||||||+|||++. ++.+|++|||+++.......
T Consensus 115 ~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~--------------------------- 167 (316)
T cd07842 115 WQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLK--------------------------- 167 (316)
T ss_pred HHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcc---------------------------
Confidence 99999999999999999999999999999 89999999998864330000
Q ss_pred hhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccc
Q 002843 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (874)
Q Consensus 412 ~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~ 491 (874)
.......
T Consensus 168 -------------------------------------------------------------------------~~~~~~~ 174 (316)
T cd07842 168 -------------------------------------------------------------------------PLADLDP 174 (316)
T ss_pred -------------------------------------------------------------------------cccccCC
Confidence 0000023
Q ss_pred ccccccccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH---------------HHHHhh------------
Q 002843 492 QLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA---------------AMSDLR------------ 543 (874)
Q Consensus 492 ~~GT~~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~---------------~~~~l~------------ 543 (874)
..++.+|+|||++.+. .++.++|||||||++|+|++|.+||..... .+..+.
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 254 (316)
T cd07842 175 VVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKK 254 (316)
T ss_pred ccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhh
Confidence 4678899999988764 589999999999999999999888742111 000000
Q ss_pred --------cCCCCCCCC------------CCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 544 --------DRILPPSFL------------SENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 544 --------~~~lpp~~~------------~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
.......+. ...+.+.+++.+||++||++|||+.|+++||||
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 255 MPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred cccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 000001111 334568899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=252.45 Aligned_cols=205 Identities=15% Similarity=0.078 Sum_probs=155.9
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~Q 337 (874)
...+...+....|++++.+......+.. .+++|||++|++|.+++... +..+++.++..++.|
T Consensus 48 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 111 (261)
T cd05068 48 FLAEAQIMKKLRHPKLIQLYAVCTLEEP----------------IYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQ 111 (261)
T ss_pred HHHHHHHHHHCCCCCccceeEEEecCCC----------------eeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHH
Confidence 4445566777789988887765443322 25699999999999999764 346999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 112 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------------- 158 (261)
T cd05068 112 VASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY--------------------------------- 158 (261)
T ss_pred HHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc---------------------------------
Confidence 99999999999999999999999999999999999999874330000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
........+..
T Consensus 159 ---------------------------------------------------------------------~~~~~~~~~~~ 169 (261)
T cd05068 159 ---------------------------------------------------------------------EAREGAKFPIK 169 (261)
T ss_pred ---------------------------------------------------------------------cccCCCcCcee
Confidence 00001112357
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.+..++.++|||||||++|||++ |..|+... ......+......+........+.+++.+||+.+|.+||
T Consensus 170 y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 249 (261)
T cd05068 170 WTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRP 249 (261)
T ss_pred ccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCC
Confidence 999999998889999999999999999999 88887432 222333333322233334457789999999999999999
Q ss_pred ChhHHhh
Q 002843 575 TTREILQ 581 (874)
Q Consensus 575 Ta~EiL~ 581 (874)
++.++++
T Consensus 250 ~~~~l~~ 256 (261)
T cd05068 250 TFETLQW 256 (261)
T ss_pred CHHHHHH
Confidence 9999864
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=260.34 Aligned_cols=207 Identities=14% Similarity=0.004 Sum_probs=158.3
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.++....... ..++|||+++|+|.+++......+++..++.++.|
T Consensus 55 ~~~~e~~~~~~l~h~niv~~~~~~~~~~-----------------~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~q 117 (303)
T cd05110 55 EFMDEALIMASMDHPHLVRLLGVCLSPT-----------------IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQ 117 (303)
T ss_pred HHHHHHHHHHhCCCCCcccEEEEEcCCC-----------------ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHH
Confidence 3445667778888999988876543111 24689999999999999876657999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 118 i~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~--------------------------------- 164 (303)
T cd05110 118 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK--------------------------------- 164 (303)
T ss_pred HHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCccc---------------------------------
Confidence 99999999999999999999999999999999999999864320000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. .......++..
T Consensus 165 -------------------------------------------------------------~-------~~~~~~~~~~~ 176 (303)
T cd05110 165 -------------------------------------------------------------E-------YNADGGKMPIK 176 (303)
T ss_pred -------------------------------------------------------------c-------cccCCCccccc
Confidence 0 00012344668
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.+..++.++|||||||++|||++ |..|+.. .......+.....++........+.+++..||..+|++||
T Consensus 177 y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp 256 (303)
T cd05110 177 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRP 256 (303)
T ss_pred cCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCc
Confidence 999999998889999999999999999997 7777632 1222223333333333334457789999999999999999
Q ss_pred ChhHHhhh
Q 002843 575 TTREILQS 582 (874)
Q Consensus 575 Ta~EiL~h 582 (874)
++.++++.
T Consensus 257 ~~~~l~~~ 264 (303)
T cd05110 257 KFKELAAE 264 (303)
T ss_pred CHHHHHHH
Confidence 99998774
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=279.90 Aligned_cols=197 Identities=21% Similarity=0.188 Sum_probs=157.8
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
.++.--.||+++.+.+....+... +++||++.|+-|.+.+.... ....++..|+.||+.||.
T Consensus 368 ~~~~~~~h~niv~~~~v~~~~~~~----------------~~v~e~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~ 429 (612)
T KOG0603|consen 368 ISLLVRDHPNIVKSHDVYEDGKEI----------------YLVMELLDGGELLRRIRSKP--EFCSEASQWAAELVSAVD 429 (612)
T ss_pred hhhhhcCCCcceeecceecCCcee----------------eeeehhccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHH
Confidence 455566788888777665433333 45999999999988887654 333888899999999999
Q ss_pred HHHHCCCcccCCCCCceEE-ecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKL-LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL-~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
|||++|||||||||+|||+ +..++++|+|||.++....+
T Consensus 430 ~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~---------------------------------------- 469 (612)
T KOG0603|consen 430 YLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS---------------------------------------- 469 (612)
T ss_pred HHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh----------------------------------------
Confidence 9999999999999999999 58899999999998754310
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
+-+.+=|..|.|||
T Consensus 470 ------------------------------------------------------------------~~tp~~t~~y~APE 483 (612)
T KOG0603|consen 470 ------------------------------------------------------------------CDTPALTLQYVAPE 483 (612)
T ss_pred ------------------------------------------------------------------hcccchhhcccChh
Confidence 01224467999999
Q ss_pred cccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCC-CCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 503 vl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~-~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
++....|++++|||||||+||+||+|+.|+.....- ..+..++.++.+ ...+..+++|+.+||++||.+||++.+++.
T Consensus 484 vl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 484 VLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred hhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHHhhcCCccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 999888999999999999999999999998654332 344444545544 345577899999999999999999999999
Q ss_pred hHHH
Q 002843 582 SEVT 585 (874)
Q Consensus 582 hp~~ 585 (874)
||||
T Consensus 563 h~w~ 566 (612)
T KOG0603|consen 563 HPWF 566 (612)
T ss_pred Ccch
Confidence 9999
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-28 Score=267.36 Aligned_cols=222 Identities=17% Similarity=0.219 Sum_probs=162.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+.......... ....+++|||+. ++|.+++...+ .+++.+++.++.||
T Consensus 51 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~------------~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~i~~qi 116 (334)
T cd07855 51 TLRELKILRHFKHDNIIAIRDILRPPGAD------------FKDVYVVMDLME-SDLHHIIHSDQ-PLTEEHIRYFLYQL 116 (334)
T ss_pred HHHHHHHHHhcCCCCccCHHHhccccCCC------------CceEEEEEehhh-hhHHHHhccCC-CCCHHHHHHHHHHH
Confidence 34455667777799988876653321110 011368999996 59999997765 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 117 ~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------- 162 (334)
T cd07855 117 LRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT---------------------------------- 162 (334)
T ss_pred HHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCc----------------------------------
Confidence 9999999999999999999999999999999999998864320000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.........+|+.+|
T Consensus 163 -----------------------------------------------------------------~~~~~~~~~~~~~~y 177 (334)
T cd07855 163 -----------------------------------------------------------------EHKYFMTEYVATRWY 177 (334)
T ss_pred -----------------------------------------------------------------CCCcccccccccccc
Confidence 000001245788899
Q ss_pred cCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhc--C--------------------CCCC----
Q 002843 499 ASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRD--R--------------------ILPP---- 549 (874)
Q Consensus 499 ~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~--~--------------------~lpp---- 549 (874)
+|||.+.+ ..++.++|||||||++|||++|..||..... .+..+.. + ..+.
T Consensus 178 ~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (334)
T cd07855 178 RAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPV 257 (334)
T ss_pred cChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCC
Confidence 99999876 4589999999999999999999988832111 0000000 0 0000
Q ss_pred ----CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhhh
Q 002843 550 ----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA 593 (874)
Q Consensus 550 ----~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~~ 593 (874)
.+....+.+.+||.+||+.+|.+||++.++|.||||........
T Consensus 258 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~ 305 (334)
T cd07855 258 PWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDD 305 (334)
T ss_pred CHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcc
Confidence 01234567899999999999999999999999999997665543
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=249.24 Aligned_cols=207 Identities=17% Similarity=0.217 Sum_probs=160.2
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..+++...|++++.+......+. ..+++|||++|++|.+++......+++..+..++.|
T Consensus 43 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~----------------~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~ 106 (253)
T cd05122 43 KIINEIQILKKCKHPNIVKYYGSYLKKD----------------ELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKE 106 (253)
T ss_pred HHHHHHHHHHhCCCCCEeEEEEEEecCC----------------eEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHH
Confidence 3444555666777888877766544332 236799999999999999876457999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||.+|++|+||+|+||+++.++.++|+|||++.......
T Consensus 107 i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~---------------------------------- 152 (253)
T cd05122 107 LLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK---------------------------------- 152 (253)
T ss_pred HHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccc----------------------------------
Confidence 9999999999999999999999999999999999999876332000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. .....++..
T Consensus 153 -------------------------------------------------------------------~---~~~~~~~~~ 162 (253)
T cd05122 153 -------------------------------------------------------------------A---RNTMVGTPY 162 (253)
T ss_pred -------------------------------------------------------------------c---ccceecCCc
Confidence 0 013356778
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCC--CHHHHHHHHHccccCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSE--NPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~--~p~l~dLi~~cL~~dP~~R 573 (874)
|+|||.+.+..++.++|||||||++|+|++|..|+... ...+........+...... ...+.+|+.+||..||++|
T Consensus 163 ~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 242 (253)
T cd05122 163 WMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKR 242 (253)
T ss_pred ccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhC
Confidence 99999999888999999999999999999999887543 1112222222222211222 4678999999999999999
Q ss_pred CChhHHhhhHH
Q 002843 574 PTTREILQSEV 584 (874)
Q Consensus 574 PTa~EiL~hp~ 584 (874)
||+.++|+|||
T Consensus 243 ~t~~~~l~~~~ 253 (253)
T cd05122 243 PTAEQLLKHPF 253 (253)
T ss_pred CCHHHHhcCCC
Confidence 99999999998
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=260.25 Aligned_cols=206 Identities=16% Similarity=0.130 Sum_probs=154.5
Q ss_pred HHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--------------
Q 002843 259 KAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-------------- 323 (874)
Q Consensus 259 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-------------- 323 (874)
...+..++... .||+++.+......++. .+++|||+.+++|.++|....
T Consensus 64 ~~~E~~~l~~l~~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~ 127 (314)
T cd05099 64 LISEMELMKLIGKHKNIINLLGVCTQEGP----------------LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVP 127 (314)
T ss_pred HHHHHHHHHhccCCCCeeeEEEEEccCCc----------------eEEEEecCCCCcHHHHHHhcCCCcccccccccCCc
Confidence 34444555555 69999988776543332 256999999999999997632
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchh
Q 002843 324 -HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEE 402 (874)
Q Consensus 324 -~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei 402 (874)
..+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 128 ~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------ 189 (314)
T cd05099 128 EEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDY------------------ 189 (314)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEcccccccccccccc------------------
Confidence 2588999999999999999999999999999999999999999999999999874330000
Q ss_pred hhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccc
Q 002843 403 EMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTA 482 (874)
Q Consensus 403 ~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~ 482 (874)
.
T Consensus 190 --------------------------------------~----------------------------------------- 190 (314)
T cd05099 190 --------------------------------------Y----------------------------------------- 190 (314)
T ss_pred --------------------------------------c-----------------------------------------
Confidence 0
Q ss_pred cccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHH
Q 002843 483 QQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEA 559 (874)
Q Consensus 483 ~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~ 559 (874)
.......++..|+|||++.+..++.++|||||||++|||++ |..||... ......+.....+.........+.
T Consensus 191 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 266 (314)
T cd05099 191 ----KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELY 266 (314)
T ss_pred ----cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHH
Confidence 00011123457999999998889999999999999999998 77776432 223333343332222234456788
Q ss_pred HHHHHccccCCCCCCChhHHhh
Q 002843 560 GFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 560 dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
+|+.+||..+|++||++.++++
T Consensus 267 ~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 267 MLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHcCCCcccCcCHHHHHH
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=265.23 Aligned_cols=157 Identities=18% Similarity=0.192 Sum_probs=120.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhh
Q 002843 325 KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEM 404 (874)
Q Consensus 325 ~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~d 404 (874)
.+++..+..++.||+.||+|||++||+||||||+|||++.++.+|++|||+++.......
T Consensus 175 ~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-------------------- 234 (343)
T cd05103 175 VLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-------------------- 234 (343)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc--------------------
Confidence 367888899999999999999999999999999999999999999999999864320000
Q ss_pred ccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccc
Q 002843 405 FTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQ 484 (874)
Q Consensus 405 fg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~ 484 (874)
.
T Consensus 235 ------------------------------------~------------------------------------------- 235 (343)
T cd05103 235 ------------------------------------Y------------------------------------------- 235 (343)
T ss_pred ------------------------------------h-------------------------------------------
Confidence 0
Q ss_pred cccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH---HHHHHHhhcCCCCCCCCCCCHHHHH
Q 002843 485 QSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL---AAAMSDLRDRILPPSFLSENPKEAG 560 (874)
Q Consensus 485 ~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~---~~~~~~l~~~~lpp~~~~~~p~l~d 560 (874)
.......++..|+|||++.+..++.++|||||||++|||++ |..|+... ......+.....++......+.+.+
T Consensus 236 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (343)
T cd05103 236 --VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 313 (343)
T ss_pred --hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHH
Confidence 00012234567999999998889999999999999999996 88776432 1222333333222222234577899
Q ss_pred HHHHccccCCCCCCChhHHhhh
Q 002843 561 FCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 561 Li~~cL~~dP~~RPTa~EiL~h 582 (874)
++.+||+.+|++||++.||++|
T Consensus 314 ~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 314 TMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999999999887
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=256.78 Aligned_cols=206 Identities=16% Similarity=0.097 Sum_probs=155.8
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------------
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--------------- 323 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~--------------- 323 (874)
...+..+++...||+++.+......+.. .+++|||+++++|.+++....
T Consensus 55 ~~~ei~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 118 (288)
T cd05050 55 FQREAALMAEFDHPNIVKLLGVCAVGKP----------------MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSAR 118 (288)
T ss_pred HHHHHHHHHhcCCCchheEEEEEcCCCc----------------cEEEEecCCCCCHHHHHHHcCccccccccccccccc
Confidence 3445567777789998887765442221 367999999999999997431
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhc
Q 002843 324 ------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRR 397 (874)
Q Consensus 324 ------~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~ 397 (874)
..+++.+++.++.||+.||+|||++||+||||||+|||++.++.++++|||+++.+.....
T Consensus 119 ~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~------------- 185 (288)
T cd05050 119 KCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY------------- 185 (288)
T ss_pred cccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCcc-------------
Confidence 2478889999999999999999999999999999999999999999999998763320000
Q ss_pred ccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCc
Q 002843 398 RSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPL 477 (874)
Q Consensus 398 r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~ 477 (874)
T Consensus 186 -------------------------------------------------------------------------------- 185 (288)
T cd05050 186 -------------------------------------------------------------------------------- 185 (288)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCC
Q 002843 478 VSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSE 554 (874)
Q Consensus 478 ~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~ 554 (874)
+.. ......+..|+|||.+.+..++.++|||||||++|||++ |..|+.. .......+.....++.....
T Consensus 186 -~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (288)
T cd05050 186 -YKA-------SENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNC 257 (288)
T ss_pred -ccc-------cCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCC
Confidence 000 011223457999999998889999999999999999997 7777632 23334445444444333345
Q ss_pred CHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 555 NPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 555 ~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
...+.+|+.+||..+|++|||+.|+++
T Consensus 258 ~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 258 PLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 578999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=253.12 Aligned_cols=212 Identities=13% Similarity=0.106 Sum_probs=158.0
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+...++...||+++.+......+.. .+++|||++|++|.+++......+++.+++.++.
T Consensus 50 ~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ 113 (269)
T cd05065 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSRP----------------VMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR 113 (269)
T ss_pred HHHHHHHHHHHhCCCcCcceEEEEECCCCc----------------eEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHH
Confidence 344556677788889999887766432221 2569999999999999987655799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
|++.||+|||++|++||||||+||+++.++.+|++|||+++.......
T Consensus 114 ~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~-------------------------------- 161 (269)
T cd05065 114 GIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS-------------------------------- 161 (269)
T ss_pred HHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcc--------------------------------
Confidence 999999999999999999999999999999999999998763320000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
... .........+.
T Consensus 162 -----------------------~~~-------------------------------------------~~~~~~~~~~~ 175 (269)
T cd05065 162 -----------------------DPT-------------------------------------------YTSSLGGKIPI 175 (269)
T ss_pred -----------------------ccc-------------------------------------------cccccCCCcce
Confidence 000 00000111245
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||.+.+..++.++|||||||++|||++ |..||... ......+......+......+.+.+++.+||.++|.+|
T Consensus 176 ~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 255 (269)
T cd05065 176 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNAR 255 (269)
T ss_pred eecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhC
Confidence 7999999998889999999999999999886 88887432 12233333322222233445678999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
|++.+|+..
T Consensus 256 p~~~~i~~~ 264 (269)
T cd05065 256 PKFGQIVST 264 (269)
T ss_pred cCHHHHHHH
Confidence 999999763
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=253.31 Aligned_cols=205 Identities=16% Similarity=0.142 Sum_probs=159.4
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIF 335 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I~ 335 (874)
...+..++....||+++.+.+.....+. .+++|||+++++|.+++.. ....+++..++.++
T Consensus 49 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 112 (267)
T cd08228 49 CVKEIDLLKQLNHPNVIKYLDSFIEDNE----------------LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYF 112 (267)
T ss_pred HHHHHHHHHhCCCcceeeeeeeEEECCe----------------EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHH
Confidence 4556677888889999888776553332 2469999999999999853 23368999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
.||+.||+|||++||+|+||||+||+++.++.++++|||+++......
T Consensus 113 ~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~-------------------------------- 160 (267)
T cd08228 113 VQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-------------------------------- 160 (267)
T ss_pred HHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh--------------------------------
Confidence 999999999999999999999999999999999999999876322000
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
.......|+
T Consensus 161 -----------------------------------------------------------------------~~~~~~~~~ 169 (267)
T cd08228 161 -----------------------------------------------------------------------TAAHSLVGT 169 (267)
T ss_pred -----------------------------------------------------------------------HHHhcCCCC
Confidence 000123567
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH----HHHHHHhhcCCCCCCCC-CCCHHHHHHHHHccccCC
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL----AAAMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~----~~~~~~l~~~~lpp~~~-~~~p~l~dLi~~cL~~dP 570 (874)
+.|+|||.+.+..++.++|||||||++|||++|..|+... ......+.....++... .....+.+|+.+||..+|
T Consensus 170 ~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p 249 (267)
T cd08228 170 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDP 249 (267)
T ss_pred ccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCc
Confidence 8999999999888999999999999999999998887322 22233334333444332 234668999999999999
Q ss_pred CCCCChhHHhhh
Q 002843 571 LSRPTTREILQS 582 (874)
Q Consensus 571 ~~RPTa~EiL~h 582 (874)
++||++.++++.
T Consensus 250 ~~Rp~~~~vl~~ 261 (267)
T cd08228 250 DQRPDIGYVHQI 261 (267)
T ss_pred ccCcCHHHHHHH
Confidence 999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=259.24 Aligned_cols=201 Identities=17% Similarity=0.157 Sum_probs=153.0
Q ss_pred HHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------------CCCCHH
Q 002843 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRI 329 (874)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---------------~~lse~ 329 (874)
+.....|++++.+......++.. +++||||.+++|.++|.... ..+++.
T Consensus 77 l~~l~~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~ 140 (307)
T cd05098 77 MKMIGKHKNIINLLGACTQDGPL----------------YVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFK 140 (307)
T ss_pred HHHhcCCCCEeeEEEEEecCCce----------------EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHH
Confidence 33344799988887765544332 46999999999999997642 248899
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccc
Q 002843 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGI 409 (874)
Q Consensus 330 e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~ 409 (874)
+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 141 ~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~------------------------- 195 (307)
T cd05098 141 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY------------------------- 195 (307)
T ss_pred HHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccch-------------------------
Confidence 9999999999999999999999999999999999999999999998763320000
Q ss_pred hhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccc
Q 002843 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSV 489 (874)
Q Consensus 410 ~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~ 489 (874)
. ...
T Consensus 196 -------------------------------~---------------------------------------------~~~ 199 (307)
T cd05098 196 -------------------------------Y---------------------------------------------KKT 199 (307)
T ss_pred -------------------------------h---------------------------------------------hcc
Confidence 0 000
Q ss_pred ccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHcc
Q 002843 490 SEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 490 t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL 566 (874)
....++..|+|||++.+..++.++|||||||++|||++ |..|+.. .......+.....++........+.+|+.+||
T Consensus 200 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 279 (307)
T cd05098 200 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCW 279 (307)
T ss_pred ccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHc
Confidence 11223468999999998889999999999999999998 7777643 22233344444333333345577899999999
Q ss_pred ccCCCCCCChhHHhhh
Q 002843 567 HPEPLSRPTTREILQS 582 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~h 582 (874)
+.+|.+||++.+++++
T Consensus 280 ~~~p~~Rps~~evl~~ 295 (307)
T cd05098 280 HAVPSQRPTFKQLVED 295 (307)
T ss_pred ccChhhCcCHHHHHHH
Confidence 9999999999999765
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=261.35 Aligned_cols=208 Identities=16% Similarity=0.167 Sum_probs=150.0
Q ss_pred hHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC----CCCCCHHHHHHHHHHH
Q 002843 264 MMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR----GHKGKRIECLYIFRQI 338 (874)
Q Consensus 264 ~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~----~~~lse~e~~~I~~QI 338 (874)
..+... .|++++.+......+..... . -.+++||||++ +|.+++... +..+++..++.++.||
T Consensus 52 ~~l~~l~~~~~i~~~~~~~~~~~~~~~-------~----~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi 119 (295)
T cd07837 52 SLLQMLSESIYIVRLLDVEHVEEKNGK-------P----SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQL 119 (295)
T ss_pred HHHHHccCCCCccceeeeEeecCCCCC-------c----eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHH
Confidence 344444 56888877765443322100 0 02579999996 899998653 2358999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEec-CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~-~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
+.||.|||++||+||||||+||+++. ++.+||+|||+++.....
T Consensus 120 ~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~----------------------------------- 164 (295)
T cd07837 120 LKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIP----------------------------------- 164 (295)
T ss_pred HHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCC-----------------------------------
Confidence 99999999999999999999999998 889999999987632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
....+...++++
T Consensus 165 --------------------------------------------------------------------~~~~~~~~~~~~ 176 (295)
T cd07837 165 --------------------------------------------------------------------VKSYTHEIVTLW 176 (295)
T ss_pred --------------------------------------------------------------------ccccCCcccccC
Confidence 000012345789
Q ss_pred ccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhh---cC---C---------------CCC---
Q 002843 498 YASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLR---DR---I---------------LPP--- 549 (874)
Q Consensus 498 Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~---~~---~---------------lpp--- 549 (874)
|+|||++.+. .++.++|||||||++|+|++|..||... ........ .. . ..+
T Consensus 177 ~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (295)
T cd07837 177 YRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDL 256 (295)
T ss_pred CCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhH
Confidence 9999988763 5799999999999999999998887321 11111111 00 0 000
Q ss_pred --CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHH
Q 002843 550 --SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (874)
Q Consensus 550 --~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~ 586 (874)
......+.+.+||.+||.+||.+||++.|+|.||||+
T Consensus 257 ~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 257 SRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 0123456788999999999999999999999999984
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-28 Score=250.02 Aligned_cols=202 Identities=15% Similarity=0.124 Sum_probs=165.4
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~-~~~~lse~e~~~I~~QIl~aL 342 (874)
......+||||...+...+.+... ||++||..+|+|...|.. ....+++..+..+++|++.||
T Consensus 74 EIqs~L~hpnilrlY~~fhd~~ri----------------yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al 137 (281)
T KOG0580|consen 74 EIQSHLRHPNILRLYGYFHDSKRI----------------YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANAL 137 (281)
T ss_pred EeecccCCccHHhhhhheecccee----------------EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHH
Confidence 455667788888887776644443 469999999999999984 233799999999999999999
Q ss_pred HHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 343 ~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
.|+|..+||||||||+|+|+...+.+|++|||-+-...
T Consensus 138 ~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p------------------------------------------ 175 (281)
T KOG0580|consen 138 LYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP------------------------------------------ 175 (281)
T ss_pred HHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC------------------------------------------
Confidence 99999999999999999999999999999999753110
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
.....+.+||.-|.+||
T Consensus 176 ---------------------------------------------------------------~~kR~tlcgt~dyl~pE 192 (281)
T KOG0580|consen 176 ---------------------------------------------------------------SNKRKTLCGTLDYLPPE 192 (281)
T ss_pred ---------------------------------------------------------------CCCceeeecccccCCHh
Confidence 00014679999999999
Q ss_pred cccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHH
Q 002843 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (874)
Q Consensus 503 vl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~Ei 579 (874)
...+..++..+|+|++||+.||++.|.+||+... .....|+. ....| ......++|||.+||..+|.+|.+..|+
T Consensus 193 mv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p--~~is~~a~dlI~~ll~~~p~~r~~l~~v 270 (281)
T KOG0580|consen 193 MVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP--STISGGAADLISRLLVKNPIERLALTEV 270 (281)
T ss_pred hcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC--cccChhHHHHHHHHhccCccccccHHHH
Confidence 9999999999999999999999999999996543 34455544 22223 3345668899999999999999999999
Q ss_pred hhhHHHHhh
Q 002843 580 LQSEVTNEF 588 (874)
Q Consensus 580 L~hp~~~~~ 588 (874)
+.|||+...
T Consensus 271 ~~hpwI~a~ 279 (281)
T KOG0580|consen 271 MDHPWIVAN 279 (281)
T ss_pred hhhHHHHhc
Confidence 999999753
|
|
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-27 Score=252.82 Aligned_cols=210 Identities=17% Similarity=0.115 Sum_probs=155.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...++...|++++.+.......+... .+++|||++|++|.+++......+++..++.++.||
T Consensus 53 ~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~--------------~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l 118 (284)
T cd05038 53 FEREIEILRTLDHENIVKYKGVCEKPGGRS--------------LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQI 118 (284)
T ss_pred HHHHHHHHHhCCCCChheEEeeeecCCCCc--------------eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHH
Confidence 344445677778998888766544322211 367999999999999998765569999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||+.||+|+||||+||+++.++.++++|||+++.......
T Consensus 119 ~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------- 164 (284)
T cd05038 119 CKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKD---------------------------------- 164 (284)
T ss_pred HHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCc----------------------------------
Confidence 9999999999999999999999999999999999998864330000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. . .......++..|
T Consensus 165 -------------------~--~---------------------------------------------~~~~~~~~~~~~ 178 (284)
T cd05038 165 -------------------Y--Y---------------------------------------------YVKEPGESPIFW 178 (284)
T ss_pred -------------------c--e---------------------------------------------eccCCCCCcccc
Confidence 0 0 000112234579
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH-----------------HHHHHhhcCCCCCCCCCCCHHHHHH
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA-----------------AAMSDLRDRILPPSFLSENPKEAGF 561 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~-----------------~~~~~l~~~~lpp~~~~~~p~l~dL 561 (874)
+|||.+.+..++.++|||||||++|||++|..|+.... .....+......+........+.+|
T Consensus 179 ~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 258 (284)
T cd05038 179 YAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDL 258 (284)
T ss_pred cCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHH
Confidence 99999988889999999999999999999987763211 1111222222222223344678999
Q ss_pred HHHccccCCCCCCChhHHhhh
Q 002843 562 CLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 562 i~~cL~~dP~~RPTa~EiL~h 582 (874)
+.+||.++|.+|||+.|+++.
T Consensus 259 i~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05038 259 MKLCWEAEPQDRPSFADLILI 279 (284)
T ss_pred HHHHhccChhhCCCHHHHHHH
Confidence 999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=249.11 Aligned_cols=208 Identities=16% Similarity=0.124 Sum_probs=156.1
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..+++...|++++.+......... .+++|||++|++|.+++......+++..++.++.|
T Consensus 38 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 101 (251)
T cd05041 38 KFLQEAEILKQYDHPNIVKLIGVCVQKQP----------------IYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLD 101 (251)
T ss_pred HHHHHHHHHHhCCCCCeEEEEEEEecCCC----------------eEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHH
Confidence 34455567778889988887766443322 25699999999999999775557899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
++.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 102 ~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------------------------- 148 (251)
T cd05041 102 AAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY--------------------------------- 148 (251)
T ss_pred HHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcc---------------------------------
Confidence 99999999999999999999999999999999999998763220000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. ... ....++..
T Consensus 149 ------------------------~------------------------------------~~~--------~~~~~~~~ 160 (251)
T cd05041 149 ------------------------T------------------------------------VSD--------GLKQIPIK 160 (251)
T ss_pred ------------------------e------------------------------------ecc--------ccCcceec
Confidence 0 000 01122457
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.++.++.++|||||||++|||++ |..|+.... .....+......+........+.+|+.+||..+|.+||
T Consensus 161 y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 240 (251)
T cd05041 161 WTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRP 240 (251)
T ss_pred cCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCc
Confidence 999999998889999999999999999998 777764321 22223332222222223456789999999999999999
Q ss_pred ChhHHhhh
Q 002843 575 TTREILQS 582 (874)
Q Consensus 575 Ta~EiL~h 582 (874)
|+.|+|+.
T Consensus 241 ~~~ell~~ 248 (251)
T cd05041 241 SFSEIYNE 248 (251)
T ss_pred CHHHHHHH
Confidence 99999864
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=263.42 Aligned_cols=216 Identities=19% Similarity=0.222 Sum_probs=159.1
Q ss_pred HHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 260 AAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 260 ~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
..+..++... .|++++.+.+....+.... .+++|||++ ++|.+++... .+++..++.++.||
T Consensus 54 ~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~--------------~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi 116 (337)
T cd07852 54 FREIMFLQELGDHPNIVKLLNVIKAENDKD--------------IYLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQL 116 (337)
T ss_pred hHHHHHHHHhcCCCCccceeeeeccCCCce--------------EEEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHH
Confidence 3455566666 8999888876543222111 257999998 5999999775 68999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 117 ~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~---------------------------------- 162 (337)
T cd07852 117 LKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE---------------------------------- 162 (337)
T ss_pred HHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccc----------------------------------
Confidence 9999999999999999999999999999999999999874330000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
...........||++|
T Consensus 163 ----------------------------------------------------------------~~~~~~~~~~~~~~~y 178 (337)
T cd07852 163 ----------------------------------------------------------------NPENPVLTDYVATRWY 178 (337)
T ss_pred ----------------------------------------------------------------cccCcchhcccccccc
Confidence 0000011345688999
Q ss_pred cCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHHH------H-----------------------HHHhhc---C
Q 002843 499 ASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALAA------A-----------------------MSDLRD---R 545 (874)
Q Consensus 499 ~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~------~-----------------------~~~l~~---~ 545 (874)
+|||++.+ ..++.++|||||||++|+|++|..||..... . +..+.. .
T Consensus 179 ~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (337)
T cd07852 179 RAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRK 258 (337)
T ss_pred cCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhccccccc
Confidence 99998865 4578999999999999999999887631100 0 000000 0
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 546 ~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.+...+......+.+||.+||+.+|++|||+.++|+|||++....
T Consensus 259 ~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 259 PLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHN 303 (337)
T ss_pred chhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhcc
Confidence 011112234567899999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=264.54 Aligned_cols=219 Identities=19% Similarity=0.227 Sum_probs=162.4
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....|++++.+.+......... ....+++|||+. ++|.+++...+ .+++..+..++.|
T Consensus 50 ~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~-----------~~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~q 116 (337)
T cd07858 50 RTLREIKLLRHLDHENVIAIKDIMPPPHREA-----------FNDVYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQ 116 (337)
T ss_pred HHHHHHHHHHhcCCCCccchHHheecccccc-----------cCcEEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHH
Confidence 3445556777778999988876543211100 011378999996 69999998765 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||+++|+||||||+||+++.++.+||+|||+++......
T Consensus 117 i~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------------------------- 162 (337)
T cd07858 117 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG---------------------------------- 162 (337)
T ss_pred HHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc----------------------------------
Confidence 9999999999999999999999999999999999999886322000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......++.+
T Consensus 163 ---------------------------------------------------------------------~~~~~~~~~~~ 173 (337)
T cd07858 163 ---------------------------------------------------------------------DFMTEYVVTRW 173 (337)
T ss_pred ---------------------------------------------------------------------ccccccccccC
Confidence 00023356789
Q ss_pred ccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH-----HHHHHhhcC---------------------C----
Q 002843 498 YASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA-----AAMSDLRDR---------------------I---- 546 (874)
Q Consensus 498 Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~-----~~~~~l~~~---------------------~---- 546 (874)
|+|||.+.+ ..++.++|||||||++|+|++|++||.... .....+... .
T Consensus 174 y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (337)
T cd07858 174 YRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPR 253 (337)
T ss_pred ccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccc
Confidence 999998875 458999999999999999999998873211 000000000 0
Q ss_pred --CCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 547 --LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 547 --lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
....+....+.+.+|+.+||+++|++|||+.++|+||||..+....
T Consensus 254 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~ 301 (337)
T cd07858 254 QSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPS 301 (337)
T ss_pred cCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcc
Confidence 0011234457788999999999999999999999999999876554
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=248.81 Aligned_cols=209 Identities=19% Similarity=0.181 Sum_probs=163.7
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC---CCCCCHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYI 334 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~---~~~lse~e~~~I 334 (874)
....+...++...|++.+.+.+....... .+++|||++|++|.+++... +..+++.++..+
T Consensus 45 ~~~~e~~~l~~l~~~~~~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i 108 (258)
T cd08215 45 DALNEVKILKKLNHPNIIKYYESFEEKGK----------------LCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDW 108 (258)
T ss_pred HHHHHHHHHHhcCCCChhheEEEEecCCE----------------EEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHH
Confidence 34445556777778888877666443211 35799999999999999874 247999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 109 ~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~------------------------------- 157 (258)
T cd08215 109 FVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV------------------------------- 157 (258)
T ss_pred HHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc-------------------------------
Confidence 9999999999999999999999999999999999999999876322000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
.......|
T Consensus 158 ------------------------------------------------------------------------~~~~~~~~ 165 (258)
T cd08215 158 ------------------------------------------------------------------------DLAKTVVG 165 (258)
T ss_pred ------------------------------------------------------------------------ceecceee
Confidence 00023467
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
++.|+|||.+.+..++.++||||||+++|+|++|..|+... ......+.....++........+.+++.+||..+|++
T Consensus 166 ~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 245 (258)
T cd08215 166 TPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEE 245 (258)
T ss_pred eecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhh
Confidence 78999999999888999999999999999999999887432 2223333333333333345577899999999999999
Q ss_pred CCChhHHhhhHHH
Q 002843 573 RPTTREILQSEVT 585 (874)
Q Consensus 573 RPTa~EiL~hp~~ 585 (874)
||++.++|+||||
T Consensus 246 Rp~~~~ll~~~~~ 258 (258)
T cd08215 246 RPSIAQILQSPFI 258 (258)
T ss_pred CcCHHHHhcCCCC
Confidence 9999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=253.34 Aligned_cols=207 Identities=15% Similarity=0.032 Sum_probs=158.8
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+...+....|++++.+...... . ..+++|||+++|+|.+++......+++..++.++.
T Consensus 54 ~~~~~e~~~l~~l~h~~i~~~~~~~~~-~----------------~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~ 116 (279)
T cd05057 54 KEILDEAYVMASVDHPHVVRLLGICLS-S----------------QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCV 116 (279)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEec-C----------------ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHH
Confidence 345556677778889998888765442 1 13579999999999999988655799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 117 qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~-------------------------------- 164 (279)
T cd05057 117 QIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK-------------------------------- 164 (279)
T ss_pred HHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCccc--------------------------------
Confidence 999999999999999999999999999999999999999874320000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
. .......++.
T Consensus 165 ----------------------------~-----------------------------------------~~~~~~~~~~ 175 (279)
T cd05057 165 ----------------------------E-----------------------------------------YHAEGGKVPI 175 (279)
T ss_pred ----------------------------c-----------------------------------------eecCCCcccc
Confidence 0 0000112345
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||.+....++.++|||||||++|||++ |..|+... ......+......+........+.+++.+||..+|..|
T Consensus 176 ~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~R 255 (279)
T cd05057 176 KWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESR 255 (279)
T ss_pred cccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence 7999999988889999999999999999998 88887432 12233333333333333455778999999999999999
Q ss_pred CChhHHhh
Q 002843 574 PTTREILQ 581 (874)
Q Consensus 574 PTa~EiL~ 581 (874)
|++.++++
T Consensus 256 p~~~~l~~ 263 (279)
T cd05057 256 PTFKELIN 263 (279)
T ss_pred CCHHHHHH
Confidence 99998754
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=248.28 Aligned_cols=205 Identities=18% Similarity=0.165 Sum_probs=158.6
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCC-CCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHK-GKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~-lse~e~~~I~~Q 337 (874)
...+..++....|++++.+......++. .+++|||++|++|.+++...... +++.+++.++.|
T Consensus 48 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~q 111 (258)
T smart00219 48 FLREARIMRKLDHPNIVKLLGVCTEEEP----------------LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQ 111 (258)
T ss_pred HHHHHHHHHhcCCCchheEEEEEcCCCe----------------eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHH
Confidence 3444456666688888887776553322 25699999999999999765433 999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||+.||+|+||||+||+++.++.++++|||+++.......
T Consensus 112 l~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------------- 158 (258)
T smart00219 112 IARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY--------------------------------- 158 (258)
T ss_pred HHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc---------------------------------
Confidence 99999999999999999999999999999999999998864330000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. . . ....+++.
T Consensus 159 -----------------------~-------------------------------------~-------~--~~~~~~~~ 169 (258)
T smart00219 159 -----------------------Y-------------------------------------K-------K--KGGKLPIR 169 (258)
T ss_pred -----------------------c-------------------------------------c-------c--ccCCCccc
Confidence 0 0 0 01125678
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.+..++.++|||||||++|+|++ |.+|+.. .......+.....++........+.+++.+||..+|++||
T Consensus 170 y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 249 (258)
T smart00219 170 WMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRP 249 (258)
T ss_pred ccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCc
Confidence 999999988889999999999999999998 7888742 2333444444444444444567799999999999999999
Q ss_pred ChhHHhh
Q 002843 575 TTREILQ 581 (874)
Q Consensus 575 Ta~EiL~ 581 (874)
|+.|+++
T Consensus 250 t~~~ll~ 256 (258)
T smart00219 250 TFSELVE 256 (258)
T ss_pred CHHHHHh
Confidence 9999875
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=251.97 Aligned_cols=205 Identities=19% Similarity=0.189 Sum_probs=157.5
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQ 337 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I~~Q 337 (874)
.+..+++...||+++.+......... .+++|||++|++|.+++.. .+..+++.+++.++.|
T Consensus 51 ~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (260)
T cd08222 51 QEAQLLSKLDHPAIVKFHASFLERDA----------------FCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQ 114 (260)
T ss_pred HHHHHHHhCCCCcHHHHHHHHhcCCc----------------eEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHH
Confidence 44456777789988887765442222 3579999999999999864 2347999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||+.||+|+||||+||+++. +.++++|||+++......
T Consensus 115 l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~---------------------------------- 159 (260)
T cd08222 115 LLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC---------------------------------- 159 (260)
T ss_pred HHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc----------------------------------
Confidence 999999999999999999999999974 679999999876322000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......|++.
T Consensus 160 ---------------------------------------------------------------------~~~~~~~~~~~ 170 (260)
T cd08222 160 ---------------------------------------------------------------------DLATTFTGTPY 170 (260)
T ss_pred ---------------------------------------------------------------------ccccCCCCCcC
Confidence 00012346778
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
|+|||.+.+..++.++|+|||||++|+|++|..|+.... .....+.....+.........+.+++.+||..+|++||+
T Consensus 171 ~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 250 (260)
T cd08222 171 YMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPS 250 (260)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcC
Confidence 999999988888999999999999999999988874322 122233333333333344567899999999999999999
Q ss_pred hhHHhhhHHH
Q 002843 576 TREILQSEVT 585 (874)
Q Consensus 576 a~EiL~hp~~ 585 (874)
+.++++||||
T Consensus 251 ~~~il~~~~~ 260 (260)
T cd08222 251 AAEILRNPFI 260 (260)
T ss_pred HHHHhhCCCC
Confidence 9999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=279.22 Aligned_cols=211 Identities=12% Similarity=0.075 Sum_probs=154.4
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC----CCCCHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG----HKGKRIECLYI 334 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~----~~lse~e~~~I 334 (874)
...+...+....||+++.++......... +++||++. ++|.+++.... ......+++.|
T Consensus 210 ~~~Ei~il~~l~HpnIv~l~~~~~~~~~~----------------~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i 272 (501)
T PHA03210 210 LENEILALGRLNHENILKIEEILRSEANT----------------YMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAI 272 (501)
T ss_pred HHHHHHHHHhCCCCCcCcEeEEEEECCee----------------EEEEeccc-cCHHHHHhhccccccccccHHHHHHH
Confidence 34556677888999999988776644433 45899996 68888875432 13446778899
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||+|||++|||||||||+|||++.++.+||+|||+++.+.....
T Consensus 273 ~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~------------------------------ 322 (501)
T PHA03210 273 MKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE------------------------------ 322 (501)
T ss_pred HHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccc------------------------------
Confidence 99999999999999999999999999999999999999999874320000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
......+|
T Consensus 323 ------------------------------------------------------------------------~~~~~~~g 330 (501)
T PHA03210 323 ------------------------------------------------------------------------AFDYGWVG 330 (501)
T ss_pred ------------------------------------------------------------------------cccccccC
Confidence 00023578
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcCCC-CchH-----HHHHHHHHhhc-----CCCC---------------
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRF-DSER-----ALAAAMSDLRD-----RILP--------------- 548 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~-~p~~-----~~~~~~~~l~~-----~~lp--------------- 548 (874)
|+.|+|||++.+..|+.++|||||||+||||++|. .|+. ........+.. ..+|
T Consensus 331 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~ 410 (501)
T PHA03210 331 TVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEI 410 (501)
T ss_pred CcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhc
Confidence 99999999999989999999999999999999874 3331 11111111110 0000
Q ss_pred --------CCC--CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 549 --------PSF--LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 549 --------p~~--~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
+.+ ......+.++|.+||.+||.+|||+.|+|.||||...
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 411 DHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred ccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 000 1123456788999999999999999999999999763
|
|
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=256.28 Aligned_cols=210 Identities=18% Similarity=0.184 Sum_probs=162.9
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...++...|++++........+.. .+++|||++|++|.+++... .+++..++.++.||
T Consensus 64 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql 125 (292)
T cd06657 64 LFNEVVIMRDYQHENVVEMYNSYLVGDE----------------LWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAV 125 (292)
T ss_pred HHHHHHHHHhcCCcchhheeeEEEeCCE----------------EEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHH
Confidence 3344456777788888877766543222 35799999999999988654 58999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||+.||+|+||+|+||+++.++.++++|||++......
T Consensus 126 ~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~------------------------------------ 169 (292)
T cd06657 126 LKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE------------------------------------ 169 (292)
T ss_pred HHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccc------------------------------------
Confidence 99999999999999999999999999999999999986532200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. .......|++.|
T Consensus 170 ----------------------~---------------------------------------------~~~~~~~~~~~y 182 (292)
T cd06657 170 ----------------------V---------------------------------------------PRRKSLVGTPYW 182 (292)
T ss_pred ----------------------c---------------------------------------------ccccccccCccc
Confidence 0 000134577899
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCC---CCCCCHHHHHHHHHccccCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPS---FLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~---~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
+|||.+.+..++.++|+|||||++|+|++|..|+... ......+.. .+++. .....+.+.+++.+||..+|.+|
T Consensus 183 ~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R 261 (292)
T cd06657 183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-NLPPKLKNLHKVSPSLKGFLDRLLVRDPAQR 261 (292)
T ss_pred cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-hCCcccCCcccCCHHHHHHHHHHHhCCcccC
Confidence 9999998888999999999999999999999887422 112222222 22222 23446778999999999999999
Q ss_pred CChhHHhhhHHHHhhHh
Q 002843 574 PTTREILQSEVTNEFQE 590 (874)
Q Consensus 574 PTa~EiL~hp~~~~~~~ 590 (874)
|++.++|.||||.....
T Consensus 262 ~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 262 ATAAELLKHPFLAKAGP 278 (292)
T ss_pred cCHHHHhcChHHhccCC
Confidence 99999999999997553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-27 Score=249.72 Aligned_cols=205 Identities=15% Similarity=0.153 Sum_probs=159.0
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYI 334 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I 334 (874)
....+...++...|++++.+......+.. ..++|||++|++|.+++.. .+..+++.+++.+
T Consensus 48 ~~~~ei~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 111 (267)
T cd08224 48 DCLKEIDLLKQLDHPNVIKYLASFIENNE----------------LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKY 111 (267)
T ss_pred HHHHHHHHHHhCCCCCeeeeeeeeecCCe----------------EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHH
Confidence 34445567777788888888776553322 2469999999999999964 2336899999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||.|||+.||+||||||+||+++.++.++++|||+++......
T Consensus 112 ~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~------------------------------- 160 (267)
T cd08224 112 FVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT------------------------------- 160 (267)
T ss_pred HHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC-------------------------------
Confidence 9999999999999999999999999999999999999999876322000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
.......+
T Consensus 161 ------------------------------------------------------------------------~~~~~~~~ 168 (267)
T cd08224 161 ------------------------------------------------------------------------TAAHSLVG 168 (267)
T ss_pred ------------------------------------------------------------------------cccceecC
Confidence 00012356
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH----HHHHHhhcCCCCCCCC-CCCHHHHHHHHHccccC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA----AAMSDLRDRILPPSFL-SENPKEAGFCLWQLHPE 569 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~----~~~~~l~~~~lpp~~~-~~~p~l~dLi~~cL~~d 569 (874)
+..|+|||.+.+..++.++|||||||++|+|++|..|+.... .....+.....++... .....+.+++.+||.++
T Consensus 169 ~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~ 248 (267)
T cd08224 169 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPD 248 (267)
T ss_pred CccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCC
Confidence 788999999998889999999999999999999998874322 2233344444444333 34467899999999999
Q ss_pred CCCCCChhHHhh
Q 002843 570 PLSRPTTREILQ 581 (874)
Q Consensus 570 P~~RPTa~EiL~ 581 (874)
|++||++.+|++
T Consensus 249 p~~Rp~~~~il~ 260 (267)
T cd08224 249 PEKRPDISYVLQ 260 (267)
T ss_pred cccCCCHHHHHH
Confidence 999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=255.27 Aligned_cols=206 Identities=15% Similarity=0.198 Sum_probs=154.6
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--CCCCHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--HKGKRIECLYIFRQ 337 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~--~~lse~e~~~I~~Q 337 (874)
..+..++....|++++.+.......+. .+++|||++| +|.+++.... ..+++..++.++.|
T Consensus 46 ~~E~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~q 108 (284)
T cd07836 46 IREISLMKELKHENIVRLHDVIHTENK----------------LMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQ 108 (284)
T ss_pred HHHHHHHHhhcCCCEeeeeeeEeeCCc----------------EEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHH
Confidence 345567777789988887766553332 2579999995 9999997643 36899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+||+++.++.++++|||+++......
T Consensus 109 i~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~---------------------------------- 154 (284)
T cd07836 109 LLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV---------------------------------- 154 (284)
T ss_pred HHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc----------------------------------
Confidence 9999999999999999999999999999999999999876322000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......++..
T Consensus 155 ---------------------------------------------------------------------~~~~~~~~~~~ 165 (284)
T cd07836 155 ---------------------------------------------------------------------NTFSNEVVTLW 165 (284)
T ss_pred ---------------------------------------------------------------------ccccccccccc
Confidence 00023356789
Q ss_pred ccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH------HH-----------HHhhc-----CCCCC-----
Q 002843 498 YASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA------AM-----------SDLRD-----RILPP----- 549 (874)
Q Consensus 498 Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~------~~-----------~~l~~-----~~lpp----- 549 (874)
|+|||++.+. .++.++|||||||++|+|++|..||..... .+ ..+.. ...+.
T Consensus 166 y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (284)
T cd07836 166 YRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQD 245 (284)
T ss_pred ccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHH
Confidence 9999998764 478999999999999999999988742110 00 00110 00000
Q ss_pred ---CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 550 ---SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 550 ---~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
.+....+.+.+++.+||+.||.+||++.++++||||
T Consensus 246 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 246 LQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred HHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 011234567899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=248.23 Aligned_cols=212 Identities=19% Similarity=0.137 Sum_probs=164.0
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...++...|++++.+......+.. ...+++|||++|++|.+++.+.. .+++.+++.++.|
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--------------~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~ 109 (260)
T cd06606 45 ALEREIRILSSLQHPNIVRYYGSERDEEK--------------NTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQ 109 (260)
T ss_pred HHHHHHHHHHHcCCCCEeeEEEEEecCCC--------------CeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHH
Confidence 34445567777779998888776554320 11357999999999999998876 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
++.||.|||+.|++|+||+|+||+++.++.++|+|||.+........
T Consensus 110 l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--------------------------------- 156 (260)
T cd06606 110 ILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET--------------------------------- 156 (260)
T ss_pred HHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccc---------------------------------
Confidence 99999999999999999999999999999999999998764330000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
........++..
T Consensus 157 --------------------------------------------------------------------~~~~~~~~~~~~ 168 (260)
T cd06606 157 --------------------------------------------------------------------GEGTGSVRGTPY 168 (260)
T ss_pred --------------------------------------------------------------------cccccCCCCCcc
Confidence 000023456789
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
|+|||.+.+..++.++|||||||++|+|++|..|+.... ..+..+.. ...+.........+.+|+.+||..+|.+|
T Consensus 169 y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R 248 (260)
T cd06606 169 WMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKR 248 (260)
T ss_pred ccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhC
Confidence 999999998889999999999999999999998875432 22222322 22222222335779999999999999999
Q ss_pred CChhHHhhhHHH
Q 002843 574 PTTREILQSEVT 585 (874)
Q Consensus 574 PTa~EiL~hp~~ 585 (874)
|++.++++||||
T Consensus 249 p~~~~ll~~~~~ 260 (260)
T cd06606 249 PTADELLQHPFL 260 (260)
T ss_pred CCHHHHhhCCCC
Confidence 999999999996
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=265.09 Aligned_cols=213 Identities=15% Similarity=0.171 Sum_probs=156.7
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....|++++.+......+.... .....+++||||. ++|.+++... +++.++..++.||
T Consensus 62 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----------~~~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql 127 (353)
T cd07850 62 AYRELVLMKLVNHKNIIGLLNVFTPQKSLE----------EFQDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQM 127 (353)
T ss_pred HHHHHHHHHhcCCCCCcceeeeeccCCCcc----------ccCcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHH
Confidence 344566777888999988876543222110 0012468999997 5899988653 8999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 128 ~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~------------------------------------ 171 (353)
T cd07850 128 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS------------------------------------ 171 (353)
T ss_pred HHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC------------------------------------
Confidence 99999999999999999999999999999999999988632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......+++.|
T Consensus 172 --------------------------------------------------------------------~~~~~~~~~~~y 183 (353)
T cd07850 172 --------------------------------------------------------------------FMMTPYVVTRYY 183 (353)
T ss_pred --------------------------------------------------------------------CCCCCCcccccc
Confidence 000233567899
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhh-----------------------cCC-------
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLR-----------------------DRI------- 546 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~-----------------------~~~------- 546 (874)
+|||.+.+..++.++|||||||++|+|++|..||..... .+..+. ...
T Consensus 184 ~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (353)
T cd07850 184 RAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSF 263 (353)
T ss_pred cCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcch
Confidence 999999998899999999999999999999887632110 000000 000
Q ss_pred ---CCCC-C--------CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 547 ---LPPS-F--------LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 547 ---lpp~-~--------~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.+.. + ....+.+.+||.+||+.||++|||+.|+|+||||+..-
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~ 318 (353)
T cd07850 264 EELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWY 318 (353)
T ss_pred hhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhcc
Confidence 0000 0 01124578999999999999999999999999998533
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-27 Score=255.71 Aligned_cols=207 Identities=15% Similarity=0.172 Sum_probs=159.3
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..+++...||+++.+......+.. .+++||||. ++|.+++......+++.+++.++.||
T Consensus 68 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi 130 (313)
T cd06633 68 IIKEVKFLQQLKHPNTIEYKGCYLKEHT----------------AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGA 130 (313)
T ss_pred HHHHHHHHHhCCCCCCccEEEEEEeCCE----------------EEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 3445567777789998887776553322 257999997 58888887765579999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+|+||+|+||+++.++.+||+|||++....
T Consensus 131 ~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~-------------------------------------- 172 (313)
T cd06633 131 LQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS-------------------------------------- 172 (313)
T ss_pred HHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC--------------------------------------
Confidence 999999999999999999999999999999999999764211
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......|+..|
T Consensus 173 ---------------------------------------------------------------------~~~~~~~~~~y 183 (313)
T cd06633 173 ---------------------------------------------------------------------PANSFVGTPYW 183 (313)
T ss_pred ---------------------------------------------------------------------CCCCccccccc
Confidence 00133567889
Q ss_pred cCccccc---CCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCCCC-CCCCHHHHHHHHHccccCCCC
Q 002843 499 ASPEELS---GGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 499 ~APEvl~---g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp~~-~~~~p~l~dLi~~cL~~dP~~ 572 (874)
+|||++. ...++.++|||||||++|||++|..|+.... .....+.....+... ......+.+|+.+||+++|.+
T Consensus 184 ~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~ 263 (313)
T cd06633 184 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQE 263 (313)
T ss_pred cChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhh
Confidence 9999985 3568899999999999999999998874322 112222222222222 223356899999999999999
Q ss_pred CCChhHHhhhHHHHhhH
Q 002843 573 RPTTREILQSEVTNEFQ 589 (874)
Q Consensus 573 RPTa~EiL~hp~~~~~~ 589 (874)
||++.+++.||||...+
T Consensus 264 Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 264 RPASAELLRHDFVRRDR 280 (313)
T ss_pred CcCHHHHhcCcccCCCc
Confidence 99999999999998644
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-27 Score=250.01 Aligned_cols=205 Identities=15% Similarity=0.061 Sum_probs=154.5
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFR 336 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~ 336 (874)
....+...+....||+++.+..... .. ..+++|||+++++|.+++... +..+++..++.++.
T Consensus 47 ~~~~E~~~l~~l~~~~i~~~~~~~~-~~----------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 109 (262)
T cd05071 47 AFLQEAQVMKKLRHEKLVQLYAVVS-EE----------------PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 109 (262)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEC-CC----------------CcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHH
Confidence 3444556777778998887765421 11 125799999999999999763 33689999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||+.||+||||||+||+++.++.+||+|||+++.+.....
T Consensus 110 ~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-------------------------------- 157 (262)
T cd05071 110 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------------------------------- 157 (262)
T ss_pred HHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccc--------------------------------
Confidence 999999999999999999999999999999999999998863320000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......++.
T Consensus 158 ----------------------------------------------------------------------~~~~~~~~~~ 167 (262)
T cd05071 158 ----------------------------------------------------------------------TARQGAKFPI 167 (262)
T ss_pred ----------------------------------------------------------------------ccccCCcccc
Confidence 0001223456
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||++|||++ |..||... ......+......+........+.+|+.+||+++|++|
T Consensus 168 ~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 247 (262)
T cd05071 168 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEER 247 (262)
T ss_pred eecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccC
Confidence 8999999988889999999999999999999 77777432 22233333332223333445678999999999999999
Q ss_pred CChhHHhh
Q 002843 574 PTTREILQ 581 (874)
Q Consensus 574 PTa~EiL~ 581 (874)
|++.++++
T Consensus 248 p~~~~~~~ 255 (262)
T cd05071 248 PTFEYLQA 255 (262)
T ss_pred CCHHHHHH
Confidence 99999864
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-27 Score=249.10 Aligned_cols=203 Identities=15% Similarity=0.063 Sum_probs=154.3
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~Q 337 (874)
...+...+....|++++.+..... ... .+++|||++|++|.+++... ...+++..++.++.|
T Consensus 48 ~~~E~~~l~~l~~~~i~~~~~~~~-~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 110 (260)
T cd05070 48 FLEEAQIMKKLRHDKLVQLYAVVS-EEP----------------IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQ 110 (260)
T ss_pred HHHHHHHHHhcCCCceEEEEeEEC-CCC----------------cEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHH
Confidence 334445667778888887765422 111 25799999999999999763 336899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||+.||+||||||+||+++.++.++++|||++........
T Consensus 111 l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------- 157 (260)
T cd05070 111 VAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY--------------------------------- 157 (260)
T ss_pred HHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc---------------------------------
Confidence 99999999999999999999999999999999999998863220000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......++..
T Consensus 158 ---------------------------------------------------------------------~~~~~~~~~~~ 168 (260)
T cd05070 158 ---------------------------------------------------------------------TARQGAKFPIK 168 (260)
T ss_pred ---------------------------------------------------------------------ccccCCCCCcc
Confidence 00011234567
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.+..++.++|||||||++|||++ |..||.. .......+.....++........+.+|+.+||.++|++||
T Consensus 169 y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 248 (260)
T cd05070 169 WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERP 248 (260)
T ss_pred ccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCc
Confidence 999999988889999999999999999999 8888743 2223334444333333444557789999999999999999
Q ss_pred ChhHHh
Q 002843 575 TTREIL 580 (874)
Q Consensus 575 Ta~EiL 580 (874)
|+.+++
T Consensus 249 t~~~l~ 254 (260)
T cd05070 249 TFEYLQ 254 (260)
T ss_pred CHHHHH
Confidence 999885
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-27 Score=248.76 Aligned_cols=207 Identities=16% Similarity=0.093 Sum_probs=157.2
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....||+++.+......... .+++|||++|++|.+++......+++..++.++.|
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 108 (256)
T cd05112 45 DFIEEAQVMMKLSHPKLVQLYGVCTERSP----------------ICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLD 108 (256)
T ss_pred HHHHHHHHHHhCCCCCeeeEEEEEccCCc----------------eEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHH
Confidence 34455567777789988887665432222 25799999999999999875547899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
++.||+|||+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 109 l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--------------------------------- 155 (256)
T cd05112 109 VCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY--------------------------------- 155 (256)
T ss_pred HHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcc---------------------------------
Confidence 99999999999999999999999999999999999998763220000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......++..
T Consensus 156 ---------------------------------------------------------------------~~~~~~~~~~~ 166 (256)
T cd05112 156 ---------------------------------------------------------------------TSSTGTKFPVK 166 (256)
T ss_pred ---------------------------------------------------------------------cccCCCccchh
Confidence 00011223568
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.++.++.++|||||||++|||++ |..|+.. .......+.....+.........+.+|+.+||+.+|++||
T Consensus 167 ~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp 246 (256)
T cd05112 167 WSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRP 246 (256)
T ss_pred hcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCC
Confidence 999999998889999999999999999998 8888742 2233444443322221222356789999999999999999
Q ss_pred ChhHHhhh
Q 002843 575 TTREILQS 582 (874)
Q Consensus 575 Ta~EiL~h 582 (874)
++.++++.
T Consensus 247 ~~~~~l~~ 254 (256)
T cd05112 247 SFSLLLHQ 254 (256)
T ss_pred CHHHHHHh
Confidence 99999864
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-27 Score=255.16 Aligned_cols=207 Identities=13% Similarity=0.122 Sum_probs=153.7
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC----------CCCC
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG----------HKGK 327 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~----------~~ls 327 (874)
....+...+....|++++.+......+... +++|||++|++|.+++.... ..++
T Consensus 65 ~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 128 (296)
T cd05095 65 DFLKEIKIMSRLKDPNIIRLLAVCITSDPL----------------CMITEYMENGDLNQFLSRHEPQEAAEKADVVTIS 128 (296)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEecCCcc----------------EEEEEeCCCCcHHHHHHhcCcccccccccccccC
Confidence 344555677788899999888765543332 56999999999999997642 1477
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccc
Q 002843 328 RIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTT 407 (874)
Q Consensus 328 e~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~ 407 (874)
+..++.++.||+.||+|||++||+||||||+|||++.++.++++|||+++.+.....
T Consensus 129 ~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~----------------------- 185 (296)
T cd05095 129 YSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDY----------------------- 185 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcc-----------------------
Confidence 889999999999999999999999999999999999999999999999864320000
Q ss_pred cchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccc
Q 002843 408 GIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQST 487 (874)
Q Consensus 408 ~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~ 487 (874)
. .
T Consensus 186 ---------------------------------~---------------------------------------------~ 187 (296)
T cd05095 186 ---------------------------------Y---------------------------------------------R 187 (296)
T ss_pred ---------------------------------e---------------------------------------------e
Confidence 0 0
Q ss_pred ccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC--CCCchHHHH--HHHHHh----h---cCCCCCCCCCCCH
Q 002843 488 SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG--RFDSERALA--AAMSDL----R---DRILPPSFLSENP 556 (874)
Q Consensus 488 ~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt--G~~p~~~~~--~~~~~l----~---~~~lpp~~~~~~p 556 (874)
......++..|+|||+..++.++.++|||||||++|||++ |..|+.... ..+... . .....+......+
T Consensus 188 ~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (296)
T cd05095 188 IQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPD 267 (296)
T ss_pred ccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCH
Confidence 0012234568999999888889999999999999999998 556663211 111111 1 1111222233447
Q ss_pred HHHHHHHHccccCCCCCCChhHHhh
Q 002843 557 KEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 557 ~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
.+.+|+.+||+.||.+||++.+|++
T Consensus 268 ~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 268 SLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHH
Confidence 7899999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=267.23 Aligned_cols=240 Identities=15% Similarity=0.098 Sum_probs=179.0
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhH---HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccc
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDA---ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (874)
+|.||... ++...++.+++-..-.++... +--+.+...++...||+.|....-..-+
T Consensus 39 FGAVYfAr-----d~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre--------------- 98 (948)
T KOG0577|consen 39 FGAVYFAR-----DVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE--------------- 98 (948)
T ss_pred cceeEEee-----ccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc---------------
Confidence 46666654 233334444433344443322 2256677899999999888765432211
Q ss_pred cCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhc
Q 002843 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (874)
Q Consensus 300 ~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~ 379 (874)
...+||||||- |+-.++|.-...+|-+.++..|+.+.+.||+|||+.+.||||||..||||+..|.|||+|||.|...
T Consensus 99 -~TaWLVMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~ 176 (948)
T KOG0577|consen 99 -HTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM 176 (948)
T ss_pred -chHHHHHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhc
Confidence 11467999998 6888888766568999999999999999999999999999999999999999999999999987532
Q ss_pred cccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCc
Q 002843 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (874)
Q Consensus 380 ~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~ 459 (874)
.
T Consensus 177 ~------------------------------------------------------------------------------- 177 (948)
T KOG0577|consen 177 A------------------------------------------------------------------------------- 177 (948)
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred ccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC---CCCCCccchhHHHHHHHHhcCCCCchHHHH
Q 002843 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLFFELFGRFDSERALA 536 (874)
Q Consensus 460 ~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g---~~ys~kSDIwSLGVIL~ELltG~~p~~~~~ 536 (874)
...+.+|||+|||||++.. +.|+-++||||||+++.||...++|.....
T Consensus 178 ----------------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN 229 (948)
T KOG0577|consen 178 ----------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 229 (948)
T ss_pred ----------------------------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch
Confidence 0146799999999999874 679999999999999999999999964433
Q ss_pred H--HHHHhhcCCCCCCCCCCC-HHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 537 A--AMSDLRDRILPPSFLSEN-PKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 537 ~--~~~~l~~~~lpp~~~~~~-p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
. ++..|...--|---.+.+ ..++.|+..||.+-|..|||.+++|.|+|+..-+..
T Consensus 230 AMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~ 287 (948)
T KOG0577|consen 230 AMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPP 287 (948)
T ss_pred HHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCc
Confidence 2 233333322222223333 558999999999999999999999999998865543
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-28 Score=256.50 Aligned_cols=209 Identities=21% Similarity=0.187 Sum_probs=155.9
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYI 334 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I 334 (874)
......+...+....||+++.+.......+. .+++||||++|+|.++|... ...+++.+++.|
T Consensus 45 ~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~----------------~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i 108 (259)
T PF07714_consen 45 EEEFLNEIQILRKLRHPNIVKLYGFCIENEP----------------LFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSI 108 (259)
T ss_dssp HHHHHHHHHHHHTHSBTTBE-EEEEEESSSS----------------EEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHH
T ss_pred ceeeeeccccccccccccccccccccccccc----------------ccccccccccccccccccccccccccccccccc
Confidence 4455666677777799999999877662222 25699999999999999887 447999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||.|||+++|+|+||+|+||+++.++.+||+|||+++.......
T Consensus 109 ~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~------------------------------ 158 (259)
T PF07714_consen 109 AIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK------------------------------ 158 (259)
T ss_dssp HHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc------------------------------
Confidence 99999999999999999999999999999999999999998864310000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
. .......+
T Consensus 159 --------------------------~---------------------------------------------~~~~~~~~ 167 (259)
T PF07714_consen 159 --------------------------Y---------------------------------------------KNDSSQQL 167 (259)
T ss_dssp --------------------------E---------------------------------------------EESTTSES
T ss_pred --------------------------c---------------------------------------------cccccccc
Confidence 0 00012234
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
...|+|||.+.+..++.++||||||+++|||++ |..|+.. .......+.....++........+.+++..||+.+|.
T Consensus 168 ~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~ 247 (259)
T PF07714_consen 168 PLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPE 247 (259)
T ss_dssp GGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGG
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccchhHHHHHHHHHHcCCChh
Confidence 568999999998889999999999999999999 6677643 2233445555444444444567799999999999999
Q ss_pred CCCChhHHhh
Q 002843 572 SRPTTREILQ 581 (874)
Q Consensus 572 ~RPTa~EiL~ 581 (874)
+||++.+|++
T Consensus 248 ~RPs~~~i~~ 257 (259)
T PF07714_consen 248 KRPSFQEILQ 257 (259)
T ss_dssp GS--HHHHHH
T ss_pred hCcCHHHHHh
Confidence 9999999975
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-27 Score=250.03 Aligned_cols=209 Identities=15% Similarity=0.101 Sum_probs=158.7
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+...+....|++++.+........... .+++|||++|++|.+++...+ .+++..++.|+.||+.
T Consensus 53 ~ei~~l~~l~h~~i~~~~~~~~~~~~~~--------------~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~ 117 (264)
T cd06653 53 CEIQLLKNLRHDRIVQYYGCLRDPEEKK--------------LSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQ 117 (264)
T ss_pred HHHHHHHHcCCCCcceEEEEEEcCCCCE--------------EEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHH
Confidence 3445677778998887776543211111 246999999999999998765 6899999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||.|||++||+|+||||+||+++.++.++|+|||+++......
T Consensus 118 al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~------------------------------------- 160 (264)
T cd06653 118 GVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC------------------------------------- 160 (264)
T ss_pred HHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccccc-------------------------------------
Confidence 9999999999999999999999999999999999987432000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
.. ........|+..|+|
T Consensus 161 --------------------~~-------------------------------------------~~~~~~~~~~~~y~a 177 (264)
T cd06653 161 --------------------MS-------------------------------------------GTGIKSVTGTPYWMS 177 (264)
T ss_pred --------------------cc-------------------------------------------CccccccCCcccccC
Confidence 00 000023457889999
Q ss_pred cccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHH--HHHhhcCCCCCCCC-CCCHHHHHHHHHccccCCCCCCChh
Q 002843 501 PEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAA--MSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSRPTTR 577 (874)
Q Consensus 501 PEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~--~~~l~~~~lpp~~~-~~~p~l~dLi~~cL~~dP~~RPTa~ 577 (874)
||.+.+..++.++|||||||++|+|++|..||...... ...+.....++.++ ...+.+.+++.+||. +|..||++.
T Consensus 178 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~ 256 (264)
T cd06653 178 PEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAE 256 (264)
T ss_pred HhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHH
Confidence 99999888999999999999999999999998543221 22222222223332 344678999999999 579999999
Q ss_pred HHhhhHHH
Q 002843 578 EILQSEVT 585 (874)
Q Consensus 578 EiL~hp~~ 585 (874)
++|.|||.
T Consensus 257 ~~~~~~~~ 264 (264)
T cd06653 257 FLLRHPFV 264 (264)
T ss_pred HHhcCCCC
Confidence 99999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=253.08 Aligned_cols=206 Identities=15% Similarity=0.100 Sum_probs=161.5
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...++...||+++.+......... .+++|||+.|++|.+++.... .+++.++..|+.|
T Consensus 46 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~ 108 (258)
T cd05578 46 NVLNERRILQELNHPFLVNLWYSFQDEEN----------------MYLVVDLLLGGDLRYHLSQKV-KFSEEQVKFWICE 108 (258)
T ss_pred HHHHHHHHHHhCCCCChHHHHHhhcCCCe----------------EEEEEeCCCCCCHHHHHHhcC-CcCHHHHHHHHHH
Confidence 34455567778889998887766442222 357999999999999998774 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||++||+|+||+|+||+++.++.++++|||++.......
T Consensus 109 i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------------------------- 154 (258)
T cd05578 109 IVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---------------------------------- 154 (258)
T ss_pred HHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc----------------------------------
Confidence 9999999999999999999999999999999999999876322000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
......|+..
T Consensus 155 ----------------------------------------------------------------------~~~~~~~~~~ 164 (258)
T cd05578 155 ----------------------------------------------------------------------LTTSTSGTPG 164 (258)
T ss_pred ----------------------------------------------------------------------cccccCCChh
Confidence 0012346778
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH-----HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL-----AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~-----~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
|+|||.+.+..++.++|+|||||++|+|++|..|+... ......... ..+.........+.++|.+||..||.+
T Consensus 165 y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~ 243 (258)
T cd05578 165 YMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET-ADVLYPATWSTEAIDAINKLLERDPQK 243 (258)
T ss_pred hcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-ccccCcccCcHHHHHHHHHHccCChhH
Confidence 99999999888999999999999999999999887532 222222221 112222233467899999999999999
Q ss_pred CCCh--hHHhhhHHH
Q 002843 573 RPTT--REILQSEVT 585 (874)
Q Consensus 573 RPTa--~EiL~hp~~ 585 (874)
||++ .|+++||||
T Consensus 244 R~~~~~~~l~~~~~~ 258 (258)
T cd05578 244 RLGDNLKDLKNHPYF 258 (258)
T ss_pred cCCccHHHHhcCCCC
Confidence 9999 999999997
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-27 Score=256.24 Aligned_cols=205 Identities=15% Similarity=0.128 Sum_probs=158.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..+++...||+++.+......+.. .+++|||+. |+|.+++......+++.++..++.||
T Consensus 62 ~~~Ei~~l~~l~h~niv~~~~~~~~~~~----------------~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql 124 (307)
T cd06607 62 IIKEVRFLQQLRHPNTIEYKGCYLREHT----------------AWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGA 124 (307)
T ss_pred HHHHHHHHHhCCCCCEEEEEEEEEeCCe----------------EEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHH
Confidence 3445567788889999988776553332 256999998 58888887654479999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+||||+|+||+++.++.++|+|||+++....
T Consensus 125 ~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~------------------------------------- 167 (307)
T cd06607 125 LQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP------------------------------------- 167 (307)
T ss_pred HHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC-------------------------------------
Confidence 9999999999999999999999999999999999998752110
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.....+++.|
T Consensus 168 ----------------------------------------------------------------------~~~~~~~~~y 177 (307)
T cd06607 168 ----------------------------------------------------------------------ANSFVGTPYW 177 (307)
T ss_pred ----------------------------------------------------------------------CCCccCCccc
Confidence 0123466789
Q ss_pred cCccccc---CCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCCCC-CCCHHHHHHHHHccccCCCC
Q 002843 499 ASPEELS---GGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 499 ~APEvl~---g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~~~-~~~p~l~dLi~~cL~~dP~~ 572 (874)
+|||++. ...++.++|||||||++|||++|..|+..... ....+.....+.... .....+.+|+.+||..+|++
T Consensus 178 ~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 257 (307)
T cd06607 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQD 257 (307)
T ss_pred cCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhh
Confidence 9999885 34588999999999999999999998743221 122222222111111 23456889999999999999
Q ss_pred CCChhHHhhhHHHHh
Q 002843 573 RPTTREILQSEVTNE 587 (874)
Q Consensus 573 RPTa~EiL~hp~~~~ 587 (874)
||++.+++.||||..
T Consensus 258 Rp~~~~il~~~~~~~ 272 (307)
T cd06607 258 RPSSEELLKHRFVLR 272 (307)
T ss_pred CcCHHHHhcChhhcc
Confidence 999999999999985
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-27 Score=251.24 Aligned_cols=205 Identities=16% Similarity=0.078 Sum_probs=147.7
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC----CCCCHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG----HKGKRIECLYI 334 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~----~~lse~e~~~I 334 (874)
...+...++...|++++.+++....... .+++|||+++|+|.++|.... ..+++..++.+
T Consensus 42 ~~~e~~~~~~l~h~nii~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~ 105 (269)
T cd05042 42 FLQEVQPYRELNHPNVLQCLGQCIESIP----------------YLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRM 105 (269)
T ss_pred HHHHHHHHHhCCCCCcceEEEEECCCCc----------------eEEEEEeCCCCcHHHHHHhccccccccccHHHHHHH
Confidence 3455566777889999988876542222 257999999999999997643 13567888999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||+|||++||+||||||+|||++.++.+|++|||+++.......
T Consensus 106 ~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~------------------------------ 155 (269)
T cd05042 106 ACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY------------------------------ 155 (269)
T ss_pred HHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchh------------------------------
Confidence 99999999999999999999999999999999999999998763220000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
. .......+
T Consensus 156 --------------------------~---------------------------------------------~~~~~~~~ 164 (269)
T cd05042 156 --------------------------Y---------------------------------------------ITKDCHAV 164 (269)
T ss_pred --------------------------e---------------------------------------------eccCCCCC
Confidence 0 00012244
Q ss_pred cccccCcccccC-------CCCCCccchhHHHHHHHHhcC-CCCchHHH---HHHHHHhhcCC---CCCCCC-CCCHHHH
Q 002843 495 EKWYASPEELSG-------GVCTTSSNIYSLGVLFFELFG-RFDSERAL---AAAMSDLRDRI---LPPSFL-SENPKEA 559 (874)
Q Consensus 495 T~~Y~APEvl~g-------~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~---~~~~~~l~~~~---lpp~~~-~~~p~l~ 559 (874)
+..|+|||++.. ..++.++|||||||++|||++ |..|+... ......+.... ..+... ...+.+.
T Consensus 165 ~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (269)
T cd05042 165 PLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWY 244 (269)
T ss_pred cccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHH
Confidence 568999998753 356889999999999999998 67776332 11122222221 122222 2335577
Q ss_pred HHHHHccccCCCCCCChhHHhh
Q 002843 560 GFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 560 dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
+++..|+ .||++||++.+|++
T Consensus 245 ~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 245 EVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred HHHHHHh-cCcccccCHHHHHH
Confidence 8888888 59999999999875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=253.63 Aligned_cols=206 Identities=15% Similarity=0.136 Sum_probs=158.8
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...++...|++++.+......+.. .+++|||+.| +|.+++......+++.++..++.||
T Consensus 72 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i 134 (317)
T cd06635 72 IIKEVKFLQRIKHPNSIEYKGCYLREHT----------------AWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGA 134 (317)
T ss_pred HHHHHHHHHhCCCCCEEEEEEEEeeCCe----------------EEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 3445566777789998888776553332 2569999985 8888887655579999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+||||+|+||+++.++.+|++|||++.....
T Consensus 135 ~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~------------------------------------- 177 (317)
T cd06635 135 LQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP------------------------------------- 177 (317)
T ss_pred HHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC-------------------------------------
Confidence 9999999999999999999999999999999999998652110
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.....|++.|
T Consensus 178 ----------------------------------------------------------------------~~~~~~~~~y 187 (317)
T cd06635 178 ----------------------------------------------------------------------ANSFVGTPYW 187 (317)
T ss_pred ----------------------------------------------------------------------cccccCCccc
Confidence 0123567789
Q ss_pred cCccccc---CCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 499 ASPEELS---GGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 499 ~APEvl~---g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
+|||.+. .+.++.++|||||||++|||++|..|+.... .....+.. ...+.......+.+.+|+.+||+.+|.+
T Consensus 188 ~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 267 (317)
T cd06635 188 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQD 267 (317)
T ss_pred cChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCccc
Confidence 9999974 3568999999999999999999998874321 11222222 2222222234467899999999999999
Q ss_pred CCChhHHhhhHHHHhh
Q 002843 573 RPTTREILQSEVTNEF 588 (874)
Q Consensus 573 RPTa~EiL~hp~~~~~ 588 (874)
||++.++++|+|+-..
T Consensus 268 Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 268 RPTSEELLKHMFVLRE 283 (317)
T ss_pred CcCHHHHHhChhhhcc
Confidence 9999999999998643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-27 Score=252.32 Aligned_cols=205 Identities=18% Similarity=0.178 Sum_probs=153.0
Q ss_pred HHHHhHHhhcC-CCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHH
Q 002843 260 AAGAMMVASNA-SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQ 337 (874)
Q Consensus 260 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~Q 337 (874)
..+...+.... |++++.+......++. .+++|||+ +++|.+++.... ..+++.++..++.|
T Consensus 45 ~~e~~~l~~~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~ 107 (283)
T cd07830 45 LREVKSLRKLNEHPNIVKLKEVFRENDE----------------LYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQ 107 (283)
T ss_pred HHHHHHHHhccCCCCchhHHHHhhcCCc----------------EEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHH
Confidence 33444455555 8888887776554322 25799999 789999997653 47899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.+|.|||++||+|+||+|+||+++.++.++|+|||+++.....
T Consensus 108 l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~----------------------------------- 152 (283)
T cd07830 108 ILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR----------------------------------- 152 (283)
T ss_pred HHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC-----------------------------------
Confidence 999999999999999999999999999999999999987632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......++..
T Consensus 153 ---------------------------------------------------------------------~~~~~~~~~~~ 163 (283)
T cd07830 153 ---------------------------------------------------------------------PPYTDYVSTRW 163 (283)
T ss_pred ---------------------------------------------------------------------CCcCCCCCccc
Confidence 00023456789
Q ss_pred ccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhh---c------------------CCCC-----
Q 002843 498 YASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLR---D------------------RILP----- 548 (874)
Q Consensus 498 Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~---~------------------~~lp----- 548 (874)
|+|||++.+ ..++.++|||||||++|||++|.+||..... ....+. . ..++
T Consensus 164 ~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (283)
T cd07830 164 YRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPT 243 (283)
T ss_pred ccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccc
Confidence 999998865 4478999999999999999999887732110 000000 0 0000
Q ss_pred ---CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 549 ---PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 549 ---p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
..+....+.+.+|+.+||..+|++|||+.|++.||||
T Consensus 244 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 244 SLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 0112234678899999999999999999999999996
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-27 Score=267.82 Aligned_cols=157 Identities=11% Similarity=0.119 Sum_probs=120.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhh
Q 002843 325 KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEM 404 (874)
Q Consensus 325 ~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~d 404 (874)
.+++..++.|+.||+.||+|||+.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 235 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~-------------------- 294 (401)
T cd05107 235 ALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSN-------------------- 294 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccc--------------------
Confidence 367778899999999999999999999999999999999999999999999864320000
Q ss_pred ccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccc
Q 002843 405 FTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQ 484 (874)
Q Consensus 405 fg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~ 484 (874)
T Consensus 295 -------------------------------------------------------------------------------- 294 (401)
T cd05107 295 -------------------------------------------------------------------------------- 294 (401)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH---HHHHHHHhhcCCCCCCCCCCCHHHHH
Q 002843 485 QSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA---LAAAMSDLRDRILPPSFLSENPKEAG 560 (874)
Q Consensus 485 ~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~---~~~~~~~l~~~~lpp~~~~~~p~l~d 560 (874)
........++..|+|||.+.+..++.++|||||||++|||++ |..|+.. .......+.....++........+.+
T Consensus 295 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~ 373 (401)
T cd05107 295 -YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYE 373 (401)
T ss_pred -cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 000012356788999999998889999999999999999998 7777632 11122233333222223334578999
Q ss_pred HHHHccccCCCCCCChhHHhhh
Q 002843 561 FCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 561 Li~~cL~~dP~~RPTa~EiL~h 582 (874)
|+.+||+++|.+||++.+|++.
T Consensus 374 li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 374 IMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHcCCChhHCcCHHHHHHH
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=264.60 Aligned_cols=216 Identities=17% Similarity=0.205 Sum_probs=162.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+.+....+..... ....+++|||+ |++|.+++... .+++..++.++.||
T Consensus 61 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~----------~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi 127 (343)
T cd07880 61 AYRELRLLKHMKHENVIGLLDVFTPDLSLDR----------FHDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQM 127 (343)
T ss_pred HHHHHHHHHhcCCCCccceeeeecCCccccc----------cceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHH
Confidence 4456677888899999888776553332210 01136899999 78999998754 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||+.||+||||||+||+++.++.++++|||+++.....
T Consensus 128 ~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~------------------------------------ 171 (343)
T cd07880 128 LKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE------------------------------------ 171 (343)
T ss_pred HHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC------------------------------------
Confidence 99999999999999999999999999999999999987632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.....++++|
T Consensus 172 ----------------------------------------------------------------------~~~~~~~~~y 181 (343)
T cd07880 172 ----------------------------------------------------------------------MTGYVVTRWY 181 (343)
T ss_pred ----------------------------------------------------------------------ccccccCCcc
Confidence 0123457899
Q ss_pred cCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhcC-------------------------CCCC
Q 002843 499 ASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRDR-------------------------ILPP 549 (874)
Q Consensus 499 ~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~~-------------------------~lpp 549 (874)
+|||.+.+ ..++.++|||||||++|+|++|..||.... .....+... ..+.
T Consensus 182 ~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (343)
T cd07880 182 RAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKK 261 (343)
T ss_pred cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcc
Confidence 99999876 358899999999999999999998874211 111100000 0000
Q ss_pred C----CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhhh
Q 002843 550 S----FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA 593 (874)
Q Consensus 550 ~----~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~~ 593 (874)
. .....+.+.++|.+||+.||++|||+.+++.||||+.......
T Consensus 262 ~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~ 309 (343)
T cd07880 262 DFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPED 309 (343)
T ss_pred hHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCccc
Confidence 1 1234566889999999999999999999999999998766543
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.6e-28 Score=253.38 Aligned_cols=266 Identities=12% Similarity=0.167 Sum_probs=193.2
Q ss_pred chhHH-HHhhcCCceEEEecCCCCccc-ccccccccccccccCCChhHHHHHHH-HhHHhhcCCCCCceeccceeecCcc
Q 002843 211 FSEFF-VKTTLKGKGIVCRGPPLNAFK-ERRGMIDTKAFVTTTMPSDAALKAAG-AMMVASNASPKPVGVGTAVVSNGSL 287 (874)
Q Consensus 211 f~e~~-~~~~~kgkGvv~kg~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~ 287 (874)
|-+++ +...+-|.|.-.+-. .+. -.-...-+++.|...-.-.+.+-+.+ .++-.-..|+++++++.-...+.+.
T Consensus 75 F~d~YkLt~e~LGeGAyasVq---tcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~F 151 (463)
T KOG0607|consen 75 FEDMYKLTSELLGEGAYASVQ---TCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRF 151 (463)
T ss_pred HHHHHHhHHHHhcCccceeee---eeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceE
Confidence 66532 335566766543332 111 11233334445555433444554444 4666667789999999988888887
Q ss_pred cCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCc
Q 002843 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (874)
Q Consensus 288 ~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~ 367 (874)
++ |||-|.||+|...|.++. .|++.++..+.+.|+.||+|||.+||.||||||+|||-...+.
T Consensus 152 YL----------------VfEKm~GGplLshI~~~~-~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~ 214 (463)
T KOG0607|consen 152 YL----------------VFEKMRGGPLLSHIQKRK-HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNK 214 (463)
T ss_pred EE----------------EEecccCchHHHHHHHhh-hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCC
Confidence 75 999999999999998876 7999999999999999999999999999999999999987655
Q ss_pred ---EEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCcccccccc
Q 002843 368 ---VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (874)
Q Consensus 368 ---vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~ 444 (874)
+|||||.+..-+. ++..
T Consensus 215 vsPvKiCDfDLgSg~k------------------------------------~~~~------------------------ 234 (463)
T KOG0607|consen 215 VSPVKICDFDLGSGIK------------------------------------LNND------------------------ 234 (463)
T ss_pred cCceeeeccccccccc------------------------------------cCCC------------------------
Confidence 8999998764211 1000
Q ss_pred ccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccccc---C--CCCCCccchhHHH
Q 002843 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS---G--GVCTTSSNIYSLG 519 (874)
Q Consensus 445 ~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~---g--~~ys~kSDIwSLG 519 (874)
|. .-.++.+.+.+|+..|||||+.. + ..|+.++|.||||
T Consensus 235 ----------------------------------~s--pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLG 278 (463)
T KOG0607|consen 235 ----------------------------------CS--PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLG 278 (463)
T ss_pred ----------------------------------CC--CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHH
Confidence 00 01123346789999999999764 2 2489999999999
Q ss_pred HHHHHhcCCCCchHH-----------------HHHHHHHhhcCCC---CCCCCCCCHHHHHHHHHccccCCCCCCChhHH
Q 002843 520 VLFFELFGRFDSERA-----------------LAAAMSDLRDRIL---PPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (874)
Q Consensus 520 VIL~ELltG~~p~~~-----------------~~~~~~~l~~~~l---pp~~~~~~p~l~dLi~~cL~~dP~~RPTa~Ei 579 (874)
||||-||+|++||.. ....+..|.++.. ...|...+....+++..+|..+|.+|.++.++
T Consensus 279 vIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~v 358 (463)
T KOG0607|consen 279 VILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQV 358 (463)
T ss_pred HHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhc
Confidence 999999999999832 2233455555432 23455556778899999999999999999999
Q ss_pred hhhHHHHhhHhhh
Q 002843 580 LQSEVTNEFQEVC 592 (874)
Q Consensus 580 L~hp~~~~~~~~~ 592 (874)
|+|||++......
T Consensus 359 lnhPw~~~~~~ek 371 (463)
T KOG0607|consen 359 LNHPWVQRCAPEK 371 (463)
T ss_pred cCCccccccchhc
Confidence 9999999876553
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.6e-28 Score=273.65 Aligned_cols=210 Identities=21% Similarity=0.221 Sum_probs=176.0
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...+.+..||+||+++.......+.+ +||||+.||.|++||.+++ .+.+.++..+|.|+
T Consensus 102 ~~rev~imk~l~HPnIvkl~~v~~t~~~ly----------------lV~eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~ 164 (596)
T KOG0586|consen 102 LGREVDIMKSLNHPNIVKLFSVIETEATLY----------------LVMEYASGGELFDYLVKHG-RMKEKEARAKFRQI 164 (596)
T ss_pred HHHHHHHHHhcCCcceeeeeeeeeecceeE----------------EEEEeccCchhHHHHHhcc-cchhhhhhhhhHHH
Confidence 566778889999999999998877666655 4999999999999999988 67789999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||+++|||||||++||||+.+.++||+|||++..+...
T Consensus 165 vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~------------------------------------ 208 (596)
T KOG0586|consen 165 VSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG------------------------------------ 208 (596)
T ss_pred HHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc------------------------------------
Confidence 99999999999999999999999999999999999987643300
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
..+.+.+|++.|
T Consensus 209 --------------------------------------------------------------------~~lqt~cgsppy 220 (596)
T KOG0586|consen 209 --------------------------------------------------------------------LMLQTFCGSPPY 220 (596)
T ss_pred --------------------------------------------------------------------ccccccCCCCCc
Confidence 001366899999
Q ss_pred cCcccccCCCC-CCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCCC---CCCHHHHHHHHHccccCCCCCC
Q 002843 499 ASPEELSGGVC-TTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFL---SENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 499 ~APEvl~g~~y-s~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~~---~~~p~l~dLi~~cL~~dP~~RP 574 (874)
.|||++.|..| ++.+|+||+||+||-|++|.-||+... +..++++.+...+. ..+....++|.++|.++|.+|+
T Consensus 221 AaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~--lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~ 298 (596)
T KOG0586|consen 221 AAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN--LKELRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRG 298 (596)
T ss_pred cChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc--cccccchheeeeecccceeechhHHHHHHhhccCccccC
Confidence 99999999887 689999999999999999999998544 45555544433322 1234566899999999999999
Q ss_pred ChhHHhhhHHHHhhHhh
Q 002843 575 TTREILQSEVTNEFQEV 591 (874)
Q Consensus 575 Ta~EiL~hp~~~~~~~~ 591 (874)
+..+++.|.|++...+.
T Consensus 299 ~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 299 PCDQIMKDRWRNDLLEA 315 (596)
T ss_pred CHHHhhhhcccchhhhh
Confidence 99999999999976655
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=294.71 Aligned_cols=210 Identities=18% Similarity=0.186 Sum_probs=170.9
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
..+....|||+|..+..-+++-..++ .||||+||+|.+++...+ ..++.....+-.|++.||+
T Consensus 1286 ~vlE~lnHpNlV~YyGVEvHRekv~I----------------FMEyC~~GsLa~ll~~gr-i~dE~vt~vyt~qll~gla 1348 (1509)
T KOG4645|consen 1286 KVLEGLNHPNLVRYYGVEVHREKVYI----------------FMEYCEGGSLASLLEHGR-IEDEMVTRVYTKQLLEGLA 1348 (1509)
T ss_pred HHHHhccCccccccCceeecHHHHHH----------------HHHHhccCcHHHHHHhcc-hhhhhHHHHHHHHHHHHHH
Confidence 45667789999998888776655554 799999999999997765 6888888999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
|||++|||||||||.||+|+.+|-+|+.|||.|..+....
T Consensus 1349 ~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~---------------------------------------- 1388 (1509)
T KOG4645|consen 1349 YLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA---------------------------------------- 1388 (1509)
T ss_pred HHHhcCceecCCCccceeeecCCcEEeecccceeEecCch----------------------------------------
Confidence 9999999999999999999999999999999987554100
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
+++ | ..+...+||+.|||||+
T Consensus 1389 ---------------~~~----------------------------------~----------~el~~~~GT~~YMAPEv 1409 (1509)
T KOG4645|consen 1389 ---------------QTM----------------------------------P----------GELQSMMGTPMYMAPEV 1409 (1509)
T ss_pred ---------------hcC----------------------------------C----------HHHHhhcCCchhcCchh
Confidence 000 0 11246799999999999
Q ss_pred ccCCC---CCCccchhHHHHHHHHhcCCCCchHHHHH---HHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChh
Q 002843 504 LSGGV---CTTSSNIYSLGVLFFELFGRFDSERALAA---AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (874)
Q Consensus 504 l~g~~---ys~kSDIwSLGVIL~ELltG~~p~~~~~~---~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~ 577 (874)
+.+.. -.-++||||||||..||+||+.||..... .|.++..+..|+.....++...+||..||..||+.|-++.
T Consensus 1410 it~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~ 1489 (1509)
T KOG4645|consen 1410 ITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTAS 1489 (1509)
T ss_pred hcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHH
Confidence 98743 45799999999999999999999965443 4555555666655555778889999999999999999999
Q ss_pred HHhhhHHHHhhH
Q 002843 578 EILQSEVTNEFQ 589 (874)
Q Consensus 578 EiL~hp~~~~~~ 589 (874)
|+|+|-|-+.-.
T Consensus 1490 qlle~~f~~~~~ 1501 (1509)
T KOG4645|consen 1490 QLLEHAFGKSCT 1501 (1509)
T ss_pred HHHHhhcccccc
Confidence 999998866433
|
|
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=261.26 Aligned_cols=207 Identities=17% Similarity=0.153 Sum_probs=156.4
Q ss_pred HHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--------------
Q 002843 259 KAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-------------- 323 (874)
Q Consensus 259 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-------------- 323 (874)
...+..++... .|++++.+......++.. +++|||+++++|.++|.+..
T Consensus 64 ~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~ 127 (334)
T cd05100 64 LVSEMEMMKMIGKHKNIINLLGACTQDGPL----------------YVLVEYASKGNLREYLRARRPPGMDYSFDTCKLP 127 (334)
T ss_pred HHHHHHHHHhhcCCCCeeeeeEEEccCCce----------------EEEEecCCCCcHHHHHHhcCCcccccccccccCc
Confidence 33444455554 799998887765533322 46999999999999997532
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchh
Q 002843 324 -HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEE 402 (874)
Q Consensus 324 -~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei 402 (874)
..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 128 ~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------ 189 (334)
T cd05100 128 EEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY------------------ 189 (334)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccc------------------
Confidence 2478889999999999999999999999999999999999999999999999874330000
Q ss_pred hhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccc
Q 002843 403 EMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTA 482 (874)
Q Consensus 403 ~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~ 482 (874)
.
T Consensus 190 ----------------------------------------------------------------------------~--- 190 (334)
T cd05100 190 ----------------------------------------------------------------------------Y--- 190 (334)
T ss_pred ----------------------------------------------------------------------------c---
Confidence 0
Q ss_pred cccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHH
Q 002843 483 QQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEA 559 (874)
Q Consensus 483 ~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~ 559 (874)
.......++..|+|||++.+..++.++|||||||+||||++ |..||.. .......+.....++........+.
T Consensus 191 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 266 (334)
T cd05100 191 ----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELY 266 (334)
T ss_pred ----ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHH
Confidence 00012233467999999998889999999999999999998 7777632 2233334444433333344557789
Q ss_pred HHHHHccccCCCCCCChhHHhhh
Q 002843 560 GFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 560 dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+|+.+||+.+|.+||++.|++++
T Consensus 267 ~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 267 MIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHcccChhhCcCHHHHHHH
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-27 Score=246.10 Aligned_cols=207 Identities=18% Similarity=0.183 Sum_probs=160.8
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....|++++.+......... .+++|||++|++|.+++...+ .+++..+..++.||
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i 108 (254)
T cd06627 46 IMQEIDLLKNLKHPNIVKYIGSIETSDS----------------LYIILEYAENGSLRQIIKKFG-PFPESLVAVYVYQV 108 (254)
T ss_pred HHHHHHHHHhCCCCCccEEEEEEEeCCE----------------EEEEEecCCCCcHHHHHHhcc-CCCHHHHHHHHHHH
Confidence 4445556666778887776655442221 257999999999999998775 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||+.||+||||||+||+++.++.++|+|||++........
T Consensus 109 ~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------------------------- 154 (254)
T cd06627 109 LQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK---------------------------------- 154 (254)
T ss_pred HHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc----------------------------------
Confidence 9999999999999999999999999999999999998864330000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......++..|
T Consensus 155 ---------------------------------------------------------------------~~~~~~~~~~y 165 (254)
T cd06627 155 ---------------------------------------------------------------------DDASVVGTPYW 165 (254)
T ss_pred ---------------------------------------------------------------------cccccccchhh
Confidence 00133567799
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa 576 (874)
+|||.+.+..++.++||||||+++|+|++|..|+..... .+..+.....++........+.+++.+||..+|++||++
T Consensus 166 ~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~ 245 (254)
T cd06627 166 MAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTA 245 (254)
T ss_pred cCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCH
Confidence 999999887789999999999999999999988743221 122222222232223345678999999999999999999
Q ss_pred hHHhhhHHH
Q 002843 577 REILQSEVT 585 (874)
Q Consensus 577 ~EiL~hp~~ 585 (874)
.+++.||||
T Consensus 246 ~~~l~~~~~ 254 (254)
T cd06627 246 KQLLKHPWI 254 (254)
T ss_pred HHHhcCCCC
Confidence 999999996
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-27 Score=254.08 Aligned_cols=212 Identities=18% Similarity=0.212 Sum_probs=157.7
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQI 338 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QI 338 (874)
..+...+....||+++.+......+.. .+++|||++ ++|.+++.... ..+++..+..++.||
T Consensus 49 ~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi 111 (294)
T PLN00009 49 IREISLLKEMQHGNIVRLQDVVHSEKR----------------LYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQI 111 (294)
T ss_pred HHHHHHHHhccCCCEeeEEEEEecCCe----------------EEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHH
Confidence 345567777789999988877653332 256999997 58888886543 246889999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEec-CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~-~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
+.||+|||++||+||||||+||+++. ++.+|++|||+++.....
T Consensus 112 ~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~----------------------------------- 156 (294)
T PLN00009 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP----------------------------------- 156 (294)
T ss_pred HHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC-----------------------------------
Confidence 99999999999999999999999985 457999999988633200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
....+...+++.
T Consensus 157 --------------------------------------------------------------------~~~~~~~~~~~~ 168 (294)
T PLN00009 157 --------------------------------------------------------------------VRTFTHEVVTLW 168 (294)
T ss_pred --------------------------------------------------------------------ccccccCceeec
Confidence 000023356789
Q ss_pred ccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhh---cC-------------------CCCCC-
Q 002843 498 YASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLR---DR-------------------ILPPS- 550 (874)
Q Consensus 498 Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~---~~-------------------~lpp~- 550 (874)
|+|||.+.+. .++.++|||||||++|+|++|.+||... ......+. .. ..++.
T Consensus 169 y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (294)
T PLN00009 169 YRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKD 248 (294)
T ss_pred ccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCC
Confidence 9999998764 5789999999999999999999887321 11111110 00 00000
Q ss_pred ----CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 551 ----FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 551 ----~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
.....+.+.+|+.+||+.+|++||++.++|+||||.+.++.
T Consensus 249 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~~ 293 (294)
T PLN00009 249 LATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGDA 293 (294)
T ss_pred HHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhcC
Confidence 12345678899999999999999999999999999987653
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=256.35 Aligned_cols=208 Identities=15% Similarity=0.168 Sum_probs=156.3
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...+....|++++.+......+.. .+++|||++++.|..++.+.. .+++.++..++.||
T Consensus 47 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~iv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i 109 (288)
T cd07833 47 ALREVKVLRQLRHENIVNLKEAFRRKGR----------------LYLVFEYVERTLLELLEASPG-GLPPDAVRSYIWQL 109 (288)
T ss_pred HHHHHHHHHhcCCCCeeehhheEEECCE----------------EEEEEecCCCCHHHHHHhcCC-CCCHHHHHHHHHHH
Confidence 3445566667779988888777654332 256999999877776665544 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+||||+|+||+++.++.+||+|||++........
T Consensus 110 ~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~---------------------------------- 155 (288)
T cd07833 110 LQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA---------------------------------- 155 (288)
T ss_pred HHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc----------------------------------
Confidence 9999999999999999999999999999999999998764320000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......++.+|
T Consensus 156 --------------------------------------------------------------------~~~~~~~~~~~~ 167 (288)
T cd07833 156 --------------------------------------------------------------------SPLTDYVATRWY 167 (288)
T ss_pred --------------------------------------------------------------------ccccCcccccCC
Confidence 000234677899
Q ss_pred cCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHH---HHHH--HHhhcC------------------CCCC-----
Q 002843 499 ASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERAL---AAAM--SDLRDR------------------ILPP----- 549 (874)
Q Consensus 499 ~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~--~~l~~~------------------~lpp----- 549 (874)
+|||++.+. .++.++|||||||++|+|++|.+|+... .... ...... .+++
T Consensus 168 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (288)
T cd07833 168 RAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPE 247 (288)
T ss_pred cCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcH
Confidence 999999988 7899999999999999999998876321 1100 000000 0000
Q ss_pred ----CCCCC-CHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 550 ----SFLSE-NPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 550 ----~~~~~-~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
.+... .+.+.+|+.+||.++|++||++.+++.||||
T Consensus 248 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 248 SLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred HHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 11112 4668899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-27 Score=249.67 Aligned_cols=206 Identities=16% Similarity=0.067 Sum_probs=149.3
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC----CCCCHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG----HKGKRIECLY 333 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~----~~lse~e~~~ 333 (874)
....+...+....||+++.+......... .+++|||++||+|.++|.... ..+++..++.
T Consensus 41 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~ 104 (269)
T cd05087 41 KFLEEAQPYRSLQHSNLLQCLGQCTEVTP----------------YLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQR 104 (269)
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEcCCCC----------------cEEEEECCCCCcHHHHHHHhhhcccccccHHHHHH
Confidence 34556677888889999888765442222 257999999999999997532 2467778889
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
++.||+.||+|||+.||+||||||+||+++.++.+|++|||+++.......
T Consensus 105 ~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~----------------------------- 155 (269)
T cd05087 105 MACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY----------------------------- 155 (269)
T ss_pred HHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcce-----------------------------
Confidence 999999999999999999999999999999999999999998753220000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
. .......
T Consensus 156 -----------------------------------------------------------------~-------~~~~~~~ 163 (269)
T cd05087 156 -----------------------------------------------------------------Y-------VTPDQLW 163 (269)
T ss_pred -----------------------------------------------------------------e-------ecCCCcC
Confidence 0 0002345
Q ss_pred ccccccCcccccCC-------CCCCccchhHHHHHHHHhcC-CCCchHHH---HHHHHHhhc---CCCCCCCC-CCCHHH
Q 002843 494 EEKWYASPEELSGG-------VCTTSSNIYSLGVLFFELFG-RFDSERAL---AAAMSDLRD---RILPPSFL-SENPKE 558 (874)
Q Consensus 494 GT~~Y~APEvl~g~-------~ys~kSDIwSLGVIL~ELlt-G~~p~~~~---~~~~~~l~~---~~lpp~~~-~~~p~l 558 (874)
|+..|+|||++.+. .++.++|||||||++|||++ |..||... ......+.. ....+... .....+
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (269)
T cd05087 164 VPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRW 243 (269)
T ss_pred CcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHH
Confidence 67789999998642 35789999999999999996 98887421 111111221 11222222 344668
Q ss_pred HHHHHHccccCCCCCCChhHHhh
Q 002843 559 AGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 559 ~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
.+++..|+ .+|++|||+.||+.
T Consensus 244 ~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 244 YEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred HHHHHHHh-cCcccCCCHHHHHH
Confidence 89999998 68999999999974
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-27 Score=259.65 Aligned_cols=218 Identities=15% Similarity=0.192 Sum_probs=157.3
Q ss_pred HHHhHHhh-cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 261 AGAMMVAS-NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 261 ~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
.+...+.. ..||+++.+......... .....+++|||+. ++|.+++.... .+++.+++.++.||+
T Consensus 50 ~E~~~l~~l~~h~~iv~~~~~~~~~~~------------~~~~~~~~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~ 115 (332)
T cd07857 50 RELKLLRHFRGHKNITCLYDMDIVFPG------------NFNELYLYEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQIL 115 (332)
T ss_pred HHHHHHHHhcCCCChheeeeeeeeccc------------cCCcEEEEEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHH
Confidence 34334443 468988887765331110 0011357899987 69999997655 799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 116 ~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~----------------------------------- 160 (332)
T cd07857 116 CGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPG----------------------------------- 160 (332)
T ss_pred HHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccc-----------------------------------
Confidence 999999999999999999999999999999999999874330000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
+ ........+||..|+
T Consensus 161 -----------------------------------------------------------~-----~~~~~~~~~g~~~y~ 176 (332)
T cd07857 161 -----------------------------------------------------------E-----NAGFMTEYVATRWYR 176 (332)
T ss_pred -----------------------------------------------------------c-----ccccccCcccCcccc
Confidence 0 000012457889999
Q ss_pred CcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHH---------------Hh---------hc------CC
Q 002843 500 SPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMS---------------DL---------RD------RI 546 (874)
Q Consensus 500 APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~---------------~l---------~~------~~ 546 (874)
|||.+.+ ..++.++|||||||++|+|++|.+||.... ..+. .+ .. ..
T Consensus 177 aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (332)
T cd07857 177 APEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKP 256 (332)
T ss_pred CcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcc
Confidence 9998876 468999999999999999999988873211 0000 00 00 00
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 547 LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 547 lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
++.......+.+.+|+.+||+++|++|||+.+++.|||+....+.
T Consensus 257 ~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~ 301 (332)
T cd07857 257 FESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDP 301 (332)
T ss_pred hHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCc
Confidence 111122345678999999999999999999999999999876543
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=260.45 Aligned_cols=222 Identities=16% Similarity=0.166 Sum_probs=164.7
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....|++++.+......... .+....+++|||+. ++|.+++.+.. .+++..++.++.|
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-----------~~~~~~~lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~ 111 (330)
T cd07834 45 RILREIKLLRHLRHENIIGLLDILRPPSP-----------EDFNDVYIVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQ 111 (330)
T ss_pred hHHHHHHHHHhcCCcchhhhhhhhcccCc-----------ccccceEEEecchh-hhHHHHHhCCC-CCCHHHHHHHHHH
Confidence 34455566777778888877765442221 01112368999998 58999998766 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.++|+|||++........
T Consensus 112 l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~--------------------------------- 158 (330)
T cd07834 112 ILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED--------------------------------- 158 (330)
T ss_pred HHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc---------------------------------
Confidence 99999999999999999999999999999999999998864330000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.........++++
T Consensus 159 -------------------------------------------------------------------~~~~~~~~~~~~~ 171 (330)
T cd07834 159 -------------------------------------------------------------------EKGFLTEYVVTRW 171 (330)
T ss_pred -------------------------------------------------------------------ccccccccccccC
Confidence 0000124467889
Q ss_pred ccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhc--CCC-------------------------
Q 002843 498 YASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRD--RIL------------------------- 547 (874)
Q Consensus 498 Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~--~~l------------------------- 547 (874)
|+|||++.+. .++.++|||||||++|+|++|.+||..... .+..+.. +..
T Consensus 172 y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (330)
T cd07834 172 YRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPK 251 (330)
T ss_pred cCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCc
Confidence 9999999987 789999999999999999999988732111 1111111 000
Q ss_pred ---CCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 548 ---PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 548 ---pp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
...+....+.+.+||.+||.++|.+||++.++|+||||+......
T Consensus 252 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~ 299 (330)
T cd07834 252 KPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPE 299 (330)
T ss_pred chhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccc
Confidence 001122456788999999999999999999999999999877653
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-27 Score=254.87 Aligned_cols=206 Identities=15% Similarity=0.122 Sum_probs=153.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-----------CCCC
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-----------HKGK 327 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-----------~~ls 327 (874)
...+...+....|++++.+.+....+.. .+++||||.|++|.+++.... ..++
T Consensus 64 ~~~ei~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 127 (295)
T cd05097 64 FLKEIKIMSRLKNPNIIRLLGVCVSDDP----------------LCMITEYMENGDLNQFLSQREIESTFTHANNIPSVS 127 (295)
T ss_pred HHHHHHHHHhCCCCCcCeEEEEEcCCCc----------------cEEEEecCCCCcHHHHHHhccccccccccccCCccc
Confidence 3445567778889998888777553332 257999999999999996532 1378
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccc
Q 002843 328 RIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTT 407 (874)
Q Consensus 328 e~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~ 407 (874)
+..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 128 ~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~----------------------- 184 (295)
T cd05097 128 IANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY----------------------- 184 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcc-----------------------
Confidence 899999999999999999999999999999999999999999999998864320000
Q ss_pred cchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccc
Q 002843 408 GIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQST 487 (874)
Q Consensus 408 ~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~ 487 (874)
..
T Consensus 185 ------------------------------------------------------------------------------~~ 186 (295)
T cd05097 185 ------------------------------------------------------------------------------YR 186 (295)
T ss_pred ------------------------------------------------------------------------------ee
Confidence 00
Q ss_pred ccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC--CCCchHHH--HHHHHHh----h---cCCCCCCCCCCCH
Q 002843 488 SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG--RFDSERAL--AAAMSDL----R---DRILPPSFLSENP 556 (874)
Q Consensus 488 ~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt--G~~p~~~~--~~~~~~l----~---~~~lpp~~~~~~p 556 (874)
......++..|+|||++.++.++.++|||||||++|||++ +..||... ......+ . ............+
T Consensus 187 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (295)
T cd05097 187 IQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPS 266 (295)
T ss_pred ccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCH
Confidence 0012345678999999998889999999999999999988 45565321 1111111 1 1111222223457
Q ss_pred HHHHHHHHccccCCCCCCChhHHhh
Q 002843 557 KEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 557 ~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
.+.+|+.+||..+|++||++.+|++
T Consensus 267 ~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 267 PVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHH
Confidence 7999999999999999999999964
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=254.89 Aligned_cols=206 Identities=17% Similarity=0.171 Sum_probs=153.5
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQI 338 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QI 338 (874)
..+...+....||+++.+......+.. .+++|||++ ++|.+++.... ..+++..++.++.||
T Consensus 46 ~~E~~~l~~l~~~~iv~~~~~~~~~~~----------------~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i 108 (283)
T cd07835 46 IREISLLKELNHPNIVRLLDVVHSENK----------------LYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQL 108 (283)
T ss_pred HHHHHHHHhcCCCCccCHhheeccCCe----------------EEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHH
Confidence 334456666778888877766442221 357999996 69999997643 368999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||+++++||||+|+||+++.++.++|+|||+++.....
T Consensus 109 ~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~------------------------------------ 152 (283)
T cd07835 109 LQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVP------------------------------------ 152 (283)
T ss_pred HHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCC------------------------------------
Confidence 99999999999999999999999999999999999987632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
. .......++..|
T Consensus 153 ---------------------~----------------------------------------------~~~~~~~~~~~~ 165 (283)
T cd07835 153 ---------------------V----------------------------------------------RTYTHEVVTLWY 165 (283)
T ss_pred ---------------------c----------------------------------------------cccCccccccCC
Confidence 0 000123457899
Q ss_pred cCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH---HHHHhhc--------------------C-------CC
Q 002843 499 ASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA---AMSDLRD--------------------R-------IL 547 (874)
Q Consensus 499 ~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~---~~~~l~~--------------------~-------~l 547 (874)
+|||++.+. .++.++|||||||++|+|++|.+||..... ....++. . ..
T Consensus 166 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (283)
T cd07835 166 RAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDL 245 (283)
T ss_pred CCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccch
Confidence 999988764 478999999999999999999988732111 1111100 0 00
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 548 PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 548 pp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
........+.+.++|.+||.++|.+|||+.|++.||||
T Consensus 246 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 246 SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 01112334678899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-27 Score=247.25 Aligned_cols=206 Identities=21% Similarity=0.178 Sum_probs=161.6
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC---CCCCCHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIF 335 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~---~~~lse~e~~~I~ 335 (874)
...+..+++...|++++.+......+.. .+++|||++|++|.+++.+. +..+++..++.++
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T cd08530 46 AVNEIRILASVNHPNIISYKEAFLDGNK----------------LCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIF 109 (256)
T ss_pred HHHHHHHHHhCCCCCchhhhhhhccCCE----------------EEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 3445566777778888877655442211 35799999999999999662 2368999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
.||+.||+|||+.|++|+||+|+||+++.++.+|++|||+++.....
T Consensus 110 ~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--------------------------------- 156 (256)
T cd08530 110 IQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--------------------------------- 156 (256)
T ss_pred HHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---------------------------------
Confidence 99999999999999999999999999999999999999988643200
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
. .....++
T Consensus 157 -------------------------~-----------------------------------------------~~~~~~~ 164 (256)
T cd08530 157 -------------------------M-----------------------------------------------AKTQIGT 164 (256)
T ss_pred -------------------------C-----------------------------------------------cccccCC
Confidence 0 0123467
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
+.|+|||.+.+..++.++|+||||+++|||++|+.|+.... .....+.....++........+.+++.+||+.+|.+|
T Consensus 165 ~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 244 (256)
T cd08530 165 PHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLR 244 (256)
T ss_pred ccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccC
Confidence 78999999998889999999999999999999999874322 1223333344444434455778999999999999999
Q ss_pred CChhHHhhhHHH
Q 002843 574 PTTREILQSEVT 585 (874)
Q Consensus 574 PTa~EiL~hp~~ 585 (874)
|++.++|+||++
T Consensus 245 p~~~~~l~~p~~ 256 (256)
T cd08530 245 PNCDKILASPAV 256 (256)
T ss_pred CCHHHHhcCCCC
Confidence 999999999974
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=260.20 Aligned_cols=225 Identities=16% Similarity=0.155 Sum_probs=158.3
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..++....|++++.+........... .....-.+++|||+. ++|..++......+++.+++.++.||+
T Consensus 55 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--------~~~~~~~~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~ 125 (311)
T cd07866 55 LREIKILKKLKHPNVVPLIDMAVERPDKS--------KRKRGSVYMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLL 125 (311)
T ss_pred HHHHHHHHhcCCCCccchhhheecccccc--------cccCceEEEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHH
Confidence 34556777788999988876544222110 000111367999998 478888876555799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||++||+|+||||+||+++.++.++++|||+++........
T Consensus 126 ~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~---------------------------------- 171 (311)
T cd07866 126 EGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPN---------------------------------- 171 (311)
T ss_pred HHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcc----------------------------------
Confidence 9999999999999999999999999999999999998743310000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
... .........+...|++.|+
T Consensus 172 -------------------~~~---------------------------------------~~~~~~~~~~~~~~~~~y~ 193 (311)
T cd07866 172 -------------------PKG---------------------------------------GGGGGTRKYTNLVVTRWYR 193 (311)
T ss_pred -------------------ccc---------------------------------------CCcccccccccceeccCcC
Confidence 000 0000001114567889999
Q ss_pred CcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH-----HHHHhhcCC----------------------CC---
Q 002843 500 SPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA-----AMSDLRDRI----------------------LP--- 548 (874)
Q Consensus 500 APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~-----~~~~l~~~~----------------------lp--- 548 (874)
|||.+.+. .++.++|||||||++|||++|++||..... .+....... .+
T Consensus 194 aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (311)
T cd07866 194 PPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTL 273 (311)
T ss_pred ChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccH
Confidence 99988764 489999999999999999999988742111 011110000 00
Q ss_pred -CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 549 -PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 549 -p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
..+....+.+.+|+.+||..+|.+|||+.|+|.||||
T Consensus 274 ~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 274 EERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 0112233567899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.5e-27 Score=248.03 Aligned_cols=205 Identities=15% Similarity=0.096 Sum_probs=156.5
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFR 336 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~ 336 (874)
....+..+++...|++++.+..... +. ..+++|||+.|++|.+++... +..+++.+++.++.
T Consensus 47 ~~~~E~~~l~~l~h~~i~~~~~~~~-~~----------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ 109 (260)
T cd05067 47 AFLAEANLMKQLQHPRLVRLYAVVT-QE----------------PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAA 109 (260)
T ss_pred HHHHHHHHHHhcCCcCeeeEEEEEc-cC----------------CcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHH
Confidence 3444556777888998887765421 11 136799999999999999653 34789999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||+.||+||||||+||+++.++.++++|||+++.......
T Consensus 110 ~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-------------------------------- 157 (260)
T cd05067 110 QIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY-------------------------------- 157 (260)
T ss_pred HHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc--------------------------------
Confidence 999999999999999999999999999999999999998763220000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......++.
T Consensus 158 ----------------------------------------------------------------------~~~~~~~~~~ 167 (260)
T cd05067 158 ----------------------------------------------------------------------TAREGAKFPI 167 (260)
T ss_pred ----------------------------------------------------------------------ccccCCcccc
Confidence 0001223456
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||++|||++ |..||... ......+.....++........+.+|+.+||..+|++|
T Consensus 168 ~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 247 (260)
T cd05067 168 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEER 247 (260)
T ss_pred cccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 8999999998889999999999999999998 88887432 22333344433333334445679999999999999999
Q ss_pred CChhHHhh
Q 002843 574 PTTREILQ 581 (874)
Q Consensus 574 PTa~EiL~ 581 (874)
|++.+++.
T Consensus 248 p~~~~l~~ 255 (260)
T cd05067 248 PTFEYLRS 255 (260)
T ss_pred CCHHHHHH
Confidence 99999865
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=269.17 Aligned_cols=233 Identities=16% Similarity=0.130 Sum_probs=173.0
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHH--HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCcccc
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAA--LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (874)
.|.||||.+ --+.+++...-+.+.+.. .+-.+++.++...|.|++-+......++.
T Consensus 405 FGtV~Rg~w--------hGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-------------- 462 (678)
T KOG0193|consen 405 FGTVYRGRW--------HGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-------------- 462 (678)
T ss_pred ccceeeccc--------ccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce--------------
Confidence 488999974 112233344444444443 24556678888889888877766443322
Q ss_pred CCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 301 ~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
.++..+|+|-+|..+|.-...+|.....+.|++||+.|+.|||.++|||||||..||+|.+++.|||.||||+..-.
T Consensus 463 ---AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 463 ---AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT 539 (678)
T ss_pred ---eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeee
Confidence 45889999999999997665689999999999999999999999999999999999999999999999999975211
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
+ | .++
T Consensus 540 -----------------~----------------------------w-----~g~------------------------- 544 (678)
T KOG0193|consen 540 -----------------R----------------------------W-----SGE------------------------- 544 (678)
T ss_pred -----------------e----------------------------e-----ccc-------------------------
Confidence 0 0 000
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC---CCCCCccchhHHHHHHHHhcCCCCchHH--H
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLFFELFGRFDSERA--L 535 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g---~~ys~kSDIwSLGVIL~ELltG~~p~~~--~ 535 (874)
..+...-|...|||||++.- .+|++.||||||||++|||+||.-|+.. .
T Consensus 545 --------------------------~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~ 598 (678)
T KOG0193|consen 545 --------------------------QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR 598 (678)
T ss_pred --------------------------cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh
Confidence 00122356678999999874 4799999999999999999999988862 1
Q ss_pred HHHHHHhhcCCCCCCCC---CCCH-HHHHHHHHccccCCCCCCChhHHhh
Q 002843 536 AAAMSDLRDRILPPSFL---SENP-KEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 536 ~~~~~~l~~~~lpp~~~---~~~p-~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
...+-.+-++++.++.. ...+ .+.+|+..||.++|++||.+.+||.
T Consensus 599 dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 599 DQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred hheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 12222233455555443 3335 6889999999999999999999986
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-27 Score=260.58 Aligned_cols=222 Identities=14% Similarity=0.128 Sum_probs=160.1
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+...+....|++++.+.+....... .+++|||+. ++|.+++.... .+++..+..++.||+
T Consensus 68 ~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~ 129 (335)
T PTZ00024 68 LRELKIMNEIKHENIMGLVDVYVEGDF----------------INLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQIL 129 (335)
T ss_pred HHHHHHHHhCCCcceeeeeEEEecCCc----------------EEEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHH
Confidence 345567778889998888776543322 257999998 59999998765 699999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||+.||+|+||||+||+++.++.++++|||+++....+......
T Consensus 130 ~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~------------------------------- 178 (335)
T PTZ00024 130 NGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTL------------------------------- 178 (335)
T ss_pred HHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeecccccccccc-------------------------------
Confidence 9999999999999999999999999999999999998744311100000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
. +.. ............+++.|+
T Consensus 179 ---------------------~-------------~~~------------------------~~~~~~~~~~~~~~~~y~ 200 (335)
T PTZ00024 179 ---------------------S-------------KDE------------------------TMQRREEMTSKVVTLWYR 200 (335)
T ss_pred ---------------------c-------------ccc------------------------cccccccccccccccCCC
Confidence 0 000 000000112345688999
Q ss_pred CcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHh---hcCCCC--------------------C----
Q 002843 500 SPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDL---RDRILP--------------------P---- 549 (874)
Q Consensus 500 APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l---~~~~lp--------------------p---- 549 (874)
|||.+.+. .++.++|||||||++|||++|.+||.... ..+..+ .....+ +
T Consensus 201 aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (335)
T PTZ00024 201 APELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKT 280 (335)
T ss_pred CChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHH
Confidence 99999864 47899999999999999999998873211 111111 111100 0
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 550 ~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
.+......+.+|+.+||.++|++||++.|+|.||||+..
T Consensus 281 ~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~ 319 (335)
T PTZ00024 281 IFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD 319 (335)
T ss_pred hCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence 011234567899999999999999999999999999854
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=256.60 Aligned_cols=246 Identities=14% Similarity=0.079 Sum_probs=186.5
Q ss_pred EecCCCCccccc-ccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCce
Q 002843 227 CRGPPLNAFKER-RGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLR 305 (874)
Q Consensus 227 ~kg~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (874)
+-|.||-+++.+ |+.-+..+..+.-...|-..-+.+-..+....++..|..+..-. -+.+ .++
T Consensus 42 GEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYF--K~sD--------------LWI 105 (502)
T KOG0574|consen 42 GEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYF--KHSD--------------LWI 105 (502)
T ss_pred cCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhc--cCCc--------------eEe
Confidence 344555555522 33333323322233345555666667788888887777666532 2222 367
Q ss_pred EeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccC
Q 002843 306 QGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASL 385 (874)
Q Consensus 306 vMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~ 385 (874)
|||||..|+..+.++.++.+|++.++..+++..+.||+|||...-||||||..||||+.+|..||+|||.+..+.+.
T Consensus 106 VMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT--- 182 (502)
T KOG0574|consen 106 VMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT--- 182 (502)
T ss_pred ehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhh---
Confidence 99999999999999988889999999999999999999999999999999999999999999999999998654411
Q ss_pred CCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccccccc
Q 002843 386 DIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNA 465 (874)
Q Consensus 386 ~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~ 465 (874)
+
T Consensus 183 -------------------------------------------------------M------------------------ 183 (502)
T KOG0574|consen 183 -------------------------------------------------------M------------------------ 183 (502)
T ss_pred -------------------------------------------------------H------------------------
Confidence 0
Q ss_pred CcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhh-c
Q 002843 466 GFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLR-D 544 (874)
Q Consensus 466 ~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~-~ 544 (874)
....+.+|||.|||||++..-.|++++||||||++..||..|++|+.+......... .
T Consensus 184 ---------------------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP 242 (502)
T KOG0574|consen 184 ---------------------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP 242 (502)
T ss_pred ---------------------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc
Confidence 001477999999999999988899999999999999999999999976543222221 1
Q ss_pred CCCCCCCCCCC---HHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 545 RILPPSFLSEN---PKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 545 ~~lpp~~~~~~---p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
...||.|.... ..+-+|++.||...|++|.||.++++|||++.....
T Consensus 243 T~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~ 292 (502)
T KOG0574|consen 243 TKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGC 292 (502)
T ss_pred CCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcc
Confidence 33455554322 457899999999999999999999999999865433
|
|
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-27 Score=251.12 Aligned_cols=210 Identities=17% Similarity=0.187 Sum_probs=156.2
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....|++.+.+......+.. ...+++|||+++ +|.+++......+++.+++.++.||
T Consensus 45 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~--------------~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i 109 (287)
T cd07840 45 AIREIKLLQKLRHPNIVRLKEIVTSKGK--------------GSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQL 109 (287)
T ss_pred HHHHHHHHHhccCCCeeeheeeEecCCC--------------CcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHH
Confidence 3445556666778988887776554310 113679999985 9999998764579999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++|++|+||||+||+++.++.+|++|||++........
T Consensus 110 ~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~---------------------------------- 155 (287)
T cd07840 110 LEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS---------------------------------- 155 (287)
T ss_pred HHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc----------------------------------
Confidence 9999999999999999999999999999999999998764320000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
...+...++..|
T Consensus 156 --------------------------------------------------------------------~~~~~~~~~~~y 167 (287)
T cd07840 156 --------------------------------------------------------------------ADYTNRVITLWY 167 (287)
T ss_pred --------------------------------------------------------------------cccccccccccc
Confidence 000233567799
Q ss_pred cCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhc---CCC-------------------------
Q 002843 499 ASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRD---RIL------------------------- 547 (874)
Q Consensus 499 ~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~---~~l------------------------- 547 (874)
+|||.+.+. .++.++|||||||++|||++|..|+..... .+..+.. ...
T Consensus 168 ~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (287)
T cd07840 168 RPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRR 247 (287)
T ss_pred CCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhH
Confidence 999987753 578999999999999999999988742111 1111111 000
Q ss_pred -CCCCCC-CCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 548 -PPSFLS-ENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 548 -pp~~~~-~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
...+.. ..+.+.+++.+||..+|.+||++.+++.||||
T Consensus 248 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 248 LREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred HHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 001112 15678899999999999999999999999996
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-27 Score=253.91 Aligned_cols=206 Identities=19% Similarity=0.189 Sum_probs=155.5
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
.+.....|++++...+....+... +++|||+. ++|..++......+++..+..++.||+.||+
T Consensus 66 ~~~~~~~~~~i~~~~~~~~~~~~~----------------~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~ 128 (296)
T cd06618 66 VVLKSHDCPYIVKCYGYFITDSDV----------------FICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALH 128 (296)
T ss_pred HHHhccCCCchHhhheeeecCCeE----------------EEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 344555588888877765543332 56999986 5888888775447999999999999999999
Q ss_pred HHHH-CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 344 YHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 344 yLHs-~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
|||+ .||+||||+|+||+++.++.+||+|||++..+....
T Consensus 129 ~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~--------------------------------------- 169 (296)
T cd06618 129 YLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK--------------------------------------- 169 (296)
T ss_pred HHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC---------------------------------------
Confidence 9997 599999999999999999999999999876332000
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
......++..|+|||
T Consensus 170 -----------------------------------------------------------------~~~~~~~~~~y~aPE 184 (296)
T cd06618 170 -----------------------------------------------------------------AKTRSAGCAAYMAPE 184 (296)
T ss_pred -----------------------------------------------------------------cccCCCCCccccCHh
Confidence 001224567899999
Q ss_pred cccCCC----CCCccchhHHHHHHHHhcCCCCchHHHHH---HHHHhhcCCCC--CCCCCCCHHHHHHHHHccccCCCCC
Q 002843 503 ELSGGV----CTTSSNIYSLGVLFFELFGRFDSERALAA---AMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 503 vl~g~~----ys~kSDIwSLGVIL~ELltG~~p~~~~~~---~~~~l~~~~lp--p~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.+.+.. ++.++|||||||++|||++|..||..... .+..+.....+ +........+.+|+.+||+.||.+|
T Consensus 185 ~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 264 (296)
T cd06618 185 RIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKR 264 (296)
T ss_pred hcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 997653 78999999999999999999999854221 22222222111 1112245678999999999999999
Q ss_pred CChhHHhhhHHHHhhHh
Q 002843 574 PTTREILQSEVTNEFQE 590 (874)
Q Consensus 574 PTa~EiL~hp~~~~~~~ 590 (874)
|++.++++||||.....
T Consensus 265 p~~~~il~~~~~~~~~~ 281 (296)
T cd06618 265 PKYRELLQHPFIRRYET 281 (296)
T ss_pred CCHHHHhcChhhhccch
Confidence 99999999999986543
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=246.67 Aligned_cols=204 Identities=15% Similarity=0.048 Sum_probs=154.4
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~Q 337 (874)
...+...+....|++++.+..... .. ..+++|||+.+++|.+++... ...+++..+..++.|
T Consensus 48 ~~~E~~~l~~l~h~~i~~~~~~~~-~~----------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 110 (260)
T cd05069 48 FLQEAQIMKKLRHDKLVPLYAVVS-EE----------------PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQ 110 (260)
T ss_pred HHHHHHHHHhCCCCCeeeEEEEEc-CC----------------CcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHH
Confidence 344555677778988877654321 11 125799999999999999764 335899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||+.||+|+||||+||+++.++.++|+|||+++.......
T Consensus 111 l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~--------------------------------- 157 (260)
T cd05069 111 IADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY--------------------------------- 157 (260)
T ss_pred HHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc---------------------------------
Confidence 99999999999999999999999999999999999998863320000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......++..
T Consensus 158 ---------------------------------------------------------------------~~~~~~~~~~~ 168 (260)
T cd05069 158 ---------------------------------------------------------------------TARQGAKFPIK 168 (260)
T ss_pred ---------------------------------------------------------------------cccCCCccchh
Confidence 00011234567
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||.+.+..++.++|||||||++|||++ |..|+.. .......+.....++........+.+|+.+||+++|.+||
T Consensus 169 y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 248 (260)
T cd05069 169 WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERP 248 (260)
T ss_pred hCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCc
Confidence 999999988889999999999999999999 8888743 2223334444433333334456789999999999999999
Q ss_pred ChhHHhh
Q 002843 575 TTREILQ 581 (874)
Q Consensus 575 Ta~EiL~ 581 (874)
++.++++
T Consensus 249 ~~~~i~~ 255 (260)
T cd05069 249 TFEYIQS 255 (260)
T ss_pred CHHHHHH
Confidence 9998864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=246.68 Aligned_cols=204 Identities=16% Similarity=0.089 Sum_probs=156.0
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~Q 337 (874)
...+..+++...|++++.+...... . ..+++|||+++++|.+++.+. +..+++..++.++.|
T Consensus 48 ~~~e~~~l~~l~~~~i~~~~~~~~~-~----------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 110 (260)
T cd05073 48 FLAEANVMKTLQHDKLVKLHAVVTK-E----------------PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 110 (260)
T ss_pred HHHHHHHHHhcCCCCcceEEEEEcC-C----------------CeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHH
Confidence 3445557777889988888655432 1 125799999999999999763 346889999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||+.|++||||||+||+++..+.+|++|||++........
T Consensus 111 l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--------------------------------- 157 (260)
T cd05073 111 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY--------------------------------- 157 (260)
T ss_pred HHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc---------------------------------
Confidence 99999999999999999999999999999999999998763220000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......++..
T Consensus 158 ---------------------------------------------------------------------~~~~~~~~~~~ 168 (260)
T cd05073 158 ---------------------------------------------------------------------TAREGAKFPIK 168 (260)
T ss_pred ---------------------------------------------------------------------ccccCCccccc
Confidence 00011234467
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||++.+..++.++|||||||++|+|++ |..||.. .......+......+........+.+++.+||+++|++||
T Consensus 169 y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 248 (260)
T cd05073 169 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERP 248 (260)
T ss_pred ccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCc
Confidence 999999998889999999999999999998 8888743 2223334444433344445557799999999999999999
Q ss_pred ChhHHhh
Q 002843 575 TTREILQ 581 (874)
Q Consensus 575 Ta~EiL~ 581 (874)
++.+++.
T Consensus 249 ~~~~l~~ 255 (260)
T cd05073 249 TFEYIQS 255 (260)
T ss_pred CHHHHHH
Confidence 9988754
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-27 Score=277.55 Aligned_cols=187 Identities=16% Similarity=0.113 Sum_probs=132.9
Q ss_pred CceEeeccCCCCHHHHHHhCCCC-------------------CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEe
Q 002843 303 GLRQGSSDHGVNLREWLNARGHK-------------------GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~-------------------lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~ 363 (874)
.+++|||+.+++|.+++...... .....+..|+.||+.||+|||++|||||||||+|||++
T Consensus 210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~ 289 (566)
T PLN03225 210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFS 289 (566)
T ss_pred eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEe
Confidence 57899999999999999764311 12344678999999999999999999999999999998
Q ss_pred c-CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCcccccc
Q 002843 364 Q-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETAN 442 (874)
Q Consensus 364 ~-~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~ 442 (874)
. ++.+||+|||+++.+....
T Consensus 290 ~~~~~~KL~DFGlA~~l~~~~----------------------------------------------------------- 310 (566)
T PLN03225 290 EGSGSFKIIDLGAAADLRVGI----------------------------------------------------------- 310 (566)
T ss_pred CCCCcEEEEeCCCcccccccc-----------------------------------------------------------
Confidence 6 5789999999987433000
Q ss_pred ccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC---------------
Q 002843 443 ESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG--------------- 507 (874)
Q Consensus 443 ~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~--------------- 507 (874)
... ....++|+.|+|||.+...
T Consensus 311 ------------------------------~~~-------------~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~ 347 (566)
T PLN03225 311 ------------------------------NYI-------------PKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATAL 347 (566)
T ss_pred ------------------------------ccC-------------CcccccCCCccChHHhhccCCCCCCccccccccc
Confidence 000 0245678889999966432
Q ss_pred -------CCCCccchhHHHHHHHHhcCCCCchHHHHH-HHHHhhcC---------CCCCCC-----------CCCCHHHH
Q 002843 508 -------VCTTSSNIYSLGVLFFELFGRFDSERALAA-AMSDLRDR---------ILPPSF-----------LSENPKEA 559 (874)
Q Consensus 508 -------~ys~kSDIwSLGVIL~ELltG~~p~~~~~~-~~~~l~~~---------~lpp~~-----------~~~~p~l~ 559 (874)
.++.++|||||||+||||+++..++..... ....+... ..++.. .......+
T Consensus 348 sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 427 (566)
T PLN03225 348 SPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGW 427 (566)
T ss_pred cchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHH
Confidence 234567999999999999997655433211 11111110 011111 01122356
Q ss_pred HHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 560 GFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 560 dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
+||.+||.+||++|||+.|+|+||||+.....
T Consensus 428 dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 428 ELLKSMMRFKGRQRISAKAALAHPYFDREGLL 459 (566)
T ss_pred HHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence 89999999999999999999999999875544
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=254.09 Aligned_cols=206 Identities=17% Similarity=0.211 Sum_probs=154.7
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+...++...|++++.+......... .+++|||+++ +|.+++......+++.+++.++.||+
T Consensus 46 ~~e~~~l~~l~~~~i~~~~~~~~~~~~----------------~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~ 108 (283)
T cd05118 46 LREIKLLKELNHPNIIKLLDVFRHKGD----------------LYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLL 108 (283)
T ss_pred HHHHHHHHHhcCCCcchHHHhhccCCC----------------EEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHH
Confidence 334455666668888887776543322 3579999985 99999977555799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||++||+|+||||+||+++.++.++|+|||.+.......
T Consensus 109 ~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~------------------------------------ 152 (283)
T cd05118 109 QGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV------------------------------------ 152 (283)
T ss_pred HHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc------------------------------------
Confidence 99999999999999999999999999999999999876332000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.......++.+|+
T Consensus 153 -------------------------------------------------------------------~~~~~~~~~~~~~ 165 (283)
T cd05118 153 -------------------------------------------------------------------RPYTHYVVTRWYR 165 (283)
T ss_pred -------------------------------------------------------------------ccccCccCccccc
Confidence 0002335678999
Q ss_pred CcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhc---CC------------------C--------
Q 002843 500 SPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRD---RI------------------L-------- 547 (874)
Q Consensus 500 APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~---~~------------------l-------- 547 (874)
|||.+.+. .++.++|||||||++|+|++|..||..... .+..+.. .. .
T Consensus 166 ~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (283)
T cd05118 166 APELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPL 245 (283)
T ss_pred CcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCH
Confidence 99999876 689999999999999999999887732111 0111100 00 0
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 548 PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 548 pp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
.......+..+.+||.+||.+||.+||++.+++.||||
T Consensus 246 ~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 246 PKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred HHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 00111234678899999999999999999999999996
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-27 Score=253.12 Aligned_cols=205 Identities=19% Similarity=0.172 Sum_probs=151.8
Q ss_pred HHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHH
Q 002843 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~aL~ 343 (874)
.+....|++++.+........... ....+++|||+.+ +|.+++.... ..+++..++.++.||+.||.
T Consensus 54 ~l~~~~h~~i~~~~~~~~~~~~~~-----------~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~ 121 (287)
T cd07838 54 QLESFEHPNIVRLLDVCHGPRTDR-----------ELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVD 121 (287)
T ss_pred HhhccCCCCcceEEEEEeeccCCC-----------CceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHH
Confidence 344556898888877655332200 0013679999985 8999997643 26999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
|||+.||+|+||+|+||+++.++.+||+|||++......
T Consensus 122 ~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~----------------------------------------- 160 (287)
T cd07838 122 FLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE----------------------------------------- 160 (287)
T ss_pred HHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC-----------------------------------------
Confidence 999999999999999999999999999999987632200
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
.......++..|+|||+
T Consensus 161 ---------------------------------------------------------------~~~~~~~~~~~~~~PE~ 177 (287)
T cd07838 161 ---------------------------------------------------------------MALTSVVVTLWYRAPEV 177 (287)
T ss_pred ---------------------------------------------------------------cccccccccccccChHH
Confidence 00012346789999999
Q ss_pred ccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcC------------------CCCCC--------CCCCC
Q 002843 504 LSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDR------------------ILPPS--------FLSEN 555 (874)
Q Consensus 504 l~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~------------------~lpp~--------~~~~~ 555 (874)
+.+..++.++|||||||++|||++|.+||..... ....+... ..+.. .....
T Consensus 178 ~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (287)
T cd07838 178 LLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEIC 257 (287)
T ss_pred hccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhh
Confidence 9988899999999999999999999888743211 11111100 00000 01123
Q ss_pred HHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 556 PKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 556 p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
+.+.+||.+||.+||.+||++.++|+||||
T Consensus 258 ~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 258 EEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred HHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 556799999999999999999999999996
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-27 Score=252.23 Aligned_cols=205 Identities=17% Similarity=0.193 Sum_probs=153.4
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+...+....|++++.+........ ..+++|||++ ++|.+++.+....+++..++.++.||+.
T Consensus 47 ~e~~~l~~~~~~~i~~~~~~~~~~~----------------~~~~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~ 109 (282)
T cd07829 47 REISLLKELKHPNIVKLLDVIHTER----------------KLYLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLR 109 (282)
T ss_pred HHHHHHHhcCCCCHHHHHhhhhcCC----------------ceEEEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHH
Confidence 3444555566888777666544222 1357999998 5999999886447999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||+|||++||+||||+|+||+++.++.++|+|||+++......
T Consensus 110 ~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~------------------------------------- 152 (282)
T cd07829 110 GLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL------------------------------------- 152 (282)
T ss_pred HHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc-------------------------------------
Confidence 9999999999999999999999999999999999876322000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
.......++..|+|
T Consensus 153 ------------------------------------------------------------------~~~~~~~~~~~~~a 166 (282)
T cd07829 153 ------------------------------------------------------------------RTYTHEVVTLWYRA 166 (282)
T ss_pred ------------------------------------------------------------------cccCccccCcCcCC
Confidence 00012345678999
Q ss_pred cccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH------HHHHhh----------------cCCCC--------C
Q 002843 501 PEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA------AMSDLR----------------DRILP--------P 549 (874)
Q Consensus 501 PEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~------~~~~l~----------------~~~lp--------p 549 (874)
||.+.+. .++.++|||||||++|||++|.+|+..... ....+. ....+ .
T Consensus 167 PE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (282)
T cd07829 167 PEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEK 246 (282)
T ss_pred hHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHH
Confidence 9999876 789999999999999999999888733211 010000 00000 1
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 550 ~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
.+......+.+|+.+||..+|++||++.+++.||||
T Consensus 247 ~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 247 VLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred hcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 112234678999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=253.59 Aligned_cols=206 Identities=14% Similarity=0.115 Sum_probs=158.7
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..+++...|++++.+......... .+++|||+. ++|.+++......+++.++..++.||+
T Consensus 63 ~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~ 125 (308)
T cd06634 63 IKEVRFLQKLRHPNTIQYRGCYLREHT----------------AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGAL 125 (308)
T ss_pred HHHHHHHHhCCCCCcccEEEEEEcCCe----------------eEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 345556777788888887766553322 257999997 588888876555799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||+++|+||||||+||+++.++.++++|||++.....
T Consensus 126 ~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-------------------------------------- 167 (308)
T cd06634 126 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------------------------------------- 167 (308)
T ss_pred HHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC--------------------------------------
Confidence 999999999999999999999999999999999998752110
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.....|++.|+
T Consensus 168 ---------------------------------------------------------------------~~~~~~~~~y~ 178 (308)
T cd06634 168 ---------------------------------------------------------------------ANXFVGTPYWM 178 (308)
T ss_pred ---------------------------------------------------------------------cccccCCcccc
Confidence 01234677899
Q ss_pred CcccccC---CCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCC-CCCCCHHHHHHHHHccccCCCCC
Q 002843 500 SPEELSG---GVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPS-FLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 500 APEvl~g---~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~-~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
|||.+.+ ..++.++|||||||++|+|++|..|+..... ....+.....+.. .......+.+||.+||.++|.+|
T Consensus 179 aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~R 258 (308)
T cd06634 179 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 258 (308)
T ss_pred CHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccC
Confidence 9999853 4578999999999999999999988743221 1222332222221 22344668899999999999999
Q ss_pred CChhHHhhhHHHHhhH
Q 002843 574 PTTREILQSEVTNEFQ 589 (874)
Q Consensus 574 PTa~EiL~hp~~~~~~ 589 (874)
|++.+++.|||+....
T Consensus 259 p~~~~ll~~~~~~~~~ 274 (308)
T cd06634 259 PTSEVLLKHRFVLRER 274 (308)
T ss_pred CCHHHHhhCccccccC
Confidence 9999999999998743
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.3e-27 Score=259.51 Aligned_cols=214 Identities=16% Similarity=0.226 Sum_probs=158.2
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...+....|++++.+........... .....+++|+++ |++|.+++... .+++..++.++.||
T Consensus 63 ~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~----------~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi 129 (345)
T cd07877 63 TYRELRLLKHMKHENVIGLLDVFTPARSLE----------EFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQI 129 (345)
T ss_pred HHHHHHHHHHcCCCcccceeeeeeeccccc----------ccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHH
Confidence 444556778888999988876543211110 001135688887 78999988764 59999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 130 ~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~------------------------------------- 172 (345)
T cd07877 130 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------------------------------- 172 (345)
T ss_pred HHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc-------------------------------------
Confidence 9999999999999999999999999999999999998763210
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......++++|
T Consensus 173 ---------------------------------------------------------------------~~~~~~~~~~y 183 (345)
T cd07877 173 ---------------------------------------------------------------------EMTGYVATRWY 183 (345)
T ss_pred ---------------------------------------------------------------------cccccccCCCc
Confidence 00123567899
Q ss_pred cCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc-------------------------CCCCC-
Q 002843 499 ASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD-------------------------RILPP- 549 (874)
Q Consensus 499 ~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~-------------------------~~lpp- 549 (874)
+|||.+.+ ..++.++|||||||++|||++|..||.... .....+.. ...+.
T Consensus 184 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (345)
T cd07877 184 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM 263 (345)
T ss_pred cCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCc
Confidence 99999876 468899999999999999999988873211 00010000 00010
Q ss_pred ----CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 550 ----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 550 ----~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
.+....+.+.+||.+||++||.+||++.++|.||||......
T Consensus 264 ~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~ 309 (345)
T cd07877 264 NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 309 (345)
T ss_pred chhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCC
Confidence 112345678899999999999999999999999999975543
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=246.20 Aligned_cols=206 Identities=16% Similarity=0.111 Sum_probs=155.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--------CCCCHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--------HKGKRIE 330 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~--------~~lse~e 330 (874)
...+..++....|++++.+......... .+++|||+++++|.+++.... ..+++..
T Consensus 55 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~ 118 (275)
T cd05046 55 FRRELDMFRKLSHKNVVRLLGLCREAEP----------------HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQ 118 (275)
T ss_pred HHHHHHHHHhcCCcceeeeEEEECCCCc----------------ceEEEEecCCCcHHHHHHhcccccccccccCCCHHH
Confidence 4445567777789988887765432111 367999999999999997643 1589999
Q ss_pred HHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccch
Q 002843 331 CLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIA 410 (874)
Q Consensus 331 ~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~ 410 (874)
++.++.||+.||+|||++||+||||||+|||++.++.++++|||+++.......
T Consensus 119 ~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~-------------------------- 172 (275)
T cd05046 119 KVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEY-------------------------- 172 (275)
T ss_pred HHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcccc--------------------------
Confidence 999999999999999999999999999999999999999999998753220000
Q ss_pred hhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccc
Q 002843 411 SAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVS 490 (874)
Q Consensus 411 ~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t 490 (874)
....
T Consensus 173 ----------------------------------------------------------------------------~~~~ 176 (275)
T cd05046 173 ----------------------------------------------------------------------------YKLR 176 (275)
T ss_pred ----------------------------------------------------------------------------cccC
Confidence 0001
Q ss_pred cccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCC-CCCCCCCHHHHHHHHHcc
Q 002843 491 EQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILP-PSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 491 ~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lp-p~~~~~~p~l~dLi~~cL 566 (874)
...++..|+|||.+.+..++.++|||||||++|+|++ |..||... ......+....++ +........+.+++.+||
T Consensus 177 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l 256 (275)
T cd05046 177 NALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCW 256 (275)
T ss_pred CceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHc
Confidence 2345668999999988888999999999999999998 77777432 2223333333322 222334467899999999
Q ss_pred ccCCCCCCChhHHhhh
Q 002843 567 HPEPLSRPTTREILQS 582 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~h 582 (874)
..+|++||++.|++..
T Consensus 257 ~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 257 AVNPKDRPSFSELVSA 272 (275)
T ss_pred CCCcccCCCHHHHHHH
Confidence 9999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-27 Score=283.75 Aligned_cols=229 Identities=21% Similarity=0.210 Sum_probs=161.3
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC----------CCCC
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR----------GHKG 326 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~----------~~~l 326 (874)
.+...+...+....||+++.+......++.. +++||||+|++|.++|... ...+
T Consensus 47 ~rflrEi~ILs~L~HPNIVkl~~v~~d~~~l----------------yLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~l 110 (932)
T PRK13184 47 KRFLREAKIAADLIHPGIVPVYSICSDGDPV----------------YYTMPYIEGYTLKSLLKSVWQKESLSKELAEKT 110 (932)
T ss_pred HHHHHHHHHHHhCCCcCcCeEEEEEeeCCEE----------------EEEEEcCCCCCHHHHHHHhhhccccchhhhccc
Confidence 3455667788888999999887765433322 4699999999999999642 1145
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhcc
Q 002843 327 KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFT 406 (874)
Q Consensus 327 se~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg 406 (874)
+...++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........ ..+.
T Consensus 111 sv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~----------------~~~l- 173 (932)
T PRK13184 111 SVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEED----------------LLDI- 173 (932)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceeccccccc----------------cccc-
Confidence 66788999999999999999999999999999999999999999999998754200000 0000
Q ss_pred ccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccc
Q 002843 407 TGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQS 486 (874)
Q Consensus 407 ~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~ 486 (874)
. .... + .+ ....
T Consensus 174 --~----------------------------~~~~--------~---------------------------s~---~s~~ 185 (932)
T PRK13184 174 --D----------------------------VDER--------N---------------------------IC---YSSM 185 (932)
T ss_pred --c----------------------------cccc--------c---------------------------cc---cccc
Confidence 0 0000 0 00 0000
Q ss_pred cccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCC-C---CCCCCCCHHHHHHH
Q 002843 487 TSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRIL-P---PSFLSENPKEAGFC 562 (874)
Q Consensus 487 ~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~l-p---p~~~~~~p~l~dLi 562 (874)
......+||+.|+|||++.+..++.++|||||||++|||++|..||............... | ..+....+.+.+++
T Consensus 186 t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI 265 (932)
T PRK13184 186 TIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIA 265 (932)
T ss_pred ccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHH
Confidence 1113467999999999999989999999999999999999999998542211111111111 1 11234456789999
Q ss_pred HHccccCCCCCCChhHHhhhHHHH
Q 002843 563 LWQLHPEPLSRPTTREILQSEVTN 586 (874)
Q Consensus 563 ~~cL~~dP~~RPTa~EiL~hp~~~ 586 (874)
.+||..||++||+..+.|...+..
T Consensus 266 ~rcL~~DP~kR~ss~eeLl~~Le~ 289 (932)
T PRK13184 266 MKALAVDPAERYSSVQELKQDLEP 289 (932)
T ss_pred HHHccCChhhCcCHHHHHHHHHHH
Confidence 999999999999887777665433
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.4e-28 Score=249.23 Aligned_cols=251 Identities=16% Similarity=0.138 Sum_probs=186.2
Q ss_pred hhcCCceEEEecCCCCccc-cccc--ccccccccccCCChhHHH--HHHHHhHHhhcCCCCCceeccceeecCcccCCcC
Q 002843 218 TTLKGKGIVCRGPPLNAFK-ERRG--MIDTKAFVTTTMPSDAAL--KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGAR 292 (874)
Q Consensus 218 ~~~kgkGvv~kg~~~~~~~-~~~~--~~~~~~~~~~~~~~d~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (874)
+.|+--|-++.|.-|.+.+ -+|. .+.+++..++.+-...+. .......+.+...|.||.-+.-.+.|....+
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~I--- 168 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFI--- 168 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHH---
Confidence 4444445555555555555 2344 344444444554443333 3444456667778888888888776665543
Q ss_pred CCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCceEEecCCcEEEe
Q 002843 293 TGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYI 371 (874)
Q Consensus 293 ~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~-gIIHRDLKPsNILL~~~~~vKLi 371 (874)
-||.|. ..+..+|++-.++++|..+=++..-++.||.||-.+ ||||||+||+||||+..|++|+|
T Consensus 169 -------------cMelMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlC 234 (391)
T KOG0983|consen 169 -------------CMELMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLC 234 (391)
T ss_pred -------------HHHHHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEee
Confidence 489885 788888887666899999999999999999999865 89999999999999999999999
Q ss_pred ccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccC
Q 002843 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (874)
Q Consensus 372 DFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 451 (874)
|||++-.+.++-.
T Consensus 235 DFGIsGrlvdSkA------------------------------------------------------------------- 247 (391)
T KOG0983|consen 235 DFGISGRLVDSKA------------------------------------------------------------------- 247 (391)
T ss_pred cccccceeecccc-------------------------------------------------------------------
Confidence 9999876552211
Q ss_pred CCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC---CCCCccchhHHHHHHHHhcCC
Q 002843 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG---VCTTSSNIYSLGVLFFELFGR 528 (874)
Q Consensus 452 ~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~---~ys~kSDIwSLGVIL~ELltG 528 (874)
.+...|.+.|||||.+.-. .|+..+||||||+.|+||.||
T Consensus 248 -------------------------------------htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg 290 (391)
T KOG0983|consen 248 -------------------------------------HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATG 290 (391)
T ss_pred -------------------------------------cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcc
Confidence 1455678899999998753 589999999999999999999
Q ss_pred CCchHHH---HHHHHHhhcCCCCCCCC---CCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 529 FDSERAL---AAAMSDLRDRILPPSFL---SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 529 ~~p~~~~---~~~~~~l~~~~lpp~~~---~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
..|+... -..+..+.+ ..||.+. ..++.+.+|+..||..|+.+||...++|+|||+.....
T Consensus 291 ~yPy~~c~tdFe~ltkvln-~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~ 357 (391)
T KOG0983|consen 291 QYPYKGCKTDFEVLTKVLN-EEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYET 357 (391)
T ss_pred cCCCCCCCccHHHHHHHHh-cCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecch
Confidence 9998542 223333333 2333332 35689999999999999999999999999999886543
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=269.82 Aligned_cols=255 Identities=17% Similarity=0.196 Sum_probs=184.9
Q ss_pred ccccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCccccc-cccccccccccc--CC-ChhHHHHHHHHhHHhh
Q 002843 194 NMLSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKER-RGMIDTKAFVTT--TM-PSDAALKAAGAMMVAS 268 (874)
Q Consensus 194 ~~~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~-~~~~~~~~~~~~--~~-~~d~~~~~~~~~l~~~ 268 (874)
-.|.|+.|.. |.|..+.|+| ||+|.+- .... .....+++..+- .. .......+.++.+++.
T Consensus 152 Wel~H~~v~l~kkLGeGaFGe------------V~~G~l~--~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~ 217 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGE------------VFKGKLK--LKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQ 217 (474)
T ss_pred cEEeccCccccceeecccccE------------EEEEEEE--ecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHh
Confidence 3456666655 7888887766 6666520 0000 001012222221 11 2233447888899999
Q ss_pred cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002843 269 NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ 348 (874)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~ 348 (874)
..|||+|.++..+.....+. ++||+|.||+|.+||++.+..++..+.+.++.+.+.||+|||++
T Consensus 218 l~H~NVVr~yGVa~~~~Pl~----------------ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k 281 (474)
T KOG0194|consen 218 LNHPNVVRFYGVAVLEEPLM----------------LVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK 281 (474)
T ss_pred CCCCCEEEEEEEEcCCCccE----------------EEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC
Confidence 99999999999877555544 59999999999999998875799999999999999999999999
Q ss_pred CCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccc
Q 002843 349 GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWS 428 (874)
Q Consensus 349 gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~ 428 (874)
++|||||-..|+|+..++.+||+|||+++....-
T Consensus 282 ~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~---------------------------------------------- 315 (474)
T KOG0194|consen 282 NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQY---------------------------------------------- 315 (474)
T ss_pred CCcchhHhHHHheecCCCeEEeCccccccCCcce----------------------------------------------
Confidence 9999999999999999999999999998632100
Q ss_pred cCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCC
Q 002843 429 LFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV 508 (874)
Q Consensus 429 ~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ 508 (874)
. +. .. .-+.| ..|+|||.+..+.
T Consensus 316 ----------~-~~--------------------------~~-~~klP-------------------irWLAPEtl~~~~ 338 (474)
T KOG0194|consen 316 ----------V-MK--------------------------KF-LKKLP-------------------IRWLAPETLNTGI 338 (474)
T ss_pred ----------e-ec--------------------------cc-cccCc-------------------ceecChhhhccCc
Confidence 0 00 00 00111 4789999999999
Q ss_pred CCCccchhHHHHHHHHhcC-CCCchHHHH--HHHHHh-hcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 509 CTTSSNIYSLGVLFFELFG-RFDSERALA--AAMSDL-RDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 509 ys~kSDIwSLGVIL~ELlt-G~~p~~~~~--~~~~~l-~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
|++++|||||||++||+++ |..|+.+.. .....+ ......+........+..++..|+..+|++||+|.++.+
T Consensus 339 ~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 339 FSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred cccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 9999999999999999998 777774432 334444 444433333344456788999999999999999998843
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-27 Score=276.19 Aligned_cols=240 Identities=18% Similarity=0.150 Sum_probs=184.1
Q ss_pred ceEEEecCCCCcccccccccccccccccCCCh-hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
+|.||+|..-...+.--++-.+++..+..... .+..+-.+..|++...||++|.++....-+..+
T Consensus 499 FGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~-------------- 564 (774)
T KOG1026|consen 499 FGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL-------------- 564 (774)
T ss_pred hhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee--------------
Confidence 35677776433333222333333333322222 223356677899999999999999885544443
Q ss_pred CCceEeeccCCCCHHHHHHhCC---------CC----CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcE
Q 002843 302 GGLRQGSSDHGVNLREWLNARG---------HK----GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~---------~~----lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~v 368 (874)
|++.|||..|||.+||..+. .. |+..+.++|+.||+.|++||-++.+|||||-..|+|+.++-.|
T Consensus 565 --~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 565 --CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred --EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEE
Confidence 45999999999999997532 13 8899999999999999999999999999999999999999999
Q ss_pred EEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCcccccccccccc
Q 002843 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (874)
Q Consensus 369 KLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~ 448 (874)
||+|||++|++-.+.. -++.
T Consensus 643 KIsDfGLsRdiYssDY------------------------------Yk~~------------------------------ 662 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDY------------------------------YKVR------------------------------ 662 (774)
T ss_pred Eecccccchhhhhhhh------------------------------hccc------------------------------
Confidence 9999999996551110 0000
Q ss_pred ccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-
Q 002843 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG- 527 (874)
Q Consensus 449 ~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt- 527 (874)
+.+ +=...|||||.+..++||++||||||||+|||+++
T Consensus 663 ----------------------~~t-------------------~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsy 701 (774)
T KOG1026|consen 663 ----------------------GNT-------------------LLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSY 701 (774)
T ss_pred ----------------------CCc-------------------eeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhcc
Confidence 001 11258999999999999999999999999999998
Q ss_pred CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHH
Q 002843 528 RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (874)
Q Consensus 528 G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~Ei 579 (874)
|..|+.. ..+.+..++.+.+-+......+++.+||..||+.+|++||++.||
T Consensus 702 G~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 702 GKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred ccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 7888743 456788899988877777788899999999999999999999998
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-27 Score=261.07 Aligned_cols=214 Identities=15% Similarity=0.215 Sum_probs=158.9
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..+++...|++++.+........... .....+++|||+. .+|..++. ..+++.++..++.||
T Consensus 61 ~~~e~~~l~~l~h~niv~~~~~~~~~~~~~----------~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~qi 126 (342)
T cd07879 61 AYRELTLLKHMQHENVIGLLDVFTSAVSGD----------EFQDFYLVMPYMQ-TDLQKIMG---HPLSEDKVQYLVYQM 126 (342)
T ss_pred HHHHHHHHHhcCCCCccchhheecccccCC----------CCceEEEEecccc-cCHHHHHc---CCCCHHHHHHHHHHH
Confidence 344556777788999888776644322211 0112368999997 48887763 258999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 127 ~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~------------------------------------- 169 (342)
T cd07879 127 LCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA------------------------------------- 169 (342)
T ss_pred HHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC-------------------------------------
Confidence 9999999999999999999999999999999999998763210
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......++++|
T Consensus 170 ---------------------------------------------------------------------~~~~~~~~~~y 180 (342)
T cd07879 170 ---------------------------------------------------------------------EMTGYVVTRWY 180 (342)
T ss_pred ---------------------------------------------------------------------CCCCceeeecc
Confidence 00123567899
Q ss_pred cCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhc-------------------------CCCCC-
Q 002843 499 ASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRD-------------------------RILPP- 549 (874)
Q Consensus 499 ~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~-------------------------~~lpp- 549 (874)
+|||.+.+ ..++.++|||||||++|||++|..||..... .+..+.. ...+.
T Consensus 181 ~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (342)
T cd07879 181 RAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRK 260 (342)
T ss_pred cChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccc
Confidence 99999876 4589999999999999999999988743211 0111000 00010
Q ss_pred ----CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 550 ----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 550 ----~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
.+....+.+.+|+.+||+.||.+||++.++|.||||...+...
T Consensus 261 ~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~ 307 (342)
T cd07879 261 DFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDAD 307 (342)
T ss_pred hHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccccc
Confidence 1223456788999999999999999999999999999887644
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.5e-28 Score=278.63 Aligned_cols=242 Identities=16% Similarity=0.173 Sum_probs=177.4
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (874)
-++||+|.|.++.-+. |-.+.. .-....-....|..+..|||+|..+-.-..+..+++
T Consensus 523 Gt~Vf~G~ye~R~VAV------Krll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YI------------- 580 (903)
T KOG1027|consen 523 GTVVFRGVYEGREVAV------KRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYI------------- 580 (903)
T ss_pred CcEEEEEeeCCceehH------HHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEE-------------
Confidence 3589999975543321 111111 111222234567888999999999887666666554
Q ss_pred CceEeeccCCCCHHHHHHhCCC--C-CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC-----CcEEEeccc
Q 002843 303 GLRQGSSDHGVNLREWLNARGH--K-GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-----NQVKYIGPI 374 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~--~-lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~-----~~vKLiDFG 374 (874)
..|.|. -+|.++++..+. . ......+.++.|+++||++||+.+||||||||.||||+.. .+++|+|||
T Consensus 581 ---alELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfg 656 (903)
T KOG1027|consen 581 ---ALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFG 656 (903)
T ss_pred ---EehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccc
Confidence 799998 799999987421 1 1225678899999999999999999999999999999862 468999999
Q ss_pred cchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCC
Q 002843 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (874)
Q Consensus 375 lar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 454 (874)
+++++...
T Consensus 657 lsKkl~~~------------------------------------------------------------------------ 664 (903)
T KOG1027|consen 657 LSKKLAGG------------------------------------------------------------------------ 664 (903)
T ss_pred cccccCCC------------------------------------------------------------------------
Confidence 99976510
Q ss_pred CCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCC-CCchH
Q 002843 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR-FDSER 533 (874)
Q Consensus 455 d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG-~~p~~ 533 (874)
. +........-||.+|+|||++....-+.++||||||||+|+.++| ..||.
T Consensus 665 -----------------~-----------sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFG 716 (903)
T KOG1027|consen 665 -----------------K-----------SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFG 716 (903)
T ss_pred -----------------c-----------chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCC
Confidence 0 000112456789999999999998888899999999999999996 89997
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCH--HHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 534 ALAAAMSDLRDRILPPSFLSENP--KEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 534 ~~~~~~~~l~~~~lpp~~~~~~p--~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
....--.+|..+...-..+...+ ...+||.+||+++|..||+|.++|.||+|=....
T Consensus 717 d~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ek 775 (903)
T KOG1027|consen 717 DSLERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDSEK 775 (903)
T ss_pred chHHhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCChHH
Confidence 66554445544433222233333 7789999999999999999999999999865443
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-27 Score=261.03 Aligned_cols=213 Identities=17% Similarity=0.239 Sum_probs=158.0
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+...++...|++++.+......+.... .....+++|||+ |++|.+++... .+++.+++.++.||+
T Consensus 62 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----------~~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~ 128 (343)
T cd07851 62 YRELRLLKHMDHENVIGLLDVFTPASSLE----------DFQDVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQIL 128 (343)
T ss_pred HHHHHHHHhccCCCHHHHHHHhhcccccc----------ccccEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHH
Confidence 34556677778998887765433222100 001136899999 57999999864 699999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 129 ~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------------------------------------- 171 (343)
T cd07851 129 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE------------------------------------- 171 (343)
T ss_pred HHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc-------------------------------------
Confidence 9999999999999999999999999999999999987632200
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.....++..|+
T Consensus 172 ---------------------------------------------------------------------~~~~~~~~~y~ 182 (343)
T cd07851 172 ---------------------------------------------------------------------MTGYVATRWYR 182 (343)
T ss_pred ---------------------------------------------------------------------ccCCccccccc
Confidence 01235677899
Q ss_pred CcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhc--CC----------------------------
Q 002843 500 SPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRD--RI---------------------------- 546 (874)
Q Consensus 500 APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~--~~---------------------------- 546 (874)
|||.+.+. .++.++|||||||++|||++|..||..... ....+.. +.
T Consensus 183 aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (343)
T cd07851 183 APEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKD 262 (343)
T ss_pred CHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCC
Confidence 99998763 578999999999999999999988732111 1111100 00
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 547 LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 547 lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
+...+...++.+.+|+.+||.++|++|||+.+||+||||......
T Consensus 263 ~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 263 FKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred HHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence 001122346778999999999999999999999999999965443
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=245.53 Aligned_cols=207 Identities=16% Similarity=0.089 Sum_probs=149.5
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---CCCCHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---HKGKRIECLY 333 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---~~lse~e~~~ 333 (874)
.....+...++...||+++.+......... .+++||||+||+|.+++.+.. ..+++..++.
T Consensus 40 ~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 103 (268)
T cd05086 40 NEFLQQGDPYRILQHPNILQCLGQCVEAIP----------------YLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQR 103 (268)
T ss_pred HHHHHHHHHHhccCCcchhheEEEecCCCc----------------cEEEEecCCCCcHHHHHHhhhcccccccHHHHHH
Confidence 345555566777889999988876542221 267999999999999997632 2467778899
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
++.||+.||+|||+++|+||||||+|||++.++.+|++|||++.......
T Consensus 104 ~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~------------------------------ 153 (268)
T cd05086 104 MACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED------------------------------ 153 (268)
T ss_pred HHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcch------------------------------
Confidence 99999999999999999999999999999999999999999875211000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
.+ .......
T Consensus 154 -------------------------------~~----------------------------------------~~~~~~~ 162 (268)
T cd05086 154 -------------------------------YI----------------------------------------ETEDDKC 162 (268)
T ss_pred -------------------------------hh----------------------------------------hcccCCc
Confidence 00 0002345
Q ss_pred ccccccCcccccC-------CCCCCccchhHHHHHHHHhcC-CCCchHH---HHHHHHHhhc---CCCCCCCC-CCCHHH
Q 002843 494 EEKWYASPEELSG-------GVCTTSSNIYSLGVLFFELFG-RFDSERA---LAAAMSDLRD---RILPPSFL-SENPKE 558 (874)
Q Consensus 494 GT~~Y~APEvl~g-------~~ys~kSDIwSLGVIL~ELlt-G~~p~~~---~~~~~~~l~~---~~lpp~~~-~~~p~l 558 (874)
++..|+|||++.. ..++.++|||||||++|||++ +..|+.. .......+.. ....+.+. ...+.+
T Consensus 163 ~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (268)
T cd05086 163 VPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERW 242 (268)
T ss_pred CcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHH
Confidence 6789999999753 235789999999999999996 4666632 1111112222 11223332 345678
Q ss_pred HHHHHHccccCCCCCCChhHHhh
Q 002843 559 AGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 559 ~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
.+++..|| .+|.+||++.+|++
T Consensus 243 ~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 243 YEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred HHHHHHHh-hCcccCCCHHHHHH
Confidence 89999999 67999999999864
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=251.07 Aligned_cols=207 Identities=19% Similarity=0.145 Sum_probs=156.1
Q ss_pred HHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 265 MVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 265 l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
++... .|++++.+......+.. .+++|||++|++|.++|.... .+++..+..++.||+.||.
T Consensus 57 ~l~~l~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~ 119 (290)
T cd05613 57 VLEHIRQSPFLVTLHYAFQTDTK----------------LHLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALE 119 (290)
T ss_pred HHHhcccCCChhceeeEeecCCe----------------EEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHH
Confidence 34333 56777766555442222 257999999999999998765 6999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 120 ~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--------------------------------------- 160 (290)
T cd05613 120 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV--------------------------------------- 160 (290)
T ss_pred HHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc---------------------------------------
Confidence 99999999999999999999999999999998763220000
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
.......|+..|+|||.
T Consensus 161 ---------------------------------------------------------------~~~~~~~~~~~y~aPE~ 177 (290)
T cd05613 161 ---------------------------------------------------------------ERAYSFCGTIEYMAPDI 177 (290)
T ss_pred ---------------------------------------------------------------cccccccCCcccCChhh
Confidence 00013457789999999
Q ss_pred ccCC--CCCCccchhHHHHHHHHhcCCCCchHH------HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC-
Q 002843 504 LSGG--VCTTSSNIYSLGVLFFELFGRFDSERA------LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP- 574 (874)
Q Consensus 504 l~g~--~ys~kSDIwSLGVIL~ELltG~~p~~~------~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP- 574 (874)
+.+. .++.++|||||||++|+|++|..|+.. .......+.. ..++......+.+.+|+.+||..+|++||
T Consensus 178 ~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~ 256 (290)
T cd05613 178 VRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK-SEPPYPQEMSALAKDIIQRLLMKDPKKRLG 256 (290)
T ss_pred ccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc-cCCCCCccCCHHHHHHHHHHhcCCHHHhcC
Confidence 8763 478899999999999999999988742 1111112211 11222233457789999999999999997
Q ss_pred ----ChhHHhhhHHHHhhHhh
Q 002843 575 ----TTREILQSEVTNEFQEV 591 (874)
Q Consensus 575 ----Ta~EiL~hp~~~~~~~~ 591 (874)
++.+++.||||+...+.
T Consensus 257 ~~~~~~~~l~~~~~~~~~~~~ 277 (290)
T cd05613 257 CGPSDADEIKKHPFFQKINWD 277 (290)
T ss_pred CCCCCHHHHHcCcccccCCHH
Confidence 88999999999987643
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=244.61 Aligned_cols=206 Identities=13% Similarity=0.053 Sum_probs=156.1
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFR 336 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~ 336 (874)
....+...+....|++++.+......+.. .+++|||++|++|.+++.... ..+++.+++.++.
T Consensus 47 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 110 (261)
T cd05034 47 AFLQEAQIMKKLRHDKLVQLYAVCSEEEP----------------IYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAA 110 (261)
T ss_pred HHHHHHHHHhhCCCCCEeeeeeeeecCCc----------------eEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHH
Confidence 34445567777789988887665432221 257999999999999997643 4799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+|+||||+||+++.++.+|++|||+++.+..... .
T Consensus 111 ~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~------------------------------~- 159 (261)
T cd05034 111 QIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY------------------------------T- 159 (261)
T ss_pred HHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhh------------------------------h-
Confidence 999999999999999999999999999999999999998764320000 0
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
......++.
T Consensus 160 -----------------------------------------------------------------------~~~~~~~~~ 168 (261)
T cd05034 160 -----------------------------------------------------------------------AREGAKFPI 168 (261)
T ss_pred -----------------------------------------------------------------------hhhccCCCc
Confidence 000112245
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||.+.+..++.++|||||||++|||++ |..||.. ....+..+......+........+.+++.+||..+|++|
T Consensus 169 ~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 248 (261)
T cd05034 169 KWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEER 248 (261)
T ss_pred cccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccC
Confidence 7999999998889999999999999999998 8888743 222333443333333333345678999999999999999
Q ss_pred CChhHHhh
Q 002843 574 PTTREILQ 581 (874)
Q Consensus 574 PTa~EiL~ 581 (874)
|++.++++
T Consensus 249 p~~~~l~~ 256 (261)
T cd05034 249 PTFEYLQS 256 (261)
T ss_pred CCHHHHHH
Confidence 99998863
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=258.09 Aligned_cols=222 Identities=18% Similarity=0.117 Sum_probs=155.8
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCcccc--CCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW--IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
..+...+....||+++.+......++.... . ....+. ...+++|||++ ++|.+++... .+++..++.++.|
T Consensus 50 ~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~q 122 (342)
T cd07854 50 LREIKIIRRLDHDNIVKVYEVLGPSGSDLT-E---DVGSLTELNSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQ 122 (342)
T ss_pred HHHHHHHHhcCCCcchhhHhhhcccccccc-c---ccccccccceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHH
Confidence 344556677789998887766543332211 0 000011 11468999998 5999998754 5999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEec-CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~-~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
|+.||.|||+.||+||||||+||+++. ++.+|++|||+++.+.....
T Consensus 123 i~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~-------------------------------- 170 (342)
T cd07854 123 LLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYS-------------------------------- 170 (342)
T ss_pred HHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccc--------------------------------
Confidence 999999999999999999999999975 45789999998763220000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.........++.
T Consensus 171 --------------------------------------------------------------------~~~~~~~~~~~~ 182 (342)
T cd07854 171 --------------------------------------------------------------------HKGYLSEGLVTK 182 (342)
T ss_pred --------------------------------------------------------------------cccccccccccc
Confidence 000001235688
Q ss_pred cccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhc----------------------CCCCC-
Q 002843 497 WYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRD----------------------RILPP- 549 (874)
Q Consensus 497 ~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~----------------------~~lpp- 549 (874)
.|+|||.+.+ ..++.++|||||||++|||++|..||.... .....+.. ...++
T Consensus 183 ~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (342)
T cd07854 183 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPR 262 (342)
T ss_pred cccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccC
Confidence 9999998765 458899999999999999999998873211 11110000 00000
Q ss_pred -----CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 550 -----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 550 -----~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
........+.+|+.+||.+||.+|||+.|+|.||||+..
T Consensus 263 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 263 RPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred CCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence 112344668899999999999999999999999999854
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-27 Score=250.99 Aligned_cols=223 Identities=13% Similarity=0.128 Sum_probs=159.7
Q ss_pred HHhHHhhcC-CCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 262 GAMMVASNA-SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 262 ~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
+..++.... |++++.+......+.. .+++|||++|++|.+++.+.+ .+++.+++.|+.||+.
T Consensus 51 e~~~~~~l~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~ 113 (280)
T cd05581 51 EKEVLTRLNGHPGIIKLYYTFQDEEN----------------LYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILL 113 (280)
T ss_pred HHHHHHhcccCCCchhHHHHhcCCce----------------EEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHH
Confidence 334454555 8888777665443222 357999999999999998876 7999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||.|||+.|++|+||+|+||+++.++.++++|||++.............
T Consensus 114 ~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~------------------------------- 162 (280)
T cd05581 114 ALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNK------------------------------- 162 (280)
T ss_pred HHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCC-------------------------------
Confidence 9999999999999999999999999999999999987443110000000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
..... +.. . ............|+..|+|
T Consensus 163 ---------------~~~~~--------------~~~--------------~---------~~~~~~~~~~~~~~~~~~~ 190 (280)
T cd05581 163 ---------------GDATN--------------IDS--------------Q---------IEKNRRRFASFVGTAEYVS 190 (280)
T ss_pred ---------------CCCcc--------------ccc--------------c---------ccccccccccccCCccccC
Confidence 00000 000 0 0000001134567889999
Q ss_pred cccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh--
Q 002843 501 PEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-- 576 (874)
Q Consensus 501 PEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa-- 576 (874)
||.+.+..++.++|||||||++|+|++|..|+..... ....+..... .......+.+.+|+.+||+.+|.+||++
T Consensus 191 Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 269 (280)
T cd05581 191 PELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEY-SFPPNFPPDAKDLIEKLLVLDPQDRLGVNE 269 (280)
T ss_pred HHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCC-CCCCccCHHHHHHHHHHhcCCHhhCCCccc
Confidence 9999888899999999999999999999999854322 1222221111 1112235678999999999999999999
Q ss_pred --hHHhhhHHH
Q 002843 577 --REILQSEVT 585 (874)
Q Consensus 577 --~EiL~hp~~ 585 (874)
.++|+||||
T Consensus 270 ~~~~ll~~~~~ 280 (280)
T cd05581 270 GYDELKAHPFF 280 (280)
T ss_pred CHHHHhcCCCC
Confidence 999999997
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=279.30 Aligned_cols=104 Identities=19% Similarity=0.164 Sum_probs=89.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....|++++.++........ .+++||||.|++|.++|...+ .+++..++.|+.||
T Consensus 51 ~~~E~~~l~~l~hp~Iv~~~~~~~~~~~----------------~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qi 113 (669)
T cd05610 51 VQAERDALALSKSPFIVHLYYSLQSANN----------------VYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEV 113 (669)
T ss_pred HHHHHHHHHhcCCCCcCeEEEEEEECCE----------------EEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 4445566777889999988765443322 257999999999999998765 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~ 379 (874)
+.||+|||.+|||||||||+||||+.++.+||+|||+++..
T Consensus 114 l~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~ 154 (669)
T cd05610 114 ALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVT 154 (669)
T ss_pred HHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccc
Confidence 99999999999999999999999999999999999999854
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=249.43 Aligned_cols=217 Identities=17% Similarity=0.097 Sum_probs=156.0
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..+++...||+++.+............ ... -....+++|||++| +|..++......+++.+++.|+.||+
T Consensus 54 ~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~-----~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~ 126 (302)
T cd07864 54 IREIKILRQLNHRNIVNLKEIVTDKQDALD-----FKK-DKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLL 126 (302)
T ss_pred HHHHHHHHhCCCCCeeeeeheecCcchhhh-----ccc-cCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence 345566777789998887665432220000 000 00124689999986 78888876544799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||+.||+|+||||+||+++.++.+||+|||+++.......
T Consensus 127 ~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~----------------------------------- 171 (302)
T cd07864 127 EGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES----------------------------------- 171 (302)
T ss_pred HHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcc-----------------------------------
Confidence 999999999999999999999999999999999998864330000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.......++..|+
T Consensus 172 -------------------------------------------------------------------~~~~~~~~~~~y~ 184 (302)
T cd07864 172 -------------------------------------------------------------------RPYTNKVITLWYR 184 (302)
T ss_pred -------------------------------------------------------------------cccccceeccCcc
Confidence 0001224567899
Q ss_pred CcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH-----HHHHhhcCCCC-------------------------
Q 002843 500 SPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA-----AMSDLRDRILP------------------------- 548 (874)
Q Consensus 500 APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~-----~~~~l~~~~lp------------------------- 548 (874)
|||.+.+. .++.++|||||||++|||++|++|+..... .+........+
T Consensus 185 ~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (302)
T cd07864 185 PPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRL 264 (302)
T ss_pred ChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccch
Confidence 99988754 478999999999999999999988843211 11111111111
Q ss_pred -CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHH
Q 002843 549 -PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 549 -p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~ 585 (874)
..+....+.+.+|+.+||+.+|.+||++.++|.||||
T Consensus 265 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 265 REEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 0112335678999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=250.10 Aligned_cols=209 Identities=20% Similarity=0.158 Sum_probs=156.3
Q ss_pred HHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 262 GAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 262 ~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
+..++... .||+++.+......+.. .+++|||+.|++|.+++.... .+++.++..++.|++.
T Consensus 54 E~~~l~~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~ 116 (288)
T cd05583 54 ERQVLEAVRRCPFLVTLHYAFQTDTK----------------LHLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVL 116 (288)
T ss_pred HHHHHHhccCCcchhhhheeeecCCE----------------EEEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHH
Confidence 34444444 57777777655432222 357999999999999998765 6999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||.|||+.|++||||||+||+++.++.++++|||+++.......
T Consensus 117 ~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------ 160 (288)
T cd05583 117 ALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE------------------------------------ 160 (288)
T ss_pred HHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc------------------------------------
Confidence 99999999999999999999999999999999998763220000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
.......|+..|+|
T Consensus 161 ------------------------------------------------------------------~~~~~~~~~~~y~a 174 (288)
T cd05583 161 ------------------------------------------------------------------ERAYSFCGTIEYMA 174 (288)
T ss_pred ------------------------------------------------------------------cccccccCCccccC
Confidence 00012356789999
Q ss_pred cccccCCC--CCCccchhHHHHHHHHhcCCCCchHHH------HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 501 PEELSGGV--CTTSSNIYSLGVLFFELFGRFDSERAL------AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 501 PEvl~g~~--ys~kSDIwSLGVIL~ELltG~~p~~~~------~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
||.+.+.. ++.++||||||+++|||++|..|+... ......+... .++......+.+.+|+.+||..+|++
T Consensus 175 PE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~ 253 (288)
T cd05583 175 PEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS-KPPFPKTMSAEARDFIQKLLEKDPKK 253 (288)
T ss_pred HHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc-CCCCCcccCHHHHHHHHHHhcCCHhh
Confidence 99987755 788999999999999999999887321 1111112111 22222334577899999999999999
Q ss_pred CCCh---hHHhhhHHHHhhHh
Q 002843 573 RPTT---REILQSEVTNEFQE 590 (874)
Q Consensus 573 RPTa---~EiL~hp~~~~~~~ 590 (874)
|||+ .++|+||||+.+.+
T Consensus 254 R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 254 RLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred ccCcchHHHHhcCcccccCCH
Confidence 9984 67799999988654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=242.06 Aligned_cols=205 Identities=19% Similarity=0.176 Sum_probs=159.6
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+..+++...|++++.+......+.. .+++|||+++++|.+++.... .+++.++..++.||+
T Consensus 41 ~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~ 103 (250)
T cd05123 41 LTERNILSRINHPFIVKLHYAFQTEEK----------------LYLVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIV 103 (250)
T ss_pred HHHHHHHHHcCCCcHHHHHHHeecCCe----------------eEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHH
Confidence 334456677778888877766443222 257999999999999998775 699999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||+.+++|+||+|+||+++.++.++++|||++.......
T Consensus 104 ~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~------------------------------------ 147 (250)
T cd05123 104 LALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG------------------------------------ 147 (250)
T ss_pred HHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC------------------------------------
Confidence 99999999999999999999999999999999999876332000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.......++..|+
T Consensus 148 -------------------------------------------------------------------~~~~~~~~~~~~~ 160 (250)
T cd05123 148 -------------------------------------------------------------------SRTNTFCGTPEYL 160 (250)
T ss_pred -------------------------------------------------------------------CcccCCcCCcccc
Confidence 0002345677899
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh-
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT- 576 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa- 576 (874)
|||.+.+..++.++|+|||||++|+|++|..|+.... .....+....+ +........+.+|+.+||..||++||++
T Consensus 161 ~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~i~~~l~~~p~~R~~~~ 239 (250)
T cd05123 161 APEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPL-RFPEFLSPEARDLISGLLQKDPTKRLGSG 239 (250)
T ss_pred ChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHhcCCHhhCCCcc
Confidence 9999988888999999999999999999998884322 22223322111 1112225678999999999999999999
Q ss_pred --hHHhhhHHH
Q 002843 577 --REILQSEVT 585 (874)
Q Consensus 577 --~EiL~hp~~ 585 (874)
.++++||||
T Consensus 240 ~~~~l~~~~~f 250 (250)
T cd05123 240 GAEEIKAHPFF 250 (250)
T ss_pred cHHHHHhCCCC
Confidence 899999997
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-27 Score=248.24 Aligned_cols=185 Identities=15% Similarity=0.145 Sum_probs=152.0
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcccc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLES 382 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~ 382 (874)
.|.||||..||.|.-.|.+.. .+++..++.+-..|+.||.|||+++||.||||.+|.||+.+|++||+|||++++--..
T Consensus 243 lCFVMeyanGGeLf~HLsrer-~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~ 321 (516)
T KOG0690|consen 243 LCFVMEYANGGELFFHLSRER-VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY 321 (516)
T ss_pred EEEEEEEccCceEeeehhhhh-cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccc
Confidence 477999999999999997754 7999999999999999999999999999999999999999999999999999842200
Q ss_pred ccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccc
Q 002843 383 ASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHH 462 (874)
Q Consensus 383 ~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~ 462 (874)
T Consensus 322 -------------------------------------------------------------------------------- 321 (516)
T KOG0690|consen 322 -------------------------------------------------------------------------------- 321 (516)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHH
Q 002843 463 TNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMS 540 (874)
Q Consensus 463 ~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~ 540 (874)
| ....+.+|||.|.|||++....|+.++|.|.+||++|||+||+.||... ...+.
T Consensus 322 --------g---------------~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFe 378 (516)
T KOG0690|consen 322 --------G---------------DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFE 378 (516)
T ss_pred --------c---------------ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHH
Confidence 0 0014679999999999999999999999999999999999999998543 22222
Q ss_pred Hh-hcCCCCCCCCCCCHHHHHHHHHccccCCCCCC-----ChhHHhhhHHHHhhHhhhh
Q 002843 541 DL-RDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEFQEVCA 593 (874)
Q Consensus 541 ~l-~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP-----Ta~EiL~hp~~~~~~~~~~ 593 (874)
-+ ...+..|. ..+++...|+..+|..||.+|. .+.||.+|+||..+.+...
T Consensus 379 LIl~ed~kFPr--~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~ 435 (516)
T KOG0690|consen 379 LILMEDLKFPR--TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEAT 435 (516)
T ss_pred HHHhhhccCCc--cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHH
Confidence 22 12222222 2357788999999999999995 4789999999998877543
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=254.45 Aligned_cols=208 Identities=17% Similarity=0.209 Sum_probs=156.5
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+...+....||+++.+......++.. .+++|||+ +++|.++++.. .+++..+..++.||+
T Consensus 57 ~~E~~~l~~l~hpniv~~~~~~~~~~~~---------------~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~ 118 (328)
T cd07856 57 YRELKLLKHLRHENIISLSDIFISPLED---------------IYFVTELL-GTDLHRLLTSR--PLEKQFIQYFLYQIL 118 (328)
T ss_pred HHHHHHHHhcCCCCeeeEeeeEecCCCc---------------EEEEeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHH
Confidence 3455667777899988877665432221 25799999 56999998754 589999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||++||+||||||+|||++.++.++++|||+++....
T Consensus 119 ~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~-------------------------------------- 160 (328)
T cd07856 119 RGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP-------------------------------------- 160 (328)
T ss_pred HHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC--------------------------------------
Confidence 999999999999999999999999999999999998752210
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
......++..|+
T Consensus 161 --------------------------------------------------------------------~~~~~~~~~~y~ 172 (328)
T cd07856 161 --------------------------------------------------------------------QMTGYVSTRYYR 172 (328)
T ss_pred --------------------------------------------------------------------CcCCCccccccc
Confidence 001234577899
Q ss_pred CcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHHH-----HHHHh------------------------hc-CCCC
Q 002843 500 SPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALAA-----AMSDL------------------------RD-RILP 548 (874)
Q Consensus 500 APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~-----~~~~l------------------------~~-~~lp 548 (874)
|||.+.+ ..++.++|||||||++|+|++|.+||..... .+..+ .. ...+
T Consensus 173 aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (328)
T cd07856 173 APEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVP 252 (328)
T ss_pred CceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCc
Confidence 9999876 4689999999999999999999888732110 00000 00 0001
Q ss_pred --CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 549 --PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 549 --p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
.......+.+.++|.+||.++|++||++.++|.||||...+..
T Consensus 253 ~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~ 297 (328)
T cd07856 253 FSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP 297 (328)
T ss_pred HHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence 0112344678999999999999999999999999999765544
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-27 Score=230.48 Aligned_cols=210 Identities=16% Similarity=0.192 Sum_probs=164.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+-.+++...|.|+|.+.+..+++.... +|.|||. .+|..|...-+..++.+.++.++.|+
T Consensus 48 alreicllkelkhknivrl~dvlhsdkklt----------------lvfe~cd-qdlkkyfdslng~~d~~~~rsfmlql 110 (292)
T KOG0662|consen 48 ALREICLLKELKHKNIVRLHDVLHSDKKLT----------------LVFEFCD-QDLKKYFDSLNGDLDPEIVRSFMLQL 110 (292)
T ss_pred HHHHHHHHHHhhhcceeehhhhhccCceeE----------------EeHHHhh-HHHHHHHHhcCCcCCHHHHHHHHHHH
Confidence 445558999999999999999988666544 5999998 79999998866689999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|+|++++.||||||.|.||+.+|.+|++|||+++..+-+
T Consensus 111 lrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgip------------------------------------ 154 (292)
T KOG0662|consen 111 LRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP------------------------------------ 154 (292)
T ss_pred HhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc------------------------------------
Confidence 99999999999999999999999999999999999999854400
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.-| .+..+-|.||
T Consensus 155 ----------------------------------------------------------vrc---------ysaevvtlwy 167 (292)
T KOG0662|consen 155 ----------------------------------------------------------VRC---------YSAEVVTLWY 167 (292)
T ss_pred ----------------------------------------------------------eEe---------eeceeeeeec
Confidence 001 1345678999
Q ss_pred cCcccccCCC-CCCccchhHHHHHHHHhcC-CCCchH--HHHHHHHHhhc-------CCCC-----------CCCC----
Q 002843 499 ASPEELSGGV-CTTSSNIYSLGVLFFELFG-RFDSER--ALAAAMSDLRD-------RILP-----------PSFL---- 552 (874)
Q Consensus 499 ~APEvl~g~~-ys~kSDIwSLGVIL~ELlt-G~~p~~--~~~~~~~~l~~-------~~lp-----------p~~~---- 552 (874)
++|.++.|.+ |++..|+||.|||+.||.. |++-|. +....+..+.. ..+| |.+.
T Consensus 168 rppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypatts 247 (292)
T KOG0662|consen 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTS 247 (292)
T ss_pred cCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccch
Confidence 9999999976 8999999999999999986 554442 22211222111 1111 1111
Q ss_pred ------CCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 553 ------SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 553 ------~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
..+..-.+++.++|.-+|.+|++++++|+||||...
T Consensus 248 wsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 248 WSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred HHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 111234699999999999999999999999999864
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-26 Score=242.42 Aligned_cols=196 Identities=14% Similarity=0.185 Sum_probs=152.0
Q ss_pred hhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHH
Q 002843 267 ASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I~~QIl~aL~ 343 (874)
....|++++........++. .+++|||++|++|.+++.. ....+++..++.++.||+.||.
T Consensus 64 ~~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 127 (269)
T cd08528 64 EQLRHPNIVRYYKTFLENDR----------------LYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALR 127 (269)
T ss_pred hcCCCCCeeeEEeeEccCCe----------------EEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence 34678888887776553333 2569999999999999843 3347999999999999999999
Q ss_pred HHHH-CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 344 YHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 344 yLHs-~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
|||+ .||+|+||||+||+++.++.+||+|||++......
T Consensus 128 ~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~---------------------------------------- 167 (269)
T cd08528 128 YLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPE---------------------------------------- 167 (269)
T ss_pred HhccCCceeecCCCHHHEEECCCCcEEEecccceeecccc----------------------------------------
Confidence 9996 78999999999999999999999999987632200
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
.......|+..|+|||
T Consensus 168 ----------------------------------------------------------------~~~~~~~~~~~~~~Pe 183 (269)
T cd08528 168 ----------------------------------------------------------------SKLTSVVGTILYSCPE 183 (269)
T ss_pred ----------------------------------------------------------------cccccccCcccCcChh
Confidence 0002345678899999
Q ss_pred cccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCCC-CCCCHHHHHHHHHccccCCCCCCChhHH
Q 002843 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPLSRPTTREI 579 (874)
Q Consensus 503 vl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~~-~~~~p~l~dLi~~cL~~dP~~RPTa~Ei 579 (874)
.+.+..++.++|||||||++|||++|..|+..... ....+.....++.. ....+.+.+|+.+||..||++||++.|+
T Consensus 184 ~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~ 263 (269)
T cd08528 184 IVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQV 263 (269)
T ss_pred hhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHH
Confidence 99988899999999999999999999999743221 22233333333222 2345789999999999999999999998
Q ss_pred hhh
Q 002843 580 LQS 582 (874)
Q Consensus 580 L~h 582 (874)
..+
T Consensus 264 ~~~ 266 (269)
T cd08528 264 SAM 266 (269)
T ss_pred HHH
Confidence 654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-27 Score=252.59 Aligned_cols=201 Identities=17% Similarity=0.133 Sum_probs=142.4
Q ss_pred cCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccc-h
Q 002843 300 WIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ-K 377 (874)
Q Consensus 300 ~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGla-r 377 (874)
...-|++.|.+ |.|+.++|+++ ..+++...++.|.+||+.+++|||+.+++|-||||+|||+.++...+.-+-+.. .
T Consensus 163 rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccc
Confidence 33457899988 58999999874 448999999999999999999999999999999999999987766554333221 0
Q ss_pred hccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCC
Q 002843 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (874)
Q Consensus 378 ~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~ 457 (874)
.. ...+.-
T Consensus 242 ~~-------------r~~ks~----------------------------------------------------------- 249 (415)
T KOG0671|consen 242 FI-------------RPLKST----------------------------------------------------------- 249 (415)
T ss_pred ee-------------ccCCCc-----------------------------------------------------------
Confidence 00 000000
Q ss_pred CcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCch-----
Q 002843 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSE----- 532 (874)
Q Consensus 458 ~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~----- 532 (874)
.-++.|||.+.+- . ...+..+.|..|+|||++.+.+++.++||||+||||+||++|..-|
T Consensus 250 ------~I~vIDFGsAtf~-----~----e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 250 ------AIKVIDFGSATFD-----H----EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred ------ceEEEecCCccee-----c----cCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 1122333332211 0 0014678899999999999999999999999999999999996544
Q ss_pred HHHHHHHHHhhcCCCCCC-----------------------------------C-----CCCC---HHHHHHHHHccccC
Q 002843 533 RALAAAMSDLRDRILPPS-----------------------------------F-----LSEN---PKEAGFCLWQLHPE 569 (874)
Q Consensus 533 ~~~~~~~~~l~~~~lpp~-----------------------------------~-----~~~~---p~l~dLi~~cL~~d 569 (874)
.++.++|+.+.. ++|.. . .... ..+.||+.+||.+|
T Consensus 315 ~EHLaMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fD 393 (415)
T KOG0671|consen 315 LEHLAMMERILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFD 393 (415)
T ss_pred HHHHHHHHHhhC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccC
Confidence 233334444433 11110 0 0001 24679999999999
Q ss_pred CCCCCChhHHhhhHHHHhhH
Q 002843 570 PLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 570 P~~RPTa~EiL~hp~~~~~~ 589 (874)
|.+|+|+.|+|.||||+.+.
T Consensus 394 P~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 394 PARRITLREALSHPFFARLT 413 (415)
T ss_pred ccccccHHHHhcCHHhhcCC
Confidence 99999999999999998754
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=261.30 Aligned_cols=248 Identities=14% Similarity=0.084 Sum_probs=162.7
Q ss_pred HHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHH
Q 002843 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (874)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~y 344 (874)
+|+.-..+=+|.++-....+.+.+ .||+|++||++-.+|-+.+ .|+|..++.|+..+..|+++
T Consensus 682 ILAEADn~WVVrLyySFQDkdnLY----------------FVMdYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAies 744 (1034)
T KOG0608|consen 682 ILAEADNEWVVRLYYSFQDKDNLY----------------FVMDYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIES 744 (1034)
T ss_pred hHhhcCCcceEEEEEEeccCCceE----------------EEEeccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHH
Confidence 444444455666666666555555 4999999999999998887 79999999999999999999
Q ss_pred HHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccc
Q 002843 345 HHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (874)
Q Consensus 345 LHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~ 424 (874)
.|..|+|||||||+||||+.+|++||+|||||.-+.=. - .+|+- .++...
T Consensus 745 VHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT-H--------------------------dskYY---q~gdH~ 794 (1034)
T KOG0608|consen 745 VHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT-H--------------------------DSKYY---QEGDHH 794 (1034)
T ss_pred HHhccceecccCccceEEccCCceeeeeccccccceec-c--------------------------ccccc---cCCCcc
Confidence 99999999999999999999999999999998632200 0 00000 000000
Q ss_pred cccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccc-ccccccccccccccccccCccc
Q 002843 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNT-AQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 425 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~-~~~~~~~~t~~~GT~~Y~APEv 503 (874)
+ +|+ .+. ...+++.+...-++--.. .+.........+||+.|+|||+
T Consensus 795 R----------------------------qDS--mep--~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapev 842 (1034)
T KOG0608|consen 795 R----------------------------QDS--MEP--SPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEV 842 (1034)
T ss_pred c----------------------------ccc--CCC--chhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHH
Confidence 0 000 000 000111111000000000 0111122246799999999999
Q ss_pred ccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHH-----HHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC---C
Q 002843 504 LSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAA-----MSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP---T 575 (874)
Q Consensus 504 l~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~-----~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP---T 575 (874)
+....|+..+|.||.|||||||+.|.+||.+.... +..++...--+-....+++..++|.++. ..++.|. .
T Consensus 843 l~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng 921 (1034)
T KOG0608|consen 843 LARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNG 921 (1034)
T ss_pred hcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccc
Confidence 99989999999999999999999999999542211 1111111111222344566778887755 4677784 4
Q ss_pred hhHHhhhHHHHhhHhhh
Q 002843 576 TREILQSEVTNEFQEVC 592 (874)
Q Consensus 576 a~EiL~hp~~~~~~~~~ 592 (874)
++||..||||+++....
T Consensus 922 ~d~vKaHpfFkgIDfss 938 (1034)
T KOG0608|consen 922 ADQVKAHPFFKGIDFSS 938 (1034)
T ss_pred hhhhhcCccccccchHh
Confidence 67899999999988765
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=249.96 Aligned_cols=185 Identities=17% Similarity=0.181 Sum_probs=153.8
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcccc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLES 382 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~ 382 (874)
.+.|||||.||+|--.|++-+ ++.+..+..++..|+-||-|||++|||.||||.+||||+..|++||+|||++++-.
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~G-kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni-- 501 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVG-KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI-- 501 (683)
T ss_pred eeeEEEEecCchhhhHHHHhc-ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccc--
Confidence 356999999999999999988 79999999999999999999999999999999999999999999999999997311
Q ss_pred ccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccc
Q 002843 383 ASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHH 462 (874)
Q Consensus 383 ~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~ 462 (874)
++
T Consensus 502 ----------------------~~-------------------------------------------------------- 503 (683)
T KOG0696|consen 502 ----------------------FD-------------------------------------------------------- 503 (683)
T ss_pred ----------------------cC--------------------------------------------------------
Confidence 00
Q ss_pred cccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHH
Q 002843 463 TNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMS 540 (874)
Q Consensus 463 ~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~ 540 (874)
. ....+.+|||.|+|||++...+|+.++|.||+||+||||+.|.+||+. ....+.
T Consensus 504 ---------~--------------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~ 560 (683)
T KOG0696|consen 504 ---------G--------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ 560 (683)
T ss_pred ---------C--------------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 0 011467999999999999999999999999999999999999999953 333445
Q ss_pred HhhcC-CCCCCCCCCCHHHHHHHHHccccCCCCCCCh-----hHHhhhHHHHhhHhhhh
Q 002843 541 DLRDR-ILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNEFQEVCA 593 (874)
Q Consensus 541 ~l~~~-~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa-----~EiL~hp~~~~~~~~~~ 593 (874)
.+.+. ...|. +.+.+..++|..+|...|.+|... .+|-.||||+.+.+...
T Consensus 561 aI~ehnvsyPK--slSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~ 617 (683)
T KOG0696|consen 561 AIMEHNVSYPK--SLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKL 617 (683)
T ss_pred HHHHccCcCcc--cccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHH
Confidence 55442 22222 234567799999999999999654 67999999999888765
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=245.18 Aligned_cols=178 Identities=13% Similarity=0.133 Sum_probs=135.0
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccc
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESA 383 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~ 383 (874)
+++||++. .++.+++.... .+++..++.|+.||+.||+|||+++|+||||||+|||++.++.++|+|||+++......
T Consensus 103 ~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~ 180 (294)
T PHA02882 103 FILLEKLV-ENTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHG 180 (294)
T ss_pred EEEEehhc-cCHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCC
Confidence 46788875 57888776653 57899999999999999999999999999999999999999999999999987543100
Q ss_pred cCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccccc
Q 002843 384 SLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHT 463 (874)
Q Consensus 384 ~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~ 463 (874)
. ...
T Consensus 181 ~-------------------------------------------------------~~~--------------------- 184 (294)
T PHA02882 181 K-------------------------------------------------------HIE--------------------- 184 (294)
T ss_pred c-------------------------------------------------------ccc---------------------
Confidence 0 000
Q ss_pred ccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH---H---
Q 002843 464 NAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA---A--- 537 (874)
Q Consensus 464 ~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~--- 537 (874)
..........||+.|+|||++.+..++.++|||||||+||||++|..||.... .
T Consensus 185 --------------------~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 185 --------------------YSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred --------------------cccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 00000023468999999999999899999999999999999999999985331 1
Q ss_pred -----HHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 538 -----AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 538 -----~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
....+..... .+....+.+.+++..|+..+|++||++.++++
T Consensus 245 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 245 AAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 1122222211 12233466889999999999999999999875
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-25 Score=238.21 Aligned_cols=213 Identities=12% Similarity=0.034 Sum_probs=154.8
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-----CCCCCHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-----GHKGKRIECLY 333 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-----~~~lse~e~~~ 333 (874)
...+...++...||+++.+.+......... ...-..+++||+.+++|..++... ...+++..++.
T Consensus 48 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~ 117 (273)
T cd05074 48 FLREAACMKEFDHPNVIKLIGVSLRSRAKG----------RLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVR 117 (273)
T ss_pred HHHHHHHHhcCCCCCcceEEEEEccCCCCC----------cccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHH
Confidence 444556788888999998887644221110 000124689999999999988532 12578999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
++.||+.||+|||+.||+||||||+||+++.++.+|++|||+++.......
T Consensus 118 ~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~----------------------------- 168 (273)
T cd05074 118 FMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDY----------------------------- 168 (273)
T ss_pred HHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcc-----------------------------
Confidence 999999999999999999999999999999999999999998874320000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
. .......
T Consensus 169 ---------------------------~---------------------------------------------~~~~~~~ 176 (273)
T cd05074 169 ---------------------------Y---------------------------------------------RQGCASK 176 (273)
T ss_pred ---------------------------e---------------------------------------------ecCCCcc
Confidence 0 0001123
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCC
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP 570 (874)
+++.|++||.+.+..++.++|||||||++|||++ |.+|+... ......+...............+.+++.+||.++|
T Consensus 177 ~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p 256 (273)
T cd05074 177 LPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEP 256 (273)
T ss_pred CchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCh
Confidence 3457999999998889999999999999999999 78886322 11222222222222223345779999999999999
Q ss_pred CCCCChhHHhhh
Q 002843 571 LSRPTTREILQS 582 (874)
Q Consensus 571 ~~RPTa~EiL~h 582 (874)
++||++.++++.
T Consensus 257 ~~Rps~~~~~~~ 268 (273)
T cd05074 257 KCRPSFQHLRDQ 268 (273)
T ss_pred hhCcCHHHHHHH
Confidence 999999999765
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=232.31 Aligned_cols=207 Identities=20% Similarity=0.221 Sum_probs=161.1
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....|++++.+......+.. .+++|||+++++|.+++.... .+++..++.++.+
T Consensus 33 ~~~~e~~~~~~l~~~~i~~~~~~~~~~~~----------------~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~ 95 (244)
T smart00220 33 RILREISILKKLKHPNIVRLYDVFEDEDK----------------LYLVMEYCDGGDLFDLLKKRG-RLSEDEARFYARQ 95 (244)
T ss_pred HHHHHHHHHHhCCCCcHHHHHhheeeCCE----------------EEEEEeCCCCCCHHHHHHhcc-CCCHHHHHHHHHH
Confidence 34444456666678877766655443222 367999999999999998765 4899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.+|.|||+.+|+|+||+|+||+++.++.++++|||.+.......
T Consensus 96 l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---------------------------------- 141 (244)
T smart00220 96 ILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---------------------------------- 141 (244)
T ss_pred HHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc----------------------------------
Confidence 9999999999999999999999999999999999999876433000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
......++..
T Consensus 142 ----------------------------------------------------------------------~~~~~~~~~~ 151 (244)
T smart00220 142 ----------------------------------------------------------------------LLTTFVGTPE 151 (244)
T ss_pred ----------------------------------------------------------------------ccccccCCcC
Confidence 0023456778
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH---HHHHHHHhhcCCCCCCCCC--CCHHHHHHHHHccccCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA---LAAAMSDLRDRILPPSFLS--ENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~---~~~~~~~l~~~~lpp~~~~--~~p~l~dLi~~cL~~dP~~ 572 (874)
|+|||.+.+..++.++||||||+++|+|++|..|+.. .......+.....+..... ....+.+++.+||..+|++
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 231 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEK 231 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchh
Confidence 9999999888899999999999999999999888744 2333333433333322222 4567899999999999999
Q ss_pred CCChhHHhhhHHH
Q 002843 573 RPTTREILQSEVT 585 (874)
Q Consensus 573 RPTa~EiL~hp~~ 585 (874)
||++.++++||||
T Consensus 232 Rp~~~~~~~~~~~ 244 (244)
T smart00220 232 RLTAEEALQHPFF 244 (244)
T ss_pred ccCHHHHhhCCCC
Confidence 9999999999996
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.5e-26 Score=230.22 Aligned_cols=244 Identities=15% Similarity=0.155 Sum_probs=174.1
Q ss_pred EecCCCCcccccccccccccccccCCChhHHH-HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCce
Q 002843 227 CRGPPLNAFKERRGMIDTKAFVTTTMPSDAAL-KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLR 305 (874)
Q Consensus 227 ~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (874)
+||.|+++|..+.-.+..|.+++--.|..... +-..+.|.+-..+||++.+++.+....... ..|
T Consensus 47 GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt--------------paL 112 (338)
T KOG0668|consen 47 GRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT--------------PSL 112 (338)
T ss_pred cCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC--------------chh
Confidence 55556666654433333344444444443333 334456777777999999988765222111 246
Q ss_pred EeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC-CcEEEeccccchhcccccc
Q 002843 306 QGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-NQVKYIGPIIQKETLESAS 384 (874)
Q Consensus 306 vMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~-~~vKLiDFGlar~~~~~~~ 384 (874)
+.||+++.+...+.. .|+..+++.+++||+.||+|||++||+|||+||.|++|++. -.++|+|+|+|....
T Consensus 113 iFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH---- 184 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH---- 184 (338)
T ss_pred HhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC----
Confidence 899999999887664 58899999999999999999999999999999999999976 459999999987433
Q ss_pred CCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccc
Q 002843 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (874)
Q Consensus 385 ~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~ 464 (874)
+
T Consensus 185 ---------------------------------------------------------------------p---------- 185 (338)
T KOG0668|consen 185 ---------------------------------------------------------------------P---------- 185 (338)
T ss_pred ---------------------------------------------------------------------C----------
Confidence 0
Q ss_pred cCcCCCCCCCCCcccccccccccccccccccccccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchH----HHHH--
Q 002843 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSER----ALAA-- 537 (874)
Q Consensus 465 ~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~----~~~~-- 537 (874)
....+..+.++.|--||.+..-+ |+.+-|+|||||+|..|+..+.||. ....
T Consensus 186 ---------------------~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLV 244 (338)
T KOG0668|consen 186 ---------------------GKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 244 (338)
T ss_pred ---------------------CceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHH
Confidence 00113556778999999998744 8999999999999999999888861 1110
Q ss_pred ----------HHHHhhc--CCCCCCC---------------------CCCCHHHHHHHHHccccCCCCCCChhHHhhhHH
Q 002843 538 ----------AMSDLRD--RILPPSF---------------------LSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (874)
Q Consensus 538 ----------~~~~l~~--~~lpp~~---------------------~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~ 584 (874)
....+.. -.++|.+ .-.+|++.||+.++|.+|..+|+||.|++.|||
T Consensus 245 kIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hpy 324 (338)
T KOG0668|consen 245 KIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPY 324 (338)
T ss_pred HHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCch
Confidence 0111111 1122221 122478899999999999999999999999999
Q ss_pred HHhhHhhh
Q 002843 585 TNEFQEVC 592 (874)
Q Consensus 585 ~~~~~~~~ 592 (874)
|....+..
T Consensus 325 F~~~~~~~ 332 (338)
T KOG0668|consen 325 FAPVREAE 332 (338)
T ss_pred HHHHHHHh
Confidence 99877543
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.4e-26 Score=264.56 Aligned_cols=243 Identities=18% Similarity=0.183 Sum_probs=190.3
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceee--cCcccCCcCCCCCccc
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVS--NGSLDLGARTGVPASC 299 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 299 (874)
|||-+||+.- ..+.++.+...++.-.|..-++.-.+|..-..||+.+.++..... .++++.
T Consensus 33 gkv~k~k~~~-------~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq---------- 95 (953)
T KOG0587|consen 33 GKVYKGRHVK-------TGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ---------- 95 (953)
T ss_pred eeEEEEeeee-------cCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe----------
Confidence 4455555542 455666777777777777778888899999999998888766431 122221
Q ss_pred cCCCceEeeccCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchh
Q 002843 300 WIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (874)
Q Consensus 300 ~~~~~lvMEy~~GgsL~~~L~~-~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~ 378 (874)
.+||||||.|||.-++++. .+..+.|..+..|++.++.||.+||...+||||||-.|||++.++.||++|||++..
T Consensus 96 ---LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQ 172 (953)
T KOG0587|consen 96 ---LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 172 (953)
T ss_pred ---EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeee
Confidence 5789999999999999976 355899999999999999999999999999999999999999999999999999875
Q ss_pred ccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCC
Q 002843 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (874)
Q Consensus 379 ~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~ 458 (874)
+... .
T Consensus 173 ldsT----------------------------------------------------------~----------------- 177 (953)
T KOG0587|consen 173 LDST----------------------------------------------------------V----------------- 177 (953)
T ss_pred eecc----------------------------------------------------------c-----------------
Confidence 4400 0
Q ss_pred cccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC-----CCCCccchhHHHHHHHHhcCCCCchH
Q 002843 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-----VCTTSSNIYSLGVLFFELFGRFDSER 533 (874)
Q Consensus 459 ~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~-----~ys~kSDIwSLGVIL~ELltG~~p~~ 533 (874)
....+.+|||.|||||++... .|+..+|+||||++..||.-|-+|+.
T Consensus 178 ----------------------------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~ 229 (953)
T KOG0587|consen 178 ----------------------------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLC 229 (953)
T ss_pred ----------------------------ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCcc
Confidence 001466899999999999863 37889999999999999999999986
Q ss_pred HHHHHHHHhhc-CCCCCCCCC--C-CHHHHHHHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 534 ALAAAMSDLRD-RILPPSFLS--E-NPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 534 ~~~~~~~~l~~-~~lpp~~~~--~-~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
+.-.+..-+.- +..||.+.. . +.++.+||..||+.|-.+||++.++|+|||+.+
T Consensus 230 DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 230 DMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred CcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 54443333222 334444432 2 256889999999999999999999999999984
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-26 Score=255.11 Aligned_cols=245 Identities=15% Similarity=0.162 Sum_probs=190.2
Q ss_pred CceEEEecCCCCccccccccccccccccc-CCCh-hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccc
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~-~~~~-d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (874)
-+|+||-|.- - ..+.+.+++.++. +.|- .....-++.+.+....||.+|.+.-...-...
T Consensus 576 QFG~VYgg~h----R-ktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~er------------- 637 (888)
T KOG4236|consen 576 QFGTVYGGKH----R-KTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPER------------- 637 (888)
T ss_pred cceeeeccee----c-ccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCce-------------
Confidence 3689998862 1 1234455555554 3333 23445667788888889877766544332222
Q ss_pred cCCCceEeeccCCCCHHHHH-HhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC---CcEEEecccc
Q 002843 300 WIGGLRQGSSDHGVNLREWL-NARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS---NQVKYIGPII 375 (874)
Q Consensus 300 ~~~~~lvMEy~~GgsL~~~L-~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~---~~vKLiDFGl 375 (874)
--+|||-+.| +..+.| ......|++.....++.||+.||.|||-+||+|+||||+||||.+. -++||||||+
T Consensus 638 ---vFVVMEKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGf 713 (888)
T KOG4236|consen 638 ---VFVVMEKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGF 713 (888)
T ss_pred ---EEEEehhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccc
Confidence 2369999985 655555 4444479999999999999999999999999999999999999754 5799999999
Q ss_pred chhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCC
Q 002843 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (874)
Q Consensus 376 ar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d 455 (874)
||.+++..
T Consensus 714 ARiIgEks------------------------------------------------------------------------ 721 (888)
T KOG4236|consen 714 ARIIGEKS------------------------------------------------------------------------ 721 (888)
T ss_pred eeecchhh------------------------------------------------------------------------
Confidence 99766210
Q ss_pred CCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH
Q 002843 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL 535 (874)
Q Consensus 456 ~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~ 535 (874)
|. .+.+|||.|.|||++....|...-||||+|||+|--++|-.||.+.
T Consensus 722 -------------------FR-------------rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 722 -------------------FR-------------RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred -------------------hh-------------hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 00 3679999999999999999999999999999999999999999877
Q ss_pred HHHHHHhhc---CCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 536 AAAMSDLRD---RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 536 ~~~~~~l~~---~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
...-..+.+ -..|..|...++...+||..+|+..-.+|.+....|.|||+++.+...
T Consensus 770 EdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~ 829 (888)
T KOG4236|consen 770 EDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWL 829 (888)
T ss_pred cchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHH
Confidence 666666655 334555777788999999999999999999999999999999876543
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.9e-26 Score=254.66 Aligned_cols=239 Identities=16% Similarity=0.117 Sum_probs=186.4
Q ss_pred ceEEEecCCCCccccccccccccccccc-CCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
+|-||+|.|-+.-+.-+-.. +++.-++ +.+-+....+.++.+++--.||+||+++..... .
T Consensus 402 FGdVy~gvYt~~~kge~iaV-AvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-----------------~ 463 (974)
T KOG4257|consen 402 FGDVYKGVYTDPEKGERIAV-AVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-----------------Q 463 (974)
T ss_pred ccceeeeEecccccCcceee-eeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-----------------c
Confidence 57799998755433222222 2222233 345555667788889999999999988877441 1
Q ss_pred CCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
+-+++||+++-|.|++||+.+...|+......+++||+.||+|||+..+|||||...|||+.+...||++|||++|.+.+
T Consensus 464 P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 23679999999999999998877899999999999999999999999999999999999999999999999999997663
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
+.. -.++
T Consensus 544 ~~y------------------------------------------------------YkaS------------------- 550 (974)
T KOG4257|consen 544 DAY------------------------------------------------------YKAS------------------- 550 (974)
T ss_pred cch------------------------------------------------------hhcc-------------------
Confidence 322 0000
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHHH--HH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERALA--AA 538 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~~--~~ 538 (874)
..+. ..-|||||-+.-..++.+||||-|||++||++. |..||.... ..
T Consensus 551 ----------~~kL-------------------PIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV 601 (974)
T KOG4257|consen 551 ----------RGKL-------------------PIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV 601 (974)
T ss_pred ----------cccc-------------------ceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce
Confidence 0111 247999999999999999999999999999986 888986533 23
Q ss_pred HHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 539 MSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 539 ~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
+..+.++..+|......|.+..|+.+||.+||.+||.+.||..
T Consensus 602 I~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 602 IGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred EEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 4455667677777788899999999999999999999988743
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-26 Score=240.37 Aligned_cols=254 Identities=17% Similarity=0.161 Sum_probs=190.5
Q ss_pred HHHhhcCCceEEEecCCCCccc-ccccccccccccccCCC---hhHHH-HHHHHhHHhhcCCCCCceeccceeecCcccC
Q 002843 215 FVKTTLKGKGIVCRGPPLNAFK-ERRGMIDTKAFVTTTMP---SDAAL-KAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (874)
Q Consensus 215 ~~~~~~kgkGvv~kg~~~~~~~-~~~~~~~~~~~~~~~~~---~d~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 289 (874)
|-...|+-.|.+++|.+|-+.+ ..++.....|+.+-+.- .++.+ .......++++..|+||+++.+....|-
T Consensus 61 F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd--- 137 (361)
T KOG1006|consen 61 FTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD--- 137 (361)
T ss_pred cccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc---
Confidence 3344455556666666655555 34444444444443332 23333 5666788999999999999988553332
Q ss_pred CcCCCCCccccCCCceEeeccCCCCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCceEEec
Q 002843 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNA----RGHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQ 364 (874)
Q Consensus 290 ~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~----~~~~lse~e~~~I~~QIl~aL~yLHs~-gIIHRDLKPsNILL~~ 364 (874)
|| +-||+|+ .||..+-+. ....++|...-+|..-.+.||+||-.. .||||||||+|||++.
T Consensus 138 ---------cW----iCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr 203 (361)
T KOG1006|consen 138 ---------CW----ICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDR 203 (361)
T ss_pred ---------ee----eeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEec
Confidence 33 3799997 898877643 223699999999999999999999865 8999999999999999
Q ss_pred CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCcccccccc
Q 002843 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (874)
Q Consensus 365 ~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~ 444 (874)
.|.+||||||++-.+.++..
T Consensus 204 ~G~vKLCDFGIcGqLv~SiA------------------------------------------------------------ 223 (361)
T KOG1006|consen 204 HGDVKLCDFGICGQLVDSIA------------------------------------------------------------ 223 (361)
T ss_pred CCCEeeecccchHhHHHHHH------------------------------------------------------------
Confidence 99999999999876552211
Q ss_pred ccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC--CCCCCccchhHHHHHH
Q 002843 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLF 522 (874)
Q Consensus 445 ~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g--~~ys~kSDIwSLGVIL 522 (874)
.+.-.|...|||||.+.. ..|+-+|||||||++|
T Consensus 224 --------------------------------------------kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL 259 (361)
T KOG1006|consen 224 --------------------------------------------KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITL 259 (361)
T ss_pred --------------------------------------------hhhccCCccccChhccCCccCCcchhhhhhhhcceE
Confidence 045567789999999875 3499999999999999
Q ss_pred HHhcCCCCchHHHHHHHHHhhcC--CCCCCC------CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 523 FELFGRFDSERALAAAMSDLRDR--ILPPSF------LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 523 ~ELltG~~p~~~~~~~~~~l~~~--~lpp~~------~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
||+.||..|+..+...+.++..- --||.+ ...+..+..||.-||.+|-+.||+..+++.+||+....
T Consensus 260 ~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~ 334 (361)
T KOG1006|consen 260 YEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYA 334 (361)
T ss_pred eeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhh
Confidence 99999999988877777777651 122222 23346789999999999999999999999999998654
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=229.65 Aligned_cols=216 Identities=16% Similarity=0.115 Sum_probs=156.8
Q ss_pred HHHHHhHHhhcCCCCCceeccce---eecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAV---VSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECL 332 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~ 332 (874)
...+...-+.-.+|+.+.+.+.. ..|+.|. .+++..|...|+|.+.|.. .+..+++.+++
T Consensus 65 ~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~--------------~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL 130 (302)
T KOG2345|consen 65 ALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE--------------AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQIL 130 (302)
T ss_pred HHHHHHHHHhhCCcchHHHHHHHHHhhccCcee--------------EEEEeehhccccHHHHHHHHhhcCCccCHHHHH
Confidence 33444455555667777766652 2333333 2679999999999999965 34479999999
Q ss_pred HHHHHHHHHHHHHHHCC--CcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccch
Q 002843 333 YIFRQIVALVDYHHTQG--VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIA 410 (874)
Q Consensus 333 ~I~~QIl~aL~yLHs~g--IIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~ 410 (874)
.||.+|++||.+||+.. ++||||||.|||+..++.+++.|||.+....-... +....
T Consensus 131 ~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~---------------------~~~~a 189 (302)
T KOG2345|consen 131 WIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIE---------------------GSRQA 189 (302)
T ss_pred HHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEee---------------------chHHH
Confidence 99999999999999998 99999999999999999999999998874430000 00000
Q ss_pred hhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccc
Q 002843 411 SAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVS 490 (874)
Q Consensus 411 ~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t 490 (874)
. ......
T Consensus 190 ~-------------------------------------------------------------------------~lQe~a 196 (302)
T KOG2345|consen 190 L-------------------------------------------------------------------------RLQEWA 196 (302)
T ss_pred H-------------------------------------------------------------------------HHHHHH
Confidence 0 000012
Q ss_pred cccccccccCcccccCC---CCCCccchhHHHHHHHHhcCCCCchHHHHHH-----HHHhhcCCCCCCCCCCCHHHHHHH
Q 002843 491 EQLEEKWYASPEELSGG---VCTTSSNIYSLGVLFFELFGRFDSERALAAA-----MSDLRDRILPPSFLSENPKEAGFC 562 (874)
Q Consensus 491 ~~~GT~~Y~APEvl~g~---~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~-----~~~l~~~~lpp~~~~~~p~l~dLi 562 (874)
....|..|+|||.+.-. ..+.++|||||||+||+|+.|-.||+..... +......+-.|+-...+..+.+|+
T Consensus 197 ~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~li 276 (302)
T KOG2345|consen 197 EERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLI 276 (302)
T ss_pred HHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHH
Confidence 33457799999999754 3689999999999999999999999754331 111111233344344567789999
Q ss_pred HHccccCCCCCCChhHHhhh
Q 002843 563 LWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 563 ~~cL~~dP~~RPTa~EiL~h 582 (874)
.+||+.||.+||++.+++.+
T Consensus 277 k~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 277 KSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred HHHhcCCcccCCCHHHHHHH
Confidence 99999999999999999865
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-26 Score=232.30 Aligned_cols=224 Identities=13% Similarity=0.113 Sum_probs=162.8
Q ss_pred ChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHH
Q 002843 253 PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECL 332 (874)
Q Consensus 253 ~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~ 332 (874)
|.+..+.+ ..+.-..|++.+.++..........+ -|...-++||.+|+ -+|.-+|......|+..++.
T Consensus 60 pitalrei---kiL~~lkHenv~nliEic~tk~Tp~~--------r~r~t~ylVf~~ce-hDLaGlLsn~~vr~sls~Ik 127 (376)
T KOG0669|consen 60 PITALREI---KILQLLKHENVVNLIEICRTKATPTN--------RDRATFYLVFDFCE-HDLAGLLSNRKVRFSLSEIK 127 (376)
T ss_pred cHHHHHHH---HHHHHhcchhHHHHHHHHhhccCCcc--------cccceeeeeHHHhh-hhHHHHhcCccccccHHHHH
Confidence 44444444 34555667777666554221111110 12233468999999 69999998876689999999
Q ss_pred HHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 333 YIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 333 ~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
.++.+++.||.|+|...|+|||+||+|+||+.+|.+||+|||+++.+..+.. .
T Consensus 128 k~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n--------------------------~- 180 (376)
T KOG0669|consen 128 KVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKN--------------------------V- 180 (376)
T ss_pred HHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccc--------------------------c-
Confidence 9999999999999999999999999999999999999999999985441000 0
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
.....+..
T Consensus 181 ------------------------------------------------------------------------~kprytnr 188 (376)
T KOG0669|consen 181 ------------------------------------------------------------------------VKPRYTNR 188 (376)
T ss_pred ------------------------------------------------------------------------CCCCcccc
Confidence 00112567
Q ss_pred cccccccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHH-----HHHHHHHhhcCCCCCCCC--------------
Q 002843 493 LEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERA-----LAAAMSDLRDRILPPSFL-------------- 552 (874)
Q Consensus 493 ~GT~~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~-----~~~~~~~l~~~~lpp~~~-------------- 552 (874)
+-|.||++||.+.|.. |+++.|||..|||+.||.++.+-+.. ....+..+...+-+..|+
T Consensus 189 vvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~e 268 (376)
T KOG0669|consen 189 VVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELE 268 (376)
T ss_pred eeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCC
Confidence 8899999999999854 99999999999999999999765522 112333443322111110
Q ss_pred -----------------CCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 553 -----------------SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 553 -----------------~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
...+..++|+.+||..||.+|+++.++|+|.||-.
T Consensus 269 Pl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 269 PLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred CCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 11235679999999999999999999999999974
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7e-26 Score=240.00 Aligned_cols=175 Identities=18% Similarity=0.195 Sum_probs=137.3
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccc
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESA 383 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~ 383 (874)
++|||||. .+|.+.+.. .++-..+..|++|++.|+.|||+.||+||||||+||++..++.+||.|||+|+....
T Consensus 97 y~v~e~m~-~nl~~vi~~---elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~-- 170 (369)
T KOG0665|consen 97 YLVMELMD-ANLCQVILM---ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT-- 170 (369)
T ss_pred HHHHHhhh-hHHHHHHHH---hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCc--
Confidence 56999998 799999983 478889999999999999999999999999999999999999999999999873220
Q ss_pred cCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccccc
Q 002843 384 SLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHT 463 (874)
Q Consensus 384 ~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~ 463 (874)
T Consensus 171 -------------------------------------------------------------------------------- 170 (369)
T KOG0665|consen 171 -------------------------------------------------------------------------------- 170 (369)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH---HHH---
Q 002843 464 NAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA---LAA--- 537 (874)
Q Consensus 464 ~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~---~~~--- 537 (874)
...++..+.|+.|+|||++.+-.|...+||||+||++.||++|..-|.+ ...
T Consensus 171 ----------------------~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~k 228 (369)
T KOG0665|consen 171 ----------------------DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNK 228 (369)
T ss_pred ----------------------ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHH
Confidence 0112678999999999999998899999999999999999998432211 000
Q ss_pred -----------HHHHhhc------------------CCCCCC-C----C---CCCHHHHHHHHHccccCCCCCCChhHHh
Q 002843 538 -----------AMSDLRD------------------RILPPS-F----L---SENPKEAGFCLWQLHPEPLSRPTTREIL 580 (874)
Q Consensus 538 -----------~~~~l~~------------------~~lpp~-~----~---~~~p~l~dLi~~cL~~dP~~RPTa~EiL 580 (874)
.+.++.. ..+|.. | . .....+.+++.+||..||++|.+++++|
T Consensus 229 i~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL 308 (369)
T KOG0665|consen 229 IIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDAL 308 (369)
T ss_pred HHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHh
Confidence 0111110 111111 1 1 1113467999999999999999999999
Q ss_pred hhHHHH
Q 002843 581 QSEVTN 586 (874)
Q Consensus 581 ~hp~~~ 586 (874)
+||||+
T Consensus 309 ~HPY~~ 314 (369)
T KOG0665|consen 309 RHPYIK 314 (369)
T ss_pred cCCeee
Confidence 999998
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-25 Score=221.65 Aligned_cols=161 Identities=19% Similarity=0.154 Sum_probs=127.5
Q ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchh
Q 002843 313 VNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSEN 392 (874)
Q Consensus 313 gsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~ 392 (874)
|+|.++|..++..+++.+++.|++||+.||.|||+++ ||+|||++.++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~----------- 61 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP----------- 61 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc-----------
Confidence 7999999876657999999999999999999999999 999999999999998 998753220
Q ss_pred hhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCC
Q 002843 393 YRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSK 472 (874)
Q Consensus 393 ~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~ 472 (874)
T Consensus 62 -------------------------------------------------------------------------------- 61 (176)
T smart00750 62 -------------------------------------------------------------------------------- 61 (176)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhcCCCCC
Q 002843 473 SSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRDRILPP 549 (874)
Q Consensus 473 s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~~~lpp 549 (874)
....||+.|||||++.+..|+.++|||||||++|||++|..|+.... ..+..+.....+.
T Consensus 62 -----------------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 124 (176)
T smart00750 62 -----------------EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD 124 (176)
T ss_pred -----------------ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccC
Confidence 01246789999999999999999999999999999999999985322 2222222221111
Q ss_pred C------CCCCC--HHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 550 S------FLSEN--PKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 550 ~------~~~~~--p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
. ..... +.+.+|+.+||..+|.+||++.|+++|+|+....
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 125 DPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred CccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 0 00111 2588999999999999999999999999987543
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.6e-26 Score=245.60 Aligned_cols=217 Identities=15% Similarity=0.127 Sum_probs=168.4
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...-.+..||.||..++...-|+... |-|.|||+|-+|.-||+.+. .+++.+++.|+.||
T Consensus 514 AcREyrIHKeLDHpRIVKlYDyfslDtdsF---------------CTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQi 577 (775)
T KOG1151|consen 514 ACREYRIHKELDHPRIVKLYDYFSLDTDSF---------------CTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQI 577 (775)
T ss_pred HHHHHhhhhccCcceeeeeeeeeeeccccc---------------eeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHH
Confidence 345567778899999999999866554322 56999999999999999876 89999999999999
Q ss_pred HHHHHHHHHC--CCcccCCCCCceEEec---CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 339 VALVDYHHTQ--GVTFLDLKPSSFKLLQ---SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 339 l~aL~yLHs~--gIIHRDLKPsNILL~~---~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
+.||.||.+. .|||-||||.||||.. .|.+||+||||++.+.+++.+..
T Consensus 578 VnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~v-------------------------- 631 (775)
T KOG1151|consen 578 VNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSV-------------------------- 631 (775)
T ss_pred HHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcc--------------------------
Confidence 9999999987 5999999999999964 37799999999997774322100
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
.|+ --.....
T Consensus 632 --------------------------------------------------------dGm--------------eLTSQgA 641 (775)
T KOG1151|consen 632 --------------------------------------------------------DGM--------------ELTSQGA 641 (775)
T ss_pred --------------------------------------------------------cce--------------eeecccC
Confidence 000 0013457
Q ss_pred ccccccCcccccCC----CCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhc-------CCCCCCCCCCCHHHHHHH
Q 002843 494 EEKWYASPEELSGG----VCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRD-------RILPPSFLSENPKEAGFC 562 (874)
Q Consensus 494 GT~~Y~APEvl~g~----~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~-------~~lpp~~~~~~p~l~dLi 562 (874)
||.||.+||.+.-+ +.+.++||||+|||+|..+.|+.||.........|.. ..-.|.-+..++...+||
T Consensus 642 GTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFI 721 (775)
T KOG1151|consen 642 GTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFI 721 (775)
T ss_pred ceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHH
Confidence 99999999998754 3789999999999999999999999543322222222 111222334457788999
Q ss_pred HHccccCCCCCCChhHHhhhHHHHh
Q 002843 563 LWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 563 ~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
++||.+--++|....++-.||||..
T Consensus 722 RRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 722 RRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred HHHHHhhhhhhhhHHHHccCccccc
Confidence 9999999999999999999999874
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-25 Score=255.17 Aligned_cols=193 Identities=19% Similarity=0.136 Sum_probs=148.8
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (874)
.|-||||. -++..+.++.|.+-....+.+..+-..+-..++..+|+|||..++.-....+ +..+. .
T Consensus 26 ~g~V~rgr----nketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~---~~~~~-------~ 91 (732)
T KOG4250|consen 26 FGNVYRGR----NKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFL---GLVTR-------L 91 (732)
T ss_pred cceeeeec----ccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCcccc---Ccccc-------c
Confidence 36689986 3444445555544444444555555555566777779999999887554443 12222 2
Q ss_pred CceEeeccCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC--Cc--EEEeccccc
Q 002843 303 GLRQGSSDHGVNLREWLNAR--GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS--NQ--VKYIGPIIQ 376 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~--~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~--~~--vKLiDFGla 376 (874)
..++||||.||||+.+|.++ ...|++.+.+.++..++.||.|||++|||||||||.||++-.. |+ .||+|||.|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 45699999999999999763 2369999999999999999999999999999999999998643 33 799999999
Q ss_pred hhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCC
Q 002843 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (874)
Q Consensus 377 r~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~ 456 (874)
|.+.+..
T Consensus 172 rel~d~s------------------------------------------------------------------------- 178 (732)
T KOG4250|consen 172 RELDDNS------------------------------------------------------------------------- 178 (732)
T ss_pred ccCCCCC-------------------------------------------------------------------------
Confidence 9765221
Q ss_pred CCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchH
Q 002843 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSER 533 (874)
Q Consensus 457 ~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~ 533 (874)
.+++.+||+.|.+||++.. +.|+..+|.|||||++|+++||..||.
T Consensus 179 -------------------------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 179 -------------------------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred -------------------------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 1267899999999999994 789999999999999999999988773
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.4e-25 Score=231.77 Aligned_cols=184 Identities=19% Similarity=0.166 Sum_probs=148.3
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccc
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESA 383 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~ 383 (874)
..|.||++||+|--.+++.. +|+++.++.+-..|+.||.|||++|||.||||.+|+||+..|++|++|+|++++-..+
T Consensus 327 ffvieyv~ggdlmfhmqrqr-klpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~- 404 (593)
T KOG0695|consen 327 FFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP- 404 (593)
T ss_pred EEEEEEecCcceeeehhhhh-cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCC-
Confidence 35899999999987776654 8999999999999999999999999999999999999999999999999999842200
Q ss_pred cCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccccc
Q 002843 384 SLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHT 463 (874)
Q Consensus 384 ~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~ 463 (874)
..
T Consensus 405 -------------------------------------------------------gd----------------------- 406 (593)
T KOG0695|consen 405 -------------------------------------------------------GD----------------------- 406 (593)
T ss_pred -------------------------------------------------------Cc-----------------------
Confidence 00
Q ss_pred ccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH---------
Q 002843 464 NAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--------- 534 (874)
Q Consensus 464 ~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--------- 534 (874)
..++.+|||.|+|||++.|..|++.+|.|+|||++|||+.|+.||.-
T Consensus 407 ------------------------~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~n 462 (593)
T KOG0695|consen 407 ------------------------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMN 462 (593)
T ss_pred ------------------------ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccc
Confidence 01467999999999999999999999999999999999999999832
Q ss_pred HHH-HHHHhh-cCCCCCCCCCCCHHHHHHHHHccccCCCCCC------ChhHHhhhHHHHhhHhhhh
Q 002843 535 LAA-AMSDLR-DRILPPSFLSENPKEAGFCLWQLHPEPLSRP------TTREILQSEVTNEFQEVCA 593 (874)
Q Consensus 535 ~~~-~~~~l~-~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP------Ta~EiL~hp~~~~~~~~~~ 593 (874)
... .++.+. ..+.-|. +.+.+...+++..|.+||.+|. .++++-.|+||+.+.+...
T Consensus 463 tedylfqvilekqiripr--slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~l 527 (593)
T KOG0695|consen 463 TEDYLFQVILEKQIRIPR--SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLL 527 (593)
T ss_pred hhHHHHHHHhhhcccccc--eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHH
Confidence 111 122222 2222222 2344567899999999999994 3689999999998887664
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-25 Score=247.75 Aligned_cols=214 Identities=14% Similarity=0.121 Sum_probs=169.7
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
-++++..|....+|-||.++-....+-.. +..||-|-||.|...|..++ .|+...++.|+.-+
T Consensus 467 v~sEr~Im~~~~s~fIvrLYrTfrd~kyv----------------YmLmEaClGGElWTiLrdRg-~Fdd~tarF~~acv 529 (732)
T KOG0614|consen 467 VFSERNIMMECRSDFIVRLYRTFRDSKYV----------------YMLMEACLGGELWTILRDRG-SFDDYTARFYVACV 529 (732)
T ss_pred HHhHHHHHHhcCchHHHHHHHHhccchhh----------------hhhHHhhcCchhhhhhhhcC-CcccchhhhhHHHH
Confidence 45566666666677777666554322222 34799999999999999988 89999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
++|++|||++|||.|||||+|.||+..|.+||.|||+|+.+...
T Consensus 530 ~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g------------------------------------ 573 (732)
T KOG0614|consen 530 LEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG------------------------------------ 573 (732)
T ss_pred HHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccC------------------------------------
Confidence 99999999999999999999999999999999999999966510
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
...-+.+|||.|
T Consensus 574 --------------------------------------------------------------------~KTwTFcGTpEY 585 (732)
T KOG0614|consen 574 --------------------------------------------------------------------RKTWTFCGTPEY 585 (732)
T ss_pred --------------------------------------------------------------------CceeeecCCccc
Confidence 001367999999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHH--HHHhhcCCCCCCCCCC-CHHHHHHHHHccccCCCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAA--MSDLRDRILPPSFLSE-NPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~--~~~l~~~~lpp~~~~~-~p~l~dLi~~cL~~dP~~RPT 575 (874)
.|||++.....+.++|.||||+++|||++|.+||.....+ ...+..++-.-.|+.. .....+||+++...+|.+|..
T Consensus 586 VAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 586 VAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 9999999999999999999999999999999999654332 2333333322222222 233668999999999999976
Q ss_pred -----hhHHhhhHHHHhhHhhhh
Q 002843 576 -----TREILQSEVTNEFQEVCA 593 (874)
Q Consensus 576 -----a~EiL~hp~~~~~~~~~~ 593 (874)
+.+|-.|.||.++.+.-.
T Consensus 666 ~~~~gI~DIkkH~Wf~gfdwegl 688 (732)
T KOG0614|consen 666 YQKGGINDIKKHRWFEGFDWEGL 688 (732)
T ss_pred cccCChHHHHhhhhhhcCChhhh
Confidence 789999999999887653
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-25 Score=255.15 Aligned_cols=241 Identities=13% Similarity=0.144 Sum_probs=187.6
Q ss_pred eEEEecCCCCcccccccccccccccccCCChhH-HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCC
Q 002843 224 GIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDA-ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (874)
Q Consensus 224 Gvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (874)
|-||+|.. ..+..|+.-.+++.++.-..-.+ ..++.++..|..-.|||++.+...+.---..
T Consensus 643 GEVc~GrL--k~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~Pv--------------- 705 (996)
T KOG0196|consen 643 GEVCSGRL--KLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPV--------------- 705 (996)
T ss_pred cceecccc--cCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCcee---------------
Confidence 55777763 22344555555555554333333 3377888999999999999887775522222
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcccc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLES 382 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~ 382 (874)
-++.|||++|+|..||+++...|+..+...+++.|+.|+.||-++|+|||||...|||++.+-.+|++|||++|.+.++
T Consensus 706 -MIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 706 -MIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred -EEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccC
Confidence 2489999999999999988778999999999999999999999999999999999999999999999999999966532
Q ss_pred ccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccc
Q 002843 383 ASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHH 462 (874)
Q Consensus 383 ~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~ 462 (874)
.. +.. +-
T Consensus 785 ~~-------------------------------------------------------~~y-tt----------------- 791 (996)
T KOG0196|consen 785 PE-------------------------------------------------------AAY-TT----------------- 791 (996)
T ss_pred CC-------------------------------------------------------ccc-cc-----------------
Confidence 10 000 00
Q ss_pred cccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchH--HHHHHH
Q 002843 463 TNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSER--ALAAAM 539 (874)
Q Consensus 463 ~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~--~~~~~~ 539 (874)
...+.| ..|.|||.+...++|.+|||||+||+|||.++ |-.|+. .....+
T Consensus 792 --------~GGKIP-------------------iRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVI 844 (996)
T KOG0196|consen 792 --------LGGKIP-------------------IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 844 (996)
T ss_pred --------cCCccc-------------------eeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHH
Confidence 001112 47899999999999999999999999999986 877763 344567
Q ss_pred HHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 540 SDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 540 ~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+.+.++..-|........+..||++||++|-..||++.||+.+
T Consensus 845 kaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 845 KAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred HHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 8888877666667778889999999999999999999999864
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-24 Score=251.12 Aligned_cols=182 Identities=14% Similarity=0.084 Sum_probs=132.9
Q ss_pred CceEeeccCCCCHHHHHHhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCc
Q 002843 303 GLRQGSSDHGVNLREWLNARG-----------------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSS 359 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~-----------------------~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsN 359 (874)
.+|||||+++++|.++|.... ..+++..++.|+.||+.+|.|||+++|+||||||+|
T Consensus 260 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~N 339 (507)
T PLN03224 260 QWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPEN 339 (507)
T ss_pred eEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHh
Confidence 579999999999999996421 124567889999999999999999999999999999
Q ss_pred eEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccc
Q 002843 360 FKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIE 439 (874)
Q Consensus 360 ILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~ 439 (874)
||++.++.+||+|||+++.+...
T Consensus 340 ILl~~~~~~kL~DFGla~~~~~~--------------------------------------------------------- 362 (507)
T PLN03224 340 LLVTVDGQVKIIDFGAAVDMCTG--------------------------------------------------------- 362 (507)
T ss_pred EEECCCCcEEEEeCcCccccccC---------------------------------------------------------
Confidence 99999999999999998633200
Q ss_pred cccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCC-----------
Q 002843 440 TANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV----------- 508 (874)
Q Consensus 440 ~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~----------- 508 (874)
.. .......+|+.|+|||++....
T Consensus 363 -~~--------------------------------------------~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~ 397 (507)
T PLN03224 363 -IN--------------------------------------------FNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMA 397 (507)
T ss_pred -Cc--------------------------------------------cCccccCCCcceeChhhhcCCCCCCccchhhhh
Confidence 00 0001224478999999886422
Q ss_pred ---------CC--CccchhHHHHHHHHhcCCCC-chHHHHHHHHH-------------hh-cCCCCCCCCCCCHHHHHHH
Q 002843 509 ---------CT--TSSNIYSLGVLFFELFGRFD-SERALAAAMSD-------------LR-DRILPPSFLSENPKEAGFC 562 (874)
Q Consensus 509 ---------ys--~kSDIwSLGVIL~ELltG~~-p~~~~~~~~~~-------------l~-~~~lpp~~~~~~p~l~dLi 562 (874)
|+ .+.||||+|||||+|++|.. |+......... .. .....+.+...++..++|+
T Consensus 398 ~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi 477 (507)
T PLN03224 398 ALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLA 477 (507)
T ss_pred hhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHH
Confidence 11 34799999999999999853 55322111101 11 1111222344567789999
Q ss_pred HHccccCC---CCCCChhHHhhhHHHH
Q 002843 563 LWQLHPEP---LSRPTTREILQSEVTN 586 (874)
Q Consensus 563 ~~cL~~dP---~~RPTa~EiL~hp~~~ 586 (874)
.+||..+| .+|+|+.|+|+||||.
T Consensus 478 ~~LL~~~~~~~~~RlSa~eaL~Hp~f~ 504 (507)
T PLN03224 478 CKLITKRDQANRGRLSVGQALSHRFFL 504 (507)
T ss_pred HHHhccCCCCcccCCCHHHHhCCCCcC
Confidence 99999866 6899999999999995
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-24 Score=240.64 Aligned_cols=234 Identities=17% Similarity=0.150 Sum_probs=181.7
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (874)
+|-||-|. ++...-.+..|+.. ...|....++++++.|....|||.|+++......-..
T Consensus 280 YGeVYeGv----WKkyslTvAVKtLK--EDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF--------------- 338 (1157)
T KOG4278|consen 280 YGEVYEGV----WKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF--------------- 338 (1157)
T ss_pred ccceeeee----eeccceeeehhhhh--hcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe---------------
Confidence 46677776 33222223332222 2246667788888999999999999887764322222
Q ss_pred CceEeeccCCCCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 303 GLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~-~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
+++.|||..|+|.+||++.++ .++....+.++.||..|+.||..+++|||||...|+|+.++..||++||||++.+..
T Consensus 339 -YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtg 417 (1157)
T KOG4278|consen 339 -YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTG 417 (1157)
T ss_pred -EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcC
Confidence 469999999999999987543 688888899999999999999999999999999999999999999999999997663
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
++. + .|
T Consensus 418 DTY---------------------------------------------------------T---------AH-------- 423 (1157)
T KOG4278|consen 418 DTY---------------------------------------------------------T---------AH-------- 423 (1157)
T ss_pred Cce---------------------------------------------------------e---------cc--------
Confidence 221 0 00
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchH--HHHHH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSER--ALAAA 538 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~--~~~~~ 538 (874)
...+|| .-|.|||-+....++.++|||+|||+|||+.| |..|+. +....
T Consensus 424 ---------AGAKFP-------------------IKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqV 475 (1157)
T KOG4278|consen 424 ---------AGAKFP-------------------IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 475 (1157)
T ss_pred ---------cCccCc-------------------ccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHH
Confidence 023444 36899999999899999999999999999997 777764 34455
Q ss_pred HHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHh
Q 002843 539 MSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREIL 580 (874)
Q Consensus 539 ~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL 580 (874)
+.-|..++.-.....+.|++..||+.||++.|++||+++||-
T Consensus 476 Y~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 476 YGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred HHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 566666776666777889999999999999999999999983
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-25 Score=246.10 Aligned_cols=245 Identities=16% Similarity=0.113 Sum_probs=170.2
Q ss_pred eEEEecCCCCccc---ccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCcc--
Q 002843 224 GIVCRGPPLNAFK---ERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS-- 298 (874)
Q Consensus 224 Gvv~kg~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 298 (874)
|..++|.++++.- ..+++..+++.|+-...|-..-+.....|-.-+.. -..+-.||+ .+...
T Consensus 438 ~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~A---------D~Edk~Hcl----rl~r~F~ 504 (752)
T KOG0670|consen 438 GYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDA---------DPEDKFHCL----RLFRHFK 504 (752)
T ss_pred eccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhcc---------CchhhhHHH----HHHHHhh
Confidence 3334444444443 45777788888888777776665544433222211 111223332 11111
Q ss_pred ccCCCceEeeccCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC-CcEEEecccc
Q 002843 299 CWIGGLRQGSSDHGVNLREWLNARGH--KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-NQVKYIGPII 375 (874)
Q Consensus 299 ~~~~~~lvMEy~~GgsL~~~L~~~~~--~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~-~~vKLiDFGl 375 (874)
+....|||.|-.. .+|+++|++.|. .|....++.|+.|++.||..|-.+||+|.||||+|||++++ +.+||||||.
T Consensus 505 hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 505 HKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred hcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcc
Confidence 2334689999886 899999998765 68888999999999999999999999999999999999976 5589999998
Q ss_pred chhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCC
Q 002843 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (874)
Q Consensus 376 ar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d 455 (874)
|.... ++.
T Consensus 584 A~~~~--------------------------------------------------------------ene---------- 591 (752)
T KOG0670|consen 584 ASFAS--------------------------------------------------------------ENE---------- 591 (752)
T ss_pred ccccc--------------------------------------------------------------ccc----------
Confidence 76433 111
Q ss_pred CCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchH--
Q 002843 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSER-- 533 (874)
Q Consensus 456 ~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~-- 533 (874)
++.++-+..|+|||++.|.+|+...|+||+||+||||.||..-|.
T Consensus 592 ---------------------------------itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 592 ---------------------------------ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred ---------------------------------ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 145667789999999999999999999999999999999943331
Q ss_pred ---HHHHHHHHhhc---------CC-------------------------------CCC------------CCCCCC---
Q 002843 534 ---ALAAAMSDLRD---------RI-------------------------------LPP------------SFLSEN--- 555 (874)
Q Consensus 534 ---~~~~~~~~l~~---------~~-------------------------------lpp------------~~~~~~--- 555 (874)
....++..+.. +. +.| .+....
T Consensus 639 TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~ 718 (752)
T KOG0670|consen 639 TNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKI 718 (752)
T ss_pred CcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHH
Confidence 11111111111 00 011 112222
Q ss_pred -HHHHHHHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 556 -PKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 556 -p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
..+.+|+.+||..||++|.|..++|.||||.+
T Consensus 719 ~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 719 VQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 23679999999999999999999999999974
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-24 Score=267.96 Aligned_cols=192 Identities=17% Similarity=0.151 Sum_probs=142.8
Q ss_pred HhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Q 002843 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL 342 (874)
...++...||+++.++.....+.. .+++||||+||+|.++++ .+++.++..|+.||+.||
T Consensus 734 ~~~l~~l~HpnIv~~~~~~~~~~~----------------~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L 793 (968)
T PLN00113 734 IADMGKLQHPNIVKLIGLCRSEKG----------------AYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKAL 793 (968)
T ss_pred HHHHhhCCCCCcceEEEEEEcCCC----------------CEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHH
Confidence 345667789999999887653322 257999999999999995 388999999999999999
Q ss_pred HHHH---HCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 343 DYHH---TQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 343 ~yLH---s~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
+||| +.+|+||||||+||+++.++..++. ||......
T Consensus 794 ~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~--------------------------------------- 833 (968)
T PLN00113 794 RFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC--------------------------------------- 833 (968)
T ss_pred HHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc---------------------------------------
Confidence 9999 6699999999999999988877764 44332100
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
. .....||+.|+
T Consensus 834 ------------------------------------------------------------~--------~~~~~~t~~y~ 845 (968)
T PLN00113 834 ------------------------------------------------------------T--------DTKCFISSAYV 845 (968)
T ss_pred ------------------------------------------------------------c--------CCCcccccccc
Confidence 0 01235788999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH-------HHHHH-hhc----CCCCCCC----CCC---CHHHHH
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA-------AAMSD-LRD----RILPPSF----LSE---NPKEAG 560 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~-------~~~~~-l~~----~~lpp~~----~~~---~p~l~d 560 (874)
|||++.+..|+.++|||||||++|||++|+.|+.... ..... ... ....+.. ... ...+.+
T Consensus 846 aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (968)
T PLN00113 846 APETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMN 925 (968)
T ss_pred CcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHH
Confidence 9999999899999999999999999999998873210 00000 000 1111111 111 124678
Q ss_pred HHHHccccCCCCCCChhHHhhh
Q 002843 561 FCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 561 Li~~cL~~dP~~RPTa~EiL~h 582 (874)
++.+||+.+|++||++.|+++.
T Consensus 926 l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 926 LALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred HHHhhCcCCchhCcCHHHHHHH
Confidence 9999999999999999999765
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.2e-24 Score=241.17 Aligned_cols=273 Identities=14% Similarity=0.051 Sum_probs=201.2
Q ss_pred CCccCccccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCCCh-hHHHHHHHHhHH
Q 002843 189 DGLSGNMLSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMV 266 (874)
Q Consensus 189 ~~~~~~~~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~l~ 266 (874)
.+-.-|.|+.+.|.. +.|..+. +|||.||.+-. +.-.-...+++-++.+... ....++.++..|
T Consensus 100 ~~~lkclIpee~i~l~e~LG~Gs------------FgvV~rg~Wt~--psgk~V~VAVKclr~d~l~~~mddflrEas~M 165 (1039)
T KOG0199|consen 100 SIDLKCLIPEEQIKLYELLGEGS------------FGVVKRGTWTQ--PSGKHVNVAVKCLRDDSLNAIMDDFLREASHM 165 (1039)
T ss_pred CCCcceeccHHHHHHHHHhcCcc------------eeeEeeccccC--CCCcEEeEEEEeccCCccchhHHHHHHHHHHH
Confidence 344556777776655 5555543 49999998532 2223344555555665544 334466677777
Q ss_pred hhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHH
Q 002843 267 ASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYH 345 (874)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~-~~~~lse~e~~~I~~QIl~aL~yL 345 (874)
-...|++.+.++..+.. -. .-+|||+|++|+|.+.|.+ ....|.......|+.||+.|+.||
T Consensus 166 ~~L~H~hliRLyGvVl~-qp----------------~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YL 228 (1039)
T KOG0199|consen 166 LKLQHPHLIRLYGVVLD-QP----------------AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYL 228 (1039)
T ss_pred HhccCcceeEEeeeecc-ch----------------hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHH
Confidence 88899999999887663 11 1358999999999999987 444788889999999999999999
Q ss_pred HHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccc
Q 002843 346 HTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSR 425 (874)
Q Consensus 346 Hs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~ 425 (874)
.++++|||||-..|+||.....|||+||||.+.+...
T Consensus 229 eskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n------------------------------------------- 265 (1039)
T KOG0199|consen 229 ESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN------------------------------------------- 265 (1039)
T ss_pred hhhhhhhhhhhhhhheecccceeeeecccceeccCCC-------------------------------------------
Confidence 9999999999999999999999999999999865511
Q ss_pred ccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccccc
Q 002843 426 WWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS 505 (874)
Q Consensus 426 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~ 505 (874)
.|.+. ++ . ..--...|+|||.+.
T Consensus 266 ----------------------------ed~Yv-----------m~----------p--------~rkvPfAWCaPEsLr 288 (1039)
T KOG0199|consen 266 ----------------------------EDMYV-----------MA----------P--------QRKVPFAWCAPESLR 288 (1039)
T ss_pred ----------------------------CcceE-----------ec----------C--------CCcCcccccCHhHhc
Confidence 00000 00 0 001124789999999
Q ss_pred CCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 506 GGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 506 g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
...++.+||||+|||+||||++ |..||.. -...+..+..+..-+........+.++++.||..+|++|||+..|.+.
T Consensus 289 h~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 289 HRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred cccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 9999999999999999999998 6778743 233455555555555555666789999999999999999999999877
Q ss_pred HHHHhhHhhh
Q 002843 583 EVTNEFQEVC 592 (874)
Q Consensus 583 p~~~~~~~~~ 592 (874)
-++.+.....
T Consensus 369 ~~l~eaqp~~ 378 (1039)
T KOG0199|consen 369 LVLAEAQPAV 378 (1039)
T ss_pred HHHHhcCCce
Confidence 6766655443
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.7e-23 Score=246.59 Aligned_cols=202 Identities=16% Similarity=0.152 Sum_probs=160.5
Q ss_pred HHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------------CCC
Q 002843 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKG 326 (874)
Q Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---------------~~l 326 (874)
.+.+...-.|++++.++.....++.. ++++|||+.|+|.+||++.. ..+
T Consensus 352 l~~m~~~g~H~niv~llG~~t~~~~~----------------~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L 415 (609)
T KOG0200|consen 352 LNVLKELGKHPNIVNLLGACTQDGPL----------------YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDAL 415 (609)
T ss_pred HHHHHHhcCCcchhhheeeeccCCce----------------EEEEEeccCCcHHHHHHhccccccccccCCCccccCCc
Confidence 34555566688888777765543332 46999999999999998765 249
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhcc
Q 002843 327 KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFT 406 (874)
Q Consensus 327 se~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg 406 (874)
+..+.+.++.||+.|++||++..+|||||-..|||+..+..+|++|||++++...+..
T Consensus 416 ~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~---------------------- 473 (609)
T KOG0200|consen 416 TTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDY---------------------- 473 (609)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCc----------------------
Confidence 9999999999999999999999999999999999999999999999999985441100
Q ss_pred ccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccc
Q 002843 407 TGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQS 486 (874)
Q Consensus 407 ~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~ 486 (874)
. ..
T Consensus 474 --------------------------------------------------y-------------~~-------------- 476 (609)
T KOG0200|consen 474 --------------------------------------------------Y-------------RT-------------- 476 (609)
T ss_pred --------------------------------------------------e-------------Ee--------------
Confidence 0 00
Q ss_pred cccccccc--cccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH---HHHHHHHhhcCCCCCCCCCCCHHHHH
Q 002843 487 TSVSEQLE--EKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA---LAAAMSDLRDRILPPSFLSENPKEAG 560 (874)
Q Consensus 487 ~~~t~~~G--T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~---~~~~~~~l~~~~lpp~~~~~~p~l~d 560 (874)
....| ...|||||.+....|+.+||||||||+|||+++ |-.|+.. ....+..++.+...+......+++.+
T Consensus 477 ---~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~ 553 (609)
T KOG0200|consen 477 ---KSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYD 553 (609)
T ss_pred ---cCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHH
Confidence 00000 125999999999889999999999999999998 6666653 44446678887777766666888999
Q ss_pred HHHHccccCCCCCCChhHHhh
Q 002843 561 FCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 561 Li~~cL~~dP~~RPTa~EiL~ 581 (874)
+|+.||+.+|++||++.++.+
T Consensus 554 iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 554 LMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHHhCCCcccCCCHHHHHH
Confidence 999999999999999998854
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-23 Score=232.40 Aligned_cols=227 Identities=14% Similarity=0.107 Sum_probs=164.3
Q ss_pred ccccccccccCCChhH-HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHH
Q 002843 241 MIDTKAFVTTTMPSDA-ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWL 319 (874)
Q Consensus 241 ~~~~~~~~~~~~~~d~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L 319 (874)
...+.+..+++.-.+. ..+..+.+.|...+|||++.+...-.-|... |++||||++|+|.+||
T Consensus 563 lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePi----------------cmI~EYmEnGDLnqFl 626 (807)
T KOG1094|consen 563 LKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPL----------------CMITEYMENGDLNQFL 626 (807)
T ss_pred eEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCch----------------HHHHHHHhcCcHHHHH
Confidence 3344444444433333 4455666778888999999998886544443 5589999999999999
Q ss_pred HhCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcc
Q 002843 320 NARGHK-GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRR 398 (874)
Q Consensus 320 ~~~~~~-lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r 398 (874)
.++..+ +.-.....|+.||+.|++||.+.++|||||.+.|+|++.++++||+|||++|.+..
T Consensus 627 ~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys----------------- 689 (807)
T KOG1094|consen 627 SAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS----------------- 689 (807)
T ss_pred HhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCccccccccc-----------------
Confidence 887433 35566778999999999999999999999999999999999999999999984430
Q ss_pred cchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcc
Q 002843 399 SAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLV 478 (874)
Q Consensus 399 ~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~ 478 (874)
.|..-.
T Consensus 690 -------------------------------------------------------g~yy~v------------------- 695 (807)
T KOG1094|consen 690 -------------------------------------------------------GDYYRV------------------- 695 (807)
T ss_pred -------------------------------------------------------CCceee-------------------
Confidence 000000
Q ss_pred cccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC--CCCchHHHHH--HHHHhh----c---CCC
Q 002843 479 SNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG--RFDSERALAA--AMSDLR----D---RIL 547 (874)
Q Consensus 479 ~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt--G~~p~~~~~~--~~~~l~----~---~~l 547 (874)
....+-...|||||.+.-++++++||+|+|||++||+++ ...|+..... ...+.. . ...
T Consensus 696 ----------qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~ 765 (807)
T KOG1094|consen 696 ----------QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV 765 (807)
T ss_pred ----------ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee
Confidence 012233468999999999999999999999999999875 5677754332 122211 1 112
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHH
Q 002843 548 PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (874)
Q Consensus 548 pp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~ 586 (874)
++...-....+.++|++||..|-++||+++++ |-+|.
T Consensus 766 l~~P~~cp~~lyelml~Cw~~es~~RPsFe~l--h~~lq 802 (807)
T KOG1094|consen 766 LSRPPACPQGLYELMLRCWRRESEQRPSFEQL--HLFLQ 802 (807)
T ss_pred ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHH--HHHHH
Confidence 22333334568899999999999999999998 44444
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.5e-23 Score=226.85 Aligned_cols=120 Identities=23% Similarity=0.332 Sum_probs=86.6
Q ss_pred cccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCC---CCch-------
Q 002843 463 TNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE------- 532 (874)
Q Consensus 463 ~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG---~~p~------- 532 (874)
...|++|||. .|... ..+|.-+.|+.|+|||++.|..|++.+||||++|++|||+|| |.|.
T Consensus 391 i~vKIaDlGN-----ACW~~----khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~r 461 (590)
T KOG1290|consen 391 IRVKIADLGN-----ACWVH----KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSR 461 (590)
T ss_pred eeEEEeeccc-----hhhhh----hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCc
Confidence 3678888888 44433 334677899999999999999999999999999999999999 5553
Q ss_pred -HHHHHHHHHhhcCC--------------------------C--CC---------CCCCCC-HHHHHHHHHccccCCCCC
Q 002843 533 -RALAAAMSDLRDRI--------------------------L--PP---------SFLSEN-PKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 533 -~~~~~~~~~l~~~~--------------------------l--pp---------~~~~~~-p~l~dLi~~cL~~dP~~R 573 (874)
+++.+.+..+...+ | .| .|.... ..+.+|+.-||+.+|++|
T Consensus 462 DEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR 541 (590)
T KOG1290|consen 462 DEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKR 541 (590)
T ss_pred cHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCcccc
Confidence 22322222222111 0 00 011111 246799999999999999
Q ss_pred CChhHHhhhHHHHhhHhh
Q 002843 574 PTTREILQSEVTNEFQEV 591 (874)
Q Consensus 574 PTa~EiL~hp~~~~~~~~ 591 (874)
|||.++|+|||++.....
T Consensus 542 ~tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 542 PTAAQCLKHPWLNPVAGP 559 (590)
T ss_pred ccHHHHhcCccccCCCCC
Confidence 999999999999976543
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-24 Score=222.32 Aligned_cols=218 Identities=19% Similarity=0.164 Sum_probs=160.5
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
+.+.+.+++..-+|.|....++... ...++ +.+.-+++.|+|. .+|...|-... .++...+.-+++|
T Consensus 98 rvFre~kmLcfFkHdNVLSaLDILQ---------Pph~d--fFqEiYV~TELmQ-SDLHKIIVSPQ-~Ls~DHvKVFlYQ 164 (449)
T KOG0664|consen 98 RVFREIKMLSSFRHDNVLSLLDILQ---------PANPS--FFQELYVLTELMQ-SDLHKIIVSPQ-ALTPDHVKVFVYQ 164 (449)
T ss_pred HHHHHHHHHHhhccccHHHHHHhcC---------CCCch--HHHHHHHHHHHHH-hhhhheeccCC-CCCcchhhhhHHH
Confidence 3455567777777777666655432 11111 2233467888887 79999988776 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||+.||.||||||.|.|++++..+||||||+++...-+
T Consensus 165 ILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d----------------------------------- 209 (449)
T KOG0664|consen 165 ILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR----------------------------------- 209 (449)
T ss_pred HHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh-----------------------------------
Confidence 999999999999999999999999999999999999999843300
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
+ ...++..+-|.+
T Consensus 210 -------------------------------------~------------------------------~~hMTqEVVTQY 222 (449)
T KOG0664|consen 210 -------------------------------------D------------------------------RLNMTHEVVTQY 222 (449)
T ss_pred -------------------------------------h------------------------------hhhhHHHHHHHH
Confidence 0 011245677889
Q ss_pred ccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHH------HHH-----------HHH---------HhhcCCCCCC
Q 002843 498 YASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERA------LAA-----------AMS---------DLRDRILPPS 550 (874)
Q Consensus 498 Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~------~~~-----------~~~---------~l~~~~lpp~ 550 (874)
|+|||++.|.. |+.+.||||+|||+.||+..+--|.. ... .|. .++....+|.
T Consensus 223 YRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps 302 (449)
T KOG0664|consen 223 YRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPD 302 (449)
T ss_pred hccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCC
Confidence 99999999965 99999999999999999987543311 110 111 1222333444
Q ss_pred CCCC---------CHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 551 FLSE---------NPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 551 ~~~~---------~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
+... .....+++..+|++||.+|.+.++++.|+++.+.+-
T Consensus 303 ~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~ 351 (449)
T KOG0664|consen 303 TQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRL 351 (449)
T ss_pred ccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccce
Confidence 3211 134568899999999999999999999999987653
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.1e-23 Score=225.77 Aligned_cols=237 Identities=11% Similarity=0.032 Sum_probs=163.1
Q ss_pred hhcCCceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhH--HhhcCCCCCceeccceeecCcccCCcCCCC
Q 002843 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMM--VASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (874)
Q Consensus 218 ~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (874)
..-.++|.||||++.+.+- +++... ..++....+++.+ +--..|++|+.++.+...-+..
T Consensus 218 i~~Grfg~V~KaqL~~~~V-------AVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-------- 279 (534)
T KOG3653|consen 218 IGRGRFGCVWKAQLDNRLV-------AVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-------- 279 (534)
T ss_pred hhcCccceeehhhccCcee-------EEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc--------
Confidence 3344668888888654322 222211 1234445555533 3356788999998874422211
Q ss_pred CccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCcccCCCCCceEEecCC
Q 002843 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ---------GVTFLDLKPSSFKLLQSN 366 (874)
Q Consensus 296 ~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~---------gIIHRDLKPsNILL~~~~ 366 (874)
.-...||+||.+.|+|.+||+.+ .+++.+..+|+..++.||+|||+. .|+|||||..|||+..++
T Consensus 280 ----~~eywLVt~fh~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl 353 (534)
T KOG3653|consen 280 ----RMEYWLVTEFHPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL 353 (534)
T ss_pred ----ccceeEEeeeccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC
Confidence 12347899999999999999998 699999999999999999999963 599999999999999999
Q ss_pred cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCcccccccccc
Q 002843 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (874)
Q Consensus 367 ~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l 446 (874)
+..|+|||+|..+. .+. .
T Consensus 354 TccIaDFGLAl~~~-p~~---------------------------------------------------------~---- 371 (534)
T KOG3653|consen 354 TCCIADFGLALRLE-PGK---------------------------------------------------------P---- 371 (534)
T ss_pred cEEeeccceeEEec-CCC---------------------------------------------------------C----
Confidence 99999999987543 000 0
Q ss_pred ccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCC-CC-----CccchhHHHH
Q 002843 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-CT-----TSSNIYSLGV 520 (874)
Q Consensus 447 ~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~-ys-----~kSDIwSLGV 520 (874)
.......+||..|||||++.|.. +. .+.||||+|.
T Consensus 372 ---------------------------------------~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgL 412 (534)
T KOG3653|consen 372 ---------------------------------------QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGL 412 (534)
T ss_pred ---------------------------------------CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHH
Confidence 00013479999999999999843 22 4799999999
Q ss_pred HHHHhcCCC------------CchHH-------HHHHHHHhhcCCCCCCCCCCC------HHHHHHHHHccccCCCCCCC
Q 002843 521 LFFELFGRF------------DSERA-------LAAAMSDLRDRILPPSFLSEN------PKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 521 IL~ELltG~------------~p~~~-------~~~~~~~l~~~~lpp~~~~~~------p~l~dLi~~cL~~dP~~RPT 575 (874)
|||||++.. .||+. ...+...+.+....|.++..+ ..+++.|..||..||+-|.|
T Consensus 413 VLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLT 492 (534)
T KOG3653|consen 413 VLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLT 492 (534)
T ss_pred HHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhh
Confidence 999999852 23321 111111222222223332222 34789999999999999999
Q ss_pred hhHH
Q 002843 576 TREI 579 (874)
Q Consensus 576 a~Ei 579 (874)
+.=+
T Consensus 493 A~Cv 496 (534)
T KOG3653|consen 493 AGCV 496 (534)
T ss_pred hHHH
Confidence 9654
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-22 Score=222.48 Aligned_cols=247 Identities=16% Similarity=0.148 Sum_probs=168.6
Q ss_pred HhhcCCceEEEecCCCCccc-cccccccccc-ccccCCCh-hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCC
Q 002843 217 KTTLKGKGIVCRGPPLNAFK-ERRGMIDTKA-FVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGART 293 (874)
Q Consensus 217 ~~~~kgkGvv~kg~~~~~~~-~~~~~~~~~~-~~~~~~~~-d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (874)
.++..--++|+||.||++.. .-|+++.+++ +-.++.++ .+...+-...| ..|+||.+++.+-..+..
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvm---LRHENILgFIaaD~~~~g------- 279 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVM---LRHENILGFIAADNKDNG------- 279 (513)
T ss_pred hheeEEEEEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHH---hccchhhhhhhccccCCC-------
Confidence 34444567788888888887 3355555544 44443222 22223333333 469999999887432221
Q ss_pred CCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCcccCCCCCceEEecC
Q 002843 294 GVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ--------GVTFLDLKPSSFKLLQS 365 (874)
Q Consensus 294 ~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~--------gIIHRDLKPsNILL~~~ 365 (874)
.|.-.+|+.+|.+.|||.+||.+. .++....+.+++.++.||++||-. .|.|||||..|||+..+
T Consensus 280 -----s~TQLwLvTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn 352 (513)
T KOG2052|consen 280 -----SWTQLWLVTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 352 (513)
T ss_pred -----ceEEEEEeeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccC
Confidence 123357899999999999999986 699999999999999999999953 49999999999999999
Q ss_pred CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccc
Q 002843 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (874)
Q Consensus 366 ~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~ 445 (874)
+.+-|+|+|||-.-..+. + .
T Consensus 353 ~~C~IADLGLAv~h~~~t----------------------------------------------------------~--~ 372 (513)
T KOG2052|consen 353 GTCCIADLGLAVRHDSDT----------------------------------------------------------D--T 372 (513)
T ss_pred CcEEEeeceeeEEecccC----------------------------------------------------------C--c
Confidence 999999999985322000 0 0
Q ss_pred cccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCC----C--CCccchhHHH
Q 002843 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV----C--TTSSNIYSLG 519 (874)
Q Consensus 446 l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~----y--s~kSDIwSLG 519 (874)
+ | ...+..+||..|||||++.... + -..+||||||
T Consensus 373 i----------------------d-----------------i~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafg 413 (513)
T KOG2052|consen 373 I----------------------D-----------------IPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFG 413 (513)
T ss_pred c----------------------c-----------------CCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHH
Confidence 0 0 0015779999999999998632 2 1469999999
Q ss_pred HHHHHhcCC----------CCch------HHHHHHHHH-hhcCCCCCCCCCCC---H---HHHHHHHHccccCCCCCCCh
Q 002843 520 VLFFELFGR----------FDSE------RALAAAMSD-LRDRILPPSFLSEN---P---KEAGFCLWQLHPEPLSRPTT 576 (874)
Q Consensus 520 VIL~ELltG----------~~p~------~~~~~~~~~-l~~~~lpp~~~~~~---p---~l~dLi~~cL~~dP~~RPTa 576 (874)
.|+||++.. ..|| ++..+.|.+ +.-+.+.|.++..+ + .+..+|+.||+.+|.-|.||
T Consensus 414 LVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA 493 (513)
T KOG2052|consen 414 LVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA 493 (513)
T ss_pred HHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH
Confidence 999999853 2343 222222333 22233333333322 2 36799999999999999998
Q ss_pred hHH
Q 002843 577 REI 579 (874)
Q Consensus 577 ~Ei 579 (874)
--|
T Consensus 494 Lri 496 (513)
T KOG2052|consen 494 LRI 496 (513)
T ss_pred HHH
Confidence 554
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-22 Score=215.36 Aligned_cols=243 Identities=15% Similarity=0.146 Sum_probs=186.0
Q ss_pred ceEEEecCCCC--cccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCcccc
Q 002843 223 KGIVCRGPPLN--AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (874)
Q Consensus 223 kGvv~kg~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (874)
+|-||+|-..| .++. -++...|..+.-..++.-.+...+.+++....||+...|...++.++-.++
T Consensus 297 FGri~~gI~~eEdt~n~-~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~----------- 364 (563)
T KOG1024|consen 297 FGRIYRGIWREEDTYND-CQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPF----------- 364 (563)
T ss_pred hhheeeeeecccCCcch-HHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcce-----------
Confidence 47899994321 1221 122233344444556677788889999999999999999888887776553
Q ss_pred CCCceEeeccCCCCHHHHHHh-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEecc
Q 002843 301 IGGLRQGSSDHGVNLREWLNA-------RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGP 373 (874)
Q Consensus 301 ~~~~lvMEy~~GgsL~~~L~~-------~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDF 373 (874)
+.+.++.-|+|..||.. ..+.++..+...++.||+.|++|||++||||.||...|.+|++.-++||+|.
T Consensus 365 ----V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDs 440 (563)
T KOG1024|consen 365 ----VLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDS 440 (563)
T ss_pred ----EEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccc
Confidence 46788888999999972 2236888899999999999999999999999999999999999999999999
Q ss_pred ccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCC
Q 002843 374 IIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPH 453 (874)
Q Consensus 374 Glar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 453 (874)
.++|++. .+|..|.. ++
T Consensus 441 aLSRDLF---------------------P~DYhcLG---------Dn--------------------------------- 457 (563)
T KOG1024|consen 441 ALSRDLF---------------------PGDYHCLG---------DN--------------------------------- 457 (563)
T ss_pred hhccccC---------------------cccccccC---------CC---------------------------------
Confidence 9999876 11111111 00
Q ss_pred CCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCch
Q 002843 454 SHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSE 532 (874)
Q Consensus 454 ~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~ 532 (874)
+ --...|||||.+....|+.++|+|||||+||||+| |..|+
T Consensus 458 -E-------------------------------------nRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Py 499 (563)
T KOG1024|consen 458 -E-------------------------------------NRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPY 499 (563)
T ss_pred -C-------------------------------------CCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCc
Confidence 0 00137999999999999999999999999999998 77776
Q ss_pred HHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 533 RALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 533 ~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.+.. ++...++++..-.+..+...++..+|..||...|++||+++|+...
T Consensus 500 aeIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~c 551 (563)
T KOG1024|consen 500 AEIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVIC 551 (563)
T ss_pred cccCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHH
Confidence 4322 2344567777666666777889999999999999999999998754
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-22 Score=200.66 Aligned_cols=136 Identities=18% Similarity=0.174 Sum_probs=111.2
Q ss_pred ceEeeccCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCceEEecCCcEEEeccccchhc
Q 002843 304 LRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I~~QIl~aL~yLHs~-gIIHRDLKPsNILL~~~~~vKLiDFGlar~~ 379 (874)
++-||.|. .||..|-++ .+..++|...=.|+..++.||.|||++ .|||||+||+||||+..|++|+||||++-.+
T Consensus 121 wIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L 199 (282)
T KOG0984|consen 121 WICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYL 199 (282)
T ss_pred EEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceee
Confidence 45799997 799887653 455899999999999999999999987 8999999999999999999999999998755
Q ss_pred cccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCc
Q 002843 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (874)
Q Consensus 380 ~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~ 459 (874)
.++..
T Consensus 200 ~dSiA--------------------------------------------------------------------------- 204 (282)
T KOG0984|consen 200 VDSIA--------------------------------------------------------------------------- 204 (282)
T ss_pred hhhhH---------------------------------------------------------------------------
Confidence 52211
Q ss_pred ccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC----CCCCCccchhHHHHHHHHhcCCCCchHHH
Q 002843 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG----GVCTTSSNIYSLGVLFFELFGRFDSERAL 535 (874)
Q Consensus 460 ~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g----~~ys~kSDIwSLGVIL~ELltG~~p~~~~ 535 (874)
-+...|...|||||.+.. ..|+-+|||||||+.++||.+++.|+..+
T Consensus 205 -----------------------------kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 205 -----------------------------KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred -----------------------------HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 023456679999999875 35999999999999999999998887655
Q ss_pred HHHHHHhhc
Q 002843 536 AAAMSDLRD 544 (874)
Q Consensus 536 ~~~~~~l~~ 544 (874)
..-+..|++
T Consensus 256 ~tpF~qLkq 264 (282)
T KOG0984|consen 256 GTPFQQLKQ 264 (282)
T ss_pred CCHHHHHHH
Confidence 544444444
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=226.92 Aligned_cols=238 Identities=16% Similarity=0.080 Sum_probs=178.0
Q ss_pred CceEEEecCCCCccccccccc----ccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCc
Q 002843 222 GKGIVCRGPPLNAFKERRGMI----DTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (874)
..|.||||.+ +++ ++.. ..|......++........++..+.+..||+.+.++........
T Consensus 708 AfGtV~kGiw---~Pe-ge~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~----------- 772 (1177)
T KOG1025|consen 708 AFGTVYKGIW---IPE-GENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTL----------- 772 (1177)
T ss_pred cceeEEeeeE---ecC-CceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchH-----------
Confidence 4588999974 454 2222 22223334556666777888888999999999988887554331
Q ss_pred cccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccch
Q 002843 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 298 ~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
-|+.+|+++|+|.+|++.+...+-..+.+.|.+||++|+.|||.+++|||||-..|||+...+++|+.|||+++
T Consensus 773 ------qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ 846 (1177)
T KOG1025|consen 773 ------QLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAK 846 (1177)
T ss_pred ------HHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhh
Confidence 35899999999999998876689999999999999999999999999999999999999999999999999998
Q ss_pred hccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCC
Q 002843 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (874)
Q Consensus 378 ~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~ 457 (874)
.+.-+.. .++
T Consensus 847 ll~~d~~------------------------------------------------------------ey~---------- 856 (1177)
T KOG1025|consen 847 LLAPDEK------------------------------------------------------------EYS---------- 856 (1177)
T ss_pred ccCcccc------------------------------------------------------------ccc----------
Confidence 5441100 000
Q ss_pred CcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHHH
Q 002843 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERALA 536 (874)
Q Consensus 458 ~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~~ 536 (874)
.. ...-.+.|||=|.+...+|+.++|||||||++|||+| |..|+....
T Consensus 857 ----------~~---------------------~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~ 905 (1177)
T KOG1025|consen 857 ----------AP---------------------GGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP 905 (1177)
T ss_pred ----------cc---------------------ccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC
Confidence 00 0011246899999999999999999999999999998 777764322
Q ss_pred -HHHHH-hhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 537 -AAMSD-LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 537 -~~~~~-l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
..+.+ ++.+..-++.....-++.-++.+||..|+..||+++++-.
T Consensus 906 ~~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 906 AEEIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HHHhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 12222 3333333344444567889999999999999999988743
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.9e-22 Score=216.09 Aligned_cols=226 Identities=17% Similarity=0.142 Sum_probs=142.4
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC-CcEEEeccccchhccc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-NQVKYIGPIIQKETLE 381 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~-~~vKLiDFGlar~~~~ 381 (874)
.+++|||++..+.++++.. ++..++..+++.++.||.++|.+|||||||||+|||++.. +.-.|+|||+|.....
T Consensus 110 v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred eEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHh
Confidence 4679999999999999864 7799999999999999999999999999999999999854 7789999999974221
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
... .++...-+.+ ......|.....-. ..++
T Consensus 186 ~~~-----~~~s~~~~~~-----------------------------~~~~~~g~~~~~~~-----~~~~---------- 216 (418)
T KOG1167|consen 186 YQQ-----TEHSRSYSGR-----------------------------HATPAMGKDVHCQS-----VATA---------- 216 (418)
T ss_pred hhh-----hhhhhhhhcc-----------------------------cCCccccCcccccc-----cccc----------
Confidence 100 0000000000 00000000000000 0000
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchH----HHH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSER----ALA 536 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~----~~~ 536 (874)
.+-.+|-. .|+.... .......||++|+|||++..-+ .++++||||.|||+.-++++..||- +..
T Consensus 217 ---~~p~g~~~-----~~~~~r~--~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~ 286 (418)
T KOG1167|consen 217 ---SKPAGYYR-----RCNDGRP--SERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDAD 286 (418)
T ss_pred ---cCCCCcee-----ccCCCcc--ceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccc
Confidence 00000000 0111111 1124678999999999998754 6899999999999999999987761 000
Q ss_pred H-----------HHH---HhhcC--C------------------C------C--------CCCCCCCH-HHHHHHHHccc
Q 002843 537 A-----------AMS---DLRDR--I------------------L------P--------PSFLSENP-KEAGFCLWQLH 567 (874)
Q Consensus 537 ~-----------~~~---~l~~~--~------------------l------p--------p~~~~~~p-~l~dLi~~cL~ 567 (874)
. .|. .+... . + + ..+....+ .+.+|+.+||+
T Consensus 287 al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le 366 (418)
T KOG1167|consen 287 ALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLE 366 (418)
T ss_pred hHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHcc
Confidence 0 000 00001 0 0 0 00111122 57899999999
Q ss_pred cCCCCCCChhHHhhhHHHHhhHhh
Q 002843 568 PEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
.||.+|.||+++|.||||++..+.
T Consensus 367 ~np~kRitAEeALkHpFF~~~~~~ 390 (418)
T KOG1167|consen 367 LNPQKRITAEDALKHPFFDEADRT 390 (418)
T ss_pred CChhhcccHHHHhcCcCCcchhhh
Confidence 999999999999999999965544
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.4e-21 Score=190.86 Aligned_cols=177 Identities=25% Similarity=0.294 Sum_probs=141.3
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....++.+..+......+. ..+++|||+.|++|.+++......+++..++.++.+
T Consensus 37 ~~~~e~~~~~~l~~~~i~~~~~~~~~~~----------------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 100 (215)
T cd00180 37 ELLREIEILKKLNHPNIVKLYGVFEDEN----------------HLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQ 100 (215)
T ss_pred HHHHHHHHHHhcCCCCeeeEeeeeecCC----------------eEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHH
Confidence 3444445566666666666655544221 235799999999999999876346999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEec-CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~-~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
++.+|++||+.|++|+||+|.||+++. .+.++|+|||.+........
T Consensus 101 l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-------------------------------- 148 (215)
T cd00180 101 ILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-------------------------------- 148 (215)
T ss_pred HHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--------------------------------
Confidence 999999999999999999999999999 89999999998763320000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
......+..
T Consensus 149 -----------------------------------------------------------------------~~~~~~~~~ 157 (215)
T cd00180 149 -----------------------------------------------------------------------LLKTIVGTP 157 (215)
T ss_pred -----------------------------------------------------------------------hhhcccCCC
Confidence 001234567
Q ss_pred cccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 497 WYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 497 ~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
.|++||.+... .++.++|+|+||+++++| ..+.+++.+||..+|++||+
T Consensus 158 ~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------~~~~~~l~~~l~~~p~~R~~ 207 (215)
T cd00180 158 AYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------PELKDLIRKMLQKDPEKRPS 207 (215)
T ss_pred CccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------HHHHHHHHHHhhCCcccCcC
Confidence 89999999887 788999999999999999 56789999999999999999
Q ss_pred hhHHhhhH
Q 002843 576 TREILQSE 583 (874)
Q Consensus 576 a~EiL~hp 583 (874)
+.+++.++
T Consensus 208 ~~~l~~~~ 215 (215)
T cd00180 208 AKEILEHL 215 (215)
T ss_pred HHHHhhCC
Confidence 99998764
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-22 Score=228.03 Aligned_cols=245 Identities=18% Similarity=0.178 Sum_probs=177.8
Q ss_pred eEEEecCCCCcccc---cccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCcccc
Q 002843 224 GIVCRGPPLNAFKE---RRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (874)
Q Consensus 224 Gvv~kg~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (874)
-+|+-|.|||+++. ...+-.+.++|+-.-..|....--+..+++...||+++..+..-.. .
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr----------------~ 84 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR----------------R 84 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhh----------------h
Confidence 35666777777774 2233344444443323333333334456677777777766655332 2
Q ss_pred CCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 301 ~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
.++++.||||.||+|.+.-.-.+ .+++.++.+.++..+.||+|||++|=+|||||-.|||++..|.+|++|||.+.++.
T Consensus 85 dklwicMEycgggslQdiy~~Tg-plselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqit 163 (829)
T KOG0576|consen 85 DKLWICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT 163 (829)
T ss_pred cCcEEEEEecCCCcccceeeecc-cchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhh
Confidence 33567899999999999776666 89999999999999999999999999999999999999999999999999876544
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
.. ..
T Consensus 164 at----------------------------------------------------------i~------------------ 167 (829)
T KOG0576|consen 164 AT----------------------------------------------------------IA------------------ 167 (829)
T ss_pred hh----------------------------------------------------------hh------------------
Confidence 10 00
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCccccc---CCCCCCccchhHHHHHHHHhcCCCCchHHHHH
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS---GGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~---g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~ 537 (874)
.....+||++|||||+.. .+.|...+|||++|+...||---.+|....-.
T Consensus 168 ---------------------------KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp 220 (829)
T KOG0576|consen 168 ---------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP 220 (829)
T ss_pred ---------------------------hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch
Confidence 002568999999999865 35699999999999999999887777533222
Q ss_pred H---HHHhhcCCCCCCCCCC---CHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 538 A---MSDLRDRILPPSFLSE---NPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 538 ~---~~~l~~~~lpp~~~~~---~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
. +-.-....-||..... ++-+.+|++.+|..+|++||+++.+|+|||+..-
T Consensus 221 mr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 221 MRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred HHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 1 1111224445544332 3668899999999999999999999999998753
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-21 Score=230.65 Aligned_cols=184 Identities=18% Similarity=0.186 Sum_probs=142.3
Q ss_pred EeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccC
Q 002843 306 QGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASL 385 (874)
Q Consensus 306 vMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~ 385 (874)
.||||++ +|..++...+ .++..++..+|+||+.||+|+|++||.||||||+|+++..+|.+|++|||.+....-+
T Consensus 399 ~mE~~~~-Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~--- 473 (601)
T KOG0590|consen 399 SMEYCPY-DLFSLVMSNG-KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP--- 473 (601)
T ss_pred hhhcccH-HHHHHHhccc-ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccC---
Confidence 4999999 9999999875 7999999999999999999999999999999999999999999999999987522200
Q ss_pred CCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccccccc
Q 002843 386 DIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNA 465 (874)
Q Consensus 386 ~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~ 465 (874)
T Consensus 474 -------------------------------------------------------------------------------- 473 (601)
T KOG0590|consen 474 -------------------------------------------------------------------------------- 473 (601)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCC-CccchhHHHHHHHHhcCCCCchHHHHHHHH---H
Q 002843 466 GFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCT-TSSNIYSLGVLFFELFGRFDSERALAAAMS---D 541 (874)
Q Consensus 466 ~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys-~kSDIwSLGVIL~ELltG~~p~~~~~~~~~---~ 541 (874)
...........+|+..|+|||++.+..|. ...||||.|++++.|++|+.||........ .
T Consensus 474 ----------------~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~ 537 (601)
T KOG0590|consen 474 ----------------WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT 537 (601)
T ss_pred ----------------cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh
Confidence 00000111467899999999999999886 589999999999999999888843221100 1
Q ss_pred hh---cCCC---CCCCCCC-CHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 542 LR---DRIL---PPSFLSE-NPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 542 l~---~~~l---pp~~~~~-~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.. +... +...... ...-..+|.+||++||.+|.|+.+|++.+||+.+..
T Consensus 538 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~ 593 (601)
T KOG0590|consen 538 NNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIEC 593 (601)
T ss_pred hccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcce
Confidence 11 1111 1111111 123568999999999999999999999999998753
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-19 Score=203.40 Aligned_cols=152 Identities=18% Similarity=0.229 Sum_probs=130.3
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeecc-CCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSD-HGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~-~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
.++.-..+....|+||+++++-...+++.++ .||-. +|.+|++||.... .++|.++..||+|
T Consensus 616 EIqIla~l~~~sH~NIlKlLdfFEddd~yyl----------------~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQ 678 (772)
T KOG1152|consen 616 EIQILATLNKHSHENILKLLDFFEDDDYYYL----------------ETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQ 678 (772)
T ss_pred hHHHHHHhhhcCccchhhhhheeecCCeeEE----------------EecCCCCCcchhhhhhccC-ccchHHHHHHHHH
Confidence 4555567788889999999999998887664 67754 6899999998765 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.|+++||++||||||||-+|+.++.+|.+||+|||.+.... -
T Consensus 679 V~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~k---------------------s--------------- 722 (772)
T KOG1152|consen 679 VVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTK---------------------S--------------- 722 (772)
T ss_pred HHhccccccccCceecccccccEEEecCCeEEEeeccchhhhc---------------------C---------------
Confidence 9999999999999999999999999999999999999875322 0
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
-.+...+||..
T Consensus 723 ---------------------------------------------------------------------gpfd~f~gtv~ 733 (772)
T KOG1152|consen 723 ---------------------------------------------------------------------GPFDVFVGTVD 733 (772)
T ss_pred ---------------------------------------------------------------------CCcceeeeecc
Confidence 01136689999
Q ss_pred ccCcccccCCCC-CCccchhHHHHHHHHhcCCCCch
Q 002843 498 YASPEELSGGVC-TTSSNIYSLGVLFFELFGRFDSE 532 (874)
Q Consensus 498 Y~APEvl~g~~y-s~kSDIwSLGVIL~ELltG~~p~ 532 (874)
|.|||++.|.+| +..-|||+||++||.++....|+
T Consensus 734 ~aapevl~g~~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 734 YAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred ccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence 999999999987 78899999999999999877665
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.7e-19 Score=185.23 Aligned_cols=162 Identities=17% Similarity=0.191 Sum_probs=128.5
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC--CcEEEeccccchhccc
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS--NQVKYIGPIIQKETLE 381 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~--~~vKLiDFGlar~~~~ 381 (874)
..+||||+-|+|++-+...| +.+.-...++.|+++|+.|||++++||||||.+||||-.. .++||||||+.+..+.
T Consensus 98 vF~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred EEeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 35899999999999998875 9999999999999999999999999999999999999643 5799999999875430
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
. +
T Consensus 176 t----------------------------------------------------------V-------------------- 177 (378)
T KOG1345|consen 176 T----------------------------------------------------------V-------------------- 177 (378)
T ss_pred e----------------------------------------------------------e--------------------
Confidence 0 0
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC---C--CCCccchhHHHHHHHHhcCCCCchHHHH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG---V--CTTSSNIYSLGVLFFELFGRFDSERALA 536 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~---~--ys~kSDIwSLGVIL~ELltG~~p~~~~~ 536 (874)
...-.+-.|.+||++... . ..+.+|||.||+|+|.++||..|+....
T Consensus 178 ----------------------------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~ 229 (378)
T KOG1345|consen 178 ----------------------------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS 229 (378)
T ss_pred ----------------------------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh
Confidence 011123468899877642 2 5789999999999999999999985221
Q ss_pred -------HHHHHh--hcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 537 -------AAMSDL--RDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 537 -------~~~~~l--~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
..+.-+ ....+|..|...++++..+.++-|.++|++|
T Consensus 230 ~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 230 IMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred ccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 112212 1245677888888999999999999999999
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.7e-18 Score=174.65 Aligned_cols=155 Identities=21% Similarity=0.258 Sum_probs=121.5
Q ss_pred HHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHH
Q 002843 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (874)
Q Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~a 341 (874)
+...+....+++++.+......+. ..+++|||+++++|.+++......+++..+..++.|++.+
T Consensus 47 e~~~~~~~~~~~i~~~~~~~~~~~----------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~ 110 (225)
T smart00221 47 EIRILKKLKHPNIVKLYGVFEDPE----------------PLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEA 110 (225)
T ss_pred HHHHHHhCCCCChhhheeeeecCC----------------ceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 334455556777666655543221 2357999999999999998765228999999999999999
Q ss_pred HHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccc
Q 002843 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (874)
Q Consensus 342 L~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~ 421 (874)
|.|||+++++|+||+|.||+++.++.++|+|||++........
T Consensus 111 l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~------------------------------------- 153 (225)
T smart00221 111 LEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA------------------------------------- 153 (225)
T ss_pred HHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-------------------------------------
Confidence 9999999999999999999999999999999998764330000
Q ss_pred ccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCc
Q 002843 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (874)
Q Consensus 422 ~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~AP 501 (874)
.......++..|++|
T Consensus 154 -----------------------------------------------------------------~~~~~~~~~~~~~~p 168 (225)
T smart00221 154 -----------------------------------------------------------------ALLKTVKGTPFYLAP 168 (225)
T ss_pred -----------------------------------------------------------------ccccceeccCCcCCH
Confidence 000233566789999
Q ss_pred ccc-cCCCCCCccchhHHHHHHHHhcCCCCchHH
Q 002843 502 EEL-SGGVCTTSSNIYSLGVLFFELFGRFDSERA 534 (874)
Q Consensus 502 Evl-~g~~ys~kSDIwSLGVIL~ELltG~~p~~~ 534 (874)
|.+ ....++.++|||+||++++||++|..||..
T Consensus 169 e~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 169 EVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred hHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 998 556688899999999999999999999954
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.1e-17 Score=172.14 Aligned_cols=219 Identities=22% Similarity=0.272 Sum_probs=160.8
Q ss_pred HHHHHHhHHhhcCCC-CCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--CCCCHHHHHHH
Q 002843 258 LKAAGAMMVASNASP-KPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--HKGKRIECLYI 334 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~--~~lse~e~~~I 334 (874)
....+..++....++ +++.+.......+. ..++|+|+.|++|.+++.... ..++...+..+
T Consensus 43 ~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 106 (384)
T COG0515 43 RFLREIQILASLNHPPNIVKLYDFFQDEGS----------------LYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFI 106 (384)
T ss_pred HHHHHHHHHHHccCCcceeeEEEEEecCCE----------------EEEEEecCCCCcHHHHHHhcccccCCCHHHHHHH
Confidence 344455567777777 47777666532222 246999999999998887764 26999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCC-cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~-~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
+.|++.+|.|+|+.+++||||||+||+++..+ .++++|||+++.......
T Consensus 107 ~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~----------------------------- 157 (384)
T COG0515 107 LAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS----------------------------- 157 (384)
T ss_pred HHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc-----------------------------
Confidence 99999999999999999999999999999988 799999999863320000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
..+ . ........
T Consensus 158 ------------------------------------------------------------~~~-----~---~~~~~~~~ 169 (384)
T COG0515 158 ------------------------------------------------------------TSS-----I---PALPSTSV 169 (384)
T ss_pred ------------------------------------------------------------ccc-----c---cccccccc
Confidence 000 0 00114668
Q ss_pred ccccccCcccccC---CCCCCccchhHHHHHHHHhcCCCCchHHHH------HHHHHhhcCCCC---CCCCCCC-----H
Q 002843 494 EEKWYASPEELSG---GVCTTSSNIYSLGVLFFELFGRFDSERALA------AAMSDLRDRILP---PSFLSEN-----P 556 (874)
Q Consensus 494 GT~~Y~APEvl~g---~~ys~kSDIwSLGVIL~ELltG~~p~~~~~------~~~~~l~~~~lp---p~~~~~~-----p 556 (874)
||.+|+|||.+.+ ..++...|+||+|++++++++|..|+.... .....+.....+ ....... .
T Consensus 170 ~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (384)
T COG0515 170 GTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISK 249 (384)
T ss_pred cccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhH
Confidence 9999999999998 578899999999999999999988864332 233333333322 1222211 3
Q ss_pred HHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 557 KEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 557 ~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
...+++..|+..+|..|.++.+...+++.....
T Consensus 250 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 282 (384)
T COG0515 250 AASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLK 282 (384)
T ss_pred HHHHHHHHHHhcCchhcCCHHHHhhchHhhCcc
Confidence 578999999999999999999988886665433
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-16 Score=183.57 Aligned_cols=200 Identities=19% Similarity=0.189 Sum_probs=161.7
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
.+.....+|.++........++..++ +++|..||+|...+.+.. .+.+.....+...++-+++
T Consensus 49 il~~~~~~~f~v~lhyafqt~~kl~l----------------~ld~~rgg~lft~l~~~~-~f~~~~~~~~~aelaLald 111 (612)
T KOG0603|consen 49 ILAFVHNTPFLVKLHYAFQTDGKLYL----------------ILDFLRGGDLFTRLSKEV-MFDELDVAFYLAELALALD 111 (612)
T ss_pred HHhhccCCCceeeeeeeeccccchhH----------------hhhhcccchhhhccccCC-chHHHHHHHHHHHHHHHHh
Confidence 34445668888888888777776665 799999999999998776 6889999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
++|+.+|+|||+|++||+++.+|++++.|||+++...+.
T Consensus 112 ~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~----------------------------------------- 150 (612)
T KOG0603|consen 112 HLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE----------------------------------------- 150 (612)
T ss_pred hcchhHHHHhcccccceeecccCccccCCchhhhHhHhh-----------------------------------------
Confidence 999999999999999999999999999999998854300
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
...+||..|||||+
T Consensus 151 ------------------------------------------------------------------~~~cgt~eymApEI 164 (612)
T KOG0603|consen 151 ------------------------------------------------------------------KIACGTYEYRAPEI 164 (612)
T ss_pred ------------------------------------------------------------------hhcccchhhhhhHh
Confidence 12288999999999
Q ss_pred ccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCCCC-----hh
Q 002843 504 LSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TR 577 (874)
Q Consensus 504 l~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT-----a~ 577 (874)
+. ....++|.||||+++|||++|..||.. ..+..|.. ...-|.. .++.+.+++..++..+|.+|.- +.
T Consensus 165 ~~--gh~~a~D~ws~gvl~felltg~~pf~~--~~~~~Il~~~~~~p~~--l~~~a~~~~~~l~~r~p~nrLg~~~~~~~ 238 (612)
T KOG0603|consen 165 IN--GHLSAADWWSFGVLAFELLTGTLPFGG--DTMKRILKAELEMPRE--LSAEARSLFRQLFKRNPENRLGAGPDGVD 238 (612)
T ss_pred hh--ccCCcccchhhhhhHHHHhhCCCCCch--HHHHHHhhhccCCchh--hhHHHHHHHHHHHhhCHHHHhccCcchhH
Confidence 98 567899999999999999999999877 22333322 2222222 2455778999999999999964 47
Q ss_pred HHhhhHHHHhhHhhhh
Q 002843 578 EILQSEVTNEFQEVCA 593 (874)
Q Consensus 578 EiL~hp~~~~~~~~~~ 593 (874)
|+++|+||..+.+...
T Consensus 239 eik~h~f~~~i~~~~l 254 (612)
T KOG0603|consen 239 EIKQHEFFQSIDWNEL 254 (612)
T ss_pred HHhccchheeeeHhhH
Confidence 9999999998887743
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.4e-16 Score=187.02 Aligned_cols=194 Identities=18% Similarity=0.161 Sum_probs=136.5
Q ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchh
Q 002843 313 VNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSEN 392 (874)
Q Consensus 313 gsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~ 392 (874)
||-...++.-+ +++... +.+++|||+-||+|||+||+|.+|+.-|++|+.|||+.+.....-
T Consensus 136 gDc~tllk~~g-~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~--------- 197 (1205)
T KOG0606|consen 136 GDCATLLKNIG-PLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL--------- 197 (1205)
T ss_pred chhhhhcccCC-CCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhc---------
Confidence 55566666654 455443 789999999999999999999999999999999999988544110
Q ss_pred hhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCC
Q 002843 393 YRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSK 472 (874)
Q Consensus 393 ~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~ 472 (874)
.. .++ .+.+...+ | ++ +
T Consensus 198 ---------------at--nl~------------------eg~I~k~t------~------------Ef---------~- 214 (1205)
T KOG0606|consen 198 ---------------AT--NLK------------------EGHIEKDT------H------------EF---------Q- 214 (1205)
T ss_pred ---------------cc--hhh------------------hcchHHHH------H------------Hh---------h-
Confidence 00 000 00000000 0 00 0
Q ss_pred CCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHH-hhcCC-CC
Q 002843 473 SSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSD-LRDRI-LP 548 (874)
Q Consensus 473 s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~-l~~~~-lp 548 (874)
--..+|||.|+|||++....|+..+|.|++|+|+||.+-|+.||... .+.+.. +...+ +|
T Consensus 215 ----------------dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wp 278 (1205)
T KOG0606|consen 215 ----------------DKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP 278 (1205)
T ss_pred ----------------hccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccc
Confidence 02568999999999999999999999999999999999999888543 223333 33333 34
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCC---CChhHHhhhHHHHhhHhhhh-hhhhcccccc
Q 002843 549 PSFLSENPKEAGFCLWQLHPEPLSR---PTTREILQSEVTNEFQEVCA-EELLSSIDQD 603 (874)
Q Consensus 549 p~~~~~~p~l~dLi~~cL~~dP~~R---PTa~EiL~hp~~~~~~~~~~-~e~~~~ieqe 603 (874)
+.-....++++++|..+|+.+|..| +.+-++.+|+||..+.+... +.....+.+.
T Consensus 279 E~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~~llRqkaefvpql 337 (1205)
T KOG0606|consen 279 EEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWKSLLRQKAEFVPQL 337 (1205)
T ss_pred ccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccchhhhhhccccccc
Confidence 4444445789999999999999999 56788999999999887743 3333333333
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.1e-16 Score=185.40 Aligned_cols=181 Identities=21% Similarity=0.155 Sum_probs=130.7
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcccc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLES 382 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~ 382 (874)
++++=+|+. -+|.+.|..+. .+...|.+.|+.||+.||.-+|..||+|+|||.+||||++-+.+-|+||..-|...
T Consensus 96 AylvRqyvk-hnLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtY-- 171 (1431)
T KOG1240|consen 96 AYLVRQYVK-HNLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTY-- 171 (1431)
T ss_pred HHHHHHHHh-hhhhhhhccch-HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCcc--
Confidence 455677887 59999998765 78999999999999999999999999999999999999999999999998765433
Q ss_pred ccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccc
Q 002843 383 ASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHH 462 (874)
Q Consensus 383 ~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~ 462 (874)
++-||+ +||++.-
T Consensus 172 -----LPeDNP---------adf~fFF----------------------------------------------------- 184 (1431)
T KOG1240|consen 172 -----LPEDNP---------ADFTFFF----------------------------------------------------- 184 (1431)
T ss_pred -----CCCCCc---------ccceEEE-----------------------------------------------------
Confidence 111111 1111110
Q ss_pred cccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC----------C-CCCccchhHHHHHHHHhcC-CCC
Q 002843 463 TNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG----------V-CTTSSNIYSLGVLFFELFG-RFD 530 (874)
Q Consensus 463 ~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~----------~-ys~kSDIwSLGVIL~ELlt-G~~ 530 (874)
-.++ . -..|.|||.+... + .+++.||||+||+++||++ |.+
T Consensus 185 --------DTSr------------------R-RtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~P 237 (1431)
T KOG1240|consen 185 --------DTSR------------------R-RTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRP 237 (1431)
T ss_pred --------ecCC------------------c-eeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCC
Confidence 0000 0 1279999988652 2 5789999999999999998 688
Q ss_pred chHHHHHHHHHhhc-CCCCCCCC--CCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 531 SERALAAAMSDLRD-RILPPSFL--SENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 531 p~~~~~~~~~~l~~-~~lpp~~~--~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+|.-.. .+..-+. ...+...+ -+.+.+..+++.|++.||++|.+|++.|+-
T Consensus 238 lF~LSQ-L~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 238 LFTLSQ-LLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred cccHHH-HHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 886322 2222222 12222211 123468899999999999999999999976
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-14 Score=156.65 Aligned_cols=182 Identities=18% Similarity=0.150 Sum_probs=134.1
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC----CcEEEeccccchh
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS----NQVKYIGPIIQKE 378 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~----~~vKLiDFGlar~ 378 (874)
.+|+|--.. -+|++||-.+. .+.....-|+.|+++|+.|||.+||.|||||.+|||+.-+ -.+.++|||.+-.
T Consensus 318 lylvMkrY~-~tLr~yl~~~~--~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLA 394 (598)
T KOG4158|consen 318 LYLVMKRYR-QTLREYLWTRH--RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLA 394 (598)
T ss_pred EEEehhcch-hhHHHHHhcCC--CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeee
Confidence 568998887 69999998874 8889999999999999999999999999999999999533 3478899986531
Q ss_pred ccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCC
Q 002843 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (874)
Q Consensus 379 ~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~ 458 (874)
-. .+|.+..-.+
T Consensus 395 d~----------------------------------------------------~hGlqlpy~S---------------- 406 (598)
T KOG4158|consen 395 DD----------------------------------------------------NHGLQLPYES---------------- 406 (598)
T ss_pred cc----------------------------------------------------cccccccccc----------------
Confidence 00 0011111000
Q ss_pred cccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCC-----C-CCccchhHHHHHHHHhcCCCCch
Q 002843 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-----C-TTSSNIYSLGVLFFELFGRFDSE 532 (874)
Q Consensus 459 ~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~-----y-s~kSDIwSLGVIL~ELltG~~p~ 532 (874)
. ....-|....||||+....+ . -.++|.|+.|.+.||+++...||
T Consensus 407 ---------------------~--------~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPF 457 (598)
T KOG4158|consen 407 ---------------------D--------EVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPF 457 (598)
T ss_pred ---------------------c--------cccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcc
Confidence 0 02334566789999987532 1 25899999999999999999998
Q ss_pred HHHHHH---HHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh---hHHhhhHH
Q 002843 533 RALAAA---MSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT---REILQSEV 584 (874)
Q Consensus 533 ~~~~~~---~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa---~EiL~hp~ 584 (874)
.....+ ....++..+|+-.....|.+.+++..+|++||++|++. +-+|+--+
T Consensus 458 Y~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~LsL 515 (598)
T KOG4158|consen 458 YKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNLSL 515 (598)
T ss_pred cccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHHHHH
Confidence 653322 22345566777777778899999999999999999885 44554433
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.2e-13 Score=153.29 Aligned_cols=185 Identities=17% Similarity=0.091 Sum_probs=131.6
Q ss_pred ceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC-----CcEEEeccccch
Q 002843 304 LRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-----NQVKYIGPIIQK 377 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~-----~~vKLiDFGlar 377 (874)
++||+.+ |.+|.++.+... +.++...++.|+.|++.+|.+||+.|+|||||||+|+++... ..+.++|||+++
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred EEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 5689988 699999886544 689999999999999999999999999999999999999865 359999999998
Q ss_pred hccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCC
Q 002843 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (874)
Q Consensus 378 ~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~ 457 (874)
....... . +.. +
T Consensus 176 ~~~~~~~--------------------~-----------------------------~~~---------------~---- 187 (322)
T KOG1164|consen 176 RFKYVGD--------------------S-----------------------------GGN---------------L---- 187 (322)
T ss_pred cccccCC--------------------C-----------------------------Ccc---------------c----
Confidence 3220000 0 000 0
Q ss_pred CcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH
Q 002843 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537 (874)
Q Consensus 458 ~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~ 537 (874)
+.| ...-....||..|+++.+..+...+.+.|+||++.++.||+.|..|+.....
T Consensus 188 ----------------~~~---------r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~ 242 (322)
T KOG1164|consen 188 ----------------RPP---------RPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEM 242 (322)
T ss_pred ----------------ccC---------CCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence 000 0000244699999999999998899999999999999999999888743221
Q ss_pred -----HHHHhhcCCCCCCCCCCC-HHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 538 -----AMSDLRDRILPPSFLSEN-PKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 538 -----~~~~l~~~~lpp~~~~~~-p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.+...........+.... ..+..+...+-..+...+|....+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 243 TDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred cchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 122222222222122223 446666766667889999988776554
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.9e-14 Score=161.72 Aligned_cols=96 Identities=19% Similarity=0.080 Sum_probs=73.5
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....|++++..+.. .+. .+++||||+|++|.. +.. .. ...++.|
T Consensus 67 ~~~~E~~iL~~L~h~~iv~~l~~---~~~----------------~~LVmE~~~G~~L~~-~~~----~~---~~~~~~~ 119 (365)
T PRK09188 67 LAAREIRALKTVRGIGVVPQLLA---TGK----------------DGLVRGWTEGVPLHL-ARP----HG---DPAWFRS 119 (365)
T ss_pred HHHHHHHHHHhccCCCCCcEEEE---cCC----------------cEEEEEccCCCCHHH-hCc----cc---hHHHHHH
Confidence 35566677888888877632211 111 257999999999973 211 11 1578999
Q ss_pred HHHHHHHHHHCCCcccCC-CCCceEEecCCcEEEeccccchhcc
Q 002843 338 IVALVDYHHTQGVTFLDL-KPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDL-KPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
++.||.|||++||+|||| ||+|||++.++.+||+|||+++.+.
T Consensus 120 i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~ 163 (365)
T PRK09188 120 AHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFR 163 (365)
T ss_pred HHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecc
Confidence 999999999999999999 9999999989999999999998544
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.9e-14 Score=153.57 Aligned_cols=116 Identities=16% Similarity=0.278 Sum_probs=95.8
Q ss_pred hhhhhccce-eeeeceeEeEEec-ccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-
Q 002843 750 AFFDGLCKY-ARYSKFEVQGMLR-TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS- 826 (874)
Q Consensus 750 ~f~~~l~~~-~ry~~~~~~~~l~-~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~- 826 (874)
++.+.|... .----|++.+.-+ ...+.||...|-|++|+|+|.+|||||-|.|+|+||+.|. .|...++
T Consensus 84 ~te~~l~lvyqpqavfrvrpvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~Te--------Tp~~t~Kg 155 (480)
T KOG0271|consen 84 STEDVLTLVYQPQAVFRVRPVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTE--------TPLFTCKG 155 (480)
T ss_pred chhheeeEEeccchhhcccccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCC--------CcceeecC
Confidence 344455443 2233467777777 6789999999999999999999999999999999999986 5666665
Q ss_pred CCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCcc----ceeeeeeeeeeC
Q 002843 827 NRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLS----TYCFRKKFVFTL 874 (874)
Q Consensus 827 ~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~----~~~~~~~f~~~~ 874 (874)
|..-|.||+|+| ++..||||+.||+|.+||..+++ ++.+|++-|.+|
T Consensus 156 H~~WVlcvawsP-Dgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~L 206 (480)
T KOG0271|consen 156 HKNWVLCVAWSP-DGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITAL 206 (480)
T ss_pred CccEEEEEEECC-CcchhhccccCCeEEEecCCCCCcccccccCcccceeEE
Confidence 557899999999 57799999999999999988764 499999988765
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.8e-13 Score=140.78 Aligned_cols=75 Identities=7% Similarity=-0.084 Sum_probs=65.8
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYH-HTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yL-Hs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
+++||||+|++|...+...+ .++..++..++.||+.+|.|+ |+.||+||||||+|||++ ++.++|+|||++....
T Consensus 93 ~iVmE~i~g~~l~~~~~~~~-~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 93 VLVMEFIGDDGWAAPRLKDA-PLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEEeCCCCCcchhhhcC-CCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccCC
Confidence 57999999988876644443 699999999999999999999 799999999999999998 5889999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.5e-13 Score=144.99 Aligned_cols=151 Identities=11% Similarity=0.027 Sum_probs=93.4
Q ss_pred CCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccc-cccccCCChhHHHHHHHHhHHhhcCCCCCc
Q 002843 198 HGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTK-AFVTTTMPSDAALKAAGAMMVASNASPKPV 275 (874)
Q Consensus 198 ~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~ 275 (874)
.+-.+. ++++.++|+.-++... .+..+|.|=. ++..... .++..-...+ ..-++...+....||.+.
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf--------~~~~~~~~~~~~~f~~g~--~~e~Ea~~l~rL~~~GI~ 98 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVF--------APKVKRTERFLKSFVKGD--YYENLIVQTDRVRSEGLA 98 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEe--------chhcCchHHHHHhhhhhH--HHHHHHHHHHHHHHCCCC
Confidence 455666 9999999988766444 5666777754 2111110 0000000000 012333345555677655
Q ss_pred eeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 002843 276 GVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDL 355 (874)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDL 355 (874)
.+.+......... ..+....+++|||++|.+|.++.. +++ ..+.+|+.+|..||..||+|||+
T Consensus 99 ~~~d~~~~~~~~~--------~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~gi~H~Di 161 (232)
T PRK10359 99 SLNDFYLLAERKT--------LRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQHGMVSGDP 161 (232)
T ss_pred cceEeeeeccccc--------ccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHcCCccCCC
Confidence 5543322111000 001122468999999999999842 333 34669999999999999999999
Q ss_pred CCCceEEecCCcEEEeccccch
Q 002843 356 KPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 356 KPsNILL~~~~~vKLiDFGlar 377 (874)
||+||++++++ ++++|||..+
T Consensus 162 kp~Nili~~~g-i~liDfg~~~ 182 (232)
T PRK10359 162 HKGNFIVSKNG-LRIIDLSGKR 182 (232)
T ss_pred ChHHEEEeCCC-EEEEECCCcc
Confidence 99999999888 9999999765
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.4e-13 Score=145.48 Aligned_cols=103 Identities=12% Similarity=0.127 Sum_probs=80.2
Q ss_pred ceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEE
Q 002843 757 KYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVC 835 (874)
Q Consensus 757 ~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~ 835 (874)
+||-..+-.+.+|++ +|.+||.||+|+|||+.||||+.|++|++||..++-.. -..+. |+..|.+|+
T Consensus 140 R~WD~~TeTp~~t~K-----gH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~-------g~~l~gH~K~It~La 207 (480)
T KOG0271|consen 140 RLWDLDTETPLFTCK-----GHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQI-------GRALRGHKKWITALA 207 (480)
T ss_pred EeeccCCCCcceeec-----CCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcc-------cccccCcccceeEEe
Confidence 566666666666666 35999999999999999999999999999999987321 11223 345699999
Q ss_pred EeCCCC----CEEEEeeCCCcEEEEeCCCccc---eeeeeeee
Q 002843 836 WNNYIK----NYLASADYDGVVKVCMSCRLST---YCFRKKFV 871 (874)
Q Consensus 836 wnp~~~----~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~ 871 (874)
|.|.|. .+|||+|.||+|+|||+..++. +.+|+.-|
T Consensus 208 wep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~V 250 (480)
T KOG0271|consen 208 WEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASV 250 (480)
T ss_pred ecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccce
Confidence 999863 4899999999999999997655 55555444
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.1e-12 Score=146.12 Aligned_cols=176 Identities=18% Similarity=0.154 Sum_probs=132.5
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-cccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGV-TFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gI-IHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
.+++-+||..|+|.+.|......+++.-...+++.|+.||.|+|.-.| .|+.|++.|.+++....+|++|||+.....+
T Consensus 22 ~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~ 101 (484)
T KOG1023|consen 22 MIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEE 101 (484)
T ss_pred eEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccc
Confidence 467899999999999999877789999999999999999999998866 9999999999999999999999998753320
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
... ...
T Consensus 102 ~~~-------------------------------------------------------~~~------------------- 107 (484)
T KOG1023|consen 102 TAE-------------------------------------------------------PEA------------------- 107 (484)
T ss_pred ccc-------------------------------------------------------ccc-------------------
Confidence 000 000
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCC-------CCCccchhHHHHHHHHhcCCCCchHH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-------CTTSSNIYSLGVLFFELFGRFDSERA 534 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~-------ys~kSDIwSLGVIL~ELltG~~p~~~ 534 (874)
.....-...|.|||.+.+.. .+.+.||||||++++|+++...||..
T Consensus 108 ---------------------------~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~ 160 (484)
T KOG1023|consen 108 ---------------------------HHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL 160 (484)
T ss_pred ---------------------------cchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence 00111234789999998741 46789999999999999998877732
Q ss_pred ------HHHHHHHhhc---CCCCCCCC---CCCHHHHHHHHHccccCCCCCCChhHH
Q 002843 535 ------LAAAMSDLRD---RILPPSFL---SENPKEAGFCLWQLHPEPLSRPTTREI 579 (874)
Q Consensus 535 ------~~~~~~~l~~---~~lpp~~~---~~~p~l~dLi~~cL~~dP~~RPTa~Ei 579 (874)
....+..+.. ..+.|... ...+.+..++..||..+|..||++.++
T Consensus 161 ~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i 217 (484)
T KOG1023|consen 161 RNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQI 217 (484)
T ss_pred ccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHH
Confidence 1222333333 12223222 223568899999999999999999877
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.40 E-value=1e-13 Score=150.40 Aligned_cols=161 Identities=16% Similarity=0.063 Sum_probs=101.3
Q ss_pred CceEeeccCCCCHHHHHHh---CCCC---CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccc
Q 002843 303 GLRQGSSDHGVNLREWLNA---RGHK---GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~---~~~~---lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGla 376 (874)
.++.|+-+. +||.+++.- .... +.....+.+..|++..+++||+.||+|+||||+||+++.+|.+.|.||+..
T Consensus 114 ~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~ 192 (288)
T PF14531_consen 114 RFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSL 192 (288)
T ss_dssp EEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGE
T ss_pred hhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHH
Confidence 467888886 799888642 2211 333445667799999999999999999999999999999999999999865
Q ss_pred hhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCC
Q 002843 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (874)
Q Consensus 377 r~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~ 456 (874)
...++.
T Consensus 193 ~r~g~~-------------------------------------------------------------------------- 198 (288)
T PF14531_consen 193 VRAGTR-------------------------------------------------------------------------- 198 (288)
T ss_dssp EETTEE--------------------------------------------------------------------------
T ss_pred eecCce--------------------------------------------------------------------------
Confidence 432200
Q ss_pred CCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC--------CCCCccchhHHHHHHHHhcCC
Q 002843 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG--------VCTTSSNIYSLGVLFFELFGR 528 (874)
Q Consensus 457 ~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~--------~ys~kSDIwSLGVIL~ELltG 528 (874)
......+..|.+||..... .++.+.|.|+||++||.|.|+
T Consensus 199 --------------------------------~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 199 --------------------------------YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp --------------------------------EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred --------------------------------eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 0001223578888876442 478999999999999999999
Q ss_pred CCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 529 FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 529 ~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
..||......... .............+..||..+|+++|.+|
T Consensus 247 ~lPf~~~~~~~~~---~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADP---EWDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTS---GGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccc---cccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9888522110000 00011112233558899999999999988
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.1e-12 Score=137.22 Aligned_cols=96 Identities=24% Similarity=0.325 Sum_probs=80.4
Q ss_pred cCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCC-CCEEEEeeCCC
Q 002843 773 GEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI-KNYLASADYDG 851 (874)
Q Consensus 773 ~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~-~~~laS~~~Dg 851 (874)
.-|.||+.-|.|++|+||+..+.|||.||+||+||.-..+ .|.+.+-.++.-|+||+|+|.. ..+|+|++.|+
T Consensus 99 ~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~c------k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dk 172 (315)
T KOG0279|consen 99 RRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVC------KYTIHEDSHREWVSCVRFSPNESNPIIVSASWDK 172 (315)
T ss_pred EEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccE------EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCc
Confidence 4577899999999999999999999999999999988762 2333333336779999999974 67999999999
Q ss_pred cEEEEeCCCc---cceeeeeeeeeeC
Q 002843 852 VVKVCMSCRL---STYCFRKKFVFTL 874 (874)
Q Consensus 852 ~V~~WD~~~~---~~~~~~~~f~~~~ 874 (874)
+||+||+.+- +.+-+|++.||++
T Consensus 173 tvKvWnl~~~~l~~~~~gh~~~v~t~ 198 (315)
T KOG0279|consen 173 TVKVWNLRNCQLRTTFIGHSGYVNTV 198 (315)
T ss_pred eEEEEccCCcchhhccccccccEEEE
Confidence 9999999975 3388999999875
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.2e-12 Score=140.91 Aligned_cols=105 Identities=17% Similarity=0.200 Sum_probs=86.4
Q ss_pred ceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEE
Q 002843 757 KYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVC 835 (874)
Q Consensus 757 ~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~ 835 (874)
+.|-.-+++.+..|. +|...|.+|+|+|+|-.|||||.|.++||||++.- .++..|. |.+-|+.|+
T Consensus 328 RvWDlRtgr~im~L~-----gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r--------~~ly~ipAH~nlVS~Vk 394 (459)
T KOG0272|consen 328 RVWDLRTGRCIMFLA-----GHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMR--------SELYTIPAHSNLVSQVK 394 (459)
T ss_pred heeecccCcEEEEec-----ccccceeeEeECCCceEEeecCCCCcEEEeeeccc--------ccceecccccchhhheE
Confidence 344445555565554 46999999999999999999999999999999965 3356665 556799999
Q ss_pred EeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeeeeC
Q 002843 836 WNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFVFTL 874 (874)
Q Consensus 836 wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~~~ 874 (874)
|+|..+..|+||+||++|+||--.+.++ +-+|..=|+||
T Consensus 395 ~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~ 436 (459)
T KOG0272|consen 395 YSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISL 436 (459)
T ss_pred ecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEE
Confidence 9998899999999999999999987654 88888888775
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.3e-12 Score=134.59 Aligned_cols=193 Identities=13% Similarity=0.042 Sum_probs=136.8
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL 342 (874)
-.++.-.||++.-++.+..+.-+ ..++..||+-|+|...|... +-.++..++..++..|+.|+
T Consensus 239 p~lrifshpnilpvlgacnsppn----------------lv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargm 302 (448)
T KOG0195|consen 239 PALRIFSHPNILPVLGACNSPPN----------------LVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGM 302 (448)
T ss_pred cceeeecCCchhhhhhhccCCCC----------------ceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhH
Confidence 35677778877777666443322 24578899999999999764 33678889999999999999
Q ss_pred HHHHHCC-C-cccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 343 DYHHTQG-V-TFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 343 ~yLHs~g-I-IHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
+|||+.. + .-.-|....++++++-+.+|. .+-++ |++.
T Consensus 303 aflhslep~ipr~~lns~hvmidedltaris-mad~k---------------------------fsfq------------ 342 (448)
T KOG0195|consen 303 AFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTK---------------------------FSFQ------------ 342 (448)
T ss_pred HHHhhcchhhhhhhcccceEEecchhhhhee-cccce---------------------------eeee------------
Confidence 9999984 3 344677888888887665542 00000 0000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
.....-.|.||+
T Consensus 343 --------------------------------------------------------------------e~gr~y~pawms 354 (448)
T KOG0195|consen 343 --------------------------------------------------------------------EVGRAYSPAWMS 354 (448)
T ss_pred --------------------------------------------------------------------ccccccCcccCC
Confidence 012233468999
Q ss_pred cccccCCCCC---CccchhHHHHHHHHhcCCCCchHHHHHH---HHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 501 PEELSGGVCT---TSSNIYSLGVLFFELFGRFDSERALAAA---MSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 501 PEvl~g~~ys---~kSDIwSLGVIL~ELltG~~p~~~~~~~---~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
||.+...+-+ .++|+|||.++||||.|...||.+.... |+...++..+...+..++....|+.-|+..||.+||
T Consensus 355 pealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrp 434 (448)
T KOG0195|consen 355 PEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRP 434 (448)
T ss_pred HHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCC
Confidence 9999987643 6899999999999999998888654332 333333433444456678899999999999999999
Q ss_pred ChhHHh
Q 002843 575 TTREIL 580 (874)
Q Consensus 575 Ta~EiL 580 (874)
.+..|+
T Consensus 435 kfdmiv 440 (448)
T KOG0195|consen 435 KFDMIV 440 (448)
T ss_pred Ccceeh
Confidence 998774
|
|
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.5e-12 Score=134.51 Aligned_cols=94 Identities=16% Similarity=0.089 Sum_probs=80.6
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcE
Q 002843 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V 853 (874)
.+.||.+.|+.+.|+|||.+|||||.|+.|-||++...++... +.-.|.+.|..|.|++ ++++|.|++.|++|
T Consensus 42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~------~lkgHsgAVM~l~~~~-d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFW------VLKGHSGAVMELHGMR-DGSHILSCGTDKTV 114 (338)
T ss_pred hcCCCcceEEEEEECCCCCeEeecCCcceEEEEecccccccee------eeccccceeEeeeecc-CCCEEEEecCCceE
Confidence 4668899999999999999999999999999999776543221 1114567899999999 69999999999999
Q ss_pred EEEeCCCccc---eeeeeeeeeeC
Q 002843 854 KVCMSCRLST---YCFRKKFVFTL 874 (874)
Q Consensus 854 ~~WD~~~~~~---~~~~~~f~~~~ 874 (874)
..||+.++++ +.+|+.|||+|
T Consensus 115 ~~wD~~tG~~~rk~k~h~~~vNs~ 138 (338)
T KOG0265|consen 115 RGWDAETGKRIRKHKGHTSFVNSL 138 (338)
T ss_pred EEEecccceeeehhccccceeeec
Confidence 9999999865 89999999986
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.1e-12 Score=132.59 Aligned_cols=76 Identities=11% Similarity=-0.119 Sum_probs=65.7
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs-~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
.+++|||++|+++...+.... .++..++..++.|++.+|.++|+ +||+||||||+|||++ ++.++|+|||+++.+.
T Consensus 92 ~~lVmE~~~g~~~~~~~l~~~-~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 92 NVLVMEFIGDDGSPAPRLKDV-PLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred CEEEEEEecCCCchhhhhhhc-cCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence 368999999986654432333 68899999999999999999999 9999999999999998 8999999999998655
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.8e-12 Score=136.60 Aligned_cols=137 Identities=16% Similarity=0.188 Sum_probs=113.6
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC-----CcEEEeccccch
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-----NQVKYIGPIIQK 377 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~-----~~vKLiDFGlar 377 (874)
-.||||+. |.+|.+++.-.++.|+...+..++.|++.-++|+|++.+|.|||||+||||... +.+.++|||+|+
T Consensus 99 NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 99 NILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 35799988 699999999888899999999999999999999999999999999999999754 448999999999
Q ss_pred hccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCC
Q 002843 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (874)
Q Consensus 378 ~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~ 457 (874)
...|+....+++ -
T Consensus 178 ~YrDp~TkqHIP---------------------------------------------------------------Y---- 190 (449)
T KOG1165|consen 178 EYRDPKTKQHIP---------------------------------------------------------------Y---- 190 (449)
T ss_pred hhcCccccccCc---------------------------------------------------------------c----
Confidence 776442211110 0
Q ss_pred CcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH
Q 002843 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA 536 (874)
Q Consensus 458 ~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~ 536 (874)
...-+.-||..||+--...|..-+..-|+=|||-++++.|-|..||....
T Consensus 191 -----------------------------rE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 191 -----------------------------REHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred -----------------------------ccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 00125578999999988888888899999999999999999999986544
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.6e-12 Score=130.08 Aligned_cols=101 Identities=12% Similarity=0.012 Sum_probs=73.6
Q ss_pred HHHHHhHHhhc-----CCCCCceeccceeecCcccCCcCCCCCccccCC--CceEeec--cCCCCHHHHHHhCCCCCCHH
Q 002843 259 KAAGAMMVASN-----ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG--GLRQGSS--DHGVNLREWLNARGHKGKRI 329 (874)
Q Consensus 259 ~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~lvMEy--~~GgsL~~~L~~~~~~lse~ 329 (874)
...+...+... .||+++.++.....+.. .| -.++||| +.+++|.++|++. .+++.
T Consensus 43 ~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g--------------~g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~ 106 (210)
T PRK10345 43 IRRELKYYAHLSRRLIDWSGIPRYYGTVETDCG--------------TGYVYDVIADFDGKPSITLTEFAEQC--RYEED 106 (210)
T ss_pred HHHHHHHHHHhhccCCCCcccceeeEEEEeCCC--------------CeEEEEEEecCCCCcchhHHHHHHcc--cccHh
Confidence 33444455555 57888888877653321 11 0258999 5689999999764 36666
Q ss_pred HHHHHHHHHHHHH-HHHHHCCCcccCCCCCceEEecC----CcEEEeccccch
Q 002843 330 ECLYIFRQIVALV-DYHHTQGVTFLDLKPSSFKLLQS----NQVKYIGPIIQK 377 (874)
Q Consensus 330 e~~~I~~QIl~aL-~yLHs~gIIHRDLKPsNILL~~~----~~vKLiDFGlar 377 (874)
..++.|++.++ +|||+++||||||||+|||++.. .+++|+||+.++
T Consensus 107 --~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 107 --VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred --HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 46788888888 99999999999999999999743 379999955444
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.2e-12 Score=131.97 Aligned_cols=137 Identities=15% Similarity=0.117 Sum_probs=109.3
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEe---cCCcEEEeccccchhc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL---QSNQVKYIGPIIQKET 379 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~---~~~~vKLiDFGlar~~ 379 (874)
-.+||+.. |.+|.+++.-..+.++...++-++-|++.-++|+|.+++|||||||+|||+. ..+++-+||||+++..
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred ceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 46899988 6999999976666899999999999999999999999999999999999996 3477999999999976
Q ss_pred cccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCc
Q 002843 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (874)
Q Consensus 380 ~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~ 459 (874)
.+.... .|.+ -
T Consensus 165 ~d~~t~------------------------------------------------------------~HIp---y------ 175 (341)
T KOG1163|consen 165 RDIRTR------------------------------------------------------------QHIP---Y------ 175 (341)
T ss_pred cccccc------------------------------------------------------------ccCc---c------
Confidence 522110 0000 0
Q ss_pred ccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH
Q 002843 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA 536 (874)
Q Consensus 460 ~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~ 536 (874)
..-....||..|.+--...+..-+..-|+=|+|.+|..+.-|.-||....
T Consensus 176 ---------------------------re~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 176 ---------------------------REDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred ---------------------------ccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 00035678999998877776667788999999999999999999985543
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.2e-12 Score=138.72 Aligned_cols=81 Identities=16% Similarity=0.282 Sum_probs=71.8
Q ss_pred CCCCCCCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCC
Q 002843 774 EFNNSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
....|+..|+|++|+|.+++ |||||.||+|+|||++++. .|++.+. |...|.+|.|||+..++|||++.||
T Consensus 267 ~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~-------~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~ 339 (422)
T KOG0264|consen 267 SVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLN-------KPLHTFEGHEDEVFQVEWSPHNETVLASSGTDR 339 (422)
T ss_pred cccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcc-------cCceeccCCCcceEEEEeCCCCCceeEecccCC
Confidence 34567999999999999997 9999999999999999873 3666655 6678999999999999999999999
Q ss_pred cEEEEeCCCc
Q 002843 852 VVKVCMSCRL 861 (874)
Q Consensus 852 ~V~~WD~~~~ 861 (874)
.|.|||+++-
T Consensus 340 rl~vWDls~i 349 (422)
T KOG0264|consen 340 RLNVWDLSRI 349 (422)
T ss_pred cEEEEecccc
Confidence 9999999963
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.28 E-value=7e-12 Score=153.24 Aligned_cols=128 Identities=14% Similarity=0.116 Sum_probs=107.4
Q ss_pred cCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC-------CcEEEec
Q 002843 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-------NQVKYIG 372 (874)
Q Consensus 300 ~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~-------~~vKLiD 372 (874)
..+..|++||.+-|+|.+++...+ .+++..++.|..|++..|+.||.++|||+||||+|+||... ..++|||
T Consensus 766 ~~~S~lv~ey~~~Gtlld~~N~~~-~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 766 QNASVLVSEYSPYGTLLDLINTNK-VMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred CCcceeeeeccccccHHHhhccCC-CCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEe
Confidence 344568999999999999998554 89999999999999999999999999999999999999632 4489999
Q ss_pred cccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCC
Q 002843 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (874)
Q Consensus 373 FGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 452 (874)
||-+-++.
T Consensus 845 fG~siDm~------------------------------------------------------------------------ 852 (974)
T KOG1166|consen 845 FGRSIDMK------------------------------------------------------------------------ 852 (974)
T ss_pred cccceeee------------------------------------------------------------------------
Confidence 99765433
Q ss_pred CCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCC
Q 002843 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRF 529 (874)
Q Consensus 453 ~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~ 529 (874)
.+| ..+.+...++|-.+-.+|+..|.+++..+|.|.|.-+++-||.|.
T Consensus 853 ---------------------lfp--------~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 853 ---------------------LFP--------DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred ---------------------EcC--------CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 000 012235678888999999999999999999999999999999884
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.25 E-value=9.3e-13 Score=157.14 Aligned_cols=185 Identities=19% Similarity=0.170 Sum_probs=143.2
Q ss_pred CceEeeccCCCCHHHHH-HhCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCceEEecCC-cEEEeccccchhc
Q 002843 303 GLRQGSSDHGVNLREWL-NARGHKGKRIECLYIFRQIVALVDYHH-TQGVTFLDLKPSSFKLLQSN-QVKYIGPIIQKET 379 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L-~~~~~~lse~e~~~I~~QIl~aL~yLH-s~gIIHRDLKPsNILL~~~~-~vKLiDFGlar~~ 379 (874)
.++.+||..|+++.+-+ ......++...+..++.|+..+|.|+| ..++.||||||+|.+++.++ .+++.|||+|...
T Consensus 96 ~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 96 YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred cccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 45689999999999999 544336888999999999999999999 99999999999999999999 9999999998643
Q ss_pred cccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCc
Q 002843 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (874)
Q Consensus 380 ~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~ 459 (874)
... + ..
T Consensus 176 ~~~-----------------------------------~---------------------g~------------------ 181 (601)
T KOG0590|consen 176 RNK-----------------------------------N---------------------GA------------------ 181 (601)
T ss_pred ccc-----------------------------------C---------------------Cc------------------
Confidence 300 0 00
Q ss_pred ccccccCcCCCCCCCCCcccccccccccccccccc-cccccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHHHH
Q 002843 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE-EKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERALAA 537 (874)
Q Consensus 460 ~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G-T~~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~~~ 537 (874)
...+...+| ++.|+|||...+.. .....|+||.|+++.-+++|..|+.....
T Consensus 182 --------------------------~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~ 235 (601)
T KOG0590|consen 182 --------------------------ERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSR 235 (601)
T ss_pred --------------------------ceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccc
Confidence 001134566 89999999999854 47899999999999999999877643222
Q ss_pred HHHH------hhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 538 AMSD------LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 538 ~~~~------l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
.... .+.......+........+++.++|..+|..|.+..++-.++|+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 236 KDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ccccceeecccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 1111 1111123334455567889999999999999999999999999987
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.25 E-value=9.2e-12 Score=136.15 Aligned_cols=124 Identities=17% Similarity=0.113 Sum_probs=98.0
Q ss_pred HHHHHHHHhhhhhccccCCCCCcccccchhhhhhhhhhhhhccccccCCCCccchhhhhccceeeeeceeEeEEecccCC
Q 002843 696 LNQLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEF 775 (874)
Q Consensus 696 ~~~l~~~y~~~r~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~l~~~~ry~~~~~~~~l~~~~~ 775 (874)
+-+|+++--..-+..+-|+++++...+-| +-||.+-++...+|.+ .
T Consensus 254 l~~l~gH~~RVs~VafHPsG~~L~TasfD--------------------------------~tWRlWD~~tk~ElL~--Q 299 (459)
T KOG0272|consen 254 LQDLEGHLARVSRVAFHPSGKFLGTASFD--------------------------------STWRLWDLETKSELLL--Q 299 (459)
T ss_pred hhhhhcchhhheeeeecCCCceeeecccc--------------------------------cchhhcccccchhhHh--h
Confidence 44777777444444567888877777655 5677777777777763 2
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
-||+-.|.+|+|+|||.++||||.|-.=+|||++++. .+..+. |-..|..|+|+| ++-+|||||.|++++
T Consensus 300 EGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr--------~im~L~gH~k~I~~V~fsP-NGy~lATgs~Dnt~k 370 (459)
T KOG0272|consen 300 EGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGR--------CIMFLAGHIKEILSVAFSP-NGYHLATGSSDNTCK 370 (459)
T ss_pred cccccccceeEecCCCceeeccCccchhheeecccCc--------EEEEecccccceeeEeECC-CceEEeecCCCCcEE
Confidence 4799999999999999999999999999999999982 233344 346799999999 588999999999999
Q ss_pred EEeCCCcc
Q 002843 855 VCMSCRLS 862 (874)
Q Consensus 855 ~WD~~~~~ 862 (874)
|||+...+
T Consensus 371 VWDLR~r~ 378 (459)
T KOG0272|consen 371 VWDLRMRS 378 (459)
T ss_pred Eeeecccc
Confidence 99998543
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-11 Score=144.20 Aligned_cols=92 Identities=15% Similarity=0.285 Sum_probs=81.0
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCc
Q 002843 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
-+.+|-+-|.|++|+|+..|+||||.|+++++||+.++ ..++.+. |++.|++|+|+| ++.+||||+.||.
T Consensus 530 ifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G--------~~VRiF~GH~~~V~al~~Sp-~Gr~LaSg~ed~~ 600 (707)
T KOG0263|consen 530 IFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTG--------NSVRIFTGHKGPVTALAFSP-CGRYLASGDEDGL 600 (707)
T ss_pred hhcccccccceEEECCcccccccCCCCceEEEEEcCCC--------cEEEEecCCCCceEEEEEcC-CCceEeecccCCc
Confidence 36788999999999999999999999999999999987 2355554 678999999999 6999999999999
Q ss_pred EEEEeCCCccc---eeeeeeeeeeC
Q 002843 853 VKVCMSCRLST---YCFRKKFVFTL 874 (874)
Q Consensus 853 V~~WD~~~~~~---~~~~~~f~~~~ 874 (874)
|+|||+..+.. +.+|++-|+||
T Consensus 601 I~iWDl~~~~~v~~l~~Ht~ti~Sl 625 (707)
T KOG0263|consen 601 IKIWDLANGSLVKQLKGHTGTIYSL 625 (707)
T ss_pred EEEEEcCCCcchhhhhcccCceeEE
Confidence 99999998644 88888888875
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=8.2e-12 Score=129.70 Aligned_cols=67 Identities=19% Similarity=0.144 Sum_probs=58.0
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC-CCCceEEecCCcEEEeccccchh
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDL-KPSSFKLLQSNQVKYIGPIIQKE 378 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDL-KPsNILL~~~~~vKLiDFGlar~ 378 (874)
+++|||+.|.+|.+.+.. ....++.|++.+|.++|++||+|||| ||+|||++.++.++|+|||++..
T Consensus 74 ~lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~ 141 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVR 141 (218)
T ss_pred EEEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCcee
Confidence 679999999999765421 12458899999999999999999999 79999999999999999999873
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.9e-11 Score=140.39 Aligned_cols=98 Identities=19% Similarity=0.156 Sum_probs=77.7
Q ss_pred CCCCCCCeeEEEECC-CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCc
Q 002843 775 FNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 775 ~~~~~~~V~si~F~~-d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
+.+|++.|.+|+|+| |+.+|||||.|++|+|||+.+.... .....|+..+. |..+|.+|+|+|...++||||+.|++
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~-~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLT-QNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccc-cccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 567899999999999 8889999999999999999864110 11224566665 55789999999976789999999999
Q ss_pred EEEEeCCCccc---eeeeeeeeee
Q 002843 853 VKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 853 V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
|+|||+.+++. +..|...|++
T Consensus 150 VrIWDl~tg~~~~~l~~h~~~V~s 173 (493)
T PTZ00421 150 VNVWDVERGKAVEVIKCHSDQITS 173 (493)
T ss_pred EEEEECCCCeEEEEEcCCCCceEE
Confidence 99999998754 4556655554
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.2e-11 Score=139.41 Aligned_cols=93 Identities=14% Similarity=0.176 Sum_probs=77.0
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCCCEEEEeeCCCc
Q 002843 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
.+.+|...|++++|+|||+++|||+.|++|||||+... . .-+..+ .|...|.|++|+|. ++.|+||++|++
T Consensus 198 ~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~------~-~~~~~l~gH~~~v~~~~f~p~-g~~i~Sgs~D~t 269 (456)
T KOG0266|consen 198 ELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDD------G-RNLKTLKGHSTYVTSVAFSPD-GNLLVSGSDDGT 269 (456)
T ss_pred cccccccceeeeEECCCCcEEEEecCCceEEEeeccCC------C-eEEEEecCCCCceEEEEecCC-CCEEEEecCCCc
Confidence 34678999999999999999999999999999999322 1 222333 56678999999996 599999999999
Q ss_pred EEEEeCCCccc---eeeeeeeeeeC
Q 002843 853 VKVCMSCRLST---YCFRKKFVFTL 874 (874)
Q Consensus 853 V~~WD~~~~~~---~~~~~~f~~~~ 874 (874)
|+|||+.+++. +..|...|.++
T Consensus 270 vriWd~~~~~~~~~l~~hs~~is~~ 294 (456)
T KOG0266|consen 270 VRIWDVRTGECVRKLKGHSDGISGL 294 (456)
T ss_pred EEEEeccCCeEEEeeeccCCceEEE
Confidence 99999998644 88888887753
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=9.3e-11 Score=121.33 Aligned_cols=70 Identities=24% Similarity=0.224 Sum_probs=63.5
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchh
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~ 378 (874)
.+++|||++|++|.+++.... . +...++.+|+.+|.++|+.||+|+|++|.|||++ ++.++++|||+++.
T Consensus 74 ~~lv~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 74 FIIVMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CEEEEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 467999999999999997643 2 8899999999999999999999999999999999 78999999998874
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.1e-12 Score=132.59 Aligned_cols=126 Identities=17% Similarity=0.241 Sum_probs=105.8
Q ss_pred cccCCCCCcccccchhhhhhhhhhhhhccccccCCCCccchhhhhccceeeeeceeEeEEecc---cCCCCCCCCeeEEE
Q 002843 710 IQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRT---GEFNNSANVICSIS 786 (874)
Q Consensus 710 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~l~~~~ry~~~~~~~~l~~---~~~~~~~~~V~si~ 786 (874)
.+.|+++++.+++.| +.+..|.|.+.++..+|++ ..+..+-..|.||.
T Consensus 220 ~FSPDgqyLvsgSvD-----------------------------GFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~ 270 (508)
T KOG0275|consen 220 RFSPDGQYLVSGSVD-----------------------------GFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCIS 270 (508)
T ss_pred eeCCCCceEeecccc-----------------------------ceeeeehhccchhhhhhhhhhhcceeecccceEEEe
Confidence 357888888888777 5667899999999999993 33566889999999
Q ss_pred ECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee--cCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc-
Q 002843 787 FDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM--SNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST- 863 (874)
Q Consensus 787 F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~--~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~- 863 (874)
|++|.+.||||+.|++||||-+.++.. ++.+ .|...|.||.|+. +.++|.|+++|-+|+|.-+..|+.
T Consensus 271 FSRDsEMlAsGsqDGkIKvWri~tG~C--------lRrFdrAHtkGvt~l~FSr-D~SqiLS~sfD~tvRiHGlKSGK~L 341 (508)
T KOG0275|consen 271 FSRDSEMLASGSQDGKIKVWRIETGQC--------LRRFDRAHTKGVTCLSFSR-DNSQILSASFDQTVRIHGLKSGKCL 341 (508)
T ss_pred ecccHHHhhccCcCCcEEEEEEecchH--------HHHhhhhhccCeeEEEEcc-CcchhhcccccceEEEeccccchhH
Confidence 999999999999999999999998721 1111 2456799999998 578999999999999999998866
Q ss_pred --eeeeeeeeee
Q 002843 864 --YCFRKKFVFT 873 (874)
Q Consensus 864 --~~~~~~f~~~ 873 (874)
+++|+.|||-
T Consensus 342 KEfrGHsSyvn~ 353 (508)
T KOG0275|consen 342 KEFRGHSSYVNE 353 (508)
T ss_pred HHhcCccccccc
Confidence 8999999983
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.2e-11 Score=140.44 Aligned_cols=107 Identities=17% Similarity=0.232 Sum_probs=89.3
Q ss_pred ceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEE
Q 002843 757 KYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVC 835 (874)
Q Consensus 757 ~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~ 835 (874)
...|+|.+..-+.+- .+.||..+|..+.|+|-|=||||||.|++-++|..... +|++.+. |.+.|.|+.
T Consensus 473 ~svRLWsl~t~s~~V--~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~--------~PlRifaghlsDV~cv~ 542 (707)
T KOG0263|consen 473 SSVRLWSLDTWSCLV--IYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHN--------KPLRIFAGHLSDVDCVS 542 (707)
T ss_pred cceeeeecccceeEE--EecCCCcceeeEEecCCceEEEecCCCceeeeeecccC--------CchhhhcccccccceEE
Confidence 456666666655554 12378999999999999999999999999999998864 7888876 558999999
Q ss_pred EeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeeeeC
Q 002843 836 WNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFVFTL 874 (874)
Q Consensus 836 wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~~~ 874 (874)
|.| +.+++|+||.|.+|++||+.+|.. |.+|++=|.+|
T Consensus 543 FHP-Ns~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al 583 (707)
T KOG0263|consen 543 FHP-NSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTAL 583 (707)
T ss_pred ECC-cccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEE
Confidence 999 599999999999999999999844 88888766553
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.2e-11 Score=138.00 Aligned_cols=122 Identities=15% Similarity=0.165 Sum_probs=94.8
Q ss_pred HHHHHHhhhhhccccCCCCCcccccchhhhhhhhhhhhhccccccCCCCccchhhhhccceeee-eceeEeEEecccCCC
Q 002843 698 QLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARY-SKFEVQGMLRTGEFN 776 (874)
Q Consensus 698 ~l~~~y~~~r~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~l~~~~ry-~~~~~~~~l~~~~~~ 776 (874)
.|+++.+-.+.....|++.++.+++.| ...+.+.- ...+.+-+|+
T Consensus 198 ~l~~h~~~v~~~~fs~d~~~l~s~s~D-----------------------------~tiriwd~~~~~~~~~~l~----- 243 (456)
T KOG0266|consen 198 ELSGHTRGVSDVAFSPDGSYLLSGSDD-----------------------------KTLRIWDLKDDGRNLKTLK----- 243 (456)
T ss_pred cccccccceeeeEECCCCcEEEEecCC-----------------------------ceEEEeeccCCCeEEEEec-----
Confidence 346777777777788888887777777 11122222 3334444444
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKV 855 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~ 855 (874)
+|.+.|+|++|+|+|+++++||.|++|+|||++++ .++..+. |.+.|++++|++ +.++|+++++||+|+|
T Consensus 244 gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~--------~~~~~l~~hs~~is~~~f~~-d~~~l~s~s~d~~i~v 314 (456)
T KOG0266|consen 244 GHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTG--------ECVRKLKGHSDGISGLAFSP-DGNLLVSASYDGTIRV 314 (456)
T ss_pred CCCCceEEEEecCCCCEEEEecCCCcEEEEeccCC--------eEEEeeeccCCceEEEEECC-CCCEEEEcCCCccEEE
Confidence 56999999999999999999999999999999985 4445555 456899999999 6889999999999999
Q ss_pred EeCCCcc
Q 002843 856 CMSCRLS 862 (874)
Q Consensus 856 WD~~~~~ 862 (874)
||+.+++
T Consensus 315 wd~~~~~ 321 (456)
T KOG0266|consen 315 WDLETGS 321 (456)
T ss_pred EECCCCc
Confidence 9999886
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.9e-11 Score=139.82 Aligned_cols=66 Identities=20% Similarity=0.197 Sum_probs=60.4
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchh
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~ 378 (874)
.+++|||++|++|.+++. ....++.||+.+|.|||+.||+||||||+|||+ .++.++|+|||+++.
T Consensus 411 ~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 367999999999999986 356799999999999999999999999999999 678999999999975
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.5e-11 Score=124.58 Aligned_cols=90 Identities=21% Similarity=0.285 Sum_probs=78.5
Q ss_pred CCCCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCCCCcccccCeeeecCC-CceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 777 NSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR-SKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~-~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
-|...|.|..|+.-+.+ +||||+|+.||+||+++. ..|+-++.++ =.|..|.|||++.++|||++||.|++
T Consensus 188 ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~-------r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~r 260 (311)
T KOG0277|consen 188 AHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNL-------RTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVR 260 (311)
T ss_pred eccceeEeecccccCCcEEEecCCCceEEEEehhhc-------cccceeecCCceEEEEEecCcchhhHhhhccccceEE
Confidence 35788999999999987 999999999999999986 3678887655 47999999999999999999999999
Q ss_pred EEeCCCc----cceeeeeeeeee
Q 002843 855 VCMSCRL----STYCFRKKFVFT 873 (874)
Q Consensus 855 ~WD~~~~----~~~~~~~~f~~~ 873 (874)
|||..+. .+...|+-||..
T Consensus 261 iw~~~~~ds~~e~~~~HtEFv~g 283 (311)
T KOG0277|consen 261 IWDPERQDSAIETVDHHTEFVCG 283 (311)
T ss_pred ecccccchhhhhhhhccceEEec
Confidence 9999864 337889999864
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.14 E-value=6.8e-11 Score=121.37 Aligned_cols=67 Identities=19% Similarity=0.175 Sum_probs=60.4
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchh
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~ 378 (874)
.+++|||++|++|.+++.... . .++.||+.+|.+||+.||+|+|++|.||+++ ++.++++|||+++.
T Consensus 72 ~~lv~e~~~g~~l~~~~~~~~--~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 72 KTIVMEYIEGKPLKDVIEEGN--D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CEEEEEEECCccHHHHHhhcH--H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 367999999999999986643 1 8899999999999999999999999999999 89999999998874
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.6e-10 Score=134.80 Aligned_cols=102 Identities=14% Similarity=0.197 Sum_probs=75.4
Q ss_pred ceeeeeceeEeEEecccCCCCCCCCeeEEEECCC-CCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEE
Q 002843 757 KYARYSKFEVQGMLRTGEFNNSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCV 834 (874)
Q Consensus 757 ~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d-~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l 834 (874)
++++..+...+..| .+|.+.|.+|+|+|+ +.+|||||.|++|+|||+.+..........|+..+. |...|.+|
T Consensus 57 ~L~~~~r~~~v~~L-----~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sV 131 (568)
T PTZ00420 57 RLENQMRKPPVIKL-----KGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISII 131 (568)
T ss_pred EeeecCCCceEEEE-----cCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEE
Confidence 44444444444444 457999999999997 789999999999999999864111111112444444 56789999
Q ss_pred EEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 835 CWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 835 ~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
+|+|....+||||+.||+|+|||+.+++.
T Consensus 132 af~P~g~~iLaSgS~DgtIrIWDl~tg~~ 160 (568)
T PTZ00420 132 DWNPMNYYIMCSSGFDSFVNIWDIENEKR 160 (568)
T ss_pred EECCCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 99997667889999999999999998754
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.13 E-value=8.2e-11 Score=126.43 Aligned_cols=93 Identities=18% Similarity=0.145 Sum_probs=75.0
Q ss_pred ccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCC-CCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCC
Q 002843 772 TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALF-NDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD 850 (874)
Q Consensus 772 ~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~-~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~D 850 (874)
+.-+.+|-+||.||+++|-+++|||||.|++|||||++++. ...+.+ |-+.|..|++|+ ...+|.|++.|
T Consensus 144 ~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltG--------hi~~vr~vavS~-rHpYlFs~ged 214 (460)
T KOG0285|consen 144 YRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTG--------HIETVRGVAVSK-RHPYLFSAGED 214 (460)
T ss_pred hhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecc--------hhheeeeeeecc-cCceEEEecCC
Confidence 45567899999999999999999999999999999999972 222233 356788999998 46699999999
Q ss_pred CcEEEEeCCCccc---eeeeeeeeee
Q 002843 851 GVVKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 851 g~V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
+.|+.||+...+- |-+|+.-|-+
T Consensus 215 k~VKCwDLe~nkvIR~YhGHlS~V~~ 240 (460)
T KOG0285|consen 215 KQVKCWDLEYNKVIRHYHGHLSGVYC 240 (460)
T ss_pred CeeEEEechhhhhHHHhccccceeEE
Confidence 9999999986433 6666655543
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.3e-11 Score=138.90 Aligned_cols=226 Identities=18% Similarity=0.143 Sum_probs=167.6
Q ss_pred cccCCChhHHHHHHHH-hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCC
Q 002843 248 VTTTMPSDAALKAAGA-MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKG 326 (874)
Q Consensus 248 ~~~~~~~d~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~l 326 (874)
+..+.|.+..++..+. .......|++++...+.....+... +..|+|. .+|.++.......+
T Consensus 153 ~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf----------------iqtE~~~-~sl~~~~~~~~~~~ 215 (524)
T KOG0601|consen 153 IPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF----------------IQTELCG-ESLQSYCHTPCNFL 215 (524)
T ss_pred CCCCCccccccccchhhcccccCccccccccCcccccCCcce----------------eeecccc-chhHHhhhcccccC
Confidence 3445566666655443 4445555666666555555444433 3677775 89999998877679
Q ss_pred CHHHHHHHHHHHHH----HHHHHHHCCCcccCCCCCceEEecC-CcEEEeccccchhccccccCCCCcchhhhhhcccch
Q 002843 327 KRIECLYIFRQIVA----LVDYHHTQGVTFLDLKPSSFKLLQS-NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAE 401 (874)
Q Consensus 327 se~e~~~I~~QIl~----aL~yLHs~gIIHRDLKPsNILL~~~-~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~e 401 (874)
+....+.++.+... ||.++|+.+|+|-|+||.||++..+ ...+++|||+...+.+...
T Consensus 216 p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~----------------- 278 (524)
T KOG0601|consen 216 PDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNF----------------- 278 (524)
T ss_pred CchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEccCCcc-----------------
Confidence 99999999999999 9999999999999999999999988 8899999998875552110
Q ss_pred hhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccc
Q 002843 402 EEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNT 481 (874)
Q Consensus 402 i~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~ 481 (874)
.. .|...
T Consensus 279 ------~~-----------------------------------------------------------~~~~~-------- 285 (524)
T KOG0601|consen 279 ------SS-----------------------------------------------------------VFKVS-------- 285 (524)
T ss_pred ------cc-----------------------------------------------------------ceeee--------
Confidence 00 00000
Q ss_pred ccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchH-HHHHHHHHhhcCCCCCCCCCC-CHHHH
Q 002843 482 AQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSER-ALAAAMSDLRDRILPPSFLSE-NPKEA 559 (874)
Q Consensus 482 ~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~-~~~~~~~~l~~~~lpp~~~~~-~p~l~ 559 (874)
....|..-|++||.+.+ .+++++|||+||.++.+-.++...+. .....+..+++..+|..+... ...+.
T Consensus 286 --------~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~ 356 (524)
T KOG0601|consen 286 --------KRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLR 356 (524)
T ss_pred --------ecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhh
Confidence 12245668999999875 68999999999999999998865442 222335667777788887743 45566
Q ss_pred HHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 560 GFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 560 dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
..+..|+..+|-.|+++..+++++++....
T Consensus 357 ~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~ 386 (524)
T KOG0601|consen 357 SVTSQMLDEDPRLRLTAQILTALNVIHSKL 386 (524)
T ss_pred hHHHHhcCcchhhhhHHHHHhccccccchh
Confidence 799999999999999999999999998544
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.8e-11 Score=144.50 Aligned_cols=222 Identities=14% Similarity=0.077 Sum_probs=157.9
Q ss_pred ccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchh
Q 002843 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (874)
Q Consensus 299 ~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~ 378 (874)
|.....|+|+|..|++|...|...+ ..+..-++.++..++.+++|||+..++|||++|.|+|+..+++.++.+||+.+.
T Consensus 875 ~rsP~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~ 953 (1205)
T KOG0606|consen 875 CRSPLPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSK 953 (1205)
T ss_pred CCCCcchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccc
Confidence 7777899999999999999998877 688889999999999999999999999999999999999999999999996654
Q ss_pred ccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCC
Q 002843 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (874)
Q Consensus 379 ~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~ 458 (874)
...-. +.... -|..+.. .++. ..+...+.
T Consensus 954 vg~~~-----p~~~~-----------sg~~~~~---------------~~~~--------------------~~~~~~~~ 982 (1205)
T KOG0606|consen 954 VGLIP-----PTTDL-----------SGPSSSG---------------TPRR--------------------LSRSERRP 982 (1205)
T ss_pred ccccc-----CcCCc-----------ccccccC---------------cccc--------------------cccccccc
Confidence 33100 00000 0000000 0000 00000000
Q ss_pred cccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--H
Q 002843 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--A 536 (874)
Q Consensus 459 ~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~ 536 (874)
.. .......-...+||+.|.+||.+.+.....++|.|++|++++|.++|.+||... .
T Consensus 983 ~l---------------------~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq 1041 (1205)
T KOG0606|consen 983 QL---------------------SADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQ 1041 (1205)
T ss_pred cc---------------------ccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchh
Confidence 00 000011124678999999999999988899999999999999999999998542 2
Q ss_pred HHHHHhhcCCC-CC-CCCCCCHHHHHHHHHccccCCCCCCChh---HHhhhHHHHhhHhhhh
Q 002843 537 AAMSDLRDRIL-PP-SFLSENPKEAGFCLWQLHPEPLSRPTTR---EILQSEVTNEFQEVCA 593 (874)
Q Consensus 537 ~~~~~l~~~~l-pp-~~~~~~p~l~dLi~~cL~~dP~~RPTa~---EiL~hp~~~~~~~~~~ 593 (874)
..+..+..+.. ++ -.....+...+++..+|..+|.+|..+. ++-.|+||+...+...
T Consensus 1042 ~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~l 1103 (1205)
T KOG0606|consen 1042 QIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWENL 1103 (1205)
T ss_pred hhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCcccc
Confidence 23333333322 22 2234457788999999999999998876 8999999998876653
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.4e-11 Score=129.72 Aligned_cols=127 Identities=20% Similarity=0.273 Sum_probs=92.4
Q ss_pred HhHHHHHHHHhh-hhhccccCCCCCcccccchhhhhhhhhhhhhccccccCCCCccchhhhhccceeeeeceeEeEEecc
Q 002843 694 RNLNQLERAYFS-MRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRT 772 (874)
Q Consensus 694 ~~~~~l~~~y~~-~r~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~l~~~~ry~~~~~~~~l~~ 772 (874)
=||+.+-++--+ .|+....+++..+.++|++ +..||+.-+ +.++...+.
T Consensus 128 fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~g-----------------------------G~iKyWqpn-mnnVk~~~a 177 (464)
T KOG0284|consen 128 FNFETILQAHDSPVRTMKWSHNGTWMISGDKG-----------------------------GMIKYWQPN-MNNVKIIQA 177 (464)
T ss_pred eeHHHHhhhhcccceeEEEccCCCEEEEcCCC-----------------------------ceEEecccc-hhhhHHhhH
Confidence 356766655433 5555555666556666555 556766654 333333331
Q ss_pred cCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCC
Q 002843 773 GEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 773 ~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
+|+-.|.++||+|.+..|+|||.|++|||||+....++ ..+. |.-.|.||.|.|+ +..||||+.|.
T Consensus 178 ----hh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee--------~vL~GHgwdVksvdWHP~-kgLiasgskDn 244 (464)
T KOG0284|consen 178 ----HHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEE--------RVLRGHGWDVKSVDWHPT-KGLIASGSKDN 244 (464)
T ss_pred ----hhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchh--------heeccCCCCcceeccCCc-cceeEEccCCc
Confidence 35789999999999999999999999999999976332 2233 3456999999995 88999999999
Q ss_pred cEEEEeCCCccc
Q 002843 852 VVKVCMSCRLST 863 (874)
Q Consensus 852 ~V~~WD~~~~~~ 863 (874)
.||+||..++++
T Consensus 245 lVKlWDprSg~c 256 (464)
T KOG0284|consen 245 LVKLWDPRSGSC 256 (464)
T ss_pred eeEeecCCCcch
Confidence 999999998866
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.3e-10 Score=132.30 Aligned_cols=79 Identities=20% Similarity=0.299 Sum_probs=70.7
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
.+|...|.|++++|||+++|||+.|++|||||...+ ..++++. |.+.|+.++|.. .++.|.|+|.||+|+
T Consensus 347 QgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sg--------fC~vTFteHts~Vt~v~f~~-~g~~llssSLDGtVR 417 (893)
T KOG0291|consen 347 QGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSG--------FCFVTFTEHTSGVTAVQFTA-RGNVLLSSSLDGTVR 417 (893)
T ss_pred cccccceeeEEECCCCcEEEeccCCCcEEEEeccCc--------eEEEEeccCCCceEEEEEEe-cCCEEEEeecCCeEE
Confidence 578999999999999999999999999999999986 3455554 789999999998 689999999999999
Q ss_pred EEeCCCccc
Q 002843 855 VCMSCRLST 863 (874)
Q Consensus 855 ~WD~~~~~~ 863 (874)
.||+.+++.
T Consensus 418 AwDlkRYrN 426 (893)
T KOG0291|consen 418 AWDLKRYRN 426 (893)
T ss_pred eeeecccce
Confidence 999998754
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.7e-11 Score=124.82 Aligned_cols=75 Identities=13% Similarity=-0.018 Sum_probs=66.1
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG-VTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~g-IIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
+++|||++|.+|..++.... .+...++..++.||+.+|.+||++| |+||||||+||+++ .+.++|+|||.+....
T Consensus 124 ~lV~E~~~g~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 124 VLVMEFIGGDGLPAPRLKDV-EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred eEEEEEecCCcccccccccC-CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 57999999999987764433 5777788999999999999999999 99999999999999 8899999999987554
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.9e-10 Score=116.45 Aligned_cols=87 Identities=11% Similarity=0.060 Sum_probs=70.1
Q ss_pred CCCeeEEEECCC--CCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEE
Q 002843 779 ANVICSISFDRD--EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVC 856 (874)
Q Consensus 779 ~~~V~si~F~~d--~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~W 856 (874)
++||+|+-|+|. ..+|++||.||++||||++++.-. ...+.|.+-|+.+++|| +++++|||+.||.+.+|
T Consensus 148 ~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~-------~~~~gh~~~v~t~~vSp-DGslcasGgkdg~~~Lw 219 (315)
T KOG0279|consen 148 REWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLR-------TTFIGHSGYVNTVTVSP-DGSLCASGGKDGEAMLW 219 (315)
T ss_pred cCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchh-------hccccccccEEEEEECC-CCCEEecCCCCceEEEE
Confidence 899999999999 668999999999999999986210 01123567799999999 69999999999999999
Q ss_pred eCCCccc--eeeeeeeeee
Q 002843 857 MSCRLST--YCFRKKFVFT 873 (874)
Q Consensus 857 D~~~~~~--~~~~~~f~~~ 873 (874)
|++.++. ..++-.-|||
T Consensus 220 dL~~~k~lysl~a~~~v~s 238 (315)
T KOG0279|consen 220 DLNEGKNLYSLEAFDIVNS 238 (315)
T ss_pred EccCCceeEeccCCCeEee
Confidence 9998766 3444444554
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1e-09 Score=114.86 Aligned_cols=127 Identities=19% Similarity=0.232 Sum_probs=94.5
Q ss_pred hhhhccccCCCCCcccccchhhhhhhhhhhhhccccccCCCCccchhhhhccceeee-eceeEeEEecccCCCCCCCCee
Q 002843 705 SMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARY-SKFEVQGMLRTGEFNNSANVIC 783 (874)
Q Consensus 705 ~~r~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~l~~~~ry-~~~~~~~~l~~~~~~~~~~~V~ 783 (874)
..|+.+-.|.+++++.++=|. ..+-|..+ ..|+++++|. ||-+.|-
T Consensus 63 sVRsvAwsp~g~~La~aSFD~----------------------------t~~Iw~k~~~efecv~~lE-----GHEnEVK 109 (312)
T KOG0645|consen 63 SVRSVAWSPHGRYLASASFDA----------------------------TVVIWKKEDGEFECVATLE-----GHENEVK 109 (312)
T ss_pred eeeeeeecCCCcEEEEeeccc----------------------------eEEEeecCCCceeEEeeee-----cccccee
Confidence 467777788988888887661 11122222 4578888886 3499999
Q ss_pred EEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCC-C--
Q 002843 784 SISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSC-R-- 860 (874)
Q Consensus 784 si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~-~-- 860 (874)
||+|+++|.||||+|-||.+=||++...- ...|-.+.-.|...|..|.|.| ...+|||+|||.||++|+-. -
T Consensus 110 ~Vaws~sG~~LATCSRDKSVWiWe~dedd----Efec~aVL~~HtqDVK~V~WHP-t~dlL~S~SYDnTIk~~~~~~ddd 184 (312)
T KOG0645|consen 110 CVAWSASGNYLATCSRDKSVWIWEIDEDD----EFECIAVLQEHTQDVKHVIWHP-TEDLLFSCSYDNTIKVYRDEDDDD 184 (312)
T ss_pred EEEEcCCCCEEEEeeCCCeEEEEEecCCC----cEEEEeeeccccccccEEEEcC-CcceeEEeccCCeEEEEeecCCCC
Confidence 99999999999999999999999998431 1223333334567799999999 57899999999999999876 2
Q ss_pred ---ccceeeeee
Q 002843 861 ---LSTYCFRKK 869 (874)
Q Consensus 861 ---~~~~~~~~~ 869 (874)
-+++.+|..
T Consensus 185 W~c~~tl~g~~~ 196 (312)
T KOG0645|consen 185 WECVQTLDGHEN 196 (312)
T ss_pred eeEEEEecCccc
Confidence 245777753
|
|
| >KOG0302 consensus Ribosome Assembly protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=7.1e-10 Score=120.16 Aligned_cols=77 Identities=14% Similarity=0.315 Sum_probs=70.3
Q ss_pred CCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEEE
Q 002843 778 SANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKVC 856 (874)
Q Consensus 778 ~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~W 856 (874)
|.+-|+.|+|+++-.+||+||.|++++|||+++. ....|+.++. |++.|+||.|+|+..+.||+++.|..|.||
T Consensus 301 h~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~-----~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiW 375 (440)
T KOG0302|consen 301 HNSDVNVISWNRREPLLASGGDDGTLSIWDLRQF-----KSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIW 375 (440)
T ss_pred cCCceeeEEccCCcceeeecCCCceEEEEEhhhc-----cCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEE
Confidence 4668999999999999999999999999999986 2347888887 668999999999999999999999999999
Q ss_pred eCC
Q 002843 857 MSC 859 (874)
Q Consensus 857 D~~ 859 (874)
|++
T Consensus 376 Dls 378 (440)
T KOG0302|consen 376 DLS 378 (440)
T ss_pred Eee
Confidence 998
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.02 E-value=9.8e-10 Score=123.14 Aligned_cols=95 Identities=20% Similarity=0.363 Sum_probs=75.2
Q ss_pred CccchhhhhccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee
Q 002843 746 DRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM 825 (874)
Q Consensus 746 ~~l~~f~~~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~ 825 (874)
|.+-+|+++- -|+-..+++ .|+.-|+|+.|+|||++|||+|.||+|-|||=.++. .+-++
T Consensus 169 Dn~v~ffeGP-------PFKFk~s~r-----~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge--------~vg~l 228 (603)
T KOG0318|consen 169 DNTVAFFEGP-------PFKFKSSFR-----EHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGE--------KVGEL 228 (603)
T ss_pred CCeEEEeeCC-------Ceeeeeccc-----ccccceeeEEECCCCCeEEEecCCccEEEEcCCCcc--------EEEEe
Confidence 3455566654 233344555 258999999999999999999999999999988872 22233
Q ss_pred ----cCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCc
Q 002843 826 ----SNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 826 ----~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~ 861 (874)
.|.+.|-.|+|+| ++.+++++|.|.++||||+++.
T Consensus 229 ~~~~aHkGsIfalsWsP-Ds~~~~T~SaDkt~KIWdVs~~ 267 (603)
T KOG0318|consen 229 EDSDAHKGSIFALSWSP-DSTQFLTVSADKTIKIWDVSTN 267 (603)
T ss_pred cCCCCccccEEEEEECC-CCceEEEecCCceEEEEEeecc
Confidence 3578899999999 5889999999999999999975
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.2e-09 Score=128.11 Aligned_cols=80 Identities=11% Similarity=0.222 Sum_probs=68.0
Q ss_pred CCCCCCCeeEEEECCCC-CEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCc
Q 002843 775 FNNSANVICSISFDRDE-DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~-~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
+.+|...|.+|+|+|++ .+|||||.|++|+|||+.+. .++..+. |...|.+|+|+| ++++||||+.||+
T Consensus 121 L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg--------~~~~~l~~h~~~V~sla~sp-dG~lLatgs~Dg~ 191 (493)
T PTZ00421 121 LQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERG--------KAVEVIKCHSDQITSLEWNL-DGSLLCTTSKDKK 191 (493)
T ss_pred ecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCC--------eEEEEEcCCCCceEEEEEEC-CCCEEEEecCCCE
Confidence 45679999999999997 58999999999999999975 2344454 557899999999 5889999999999
Q ss_pred EEEEeCCCccc
Q 002843 853 VKVCMSCRLST 863 (874)
Q Consensus 853 V~~WD~~~~~~ 863 (874)
|+|||+.+++.
T Consensus 192 IrIwD~rsg~~ 202 (493)
T PTZ00421 192 LNIIDPRDGTI 202 (493)
T ss_pred EEEEECCCCcE
Confidence 99999987644
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.5e-10 Score=118.65 Aligned_cols=69 Identities=17% Similarity=0.050 Sum_probs=60.6
Q ss_pred ceEeeccCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchh
Q 002843 304 LRQGSSDHG-VNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (874)
Q Consensus 304 ~lvMEy~~G-gsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~ 378 (874)
+++|||++| .+|.+++... .+++. .+.||+.+|.+||++||+||||||.|||++.++.++|+|||.++.
T Consensus 122 ~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 122 DILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred eEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 579999998 7999998754 46654 367899999999999999999999999999989999999998874
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.4e-09 Score=128.64 Aligned_cols=86 Identities=14% Similarity=0.219 Sum_probs=70.5
Q ss_pred CCCCCCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcE
Q 002843 775 FNNSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V 853 (874)
+.+|...|.+|+|+|++.+ |||||.|++|+|||+++.. .+..+.+...|.+++|+| ++++||+++.|++|
T Consensus 121 L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~--------~~~~i~~~~~V~Slswsp-dG~lLat~s~D~~I 191 (568)
T PTZ00420 121 LKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEK--------RAFQINMPKKLSSLKWNI-KGNLLSGTCVGKHM 191 (568)
T ss_pred eecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCc--------EEEEEecCCcEEEEEECC-CCCEEEEEecCCEE
Confidence 3467899999999999986 6899999999999999761 223344567899999999 58899999999999
Q ss_pred EEEeCCCccc---eeeeee
Q 002843 854 KVCMSCRLST---YCFRKK 869 (874)
Q Consensus 854 ~~WD~~~~~~---~~~~~~ 869 (874)
+|||+.+++. +..|.+
T Consensus 192 rIwD~Rsg~~i~tl~gH~g 210 (568)
T PTZ00420 192 HIIDPRKQEIASSFHIHDG 210 (568)
T ss_pred EEEECCCCcEEEEEecccC
Confidence 9999997744 455544
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.1e-09 Score=121.38 Aligned_cols=97 Identities=15% Similarity=0.240 Sum_probs=76.9
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCC--------C-------------------------ccccc
Q 002843 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFND--------S-------------------------VDVYY 820 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~--------~-------------------------~~~~~ 820 (874)
.|..|..+|.+|.|+.+|.||+|||+||+|-|||.-++... + ++...
T Consensus 271 tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~ 350 (524)
T KOG0273|consen 271 TLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDR 350 (524)
T ss_pred hhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCC
Confidence 56678999999999999999999999999999999653111 0 13445
Q ss_pred Ceeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeee
Q 002843 821 PAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFV 871 (874)
Q Consensus 821 p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~ 871 (874)
|+..+. |+.+|++|.||| ...+|||||+|+|++||....... +..|.+-|
T Consensus 351 P~~t~~GH~g~V~alk~n~-tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei 404 (524)
T KOG0273|consen 351 PVKTFIGHHGEVNALKWNP-TGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEI 404 (524)
T ss_pred cceeeecccCceEEEEECC-CCceEEEecCCCeeEeeecCCCcchhhhhhhccce
Confidence 777765 678999999999 478999999999999999875422 55555443
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.9e-10 Score=120.56 Aligned_cols=85 Identities=19% Similarity=0.251 Sum_probs=72.5
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeee--ecCCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE--MSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~--~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
+..+.|-|..|+|||+||+|||+|+-|.|||+.++. -..|..|.... |.+...|.|++|+. +...||||+.||.|+
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GK-lrKDLkYQAqd~fMMmd~aVlci~FSR-DsEMlAsGsqDGkIK 288 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGK-LRKDLKYQAQDNFMMMDDAVLCISFSR-DSEMLASGSQDGKIK 288 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccch-hhhhhhhhhhcceeecccceEEEeecc-cHHHhhccCcCCcEE
Confidence 446788999999999999999999999999999872 22344555544 66788999999998 688999999999999
Q ss_pred EEeCCCccc
Q 002843 855 VCMSCRLST 863 (874)
Q Consensus 855 ~WD~~~~~~ 863 (874)
||-+.+|++
T Consensus 289 vWri~tG~C 297 (508)
T KOG0275|consen 289 VWRIETGQC 297 (508)
T ss_pred EEEEecchH
Confidence 999999977
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.6e-10 Score=115.07 Aligned_cols=70 Identities=13% Similarity=-0.037 Sum_probs=61.3
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
+++|||++|++|..++.. .....++.+|+.++.++|..||+||||||+||+++.++.++|+|||++....
T Consensus 107 ~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 107 AVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred eEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 679999999999876431 3456789999999999999999999999999999999999999999986444
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=98.97 E-value=8.4e-10 Score=122.14 Aligned_cols=96 Identities=18% Similarity=0.316 Sum_probs=78.8
Q ss_pred cCCCCCCCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCCCCcccccCeee-ecCCCceeEEEEeCCCCCEEEEeeCC
Q 002843 773 GEFNNSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVE-MSNRSKLSCVCWNNYIKNYLASADYD 850 (874)
Q Consensus 773 ~~~~~~~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~-~~~~~~v~~l~wnp~~~~~laS~~~D 850 (874)
..+.+|++.|..++|++-.+. ||++|.|+++.|||.++... .|... -.|.++|.||+|||++..+||+||.|
T Consensus 221 ~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~------~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D 294 (422)
T KOG0264|consen 221 TIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTS------KPSHSVKAHSAEVNCVAFNPFNEFILATGSAD 294 (422)
T ss_pred EEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCC------CCcccccccCCceeEEEeCCCCCceEEeccCC
Confidence 345678999999999999885 99999999999999996211 22222 24678999999999999999999999
Q ss_pred CcEEEEeCCCccc----eeeeeeeeeeC
Q 002843 851 GVVKVCMSCRLST----YCFRKKFVFTL 874 (874)
Q Consensus 851 g~V~~WD~~~~~~----~~~~~~f~~~~ 874 (874)
++|.|||+.+.+. +++|...|+.|
T Consensus 295 ~tV~LwDlRnL~~~lh~~e~H~dev~~V 322 (422)
T KOG0264|consen 295 KTVALWDLRNLNKPLHTFEGHEDEVFQV 322 (422)
T ss_pred CcEEEeechhcccCceeccCCCcceEEE
Confidence 9999999997533 78888877753
|
|
| >KOG0270 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.2e-10 Score=124.05 Aligned_cols=77 Identities=19% Similarity=0.424 Sum_probs=70.9
Q ss_pred CCCCCCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCCCCcccccCeeeecCC-CceeEEEEeCCCCCEEEEeeCCCc
Q 002843 775 FNNSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR-SKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~-~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
..+|++.|.+++|+..-+. |||||.|+|||+||+.++ .|...|.++ .+|++|+|+|+.+.+|.||+|||+
T Consensus 239 ~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g--------~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~ 310 (463)
T KOG0270|consen 239 ASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTG--------KPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGT 310 (463)
T ss_pred cccchHHHHHHHhccccceeEEecCCCceEEEEEcCCC--------CcceehhhcCCceeEEEecCCCceEEEeccccce
Confidence 4579999999999999996 999999999999999998 677777744 689999999999999999999999
Q ss_pred EEEEeCC
Q 002843 853 VKVCMSC 859 (874)
Q Consensus 853 V~~WD~~ 859 (874)
|.|.|..
T Consensus 311 V~l~D~R 317 (463)
T KOG0270|consen 311 VALKDCR 317 (463)
T ss_pred EEeeecc
Confidence 9999998
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.9e-09 Score=116.56 Aligned_cols=103 Identities=16% Similarity=0.186 Sum_probs=81.4
Q ss_pred eeEeEEec-ccCCCCCCCCeeEEEECCCC---------------CEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecC
Q 002843 764 FEVQGMLR-TGEFNNSANVICSISFDRDE---------------DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSN 827 (874)
Q Consensus 764 ~~~~~~l~-~~~~~~~~~~V~si~F~~d~---------------~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~ 827 (874)
.+++|+-. -..+..|-.+|-+|+|-|+. .++++||.||+||+||+.++. |-+....|
T Consensus 261 vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~-------cL~tL~gh 333 (406)
T KOG0295|consen 261 VWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGM-------CLFTLVGH 333 (406)
T ss_pred EEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCe-------EEEEEecc
Confidence 34444432 12344568899999998763 478999999999999999872 33333456
Q ss_pred CCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeeeeC
Q 002843 828 RSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFVFTL 874 (874)
Q Consensus 828 ~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~~~ 874 (874)
.+.|..++|+| ++.+|+|+..|+++++||+.++|+ ++-|..||+++
T Consensus 334 dnwVr~~af~p-~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~l 382 (406)
T KOG0295|consen 334 DNWVRGVAFSP-GGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSL 382 (406)
T ss_pred cceeeeeEEcC-CCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEE
Confidence 68899999999 577999999999999999999876 88999999875
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=6.4e-10 Score=119.62 Aligned_cols=184 Identities=17% Similarity=0.133 Sum_probs=124.8
Q ss_pred eEeeccCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC--CCcccCCCCCceEEecCCcEEEeccccchhc
Q 002843 305 RQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQ--GVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (874)
Q Consensus 305 lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I~~QIl~aL~yLHs~--gIIHRDLKPsNILL~~~~~vKLiDFGlar~~ 379 (874)
.+.|||.-|+|.++|++ .+..+......+|+.||+.||.|||+. -|+|+++...-|++.++|-+|+ |.+.....
T Consensus 149 Fiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIki-g~~ap~s~ 227 (458)
T KOG1266|consen 149 FITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKI-GSVAPDST 227 (458)
T ss_pred EEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEe-cccCcccc
Confidence 47999999999999975 334788899999999999999999998 4999999999999999888886 22211100
Q ss_pred cccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCc
Q 002843 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (874)
Q Consensus 380 ~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~ 459 (874)
. ..+..
T Consensus 228 h-----------~s~~~--------------------------------------------------------------- 233 (458)
T KOG1266|consen 228 H-----------PSVNS--------------------------------------------------------------- 233 (458)
T ss_pred c-----------hhhhh---------------------------------------------------------------
Confidence 0 00000
Q ss_pred ccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCC--chHHHHH
Q 002843 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFD--SERALAA 537 (874)
Q Consensus 460 ~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~--p~~~~~~ 537 (874)
+.+. -+ ....+-++|.|||.-..-..+.++|||+||+...||.-+-. .......
T Consensus 234 -------------------~~~~---Ek--~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~ 289 (458)
T KOG1266|consen 234 -------------------TREA---EK--SVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKV 289 (458)
T ss_pred -------------------hhHh---hh--hccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCccee
Confidence 0000 00 12234568999997555556789999999999999876621 1111100
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 538 AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 538 ~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.. ...+-.-.+....+.-++++.+||..+|..||+|.++|.||.+=++..
T Consensus 290 ~~---ee~ia~~i~~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVhs 339 (458)
T KOG1266|consen 290 EV---EENIANVIIGLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVHS 339 (458)
T ss_pred eh---hhhhhhheeeccCccccCcCcccccCCCCCCcchhhhhcCceeeecch
Confidence 00 001111223344455668999999999999999999999998665443
|
|
| >KOG0302 consensus Ribosome Assembly protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.9e-09 Score=116.96 Aligned_cols=95 Identities=20% Similarity=0.365 Sum_probs=77.0
Q ss_pred ccCCCCCCCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCCCEEEEeeC
Q 002843 772 TGEFNNSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIKNYLASADY 849 (874)
Q Consensus 772 ~~~~~~~~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~ 849 (874)
...+.+|+..|-.|.|||..+- |||||.|++|+|||+++. -+.+.+.. .|.+.|+-|+||-. -+.||||+.
T Consensus 250 ~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~------~~~~~~~~kAh~sDVNVISWnr~-~~lLasG~D 322 (440)
T KOG0302|consen 250 QRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSG------PKKAAVSTKAHNSDVNVISWNRR-EPLLASGGD 322 (440)
T ss_pred CccccccccchhhhccCCccCceEEeeecCceEEEEEecCC------CccceeEeeccCCceeeEEccCC-cceeeecCC
Confidence 3567889999999999999885 999999999999999986 23444444 46788999999985 449999999
Q ss_pred CCcEEEEeCCCcc------ceeeeeeeeee
Q 002843 850 DGVVKVCMSCRLS------TYCFRKKFVFT 873 (874)
Q Consensus 850 Dg~V~~WD~~~~~------~~~~~~~f~~~ 873 (874)
||+++|||+...+ .|+-|+.=|-|
T Consensus 323 dGt~~iwDLR~~~~~~pVA~fk~Hk~pIts 352 (440)
T KOG0302|consen 323 DGTLSIWDLRQFKSGQPVATFKYHKAPITS 352 (440)
T ss_pred CceEEEEEhhhccCCCcceeEEeccCCeeE
Confidence 9999999998632 26666665544
|
|
| >KOG0269 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.6e-09 Score=126.10 Aligned_cols=90 Identities=17% Similarity=0.236 Sum_probs=76.5
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeC--CCc
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY--DGV 852 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~--Dg~ 852 (874)
+..|.++|.|+.|+|++.+|||||-||+|||||+.+.. ..|..++.+-+.|.+|.|-|....+|||++. |-.
T Consensus 216 ~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~------~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dts 289 (839)
T KOG0269|consen 216 LTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSR------AKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTS 289 (839)
T ss_pred hhcccCceEEEeecCCCceeeecCCCccEEEEeccCCC------ccceeEEeecceeeeeeeccCccchhhhhhccccce
Confidence 45689999999999999999999999999999999642 2566677788899999999999999999998 789
Q ss_pred EEEEeCCCc----cceeeeeee
Q 002843 853 VKVCMSCRL----STYCFRKKF 870 (874)
Q Consensus 853 V~~WD~~~~----~~~~~~~~f 870 (874)
|.|||+.|. ..+.+|+.-
T Consensus 290 V~VWDvrRPYIP~~t~~eH~~~ 311 (839)
T KOG0269|consen 290 VHVWDVRRPYIPYATFLEHTDS 311 (839)
T ss_pred EEEEeeccccccceeeeccCcc
Confidence 999999974 336665543
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.9e-09 Score=114.78 Aligned_cols=90 Identities=12% Similarity=0.171 Sum_probs=75.9
Q ss_pred cCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCC
Q 002843 773 GEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 773 ~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
++++||-+.|+||+.+|.-+.|+|||.|-+|||||+++- .++..|. |...|.+|.++|. ..++.|||.|+
T Consensus 229 R~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr--------~~V~~l~GH~~~V~~V~~~~~-dpqvit~S~D~ 299 (460)
T KOG0285|consen 229 RHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTR--------ASVHVLSGHTNPVASVMCQPT-DPQVITGSHDS 299 (460)
T ss_pred HHhccccceeEEEeccccceeEEecCCcceEEEeeeccc--------ceEEEecCCCCcceeEEeecC-CCceEEecCCc
Confidence 346789999999999999999999999999999999985 4566676 6688999999996 55899999999
Q ss_pred cEEEEeCCCccc---eeeeeeee
Q 002843 852 VVKVCMSCRLST---YCFRKKFV 871 (874)
Q Consensus 852 ~V~~WD~~~~~~---~~~~~~f~ 871 (874)
+|++||+..+++ ++-|+.=|
T Consensus 300 tvrlWDl~agkt~~tlt~hkksv 322 (460)
T KOG0285|consen 300 TVRLWDLRAGKTMITLTHHKKSV 322 (460)
T ss_pred eEEEeeeccCceeEeeeccccee
Confidence 999999997755 44454433
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.1e-09 Score=120.07 Aligned_cols=107 Identities=18% Similarity=0.216 Sum_probs=83.9
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCC-EEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCce
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKL 831 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~-~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v 831 (874)
-|.|.|-|.+-.-.+- .+.||++-|.+|+|+|.+. .||||+-|+|||||.+... | |.-++ .|...|
T Consensus 119 m~iKlW~we~~wa~~q----tfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~-------~-~nfTl~gHekGV 186 (794)
T KOG0276|consen 119 MTIKLWDWENEWACEQ----TFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSP-------H-PNFTLEGHEKGV 186 (794)
T ss_pred cEEEEeeccCceeeee----EEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCC-------C-CceeeeccccCc
Confidence 4678888876554432 3567899999999999776 5999999999999999865 2 33333 456789
Q ss_pred eEEEEeCC-CCCEEEEeeCCCcEEEEeCCCc---cceeeeeeeee
Q 002843 832 SCVCWNNY-IKNYLASADYDGVVKVCMSCRL---STYCFRKKFVF 872 (874)
Q Consensus 832 ~~l~wnp~-~~~~laS~~~Dg~V~~WD~~~~---~~~~~~~~f~~ 872 (874)
+||++-|- +|++|.||+.|.+|||||..+. |++++|+-=|+
T Consensus 187 N~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs 231 (794)
T KOG0276|consen 187 NCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVS 231 (794)
T ss_pred ceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccce
Confidence 99999764 5789999999999999999986 44888875443
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=98.88 E-value=8.9e-10 Score=122.59 Aligned_cols=93 Identities=14% Similarity=0.134 Sum_probs=78.3
Q ss_pred cCCCCCCCCeeEEEECC-CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeee-ecCCCceeEEEEeCCCCCEEEEeeCC
Q 002843 773 GEFNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE-MSNRSKLSCVCWNNYIKNYLASADYD 850 (874)
Q Consensus 773 ~~~~~~~~~V~si~F~~-d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~-~~~~~~v~~l~wnp~~~~~laS~~~D 850 (874)
-.+.||+..|++|-|.| .+.+|++||.|.+|||||+..- .+| ++. +.|...|..++||+ ++..+.|++||
T Consensus 208 ~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~------~~~-lrtf~gH~k~Vrd~~~s~-~g~~fLS~sfD 279 (503)
T KOG0282|consen 208 HNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDD------RRC-LRTFKGHRKPVRDASFNN-CGTSFLSASFD 279 (503)
T ss_pred eeccCCccccchhhhccceeeEEEecCCCceEEEEEEecC------cce-ehhhhcchhhhhhhhccc-cCCeeeeeecc
Confidence 35667899999999999 8889999999999999999862 222 334 34556799999998 58899999999
Q ss_pred CcEEEEeCCCccc-eeeeeeeeee
Q 002843 851 GVVKVCMSCRLST-YCFRKKFVFT 873 (874)
Q Consensus 851 g~V~~WD~~~~~~-~~~~~~f~~~ 873 (874)
+.|++||+.||+. .++++++|-+
T Consensus 280 ~~lKlwDtETG~~~~~f~~~~~~~ 303 (503)
T KOG0282|consen 280 RFLKLWDTETGQVLSRFHLDKVPT 303 (503)
T ss_pred eeeeeeccccceEEEEEecCCCce
Confidence 9999999999977 7888877754
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.1e-09 Score=125.00 Aligned_cols=100 Identities=20% Similarity=0.324 Sum_probs=79.6
Q ss_pred cCCC-CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCC---------------------------CCCC-----C----
Q 002843 773 GEFN-NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNA---------------------------LFND-----S---- 815 (874)
Q Consensus 773 ~~~~-~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~---------------------------~~~~-----~---- 815 (874)
.++. .|.+.|.++.||+||+||||||.|+.|+||-+-. .... .
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 4555 6899999999999999999999999999998866 0000 0
Q ss_pred --------c--------ccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc--eeeeeeeeeeC
Q 002843 816 --------V--------DVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST--YCFRKKFVFTL 874 (874)
Q Consensus 816 --------~--------~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~--~~~~~~f~~~~ 874 (874)
+ -.-.|+.++. |.+.|..|+||. .+.|.|+|.|+||+||++.+..+ ...|..||-++
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcV 415 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCV 415 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheeccccc--CCeeEeccccccEEeecCCCcceeeEEecCCeeEEE
Confidence 0 0123777765 557899999997 67999999999999999998766 77888888653
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.2e-09 Score=108.41 Aligned_cols=89 Identities=13% Similarity=0.148 Sum_probs=72.8
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEE
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKV 855 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~ 855 (874)
-+|.+-|.+|.|..||+...|||.|+++||||+++.. .-+++.+.+.|++|+-+| ++..|.||+.+|.|+|
T Consensus 80 e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~--------~qR~~~~~spVn~vvlhp-nQteLis~dqsg~irv 150 (311)
T KOG0315|consen 80 EGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLS--------CQRNYQHNSPVNTVVLHP-NQTELISGDQSGNIRV 150 (311)
T ss_pred eccCCceEEEEEeecCeEEEecCCCceEEEEeccCcc--------cchhccCCCCcceEEecC-CcceEEeecCCCcEEE
Confidence 3468899999999999999999999999999999852 223456678999999999 5889999999999999
Q ss_pred EeCCCc----cceeeeeeeeee
Q 002843 856 CMSCRL----STYCFRKKFVFT 873 (874)
Q Consensus 856 WD~~~~----~~~~~~~~f~~~ 873 (874)
||+... +.+++..-||-|
T Consensus 151 WDl~~~~c~~~liPe~~~~i~s 172 (311)
T KOG0315|consen 151 WDLGENSCTHELIPEDDTSIQS 172 (311)
T ss_pred EEccCCccccccCCCCCcceee
Confidence 999864 225555555544
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.2e-09 Score=120.19 Aligned_cols=96 Identities=18% Similarity=0.241 Sum_probs=82.5
Q ss_pred hhccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCce
Q 002843 753 DGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKL 831 (874)
Q Consensus 753 ~~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v 831 (874)
+.++|.|++..+++.++|+ ||+-.|-||.|+|..+.+||+|.|+|||||.+.+. ..+.++. |.+.|
T Consensus 484 DktaKiW~le~~~l~~vLs-----GH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~f--------SClkT~eGH~~aV 550 (775)
T KOG0319|consen 484 DKTAKIWDLEQLRLLGVLS-----GHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTF--------SCLKTFEGHTSAV 550 (775)
T ss_pred ccceeeecccCceEEEEee-----CCccceEEEEeccccceeEeccCCceEEEEEeccc--------eeeeeecCcccee
Confidence 3678999999888888886 35999999999999999999999999999999987 2334444 56789
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 832 SCVCWNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 832 ~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
..++|-. ++.+|.||+.||.||||++.+..
T Consensus 551 lra~F~~-~~~qliS~~adGliKlWnikt~e 580 (775)
T KOG0319|consen 551 LRASFIR-NGKQLISAGADGLIKLWNIKTNE 580 (775)
T ss_pred Eeeeeee-CCcEEEeccCCCcEEEEeccchh
Confidence 9999987 57799999999999999999763
|
|
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.3e-09 Score=113.63 Aligned_cols=97 Identities=18% Similarity=0.190 Sum_probs=78.4
Q ss_pred ccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeee-ecCCCceeE
Q 002843 755 LCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE-MSNRSKLSC 833 (874)
Q Consensus 755 l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~-~~~~~~v~~ 833 (874)
.+|-|-......+-++.. ...++||+.+|...+||+||.|+.|+|||.++. ++..+... +.|.+-|+.
T Consensus 282 TIk~WDletg~~~~~~~~------~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~-----~gs~v~~s~~gH~nwVss 350 (423)
T KOG0313|consen 282 TIKVWDLETGGLKSTLTT------NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTG-----DGSVVSQSLIGHKNWVSS 350 (423)
T ss_pred eEEEEEeecccceeeeec------CcceeEeecccccceeeecCCCCceeecCCCCC-----CCceeEEeeecchhhhhh
Confidence 345555555566666654 677899999999999999999999999999987 23333334 356788999
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 834 VCWNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 834 l~wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
|.|+|.+..+|+|++||++|++||+..-.
T Consensus 351 vkwsp~~~~~~~S~S~D~t~klWDvRS~k 379 (423)
T KOG0313|consen 351 VKWSPTNEFQLVSGSYDNTVKLWDVRSTK 379 (423)
T ss_pred eecCCCCceEEEEEecCCeEEEEEeccCC
Confidence 99999999999999999999999998654
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.7e-09 Score=107.26 Aligned_cols=74 Identities=15% Similarity=-0.028 Sum_probs=60.1
Q ss_pred CceEeeccCCCCHHHH-HHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 303 GLRQGSSDHGVNLREW-LNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~-L~~~~~~lse~e~~~I~~QIl~aL~yLHs-~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
.+++|||++|+++... +.... . ..++..++.+++.++.++|. +||+||||||+||+++ ++.++++|||.+....
T Consensus 90 ~~lv~e~~~g~~~~~~~l~~~~--~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 90 HVLVMEFIGGDGIPAPRLKDVR--L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred CEEEEEEeCCCCccChhhhhhh--h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECccccccc
Confidence 4789999999544321 22111 1 16788999999999999999 9999999999999999 8999999999997654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.84 E-value=5.9e-09 Score=120.90 Aligned_cols=88 Identities=18% Similarity=0.251 Sum_probs=72.7
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
..|-.-|+||+.+|+.++|||||.||+.|||++..+ .-+..++ |+-.|-||.|+|+ ...||+||.|+|||
T Consensus 460 ~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~--------~l~~vLsGH~RGvw~V~Fs~~-dq~laT~SgD~TvK 530 (775)
T KOG0319|consen 460 RAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQL--------RLLGVLSGHTRGVWCVSFSKN-DQLLATCSGDKTVK 530 (775)
T ss_pred HhhcccccceEecCCCceEEecccccceeeecccCc--------eEEEEeeCCccceEEEEeccc-cceeEeccCCceEE
Confidence 346889999999999999999999999999999954 1123344 4567999999996 55999999999999
Q ss_pred EEeCCCc---cceeeeeeeee
Q 002843 855 VCMSCRL---STYCFRKKFVF 872 (874)
Q Consensus 855 ~WD~~~~---~~~~~~~~f~~ 872 (874)
||-++++ +++++|+.-|.
T Consensus 531 IW~is~fSClkT~eGH~~aVl 551 (775)
T KOG0319|consen 531 IWSISTFSCLKTFEGHTSAVL 551 (775)
T ss_pred EEEeccceeeeeecCccceeE
Confidence 9999987 44887876553
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.83 E-value=6.1e-09 Score=116.18 Aligned_cols=79 Identities=15% Similarity=0.301 Sum_probs=69.3
Q ss_pred CCCCCCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCc
Q 002843 775 FNNSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
+..|+.+|..+-|+|++.. |++||.|+.+|+||+.+. +-..++. |.+-|.|.+|+|...++++||+|||+
T Consensus 106 ~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a--------~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~ 177 (487)
T KOG0310|consen 106 LYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA--------YVQAELSGHTDYVRCGDISPANDHIVVTGSYDGK 177 (487)
T ss_pred HhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc--------EEEEEecCCcceeEeeccccCCCeEEEecCCCce
Confidence 5578999999999999986 999999999999999986 3233554 66889999999999999999999999
Q ss_pred EEEEeCCCc
Q 002843 853 VKVCMSCRL 861 (874)
Q Consensus 853 V~~WD~~~~ 861 (874)
|++||+...
T Consensus 178 vrl~DtR~~ 186 (487)
T KOG0310|consen 178 VRLWDTRSL 186 (487)
T ss_pred EEEEEeccC
Confidence 999999864
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.83 E-value=6.8e-09 Score=120.47 Aligned_cols=127 Identities=12% Similarity=0.110 Sum_probs=96.2
Q ss_pred HHHHHHhhhhhccccCCCCCcccccchhhhhhhhhhhhhccccccCCCCccchhhhhccceeeeeceeEeEEecccCCCC
Q 002843 698 QLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNN 777 (874)
Q Consensus 698 ~l~~~y~~~r~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~l~~~~ry~~~~~~~~l~~~~~~~ 777 (874)
+.|++|+++-+..++||++.++.+..| +=.|.|.-.+.-++.|.. -
T Consensus 345 KQQgH~~~i~~l~YSpDgq~iaTG~eD-----------------------------gKVKvWn~~SgfC~vTFt-----e 390 (893)
T KOG0291|consen 345 KQQGHSDRITSLAYSPDGQLIATGAED-----------------------------GKVKVWNTQSGFCFVTFT-----E 390 (893)
T ss_pred eccccccceeeEEECCCCcEEEeccCC-----------------------------CcEEEEeccCceEEEEec-----c
Confidence 358889999999999999888888777 112455444455676665 2
Q ss_pred CCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCC-CCc-------------c-----------------------ccc
Q 002843 778 SANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFN-DSV-------------D-----------------------VYY 820 (874)
Q Consensus 778 ~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~-~~~-------------~-----------------------~~~ 820 (874)
|++.|.++.|+..|..+.++|-|++|+.||+....+ .+. | ++
T Consensus 391 Hts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGq- 469 (893)
T KOG0291|consen 391 HTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQ- 469 (893)
T ss_pred CCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCe-
Confidence 499999999999999999999999999999875321 110 1 11
Q ss_pred Ceeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCC
Q 002843 821 PAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCR 860 (874)
Q Consensus 821 p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~ 860 (874)
-+..++ |.+.|++|+||| +++.|||||+|+||++||+-.
T Consensus 470 llDiLsGHEgPVs~l~f~~-~~~~LaS~SWDkTVRiW~if~ 509 (893)
T KOG0291|consen 470 LLDILSGHEGPVSGLSFSP-DGSLLASGSWDKTVRIWDIFS 509 (893)
T ss_pred eeehhcCCCCcceeeEEcc-ccCeEEeccccceEEEEEeec
Confidence 112233 557899999999 588999999999999999964
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.2e-08 Score=116.32 Aligned_cols=108 Identities=19% Similarity=0.088 Sum_probs=87.3
Q ss_pred cceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEE
Q 002843 756 CKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVC 835 (874)
Q Consensus 756 ~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~ 835 (874)
++.-.|.+++-+.+.. .|++-|+||+-+|...|+.|+|.|-+||+||....- .|....-.|..-|.+|+
T Consensus 79 IrVfnynt~ekV~~Fe-----AH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~w------a~~qtfeGH~HyVMqv~ 147 (794)
T KOG0276|consen 79 IRVFNYNTGEKVKTFE-----AHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEW------ACEQTFEGHEHYVMQVA 147 (794)
T ss_pred EEEEecccceeeEEee-----ccccceeeeeecCCCCeEEecCCccEEEEeeccCce------eeeeEEcCcceEEEEEE
Confidence 3566788888888776 248899999999999999999999999999999751 12111123456799999
Q ss_pred EeCCCCCEEEEeeCCCcEEEEeCCCc---cceeeeeeeeeeC
Q 002843 836 WNNYIKNYLASADYDGVVKVCMSCRL---STYCFRKKFVFTL 874 (874)
Q Consensus 836 wnp~~~~~laS~~~Dg~V~~WD~~~~---~~~~~~~~f~~~~ 874 (874)
|||.+.+.+||||-|+|||||.+... .++++|.+=||.+
T Consensus 148 fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~V 189 (794)
T KOG0276|consen 148 FNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCV 189 (794)
T ss_pred ecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceE
Confidence 99999999999999999999999865 4488888777753
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=98.82 E-value=6.9e-09 Score=115.23 Aligned_cols=92 Identities=15% Similarity=0.118 Sum_probs=66.1
Q ss_pred ccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCC-CCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCC
Q 002843 772 TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNAL-FNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD 850 (874)
Q Consensus 772 ~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~-~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~D 850 (874)
-+.+.||.+.|++|.|+|.|.+|||||.|.|+|||..... +.+...+|..-.--.-.+..-++.|||.....|||++.|
T Consensus 352 ~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~d 431 (524)
T KOG0273|consen 352 VKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFD 431 (524)
T ss_pred ceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecC
Confidence 3567789999999999999999999999999999997754 212222221000000122344555555556799999999
Q ss_pred CcEEEEeCCCccc
Q 002843 851 GVVKVCMSCRLST 863 (874)
Q Consensus 851 g~V~~WD~~~~~~ 863 (874)
++|++||+.++++
T Consensus 432 stV~lwdv~~gv~ 444 (524)
T KOG0273|consen 432 STVKLWDVESGVP 444 (524)
T ss_pred CeEEEEEccCCce
Confidence 9999999999866
|
|
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.4e-09 Score=115.96 Aligned_cols=64 Identities=23% Similarity=0.349 Sum_probs=57.8
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCc-eeEEEEeCCCCCEEEEeeCCCcEEEEeCCC
Q 002843 789 RDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSK-LSCVCWNNYIKNYLASADYDGVVKVCMSCR 860 (874)
Q Consensus 789 ~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~-v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~ 860 (874)
-+..++||||.|.+|.||+-.++ .|+.++.+|++ |+||+|||.++..+|||+.||||+||-...
T Consensus 450 ~~~~fiaSGSED~kvyIWhr~sg--------kll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 450 GNDKFIASGSEDSKVYIWHRISG--------KLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred CCcceEEecCCCceEEEEEccCC--------ceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 45579999999999999999987 68888887764 999999999999999999999999998774
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.3e-08 Score=124.31 Aligned_cols=88 Identities=17% Similarity=0.165 Sum_probs=71.2
Q ss_pred CCCCCCeeEEEECC-CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 776 NNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 776 ~~~~~~V~si~F~~-d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
.+|...|.+|+|+| ++.+|||||.|++|+|||+++. ..+..+.++..|.|++|++..+.+||+|+.||+|+
T Consensus 572 ~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~--------~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~ 643 (793)
T PLN00181 572 KEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG--------VSIGTIKTKANICCVQFPSESGRSLAFGSADHKVY 643 (793)
T ss_pred cCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCC--------cEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeEE
Confidence 45789999999997 7899999999999999999875 23344555678999999887889999999999999
Q ss_pred EEeCCCcc----ceeeeeeee
Q 002843 855 VCMSCRLS----TYCFRKKFV 871 (874)
Q Consensus 855 ~WD~~~~~----~~~~~~~f~ 871 (874)
+||+...+ .+..|..-|
T Consensus 644 iwD~~~~~~~~~~~~~h~~~V 664 (793)
T PLN00181 644 YYDLRNPKLPLCTMIGHSKTV 664 (793)
T ss_pred EEECCCCCccceEecCCCCCE
Confidence 99998643 244454444
|
|
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.1e-08 Score=105.25 Aligned_cols=91 Identities=11% Similarity=0.069 Sum_probs=76.7
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecC-CCceeEEEEeCCCCCEEEEeeCCCcE
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSN-RSKLSCVCWNNYIKNYLASADYDGVV 853 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~-~~~v~~l~wnp~~~~~laS~~~Dg~V 853 (874)
+-.+.++|+++-|+.||+|..|+|.||+||+|++-.+ .-+.+.++ ...|..++-+. +...+|||+.|+.|
T Consensus 13 l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg--------~liktYsghG~EVlD~~~s~-Dnskf~s~GgDk~v 83 (307)
T KOG0316|consen 13 LDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRG--------ALIKTYSGHGHEVLDAALSS-DNSKFASCGGDKAV 83 (307)
T ss_pred ecccccceEEEEEccCCCEEEEcCCCceEEeeccccc--------ceeeeecCCCceeeeccccc-cccccccCCCCceE
Confidence 3456899999999999999999999999999999876 22334443 45788888885 67799999999999
Q ss_pred EEEeCCCccc---eeeeeeeeeeC
Q 002843 854 KVCMSCRLST---YCFRKKFVFTL 874 (874)
Q Consensus 854 ~~WD~~~~~~---~~~~~~f~~~~ 874 (874)
.+||+++|+. +.+|.+-||++
T Consensus 84 ~vwDV~TGkv~Rr~rgH~aqVNtV 107 (307)
T KOG0316|consen 84 QVWDVNTGKVDRRFRGHLAQVNTV 107 (307)
T ss_pred EEEEcccCeeeeecccccceeeEE
Confidence 9999999855 89999999975
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.77 E-value=9.2e-09 Score=121.13 Aligned_cols=80 Identities=18% Similarity=0.328 Sum_probs=71.0
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcE
Q 002843 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V 853 (874)
.+.||+.-|..|+||.++ ||.|+|+|||+|||++..- +.+..+.|.+-|+||+|||-+.++++|||-||.|
T Consensus 364 ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~--------~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~Kv 434 (712)
T KOG0283|consen 364 EFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRK--------ECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKV 434 (712)
T ss_pred hhhccchhheecccccCC-eeEeccccccEEeecCCCc--------ceeeEEecCCeeEEEEecccCCCcEeecccccce
Confidence 355679999999999764 7889999999999999864 5677888999999999999999999999999999
Q ss_pred EEEeCCCcc
Q 002843 854 KVCMSCRLS 862 (874)
Q Consensus 854 ~~WD~~~~~ 862 (874)
+||++...+
T Consensus 435 RiWsI~d~~ 443 (712)
T KOG0283|consen 435 RLWSISDKK 443 (712)
T ss_pred EEeecCcCe
Confidence 999998644
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=98.75 E-value=9.1e-09 Score=114.69 Aligned_cols=113 Identities=14% Similarity=0.123 Sum_probs=87.6
Q ss_pred cchhhhhccceeeeec-eeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec
Q 002843 748 LGAFFDGLCKYARYSK-FEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS 826 (874)
Q Consensus 748 l~~f~~~l~~~~ry~~-~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~ 826 (874)
|-.+.+++.+.|.... .+++ .++.||+-+|.++.|+.+|..|.|||.|+.||+||.+|+. -+..+.
T Consensus 231 LS~gmD~~vklW~vy~~~~~l-----rtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~--------~~~~f~ 297 (503)
T KOG0282|consen 231 LSGGMDGLVKLWNVYDDRRCL-----RTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQ--------VLSRFH 297 (503)
T ss_pred EecCCCceEEEEEEecCccee-----hhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccce--------EEEEEe
Confidence 4455556666654332 3333 4577889999999999999999999999999999999982 233344
Q ss_pred CCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCc---cceeeeeeeeee
Q 002843 827 NRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRL---STYCFRKKFVFT 873 (874)
Q Consensus 827 ~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~---~~~~~~~~f~~~ 873 (874)
...-+.||.|+|.+.+++.+|..|+.|+.||+.++ |.|-.|++-|++
T Consensus 298 ~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~ 347 (503)
T KOG0282|consen 298 LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILD 347 (503)
T ss_pred cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheee
Confidence 45567899999998899999999999999999976 336666666554
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.6e-08 Score=110.68 Aligned_cols=92 Identities=20% Similarity=0.165 Sum_probs=77.6
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
+.||.--|.||+|+|.-.++||||.|..||+||.+++. |-.....|+..|..|.|||+ +++|+++|.|..++
T Consensus 218 L~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~-------cl~tlh~HKntVl~~~f~~n-~N~Llt~skD~~~k 289 (464)
T KOG0284|consen 218 LRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGS-------CLATLHGHKNTVLAVKFNPN-GNWLLTGSKDQSCK 289 (464)
T ss_pred eccCCCCcceeccCCccceeEEccCCceeEeecCCCcc-------hhhhhhhccceEEEEEEcCC-CCeeEEccCCceEE
Confidence 45678889999999999999999999999999999872 22222245677999999995 79999999999999
Q ss_pred EEeCCC---ccceeeeeeeeeeC
Q 002843 855 VCMSCR---LSTYCFRKKFVFTL 874 (874)
Q Consensus 855 ~WD~~~---~~~~~~~~~f~~~~ 874 (874)
|.|+.+ .++++.|++||.++
T Consensus 290 v~DiR~mkEl~~~r~Hkkdv~~~ 312 (464)
T KOG0284|consen 290 VFDIRTMKELFTYRGHKKDVTSL 312 (464)
T ss_pred EEehhHhHHHHHhhcchhhheee
Confidence 999995 36689999999874
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.7e-08 Score=103.25 Aligned_cols=95 Identities=16% Similarity=0.150 Sum_probs=72.1
Q ss_pred ceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCC
Q 002843 763 KFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKN 842 (874)
Q Consensus 763 ~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~ 842 (874)
.|.++..++ .|..-|..+-||||++||||+|.||++|||+.++.+.. -.+.-.|..-+-..+||- ++.
T Consensus 204 ~l~P~~k~~-----ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kl------e~~l~gh~rWvWdc~FS~-dg~ 271 (311)
T KOG0315|consen 204 ELEPVHKFQ-----AHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKL------ELVLTGHQRWVWDCAFSA-DGE 271 (311)
T ss_pred cceEhhhee-----cccceEEEEEECCCCcEEEeecCCceEEEEecCCceee------EEEeecCCceEEeeeecc-Ccc
Confidence 344554444 35888999999999999999999999999999976211 111112345678899998 689
Q ss_pred EEEEeeCCCcEEEEeCCCccc---eeeeee
Q 002843 843 YLASADYDGVVKVCMSCRLST---YCFRKK 869 (874)
Q Consensus 843 ~laS~~~Dg~V~~WD~~~~~~---~~~~~~ 869 (874)
+|++|+.|+++++||+..++. +.+|.+
T Consensus 272 YlvTassd~~~rlW~~~~~k~v~qy~gh~K 301 (311)
T KOG0315|consen 272 YLVTASSDHTARLWDLSAGKEVRQYQGHHK 301 (311)
T ss_pred EEEecCCCCceeecccccCceeeecCCccc
Confidence 999999999999999998753 555543
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.6e-08 Score=102.53 Aligned_cols=98 Identities=20% Similarity=0.263 Sum_probs=77.0
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCC-EEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~-~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~ 832 (874)
+..|.+.-.+-.-+.| +.||.+.|+..+|+|.-. .||++|.|++.+|||++.. + .+.....|...|.
T Consensus 127 ~TiKLW~~~r~~Sv~T-----f~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~------g-k~~~i~ah~~Eil 194 (311)
T KOG0277|consen 127 GTIKLWDPNRPNSVQT-----FNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSP------G-KFMSIEAHNSEIL 194 (311)
T ss_pred CceEeecCCCCcceEe-----ecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCC------C-ceeEEEeccceeE
Confidence 3445555544444444 556799999999999876 6999999999999998853 1 3333334567999
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
|+-||.|+.++||+|+-|+.|++||+...++
T Consensus 195 ~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~ 225 (311)
T KOG0277|consen 195 CCDWSKYNHNVLATGGVDNLVRGWDIRNLRT 225 (311)
T ss_pred eecccccCCcEEEecCCCceEEEEehhhccc
Confidence 9999999999999999999999999997644
|
|
| >KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.1e-08 Score=107.91 Aligned_cols=89 Identities=13% Similarity=0.274 Sum_probs=74.1
Q ss_pred CCCCCCCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCC--CCCCccccc----Ceee--ecCCCceeEEEEeCCCCCEE
Q 002843 774 EFNNSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNAL--FNDSVDVYY----PAVE--MSNRSKLSCVCWNNYIKNYL 844 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~--~~~~~~~~~----p~~~--~~~~~~v~~l~wnp~~~~~l 844 (874)
.|.||.+.|.+|+|+|..++ |||||.|++||+||++.. +-...|.|. |..+ ..|.+||..+||.. ++.+|
T Consensus 183 ~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tS-d~~~l 261 (397)
T KOG4283|consen 183 TLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTS-DARYL 261 (397)
T ss_pred eeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecc-cchhh
Confidence 56789999999999999999 999999999999999964 223334333 5555 34778999999998 58899
Q ss_pred EEeeCCCcEEEEeCCCccc
Q 002843 845 ASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 845 aS~~~Dg~V~~WD~~~~~~ 863 (874)
++++.|..+++|+...|..
T Consensus 262 ~~~gtd~r~r~wn~~~G~n 280 (397)
T KOG4283|consen 262 ASCGTDDRIRVWNMESGRN 280 (397)
T ss_pred hhccCccceEEeecccCcc
Confidence 9999999999999997743
|
|
| >KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.1e-08 Score=111.60 Aligned_cols=89 Identities=18% Similarity=0.185 Sum_probs=75.9
Q ss_pred CCCCCCCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCCCCcccccCeeeecCC-CceeEEEEeCCCCCEEEEeeCCC
Q 002843 774 EFNNSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR-SKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~-~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
..-||+..|..|+|+|.+.. +||||.|-+|+||.+-..- ...+.-.|++++.+| .+|--|+|.|.-.|+|+|+++|.
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~-l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn 154 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENG-LTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN 154 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcc-cccCcccceEEEeecceeEEEEeecccchhhHhhccCCc
Confidence 45689999999999999998 9999999999999988531 112223689998755 57999999999999999999999
Q ss_pred cEEEEeCCCccc
Q 002843 852 VVKVCMSCRLST 863 (874)
Q Consensus 852 ~V~~WD~~~~~~ 863 (874)
+|.|||+.++..
T Consensus 155 ~v~iWnv~tgea 166 (472)
T KOG0303|consen 155 TVSIWNVGTGEA 166 (472)
T ss_pred eEEEEeccCCce
Confidence 999999999865
|
|
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.8e-08 Score=106.92 Aligned_cols=83 Identities=16% Similarity=0.251 Sum_probs=68.2
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCC----------CCcccccCee-ee-cCCCceeEEEEeCCCCCE
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFN----------DSVDVYYPAV-EM-SNRSKLSCVCWNNYIKNY 843 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~----------~~~~~~~p~~-~~-~~~~~v~~l~wnp~~~~~ 843 (874)
..|..++.+-+|+|||.++||||+|-.|||+|+...+. +....| |+. ++ .|-..|++|.|.| ..++
T Consensus 109 t~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~h-PvIRTlYDH~devn~l~FHP-re~I 186 (430)
T KOG0640|consen 109 TSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARH-PVIRTLYDHVDEVNDLDFHP-RETI 186 (430)
T ss_pred eecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCC-ceEeehhhccCcccceeecc-hhhe
Confidence 34699999999999999999999999999999984321 222233 554 33 4668999999999 5889
Q ss_pred EEEeeCCCcEEEEeCCC
Q 002843 844 LASADYDGVVKVCMSCR 860 (874)
Q Consensus 844 laS~~~Dg~V~~WD~~~ 860 (874)
|+||+.|++||++|++.
T Consensus 187 LiS~srD~tvKlFDfsK 203 (430)
T KOG0640|consen 187 LISGSRDNTVKLFDFSK 203 (430)
T ss_pred EEeccCCCeEEEEeccc
Confidence 99999999999999985
|
|
| >KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.6e-08 Score=105.79 Aligned_cols=88 Identities=18% Similarity=0.271 Sum_probs=67.9
Q ss_pred CCCCeeEEEECCCCC-EEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEE
Q 002843 778 SANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVC 856 (874)
Q Consensus 778 ~~~~V~si~F~~d~~-~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~W 856 (874)
..+-|++|+|||.-. +||.||.|++||+||+..- .. -.|-....+.+.|.|++|+- +++.+++|+-|+.+++|
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~-g~----~~~ka~~~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~w 99 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNS-GQ----LVPKAQQSHDGPVLDVCWSD-DGSKVFSGGCDKQAKLW 99 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecC-Cc----ccchhhhccCCCeEEEEEcc-CCceEEeeccCCceEEE
Confidence 468999999999444 5889999999999999862 00 12322334678899999997 68999999999999999
Q ss_pred eCCCccc--eeeeeeee
Q 002843 857 MSCRLST--YCFRKKFV 871 (874)
Q Consensus 857 D~~~~~~--~~~~~~f~ 871 (874)
|+.++|. +--|-+-|
T Consensus 100 DL~S~Q~~~v~~Hd~pv 116 (347)
T KOG0647|consen 100 DLASGQVSQVAAHDAPV 116 (347)
T ss_pred EccCCCeeeeeecccce
Confidence 9999866 44444433
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1e-08 Score=106.84 Aligned_cols=87 Identities=13% Similarity=0.258 Sum_probs=72.3
Q ss_pred ccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCC
Q 002843 772 TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 772 ~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
.+++.+|...|.||+|+.||..||+|+.||+++||++... +.... ..--.|++.|-.|+|.|.+...+|+++.|+
T Consensus 13 ~r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~-r~~~~----~~~~gh~~svdql~w~~~~~d~~atas~dk 87 (313)
T KOG1407|consen 13 RRELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD-RFRKE----LVYRGHTDSVDQLCWDPKHPDLFATASGDK 87 (313)
T ss_pred hHHhhhhhhcceEEEEcccCceeeecccCCceEEEEecch-hhhhh----hcccCCCcchhhheeCCCCCcceEEecCCc
Confidence 3677788999999999999999999999999999999865 11111 111235678999999999999999999999
Q ss_pred cEEEEeCCCccc
Q 002843 852 VVKVCMSCRLST 863 (874)
Q Consensus 852 ~V~~WD~~~~~~ 863 (874)
+|++||+.++++
T Consensus 88 ~ir~wd~r~~k~ 99 (313)
T KOG1407|consen 88 TIRIWDIRSGKC 99 (313)
T ss_pred eEEEEEeccCcE
Confidence 999999998755
|
|
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.72 E-value=2e-08 Score=115.31 Aligned_cols=81 Identities=14% Similarity=0.299 Sum_probs=71.0
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeee-ecCCCceeEEEEeCCCCCEEEEeeC--CC
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE-MSNRSKLSCVCWNNYIKNYLASADY--DG 851 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~-~~~~~~v~~l~wnp~~~~~laS~~~--Dg 851 (874)
+.+|..-||.++|++|+.+||+||.|..+.|||.... .|... ..|.+.|-.++|.|+.+++||||+- |+
T Consensus 297 ~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~--------~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~ 368 (484)
T KOG0305|consen 297 LQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP--------EPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADR 368 (484)
T ss_pred hhcccceeeeeEECCCCCeeccCCCccceEeccCCCc--------cccEEEeccceeeeEeeeCCCccCceEEcCCCccc
Confidence 6779999999999999999999999999999998543 33334 4578899999999999999999877 99
Q ss_pred cEEEEeCCCccc
Q 002843 852 VVKVCMSCRLST 863 (874)
Q Consensus 852 ~V~~WD~~~~~~ 863 (874)
+|++||+.++..
T Consensus 369 ~i~fwn~~~g~~ 380 (484)
T KOG0305|consen 369 CIKFWNTNTGAR 380 (484)
T ss_pred EEEEEEcCCCcE
Confidence 999999997754
|
|
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.6e-08 Score=109.12 Aligned_cols=77 Identities=9% Similarity=0.081 Sum_probs=65.3
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec--CCCceeEEEEeCCCCCEEEEeeCCC
Q 002843 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS--NRSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~--~~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
.+.+|+..|..|.||||.+||.|+|.|+.+++||+.++.. .+.+. +.-.++|++|.| ++..+++|+-|+
T Consensus 264 tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~--------~~~y~~~~~~S~~sc~W~p-Dg~~~V~Gs~dr 334 (519)
T KOG0293|consen 264 TLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDL--------RHLYPSGLGFSVSSCAWCP-DGFRFVTGSPDR 334 (519)
T ss_pred eeecccCceEEEEECCCCCeEEecCchHheeeccCCcchh--------hhhcccCcCCCcceeEEcc-CCceeEecCCCC
Confidence 4567899999999999999999999999999999999831 12222 235799999999 577899999999
Q ss_pred cEEEEeCC
Q 002843 852 VVKVCMSC 859 (874)
Q Consensus 852 ~V~~WD~~ 859 (874)
++..||+.
T Consensus 335 ~i~~wdlD 342 (519)
T KOG0293|consen 335 TIIMWDLD 342 (519)
T ss_pred cEEEecCC
Confidence 99999997
|
|
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.4e-08 Score=120.31 Aligned_cols=98 Identities=15% Similarity=0.202 Sum_probs=76.1
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCC-----CCCCC----cccccCee--eecCCCceeEEEEeCCCCCE
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNA-----LFNDS----VDVYYPAV--EMSNRSKLSCVCWNNYIKNY 843 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~-----~~~~~----~~~~~p~~--~~~~~~~v~~l~wnp~~~~~ 843 (874)
+..|.+.|+|+-|+|||+|||+||.|+-|-||+... ++... -.-+...+ ...|.+.|..|+|+| +..+
T Consensus 65 m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp-~~~~ 143 (942)
T KOG0973|consen 65 MDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP-DDSL 143 (942)
T ss_pred eccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC-CccE
Confidence 344699999999999999999999999999999984 11110 00111121 224668899999999 6889
Q ss_pred EEEeeCCCcEEEEeCCCc---cceeeeeeeeee
Q 002843 844 LASADYDGVVKVCMSCRL---STYCFRKKFVFT 873 (874)
Q Consensus 844 laS~~~Dg~V~~WD~~~~---~~~~~~~~f~~~ 873 (874)
|||++.|++|.|||..++ +.+.+|.++|-.
T Consensus 144 lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKG 176 (942)
T KOG0973|consen 144 LVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKG 176 (942)
T ss_pred EEEecccceEEEEccccceeeeeeecccccccc
Confidence 999999999999999986 338888888754
|
|
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.1e-08 Score=108.25 Aligned_cols=95 Identities=19% Similarity=0.248 Sum_probs=74.2
Q ss_pred cceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEE
Q 002843 756 CKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVC 835 (874)
Q Consensus 756 ~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~ 835 (874)
-.|..|+..+.++...+. .+.-.+.|++|+|||-.|+||..|+.|||||+....+- ..+|. |.++|..|+
T Consensus 327 w~Fsd~~~g~~lt~vs~~---~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~---a~Fpg----ht~~vk~i~ 396 (506)
T KOG0289|consen 327 WAFSDISSGSQLTVVSDE---TSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNV---AKFPG----HTGPVKAIS 396 (506)
T ss_pred EEEEEccCCcEEEEEeec---cccceeEEeeEcCCceEEeccCCCceEEEEEcCCcccc---ccCCC----CCCceeEEE
Confidence 355566666666655431 23456889999999999999999999999999976321 12333 478999999
Q ss_pred EeCCCCCEEEEeeCCCcEEEEeCCCc
Q 002843 836 WNNYIKNYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 836 wnp~~~~~laS~~~Dg~V~~WD~~~~ 861 (874)
|+- ++-+||++..|+.|++||+...
T Consensus 397 FsE-NGY~Lat~add~~V~lwDLRKl 421 (506)
T KOG0289|consen 397 FSE-NGYWLATAADDGSVKLWDLRKL 421 (506)
T ss_pred ecc-CceEEEEEecCCeEEEEEehhh
Confidence 996 6889999999999999999864
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.1e-08 Score=106.35 Aligned_cols=91 Identities=14% Similarity=0.186 Sum_probs=77.3
Q ss_pred hhccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCC-CCCcccccCeeeecCCCce
Q 002843 753 DGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALF-NDSVDVYYPAVEMSNRSKL 831 (874)
Q Consensus 753 ~~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~-~~~~~~~~p~~~~~~~~~v 831 (874)
+..+|++.-+...++-||.. |-+||++++|+|.|+||+|+..||+++|||+.+.- ..... .|..-|
T Consensus 313 DktIk~wdv~tg~cL~tL~g-----hdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~--------ah~hfv 379 (406)
T KOG0295|consen 313 DKTIKIWDVSTGMCLFTLVG-----HDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLE--------AHEHFV 379 (406)
T ss_pred cceEEEEeccCCeEEEEEec-----ccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccC--------CCccee
Confidence 36789999999999999972 49999999999999999999999999999999862 12221 235568
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEe
Q 002843 832 SCVCWNNYIKNYLASADYDGVVKVCM 857 (874)
Q Consensus 832 ~~l~wnp~~~~~laS~~~Dg~V~~WD 857 (874)
+|+.|.. +..+++||+-|-+|++|.
T Consensus 380 t~lDfh~-~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 380 TSLDFHK-TAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred EEEecCC-CCceEEeccccceeeeee
Confidence 9999997 577999999999999996
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=4e-08 Score=103.94 Aligned_cols=83 Identities=14% Similarity=0.186 Sum_probs=70.4
Q ss_pred cCCCCCCCCeeEEEECC-CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCC
Q 002843 773 GEFNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 773 ~~~~~~~~~V~si~F~~-d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
..+.||+.-|.+|+++| +++.|+|||.||+.||||++.+ ++......|.+.|++|+|-| .+.-+|+||.|+
T Consensus 180 ~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~-------~c~qtF~ghesDINsv~ffP-~G~afatGSDD~ 251 (343)
T KOG0286|consen 180 QVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG-------QCVQTFEGHESDINSVRFFP-SGDAFATGSDDA 251 (343)
T ss_pred EEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCc-------ceeEeecccccccceEEEcc-CCCeeeecCCCc
Confidence 35668899999999999 9999999999999999999976 22222234678999999999 588999999999
Q ss_pred cEEEEeCCCccc
Q 002843 852 VVKVCMSCRLST 863 (874)
Q Consensus 852 ~V~~WD~~~~~~ 863 (874)
+.+++|+...|.
T Consensus 252 tcRlyDlRaD~~ 263 (343)
T KOG0286|consen 252 TCRLYDLRADQE 263 (343)
T ss_pred eeEEEeecCCcE
Confidence 999999986543
|
|
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.3e-08 Score=107.58 Aligned_cols=77 Identities=13% Similarity=0.344 Sum_probs=67.3
Q ss_pred CCCCCCCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCC
Q 002843 774 EFNNSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
.|.+|.+||.++.|+|-.+| |++||.|+++|+||+++. ..|+..+. |.+||.|+.||. +-.|+||+.|.
T Consensus 340 s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~-------k~plydI~~h~DKvl~vdW~~--~~~IvSGGaD~ 410 (423)
T KOG0313|consen 340 SLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRST-------KAPLYDIAGHNDKVLSVDWNE--GGLIVSGGADN 410 (423)
T ss_pred eeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccC-------CCcceeeccCCceEEEEeccC--CceEEeccCcc
Confidence 36788999999999999998 999999999999999986 24777765 668999999995 66899999999
Q ss_pred cEEEEeCC
Q 002843 852 VVKVCMSC 859 (874)
Q Consensus 852 ~V~~WD~~ 859 (874)
+|+|.--.
T Consensus 411 ~l~i~~~~ 418 (423)
T KOG0313|consen 411 KLRIFKGS 418 (423)
T ss_pred eEEEeccc
Confidence 99997544
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.66 E-value=5.5e-08 Score=109.42 Aligned_cols=77 Identities=18% Similarity=0.366 Sum_probs=66.1
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKV 855 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~ 855 (874)
-|...|.+|+|||||.|||.|...++|-+||+.+.. . ....+. |+++|.||+|||. ..+||+||.|..|.|
T Consensus 485 ~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~-----~--~~~~w~FHtakI~~~aWsP~-n~~vATGSlDt~Vii 556 (603)
T KOG0318|consen 485 EHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASRE-----V--KTNRWAFHTAKINCVAWSPN-NKLVATGSLDTNVII 556 (603)
T ss_pred cccCCceEEEECCCCcEEEEeccCCcEEEEEcccCc-----e--ecceeeeeeeeEEEEEeCCC-ceEEEeccccceEEE
Confidence 349999999999999999999999999999999752 1 122344 6899999999995 669999999999999
Q ss_pred EeCCCc
Q 002843 856 CMSCRL 861 (874)
Q Consensus 856 WD~~~~ 861 (874)
|++.+.
T Consensus 557 ysv~kP 562 (603)
T KOG0318|consen 557 YSVKKP 562 (603)
T ss_pred EEccCh
Confidence 999975
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 874 | ||||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 2e-08 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 4e-07 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 3e-04 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 3e-04 |
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 86.5 bits (214), Expect = 2e-18
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPK 557
Y SPE++ G + +I+SLG++ FEL F ++ ++D+R+ P F + P+
Sbjct: 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQ 301
Query: 558 EAGFCLWQLHPEPLSRPTTREILQSE 583
E L P P RP +I+++
Sbjct: 302 EHMMVQDMLSPSPTERPEATDIIENA 327
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 5e-05
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 311 HGVNLREWLNARGHKGKR--IECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368
NL++W+N R R CL+IF QI V++ H++G+ DLKPS+ + V
Sbjct: 144 RKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVV 203
Query: 369 KYIG 372
K +G
Sbjct: 204 K-VG 206
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 2e-14
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPK 557
Y SPE++ G + +I+SLG++ FEL F ++ ++D+R+ PP F + P
Sbjct: 196 YMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPC 255
Query: 558 EAGFCLWQLHPEPLSRPTTREILQSE 583
E L P P+ RP I+++
Sbjct: 256 EYVMVQDMLSPSPMERPEAINIIENA 281
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 8e-05
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 311 HGVNLREWLNARGHKGKRIE--CLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368
NL++W+N R +R CL+IF QI V++ H++G+ DLKPS+ + V
Sbjct: 98 RKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVV 157
Query: 369 KYIG 372
K +G
Sbjct: 158 K-VG 160
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 70.3 bits (171), Expect = 2e-12
Identities = 78/573 (13%), Positives = 160/573 (27%), Gaps = 161/573 (28%)
Query: 324 HKGKRIECLYIFRQ-IVALVDYHHTQGVTFLDLKPSSFK-LLQS----NQVKYIGPII-- 375
++ K I L +F V D Q + L ++ S + + +
Sbjct: 16 YQYKDI--LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLS 73
Query: 376 -QKETLESASLDIPHSENY-----RLRRRSAEEEMFTTGIASAKKQKFNHN-----MNFS 424
Q+E ++ ++ NY ++ + M T + + +N N N S
Sbjct: 74 KQEEMVQKF-VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS 132
Query: 425 RWWSLFPSKYGNKIETA--NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTA 482
R Y K+ A V I G G K+ + +
Sbjct: 133 R-----LQPY-LKLRQALLELRPAKNVLI----------DGVLGSG---KTW--VALDVC 171
Query: 483 QQQSTSVSEQLEEK--WYASPEELSGGVCTTSSNIYS-LGVLFFELFGRF----DSERAL 535
S V +++ K W L+ C + + L L +++ + D +
Sbjct: 172 L--SYKVQCKMDFKIFW------LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 536 AAAMSDLRDRILPPSFLSENPKEAGFCL------WQLHPEPL------SRP--TTR--EI 579
+ ++ + L P E CL + + + TTR ++
Sbjct: 224 KLRIHSIQAELR--RLLKSKPYEN--CLLVLLNVQ--NAKAWNAFNLSCKILLTTRFKQV 277
Query: 580 LQSEVTNEFQEVCAEELLSSIDQDDSESELLLHFL-ISLEEEKQNQASK---LVGEIRSL 635
+ + ++ D+ + LLL +L ++ + + + +
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVK-SLLLKYLDCRPQDLPR-EVLTTNPRR--LSII 333
Query: 636 EADIKE-VERRHYLKKPLVDPSLQNESAPSRENRYFNEQLSSSEAQLSPISDANEMRLMR 694
I++ + K D + SS L P E R
Sbjct: 334 AESIRDGLATWDNWKHVNCDK--------------LTTIIESSLNVLEP----AEYR--- 372
Query: 695 NLNQLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDG 754
F + L + I PT L +
Sbjct: 373 -------KMF-------------------------DRLSVFPPSAHI--PTILLSLIWFD 398
Query: 755 LCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGV--SKKIKIFEFNALF 812
+ K +V ++ + + + V E + + K+K+ AL
Sbjct: 399 V------IKSDVMVVVN--KLHKYSLVEK----QPKESTISIPSIYLELKVKLENEYALH 446
Query: 813 NDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLA 845
VD +Y + + L + Y +++
Sbjct: 447 RSIVD-HYNIPKTFDSDDLIPPYLDQYFYSHIG 478
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 1e-05
Identities = 59/332 (17%), Positives = 92/332 (27%), Gaps = 130/332 (39%)
Query: 576 TREILQSEVTNEFQEVCAEELLSSIDQDDSESELLLHFLISLEEEKQNQASKLVGEIRSL 635
+ IL E E + I D+ S L F L +++ K V E+ L
Sbjct: 42 PKSILSKE---EIDHI--------IMSKDAVSGTLRLFWT-LLSKQEEMVQKFVEEV--L 87
Query: 636 EADIKEVERRHYLKKPLVDPSLQNES-APSRENRYFNEQLSSSEAQLSPISDANEMRLMR 694
+ Y K L+ P ++ E PS R + EQ +
Sbjct: 88 RIN--------Y--KFLMSP-IKTEQRQPSMMTRMYIEQRDR----------------LY 120
Query: 695 NLNQLERAYFSMRSQ--IQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFF 752
N NQ+ Y R Q ++L + LL R +
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQA---------LLELRPAKNVL----------------- 154
Query: 753 DGLCKYARYSKFEVQGMLRTG------EFNNSANVICSISF----------DRDEDHFAA 796
+ G+L +G + S V C + F + E
Sbjct: 155 -------------IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET---- 197
Query: 797 AGVSKKIKIFE-FNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY------ 849
+ E L + + S+ KL ++ L S Y
Sbjct: 198 --------VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249
Query: 850 -DGV--VKVC----MSCR--LSTYCFRKKFVF 872
V K +SC+ L+T R K V
Sbjct: 250 LLNVQNAKAWNAFNLSCKILLTT---RFKQVT 278
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENP 556
Y SPE++S ++Y+LG++ EL D+ + +DLRD I+ F +
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF---DK 242
Query: 557 KEAGFCLWQLHPEPLSRPTTREILQS 582
KE L +P RP T EIL++
Sbjct: 243 KEKTLLQKLLSKKPEDRPNTSEILRT 268
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 3e-08
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFELF-GR--FDSERALAAAMSDLRDRILPPS 550
Y SPE+ G S++YSLG + +E+ G F + ++ A +R+ +PPS
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 7e-08
Identities = 24/112 (21%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFELF-GR--FDSERALAAAMSDLRDRI-LPPSFLS 553
Y SPE+ G ++IYS+G++ +E+ G F+ E A++ A+ ++D + + +
Sbjct: 178 YFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVR 237
Query: 554 EN-PKE-AGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLSSIDQD 603
++ P+ + L + +R T + ++ ++++ E A E + +D+
Sbjct: 238 KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDVYELDKM 289
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 8e-07
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 498 YASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLR--DRILPPSFLSE 554
Y + E L G G ++YSLG++FFE+ F + + LR PP F
Sbjct: 196 YVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDN 255
Query: 555 NPKEA-GFCLWQLHPEPLSRPTTREILQSE-VTNEFQEVCAEELLSSI 600
K + +P RP R +L S + + Q+ +E L S+
Sbjct: 256 KMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEALKSL 303
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 315 LREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369
L + +++ +R E +FRQI+ + Y H+QG+ DLKP + + +S VK
Sbjct: 102 LYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVK 156
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 1e-06
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFELF-GR--FDSERALAAAMSDLRDRILPPS 550
Y +PE S T ++IY+L + +E G + + L+ + + I PS
Sbjct: 201 YMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD-QLSVMGAHINQAIPRPS 255
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 11/89 (12%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGR----FDSERALAAAMSDLRDRILPPSFLS 553
Y +PE L G T+++++SLG+ E+ LR LPP F +
Sbjct: 222 YMAPELLQGS-YGTAADVFSLGLTILEVACNMELPHG-----GEGWQQLRQGYLPPEFTA 275
Query: 554 ENPKEA-GFCLWQLHPEPLSRPTTREILQ 581
E + L P+P R T +L
Sbjct: 276 GLSSELRSVLVMMLEPDPKLRATAEALLA 304
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 5e-05
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 15/95 (15%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELF-GR--FDSERALAAAMSDLRDRI------- 546
+Y SPE + S+I+SLG L +E+ + F + + L +I
Sbjct: 201 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD---KMNLYSLCKKIEQCDYPP 257
Query: 547 LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
LP SE ++ ++P+P RP +
Sbjct: 258 LPSDHYSEELRQ--LVNMCINPDPEKRPDVTYVYD 290
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 2e-04
Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 12/101 (11%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFE-LFGR--FDSERALAAAMSDLRDRILPPSFLSE 554
+ +PE + G T +++IY++G + D + S+
Sbjct: 243 FQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKT-YDSY--- 297
Query: 555 NPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEE 595
+ P+P R TT E + +++T +EV A++
Sbjct: 298 ----GRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQD 334
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 21/128 (16%)
Query: 467 FGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW-------YASPE---ELSGGVCTTSSNIY 516
FG S++ + S +EE+ Y +PE S +I+
Sbjct: 182 FG----SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIW 237
Query: 517 SLGVLFFEL-FGR--FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573
+LG + + L F + F+ L + + P ++ L P R
Sbjct: 238 ALGCILYLLCFRQHPFEDGAKLRI----VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEER 293
Query: 574 PTTREILQ 581
+ E++
Sbjct: 294 LSIAEVVH 301
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 25/134 (18%), Positives = 43/134 (32%), Gaps = 10/134 (7%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELF-GR--FDSERALAAAMSDLRDRILP-PSFL 552
+Y SPE S+I++LG + +EL + F++ + + P
Sbjct: 190 YYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHY 249
Query: 553 SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLSSIDQDDSESELLLH 612
S + + P RP+ IL+ F E+ LS +
Sbjct: 250 SYDLRS--LVSQLFKRNPRDRPSVNSILE----KGFIAKRIEKFLSPQLIAEEFCLKTFS 303
Query: 613 FLISLEEEKQNQAS 626
S + AS
Sbjct: 304 KFGSQPIPAKRPAS 317
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 3e-04
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 16/93 (17%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRIL------P 548
Y SPE+++ S+I+SLG L +EL F A + +L +I
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT-----AFSQKELAGKIREGKFRRI 236
Query: 549 PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
P S+ E L+ + RP+ EIL+
Sbjct: 237 PYRYSDELNE--IITRMLNLKDYHRPSVEEILE 267
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 4e-04
Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Query: 310 DHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN-QV 368
G L + L + Q++ L+ H G+ L+P +L V
Sbjct: 188 TFGEVLLSHSSTHKSLVHH-ARLQLTLQVIRLLASLHHYGLVHTYLRPVDI-VLDQRGGV 245
Query: 369 K 369
Sbjct: 246 F 246
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 4e-04
Identities = 25/184 (13%), Positives = 62/184 (33%), Gaps = 25/184 (13%)
Query: 491 EQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL------FGRFDSERALAAAMSDLRD 544
E +++ + S + S+++SLG + + + F + ++ + A+ D
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 238
Query: 545 RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLSSIDQDD 604
I P ++ ++ L +P R + E+L + ++ +
Sbjct: 239 EIEFPDIPEKDLQD--VLKCCLKRDPKQRISIPELLAH----PYVQIQTHPVNQMAKGTT 292
Query: 605 SESELLLHFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKPLVDPSLQNESAPS 664
E + +L L+ L N + ++ ++L E + S
Sbjct: 293 EEMKYVLGQLVGL-----NSPNSILKAAKTLYEHYSGGESH--------NSSSSKTFEKK 339
Query: 665 RENR 668
R +
Sbjct: 340 RGKK 343
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 5e-04
Identities = 10/101 (9%), Positives = 29/101 (28%), Gaps = 14/101 (13%)
Query: 498 YASPEELSG-----GVCTTSSNIYSLGVLFFELF-GR--FDSERALAAAMSDLRDRILPP 549
+ L + T + + ++LG+ + ++ + AL + R P
Sbjct: 278 TTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIP 337
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590
+ L R + +++ + +
Sbjct: 338 QPVRA------LLEGFLRYPKEDRLLPLQAMETPEYEQLRT 372
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 6e-04
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 15/94 (15%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFE-LFGR--FDSERALAAAMSDLRDRILP-----P 549
Y +PE LS + +++S+G + + L G+ F++ + + RI P
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-----CLKETYLRIKKNEYSIP 235
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583
++ L +P +RPT E+L E
Sbjct: 236 KHINPVAAS--LIQKMLQTDPTARPTINELLNDE 267
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 7e-04
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 15/94 (15%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFE-LFGR--FDSERALAAAMSDLRDRILP-----P 549
Y +PE LS + +++S+G + + L G+ F++ + + RI P
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-----CLKETYLRIKKNEYSIP 261
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583
++ L +P +RPT E+L E
Sbjct: 262 KHINPVAAS--LIQKMLQTDPTARPTINELLNDE 293
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 39.9 bits (92), Expect = 7e-04
Identities = 10/45 (22%), Positives = 16/45 (35%), Gaps = 23/45 (51%)
Query: 620 EKQNQASKLVGEIRSLEADIKEVERRHYLKKPLVDPSLQNESAPS 664
EKQ ++ L+A +K L +SAP+
Sbjct: 18 EKQ--------ALKKLQASLK-------LYAD--------DSAPA 39
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 9e-04
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 19/96 (19%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFE-LFGR--FDSERALAAAMSDLRDRILP-----P 549
Y SPE + S+++SLG +F+ L GR FD++ + + ++++ P
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD-----TVKNTLNKVVLADYEMP 232
Query: 550 SFLSENPKEAGFCLWQ--LHPEPLSRPTTREILQSE 583
SFLS K+ L L P R + +L
Sbjct: 233 SFLSIEAKD----LIHQLLRRNPADRLSLSSVLDHP 264
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 874 | |||
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.98 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.98 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.98 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.98 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.98 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.98 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.98 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.98 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.98 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.98 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.98 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.98 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.98 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.98 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.98 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.98 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.98 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.98 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.98 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.98 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.98 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.98 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.98 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.98 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.98 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.98 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.98 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.98 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.98 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.98 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.98 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.98 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.98 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.97 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.97 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.97 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.97 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.97 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.97 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.97 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.97 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.97 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.97 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.97 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.97 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.97 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.97 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.97 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.97 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.97 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.97 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.97 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.97 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.97 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.97 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.97 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.97 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.97 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.97 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.97 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.97 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.97 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.97 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.97 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.97 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.97 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.97 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.97 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.97 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.97 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.97 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.97 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.97 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.97 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.97 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.97 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.97 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.97 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.97 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.97 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.97 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.97 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.97 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.97 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.97 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.97 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.97 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.97 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.97 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.97 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.97 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.97 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.97 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.97 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.97 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.97 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.97 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.97 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.97 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.97 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.97 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.97 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.97 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.97 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.97 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.97 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.97 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.97 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.97 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.97 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.97 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.97 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.97 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.97 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.97 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.97 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.97 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.97 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.97 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.97 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.97 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.97 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.97 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.97 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.97 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.97 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.96 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.96 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.96 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.96 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.96 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.96 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.96 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.96 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.96 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.96 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.96 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.96 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.95 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.95 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.93 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.91 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.73 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.5 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.38 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.35 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.34 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.34 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.32 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.31 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.3 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.3 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.28 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.27 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.27 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.27 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.26 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.24 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.24 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.23 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.23 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.23 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.23 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.23 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.21 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.21 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.21 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.2 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.2 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.2 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.19 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.19 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.19 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.19 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.18 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.18 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.17 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.17 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.16 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.15 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.15 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.15 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.13 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.12 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.12 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.11 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.1 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.09 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.09 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.08 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.07 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.07 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.07 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.05 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.04 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.03 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.02 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.01 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.0 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 98.99 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 98.99 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 98.99 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 98.99 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 98.99 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 98.98 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 98.98 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 98.98 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 98.98 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 98.98 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 98.97 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 98.97 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 98.96 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 98.94 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 98.94 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 98.94 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 98.93 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 98.93 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 98.92 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 98.92 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 98.92 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 98.92 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 98.92 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 98.92 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 98.92 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 98.91 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 98.9 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 98.9 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 98.9 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 98.89 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 98.89 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 98.89 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 98.89 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 98.89 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 98.89 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 98.89 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 98.89 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 98.89 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 98.87 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 98.87 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 98.86 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 98.86 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 98.86 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 98.86 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 98.86 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 98.85 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 98.85 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 98.84 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 98.84 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 98.83 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 98.83 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 98.83 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 98.82 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 98.82 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 98.8 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 98.79 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 98.79 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 98.78 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 98.78 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 98.75 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 98.72 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 98.71 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 98.66 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 98.64 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 98.61 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 98.6 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 98.54 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 98.5 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 98.44 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 98.43 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 98.39 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 98.28 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 98.17 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 97.98 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 97.98 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 97.95 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.92 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 97.89 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 97.85 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 97.83 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 97.79 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 97.78 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 97.74 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 97.74 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 97.73 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 97.72 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 97.72 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 97.7 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 97.67 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 97.66 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 97.62 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 97.62 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 97.61 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.55 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 97.54 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 97.51 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 97.51 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 97.47 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 97.47 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 97.43 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 97.41 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 97.41 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 97.4 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 97.39 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 97.38 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 97.3 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 97.27 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 97.27 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 97.25 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 97.14 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 97.08 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 97.02 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 97.01 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.01 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 96.98 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 96.86 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 96.84 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 96.82 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 96.66 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 96.65 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 96.65 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 96.64 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 96.62 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 96.58 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 96.49 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 96.42 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 96.38 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 96.37 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 96.09 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 96.03 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 96.03 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 95.99 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 95.94 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 95.91 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 95.83 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 95.77 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 95.55 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 95.04 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 95.04 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 95.02 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 94.79 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 94.77 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 94.67 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 94.67 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 94.46 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 94.43 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 94.42 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 94.37 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 94.36 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 93.99 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 93.86 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 93.83 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 93.44 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 93.44 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 93.37 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 93.3 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 92.85 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 92.75 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 92.44 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 91.84 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 91.83 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 91.76 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 91.71 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 91.69 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 91.48 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 90.82 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 90.74 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 90.56 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 90.53 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 90.22 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 89.28 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 89.25 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 89.11 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 88.95 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 88.57 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 88.37 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 87.56 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 87.37 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 86.29 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 85.24 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 85.19 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 85.04 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 84.28 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 84.1 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 83.97 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 83.9 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 83.55 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 82.43 |
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-44 Score=395.55 Aligned_cols=242 Identities=17% Similarity=0.199 Sum_probs=188.3
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
++|+||++.. ... ++..+.+.+......+......|..+++...||++|.+++....++..
T Consensus 86 ~fG~V~~a~~----~~t-g~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~-------------- 146 (346)
T 4fih_A 86 STGIVCIATV----RSS-GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL-------------- 146 (346)
T ss_dssp SSCEEEEEEE----TTT-CCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEE--------------
T ss_pred cCeEEEEEEE----CCC-CCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE--------------
Confidence 3466777752 111 122233333333233334456677888899999999999987765543
Q ss_pred CCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
++|||||+||+|.+++.+. .+++.+++.|++||+.||+|||++|||||||||+||||+.++.+||+|||+|+.+..
T Consensus 147 --~ivmEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 147 --WVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp --EEEECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred --EEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 4599999999999999875 599999999999999999999999999999999999999999999999999874330
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
.
T Consensus 223 ~------------------------------------------------------------------------------- 223 (346)
T 4fih_A 223 E------------------------------------------------------------------------------- 223 (346)
T ss_dssp S-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAM 539 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~ 539 (874)
....+..+||++|||||++.+..|+.++||||||||||||++|.+||.. ....+
T Consensus 224 ------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~ 279 (346)
T 4fih_A 224 ------------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM 279 (346)
T ss_dssp ------------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred ------------------------CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence 0001456899999999999999999999999999999999999999843 22334
Q ss_pred HHhhcCCCC--CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 540 SDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 540 ~~l~~~~lp--p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
..+.....+ +.+...++.+.+||.+||.+||++|||+.|+|+||||+...
T Consensus 280 ~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 280 KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp HHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence 445443322 22334568899999999999999999999999999998643
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=385.65 Aligned_cols=211 Identities=16% Similarity=0.095 Sum_probs=173.4
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeec--CcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSN--GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLY 333 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~ 333 (874)
..+...+..++....||++|.+++..... +... -+++||||+||+|.++|++.+ .+++.+++.
T Consensus 69 ~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~--------------~~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~ 133 (290)
T 3fpq_A 69 RQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC--------------IVLVTELMTSGTLKTYLKRFK-VMKIKVLRS 133 (290)
T ss_dssp HHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEE--------------EEEEEECCCSCBHHHHHHHHS-SCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcE--------------EEEEEeCCCCCCHHHHHHhcC-CCCHHHHHH
Confidence 34466778899999999999998875421 1111 157999999999999998876 799999999
Q ss_pred HHHHHHHHHHHHHHCC--CcccCCCCCceEEec-CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccch
Q 002843 334 IFRQIVALVDYHHTQG--VTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIA 410 (874)
Q Consensus 334 I~~QIl~aL~yLHs~g--IIHRDLKPsNILL~~-~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~ 410 (874)
|++||+.||+|||++| ||||||||+||||+. ++.+||+|||+|+....
T Consensus 134 ~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~----------------------------- 184 (290)
T 3fpq_A 134 WCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA----------------------------- 184 (290)
T ss_dssp HHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-----------------------------
T ss_pred HHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-----------------------------
Confidence 9999999999999998 999999999999984 78999999999863210
Q ss_pred hhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccc
Q 002843 411 SAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVS 490 (874)
Q Consensus 411 ~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t 490 (874)
....
T Consensus 185 ----------------------------------------------------------------------------~~~~ 188 (290)
T 3fpq_A 185 ----------------------------------------------------------------------------SFAK 188 (290)
T ss_dssp ----------------------------------------------------------------------------TSBE
T ss_pred ----------------------------------------------------------------------------CccC
Confidence 0013
Q ss_pred cccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH---HHHHHHHhhcCCCCCCCCC-CCHHHHHHHHHcc
Q 002843 491 EQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA---LAAAMSDLRDRILPPSFLS-ENPKEAGFCLWQL 566 (874)
Q Consensus 491 ~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~---~~~~~~~l~~~~lpp~~~~-~~p~l~dLi~~cL 566 (874)
..+||+.|||||++.+ +|+.++|||||||+||||+||..||.. ....+..+.....|+.+.. .++.+.+||.+||
T Consensus 189 ~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L 267 (290)
T 3fpq_A 189 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCI 267 (290)
T ss_dssp ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHS
T ss_pred CcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHc
Confidence 5689999999999875 699999999999999999999999853 3344555666655555443 4578999999999
Q ss_pred ccCCCCCCChhHHhhhHHHHh
Q 002843 567 HPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~~~ 587 (874)
++||++|||+.|+|+||||++
T Consensus 268 ~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 268 RQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp CSSGGGSCCHHHHHTSGGGC-
T ss_pred cCChhHCcCHHHHhcCccccC
Confidence 999999999999999999974
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-44 Score=395.76 Aligned_cols=213 Identities=19% Similarity=0.198 Sum_probs=180.4
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYI 334 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I 334 (874)
......|..+++...||++|.+++....++..+ +|||||+||+|.++|... +..+++.+++.|
T Consensus 67 ~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~y----------------iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~ 130 (350)
T 4b9d_A 67 REESRREVAVLANMKHPNIVQYRESFEENGSLY----------------IVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130 (350)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE----------------EEEECCTTCBHHHHHHHTTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEE----------------EEEeCCCCCcHHHHHHHcCCCCCCHHHHHHH
Confidence 344567778899999999999999887665544 599999999999999754 336899999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||+|||++|||||||||+||||+.++.+||+|||+|+.+....
T Consensus 131 ~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~------------------------------- 179 (350)
T 4b9d_A 131 FVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV------------------------------- 179 (350)
T ss_dssp HHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-------------------------------
T ss_pred HHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc-------------------------------
Confidence 9999999999999999999999999999999999999999998433000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
...+..+|
T Consensus 180 ------------------------------------------------------------------------~~~~~~~G 187 (350)
T 4b9d_A 180 ------------------------------------------------------------------------ELARACIG 187 (350)
T ss_dssp ------------------------------------------------------------------------HHHHHHHS
T ss_pred ------------------------------------------------------------------------ccccccCC
Confidence 00135689
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
|++|||||++.+..|+.++||||||||||||++|..||.. ....+..+.....++.....++.+.+||.+||.+||++
T Consensus 188 T~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~ 267 (350)
T 4b9d_A 188 TPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRD 267 (350)
T ss_dssp CCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred CccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHccCChhH
Confidence 9999999999999999999999999999999999999843 33345556666666655666788999999999999999
Q ss_pred CCChhHHhhhHHHHh
Q 002843 573 RPTTREILQSEVTNE 587 (874)
Q Consensus 573 RPTa~EiL~hp~~~~ 587 (874)
|||+.|+|+||||..
T Consensus 268 R~s~~e~l~hp~~~~ 282 (350)
T 4b9d_A 268 RPSVNSILEKGFIAK 282 (350)
T ss_dssp SCCHHHHHTSHHHHT
T ss_pred CcCHHHHhcCHHhhc
Confidence 999999999999974
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=383.82 Aligned_cols=241 Identities=24% Similarity=0.326 Sum_probs=175.3
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC--CCCHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH--KGKRIECL 332 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~--~lse~e~~ 332 (874)
...+...|..++....||++|.+++.....+............. -+++||||+||+|.++|...+. ..++..++
T Consensus 46 ~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~----l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~ 121 (299)
T 4g31_A 46 AREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY----LYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121 (299)
T ss_dssp HHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEE----EEEEEECCCSCCHHHHHHTCCSGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcE----EEEEEecCCCCcHHHHHHhcCCCChhHHHHHH
Confidence 33445667788999999999999988664443221000000111 2679999999999999987642 34567799
Q ss_pred HHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 333 YIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 333 ~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
.|+.||+.||+|||++|||||||||+||||+.++.+||+|||+|+.+.........
T Consensus 122 ~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~------------------------ 177 (299)
T 4g31_A 122 HIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV------------------------ 177 (299)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC------------------------------------
T ss_pred HHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCcccccc------------------------
Confidence 99999999999999999999999999999999999999999999865411100000
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
. +........+..
T Consensus 178 ----------------------------~---------------------------------------~~~~~~~~~~~~ 190 (299)
T 4g31_A 178 ----------------------------L---------------------------------------TPMPAYARHTGQ 190 (299)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------c---------------------------------------cccccccccCCc
Confidence 0 000000112467
Q ss_pred cccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 493 ~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
+||+.|||||++.+..|+.++|||||||+||||++++....+....+..++....|+.+....+.+.+||.+||++||++
T Consensus 191 ~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~ 270 (299)
T 4g31_A 191 VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPME 270 (299)
T ss_dssp -CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGG
T ss_pred ccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHccCCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhH
Confidence 89999999999999999999999999999999999776655555556667777777666666778889999999999999
Q ss_pred CCChhHHhhhHHHHhhHh
Q 002843 573 RPTTREILQSEVTNEFQE 590 (874)
Q Consensus 573 RPTa~EiL~hp~~~~~~~ 590 (874)
|||+.|+|+||||+++..
T Consensus 271 Rps~~eil~h~~~~~~~~ 288 (299)
T 4g31_A 271 RPEAINIIENAVFEDLDF 288 (299)
T ss_dssp SCCHHHHHTSGGGCCC--
T ss_pred CcCHHHHhcCHhhCCCCC
Confidence 999999999999987653
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-43 Score=396.99 Aligned_cols=241 Identities=17% Similarity=0.185 Sum_probs=189.6
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (874)
+|+||++.. ... ++..+.+.+.............|..+++...||++|.+++....++..
T Consensus 164 fG~V~~a~~----~~t-g~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~--------------- 223 (423)
T 4fie_A 164 TGIVCIATV----RSS-GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL--------------- 223 (423)
T ss_dssp SCEEEEEEE----TTT-CCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEE---------------
T ss_pred CcEEEEEEE----CCC-CCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEE---------------
Confidence 466777752 111 222333333333333445566778889999999999999987765543
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcccc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLES 382 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~ 382 (874)
++|||||+||+|.++|+.. .+++.++..|++||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.+...
T Consensus 224 -~iVmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 224 -WVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp -EEEEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred -EEEEeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence 4699999999999999875 5999999999999999999999999999999999999999999999999998743300
Q ss_pred ccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccc
Q 002843 383 ASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHH 462 (874)
Q Consensus 383 ~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~ 462 (874)
T Consensus 301 -------------------------------------------------------------------------------- 300 (423)
T 4fie_A 301 -------------------------------------------------------------------------------- 300 (423)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHH
Q 002843 463 TNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMS 540 (874)
Q Consensus 463 ~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~ 540 (874)
....+..+||++|||||++.+..|+.++|||||||+||||++|.+||.. ....+.
T Consensus 301 -----------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~ 357 (423)
T 4fie_A 301 -----------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK 357 (423)
T ss_dssp -----------------------CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred -----------------------CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH
Confidence 0001466899999999999999999999999999999999999999843 223344
Q ss_pred HhhcCCC--CCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 541 DLRDRIL--PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 541 ~l~~~~l--pp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.+..... .+.+...++.+.+||.+||..||++|||+.|+|+||||+...
T Consensus 358 ~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 358 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp HHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCC
Confidence 4544332 223345668899999999999999999999999999998643
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-43 Score=383.69 Aligned_cols=216 Identities=16% Similarity=0.129 Sum_probs=176.8
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....|..++....||++|.++.....+.+.+ ++||||+||+|.++|++.+ .+++.+++.|+.
T Consensus 77 ~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~y----------------ivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~ 139 (311)
T 4aw0_A 77 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLY----------------FGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 139 (311)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE----------------EEECCCTTEEHHHHHHHHS-SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE----------------EEEecCCCCCHHHHHHHcC-CCCHHHHHHHHH
Confidence 34556778888999999999999877555544 5999999999999998876 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++|||||||||+||||+.++.+||+|||+|+.+.....
T Consensus 140 qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~-------------------------------- 187 (311)
T 4aw0_A 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-------------------------------- 187 (311)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT--------------------------------
T ss_pred HHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC--------------------------------
Confidence 999999999999999999999999999999999999999975430000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.....+.+||+
T Consensus 188 ---------------------------------------------------------------------~~~~~~~~GTp 198 (311)
T 4aw0_A 188 ---------------------------------------------------------------------QARANSFVGTA 198 (311)
T ss_dssp ---------------------------------------------------------------------CCCBCCCCSCG
T ss_pred ---------------------------------------------------------------------cccccCcccCc
Confidence 00114678999
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
.|||||++.+..|+.++|||||||+||||++|..||.. ....+..+....+. -....++.+.+||.+||.+||++||
T Consensus 199 ~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~-~p~~~s~~~~dli~~lL~~dp~~R~ 277 (311)
T 4aw0_A 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYD-FPEKFFPKARDLVEKLLVLDATKRL 277 (311)
T ss_dssp GGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-CCTTCCHHHHHHHHHHSCSSGGGST
T ss_pred ccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCcccCHHHHHHHHHHccCCHhHCc
Confidence 99999999999999999999999999999999999943 33334444443221 1123468899999999999999999
Q ss_pred ChhH------HhhhHHHHhhHhh
Q 002843 575 TTRE------ILQSEVTNEFQEV 591 (874)
Q Consensus 575 Ta~E------iL~hp~~~~~~~~ 591 (874)
|+.| |++||||+++.+.
T Consensus 278 t~~e~~~~~~i~~Hp~F~~idw~ 300 (311)
T 4aw0_A 278 GCEEMEGYGPLKAHPFFESVTWE 300 (311)
T ss_dssp TSGGGTCHHHHHTSGGGTTCCCT
T ss_pred ChHHHcCCHHHHCCCCcCCCCHH
Confidence 9998 5789999887654
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-43 Score=383.00 Aligned_cols=214 Identities=17% Similarity=0.157 Sum_probs=172.8
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
+...+..++....||++|.++.....++..+ ++||||+||+|.++|.+.+ .+++.+++.|++|
T Consensus 72 ~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~----------------ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~q 134 (304)
T 3ubd_A 72 RTKMERDILVEVNHPFIVKLHYAFQTEGKLY----------------LILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAE 134 (304)
T ss_dssp ------CCCCCCCCTTEECEEEEEEETTEEE----------------EEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCeEEEEEEECCEEE----------------EEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHH
Confidence 3455667888899999999999877655544 5999999999999998876 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++|||||||||+|||++.++.+||+|||+|+...+..
T Consensus 135 i~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---------------------------------- 180 (304)
T 3ubd_A 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------------------------- 180 (304)
T ss_dssp HHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC---------------------------------------
T ss_pred HHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC----------------------------------
Confidence 9999999999999999999999999999999999999997432000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
....+.+||+.
T Consensus 181 ---------------------------------------------------------------------~~~~~~~GT~~ 191 (304)
T 3ubd_A 181 ---------------------------------------------------------------------KKAYSFCGTVE 191 (304)
T ss_dssp ---------------------------------------------------------------------CCCCSCCCCGG
T ss_pred ---------------------------------------------------------------------ccccccccCcc
Confidence 00135689999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
|||||++.+..|+.++|||||||+||||+||..||.. ....+..+....++ .....++.+.+||.+||.+||++|||
T Consensus 192 YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dP~~R~t 270 (304)
T 3ubd_A 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-MPQFLSPEAQSLLRMLFKRNPANRLG 270 (304)
T ss_dssp GCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred cCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCC-CCCcCCHHHHHHHHHHcccCHHHCCC
Confidence 9999999999999999999999999999999999943 23334444443221 12235688999999999999999999
Q ss_pred h-----hHHhhhHHHHhhHhhh
Q 002843 576 T-----REILQSEVTNEFQEVC 592 (874)
Q Consensus 576 a-----~EiL~hp~~~~~~~~~ 592 (874)
+ +|+|+||||+++.+..
T Consensus 271 a~~~~~~eil~Hp~f~~idw~~ 292 (304)
T 3ubd_A 271 AGPDGVEEIKRHSFFSTIDWNK 292 (304)
T ss_dssp CSTTTHHHHHTSGGGTTCCHHH
T ss_pred CCcCCHHHHHcCccccCCCHHH
Confidence 5 7999999999876543
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=367.11 Aligned_cols=207 Identities=19% Similarity=0.251 Sum_probs=164.6
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
+...|..+++...||+++.+++....+... +++|||| +|+|.++|.+.+ .+++.+++.|++|
T Consensus 59 ~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~----------------~ivmEy~-~g~L~~~l~~~~-~l~e~~~~~~~~q 120 (275)
T 3hyh_A 59 RIEREISYLRLLRHPHIIKLYDVIKSKDEI----------------IMVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQ 120 (275)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEEECSSEE----------------EEEEECC-CEEHHHHHHHSC-SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCeEEEEEEECCEE----------------EEEEeCC-CCCHHHHHHHcC-CCCHHHHHHHHHH
Confidence 345667788888999999999987654443 4699999 689999998876 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++|||||||||+||||+.++++||+|||+|+...+.
T Consensus 121 i~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~----------------------------------- 165 (275)
T 3hyh_A 121 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----------------------------------- 165 (275)
T ss_dssp HHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-----------------------------------------
T ss_pred HHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCC-----------------------------------
Confidence 999999999999999999999999999999999999998743200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
....+.+||+.
T Consensus 166 ---------------------------------------------------------------------~~~~~~~GT~~ 176 (275)
T 3hyh_A 166 ---------------------------------------------------------------------NFLKTSCGSPN 176 (275)
T ss_dssp ------------------------------------------------------------------------------CT
T ss_pred ---------------------------------------------------------------------CccCCeeECcc
Confidence 00135689999
Q ss_pred ccCcccccCCCC-CCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVC-TTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~y-s~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|||||++.+..| +.++|||||||+||||++|..||.. ....+..+.....+ .....++.+.+||.+||++||++||
T Consensus 177 Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dP~~R~ 255 (275)
T 3hyh_A 177 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT-LPKFLSPGAAGLIKRMLIVNPLNRI 255 (275)
T ss_dssp TSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-CCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred cCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHHccCChhHCc
Confidence 999999998886 5899999999999999999999843 33344455443322 1123467899999999999999999
Q ss_pred ChhHHhhhHHHHh
Q 002843 575 TTREILQSEVTNE 587 (874)
Q Consensus 575 Ta~EiL~hp~~~~ 587 (874)
|+.|+|+||||+.
T Consensus 256 s~~eil~hpw~k~ 268 (275)
T 3hyh_A 256 SIHEIMQDDWFKV 268 (275)
T ss_dssp CHHHHHHCHHHHT
T ss_pred CHHHHHcCccccc
Confidence 9999999999973
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=369.99 Aligned_cols=265 Identities=16% Similarity=0.117 Sum_probs=197.6
Q ss_pred ccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCC
Q 002843 196 LSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKP 274 (874)
Q Consensus 196 ~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~ 274 (874)
|++..+.. +.|.+++| |.||+|...+......+...+++.++............|..++....|||+
T Consensus 10 I~r~~~~l~~~lG~G~f------------G~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnI 77 (299)
T 4asz_A 10 IKRHNIVLKRELGEGAF------------GKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77 (299)
T ss_dssp CCGGGEEEEEEEEC--C------------CCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTB
T ss_pred cCHHHeEEeeEEeeCCC------------cEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCC
Confidence 44555554 66777655 668888532111111122333344443333334456778889999999999
Q ss_pred ceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC------------CCCCHHHHHHHHHHHHHHH
Q 002843 275 VGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------------HKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~------------~~lse~e~~~I~~QIl~aL 342 (874)
|.++.....+... +++||||+||+|.++|.+.+ ..+++.+++.|+.||+.||
T Consensus 78 V~l~g~~~~~~~~----------------~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl 141 (299)
T 4asz_A 78 VKFYGVCVEGDPL----------------IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGM 141 (299)
T ss_dssp CCEEEEECSSSSE----------------EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHH
T ss_pred ccEEEEEeeCCEE----------------EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 9999876643332 56999999999999997642 3699999999999999999
Q ss_pred HHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 343 ~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
+|||+++||||||||+||||+.++.+||+|||+++.......
T Consensus 142 ~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~-------------------------------------- 183 (299)
T 4asz_A 142 VYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY-------------------------------------- 183 (299)
T ss_dssp HHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC--------------------------------------
T ss_pred HHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCc--------------------------------------
Confidence 999999999999999999999999999999999985431100
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
........||+.|||||
T Consensus 184 ---------------------------------------------------------------~~~~~~~~gt~~ymAPE 200 (299)
T 4asz_A 184 ---------------------------------------------------------------YRVGGHTMLPIRWMPPE 200 (299)
T ss_dssp ---------------------------------------------------------------EEETTTEEECGGGCCHH
T ss_pred ---------------------------------------------------------------eeecCceecChhhcCHH
Confidence 00002457899999999
Q ss_pred cccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHH
Q 002843 503 ELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (874)
Q Consensus 503 vl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~Ei 579 (874)
++.+..|+.++|||||||+||||+| |..||.. ....+..+..+..++.....++.+.+||.+||+.||++|||+.||
T Consensus 201 ~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i 280 (299)
T 4asz_A 201 SIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGI 280 (299)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence 9999999999999999999999998 8999853 233455565555555445566889999999999999999999999
Q ss_pred hhhHHHHhhHhh
Q 002843 580 LQSEVTNEFQEV 591 (874)
Q Consensus 580 L~hp~~~~~~~~ 591 (874)
++|++.+...
T Consensus 281 --~~~L~~~~~~ 290 (299)
T 4asz_A 281 --HTLLQNLAKA 290 (299)
T ss_dssp --HHHHHHHHHH
T ss_pred --HHHHHHHHhc
Confidence 6788776543
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=381.64 Aligned_cols=207 Identities=16% Similarity=0.107 Sum_probs=164.0
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+..++....||++|.++.....++.. +++||||+||+|.++|++.+ .+++.+++.|+.||+.
T Consensus 99 ~E~~il~~l~HpnIV~l~~~~~~~~~~----------------~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~ 161 (336)
T 4g3f_A 99 EELVACAGLSSPRIVPLYGAVREGPWV----------------NIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALE 161 (336)
T ss_dssp HHHHTTTTCCCTTBCCEEEEEEETTEE----------------EEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCcEEEEEEECCEE----------------EEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHH
Confidence 356678888999999999887655443 45999999999999998876 7999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCC-cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~-~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
||+|||++|||||||||+||||+.+| ++||+|||+|+.+..... .
T Consensus 162 aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~-----------------------~----------- 207 (336)
T 4g3f_A 162 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL-----------------------G----------- 207 (336)
T ss_dssp HHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------------------------------------
T ss_pred HHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc-----------------------c-----------
Confidence 99999999999999999999999887 699999999985431100 0
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.........+||+.||
T Consensus 208 ----------------------------------------------------------------~~~~~~~~~~GT~~Ym 223 (336)
T 4g3f_A 208 ----------------------------------------------------------------KSLLTGDYIPGTETHM 223 (336)
T ss_dssp ----------------------------------------------------------------------CCCCCCGGGC
T ss_pred ----------------------------------------------------------------cceecCCccccCcccc
Confidence 0000013468999999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCC--CCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lp--p~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
|||++.+..|+.++|||||||+||||++|.+||.... ..+..+.....+ ......++.+.+||.+||++||.+|||
T Consensus 224 APE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s 303 (336)
T 4g3f_A 224 APEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRAS 303 (336)
T ss_dssp CHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred CHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcC
Confidence 9999999999999999999999999999999985421 122333333222 122345678999999999999999999
Q ss_pred hhHHhhh
Q 002843 576 TREILQS 582 (874)
Q Consensus 576 a~EiL~h 582 (874)
+.|+++|
T Consensus 304 a~el~~~ 310 (336)
T 4g3f_A 304 AMELRRK 310 (336)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998543
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=364.49 Aligned_cols=234 Identities=15% Similarity=0.097 Sum_probs=176.5
Q ss_pred ceEEEecCCCCcccccccccccccccccCCC--hhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCcccc
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (874)
+|.||+|...+ ..+++.++.... ........+..++....|||+|.++.... +++
T Consensus 49 fG~Vy~~~~~~--------~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~-------------- 105 (307)
T 3omv_A 49 FGTVYKGKWHG--------DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDN-------------- 105 (307)
T ss_dssp SSEEEEEESSS--------EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS--------------
T ss_pred CcEEEEEEECC--------cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCe--------------
Confidence 46788886421 123333333222 22344567888999999999999886432 221
Q ss_pred CCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 301 ~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
.++|||||+||+|.++|......+++.+++.|+.||+.||+|||+++||||||||+||||+.++.+||+|||+|+...
T Consensus 106 --~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 183 (307)
T 3omv_A 106 --LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp --CEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred --EEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence 257999999999999998765589999999999999999999999999999999999999999999999999997433
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
....
T Consensus 184 ~~~~---------------------------------------------------------------------------- 187 (307)
T 3omv_A 184 RWSG---------------------------------------------------------------------------- 187 (307)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCc----------------------------------------------------------------------------
Confidence 0000
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC---CCCCCccchhHHHHHHHHhcCCCCchHH---
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLFFELFGRFDSERA--- 534 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g---~~ys~kSDIwSLGVIL~ELltG~~p~~~--- 534 (874)
.......+||+.|||||++.+ ++|+.++|||||||+||||+||..||..
T Consensus 188 -------------------------~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~ 242 (307)
T 3omv_A 188 -------------------------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN 242 (307)
T ss_dssp -------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred -------------------------ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh
Confidence 001135689999999999964 4699999999999999999999999853
Q ss_pred HHHHHHHhhcCCCCCC----CCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 535 LAAAMSDLRDRILPPS----FLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 535 ~~~~~~~l~~~~lpp~----~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.......+.....+|. ....++.+.+||.+||+.||++|||+.||+++
T Consensus 243 ~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 294 (307)
T 3omv_A 243 RDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS 294 (307)
T ss_dssp HHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 2333444444444333 23445779999999999999999999999876
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=368.15 Aligned_cols=244 Identities=15% Similarity=0.058 Sum_probs=181.4
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
|+|.||+|...+..........+++.++............|..++....|||+|.++.....+...
T Consensus 53 ~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~-------------- 118 (329)
T 4aoj_A 53 AFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL-------------- 118 (329)
T ss_dssp SSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE--------------
T ss_pred CCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE--------------
Confidence 447799986432222212233444445444444445567788899999999999999876533332
Q ss_pred CCceEeeccCCCCHHHHHHhCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCc
Q 002843 302 GGLRQGSSDHGVNLREWLNARG--------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~--------------~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~ 367 (874)
++|||||+||+|.++|.+.. ..+++.+++.|+.||+.||+|||+++||||||||+||||+.++.
T Consensus 119 --~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 119 --LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp --EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE
T ss_pred --EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCc
Confidence 56999999999999997642 25999999999999999999999999999999999999999999
Q ss_pred EEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccc
Q 002843 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (874)
Q Consensus 368 vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~ 447 (874)
+||+|||+++.+.....
T Consensus 197 ~Ki~DFGla~~~~~~~~--------------------------------------------------------------- 213 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDY--------------------------------------------------------------- 213 (329)
T ss_dssp EEECCCC-------------------------------------------------------------------------
T ss_pred EEEcccccceeccCCCc---------------------------------------------------------------
Confidence 99999999985431000
Q ss_pred cccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC
Q 002843 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (874)
Q Consensus 448 ~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt 527 (874)
....+..+||+.|||||++.+..|+.++|||||||+||||+|
T Consensus 214 --------------------------------------~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt 255 (329)
T 4aoj_A 214 --------------------------------------YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255 (329)
T ss_dssp --------------------------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------------ceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHc
Confidence 000134578999999999999999999999999999999998
Q ss_pred -CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 528 -RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 528 -G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
|..||.. ....+..+..+..++......+.+.+||.+||+.||++|||+.||+++
T Consensus 256 ~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~ 313 (329)
T 4aoj_A 256 YGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313 (329)
T ss_dssp TSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 8999843 233445555544444444566889999999999999999999999764
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=362.48 Aligned_cols=258 Identities=17% Similarity=0.145 Sum_probs=191.2
Q ss_pred ccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCC-ChhHHHHHHHHhHHhhcCCCC
Q 002843 196 LSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPK 273 (874)
Q Consensus 196 ~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~l~~~~~~~~ 273 (874)
++...++. +.|.+|+ +|.||||.+............+++.++... .........+..++....|||
T Consensus 23 i~~~~~~~~~~lG~G~------------fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpN 90 (308)
T 4gt4_A 23 ISLSAVRFMEELGEDR------------FGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPN 90 (308)
T ss_dssp CCGGGEEEEEEEEECS------------SCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTT
T ss_pred CCHHHCeEeeEeccCC------------CcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCC
Confidence 33444444 5566654 477888863111111112223333333322 222344667778899999999
Q ss_pred CceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------------CCCCHHHHHHHHHHH
Q 002843 274 PVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQI 338 (874)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---------------~~lse~e~~~I~~QI 338 (874)
+|.++.....++. .++|||||+||+|.++|..+. ..+++.+++.|+.||
T Consensus 91 IV~l~g~~~~~~~----------------~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 154 (308)
T 4gt4_A 91 VVCLLGVVTKDQP----------------LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQI 154 (308)
T ss_dssp BCCEEEEECSSSS----------------CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHH
T ss_pred CCCcceEEEECCE----------------EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHH
Confidence 9999987654333 257999999999999996532 259999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||+++||||||||+||||+.++.+||+|||+++.+.....
T Consensus 155 a~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~---------------------------------- 200 (308)
T 4gt4_A 155 AAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY---------------------------------- 200 (308)
T ss_dssp HHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGC----------------------------------
T ss_pred HHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCc----------------------------------
Confidence 9999999999999999999999999999999999999985431000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
....+..+||+.|
T Consensus 201 -------------------------------------------------------------------~~~~~~~~gt~~y 213 (308)
T 4gt4_A 201 -------------------------------------------------------------------YKLLGNSLLPIRW 213 (308)
T ss_dssp -------------------------------------------------------------------BCSSSSSCBCGGG
T ss_pred -------------------------------------------------------------------eeEecccccCCcc
Confidence 0001356799999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
||||++.++.|+.++|||||||+||||+| |..||.. ....+..+..+..++......+.+.+||.+||+.||++|||
T Consensus 214 mAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs 293 (308)
T 4gt4_A 214 MAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPR 293 (308)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred cCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcC
Confidence 99999999999999999999999999998 8888843 23345566666665555566788999999999999999999
Q ss_pred hhHHhhh
Q 002843 576 TREILQS 582 (874)
Q Consensus 576 a~EiL~h 582 (874)
+.||+++
T Consensus 294 ~~ei~~~ 300 (308)
T 4gt4_A 294 FKDIHSR 300 (308)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999765
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-40 Score=365.46 Aligned_cols=259 Identities=16% Similarity=0.130 Sum_probs=189.7
Q ss_pred ccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCCC-hhHHHHHHHHhHHhhcCC-C
Q 002843 196 LSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNAS-P 272 (874)
Q Consensus 196 ~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~l~~~~~~-~ 272 (874)
++++.+.. +.|.+++| |.||+|.....-...-....+++.+..... .+......+...+....| |
T Consensus 61 i~~~~~~l~~~LG~G~f------------G~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhp 128 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAF------------GQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 128 (353)
T ss_dssp CCGGGEEEEEEEEECSS------------EEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCT
T ss_pred ecHHHeEEeeEEecCCC------------eEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCC
Confidence 45666666 77888765 668887521100000111223333333222 223345556666666655 8
Q ss_pred CCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC---------------CCCCCHHHHHHHHHH
Q 002843 273 KPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---------------GHKGKRIECLYIFRQ 337 (874)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~---------------~~~lse~e~~~I~~Q 337 (874)
++|.++.....++.. .+++||||+||+|.++|+.. ...+++.+++.|+.|
T Consensus 129 nIV~l~g~~~~~~~~---------------~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 193 (353)
T 4ase_A 129 NVVNLLGACTKPGGP---------------LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 193 (353)
T ss_dssp TBCCEEEEECCTTSC---------------CEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHH
T ss_pred cEEEEEEEEEecCCE---------------EEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHH
Confidence 899998875433322 25799999999999999753 125899999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||+++||||||||+|||++.++.+||+|||+|+.+..+..
T Consensus 194 ia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~--------------------------------- 240 (353)
T 4ase_A 194 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD--------------------------------- 240 (353)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTT---------------------------------
T ss_pred HHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCCC---------------------------------
Confidence 99999999999999999999999999999999999999985431000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
....+..+||+.
T Consensus 241 --------------------------------------------------------------------~~~~~~~~gt~~ 252 (353)
T 4ase_A 241 --------------------------------------------------------------------YVRKGDARLPLK 252 (353)
T ss_dssp --------------------------------------------------------------------SEEETTEEECGG
T ss_pred --------------------------------------------------------------------ceeecccccccc
Confidence 001135678999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH---HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA---LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~---~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
|||||++.+..|+.++|||||||+||||+| |..||.. .......+..+..++......+.+.+||.+||+.||++|
T Consensus 253 ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~R 332 (353)
T 4ase_A 253 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR 332 (353)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred ccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHC
Confidence 999999999999999999999999999998 8999854 233445555555554445567889999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
||+.||++|
T Consensus 333 Pt~~eil~~ 341 (353)
T 4ase_A 333 PTFSELVEH 341 (353)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 999999988
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-40 Score=367.37 Aligned_cols=236 Identities=17% Similarity=0.148 Sum_probs=160.8
Q ss_pred HHHHHhHHhh-cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVAS-NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
...+...+.. ..||+++.+......+... +++||||+||+|.++++ .+++.+++.|++|
T Consensus 66 ~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~----------------~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~q 125 (361)
T 4f9c_A 66 IAAELQCLTVAGGQDNVMGVKYCFRKNDHV----------------VIAMPYLEHESFLDILN----SLSFQEVREYMLN 125 (361)
T ss_dssp HHHHHHHHHHTCSBTTBCCCSEEEEETTEE----------------EEEEECCCCCCHHHHHT----TCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCceEEEEEEECCEE----------------EEEEeCCCcccHHHHHc----CCCHHHHHHHHHH
Confidence 3344444444 4799999998877654443 46999999999999994 5999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecC-CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQS-NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~-~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
|+.||+|||++|||||||||+|||++.+ +.+||+|||+|+...+... ...+|...... ...
T Consensus 126 ll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~----------------~~~~~~~~~~~--~~~ 187 (361)
T 4f9c_A 126 LFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI----------------ELLKFVQSEAQ--QER 187 (361)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC----------------GGGGGC----------
T ss_pred HHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc----------------ccccccccccc--ccc
Confidence 9999999999999999999999999877 8999999999985542111 00000000000 000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
... + .+..........+..+||+
T Consensus 188 ~~~------------------------~---------------------------------~~~~~~~~~~~~~~~~GT~ 210 (361)
T 4f9c_A 188 CSQ------------------------N---------------------------------KCSICLSRRQQVAPRAGTP 210 (361)
T ss_dssp ---------------------------------------------------------------------------CCCCG
T ss_pred ccc------------------------c---------------------------------cccccccccccccccccCc
Confidence 000 0 0000000011235679999
Q ss_pred cccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHH---HHHHHHHh------------------------------
Q 002843 497 WYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERA---LAAAMSDL------------------------------ 542 (874)
Q Consensus 497 ~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~---~~~~~~~l------------------------------ 542 (874)
+|||||++.+.+ |+.++||||+|||||||++|..||.. ....+..+
T Consensus 211 ~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~ 290 (361)
T 4f9c_A 211 GFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQD 290 (361)
T ss_dssp GGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCC
T ss_pred cccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchh
Confidence 999999998865 89999999999999999999998821 00001000
Q ss_pred --------hc--C-------------CCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 543 --------RD--R-------------ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 543 --------~~--~-------------~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+. . ...+.+...++.+.|||.+||.+||++|||+.|+|+||||+++.
T Consensus 291 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~ 360 (361)
T 4f9c_A 291 LRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS 360 (361)
T ss_dssp HHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred hhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence 00 0 00112334567789999999999999999999999999998753
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=369.31 Aligned_cols=225 Identities=15% Similarity=0.184 Sum_probs=170.8
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
..+...+..+++...||++|.+++......... .....++|||||+ |+|.++|.+.+ .+++.+++.|+
T Consensus 97 ~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~----------~~~~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~ 164 (398)
T 4b99_A 97 AKRTLRELKILKHFKHDNIIAIKDILRPTVPYG----------EFKSVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFL 164 (398)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTT----------TCCCEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcceEeeeeecccccc----------cCCEEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHH
Confidence 344567788899999999999987644221100 0011368999997 68999998776 79999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
+||+.||+|||++|||||||||+|||++.++.+||+|||+++.+..+..
T Consensus 165 ~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~------------------------------- 213 (398)
T 4b99_A 165 YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA------------------------------- 213 (398)
T ss_dssp HHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC------------------------------------
T ss_pred HHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCcc-------------------------------
Confidence 9999999999999999999999999999999999999999975431100
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
......+..+||
T Consensus 214 --------------------------------------------------------------------~~~~~~~~~~GT 225 (398)
T 4b99_A 214 --------------------------------------------------------------------EHQYFMTEYVAT 225 (398)
T ss_dssp ----------------------------------------------------------------------CCCCCSSCCC
T ss_pred --------------------------------------------------------------------ccccccccceeC
Confidence 000011467999
Q ss_pred ccccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc---C-------------------CCCCC
Q 002843 496 KWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD---R-------------------ILPPS 550 (874)
Q Consensus 496 ~~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~---~-------------------~lpp~ 550 (874)
++|||||++.+.. |+.++||||||||||||++|.+||... ...+..+.. . .+++.
T Consensus 226 ~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~ 305 (398)
T 4b99_A 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPR 305 (398)
T ss_dssp CTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCC
T ss_pred hHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCc
Confidence 9999999998854 699999999999999999999998321 111222211 0 01111
Q ss_pred --------CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 551 --------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 551 --------~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
+...++.+.+||.+||.+||++|||+.|+|+||||+...+.
T Consensus 306 ~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~p 354 (398)
T 4b99_A 306 QPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDP 354 (398)
T ss_dssp CCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCCG
T ss_pred CCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCCC
Confidence 22346778999999999999999999999999999976543
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=379.34 Aligned_cols=208 Identities=17% Similarity=0.131 Sum_probs=170.3
Q ss_pred HhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Q 002843 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL 342 (874)
..++....||++|.++.....+... ++|||||+||+|.++|.+.+ .|++.+++.|+.||+.||
T Consensus 243 l~ll~~~~HP~IV~l~~~f~~~~~l----------------ylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL 305 (689)
T 3v5w_A 243 LSLVSTGDCPFIVCMSYAFHTPDKL----------------SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGL 305 (689)
T ss_dssp HHHHSSSCCTTBCCEEEEEECSSEE----------------EEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCEeEEEEEEEECCEE----------------EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 3566777899999999887755554 45999999999999998876 799999999999999999
Q ss_pred HHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 343 ~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
+|||++|||||||||+||||+.+|++||+|||+|+.+...
T Consensus 306 ~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~---------------------------------------- 345 (689)
T 3v5w_A 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---------------------------------------- 345 (689)
T ss_dssp HHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC----------------------------------------
T ss_pred HHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC----------------------------------------
Confidence 9999999999999999999999999999999998743200
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
...+.+||+.|||||
T Consensus 346 -----------------------------------------------------------------~~~t~~GTp~YmAPE 360 (689)
T 3v5w_A 346 -----------------------------------------------------------------KPHASVGTHGYMAPE 360 (689)
T ss_dssp -----------------------------------------------------------------CCCSCCSCGGGCCHH
T ss_pred -----------------------------------------------------------------CCCCccCCcCccCHH
Confidence 003568999999999
Q ss_pred cccC-CCCCCccchhHHHHHHHHhcCCCCchHHH-----HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC-
Q 002843 503 ELSG-GVCTTSSNIYSLGVLFFELFGRFDSERAL-----AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT- 575 (874)
Q Consensus 503 vl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~-----~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT- 575 (874)
++.+ ..|+.++||||||||||||++|.+||... ......+....+ ......++.+.+||.+||..||.+|++
T Consensus 361 vl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~-~~p~~~S~~a~dLI~~lL~~dP~~Rl~~ 439 (689)
T 3v5w_A 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-ELPDSFSPELRSLLEGLLQRDVNRRLGC 439 (689)
T ss_dssp HHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHTCSCGGGCTTC
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC-CCCccCCHHHHHHHHHHccCCHhHCCCC
Confidence 9975 57999999999999999999999999432 122222222111 112235688999999999999999998
Q ss_pred ----hhHHhhhHHHHhhHhhhh
Q 002843 576 ----TREILQSEVTNEFQEVCA 593 (874)
Q Consensus 576 ----a~EiL~hp~~~~~~~~~~ 593 (874)
+.||++||||+++.+...
T Consensus 440 ~~~ga~ei~~HpfF~~idW~~l 461 (689)
T 3v5w_A 440 LGRGAQEVKESPFFRSLDWQMV 461 (689)
T ss_dssp SSSTHHHHTTSGGGTTCCHHHH
T ss_pred CCCCHHHHhcCccccCCCHHHH
Confidence 799999999998876543
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=347.74 Aligned_cols=240 Identities=14% Similarity=0.093 Sum_probs=168.8
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
|+|.||||.. +++..+++.+..+...+ ....++...+....|||++.++.....++... .
T Consensus 15 ~fG~Vy~~~~-------~g~~VAvK~l~~~~~~~-~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~------------~ 74 (303)
T 3hmm_A 15 RFGEVWRGKW-------RGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADNKDNGTW------------T 74 (303)
T ss_dssp SSSEEEEEEE-------TTEEEEEEEECGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSS------------E
T ss_pred CCeEEEEEEE-------CCEEEEEEEECccchhh-HHHHHHHHHHhcCCCCCCCcEEEEEEecCCCc------------e
Confidence 4477888863 23334444444332111 11223444556678999999988766443211 0
Q ss_pred CCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCcccCCCCCceEEecCCcEEEecc
Q 002843 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ--------GVTFLDLKPSSFKLLQSNQVKYIGP 373 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~--------gIIHRDLKPsNILL~~~~~vKLiDF 373 (874)
..++|||||+||+|.++|+.. .+++.+++.|+.||+.||+|||++ +||||||||+||||+.++.+||+||
T Consensus 75 ~~~lV~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 75 QLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 126799999999999999876 599999999999999999999987 9999999999999999999999999
Q ss_pred ccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCC
Q 002843 374 IIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPH 453 (874)
Q Consensus 374 Glar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 453 (874)
|+++....... +
T Consensus 153 Gla~~~~~~~~-------------------------------------------------------~------------- 164 (303)
T 3hmm_A 153 GLAVRHDSATD-------------------------------------------------------T------------- 164 (303)
T ss_dssp TTCEEEETTTT-------------------------------------------------------E-------------
T ss_pred CCCccccCCCC-------------------------------------------------------c-------------
Confidence 99875431000 0
Q ss_pred CCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC------CCCCccchhHHHHHHHHhcC
Q 002843 454 SHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG------VCTTSSNIYSLGVLFFELFG 527 (874)
Q Consensus 454 ~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~------~ys~kSDIwSLGVIL~ELlt 527 (874)
........+||++|||||++.+. .|+.++|||||||+||||+|
T Consensus 165 -------------------------------~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~t 213 (303)
T 3hmm_A 165 -------------------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213 (303)
T ss_dssp -------------------------------ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHH
Confidence 00001356899999999999764 36789999999999999999
Q ss_pred CCCchH-----------------HHHHHHHHhhcCCCCCCCCCCC------HHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 528 RFDSER-----------------ALAAAMSDLRDRILPPSFLSEN------PKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 528 G~~p~~-----------------~~~~~~~~l~~~~lpp~~~~~~------p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
|.+|+. ........+....+.|.++... ..+.+|+.+||+.||++|||+.||++.
T Consensus 214 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 291 (303)
T 3hmm_A 214 RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp TBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred CCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 866531 1122233334444444433221 347899999999999999999999864
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=375.87 Aligned_cols=243 Identities=19% Similarity=0.170 Sum_probs=189.2
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (874)
+|+||++.. ... ++..+.+.+......+......+..++....||+++.+++....++..
T Consensus 170 fg~V~~~~~----~~t-g~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~--------------- 229 (573)
T 3uto_A 170 FGVVHRVTE----RAT-GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM--------------- 229 (573)
T ss_dssp TEEEEEEEE----TTT-CCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEE---------------
T ss_pred CeEEEEEEE----CCC-CCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE---------------
Confidence 367887751 111 122233334444344555556677888999999999999887755443
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC--CcEEEeccccchhcc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS--NQVKYIGPIIQKETL 380 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~--~~vKLiDFGlar~~~ 380 (874)
+++||||+||+|.++|......|++.++..|++||+.||+|||++||+||||||+|||++.+ +.+||+|||+++.+.
T Consensus 230 -~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 230 -VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp -EEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred -EEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 45999999999999997654479999999999999999999999999999999999999854 899999999987433
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
..
T Consensus 309 ~~------------------------------------------------------------------------------ 310 (573)
T 3uto_A 309 PK------------------------------------------------------------------------------ 310 (573)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 00
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHH
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAA 538 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~ 538 (874)
......+||++|||||++.+..|+.++||||||||||||++|.+||.. ....
T Consensus 311 --------------------------~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~ 364 (573)
T 3uto_A 311 --------------------------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET 364 (573)
T ss_dssp --------------------------SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH
T ss_pred --------------------------CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH
Confidence 001356899999999999999999999999999999999999999843 2333
Q ss_pred HHHhhcCCC---CCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 539 MSDLRDRIL---PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 539 ~~~l~~~~l---pp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
+..+..... ++.+...++.+.+||.+||+.||.+|||+.|+|+||||+....
T Consensus 365 ~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 365 LRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp HHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred HHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence 444544322 2334556788999999999999999999999999999986543
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=318.62 Aligned_cols=215 Identities=14% Similarity=0.118 Sum_probs=171.3
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
......+..++....||+++.+++........ +++||||+|++|.+++... .+++.+++.++
T Consensus 61 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~ 122 (297)
T 3fxz_A 61 KELIINEILVMRENKNPNIVNYLDSYLVGDEL----------------WVVMEYLAGGSLTDVVTET--CMDEGQIAAVC 122 (297)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE----------------EEEEECCTTCBHHHHHHHS--CCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEE----------------EEEEECCCCCCHHHHHhhc--CCCHHHHHHHH
Confidence 34455666788889999999998876644332 5699999999999999876 59999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 123 ~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------------------------------- 170 (297)
T 3fxz_A 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-------------------------------- 170 (297)
T ss_dssp HHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--------------------------------
T ss_pred HHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc--------------------------------
Confidence 999999999999999999999999999999999999999886332000
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
.......||
T Consensus 171 -----------------------------------------------------------------------~~~~~~~gt 179 (297)
T 3fxz_A 171 -----------------------------------------------------------------------SKRSTMVGT 179 (297)
T ss_dssp -----------------------------------------------------------------------CCBCCCCSC
T ss_pred -----------------------------------------------------------------------cccCCccCC
Confidence 001345789
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHh-hcCCCC-CCCCCCCHHHHHHHHHccccCCC
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDL-RDRILP-PSFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l-~~~~lp-p~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
+.|+|||++.+..|+.++|||||||++|||++|..||..... ....+ ...... ......++.+.+||.+||+.||.
T Consensus 180 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 259 (297)
T 3fxz_A 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVE 259 (297)
T ss_dssp GGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTT
T ss_pred cCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChh
Confidence 999999999999999999999999999999999999843211 11122 222211 12223456789999999999999
Q ss_pred CCCChhHHhhhHHHHhhHhh
Q 002843 572 SRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~~~~~~ 591 (874)
+|||+.|+|+||||+.....
T Consensus 260 ~Rps~~ell~h~~~~~~~~~ 279 (297)
T 3fxz_A 260 KRGSAKELLQHQFLKIAKPL 279 (297)
T ss_dssp TSCCHHHHTTCGGGGGCCCG
T ss_pred HCcCHHHHhhChhhcccCcc
Confidence 99999999999999865543
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=323.30 Aligned_cols=194 Identities=26% Similarity=0.398 Sum_probs=157.2
Q ss_pred CceEeeccCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 303 GLRQGSSDHGVNLREWLNARGH--KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~--~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
.+++||||+|++|.+++..... ..++..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 215 (332)
T 3qd2_B 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 215 (332)
T ss_dssp EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccc
Confidence 4789999999999999987542 45667799999999999999999999999999999999999999999999987544
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
........ .
T Consensus 216 ~~~~~~~~----------------------------------------------------~------------------- 224 (332)
T 3qd2_B 216 QDEEEQTV----------------------------------------------------L------------------- 224 (332)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred cchhhccc----------------------------------------------------c-------------------
Confidence 11000000 0
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHH
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMS 540 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~ 540 (874)
.............||+.|+|||++.+..++.++|||||||++|||++|+.|+........
T Consensus 225 --------------------~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~ 284 (332)
T 3qd2_B 225 --------------------TPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIIT 284 (332)
T ss_dssp ---------------------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHH
T ss_pred --------------------ccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHH
Confidence 000000111456899999999999999999999999999999999999999988777777
Q ss_pred HhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 541 ~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
.+.....+..+....+.+.+||.+||++||.+|||+.|+|+||||++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 285 DVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp HHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred HhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 77777666655566678899999999999999999999999999975
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-35 Score=321.41 Aligned_cols=212 Identities=18% Similarity=0.163 Sum_probs=171.0
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
..+...+..++....||+++.++.....++.. +++||||+|++|.+++...+ .+++.+++.++
T Consensus 58 ~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~ 120 (328)
T 3fe3_A 58 LQKLFREVRIMKILNHPNIVKLFEVIETEKTL----------------YLIMEYASGGEVFDYLVAHG-RMKEKEARSKF 120 (328)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE----------------EEEECCCTTCBHHHHHHHHC-CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCEeeEEEEEEECCEE----------------EEEEECCCCCcHHHHHHHcC-CCCHHHHHHHH
Confidence 34455677788888999999998876543332 56999999999999998776 79999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 121 ~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~--------------------------------- 167 (328)
T 3fe3_A 121 RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG--------------------------------- 167 (328)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS---------------------------------
T ss_pred HHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC---------------------------------
Confidence 99999999999999999999999999999999999999998633200
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
......+||
T Consensus 168 -----------------------------------------------------------------------~~~~~~~gt 176 (328)
T 3fe3_A 168 -----------------------------------------------------------------------GKLDAFCGA 176 (328)
T ss_dssp -----------------------------------------------------------------------CGGGTTSSS
T ss_pred -----------------------------------------------------------------------CccccccCC
Confidence 001345789
Q ss_pred ccccCcccccCCCCC-CccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 496 KWYASPEELSGGVCT-TSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys-~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
++|+|||++.+..+. .++|||||||++|||++|..||... ......+.....+ .....++.+.+|+.+||..||.+
T Consensus 177 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dP~~ 255 (328)
T 3fe3_A 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKRFLVLNPIK 255 (328)
T ss_dssp GGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCTTSCHHHHHHHHHHCCSSTTT
T ss_pred cceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-CCCCCCHHHHHHHHHHCCCChhH
Confidence 999999999988875 7999999999999999999998432 2223333332221 11234678999999999999999
Q ss_pred CCChhHHhhhHHHHhhH
Q 002843 573 RPTTREILQSEVTNEFQ 589 (874)
Q Consensus 573 RPTa~EiL~hp~~~~~~ 589 (874)
|||+.|+|+||||+...
T Consensus 256 R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 256 RGTLEQIMKDRWINAGH 272 (328)
T ss_dssp SCCHHHHTTCTTTTTTC
T ss_pred CcCHHHHhcCHhhcCCC
Confidence 99999999999998654
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=329.62 Aligned_cols=214 Identities=18% Similarity=0.135 Sum_probs=174.3
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+++....++.. +++||||+||+|.+++...+ .+++.++..++.
T Consensus 55 ~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~----------------~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~ 117 (444)
T 3soa_A 55 QKLEREARICRLLKHPNIVRLHDSISEEGHH----------------YLIFDLVTGGELFEDIVARE-YYSEADASHCIQ 117 (444)
T ss_dssp HHHHHHHHHHHHCCBTTBCCEEEEEECSSEE----------------EEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcCCCeEEEEEEECCEE----------------EEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHH
Confidence 3455677788888999999998876644433 46999999999999998876 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEec---CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQ---SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~---~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
||+.||+|||++||+||||||+|||++. ++.+||+|||+++.....
T Consensus 118 qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~------------------------------- 166 (444)
T 3soa_A 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE------------------------------- 166 (444)
T ss_dssp HHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT-------------------------------
T ss_pred HHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC-------------------------------
Confidence 9999999999999999999999999984 578999999998643200
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
........
T Consensus 167 ------------------------------------------------------------------------~~~~~~~~ 174 (444)
T 3soa_A 167 ------------------------------------------------------------------------QQAWFGFA 174 (444)
T ss_dssp ------------------------------------------------------------------------CCBCCCSC
T ss_pred ------------------------------------------------------------------------Cceeeccc
Confidence 00013457
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCC---CCCCCCCCCHHHHHHHHHcccc
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRI---LPPSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~---lpp~~~~~~p~l~dLi~~cL~~ 568 (874)
||+.|+|||++.+..|+.++|||||||++|+|++|.+||.. .......+.... ..+.+...++.+.+||.+||++
T Consensus 175 gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~ 254 (444)
T 3soa_A 175 GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTI 254 (444)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCS
T ss_pred CCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCC
Confidence 99999999999998999999999999999999999999832 223344444332 2344556678899999999999
Q ss_pred CCCCCCChhHHhhhHHHHhhHh
Q 002843 569 EPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
||.+|||+.|+|+||||+....
T Consensus 255 dP~~Rpta~e~L~hp~~~~~~~ 276 (444)
T 3soa_A 255 NPSKRITAAEALKHPWISHRST 276 (444)
T ss_dssp STTTSCCHHHHHHSCTTHHHHH
T ss_pred ChhHCCCHHHHhcCccccCCcc
Confidence 9999999999999999987543
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-35 Score=324.98 Aligned_cols=213 Identities=14% Similarity=0.157 Sum_probs=167.4
Q ss_pred HHHHHhHHhh-cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVAS-NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
...+..++.. ..||+++.+.......... +++||||+||+|.+++.+.+ .+++.+++.|+.|
T Consensus 70 ~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~----------------~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~q 132 (353)
T 3txo_A 70 TMTEKRILSLARNHPFLTQLFCCFQTPDRL----------------FFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAE 132 (353)
T ss_dssp HHHHHHHHHHTTTCTTBCCEEEEEECSSEE----------------EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCceeeEEEEEEeCCEE----------------EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHH
Confidence 3344444444 4799999988876544332 56999999999999998765 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+||||+.++.+||+|||+++.....
T Consensus 133 i~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~----------------------------------- 177 (353)
T 3txo_A 133 IISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN----------------------------------- 177 (353)
T ss_dssp HHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC------------------------------------
T ss_pred HHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccC-----------------------------------
Confidence 999999999999999999999999999999999999998632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......+||+.
T Consensus 178 --------------------------------------------------------------------~~~~~~~~gt~~ 189 (353)
T 3txo_A 178 --------------------------------------------------------------------GVTTATFCGTPD 189 (353)
T ss_dssp ----------------------------------------------------------------------------CCGG
T ss_pred --------------------------------------------------------------------CccccccCCCcC
Confidence 000135689999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcC-CCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDR-ILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~-~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||++.+..|+.++|||||||++|||++|..||.. ....+..+... ...|. ...+.+.+||.+||..||.+||
T Consensus 190 y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dP~~R~ 267 (353)
T 3txo_A 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--WLHEDATGILKSFMTKNPTMRL 267 (353)
T ss_dssp GCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGST
T ss_pred eEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhhCHHHcc
Confidence 9999999988899999999999999999999999842 22233344332 22222 2457789999999999999999
Q ss_pred Ch------hHHhhhHHHHhhHhhhh
Q 002843 575 TT------REILQSEVTNEFQEVCA 593 (874)
Q Consensus 575 Ta------~EiL~hp~~~~~~~~~~ 593 (874)
++ .|+++||||+++.+...
T Consensus 268 ~~~~~~~~~~il~hp~f~~~~w~~l 292 (353)
T 3txo_A 268 GSLTQGGEHAILRHPFFKEIDWAQL 292 (353)
T ss_dssp TSGGGTCTHHHHTSGGGTTCCHHHH
T ss_pred CCcccCCHHHHhhCCcccCCCHHHH
Confidence 99 89999999998876543
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-35 Score=319.22 Aligned_cols=214 Identities=17% Similarity=0.180 Sum_probs=172.6
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYI 334 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I 334 (874)
+......+...+....||+++.+.......... +++||||+|++|.+++......+++.+++.|
T Consensus 44 ~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~----------------~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i 107 (321)
T 1tki_A 44 DQVLVKKEISILNIARHRNILHLHESFESMEEL----------------VMIFEFISGLDIFERINTSAFELNEREIVSY 107 (321)
T ss_dssp HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEE----------------EEEECCCCCCBHHHHHTSSSCCCCHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEE----------------EEEEEeCCCCCHHHHHHhcCCCCCHHHHHHH
Confidence 333445566778888999999998876544332 4699999999999999876557999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEec--CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQ--SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~--~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
+.||+.||.|||++||+||||||+|||++. ++.+||+|||+++.....
T Consensus 108 ~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~------------------------------ 157 (321)
T 1tki_A 108 VHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG------------------------------ 157 (321)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT------------------------------
T ss_pred HHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC------------------------------
Confidence 999999999999999999999999999987 789999999998643200
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
......
T Consensus 158 --------------------------------------------------------------------------~~~~~~ 163 (321)
T 1tki_A 158 --------------------------------------------------------------------------DNFRLL 163 (321)
T ss_dssp --------------------------------------------------------------------------CEEEEE
T ss_pred --------------------------------------------------------------------------Cccccc
Confidence 001345
Q ss_pred cccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCC---CCCCCCHHHHHHHHHccc
Q 002843 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPP---SFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 493 ~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp---~~~~~~p~l~dLi~~cL~ 567 (874)
.||+.|+|||++.+..++.++|||||||++|+|++|..||.. ....+..+....... .+...++.+.+||.+||.
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~ 243 (321)
T 1tki_A 164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLV 243 (321)
T ss_dssp ESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSC
T ss_pred cCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcC
Confidence 789999999999998899999999999999999999999832 222334443332221 234556789999999999
Q ss_pred cCCCCCCChhHHhhhHHHHhh
Q 002843 568 PEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~~~~ 588 (874)
+||.+|||+.|+|+||||+..
T Consensus 244 ~dp~~Rpt~~e~l~hp~~~~~ 264 (321)
T 1tki_A 244 KERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp SSGGGSCCHHHHHHSHHHHSC
T ss_pred CChhHCcCHHHHhcChhhccC
Confidence 999999999999999999864
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-34 Score=317.71 Aligned_cols=212 Identities=17% Similarity=0.167 Sum_probs=171.1
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++.....++.. +++||||+|++|.+++...+ .+++.+++.++.
T Consensus 73 ~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~----------------~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~ 135 (362)
T 2bdw_A 73 QKLEREARICRKLQHPNIVRLHDSIQEESFH----------------YLVFDLVTGGELFEDIVARE-FYSEADASHCIQ 135 (362)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEEECSSEE----------------EEEECCCCSCBHHHHHTTCS-CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE----------------EEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHH
Confidence 3455667788888999999998876544332 46999999999999998765 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCC---cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSN---QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~---~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
||+.||+|||++||+||||||+|||++.++ .+||+|||+++.....
T Consensus 136 qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~------------------------------- 184 (362)
T 2bdw_A 136 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS------------------------------- 184 (362)
T ss_dssp HHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC-------------------------------
T ss_pred HHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC-------------------------------
Confidence 999999999999999999999999998654 5999999998632200
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
.......
T Consensus 185 -------------------------------------------------------------------------~~~~~~~ 191 (362)
T 2bdw_A 185 -------------------------------------------------------------------------EAWHGFA 191 (362)
T ss_dssp -------------------------------------------------------------------------CSCCCSC
T ss_pred -------------------------------------------------------------------------cccccCC
Confidence 0002457
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCC---CCCCCCCCHHHHHHHHHcccc
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRIL---PPSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~l---pp~~~~~~p~l~dLi~~cL~~ 568 (874)
||+.|+|||++.+..|+.++|||||||++|+|++|.+||.. .......+..... .+.+....+.+.+||.+||.+
T Consensus 192 gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 271 (362)
T 2bdw_A 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTV 271 (362)
T ss_dssp SCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCS
T ss_pred CCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCC
Confidence 89999999999998999999999999999999999999832 2233344443322 223345567899999999999
Q ss_pred CCCCCCChhHHhhhHHHHhhH
Q 002843 569 EPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~~~ 589 (874)
||.+||++.|+|+||||....
T Consensus 272 dP~~R~t~~e~l~hp~~~~~~ 292 (362)
T 2bdw_A 272 NPKKRITADQALKVPWICNRE 292 (362)
T ss_dssp SGGGSCCHHHHTTSHHHHTHH
T ss_pred ChhhCcCHHHHhcCcccCCCc
Confidence 999999999999999998654
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=324.39 Aligned_cols=213 Identities=16% Similarity=0.191 Sum_probs=172.0
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+.......... +++||||+||+|.++|...+ .+++.+++.|+.
T Consensus 60 ~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~----------------~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~ 122 (361)
T 2yab_A 60 EEIEREVSILRQVLHPNIITLHDVYENRTDV----------------VLILELVSGGELFDFLAQKE-SLSEEEATSFIK 122 (361)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEEEEECSSEE----------------EEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE----------------EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHH
Confidence 4455666778888899999998876533322 56999999999999998765 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCC----cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSN----QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~----~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
||+.||.|||++||+||||||+|||++.++ .+||+|||+++.....
T Consensus 123 qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~------------------------------ 172 (361)
T 2yab_A 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG------------------------------ 172 (361)
T ss_dssp HHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTT------------------------------
T ss_pred HHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCC------------------------------
Confidence 999999999999999999999999998876 7999999998643200
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
......
T Consensus 173 --------------------------------------------------------------------------~~~~~~ 178 (361)
T 2yab_A 173 --------------------------------------------------------------------------VEFKNI 178 (361)
T ss_dssp --------------------------------------------------------------------------CCCCCC
T ss_pred --------------------------------------------------------------------------CccccC
Confidence 001345
Q ss_pred cccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCC--CC-CCCCCCHHHHHHHHHccc
Q 002843 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRIL--PP-SFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 493 ~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~l--pp-~~~~~~p~l~dLi~~cL~ 567 (874)
+||+.|+|||++.+..|+.++|||||||++|+|++|..||.. ....+..+..... ++ .+...++.+.+||.+||.
T Consensus 179 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~ 258 (361)
T 2yab_A 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLV 258 (361)
T ss_dssp CSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSC
T ss_pred CCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCC
Confidence 789999999999998999999999999999999999999832 2233444443322 21 234556778999999999
Q ss_pred cCCCCCCChhHHhhhHHHHhhHh
Q 002843 568 PEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
+||.+|||+.|+|+||||+....
T Consensus 259 ~dP~~R~t~~e~l~hp~~~~~~~ 281 (361)
T 2yab_A 259 KETRKRLTIQEALRHPWITPVDT 281 (361)
T ss_dssp SSTTTSCCHHHHHTSTTTSCSSH
T ss_pred CChhHCcCHHHHhcCcCcCCCch
Confidence 99999999999999999986543
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=316.75 Aligned_cols=212 Identities=15% Similarity=0.142 Sum_probs=171.4
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.+.......... +++||||+||+|.+++.+.+ .+++.+++.++.|
T Consensus 51 ~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~----------------~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~q 113 (337)
T 1o6l_A 51 HTVTESRVLQNTRHPFLTALKYAFQTHDRL----------------CFVMEYANGGELFFHLSRER-VFTEERARFYGAE 113 (337)
T ss_dssp HHHHHHHHHHSCCCTTBCCEEEEEECSSEE----------------EEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcCcceEEEEEeCCEE----------------EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHH
Confidence 345566777888899999988776644332 56999999999999998765 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 114 i~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~----------------------------------- 158 (337)
T 1o6l_A 114 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD----------------------------------- 158 (337)
T ss_dssp HHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-----------------------------------
T ss_pred HHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC-----------------------------------
Confidence 999999999999999999999999999999999999998632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......+||+.
T Consensus 159 --------------------------------------------------------------------~~~~~~~~gt~~ 170 (337)
T 1o6l_A 159 --------------------------------------------------------------------GATMKTFCGTPE 170 (337)
T ss_dssp --------------------------------------------------------------------TCCBCCCEECGG
T ss_pred --------------------------------------------------------------------CCcccccccChh
Confidence 000135579999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCC-CCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~-lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||++.+..|+.++|||||||++|||++|..||.. .......+.... ..| ...++.+.+||.+||..||.+||
T Consensus 171 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~lL~~dP~~R~ 248 (337)
T 1o6l_A 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--RTLSPEAKSLLAGLLKKDPKQRL 248 (337)
T ss_dssp GCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSTTTST
T ss_pred hCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHhhcCHHHhc
Confidence 9999999998999999999999999999999999832 222333333222 111 23467899999999999999999
Q ss_pred -----ChhHHhhhHHHHhhHhh
Q 002843 575 -----TTREILQSEVTNEFQEV 591 (874)
Q Consensus 575 -----Ta~EiL~hp~~~~~~~~ 591 (874)
++.|+++||||..+.+.
T Consensus 249 g~~~~~~~ei~~h~~f~~~~~~ 270 (337)
T 1o6l_A 249 GGGPSDAKEVMEHRFFLSINWQ 270 (337)
T ss_dssp TCSTTTHHHHHTSGGGTTCCHH
T ss_pred CCCCCCHHHHHcCCCcCCCCHH
Confidence 89999999999987654
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=326.07 Aligned_cols=211 Identities=18% Similarity=0.174 Sum_probs=167.4
Q ss_pred HHhHH-hhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 262 GAMMV-ASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 262 ~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
+..++ ....||+++.+.......... +++||||+||+|..++.+.+ .+++.+++.|+.||+.
T Consensus 102 E~~il~~~~~hp~Iv~l~~~~~~~~~~----------------~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~ 164 (396)
T 4dc2_A 102 EKHVFEQASNHPFLVGLHSCFQTESRL----------------FFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISL 164 (396)
T ss_dssp HHHHHHHHTTCTTBCCEEEEEECSSEE----------------EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCcCeeEEEEEECCEE----------------EEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHH
Confidence 33334 344899999988876543332 56999999999999998765 7999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||+|||++|||||||||+||||+.++.+||+|||+++.....
T Consensus 165 aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~-------------------------------------- 206 (396)
T 4dc2_A 165 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-------------------------------------- 206 (396)
T ss_dssp HHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--------------------------------------
T ss_pred HHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccC--------------------------------------
Confidence 999999999999999999999999999999999998632200
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
.......+||+.|+|
T Consensus 207 -----------------------------------------------------------------~~~~~~~~gt~~Y~a 221 (396)
T 4dc2_A 207 -----------------------------------------------------------------GDTTSTFCGTPNYIA 221 (396)
T ss_dssp -----------------------------------------------------------------TCCBCCCCBCGGGCC
T ss_pred -----------------------------------------------------------------CCccccccCCcccCC
Confidence 000135689999999
Q ss_pred cccccCCCCCCccchhHHHHHHHHhcCCCCchHHH-----------HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccC
Q 002843 501 PEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL-----------AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 501 PEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~-----------~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~d 569 (874)
||++.+..|+.++|||||||+||||++|..||... ......+....+ ......++.+.+||.+||..|
T Consensus 222 PE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~lL~~d 300 (396)
T 4dc2_A 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKD 300 (396)
T ss_dssp HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHTCSC
T ss_pred chhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc-CCCCcCCHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999998421 112222322221 111234678999999999999
Q ss_pred CCCCCCh------hHHhhhHHHHhhHhhhh
Q 002843 570 PLSRPTT------REILQSEVTNEFQEVCA 593 (874)
Q Consensus 570 P~~RPTa------~EiL~hp~~~~~~~~~~ 593 (874)
|.+||++ .||++||||+.+.+...
T Consensus 301 P~~R~~~~~~~~~~ei~~Hpff~~i~w~~l 330 (396)
T 4dc2_A 301 PKERLGCHPQTGFADIQGHPFFRNVDWDMM 330 (396)
T ss_dssp TTTSTTCSTTTHHHHHHHSTTTTTCCHHHH
T ss_pred HhHcCCCCCCCCHHHHhcCccccCCCHHHH
Confidence 9999996 79999999998876554
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=323.21 Aligned_cols=245 Identities=14% Similarity=0.122 Sum_probs=184.6
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (874)
.|.||++.. .. .+...+.+.++.....+......+..++....||+++.++........
T Consensus 102 ~g~Vy~a~~----~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~---------------- 160 (373)
T 2x4f_A 102 FGQVHKCEE----TA-TGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKND---------------- 160 (373)
T ss_dssp --CEEEEEE----TT-TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE----------------
T ss_pred CEEEEEEEE----cC-CCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE----------------
Confidence 366777641 00 122233334444433444556667778888899999999887654332
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEe--cCCcEEEeccccchhcc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL--QSNQVKYIGPIIQKETL 380 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~--~~~~vKLiDFGlar~~~ 380 (874)
.+++||||+|++|.+++......+++.+++.|+.||+.||+|||++||+||||||+|||+. .++.+||+|||+++...
T Consensus 161 ~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 161 IVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp EEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence 2569999999999999977655799999999999999999999999999999999999994 56789999999986432
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
..
T Consensus 241 ~~------------------------------------------------------------------------------ 242 (373)
T 2x4f_A 241 PR------------------------------------------------------------------------------ 242 (373)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHH
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAA 538 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~ 538 (874)
......+||+.|+|||++.+..++.++|||||||+||||++|..||.. ....
T Consensus 243 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 296 (373)
T 2x4f_A 243 --------------------------EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET 296 (373)
T ss_dssp --------------------------CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred --------------------------cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 000234689999999999988899999999999999999999999842 2222
Q ss_pred HHHhhcCC---CCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 539 MSDLRDRI---LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 539 ~~~l~~~~---lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
+..+.... .++.+....+.+.+||.+||.+||.+|||+.|+|+||||...+...
T Consensus 297 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~~~~ 353 (373)
T 2x4f_A 297 LNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHS 353 (373)
T ss_dssp HHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHHHHH
T ss_pred HHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCchhh
Confidence 33333322 2223445678899999999999999999999999999999876543
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=317.50 Aligned_cols=211 Identities=18% Similarity=0.169 Sum_probs=167.2
Q ss_pred HHHHhHHhh-cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 260 AAGAMMVAS-NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 260 ~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
..+..++.. ..||+++.+......+... +++||||+||+|.+++.+.+ .+++.+++.++.||
T Consensus 57 ~~E~~~l~~~~~hp~iv~l~~~~~~~~~~----------------~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi 119 (345)
T 3a8x_A 57 QTEKHVFEQASNHPFLVGLHSCFQTESRL----------------FFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEI 119 (345)
T ss_dssp HHHHHHHHHTTTCTTBCCEEEEEECSSEE----------------EEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCccCeEEEEEEeCCEE----------------EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 344444444 4899999998876544332 56999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++++||+|||+++.....
T Consensus 120 ~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~------------------------------------ 163 (345)
T 3a8x_A 120 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP------------------------------------ 163 (345)
T ss_dssp HHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT------------------------------------
T ss_pred HHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCC------------------------------------
Confidence 99999999999999999999999999999999999998632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......+||+.|
T Consensus 164 -------------------------------------------------------------------~~~~~~~~gt~~y 176 (345)
T 3a8x_A 164 -------------------------------------------------------------------GDTTSTFCGTPNY 176 (345)
T ss_dssp -------------------------------------------------------------------TCCBCCCCSCGGG
T ss_pred -------------------------------------------------------------------CCcccccCCCccc
Confidence 0001355799999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH-----------HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccc
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA-----------LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~-----------~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~ 567 (874)
+|||++.+..|+.++|||||||++|||++|..||.. .......+....+. .....++.+.+||.+||.
T Consensus 177 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~li~~lL~ 255 (345)
T 3a8x_A 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-IPRSLSVKAASVLKSFLN 255 (345)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC-CCTTSCHHHHHHHHHHTC
T ss_pred cCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHHhc
Confidence 999999998999999999999999999999999842 11222333322211 112345789999999999
Q ss_pred cCCCCCCCh------hHHhhhHHHHhhHhh
Q 002843 568 PEPLSRPTT------REILQSEVTNEFQEV 591 (874)
Q Consensus 568 ~dP~~RPTa------~EiL~hp~~~~~~~~ 591 (874)
.||.+||++ .|+++||||+.+.+.
T Consensus 256 ~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~ 285 (345)
T 3a8x_A 256 KDPKERLGCHPQTGFADIQGHPFFRNVDWD 285 (345)
T ss_dssp SSTTTSTTCCTTTHHHHHHTSGGGTTCCHH
T ss_pred CCHhHCCCCCCcCCHHHHhcCCccCCCCHH
Confidence 999999996 799999999987654
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-34 Score=311.04 Aligned_cols=241 Identities=18% Similarity=0.196 Sum_probs=182.0
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
+.|.||++.. .. .+...+.+.+.............+...+....||+++.++........
T Consensus 57 ~~g~V~~a~~----~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--------------- 116 (321)
T 2c30_A 57 STGIVCLARE----KH-SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEE--------------- 116 (321)
T ss_dssp TTEEEEEEEE----TT-TCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE---------------
T ss_pred CCeEEEEEEE----CC-CCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCE---------------
Confidence 3466777641 00 112223333333333334456667778888899999988877654333
Q ss_pred CCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
.+++||||+|++|.+++... .+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 117 -~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 193 (321)
T 2c30_A 117 -LWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK 193 (321)
T ss_dssp -EEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred -EEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeeccc
Confidence 25699999999999999765 599999999999999999999999999999999999999999999999999864320
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
..
T Consensus 194 ~~------------------------------------------------------------------------------ 195 (321)
T 2c30_A 194 DV------------------------------------------------------------------------------ 195 (321)
T ss_dssp SS------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAM 539 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~ 539 (874)
.......||+.|+|||++.+..++.++|||||||++|||++|..||... ...+
T Consensus 196 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~ 250 (321)
T 2c30_A 196 -------------------------PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM 250 (321)
T ss_dssp -------------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred -------------------------cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0002457899999999999989999999999999999999999998432 2233
Q ss_pred HHhhcCCCCC--CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 540 SDLRDRILPP--SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 540 ~~l~~~~lpp--~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
..+.....+. ......+.+.+|+.+||+.||++|||+.|+|+||||...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 301 (321)
T 2c30_A 251 KRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT 301 (321)
T ss_dssp HHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred HHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence 3444333222 112345778999999999999999999999999999753
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=318.51 Aligned_cols=216 Identities=17% Similarity=0.140 Sum_probs=170.7
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC---CCCCCHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECL 332 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~---~~~lse~e~~ 332 (874)
......+..++....||+++.++.....++.. +++||||+|++|.+++... +..+++.+++
T Consensus 70 ~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~----------------~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~ 133 (351)
T 3c0i_A 70 TEDLKREASICHMLKHPHIVELLETYSSDGML----------------YMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 133 (351)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE----------------EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE----------------EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHH
Confidence 34455666777888999999998876644432 4699999999999988642 3369999999
Q ss_pred HHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCc---EEEeccccchhccccccCCCCcchhhhhhcccchhhhccccc
Q 002843 333 YIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ---VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGI 409 (874)
Q Consensus 333 ~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~---vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~ 409 (874)
.|+.||+.||+|||++||+||||||+|||++.++. +||+|||+++......
T Consensus 134 ~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~-------------------------- 187 (351)
T 3c0i_A 134 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG-------------------------- 187 (351)
T ss_dssp HHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTS--------------------------
T ss_pred HHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCC--------------------------
Confidence 99999999999999999999999999999987654 9999999986433000
Q ss_pred hhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccc
Q 002843 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSV 489 (874)
Q Consensus 410 ~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~ 489 (874)
...
T Consensus 188 -----------------------------------------------------------------------------~~~ 190 (351)
T 3c0i_A 188 -----------------------------------------------------------------------------LVA 190 (351)
T ss_dssp -----------------------------------------------------------------------------CBC
T ss_pred -----------------------------------------------------------------------------eee
Confidence 000
Q ss_pred ccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH-HHHHHhhcCCCC---CCCCCCCHHHHHHHHHc
Q 002843 490 SEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA-AAMSDLRDRILP---PSFLSENPKEAGFCLWQ 565 (874)
Q Consensus 490 t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~-~~~~~l~~~~lp---p~~~~~~p~l~dLi~~c 565 (874)
...+||++|+|||++.+..|+.++|||||||+||||++|..||.... ..+..+...... +.+...++.+.+||.+|
T Consensus 191 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~ 270 (351)
T 3c0i_A 191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRM 270 (351)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHH
T ss_pred cCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHH
Confidence 24578999999999999899999999999999999999999984322 223333332221 22345567899999999
Q ss_pred cccCCCCCCChhHHhhhHHHHhhHh
Q 002843 566 LHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 566 L~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
|++||++|||+.|+|+||||+....
T Consensus 271 L~~dP~~R~s~~e~l~hp~~~~~~~ 295 (351)
T 3c0i_A 271 LMLDPAERITVYEALNHPWLKERDR 295 (351)
T ss_dssp TCSSTTTSCCHHHHHTSHHHHTHHH
T ss_pred CCCChhHCcCHHHHhcChhhcCCcc
Confidence 9999999999999999999987543
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=310.88 Aligned_cols=212 Identities=15% Similarity=0.136 Sum_probs=165.0
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.+++....+.. .+++||||+| +|.+++......+++.+++.|+.|
T Consensus 65 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----------------~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~q 127 (311)
T 3niz_A 65 TAIREISLLKELHHPNIVSLIDVIHSERC----------------LTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQ 127 (311)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEECCSSC----------------EEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEeeeeeEEccCCE----------------EEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHH
Confidence 34566677888899999999887553322 2579999995 899999877667999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 128 i~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~----------------------------------- 172 (311)
T 3niz_A 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP----------------------------------- 172 (311)
T ss_dssp HHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC-----------------------------------
T ss_pred HHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCC-----------------------------------
Confidence 999999999999999999999999999999999999998643200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
........||++
T Consensus 173 --------------------------------------------------------------------~~~~~~~~~t~~ 184 (311)
T 3niz_A 173 --------------------------------------------------------------------VRSYTHEVVTLW 184 (311)
T ss_dssp --------------------------------------------------------------------CC---CCCCCCT
T ss_pred --------------------------------------------------------------------cccccCCcccCC
Confidence 000134578999
Q ss_pred ccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHH-----HHHHHHHhhcCCCCCC---------------------
Q 002843 498 YASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERA-----LAAAMSDLRDRILPPS--------------------- 550 (874)
Q Consensus 498 Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~-----~~~~~~~l~~~~lpp~--------------------- 550 (874)
|+|||++.+ ..++.++|||||||++|||++|..||.. ....+..+.....+..
T Consensus 185 y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (311)
T 3niz_A 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKK 264 (311)
T ss_dssp TCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCC
T ss_pred cCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCC
Confidence 999999987 4589999999999999999999988732 1111212111111111
Q ss_pred -----CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 551 -----FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 551 -----~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.....+.+.+||.+||++||++|||+.|+|+||||+++.
T Consensus 265 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 265 PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308 (311)
T ss_dssp CHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred cHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence 112346788999999999999999999999999999764
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=314.71 Aligned_cols=213 Identities=15% Similarity=0.162 Sum_probs=169.8
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
......+..++....||+++.+......... .+++||||+|++|.+++...+ .+++.+++.|+
T Consensus 58 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~ 120 (326)
T 2y0a_A 58 REDIEREVSILKEIQHPNVITLHEVYENKTD----------------VILILELVAGGELFDFLAEKE-SLTEEEATEFL 120 (326)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEEECSSE----------------EEEEEECCCSCBHHHHHTTSS-CCBHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE----------------EEEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHH
Confidence 3445566677888889999998877553332 256999999999999998765 79999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCC----cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSN----QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~----~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~ 411 (874)
.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.....
T Consensus 121 ~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~----------------------------- 171 (326)
T 2y0a_A 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----------------------------- 171 (326)
T ss_dssp HHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTT-----------------------------
T ss_pred HHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCC-----------------------------
Confidence 9999999999999999999999999999877 7999999998643200
Q ss_pred hhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccc
Q 002843 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (874)
Q Consensus 412 ~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~ 491 (874)
.....
T Consensus 172 ---------------------------------------------------------------------------~~~~~ 176 (326)
T 2y0a_A 172 ---------------------------------------------------------------------------NEFKN 176 (326)
T ss_dssp ---------------------------------------------------------------------------SCCCC
T ss_pred ---------------------------------------------------------------------------Ccccc
Confidence 00024
Q ss_pred ccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCC--C-CCCCCCCHHHHHHHHHcc
Q 002843 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRIL--P-PSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 492 ~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~l--p-p~~~~~~p~l~dLi~~cL 566 (874)
..||+.|+|||++.+..++.++|||||||++|+|++|..||.. ....+..+..... + +.+...++.+.+||.+||
T Consensus 177 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 256 (326)
T 2y0a_A 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256 (326)
T ss_dssp CCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHS
T ss_pred ccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHc
Confidence 5789999999999988999999999999999999999999832 2222333332211 1 112345677899999999
Q ss_pred ccCCCCCCChhHHhhhHHHHhhH
Q 002843 567 HPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.+||.+|||+.|+|+||||+...
T Consensus 257 ~~dP~~Rpt~~e~l~hp~~~~~~ 279 (326)
T 2y0a_A 257 VKDPKKRMTIQDSLQHPWIKPKD 279 (326)
T ss_dssp CSSGGGSCCHHHHHHSTTTSCCS
T ss_pred cCChhhCCCHHHHhcCCCccCCc
Confidence 99999999999999999998543
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=318.01 Aligned_cols=211 Identities=17% Similarity=0.150 Sum_probs=168.5
Q ss_pred HHHHhHHh-hcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 260 AAGAMMVA-SNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 260 ~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
..+..++. ...||+++.+.......... +++||||+||+|.++|.+.+ .+++.+++.|+.||
T Consensus 65 ~~E~~il~~~~~hp~iv~l~~~~~~~~~~----------------~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi 127 (345)
T 1xjd_A 65 MVEKRVLSLAWEHPFLTHMFCTFQTKENL----------------FFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEI 127 (345)
T ss_dssp HHHHHHHHHHTTCTTBCCEEEEEECSSEE----------------EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCCcEEEEEEeCCEE----------------EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 33444444 44899999988776543332 56999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 128 ~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~------------------------------------ 171 (345)
T 1xjd_A 128 ILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG------------------------------------ 171 (345)
T ss_dssp HHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT------------------------------------
T ss_pred HHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccC------------------------------------
Confidence 99999999999999999999999999999999999998632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......+||+.|
T Consensus 172 -------------------------------------------------------------------~~~~~~~~gt~~y 184 (345)
T 1xjd_A 172 -------------------------------------------------------------------DAKTNTFCGTPDY 184 (345)
T ss_dssp -------------------------------------------------------------------TCCBCCCCSCGGG
T ss_pred -------------------------------------------------------------------CCcccCCCCCccc
Confidence 0001356799999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCC-CCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~-lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
+|||++.+..|+.++|||||||++|||++|..||.. ....+..+.... ..+ ...++.+.+||.+||..||.+||+
T Consensus 185 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~lL~~dp~~R~~ 262 (345)
T 1xjd_A 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP--RWLEKEAKDLLVKLFVREPEKRLG 262 (345)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHSCSSGGGSBT
T ss_pred CChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCC--cccCHHHHHHHHHHhcCCHhHcCC
Confidence 999999998999999999999999999999999842 222333443322 111 224577899999999999999999
Q ss_pred hh-HHhhhHHHHhhHhhh
Q 002843 576 TR-EILQSEVTNEFQEVC 592 (874)
Q Consensus 576 a~-EiL~hp~~~~~~~~~ 592 (874)
+. +|++||||+.+.+..
T Consensus 263 ~~~~i~~hp~f~~~~w~~ 280 (345)
T 1xjd_A 263 VRGDIRQHPLFREINWEE 280 (345)
T ss_dssp TBSCGGGSGGGTTCCHHH
T ss_pred ChHHHHcCccccCCCHHH
Confidence 98 999999999877554
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=312.42 Aligned_cols=201 Identities=22% Similarity=0.249 Sum_probs=161.5
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
.+.....||+++.+......++. .+++|||| +++|.+++...+..+++.+++.|+.||+.||+
T Consensus 109 ~~~~~~~h~~iv~l~~~~~~~~~----------------~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~ 171 (311)
T 3p1a_A 109 SHEKVGQHPCCVRLEQAWEEGGI----------------LYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALA 171 (311)
T ss_dssp HHHHHCCCTTBCCEEEEEEETTE----------------EEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCcEEEEEEEEEeCCE----------------EEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 44455589999988877653333 25699999 67999999876667999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 172 ~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~----------------------------------------- 210 (311)
T 3p1a_A 172 HLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA----------------------------------------- 210 (311)
T ss_dssp HHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-------------------------------------------
T ss_pred HHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC-----------------------------------------
Confidence 999999999999999999999999999999997643200
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
.......||+.|+|||+
T Consensus 211 ---------------------------------------------------------------~~~~~~~gt~~y~aPE~ 227 (311)
T 3p1a_A 211 ---------------------------------------------------------------GAGEVQEGDPRYMAPEL 227 (311)
T ss_dssp -------------------------------------------------------------------CCCCCGGGCCGGG
T ss_pred ---------------------------------------------------------------CCCcccCCCccccCHhH
Confidence 00023468999999999
Q ss_pred ccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCCC-CCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 504 LSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 504 l~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~~-~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+.+ .++.++|||||||++|||++|..++..... ...+.....++.+. ...+.+.+||.+||++||++|||+.|+|+|
T Consensus 228 ~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 228 LQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-WQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp GGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-HHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-HHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 886 799999999999999999999665533322 44455555554433 345779999999999999999999999999
Q ss_pred HHHHh
Q 002843 583 EVTNE 587 (874)
Q Consensus 583 p~~~~ 587 (874)
|||++
T Consensus 306 p~~~~ 310 (311)
T 3p1a_A 306 PVLRQ 310 (311)
T ss_dssp GGGSC
T ss_pred ccccC
Confidence 99974
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=303.22 Aligned_cols=213 Identities=15% Similarity=0.161 Sum_probs=162.9
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+......+... +++||||+| +|.+++......+++.+++.|+.
T Consensus 46 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ 108 (292)
T 3o0g_A 46 SSALREICLLKELKHKNIVRLHDVLHSDKKL----------------TLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLF 108 (292)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEEEEEETTEE----------------EEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCCCCEeeEEeEEEeCCEE----------------EEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHH
Confidence 3455667788888999999998876544332 569999985 67777766555899999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 109 ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------- 154 (292)
T 3o0g_A 109 QLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP---------------------------------- 154 (292)
T ss_dssp HHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC----------------------------------
T ss_pred HHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc----------------------------------
Confidence 9999999999999999999999999999999999999998633200
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
........||+
T Consensus 155 ---------------------------------------------------------------------~~~~~~~~~t~ 165 (292)
T 3o0g_A 155 ---------------------------------------------------------------------VRCYSAEVVTL 165 (292)
T ss_dssp ---------------------------------------------------------------------CSCCCSCCSCG
T ss_pred ---------------------------------------------------------------------cccccCCcccc
Confidence 00013457899
Q ss_pred cccCcccccCCC-CCCccchhHHHHHHHHhcCCCCch-H--HHHHHHHHhhc---CCCC---------------------
Q 002843 497 WYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSE-R--ALAAAMSDLRD---RILP--------------------- 548 (874)
Q Consensus 497 ~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~-~--~~~~~~~~l~~---~~lp--------------------- 548 (874)
+|+|||++.+.. ++.++|||||||++|||++|..|+ . .....+..+.. ...+
T Consensus 166 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (292)
T 3o0g_A 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT 245 (292)
T ss_dssp GGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTT
T ss_pred CCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCC
Confidence 999999998866 899999999999999999886664 1 11111222111 1100
Q ss_pred ----CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 549 ----PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 549 ----p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
......++.+.+||.+||+.||++|||+.|+|+||||++..
T Consensus 246 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 290 (292)
T 3o0g_A 246 TSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred cchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence 01123456788999999999999999999999999998643
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=321.42 Aligned_cols=240 Identities=16% Similarity=0.196 Sum_probs=168.0
Q ss_pred hhHHHHHHHHhHHhhcC-CCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHH
Q 002843 254 SDAALKAAGAMMVASNA-SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECL 332 (874)
Q Consensus 254 ~d~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~ 332 (874)
.+..+...+..++.... ||+++.++.....+.... .+++||||+ ++|.+++... .+++..+.
T Consensus 50 ~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~--------------~~lv~e~~~-~~L~~~~~~~--~~~~~~~~ 112 (388)
T 3oz6_A 50 TDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD--------------VYLVFDYME-TDLHAVIRAN--ILEPVHKQ 112 (388)
T ss_dssp HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC--------------EEEEEECCS-EEHHHHHHHT--CCCHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE--------------EEEEecccC-cCHHHHHHcC--CCCHHHHH
Confidence 34445556666666665 999999988765433222 267999998 5999999875 69999999
Q ss_pred HHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 333 YIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 333 ~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........ .+. .+.
T Consensus 113 ~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-----~~~----~~~------------ 171 (388)
T 3oz6_A 113 YVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRV-----TNN----IPL------------ 171 (388)
T ss_dssp HHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCC-----CCC----GGG------------
T ss_pred HHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccc-----ccc----ccc------------
Confidence 99999999999999999999999999999999999999999999854311000 000 000
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
..+. ............+..
T Consensus 172 ---------------------------~~~~----------------------------------~~~~~~~~~~~~~~~ 190 (388)
T 3oz6_A 172 ---------------------------SINE----------------------------------NTENFDDDQPILTDY 190 (388)
T ss_dssp ---------------------------CCC-------------------------------------------------C
T ss_pred ---------------------------cccc----------------------------------cccccccccccccCC
Confidence 0000 000000001122567
Q ss_pred cccccccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc-CCC---------------------
Q 002843 493 LEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD-RIL--------------------- 547 (874)
Q Consensus 493 ~GT~~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~-~~l--------------------- 547 (874)
+||++|+|||++.+ ..|+.++||||||||||||++|.+||.... ..+..+.. ...
T Consensus 191 ~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~ 270 (388)
T 3oz6_A 191 VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESL 270 (388)
T ss_dssp CCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHH
T ss_pred cccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhC
Confidence 89999999999987 569999999999999999999998873211 11111111 000
Q ss_pred -----------CC-------------CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 548 -----------PP-------------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 548 -----------pp-------------~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
.. .....++.+.+||.+||..||.+|||+.|+|+||||+.+....
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~~ 339 (388)
T 3oz6_A 271 KEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPN 339 (388)
T ss_dssp HHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCGG
T ss_pred cccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCCc
Confidence 00 0114457789999999999999999999999999998765443
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=322.85 Aligned_cols=241 Identities=19% Similarity=0.184 Sum_probs=184.4
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (874)
.|.||++.. .. .+...+++.+....+.+......+..++....||+++.++........
T Consensus 64 ~g~Vy~~~~----~~-~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~---------------- 122 (387)
T 1kob_A 64 FGVVHRCVE----KA-TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE---------------- 122 (387)
T ss_dssp TEEEEEEEE----TT-TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSE----------------
T ss_pred CEEEEEEEE----CC-CCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCE----------------
Confidence 367888752 11 112233334444444455556667788888999999999887653332
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEec--CCcEEEeccccchhcc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ--SNQVKYIGPIIQKETL 380 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~--~~~vKLiDFGlar~~~ 380 (874)
.+++||||+|++|.+++...+..+++.+++.|+.||+.||+|||++||+||||||+|||++. .+.+||+|||+++...
T Consensus 123 ~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 123 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 25699999999999999876557999999999999999999999999999999999999974 4679999999986432
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
..
T Consensus 203 ~~------------------------------------------------------------------------------ 204 (387)
T 1kob_A 203 PD------------------------------------------------------------------------------ 204 (387)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 00
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHH
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAA 538 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~ 538 (874)
.......||+.|+|||++.+..++.++|||||||++|||++|..||... ...
T Consensus 205 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~ 258 (387)
T 1kob_A 205 --------------------------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET 258 (387)
T ss_dssp --------------------------SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH
T ss_pred --------------------------cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH
Confidence 0002346899999999999989999999999999999999999998432 222
Q ss_pred HHHhhcCC---CCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 539 MSDLRDRI---LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 539 ~~~l~~~~---lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
+..+.... .++.+...++.+.+||.+||..||.+|||+.|+|+||||+..
T Consensus 259 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 311 (387)
T 1kob_A 259 LQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311 (387)
T ss_dssp HHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred HHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCC
Confidence 33333322 223344567889999999999999999999999999999864
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=313.85 Aligned_cols=206 Identities=17% Similarity=0.195 Sum_probs=147.7
Q ss_pred hHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Q 002843 264 MMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 264 ~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL 342 (874)
..+... .||+++.++.....+... +++||||+|++|.+++...+ .+++.+++.|+.||+.||
T Consensus 57 ~~l~~l~~h~niv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l 119 (325)
T 3kn6_A 57 TALKLCEGHPNIVKLHEVFHDQLHT----------------FLVMELLNGGELFERIKKKK-HFSETEASYIMRKLVSAV 119 (325)
T ss_dssp HHHHHTTTCTTBCCEEEEEECSSEE----------------EEEECCCCSCBHHHHHHHCS-CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCeeEEEEEEEcCCEE----------------EEEEEccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 334444 499999998876533322 56999999999999998875 799999999999999999
Q ss_pred HHHHHCCCcccCCCCCceEEecCC---cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 343 DYHHTQGVTFLDLKPSSFKLLQSN---QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 343 ~yLHs~gIIHRDLKPsNILL~~~~---~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
+|||++||+||||||+|||++.++ .+||+|||+++.....
T Consensus 120 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~------------------------------------- 162 (325)
T 3kn6_A 120 SHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD------------------------------------- 162 (325)
T ss_dssp HHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------------------------------------
T ss_pred HHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC-------------------------------------
Confidence 999999999999999999998765 7999999998632200
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.......+||+.|+
T Consensus 163 ------------------------------------------------------------------~~~~~~~~~t~~y~ 176 (325)
T 3kn6_A 163 ------------------------------------------------------------------NQPLKTPCFTLHYA 176 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------------CCcccccCCCcCcc
Confidence 00013456899999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH---------HHHHHhhcCCCCCC---CCCCCHHHHHHHHHccc
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA---------AAMSDLRDRILPPS---FLSENPKEAGFCLWQLH 567 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---------~~~~~l~~~~lpp~---~~~~~p~l~dLi~~cL~ 567 (874)
|||++.+..|+.++|||||||++|||++|..||.... ..+..+.....+.. +...++.+.+||.+||+
T Consensus 177 aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~ 256 (325)
T 3kn6_A 177 APELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLT 256 (325)
T ss_dssp -------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHC
T ss_pred CHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCC
Confidence 9999999899999999999999999999999985432 23344444333221 23456789999999999
Q ss_pred cCCCCCCChhHHhhhHHHHhhH
Q 002843 568 PEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+||.+|||+.|+|+||||+...
T Consensus 257 ~dP~~Rpt~~ell~h~w~~~~~ 278 (325)
T 3kn6_A 257 VDPNKRLKMSGLRYNEWLQDGS 278 (325)
T ss_dssp CCTTTCCCTTTSTTCGGGCTTC
T ss_pred CChhHCCCHHHHhcChhhccCc
Confidence 9999999999999999998643
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-34 Score=327.51 Aligned_cols=216 Identities=13% Similarity=0.087 Sum_probs=173.4
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......+... +++||||+||+|.++|.+....+++..++.|+.||
T Consensus 121 ~~~E~~il~~~~hp~Iv~l~~~~~~~~~~----------------~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi 184 (437)
T 4aw2_A 121 FREERDVLVNGDSKWITTLHYAFQDDNNL----------------YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEM 184 (437)
T ss_dssp HHHHHHHHHHSCTTTBCCEEEEEECSSEE----------------EEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEEEEEeeCCEE----------------EEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHH
Confidence 34455667778899999888776544332 56999999999999998854579999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++|||||||||+||||+.++.+||+|||+++.......
T Consensus 185 ~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~---------------------------------- 230 (437)
T 4aw2_A 185 VIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT---------------------------------- 230 (437)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC----------------------------------
T ss_pred HHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC----------------------------------
Confidence 9999999999999999999999999999999999999874330000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
...+..+||++|
T Consensus 231 --------------------------------------------------------------------~~~~~~~GT~~Y 242 (437)
T 4aw2_A 231 --------------------------------------------------------------------VQSSVAVGTPDY 242 (437)
T ss_dssp --------------------------------------------------------------------EECCSCCSCGGG
T ss_pred --------------------------------------------------------------------cccccccCCcCe
Confidence 001345899999
Q ss_pred cCccccc-----CCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhh----cCCCCCCCCCCCHHHHHHHHHccc
Q 002843 499 ASPEELS-----GGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLR----DRILPPSFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 499 ~APEvl~-----g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~----~~~lpp~~~~~~p~l~dLi~~cL~ 567 (874)
+|||++. ...|+.++|||||||+||||++|..||.. .......+. ...+|......++.+.+||.+||.
T Consensus 243 ~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~ 322 (437)
T 4aw2_A 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLIC 322 (437)
T ss_dssp CCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSS
T ss_pred eChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhc
Confidence 9999997 45699999999999999999999999832 222233332 234455555677889999999999
Q ss_pred cCCCC--CCChhHHhhhHHHHhhHhhh
Q 002843 568 PEPLS--RPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 568 ~dP~~--RPTa~EiL~hp~~~~~~~~~ 592 (874)
.+|++ ||++.|+++||||+++.+..
T Consensus 323 ~~~~r~~r~~~~eil~Hpff~~i~w~~ 349 (437)
T 4aw2_A 323 SREHRLGQNGIEDFKKHPFFSGIDWDN 349 (437)
T ss_dssp CGGGCTTTTTTHHHHTSGGGTTCCTTT
T ss_pred ccccccCCCCHHHHhCCCccCCCCHHH
Confidence 88888 99999999999999877654
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-34 Score=311.47 Aligned_cols=210 Identities=13% Similarity=0.107 Sum_probs=170.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+.......... +++||||+||+|.++|...+ .+++..++.++.||
T Consensus 53 ~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~----------------~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi 115 (318)
T 1fot_A 53 TNDERLMLSIVTHPFIIRMWGTFQDAQQI----------------FMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEV 115 (318)
T ss_dssp HHHHHHHHHSCCBTTBCCEEEEEECSSEE----------------EEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCCceEeEEEEeCCEE----------------EEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 44566677788999999998876533332 56999999999999998866 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 116 ~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~------------------------------------- 158 (318)
T 1fot_A 116 CLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD------------------------------------- 158 (318)
T ss_dssp HHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS-------------------------------------
T ss_pred HHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC-------------------------------------
Confidence 9999999999999999999999999999999999999863220
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.....+||+.|
T Consensus 159 ---------------------------------------------------------------------~~~~~~gt~~y 169 (318)
T 1fot_A 159 ---------------------------------------------------------------------VTYTLCGTPDY 169 (318)
T ss_dssp ---------------------------------------------------------------------CBCCCCSCTTT
T ss_pred ---------------------------------------------------------------------ccccccCCccc
Confidence 00245789999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC--
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-- 574 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP-- 574 (874)
+|||++.+..|+.++|||||||++|||++|..||.. .......+....+. .....++.+.+||.+||..||++||
T Consensus 170 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~p~~~~~~~~~li~~lL~~dp~~R~~~ 248 (318)
T 1fot_A 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELR-FPPFFNEDVKDLLSRLITRDLSQRLGN 248 (318)
T ss_dssp CCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSCTTTCTTS
T ss_pred cCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-CCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 999999999999999999999999999999999832 22223333332211 1123457799999999999999999
Q ss_pred ---ChhHHhhhHHHHhhHhhh
Q 002843 575 ---TTREILQSEVTNEFQEVC 592 (874)
Q Consensus 575 ---Ta~EiL~hp~~~~~~~~~ 592 (874)
++.|+++||||+.+.+..
T Consensus 249 ~~~~~~~i~~hp~f~~~~~~~ 269 (318)
T 1fot_A 249 LQNGTEDVKNHPWFKEVVWEK 269 (318)
T ss_dssp STTTTHHHHTSGGGSSCCHHH
T ss_pred cCCCHHHHhcCccccCCCHHH
Confidence 899999999999876544
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-34 Score=306.93 Aligned_cols=209 Identities=14% Similarity=0.106 Sum_probs=164.7
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+........... .+++||||+|++|.+++... .+++.+++.++.||
T Consensus 83 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--------------~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi 146 (298)
T 2zv2_A 83 VYQEIAILKKLDHPNVVKLVEVLDDPNEDH--------------LYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDL 146 (298)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEECSSSSE--------------EEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCeEEEEEEcCCCCE--------------EEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHH
Confidence 455667788889999999887755321111 26799999999999876543 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 147 ~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------------------- 191 (298)
T 2zv2_A 147 IKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD----------------------------------- 191 (298)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSS-----------------------------------
T ss_pred HHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCcccccccc-----------------------------------
Confidence 999999999999999999999999999999999999986432000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......||+.|
T Consensus 192 --------------------------------------------------------------------~~~~~~~gt~~y 203 (298)
T 2zv2_A 192 --------------------------------------------------------------------ALLSNTVGTPAF 203 (298)
T ss_dssp --------------------------------------------------------------------CEECCCCSCGGG
T ss_pred --------------------------------------------------------------------ccccCCcCCccc
Confidence 001244789999
Q ss_pred cCcccccCCC---CCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCC-CCCCCCCCHHHHHHHHHccccCCCC
Q 002843 499 ASPEELSGGV---CTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRIL-PPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 499 ~APEvl~g~~---ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~l-pp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
+|||++.+.. ++.++|||||||++|||++|..||... ......+....+ .+......+.+.+||.+||++||++
T Consensus 204 ~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 283 (298)
T 2zv2_A 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPES 283 (298)
T ss_dssp CCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTT
T ss_pred cChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhh
Confidence 9999998755 478899999999999999999998432 222333333322 2333455678999999999999999
Q ss_pred CCChhHHhhhHHHH
Q 002843 573 RPTTREILQSEVTN 586 (874)
Q Consensus 573 RPTa~EiL~hp~~~ 586 (874)
|||+.|+|+||||+
T Consensus 284 R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 284 RIVVPEIKLHPWVT 297 (298)
T ss_dssp SCCHHHHTTCHHHH
T ss_pred CCCHHHHhcCcccc
Confidence 99999999999996
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=325.95 Aligned_cols=214 Identities=16% Similarity=0.255 Sum_probs=173.5
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYI 334 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I 334 (874)
+......+...+....||+++.++......+.. +++||||.|++|.+++...+ .+++.+++.|
T Consensus 69 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i 131 (484)
T 3nyv_A 69 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF----------------YLVGEVYTGGELFDEIISRK-RFSEVDAARI 131 (484)
T ss_dssp CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE----------------EEEECCCCSCBHHHHHHTCS-CCBHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE----------------EEEEecCCCCCHHHHHHhcC-CCCHHHHHHH
Confidence 344556677788888999999998876543332 46999999999999998776 7999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEE---ecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKL---LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL---~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~ 411 (874)
++||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 132 ~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~----------------------------- 182 (484)
T 3nyv_A 132 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS----------------------------- 182 (484)
T ss_dssp HHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC-----------------------------
T ss_pred HHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc-----------------------------
Confidence 9999999999999999999999999999 45688999999998743300
Q ss_pred hhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccc
Q 002843 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (874)
Q Consensus 412 ~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~ 491 (874)
.....
T Consensus 183 ---------------------------------------------------------------------------~~~~~ 187 (484)
T 3nyv_A 183 ---------------------------------------------------------------------------KKMKD 187 (484)
T ss_dssp ---------------------------------------------------------------------------CSHHH
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 00134
Q ss_pred ccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCC---CCCCCCCHHHHHHHHHcc
Q 002843 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILP---PSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 492 ~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lp---p~~~~~~p~l~dLi~~cL 566 (874)
.+||++|+|||++.+ .|+.++|||||||++|+|++|.+||.. ....+..+...... +.+...++.+.+||.+||
T Consensus 188 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L 266 (484)
T 3nyv_A 188 KIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 266 (484)
T ss_dssp HTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHT
T ss_pred CCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHC
Confidence 578999999999986 699999999999999999999999843 22234444443332 334456688999999999
Q ss_pred ccCCCCCCChhHHhhhHHHHhhHh
Q 002843 567 HPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
++||.+|||+.|+|+||||+....
T Consensus 267 ~~dp~~R~s~~e~l~h~~~~~~~~ 290 (484)
T 3nyv_A 267 TYVPSMRISARDALDHEWIQTYTK 290 (484)
T ss_dssp CSSGGGSCCHHHHHTSHHHHHHTC
T ss_pred CCChhHCcCHHHHhhChhhccccc
Confidence 999999999999999999987653
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-34 Score=318.83 Aligned_cols=221 Identities=15% Similarity=0.163 Sum_probs=165.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~Q 337 (874)
...+..++....||+++.++.....++.. +++||||+|++|.+++... ...+++.+++.|+.|
T Consensus 73 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~q 136 (389)
T 3gni_B 73 LQGELHVSKLFNHPNIVPYRATFIADNEL----------------WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG 136 (389)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEEETTEE----------------EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcEeEEEEECCEE----------------EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHH
Confidence 44466788888999999998876644432 5699999999999999774 237999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus 137 i~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~-----------------------~~-------- 185 (389)
T 3gni_B 137 VLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ-----------------------RQ-------- 185 (389)
T ss_dssp HHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTE-----------------------EC--------
T ss_pred HHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccc-----------------------cc--------
Confidence 99999999999999999999999999999999999998764331000 00
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
... . ......+||+.
T Consensus 186 ---------------------~~~-------------------------------~-------------~~~~~~~gt~~ 200 (389)
T 3gni_B 186 ---------------------RVV-------------------------------H-------------DFPKYSVKVLP 200 (389)
T ss_dssp ---------------------SCB-------------------------------C-------------CCCTTCTTTGG
T ss_pred ---------------------ccc-------------------------------c-------------ccccccccccc
Confidence 000 0 00024578999
Q ss_pred ccCcccccC--CCCCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhcCC--------------------------
Q 002843 498 YASPEELSG--GVCTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRDRI-------------------------- 546 (874)
Q Consensus 498 Y~APEvl~g--~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~~~-------------------------- 546 (874)
|+|||++.+ ..|+.++|||||||++|||++|..||.... .....+....
T Consensus 201 y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (389)
T 3gni_B 201 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSG 280 (389)
T ss_dssp GSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------------------------
T ss_pred ccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccc
Confidence 999999988 579999999999999999999999984311 0111100000
Q ss_pred ------------------CCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 547 ------------------LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 547 ------------------lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
..+......+.+.+||.+||++||++|||+.|+|+||||+.+...
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~~ 343 (389)
T 3gni_B 281 LSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRR 343 (389)
T ss_dssp -------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC---
T ss_pred cccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhhc
Confidence 001112335678999999999999999999999999999987643
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=315.00 Aligned_cols=210 Identities=14% Similarity=0.072 Sum_probs=171.9
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.+......+... +++||||+||+|.++|.+.+ .+++.+++.|+.|
T Consensus 87 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~----------------~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~q 149 (350)
T 1rdq_E 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNL----------------YMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQ 149 (350)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEECSSEE----------------EEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEEcCCEE----------------EEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHH
Confidence 345566778888999999987776543332 56999999999999998866 6999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 150 i~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~------------------------------------ 193 (350)
T 1rdq_E 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------------------------------------ 193 (350)
T ss_dssp HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS------------------------------------
T ss_pred HHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccC------------------------------------
Confidence 99999999999999999999999999999999999999863220
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.....+||+.
T Consensus 194 ----------------------------------------------------------------------~~~~~~gt~~ 203 (350)
T 1rdq_E 194 ----------------------------------------------------------------------RTWTLCGTPE 203 (350)
T ss_dssp ----------------------------------------------------------------------CBCCCEECGG
T ss_pred ----------------------------------------------------------------------CcccccCCcc
Confidence 0024578999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
|+|||++.+..|+.++|||||||++|||++|..||.. .......+....++ .....++.+.+||.+||+.||.+||+
T Consensus 204 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~p~~~~~~~~~li~~lL~~dp~~R~~ 282 (350)
T 1rdq_E 204 ALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKDLLRNLLQVDLTKRFG 282 (350)
T ss_dssp GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCTTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred ccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHHhccC
Confidence 9999999998999999999999999999999999842 22233444433221 11234678999999999999999998
Q ss_pred -----hhHHhhhHHHHhhHhh
Q 002843 576 -----TREILQSEVTNEFQEV 591 (874)
Q Consensus 576 -----a~EiL~hp~~~~~~~~ 591 (874)
+.||++||||+.+.+.
T Consensus 283 ~~~~~~~ei~~h~~f~~~~w~ 303 (350)
T 1rdq_E 283 NLKNGVNDIKNHKWFATTDWI 303 (350)
T ss_dssp SSTTTTHHHHTSGGGTTCCHH
T ss_pred CccCCHHHHHhCcCcCCCCHH
Confidence 9999999999987654
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=315.60 Aligned_cols=214 Identities=14% Similarity=0.131 Sum_probs=168.7
Q ss_pred HHHHHhHHhh-cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVAS-NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
...+...+.. ..||+++.+.......... +++||||+||+|.++|.+.+ .+++.+++.|+.|
T Consensus 67 ~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~----------------~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~q 129 (353)
T 2i0e_A 67 TMVEKRVLALPGKPPFLTQLHSCFQTMDRL----------------YFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAE 129 (353)
T ss_dssp HHHHHHHHTCTTCCTTBCCEEEEEECSSEE----------------EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEeeEEEEEEcCCEE----------------EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHH
Confidence 3444445544 3788888887776543332 56999999999999998765 6999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 130 i~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~----------------------------------- 174 (353)
T 2i0e_A 130 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD----------------------------------- 174 (353)
T ss_dssp HHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-----------------------------------
T ss_pred HHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccC-----------------------------------
Confidence 999999999999999999999999999999999999998632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......+||+.
T Consensus 175 --------------------------------------------------------------------~~~~~~~~gt~~ 186 (353)
T 2i0e_A 175 --------------------------------------------------------------------GVTTKTFCGTPD 186 (353)
T ss_dssp --------------------------------------------------------------------TCCBCCCCSCGG
T ss_pred --------------------------------------------------------------------CcccccccCCcc
Confidence 000134579999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
|+|||++.+..|+.++|||||||++|||++|..||.. .......+....+. .....++.+.+||.+||..||.+||+
T Consensus 187 y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~li~~lL~~dP~~R~~ 265 (353)
T 2i0e_A 187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKRLG 265 (353)
T ss_dssp GCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSCTTSCTT
T ss_pred ccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC-CCCCCCHHHHHHHHHHhhcCHHHcCC
Confidence 9999999999999999999999999999999999842 22233344332221 11234678999999999999999995
Q ss_pred -----hhHHhhhHHHHhhHhhhh
Q 002843 576 -----TREILQSEVTNEFQEVCA 593 (874)
Q Consensus 576 -----a~EiL~hp~~~~~~~~~~ 593 (874)
+.+|++||||+.+.+...
T Consensus 266 ~~~~~~~~i~~h~~f~~~~w~~l 288 (353)
T 2i0e_A 266 CGPEGERDIKEHAFFRYIDWEKL 288 (353)
T ss_dssp CSTTHHHHHHTSGGGTTCCHHHH
T ss_pred CCCCCHHHHhcCccccCCCHHHH
Confidence 599999999998766543
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=308.03 Aligned_cols=215 Identities=14% Similarity=0.134 Sum_probs=164.9
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-----CCCCHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-----HKGKRIEC 331 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-----~~lse~e~ 331 (874)
.....+..++....||+++.++.....++. .+++||||+ ++|.+++.... ..+++..+
T Consensus 48 ~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----------------~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~ 110 (317)
T 2pmi_A 48 STAIREISLMKELKHENIVRLYDVIHTENK----------------LTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLV 110 (317)
T ss_dssp HHHHHHHHHHTTCCBTTBCCEEEEECCTTE----------------EEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHH
T ss_pred HHHHHHHHHHHhcCCCCcceEEEEEEECCe----------------EEEEEEecC-CCHHHHHHhccccccccCCCHHHH
Confidence 345566778888899999999887553332 256999999 59999997532 25999999
Q ss_pred HHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchh
Q 002843 332 LYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (874)
Q Consensus 332 ~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~ 411 (874)
+.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 111 ~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~----------------------------- 161 (317)
T 2pmi_A 111 KYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP----------------------------- 161 (317)
T ss_dssp HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSC-----------------------------
T ss_pred HHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCC-----------------------------
Confidence 999999999999999999999999999999999999999999998643200
Q ss_pred hhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccc
Q 002843 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (874)
Q Consensus 412 ~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~ 491 (874)
......
T Consensus 162 --------------------------------------------------------------------------~~~~~~ 167 (317)
T 2pmi_A 162 --------------------------------------------------------------------------VNTFSS 167 (317)
T ss_dssp --------------------------------------------------------------------------CCCCCC
T ss_pred --------------------------------------------------------------------------cccCCC
Confidence 000124
Q ss_pred ccccccccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhh---cCCC-------------CC---
Q 002843 492 QLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLR---DRIL-------------PP--- 549 (874)
Q Consensus 492 ~~GT~~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~---~~~l-------------pp--- 549 (874)
.+||+.|+|||++.+. .++.++|||||||++|||++|..||... ...+..+. .... .+
T Consensus 168 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (317)
T 2pmi_A 168 EVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQ 247 (317)
T ss_dssp CCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCC
T ss_pred CcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccc
Confidence 5789999999999874 5899999999999999999999888321 11111111 1000 00
Q ss_pred --------------CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 550 --------------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 550 --------------~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
......+.+.+||.+||.+||++|||+.|+|+||||++....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 303 (317)
T 2pmi_A 248 QRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHH 303 (317)
T ss_dssp CCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred cccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccch
Confidence 001234678999999999999999999999999999986543
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=313.87 Aligned_cols=210 Identities=15% Similarity=0.136 Sum_probs=160.3
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...+....||+++.+......... .+++||||+|++|.+++...+ .+++.+++.++.||
T Consensus 95 ~~~E~~~l~~l~h~niv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi 157 (349)
T 2w4o_A 95 VRTEIGVLLRLSHPNIIKLKEIFETPTE----------------ISLVLELVTGGELFDRIVEKG-YYSERDAADAVKQI 157 (349)
T ss_dssp ----CHHHHHCCCTTBCCEEEEEECSSE----------------EEEEECCCCSCBHHHHHTTCS-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcceeeeEecCCe----------------EEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 3345567777889999988877553322 257999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEec---CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQ---SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~---~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
+.||.|||++||+||||||+|||++. ++.+||+|||+++.....
T Consensus 158 ~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--------------------------------- 204 (349)
T 2w4o_A 158 LEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ--------------------------------- 204 (349)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----------------------------------------
T ss_pred HHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc---------------------------------
Confidence 99999999999999999999999975 789999999998633200
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
.......||
T Consensus 205 -----------------------------------------------------------------------~~~~~~~gt 213 (349)
T 2w4o_A 205 -----------------------------------------------------------------------VLMKTVCGT 213 (349)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -----------------------------------------------------------------------cccccccCC
Confidence 000245789
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH---HHHHHHHhhcCC---CCCCCCCCCHHHHHHHHHccccC
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA---LAAAMSDLRDRI---LPPSFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~---~~~~~~~l~~~~---lpp~~~~~~p~l~dLi~~cL~~d 569 (874)
+.|+|||++.+..++.++|||||||++|||++|..||.. ....+..+.... .++.+....+.+.+||.+||..|
T Consensus 214 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 293 (349)
T 2w4o_A 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLD 293 (349)
T ss_dssp GGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSS
T ss_pred CCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCC
Confidence 999999999998999999999999999999999988732 222233333322 22334456678999999999999
Q ss_pred CCCCCChhHHhhhHHHHhhH
Q 002843 570 PLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 570 P~~RPTa~EiL~hp~~~~~~ 589 (874)
|++|||+.|+|+||||....
T Consensus 294 P~~Rpt~~e~l~hp~~~~~~ 313 (349)
T 2w4o_A 294 PKKRLTTFQALQHPWVTGKA 313 (349)
T ss_dssp GGGSCCHHHHHHSTTTTSTT
T ss_pred hhhCcCHHHHhcCcccCCCc
Confidence 99999999999999998644
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=298.83 Aligned_cols=215 Identities=18% Similarity=0.172 Sum_probs=171.7
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+......++. .+++||||+|++|.+++.... .+++.+++.++.
T Consensus 50 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~ 112 (284)
T 3kk8_A 50 QKLEREARICRKLQHPNIVRLHDSIQEESF----------------HYLVFDLVTGGELFEDIVARE-FYSEADASHCIQ 112 (284)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEEECSSE----------------EEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCcCeEEEEEEcCCE----------------EEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHH
Confidence 334456677788889999998877553332 256999999999999998765 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCc---EEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ---VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~---vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
||+.||.|||++||+||||||+|||++.++. +||+|||++......
T Consensus 113 ~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~------------------------------- 161 (284)
T 3kk8_A 113 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS------------------------------- 161 (284)
T ss_dssp HHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS-------------------------------
T ss_pred HHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC-------------------------------
Confidence 9999999999999999999999999987655 999999988632200
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
.......
T Consensus 162 -------------------------------------------------------------------------~~~~~~~ 168 (284)
T 3kk8_A 162 -------------------------------------------------------------------------EAWHGFA 168 (284)
T ss_dssp -------------------------------------------------------------------------CBCCCSC
T ss_pred -------------------------------------------------------------------------ccccCCC
Confidence 0002346
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcC---CCCCCCCCCCHHHHHHHHHcccc
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDR---ILPPSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~---~lpp~~~~~~p~l~dLi~~cL~~ 568 (874)
||+.|+|||++.+..++.++|||||||++|+|++|..||.. .......+... ...+.+....+.+.+|+.+||++
T Consensus 169 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 248 (284)
T 3kk8_A 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTV 248 (284)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCS
T ss_pred CCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHccc
Confidence 88999999999999999999999999999999999999732 22223333332 22334455678899999999999
Q ss_pred CCCCCCChhHHhhhHHHHhhHhhh
Q 002843 569 EPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
||++|||+.|+|+||||+......
T Consensus 249 dp~~Rps~~~~l~h~~~~~~~~~~ 272 (284)
T 3kk8_A 249 NPKKRITADQALKVPWICNRERVA 272 (284)
T ss_dssp STTTSCCHHHHTTSHHHHSCCCGG
T ss_pred ChhhCCCHHHHhcCccccCChhHH
Confidence 999999999999999999766554
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-33 Score=322.89 Aligned_cols=213 Identities=15% Similarity=0.194 Sum_probs=171.5
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++......+.. +++||||+||+|.+++.... .+++.+++.|++
T Consensus 81 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~----------------~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~ 143 (494)
T 3lij_A 81 SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNY----------------YLVMECYKGGELFDEIIHRM-KFNEVDAAVIIK 143 (494)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEEEEECSSEE----------------EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE----------------EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHH
Confidence 4456677788888999999998876533332 56999999999999998765 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecC---CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQS---NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~---~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
||+.||+|||++||+||||||+|||++.. +.+||+|||+++.....
T Consensus 144 qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~------------------------------- 192 (494)
T 3lij_A 144 QVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ------------------------------- 192 (494)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT-------------------------------
T ss_pred HHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC-------------------------------
Confidence 99999999999999999999999999764 45999999998633200
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
......+
T Consensus 193 -------------------------------------------------------------------------~~~~~~~ 199 (494)
T 3lij_A 193 -------------------------------------------------------------------------KKMKERL 199 (494)
T ss_dssp -------------------------------------------------------------------------BCBCCCC
T ss_pred -------------------------------------------------------------------------ccccccC
Confidence 0013457
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCC---CCCCCCCCHHHHHHHHHcccc
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRIL---PPSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~l---pp~~~~~~p~l~dLi~~cL~~ 568 (874)
||++|+|||++. ..|+.++|||||||++|+|++|.+||.. ....+..+..... .+.+...++.+.+||.+||++
T Consensus 200 gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~ 278 (494)
T 3lij_A 200 GTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQF 278 (494)
T ss_dssp SCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCS
T ss_pred CCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCC
Confidence 899999999987 4699999999999999999999999842 2223344443322 334456678899999999999
Q ss_pred CCCCCCChhHHhhhHHHHhhHhh
Q 002843 569 EPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
||.+|||+.|+|+||||+.....
T Consensus 279 dp~~R~s~~e~l~hp~~~~~~~~ 301 (494)
T 3lij_A 279 DSQRRISAQQALEHPWIKEMCSK 301 (494)
T ss_dssp STTTSCCHHHHHTCHHHHHHHHH
T ss_pred ChhhCccHHHHhcCcccccCccc
Confidence 99999999999999999986543
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-34 Score=308.44 Aligned_cols=221 Identities=12% Similarity=0.150 Sum_probs=161.9
Q ss_pred HHHHHHHhHHhh-cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 257 ALKAAGAMMVAS-NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 257 ~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
.....+...+.. ..||+++.++.....+... +++||||+|++|.+++.... .+++.+++.++
T Consensus 55 ~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~ 117 (316)
T 2ac3_A 55 SRVFREVEMLYQCQGHRNVLELIEFFEEEDRF----------------YLVFEKMRGGSILSHIHKRR-HFNELEASVVV 117 (316)
T ss_dssp HHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE----------------EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE----------------EEEEEcCCCCcHHHHHhccC-CCCHHHHHHHH
Confidence 334444444544 6799999998876544332 56999999999999998765 79999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCc---EEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ---VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~---vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
.||+.||+|||++||+||||||+|||++.++. +||+|||+++....... .
T Consensus 118 ~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~-----------------------~---- 170 (316)
T 2ac3_A 118 QDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD-----------------------C---- 170 (316)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----------------------------------
T ss_pred HHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc-----------------------c----
Confidence 99999999999999999999999999998766 99999999874330000 0
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
. ..........
T Consensus 171 --------------------------~-------------------------------------------~~~~~~~~~~ 181 (316)
T 2ac3_A 171 --------------------------S-------------------------------------------PISTPELLTP 181 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------c-------------------------------------------cccccccccc
Confidence 0 0000011345
Q ss_pred cccccccCcccccC-----CCCCCccchhHHHHHHHHhcCCCCchHH-----------------HHHHHHHhhcCCCCC-
Q 002843 493 LEEKWYASPEELSG-----GVCTTSSNIYSLGVLFFELFGRFDSERA-----------------LAAAMSDLRDRILPP- 549 (874)
Q Consensus 493 ~GT~~Y~APEvl~g-----~~ys~kSDIwSLGVIL~ELltG~~p~~~-----------------~~~~~~~l~~~~lpp- 549 (874)
+||+.|+|||++.+ ..++.++|||||||++|||++|..||.. .......+.......
T Consensus 182 ~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 261 (316)
T 2ac3_A 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFP 261 (316)
T ss_dssp CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCC
T ss_pred cCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccC
Confidence 78999999999975 4589999999999999999999998743 122333343332211
Q ss_pred --CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 550 --SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 550 --~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.+....+.+.+||.+||++||.+|||+.|+|+||||+....
T Consensus 262 ~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~ 304 (316)
T 2ac3_A 262 DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP 304 (316)
T ss_dssp HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC----
T ss_pred chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCC
Confidence 12345678999999999999999999999999999987543
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=320.93 Aligned_cols=184 Identities=11% Similarity=0.025 Sum_probs=146.9
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHH------HHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIEC------LYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~------~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGla 376 (874)
.+++||||+ ++|.+++...+..+++..+ +.++.||+.||+|||++|||||||||+|||++.++.+||+|||++
T Consensus 163 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a 241 (371)
T 3q60_A 163 YLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSAL 241 (371)
T ss_dssp EEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGE
T ss_pred EEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEeccee
Confidence 478999999 8999999875445666666 788899999999999999999999999999999999999999998
Q ss_pred hhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCC
Q 002843 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (874)
Q Consensus 377 r~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~ 456 (874)
+.....
T Consensus 242 ~~~~~~-------------------------------------------------------------------------- 247 (371)
T 3q60_A 242 WKVGTR-------------------------------------------------------------------------- 247 (371)
T ss_dssp EETTCE--------------------------------------------------------------------------
T ss_pred eecCCC--------------------------------------------------------------------------
Confidence 732200
Q ss_pred CCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC--CCCCCccchhHHHHHHHHhcCCCCchHH
Q 002843 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGRFDSERA 534 (874)
Q Consensus 457 ~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g--~~ys~kSDIwSLGVIL~ELltG~~p~~~ 534 (874)
.....+|+.|+|||++.+ ..|+.++|||||||+||||++|..||..
T Consensus 248 --------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 248 --------------------------------GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp --------------------------------EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred --------------------------------ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 013356689999999987 6799999999999999999999999864
Q ss_pred HHHHHHHhhc----------CCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhhh
Q 002843 535 LAAAMSDLRD----------RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA 593 (874)
Q Consensus 535 ~~~~~~~l~~----------~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~~ 593 (874)
.......... ....+.....++.+.+||.+||++||++|||+.|+|+||||+.+.+...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~ 364 (371)
T 3q60_A 296 VTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEIS 364 (371)
T ss_dssp CCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHHHH
T ss_pred cCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHHHh
Confidence 3211100000 1112223355678999999999999999999999999999999887654
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=316.19 Aligned_cols=212 Identities=14% Similarity=0.076 Sum_probs=167.9
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.++.....++. .+++||||+|++|.+++.... .+++.+++.|+.||
T Consensus 52 ~~~E~~~l~~l~hpnIv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi 114 (323)
T 3tki_A 52 IKKEICINKMLNHENVVKFYGHRREGNI----------------QYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQL 114 (323)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEECSSE----------------EEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCeEEEEEecCCe----------------EEEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHH
Confidence 3455567777889999998876553332 256999999999999997765 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 115 ~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~---------------------------------- 160 (323)
T 3tki_A 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---------------------------------- 160 (323)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE----------------------------------
T ss_pred HHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCc----------------------------------
Confidence 9999999999999999999999999999999999999874330000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......+||+.|
T Consensus 161 -------------------------------------------------------------------~~~~~~~~gt~~y 173 (323)
T 3tki_A 161 -------------------------------------------------------------------ERLLNKMCGTLPY 173 (323)
T ss_dssp -------------------------------------------------------------------ECCBCSCCSCGGG
T ss_pred -------------------------------------------------------------------ccccCCCccCcCc
Confidence 0001345789999
Q ss_pred cCcccccCCCC-CCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 499 ASPEELSGGVC-TTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 499 ~APEvl~g~~y-s~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
+|||++.+..+ +.++|||||||++|||++|..||.... .....+.. ....+.+....+.+.+||.+||..||.+|
T Consensus 174 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 253 (323)
T 3tki_A 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 253 (323)
T ss_dssp SCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred cCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhC
Confidence 99999988775 789999999999999999999984311 11222222 22333344566788999999999999999
Q ss_pred CChhHHhhhHHHHhh
Q 002843 574 PTTREILQSEVTNEF 588 (874)
Q Consensus 574 PTa~EiL~hp~~~~~ 588 (874)
||+.|+|+||||+..
T Consensus 254 ~t~~eil~h~~~~~~ 268 (323)
T 3tki_A 254 ITIPDIKKDRWYNKP 268 (323)
T ss_dssp CCHHHHTTCTTTTCC
T ss_pred cCHHHHhhChhhccc
Confidence 999999999999853
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=299.78 Aligned_cols=209 Identities=15% Similarity=0.114 Sum_probs=161.0
Q ss_pred HHHHHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC---CCCCCHHHH
Q 002843 256 AALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIEC 331 (874)
Q Consensus 256 ~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~---~~~lse~e~ 331 (874)
......+...+... .||+++.++.....++.. +++||||+|++|.+++... ...+++.++
T Consensus 54 ~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 117 (289)
T 1x8b_A 54 EQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM----------------LIQNEYCNGGSLADAISENYRIMSYFKEAEL 117 (289)
T ss_dssp HHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE----------------EEEEECCTTCBHHHHHHHHHHHTCCCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE----------------EEEEEecCCCcHHHHHHhhcccccCCCHHHH
Confidence 33444455555555 899999998876544332 4699999999999999764 136999999
Q ss_pred HHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCC-------------------cEEEeccccchhccccccCCCCcchh
Q 002843 332 LYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN-------------------QVKYIGPIIQKETLESASLDIPHSEN 392 (874)
Q Consensus 332 ~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~-------------------~vKLiDFGlar~~~~~~~~~~~~~d~ 392 (874)
+.|+.||+.||+|||++||+||||||+|||++.++ .+||+|||++.....
T Consensus 118 ~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~----------- 186 (289)
T 1x8b_A 118 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS----------- 186 (289)
T ss_dssp HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTC-----------
T ss_pred HHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCC-----------
Confidence 99999999999999999999999999999998544 688888887653220
Q ss_pred hhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCC
Q 002843 393 YRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSK 472 (874)
Q Consensus 393 ~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~ 472 (874)
T Consensus 187 -------------------------------------------------------------------------------- 186 (289)
T 1x8b_A 187 -------------------------------------------------------------------------------- 186 (289)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccccccccccccccccccccccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCC
Q 002843 473 SSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSF 551 (874)
Q Consensus 473 s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~ 551 (874)
.....||+.|+|||++.+. .++.++|||||||++|||++|.+++..... ...+....++...
T Consensus 187 ----------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-~~~~~~~~~~~~~ 249 (289)
T 1x8b_A 187 ----------------PQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ-WHEIRQGRLPRIP 249 (289)
T ss_dssp ----------------SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-HHHHHTTCCCCCS
T ss_pred ----------------ccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-HHHHHcCCCCCCC
Confidence 0123578999999999876 567899999999999999999876543322 3445555554444
Q ss_pred CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 552 ~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
...++.+.+||.+||++||.+|||+.|+|+||||...
T Consensus 250 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 250 QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred cccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 4566889999999999999999999999999999864
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=298.74 Aligned_cols=214 Identities=18% Similarity=0.228 Sum_probs=170.2
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYI 334 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I 334 (874)
+......+..++....||+++.+......+.. .+++||||+|++|.+++.... .+++.+++.|
T Consensus 49 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i 111 (277)
T 3f3z_A 49 DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTD----------------IYLVMELCTGGELFERVVHKR-VFRESDAARI 111 (277)
T ss_dssp CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE----------------EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCe----------------EEEEEeccCCCcHHHHHHHcC-CCCHHHHHHH
Confidence 34455667778888899999998877553332 256999999999999998765 6999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEE---ecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKL---LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL---~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~ 411 (874)
+.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 112 ~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~----------------------------- 162 (277)
T 3f3z_A 112 MKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG----------------------------- 162 (277)
T ss_dssp HHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT-----------------------------
T ss_pred HHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc-----------------------------
Confidence 9999999999999999999999999999 77889999999987632200
Q ss_pred hhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccc
Q 002843 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (874)
Q Consensus 412 ~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~ 491 (874)
.....
T Consensus 163 ---------------------------------------------------------------------------~~~~~ 167 (277)
T 3f3z_A 163 ---------------------------------------------------------------------------KMMRT 167 (277)
T ss_dssp ---------------------------------------------------------------------------SCBCC
T ss_pred ---------------------------------------------------------------------------cchhc
Confidence 00024
Q ss_pred ccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCC---CCCCCCHHHHHHHHHcc
Q 002843 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPP---SFLSENPKEAGFCLWQL 566 (874)
Q Consensus 492 ~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp---~~~~~~p~l~dLi~~cL 566 (874)
..||+.|+|||++.+ .++.++|||||||++|||++|..||.. .......+.....+. .+...++.+.+||.+||
T Consensus 168 ~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 246 (277)
T 3f3z_A 168 KVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLL 246 (277)
T ss_dssp CCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHT
T ss_pred cCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHc
Confidence 468899999999876 499999999999999999999998842 222233343332221 12355678999999999
Q ss_pred ccCCCCCCChhHHhhhHHHHhhHh
Q 002843 567 HPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
++||.+|||+.++|+||||+....
T Consensus 247 ~~dp~~R~s~~~~l~h~~~~~~~~ 270 (277)
T 3f3z_A 247 TKSPKQRITSLQALEHEWFEKQLS 270 (277)
T ss_dssp CSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred cCChhhCcCHHHHhcCHHHhcccc
Confidence 999999999999999999987554
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=310.83 Aligned_cols=212 Identities=17% Similarity=0.127 Sum_probs=166.4
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.++.....++.. +++||||+|++|.+++...+ .+++.+++.++.||
T Consensus 68 ~~~E~~~l~~l~hp~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi 130 (327)
T 3a62_A 68 TKAERNILEEVKHPFIVDLIYAFQTGGKL----------------YLILEYLSGGELFMQLEREG-IFMEDTACFYLAEI 130 (327)
T ss_dssp ---HHHHHHHCCCTTBCCEEEEEECSSCE----------------EEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCccceeEEEEcCCEE----------------EEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHH
Confidence 44566777888899999988776543332 56999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 131 ~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----------------------------------- 175 (327)
T 3a62_A 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG----------------------------------- 175 (327)
T ss_dssp HHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC------------------------------------------
T ss_pred HHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC-----------------------------------
Confidence 999999999999999999999999999999999999986322000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......+||+.|
T Consensus 176 --------------------------------------------------------------------~~~~~~~gt~~y 187 (327)
T 3a62_A 176 --------------------------------------------------------------------TVTHTFCGTIEY 187 (327)
T ss_dssp -----------------------------------------------------------------------CTTSSCCTT
T ss_pred --------------------------------------------------------------------ccccccCCCcCc
Confidence 000245789999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC--
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-- 574 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP-- 574 (874)
+|||++.+..++.++|||||||++|||++|..||.. ....+..+....+. ......+.+.+||.+||..||.+||
T Consensus 188 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dp~~R~~~ 266 (327)
T 3a62_A 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN-LPPYLTQEARDLLKKLLKRNAASRLGA 266 (327)
T ss_dssp SCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC-CCTTSCHHHHHHHHHHSCSCGGGSTTS
T ss_pred cCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC-CCCCCCHHHHHHHHHHHhcCHhhccCC
Confidence 999999998899999999999999999999999842 22223333332211 1123457789999999999999999
Q ss_pred ---ChhHHhhhHHHHhhHhh
Q 002843 575 ---TTREILQSEVTNEFQEV 591 (874)
Q Consensus 575 ---Ta~EiL~hp~~~~~~~~ 591 (874)
++.|+|+||||+.+.+.
T Consensus 267 ~~~~~~e~l~hp~f~~~~~~ 286 (327)
T 3a62_A 267 GPGDAGEVQAHPFFRHINWE 286 (327)
T ss_dssp STTTHHHHHHSGGGSSCCHH
T ss_pred CCCCHHHHHcCCcccCCCHH
Confidence 78899999999976544
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=311.35 Aligned_cols=212 Identities=16% Similarity=0.140 Sum_probs=167.6
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++.....++.. +++||||+|++|.+++...+ .+++..+..|+.
T Consensus 76 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ 138 (360)
T 3eqc_A 76 NQIIRELQVLHECNSPYIVGFYGAFYSDGEI----------------SICMEHMDGGSLDQVLKKAG-RIPEQILGKVSI 138 (360)
T ss_dssp HHHHHHHGGGGGCCCTTBCCEEEEEEETTEE----------------EEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEeEEEEECCEE----------------EEEEECCCCCCHHHHHHHcC-CCCHHHHHHHHH
Confidence 4456667788888999999998876644332 56999999999999998865 699999999999
Q ss_pred HHHHHHHHHHHC-CCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 337 QIVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 337 QIl~aL~yLHs~-gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
||+.||.|||++ ||+||||||+|||++.++.+||+|||+++.....
T Consensus 139 ~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------------------------------- 185 (360)
T 3eqc_A 139 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--------------------------------- 185 (360)
T ss_dssp HHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---------------------------------
T ss_pred HHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---------------------------------
Confidence 999999999996 9999999999999999999999999998643300
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
......||
T Consensus 186 ------------------------------------------------------------------------~~~~~~gt 193 (360)
T 3eqc_A 186 ------------------------------------------------------------------------MANSFVGT 193 (360)
T ss_dssp ------------------------------------------------------------------------C----CCC
T ss_pred ------------------------------------------------------------------------cccCCCCC
Confidence 00234688
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH---------------------------------------
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--------------------------------------- 536 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--------------------------------------- 536 (874)
+.|+|||++.+..++.++|||||||++|||++|..||....
T Consensus 194 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (360)
T 3eqc_A 194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRP 273 (360)
T ss_dssp CTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------
T ss_pred CCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCC
Confidence 99999999999899999999999999999999988873210
Q ss_pred -----HHHHHhhcCCCCCCC-CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 537 -----AAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 537 -----~~~~~l~~~~lpp~~-~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.....+.....+... ...++.+.+||.+||++||++|||+.|+|+||||+....
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 333 (360)
T 3eqc_A 274 PMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA 333 (360)
T ss_dssp CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred cccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchH
Confidence 001111111111111 123567899999999999999999999999999997654
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=299.90 Aligned_cols=211 Identities=15% Similarity=0.184 Sum_probs=161.7
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.++......+. .+++|||++| +|.+++......+++.+++.++.|
T Consensus 46 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~q 108 (288)
T 1ob3_A 46 TTIREISILKELKHSNIVKLYDVIHTKKR----------------LVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108 (288)
T ss_dssp HHHHHHHGGGGCCCTTBCCEEEEEECSSC----------------EEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCCCEeeeeeEEccCCe----------------EEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHH
Confidence 34556677888899999999887654332 2569999996 999999876557999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 109 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------- 154 (288)
T 1ob3_A 109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---------------------------------- 154 (288)
T ss_dssp HHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------------------------------------
T ss_pred HHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc----------------------------------
Confidence 9999999999999999999999999999999999999987433000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......||+.
T Consensus 155 ---------------------------------------------------------------------~~~~~~~~t~~ 165 (288)
T 1ob3_A 155 ---------------------------------------------------------------------RKYTHEIVTLW 165 (288)
T ss_dssp ----------------------------------------------------------------------------CCCT
T ss_pred ---------------------------------------------------------------------ccccccccccc
Confidence 00024467899
Q ss_pred ccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhh--cCC-------------CCCC--------
Q 002843 498 YASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLR--DRI-------------LPPS-------- 550 (874)
Q Consensus 498 Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~--~~~-------------lpp~-------- 550 (874)
|+|||++.+. .++.++|||||||++|||++|..||... ......+. ... ..+.
T Consensus 166 y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (288)
T 1ob3_A 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLP 245 (288)
T ss_dssp TCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCC
T ss_pred ccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCcc
Confidence 9999999864 5899999999999999999999887321 11111111 100 0001
Q ss_pred ----CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 551 ----FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 551 ----~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
.....+.+.+||.+||++||++|||+.|+|+||||++.
T Consensus 246 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 246 WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287 (288)
T ss_dssp GGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred HHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 12245678899999999999999999999999999853
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=313.27 Aligned_cols=208 Identities=16% Similarity=0.146 Sum_probs=160.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..+++...||+++.++......+.. +++||||+||+|.+++...+ .+++.+++.|+.||
T Consensus 63 ~~~E~~~l~~l~hpniv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql 125 (361)
T 3uc3_A 63 VQREIINHRSLRHPNIVRFKEVILTPTHL----------------AIIMEYASGGELYERICNAG-RFSEDEARFFFQQL 125 (361)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEECSSEE----------------EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeCCEE----------------EEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 44556677888899999988876643332 56999999999999998766 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCc--EEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQ--VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~--vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
+.||+|||++||+||||||+|||++.++. +||+|||+++.....
T Consensus 126 ~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~---------------------------------- 171 (361)
T 3uc3_A 126 LSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH---------------------------------- 171 (361)
T ss_dssp HHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----------------------------------------
T ss_pred HHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc----------------------------------
Confidence 99999999999999999999999987765 999999988632200
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
......+||+
T Consensus 172 ----------------------------------------------------------------------~~~~~~~gt~ 181 (361)
T 3uc3_A 172 ----------------------------------------------------------------------SQPKSTVGTP 181 (361)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred ----------------------------------------------------------------------CCCCCCcCCC
Confidence 0002457899
Q ss_pred cccCcccccCCCCCCc-cchhHHHHHHHHhcCCCCchHHHH------HHHHHhhc-CCCCCCCCCCCHHHHHHHHHcccc
Q 002843 497 WYASPEELSGGVCTTS-SNIYSLGVLFFELFGRFDSERALA------AAMSDLRD-RILPPSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~k-SDIwSLGVIL~ELltG~~p~~~~~------~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~ 568 (874)
+|+|||++.+..++.+ +|||||||++|||++|..||.... ..+..+.. ....+.....++.+.+||.+||.+
T Consensus 182 ~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~ 261 (361)
T 3uc3_A 182 AYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVA 261 (361)
T ss_dssp TTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCS
T ss_pred CcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccC
Confidence 9999999998887655 999999999999999999985422 22222222 223333445678899999999999
Q ss_pred CCCCCCChhHHhhhHHHHh
Q 002843 569 EPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~ 587 (874)
||.+|||+.|+|+||||..
T Consensus 262 dP~~Rps~~ell~hp~f~~ 280 (361)
T 3uc3_A 262 DPATRISIPEIKTHSWFLK 280 (361)
T ss_dssp CTTTSCCHHHHHTSHHHHT
T ss_pred ChhHCcCHHHHHhCcchhc
Confidence 9999999999999999965
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-33 Score=300.77 Aligned_cols=217 Identities=18% Similarity=0.150 Sum_probs=161.4
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC-CCCHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIF 335 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~-~lse~e~~~I~ 335 (874)
.+.+..-..+....||+++.++........... ...+++|||+. ++|.+++..... .+++.+++.|+
T Consensus 59 ~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~-----------~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~ 126 (308)
T 3g33_A 59 VREVALLRRLEAFEHPNVVRLMDVCATSRTDRE-----------IKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLM 126 (308)
T ss_dssp HHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSE-----------EEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCc-----------eeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHH
Confidence 334444444555569999998887553332100 01267999998 599999987542 49999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 127 ~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~--------------------------------- 173 (308)
T 3g33_A 127 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ--------------------------------- 173 (308)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTC---------------------------------
T ss_pred HHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCC---------------------------------
Confidence 99999999999999999999999999999999999999998632200
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
.......||
T Consensus 174 -----------------------------------------------------------------------~~~~~~~gt 182 (308)
T 3g33_A 174 -----------------------------------------------------------------------MALTPVVVT 182 (308)
T ss_dssp -----------------------------------------------------------------------CCSGGGGCC
T ss_pred -----------------------------------------------------------------------cccCCcccc
Confidence 001345789
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc---CCCCCC--------------------
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD---RILPPS-------------------- 550 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~---~~lpp~-------------------- 550 (874)
+.|+|||++.+..++.++|||||||++|||++|.+||... ...+..+.. ......
T Consensus 183 ~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (308)
T 3g33_A 183 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPV 262 (308)
T ss_dssp CSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCH
T ss_pred ccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcH
Confidence 9999999999989999999999999999999999988321 111222211 111000
Q ss_pred ---CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 551 ---FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 551 ---~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.....+.+.+||.+||++||.+|||+.|+|+||||+...
T Consensus 263 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 263 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp HHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred HHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 123446788999999999999999999999999998644
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=322.00 Aligned_cols=249 Identities=15% Similarity=0.167 Sum_probs=166.6
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYI 334 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I 334 (874)
+..+...+..++....||+++.+++......... ....+++||||. ++|.+++.... .+++.+++.|
T Consensus 95 ~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~-----------~~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~~ 161 (458)
T 3rp9_A 95 DCKRILREIAILNRLNHDHVVKVLDIVIPKDVEK-----------FDELYVVLEIAD-SDFKKLFRTPV-YLTELHIKTL 161 (458)
T ss_dssp HHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT-----------CCCEEEEECCCS-EEHHHHHHSSC-CCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCceEEEEecCCccc-----------CceEEEEEeccc-cchhhhcccCC-CCCHHHHHHH
Confidence 4445667778888889999999988754322111 011368999986 79999998765 7999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
++||+.||+|||++|||||||||+||||+.++.+||+|||+++...........
T Consensus 162 ~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~-------------------------- 215 (458)
T 3rp9_A 162 LYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQ-------------------------- 215 (458)
T ss_dssp HHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCC--------------------------
T ss_pred HHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccc--------------------------
Confidence 999999999999999999999999999999999999999999854411000000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
.... .... ......|.. ........+..+|
T Consensus 216 ---------------~~~~----~~~~----------------------~~~~~~~~~---------~~~~~~~~~~~~g 245 (458)
T 3rp9_A 216 ---------------LPIS----PRED----------------------DMNLVTFPH---------TKNLKRQLTGHVV 245 (458)
T ss_dssp ---------------CC--------------------------------------------------------------C
T ss_pred ---------------cccC----cccc----------------------ccccccccc---------cccccccccCCcc
Confidence 0000 0000 000000000 0000112357799
Q ss_pred cccccCccccc-CCCCCCccchhHHHHHHHHhcC-----------CCCchHHHH----------------------HHHH
Q 002843 495 EKWYASPEELS-GGVCTTSSNIYSLGVLFFELFG-----------RFDSERALA----------------------AAMS 540 (874)
Q Consensus 495 T~~Y~APEvl~-g~~ys~kSDIwSLGVIL~ELlt-----------G~~p~~~~~----------------------~~~~ 540 (874)
|++|+|||++. +..|+.++||||||||||||++ |.++|.... ..+.
T Consensus 246 t~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 325 (458)
T 3rp9_A 246 TRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLN 325 (458)
T ss_dssp CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHH
T ss_pred cccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHH
Confidence 99999999864 5569999999999999999998 444442211 0000
Q ss_pred Hh---hc-------------------CCC--------CCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 541 DL---RD-------------------RIL--------PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 541 ~l---~~-------------------~~l--------pp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.+ .. ..+ ...+...++.+.+||.+||.+||++|||+.|+|+||||+.+..
T Consensus 326 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~ 405 (458)
T 3rp9_A 326 VIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI 405 (458)
T ss_dssp HHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred HHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence 00 00 001 1123445678999999999999999999999999999998865
Q ss_pred hh
Q 002843 591 VC 592 (874)
Q Consensus 591 ~~ 592 (874)
..
T Consensus 406 ~~ 407 (458)
T 3rp9_A 406 AE 407 (458)
T ss_dssp GG
T ss_pred Cc
Confidence 54
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-34 Score=325.97 Aligned_cols=213 Identities=15% Similarity=0.133 Sum_probs=167.4
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......++.. +++||||+|++|.+++...+ .+++.+++.|+.||
T Consensus 195 ~~~e~~~l~~l~h~~iv~l~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi 257 (446)
T 4ejn_A 195 TLTENRVLQNSRHPFLTALKYSFQTHDRL----------------CFVMEYANGGELFFHLSRER-VFSEDRARFYGAEI 257 (446)
T ss_dssp ------CCCCCSCTTSCCEEEEEEETTEE----------------EEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEeeEEEEEeeCCEE----------------EEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 44566677888899999888776544432 56999999999999998765 79999999999999
Q ss_pred HHHHHHHHH-CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 339 VALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 339 l~aL~yLHs-~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
+.||+|||+ +|||||||||+||||+.++.+||+|||+++......
T Consensus 258 ~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---------------------------------- 303 (446)
T 4ejn_A 258 VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------------------------- 303 (446)
T ss_dssp HHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC------------------------------------
T ss_pred HHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC----------------------------------
Confidence 999999998 999999999999999999999999999986322000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
......+||+.
T Consensus 304 ---------------------------------------------------------------------~~~~~~~gt~~ 314 (446)
T 4ejn_A 304 ---------------------------------------------------------------------ATMKTFCGTPE 314 (446)
T ss_dssp ------------------------------------------------------------------------CCSSSCGG
T ss_pred ---------------------------------------------------------------------cccccccCCcc
Confidence 00134679999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC-
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP- 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP- 574 (874)
|+|||++.+..|+.++|||||||+||||++|..||.. .......+.....+ ......+.+.+||.+||++||.+||
T Consensus 315 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dP~~R~~ 393 (446)
T 4ejn_A 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR-FPRTLGPEAKSLLSGLLKKDPKQRLG 393 (446)
T ss_dssp GCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSSTTTSTT
T ss_pred ccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCC-CCccCCHHHHHHHHHHcccCHHHhCC
Confidence 9999999999999999999999999999999999832 22223333322211 1123457899999999999999999
Q ss_pred ----ChhHHhhhHHHHhhHhhh
Q 002843 575 ----TTREILQSEVTNEFQEVC 592 (874)
Q Consensus 575 ----Ta~EiL~hp~~~~~~~~~ 592 (874)
++.|+|+||||+.+....
T Consensus 394 ~~~~t~~ell~hp~f~~~~~~~ 415 (446)
T 4ejn_A 394 GGSEDAKEIMQHRFFAGIVWQH 415 (446)
T ss_dssp CSTTTHHHHHTSGGGTTCCHHH
T ss_pred CCCCCHHHHHhCccccCCCHHH
Confidence 999999999999875543
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-34 Score=315.33 Aligned_cols=206 Identities=16% Similarity=0.192 Sum_probs=164.4
Q ss_pred hHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~ 343 (874)
.+.....||+++.+.......... +++||||+||+|.+++...+ .+++.+++.|+.||+.||+
T Consensus 68 ~l~~~~~hp~iv~~~~~~~~~~~~----------------~lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~ 130 (342)
T 2qr7_A 68 ILLRYGQHPNIITLKDVYDDGKYV----------------YVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVE 130 (342)
T ss_dssp HHHHHTTSTTBCCEEEEEECSSEE----------------EEEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCcCeEEEEEEcCCEE----------------EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHH
Confidence 455556899999988876533322 56999999999999998776 7999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEecC----CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQS----NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~~----~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
|||++||+||||||+|||+... +.+||+|||+++......
T Consensus 131 ~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------ 174 (342)
T 2qr7_A 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN------------------------------------ 174 (342)
T ss_dssp HHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT------------------------------------
T ss_pred HHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC------------------------------------
Confidence 9999999999999999998543 359999999987433000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
......+||+.|+
T Consensus 175 -------------------------------------------------------------------~~~~~~~gt~~y~ 187 (342)
T 2qr7_A 175 -------------------------------------------------------------------GLLMTPCYTANFV 187 (342)
T ss_dssp -------------------------------------------------------------------CCBCCSSCCSSCC
T ss_pred -------------------------------------------------------------------CceeccCCCcccc
Confidence 0002457899999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHH-----HHHHHHHhhcCCCC---CCCCCCCHHHHHHHHHccccCCC
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA-----LAAAMSDLRDRILP---PSFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~-----~~~~~~~l~~~~lp---p~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
|||++.+..|+.++|||||||++|||++|..||.. ....+..+.....+ +.+...++.+.+||.+||+.||+
T Consensus 188 aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 267 (342)
T 2qr7_A 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPH 267 (342)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTT
T ss_pred CHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChh
Confidence 99999987899999999999999999999999842 23344444443322 22345668899999999999999
Q ss_pred CCCChhHHhhhHHHHhhH
Q 002843 572 SRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~~~~ 589 (874)
+||++.|+|+||||....
T Consensus 268 ~R~t~~~il~hp~~~~~~ 285 (342)
T 2qr7_A 268 QRLTAALVLRHPWIVHWD 285 (342)
T ss_dssp TSCCHHHHTTSHHHHTGG
T ss_pred HCcCHHHHhcCCeecCcc
Confidence 999999999999997643
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-34 Score=311.57 Aligned_cols=211 Identities=14% Similarity=0.142 Sum_probs=160.9
Q ss_pred HHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHH
Q 002843 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (874)
Q Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~a 341 (874)
+..++....||+++.+......+.. .+++||||+ ++|.+++...+..+++.+++.|+.||+.|
T Consensus 50 E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~a 112 (324)
T 3mtl_A 50 EVSLLKDLKHANIVTLHDIIHTEKS----------------LTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRG 112 (324)
T ss_dssp CHHHHSCCCCTTBCCEEEEEECSSC----------------EEEEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCeeeeEEeeCCE----------------EEEEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 4456677789999988877553332 257999998 59999998876689999999999999999
Q ss_pred HHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccc
Q 002843 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (874)
Q Consensus 342 L~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~ 421 (874)
|+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 113 L~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--------------------------------------- 153 (324)
T 3mtl_A 113 LAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP--------------------------------------- 153 (324)
T ss_dssp HHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC------------------------------------------
T ss_pred HHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC---------------------------------------
Confidence 99999999999999999999999999999999998632200
Q ss_pred ccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCc
Q 002843 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (874)
Q Consensus 422 ~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~AP 501 (874)
........||++|+||
T Consensus 154 ----------------------------------------------------------------~~~~~~~~~t~~y~aP 169 (324)
T 3mtl_A 154 ----------------------------------------------------------------TKTYDNEVVTLWYRPP 169 (324)
T ss_dssp -------------------------------------------------------------------------CGGGCCH
T ss_pred ----------------------------------------------------------------ccccccccCcccccCh
Confidence 0001244778999999
Q ss_pred ccccC-CCCCCccchhHHHHHHHHhcCCCCchHHH-----HHHHHHhhcCCCCCC-------------------------
Q 002843 502 EELSG-GVCTTSSNIYSLGVLFFELFGRFDSERAL-----AAAMSDLRDRILPPS------------------------- 550 (874)
Q Consensus 502 Evl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~-----~~~~~~l~~~~lpp~------------------------- 550 (874)
|++.+ ..++.++|||||||++|||++|..||... ...+..+.....+..
T Consensus 170 E~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (324)
T 3mtl_A 170 DILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLS 249 (324)
T ss_dssp HHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHH
T ss_pred hhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhh
Confidence 99987 46899999999999999999999888321 111111111111111
Q ss_pred -CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 551 -FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 551 -~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
.....+.+.+||.+||++||.+|||+.|+|+||||..+.+..
T Consensus 250 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~ 292 (324)
T 3mtl_A 250 HAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERI 292 (324)
T ss_dssp HCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTT
T ss_pred hcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccccc
Confidence 112356788999999999999999999999999999876543
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=319.67 Aligned_cols=208 Identities=19% Similarity=0.206 Sum_probs=159.3
Q ss_pred hHHhhcCCCCCceeccceee--cCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVS--NGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVA 340 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~ 340 (874)
.+.+...||+++.+++.... .+... .+++||||+||+|.++|...+ ..+++.+++.|+.||+.
T Consensus 107 ~~~~~~~hp~iv~l~~~~~~~~~~~~~--------------~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~ 172 (400)
T 1nxk_A 107 LHWRASQCPHIVRIVDVYENLYAGRKC--------------LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172 (400)
T ss_dssp HHHHHTTSTTBCCEEEEEEEEETTEEE--------------EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCcceEeEEEeecccCCcE--------------EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 44566789999988776442 11111 267999999999999998753 36999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEec---CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQ---SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~---~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
||+|||++||+||||||+|||++. ++.+||+|||+++.....
T Consensus 173 aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~----------------------------------- 217 (400)
T 1nxk_A 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH----------------------------------- 217 (400)
T ss_dssp HHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-------------------------------------
T ss_pred HHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCC-----------------------------------
Confidence 999999999999999999999997 788999999998732200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
...+..+||++
T Consensus 218 ---------------------------------------------------------------------~~~~~~~gt~~ 228 (400)
T 1nxk_A 218 ---------------------------------------------------------------------NSLTTPCYTPY 228 (400)
T ss_dssp ------------------------------------------------------------------------------CT
T ss_pred ---------------------------------------------------------------------CccccCCCCCC
Confidence 00134578999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH------HHHHhhcC---CCCCCCCCCCHHHHHHHHHcccc
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA------AMSDLRDR---ILPPSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~------~~~~l~~~---~lpp~~~~~~p~l~dLi~~cL~~ 568 (874)
|+|||++.+..|+.++||||||||||||++|..||..... ....+... ...+.+...++.+.+||.+||+.
T Consensus 229 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~ 308 (400)
T 1nxk_A 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 308 (400)
T ss_dssp TCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCS
T ss_pred ccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCC
Confidence 9999999998999999999999999999999998843210 12222222 12233455678899999999999
Q ss_pred CCCCCCChhHHhhhHHHHhhH
Q 002843 569 EPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~~~ 589 (874)
||.+|||+.|+|+||||....
T Consensus 309 dP~~Rpt~~eil~hp~~~~~~ 329 (400)
T 1nxk_A 309 EPTQRMTITEFMNHPWIMQST 329 (400)
T ss_dssp SGGGSCCHHHHHHSHHHHTTT
T ss_pred ChhHCcCHHHHhcCccccCCC
Confidence 999999999999999998643
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=299.77 Aligned_cols=212 Identities=16% Similarity=0.165 Sum_probs=162.9
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC---CCCCCHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIEC 331 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~---~~~lse~e~ 331 (874)
.......+...+....||+++.++........ .+++||||+|++|.+++... +..+++.++
T Consensus 63 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 126 (285)
T 3is5_A 63 PMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHN----------------MYIVMETCEGGELLERIVSAQARGKALSEGYV 126 (285)
T ss_dssp CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE----------------EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHH
T ss_pred hHHHHHHHHHHHHhCCCchHHhHHHheecCCe----------------EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHH
Confidence 33445566677888899999998877553332 25699999999999999542 347999999
Q ss_pred HHHHHHHHHHHHHHHHCCCcccCCCCCceEEe---cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhcccc
Q 002843 332 LYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL---QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTG 408 (874)
Q Consensus 332 ~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~---~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~ 408 (874)
+.|+.||+.||+|||++||+||||||+|||++ .++.+||+|||+++.....
T Consensus 127 ~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~-------------------------- 180 (285)
T 3is5_A 127 AELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD-------------------------- 180 (285)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------------------------------
T ss_pred HHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc--------------------------
Confidence 99999999999999999999999999999994 4578999999998633200
Q ss_pred chhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccc
Q 002843 409 IASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTS 488 (874)
Q Consensus 409 ~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~ 488 (874)
..
T Consensus 181 ------------------------------------------------------------------------------~~ 182 (285)
T 3is5_A 181 ------------------------------------------------------------------------------EH 182 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred cccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhh--cCCCCCCCCCCCHHHHHHHHH
Q 002843 489 VSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLR--DRILPPSFLSENPKEAGFCLW 564 (874)
Q Consensus 489 ~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~--~~~lpp~~~~~~p~l~dLi~~ 564 (874)
.....||+.|+|||++. +.++.++|||||||++|||++|..||.... ....... ....+.......+.+.+||.+
T Consensus 183 ~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 261 (285)
T 3is5_A 183 STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQ 261 (285)
T ss_dssp ----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHH
T ss_pred CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHH
Confidence 02446889999999986 468999999999999999999999984321 1122222 222333334456889999999
Q ss_pred ccccCCCCCCChhHHhhhHHHHh
Q 002843 565 QLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 565 cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
||++||++|||+.|+|+||||++
T Consensus 262 ~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 262 MLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HTCSCTTTSCCHHHHHTSGGGGC
T ss_pred HccCChhhCcCHHHHhcCHHhhc
Confidence 99999999999999999999975
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=319.08 Aligned_cols=212 Identities=16% Similarity=0.217 Sum_probs=169.8
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
......+..++....||+++.++......... +++||||.|++|.+++...+ .+++.+++.|+
T Consensus 65 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~ 127 (486)
T 3mwu_A 65 TSTILREVELLKKLDHPNIMKLFEILEDSSSF----------------YIVGELYTGGELFDEIIKRK-RFSEHDAARII 127 (486)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE----------------EEEECCCCSCBHHHHHHHHS-SCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEE----------------EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHH
Confidence 34455667788888999999998775533322 56999999999999998765 79999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEe---cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLL---QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~---~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
+||+.||.|||++||+||||||+|||++ .++.+||+|||+++.....
T Consensus 128 ~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~------------------------------ 177 (486)
T 3mwu_A 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN------------------------------ 177 (486)
T ss_dssp HHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC------------------------------
T ss_pred HHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC------------------------------
Confidence 9999999999999999999999999995 4567999999998633200
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
......
T Consensus 178 --------------------------------------------------------------------------~~~~~~ 183 (486)
T 3mwu_A 178 --------------------------------------------------------------------------TKMKDR 183 (486)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred --------------------------------------------------------------------------CccCCC
Confidence 001345
Q ss_pred cccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCC---CCCCCCCHHHHHHHHHccc
Q 002843 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILP---PSFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 493 ~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lp---p~~~~~~p~l~dLi~~cL~ 567 (874)
+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.. ....+..+.....+ +.+...++.+.+||.+||+
T Consensus 184 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~ 262 (486)
T 3mwu_A 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262 (486)
T ss_dssp TTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTC
T ss_pred cCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcC
Confidence 78999999999986 599999999999999999999999832 22234444443322 3344567889999999999
Q ss_pred cCCCCCCChhHHhhhHHHHhhH
Q 002843 568 PEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+||.+|||+.|+|+||||+...
T Consensus 263 ~dp~~R~t~~~~l~hp~~~~~~ 284 (486)
T 3mwu_A 263 FHPSLRITATQCLEHPWIQKYS 284 (486)
T ss_dssp SSTTTSCCHHHHHHCHHHHHTC
T ss_pred CChhhCcCHHHHhcCHhhccCc
Confidence 9999999999999999998754
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=316.59 Aligned_cols=213 Identities=16% Similarity=0.121 Sum_probs=170.4
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.++......... +++||||.||+|.+++...+ .+++.+++.|+.|
T Consensus 61 ~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~----------------~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~q 123 (384)
T 4fr4_A 61 NVFKELQIMQGLEHPFLVNLWYSFQDEEDM----------------FMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICE 123 (384)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEEECSSEE----------------EEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEEEeCCEE----------------EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHH
Confidence 345566778888999999998776544332 46999999999999998765 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||++||+||||||+||||+.++.+||+|||+++.+...
T Consensus 124 i~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~----------------------------------- 168 (384)
T 4fr4_A 124 LVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----------------------------------- 168 (384)
T ss_dssp HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-----------------------------------
T ss_pred HHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCC-----------------------------------
Confidence 999999999999999999999999999999999999998633200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
......+||+.
T Consensus 169 ---------------------------------------------------------------------~~~~~~~gt~~ 179 (384)
T 4fr4_A 169 ---------------------------------------------------------------------TQITTMAGTKP 179 (384)
T ss_dssp ---------------------------------------------------------------------CCBCCCCSCGG
T ss_pred ---------------------------------------------------------------------CceeccCCCcc
Confidence 00135679999
Q ss_pred ccCcccccC---CCCCCccchhHHHHHHHHhcCCCCchHH-----HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccC
Q 002843 498 YASPEELSG---GVCTTSSNIYSLGVLFFELFGRFDSERA-----LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 498 Y~APEvl~g---~~ys~kSDIwSLGVIL~ELltG~~p~~~-----~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~d 569 (874)
|+|||++.+ ..|+.++|||||||+||||++|..||.. .......+.... .......++.+.+||.+||+.|
T Consensus 180 Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~-~~~p~~~s~~~~~li~~lL~~d 258 (384)
T 4fr4_A 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV-VTYPSAWSQEMVSLLKKLLEPN 258 (384)
T ss_dssp GCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHSCSS
T ss_pred ccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcc-cCCCCcCCHHHHHHHHHHhcCC
Confidence 999999974 4589999999999999999999999841 122222222221 1112234578999999999999
Q ss_pred CCCCCC-hhHHhhhHHHHhhHhhh
Q 002843 570 PLSRPT-TREILQSEVTNEFQEVC 592 (874)
Q Consensus 570 P~~RPT-a~EiL~hp~~~~~~~~~ 592 (874)
|.+||+ +.++++||||+.+.+..
T Consensus 259 P~~R~s~~~~l~~hp~f~~~~w~~ 282 (384)
T 4fr4_A 259 PDQRFSQLSDVQNFPYMNDINWDA 282 (384)
T ss_dssp GGGSCCSHHHHHTSGGGTTCCHHH
T ss_pred HhHhcccHHHHHcChhhhcCCHHH
Confidence 999998 89999999999877654
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-33 Score=311.41 Aligned_cols=218 Identities=14% Similarity=0.198 Sum_probs=168.0
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
..+...+..++....||+++.+.+....+..... ....+++|||| |++|.++++.. .+++.++..++
T Consensus 68 ~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~----------~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~ 134 (367)
T 1cm8_A 68 AKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD----------FTDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLV 134 (367)
T ss_dssp HHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT----------CCCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc----------CceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHH
Confidence 3445667778888899999998877553322110 01136899999 79999999874 69999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
+||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 135 ~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------------------------------- 180 (367)
T 1cm8_A 135 YQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS---------------------------------- 180 (367)
T ss_dssp HHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS----------------------------------
T ss_pred HHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccccc----------------------------------
Confidence 9999999999999999999999999999999999999999863220
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
..+..+||
T Consensus 181 ------------------------------------------------------------------------~~~~~~~t 188 (367)
T 1cm8_A 181 ------------------------------------------------------------------------EMTGYVVT 188 (367)
T ss_dssp ------------------------------------------------------------------------SCCSSCSC
T ss_pred ------------------------------------------------------------------------ccCcCcCC
Confidence 00345789
Q ss_pred ccccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc----------------------------
Q 002843 496 KWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD---------------------------- 544 (874)
Q Consensus 496 ~~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~---------------------------- 544 (874)
++|+|||++.+ ..|+.++|||||||++|||++|..||.... ..+..+..
T Consensus 189 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (367)
T 1cm8_A 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL 268 (367)
T ss_dssp GGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCC
T ss_pred CCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCC
Confidence 99999999987 679999999999999999999998873211 11111110
Q ss_pred --CCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 545 --RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 545 --~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
..+...+....+.+.+||.+||..||.+|||+.|+|+||||+.+.+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~~ 318 (367)
T 1cm8_A 269 EKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTE 318 (367)
T ss_dssp CCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC---
T ss_pred CCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCCc
Confidence 001112234567899999999999999999999999999999876544
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=306.72 Aligned_cols=215 Identities=16% Similarity=0.173 Sum_probs=171.0
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
......+..++....||+++.+......... .+++||||+|++|.+++...+ .+++.+++.|+
T Consensus 59 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~ 121 (321)
T 2a2a_A 59 REEIEREVSILRQVLHHNVITLHDVYENRTD----------------VVLILELVSGGELFDFLAQKE-SLSEEEATSFI 121 (321)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEEECSSE----------------EEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcceEEEEEecCCE----------------EEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHH
Confidence 3445556677788889999988877553332 256999999999999998765 79999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCC----cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSN----QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~----~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~ 411 (874)
.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.....
T Consensus 122 ~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~----------------------------- 172 (321)
T 2a2a_A 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG----------------------------- 172 (321)
T ss_dssp HHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTT-----------------------------
T ss_pred HHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCcc-----------------------------
Confidence 9999999999999999999999999999887 7999999998643200
Q ss_pred hhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccc
Q 002843 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (874)
Q Consensus 412 ~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~ 491 (874)
.....
T Consensus 173 ---------------------------------------------------------------------------~~~~~ 177 (321)
T 2a2a_A 173 ---------------------------------------------------------------------------VEFKN 177 (321)
T ss_dssp ---------------------------------------------------------------------------CCCCC
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 00023
Q ss_pred ccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCC--CCC-CCCCCHHHHHHHHHcc
Q 002843 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRIL--PPS-FLSENPKEAGFCLWQL 566 (874)
Q Consensus 492 ~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~l--pp~-~~~~~p~l~dLi~~cL 566 (874)
..||+.|+|||++.+..++.++|||||||++|+|++|..||.. ....+..+..... ++. +...++.+.+||.+||
T Consensus 178 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l 257 (321)
T 2a2a_A 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLL 257 (321)
T ss_dssp CCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTS
T ss_pred cCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHc
Confidence 4688999999999998999999999999999999999999832 2223333333222 111 2345577899999999
Q ss_pred ccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 567 HPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
++||.+|||+.|+|+||||......
T Consensus 258 ~~dp~~Rps~~e~l~hp~~~~~~~~ 282 (321)
T 2a2a_A 258 VKETRKRLTIQEALRHPWITPVDNQ 282 (321)
T ss_dssp CSSTTTSCCHHHHHHSTTTSCSSHH
T ss_pred CCChhhCcCHHHHhcCccccCCCcc
Confidence 9999999999999999999865543
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=321.03 Aligned_cols=213 Identities=17% Similarity=0.097 Sum_probs=171.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.++.....+... +++||||+||+|.+++... .+++..++.|+.||
T Consensus 116 ~~~E~~il~~l~hp~Iv~l~~~~~~~~~~----------------~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi 177 (410)
T 3v8s_A 116 FWEERDIMAFANSPWVVQLFYAFQDDRYL----------------YMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEV 177 (410)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEECSSEE----------------EEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCeEEEEEEECCEE----------------EEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHH
Confidence 44566677788999999998776543332 5699999999999999875 59999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++|||||||||+|||++.++.+||+|||+++.+.....
T Consensus 178 ~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~---------------------------------- 223 (410)
T 3v8s_A 178 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM---------------------------------- 223 (410)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE----------------------------------
T ss_pred HHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc----------------------------------
Confidence 9999999999999999999999999999999999999874330000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......+||+.|
T Consensus 224 --------------------------------------------------------------------~~~~~~~gt~~Y 235 (410)
T 3v8s_A 224 --------------------------------------------------------------------VRCDTAVGTPDY 235 (410)
T ss_dssp --------------------------------------------------------------------EECCSCCSCGGG
T ss_pred --------------------------------------------------------------------ccccCCcCCccc
Confidence 001356899999
Q ss_pred cCcccccCCC----CCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhc---CCCCCCCCCCCHHHHHHHHHccccC
Q 002843 499 ASPEELSGGV----CTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRD---RILPPSFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 499 ~APEvl~g~~----ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~---~~lpp~~~~~~p~l~dLi~~cL~~d 569 (874)
+|||++.+.. |+.++|||||||+||||++|..||.. .......+.. ....|.....++.+.+||.+||..+
T Consensus 236 ~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~ 315 (410)
T 3v8s_A 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDR 315 (410)
T ss_dssp CCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCG
T ss_pred cCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccCh
Confidence 9999998755 88999999999999999999999842 2223333332 2233444456788999999999999
Q ss_pred CCC--CCChhHHhhhHHHHhhHhh
Q 002843 570 PLS--RPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 570 P~~--RPTa~EiL~hp~~~~~~~~ 591 (874)
|.+ ||++.||++||||+.+.+.
T Consensus 316 ~~rlgR~~~~ei~~Hp~f~~~~w~ 339 (410)
T 3v8s_A 316 EVRLGRNGVEEIKRHLFFKNDQWA 339 (410)
T ss_dssp GGCTTSSCHHHHHTSGGGCCSSCC
T ss_pred hhhCCCCCHHHHhcCccccCCCHH
Confidence 988 9999999999999987643
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=314.86 Aligned_cols=207 Identities=15% Similarity=0.121 Sum_probs=167.4
Q ss_pred HHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHH
Q 002843 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (874)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~y 344 (874)
++....||+++.+.......... +++||||+||+|.++|.+.+ .+++..++.|+.||+.||+|
T Consensus 92 ll~~~~hp~Iv~l~~~~~~~~~~----------------~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~ 154 (373)
T 2r5t_A 92 LLKNVKHPFLVGLHFSFQTADKL----------------YFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGY 154 (373)
T ss_dssp CBCCCCCTTBCCEEEEEECSSEE----------------EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCEEEEEEeCCEE----------------EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Confidence 45677899999888776543332 56999999999999998765 79999999999999999999
Q ss_pred HHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccc
Q 002843 345 HHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (874)
Q Consensus 345 LHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~ 424 (874)
||++||+||||||+|||++.++++||+|||+++......
T Consensus 155 LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~----------------------------------------- 193 (373)
T 2r5t_A 155 LHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN----------------------------------------- 193 (373)
T ss_dssp HHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC-----------------------------------------
T ss_pred HHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC-----------------------------------------
Confidence 999999999999999999999999999999987422000
Q ss_pred cccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccc
Q 002843 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (874)
Q Consensus 425 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl 504 (874)
......+||+.|+|||++
T Consensus 194 --------------------------------------------------------------~~~~~~~gt~~y~aPE~~ 211 (373)
T 2r5t_A 194 --------------------------------------------------------------STTSTFCGTPEYLAPEVL 211 (373)
T ss_dssp --------------------------------------------------------------CCCCSBSCCCCCCCHHHH
T ss_pred --------------------------------------------------------------CccccccCCccccCHHHh
Confidence 001356899999999999
Q ss_pred cCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh----hH
Q 002843 505 SGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT----RE 578 (874)
Q Consensus 505 ~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa----~E 578 (874)
.+..|+.++|||||||++|||++|..||.. .......+....+. ......+.+.+||.+||+.||.+||++ .+
T Consensus 212 ~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 212 HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQ-LKPNITNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp TTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCC-CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred CCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 999999999999999999999999999832 22333344333221 112345778999999999999999997 58
Q ss_pred HhhhHHHHhhHhhh
Q 002843 579 ILQSEVTNEFQEVC 592 (874)
Q Consensus 579 iL~hp~~~~~~~~~ 592 (874)
+++||||+.+.+..
T Consensus 291 i~~h~~f~~~~w~~ 304 (373)
T 2r5t_A 291 IKSHVFFSLINWDD 304 (373)
T ss_dssp HHTSGGGTTCCHHH
T ss_pred HhCCccccCCCHHH
Confidence 99999999877654
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=319.20 Aligned_cols=215 Identities=16% Similarity=0.094 Sum_probs=168.4
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......+... +++||||+||+|.++|.+.+..+++..++.|+.||
T Consensus 108 ~~~E~~il~~~~hp~Iv~l~~~~~~~~~~----------------~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi 171 (412)
T 2vd5_A 108 FREERDVLVNGDRRWITQLHFAFQDENYL----------------YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEI 171 (412)
T ss_dssp HHHHHHHHHHSCTTTBCCEEEEEECSSEE----------------EEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCeeeEEEEEeeCCEE----------------EEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 34455666777899999888776543332 56999999999999998765579999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++|||||||||+|||++.++++||+|||+++......
T Consensus 172 ~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~----------------------------------- 216 (412)
T 2vd5_A 172 VMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG----------------------------------- 216 (412)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS-----------------------------------
T ss_pred HHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCC-----------------------------------
Confidence 999999999999999999999999999999999999987433000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......+||+.|
T Consensus 217 -------------------------------------------------------------------~~~~~~~~Gt~~Y 229 (412)
T 2vd5_A 217 -------------------------------------------------------------------TVRSLVAVGTPDY 229 (412)
T ss_dssp -------------------------------------------------------------------CEECSSCCSCGGG
T ss_pred -------------------------------------------------------------------ccccceeccccCc
Confidence 0000245899999
Q ss_pred cCccccc-------CCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhc----CCCCCCCCCCCHHHHHHHHHc
Q 002843 499 ASPEELS-------GGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRD----RILPPSFLSENPKEAGFCLWQ 565 (874)
Q Consensus 499 ~APEvl~-------g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~----~~lpp~~~~~~p~l~dLi~~c 565 (874)
+|||++. +..|+.++|||||||++|||++|..||.. ....+..+.. ..+|......++.+.+||.+|
T Consensus 230 ~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~l 309 (412)
T 2vd5_A 230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRL 309 (412)
T ss_dssp CCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTT
T ss_pred CCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHH
Confidence 9999997 35689999999999999999999999842 2222333322 223322345568899999999
Q ss_pred cccCCCCC---CChhHHhhhHHHHhhHhhh
Q 002843 566 LHPEPLSR---PTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 566 L~~dP~~R---PTa~EiL~hp~~~~~~~~~ 592 (874)
|. +|.+| |++.|+++||||+.+.+..
T Consensus 310 L~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~ 338 (412)
T 2vd5_A 310 LC-PPETRLGRGGAGDFRTHPFFFGLDWDG 338 (412)
T ss_dssp SS-CGGGCTTTTTHHHHHTSGGGTTCCSTT
T ss_pred cC-ChhhcCCCCCHHHHhcCCCcCCCCHHH
Confidence 99 99998 5999999999999876654
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-33 Score=297.94 Aligned_cols=213 Identities=15% Similarity=0.077 Sum_probs=168.0
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
......+..++....||+++.+++......... ...+++||||+|++|.+++...+ .+++..++.|+
T Consensus 69 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~------------~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~ 135 (290)
T 1t4h_A 69 RQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK------------KCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWC 135 (290)
T ss_dssp HHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSC------------EEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCeeeeeeeeccccCCC------------ceEEEEEEecCCCCHHHHHHHcc-CCCHHHHHHHH
Confidence 344556677888889999998887644221100 00267999999999999998765 79999999999
Q ss_pred HHHHHHHHHHHHCC--CcccCCCCCceEEe-cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 336 RQIVALVDYHHTQG--VTFLDLKPSSFKLL-QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 336 ~QIl~aL~yLHs~g--IIHRDLKPsNILL~-~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
.||+.||.|||++| |+||||||+|||++ .++.+||+|||++......
T Consensus 136 ~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~------------------------------ 185 (290)
T 1t4h_A 136 RQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS------------------------------ 185 (290)
T ss_dssp HHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT------------------------------
T ss_pred HHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc------------------------------
Confidence 99999999999999 99999999999998 7899999999987532200
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
.....
T Consensus 186 ---------------------------------------------------------------------------~~~~~ 190 (290)
T 1t4h_A 186 ---------------------------------------------------------------------------FAKAV 190 (290)
T ss_dssp ---------------------------------------------------------------------------SBEES
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 00234
Q ss_pred cccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH---HHHHHHHhhcCCCCCCCCC-CCHHHHHHHHHcccc
Q 002843 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA---LAAAMSDLRDRILPPSFLS-ENPKEAGFCLWQLHP 568 (874)
Q Consensus 493 ~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~---~~~~~~~l~~~~lpp~~~~-~~p~l~dLi~~cL~~ 568 (874)
.||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .......+.....+..+.. ..+.+.+||.+||+.
T Consensus 191 ~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 269 (290)
T 1t4h_A 191 IGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQ 269 (290)
T ss_dssp CSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCS
T ss_pred cCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccC
Confidence 68899999998875 699999999999999999999988843 2333444444444444333 347799999999999
Q ss_pred CCCCCCChhHHhhhHHHHh
Q 002843 569 EPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~ 587 (874)
||.+|||+.|+|+||||++
T Consensus 270 dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 270 NKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp SGGGSCCHHHHHTSGGGC-
T ss_pred ChhhCCCHHHHhhCccccc
Confidence 9999999999999999975
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=298.47 Aligned_cols=209 Identities=14% Similarity=0.083 Sum_probs=165.7
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.++......+. .+++|||++|++|.+++.... .+++.+++.|+.||
T Consensus 56 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi 118 (279)
T 3fdn_A 56 LRREVEIQSHLRHPNILRLYGYFHDATR----------------VYLILEYAPLGTVYRELQKLS-KFDEQRTATYITEL 118 (279)
T ss_dssp HHHHHHHHTTCCCTTBCCEEEEEECSSE----------------EEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcchhheEecCCE----------------EEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 4445667778889999988877553332 256999999999999998765 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 119 ~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~------------------------------------ 162 (279)
T 3fdn_A 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------------------------ 162 (279)
T ss_dssp HHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---------------------------------------
T ss_pred HHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc------------------------------------
Confidence 99999999999999999999999999999999999987532200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......||+.|
T Consensus 163 ---------------------------------------------------------------------~~~~~~~~~~y 173 (279)
T 3fdn_A 163 ---------------------------------------------------------------------RRTDLCGTLDY 173 (279)
T ss_dssp --------------------------------------------------------------------------CCCCTT
T ss_pred ---------------------------------------------------------------------cccccCCCCCc
Confidence 00234678999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa 576 (874)
+|||++.+..++.++|||||||++|+|++|..||... ......+..... .......+.+.+||.+||++||.+|||+
T Consensus 174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~ 252 (279)
T 3fdn_A 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPML 252 (279)
T ss_dssp CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC-CCCTTSCHHHHHHHHHHCCSSGGGSCCH
T ss_pred cCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCC-CCCCcCCHHHHHHHHHHhccChhhCCCH
Confidence 9999999988999999999999999999999988432 222233332211 1112245778999999999999999999
Q ss_pred hHHhhhHHHHhhHh
Q 002843 577 REILQSEVTNEFQE 590 (874)
Q Consensus 577 ~EiL~hp~~~~~~~ 590 (874)
.|+|+||||+....
T Consensus 253 ~e~l~h~~~~~~~~ 266 (279)
T 3fdn_A 253 REVLEHPWITANSS 266 (279)
T ss_dssp HHHHHCHHHHHHCS
T ss_pred HHHhhCccccCCcc
Confidence 99999999997553
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-33 Score=299.06 Aligned_cols=210 Identities=15% Similarity=0.172 Sum_probs=168.4
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+...+....||+++.+......++. .+++||||+|++|.+++...+ .+++.+++.++.|
T Consensus 52 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~q 114 (304)
T 2jam_A 52 SLENEIAVLKKIKHENIVTLEDIYESTTH----------------YYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQ 114 (304)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEEECSSE----------------EEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCeeehhhhcccCCE----------------EEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHH
Confidence 34456667777889999988776543322 257999999999999998765 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEE---ecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKL---LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL---~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
|+.||+|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 115 i~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-------------------------------- 162 (304)
T 2jam_A 115 VLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-------------------------------- 162 (304)
T ss_dssp HHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB--------------------------------
T ss_pred HHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC--------------------------------
Confidence 9999999999999999999999999 67889999999987522100
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
......|
T Consensus 163 -------------------------------------------------------------------------~~~~~~~ 169 (304)
T 2jam_A 163 -------------------------------------------------------------------------IMSTACG 169 (304)
T ss_dssp -------------------------------------------------------------------------TTHHHHS
T ss_pred -------------------------------------------------------------------------ccccccC
Confidence 0023468
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCC---CCCCCCCCHHHHHHHHHccccC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRIL---PPSFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~l---pp~~~~~~p~l~dLi~~cL~~d 569 (874)
|+.|+|||++.+..++.++|||||||++|||++|..||.. .......+..... .+.+....+.+.+||.+||.+|
T Consensus 170 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 249 (304)
T 2jam_A 170 TPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKD 249 (304)
T ss_dssp CCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSS
T ss_pred CCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCC
Confidence 8999999999998999999999999999999999999843 2223344444322 2223445678999999999999
Q ss_pred CCCCCChhHHhhhHHHHhhH
Q 002843 570 PLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 570 P~~RPTa~EiL~hp~~~~~~ 589 (874)
|.+|||+.|+|+||||+...
T Consensus 250 p~~Rps~~~~l~h~~~~~~~ 269 (304)
T 2jam_A 250 PNERYTCEKALSHPWIDGNT 269 (304)
T ss_dssp TTTSCCHHHHHTSHHHHSSC
T ss_pred hhHCcCHHHHhcCccccCCC
Confidence 99999999999999998643
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-33 Score=317.60 Aligned_cols=245 Identities=15% Similarity=0.153 Sum_probs=167.3
Q ss_pred hhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHH
Q 002843 254 SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLY 333 (874)
Q Consensus 254 ~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~ 333 (874)
.+..+...+..++....||+++.+++......... ....+++||||+ ++|.++++... .+++.+++.
T Consensus 67 ~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~-----------~~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~ 133 (432)
T 3n9x_A 67 IDCKRILREITILNRLKSDYIIRLYDLIIPDDLLK-----------FDELYIVLEIAD-SDLKKLFKTPI-FLTEEHIKT 133 (432)
T ss_dssp HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT-----------CCCEEEEEECCS-EEHHHHHHSSC-CCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCc-----------CCeEEEEEecCC-cCHHHHHhccC-CCCHHHHHH
Confidence 34455667778888899999999987755332211 012368999998 59999998765 799999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
|++||+.||+|||++||+||||||+|||++.++.+||+|||+++........... .+..
T Consensus 134 i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~--------------~~~~------- 192 (432)
T 3n9x_A 134 ILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIV--------------NDLE------- 192 (432)
T ss_dssp HHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC----------------------------------
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccccccccccc--------------cccc-------
Confidence 9999999999999999999999999999999999999999999854411000000 0000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
+ ... . ..........++..+
T Consensus 193 -----~-------------------~~~-------~-----------------------------~~~~~~~~~~~~~~~ 212 (432)
T 3n9x_A 193 -----E-------------------NEE-------P-----------------------------GPHNKNLKKQLTSHV 212 (432)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred -----c-------------------ccc-------c-----------------------------cccccchhccccCCC
Confidence 0 000 0 000000001235779
Q ss_pred ccccccCccccc-CCCCCCccchhHHHHHHHHhcCC-----------CCchHHH-------------------HHHHHHh
Q 002843 494 EEKWYASPEELS-GGVCTTSSNIYSLGVLFFELFGR-----------FDSERAL-------------------AAAMSDL 542 (874)
Q Consensus 494 GT~~Y~APEvl~-g~~ys~kSDIwSLGVIL~ELltG-----------~~p~~~~-------------------~~~~~~l 542 (874)
||++|+|||++. +..|+.++||||||||||||++| +++|... ...+..+
T Consensus 213 gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i 292 (432)
T 3n9x_A 213 VTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNII 292 (432)
T ss_dssp CCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHH
T ss_pred CCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHH
Confidence 999999999864 45699999999999999999984 3332110 0000000
Q ss_pred h---c-------------------CCCCC--------CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 543 R---D-------------------RILPP--------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 543 ~---~-------------------~~lpp--------~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
. . ..++. .+...++.+.+||.+||.+||++|||+.|+|+||||+.+.+..
T Consensus 293 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~ 372 (432)
T 3n9x_A 293 FNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKK 372 (432)
T ss_dssp HHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTT
T ss_pred HHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcc
Confidence 0 0 00111 1244568899999999999999999999999999999876554
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-33 Score=321.46 Aligned_cols=210 Identities=16% Similarity=0.165 Sum_probs=170.2
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.++........ .+++||||+||+|.+++...+ .+++.+++.|++|
T Consensus 92 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~----------------~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~q 154 (504)
T 3q5i_A 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKY----------------FYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQ 154 (504)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEEECSSE----------------EEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEEcCCE----------------EEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHH
Confidence 34556677888899999999887653332 256999999999999998765 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCC---cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSN---QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~---~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
|+.||.|||++||+||||||+|||++.++ .+||+|||+++.....
T Consensus 155 i~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-------------------------------- 202 (504)
T 3q5i_A 155 ILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD-------------------------------- 202 (504)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTT--------------------------------
T ss_pred HHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCC--------------------------------
Confidence 99999999999999999999999998776 6999999998633200
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
......+|
T Consensus 203 ------------------------------------------------------------------------~~~~~~~g 210 (504)
T 3q5i_A 203 ------------------------------------------------------------------------YKLRDRLG 210 (504)
T ss_dssp ------------------------------------------------------------------------SCBCCCCS
T ss_pred ------------------------------------------------------------------------CccccccC
Confidence 00134578
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCC---CCCCCCCHHHHHHHHHccccC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILP---PSFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lp---p~~~~~~p~l~dLi~~cL~~d 569 (874)
|+.|+|||++.+ .|+.++|||||||++|+|++|.+||.. ....+..+...... +.+...++.+.+||.+||.+|
T Consensus 211 t~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 289 (504)
T 3q5i_A 211 TAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYD 289 (504)
T ss_dssp CTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSS
T ss_pred CcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCC
Confidence 999999999874 699999999999999999999999843 23334444444332 223456788999999999999
Q ss_pred CCCCCChhHHhhhHHHHhhH
Q 002843 570 PLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 570 P~~RPTa~EiL~hp~~~~~~ 589 (874)
|.+|||+.|+|+||||+...
T Consensus 290 p~~R~t~~e~l~h~~~~~~~ 309 (504)
T 3q5i_A 290 YNKRCTAEEALNSRWIKKYA 309 (504)
T ss_dssp TTTSCCHHHHHTSHHHHHTC
T ss_pred hhHCCCHHHHhcCHhhhhch
Confidence 99999999999999998754
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-33 Score=308.45 Aligned_cols=274 Identities=15% Similarity=0.193 Sum_probs=188.2
Q ss_pred ccCCCccCccccCCCeeE--EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCC-ChhHHHHHHH
Q 002843 186 TENDGLSGNMLSHGSIRT--KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAG 262 (874)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~--~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~ 262 (874)
+-+..+.+.++..++-.+ +.|.+++| |.||++.. .. .+...+.+.+.+.. .........+
T Consensus 13 ~~~~~~~g~~~~~~~~y~~~~~lG~G~~------------g~V~~~~~----~~-~~~~vaiK~~~~~~~~~~~~~~~~E 75 (364)
T 3qyz_A 13 AGPEMVRGQVFDVGPRYTNLSYIGEGAY------------GMVCSAYD----NL-NKVRVAIKKISPFEHQTYCQRTLRE 75 (364)
T ss_dssp --CCBCC-CBCCCTTTEEEEEEEEECSS------------EEEEEEEE----TT-TTEEEEEEEECCTTCHHHHHHHHHH
T ss_pred cceEEEccEeccccccEEEEEEeecCCC------------eEEEEEEE----CC-CCeEEEEEEeccccCcHHHHHHHHH
Confidence 444555666666554433 77887755 66777741 00 11112222222221 2222445567
Q ss_pred HhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Q 002843 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL 342 (874)
..++....||+++.+........... ....+++|||++ ++|.++++.. .+++.+++.|+.||+.||
T Consensus 76 ~~~l~~l~h~niv~~~~~~~~~~~~~-----------~~~~~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL 141 (364)
T 3qyz_A 76 IKILLRFRHENIIGINDIIRAPTIEQ-----------MKDVYIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGL 141 (364)
T ss_dssp HHHHHHCCCTTBCCCCEEECCSSTTT-----------CCCEEEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCccceeEEecCCccc-----------cceEEEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHH
Confidence 77888889999998877654322111 012368999998 5999999876 599999999999999999
Q ss_pred HHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 343 ~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 142 ~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-------------------------------------- 183 (364)
T 3qyz_A 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD-------------------------------------- 183 (364)
T ss_dssp HHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC--------------------------------------
T ss_pred HHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCC--------------------------------------
Confidence 999999999999999999999999999999999874330000
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
........+||++|+|||
T Consensus 184 --------------------------------------------------------------~~~~~~~~~gt~~y~aPE 201 (364)
T 3qyz_A 184 --------------------------------------------------------------HTGFLTEYVATRWYRAPE 201 (364)
T ss_dssp --------------------------------------------------------------BCCTTCCCCSCGGGCCHH
T ss_pred --------------------------------------------------------------ccccccccccccCCCCCH
Confidence 000013558899999999
Q ss_pred cccCC-CCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhh---cC-------------------CCCC--------
Q 002843 503 ELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLR---DR-------------------ILPP-------- 549 (874)
Q Consensus 503 vl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~---~~-------------------~lpp-------- 549 (874)
++.+. .++.++|||||||++|||++|..||.... ..+..+. .. .++.
T Consensus 202 ~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (364)
T 3qyz_A 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 281 (364)
T ss_dssp HHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHH
T ss_pred HhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHH
Confidence 87654 48999999999999999999998873210 0011110 00 0000
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 550 ~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.+....+.+.+||.+||.+||.+|||+.|+|+||||+....
T Consensus 282 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 322 (364)
T 3qyz_A 282 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322 (364)
T ss_dssp HCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred hCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccC
Confidence 12344677899999999999999999999999999997643
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-33 Score=305.58 Aligned_cols=209 Identities=15% Similarity=0.188 Sum_probs=157.4
Q ss_pred HHHHHhHHhhcCC--CCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 259 KAAGAMMVASNAS--PKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 259 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
...+...+....| ++++.++.....+.. .+++|| +.+++|.+++...+ .+++.+++.|+.
T Consensus 54 ~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~----------------~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~ 115 (343)
T 3dbq_A 54 YRNEIAYLNKLQQHSDKIIRLYDYEITDQY----------------IYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWK 115 (343)
T ss_dssp HHHHHHHHHHHTTTCTTBCCEEEEEECSSE----------------EEEEEC-CCSEEHHHHHHHSC-CCCHHHHHHHHH
T ss_pred HHHHHHHHHhhhhcCCceEEEeeeEeeCCE----------------EEEEEe-CCCCCHHHHHHhcC-CCCHHHHHHHHH
Confidence 3445555555555 788888776553332 256999 56789999998876 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++ ++.+||+|||+++.......
T Consensus 116 qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~-------------------------------- 162 (343)
T 3dbq_A 116 NMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-------------------------------- 162 (343)
T ss_dssp HHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------------------------------------
T ss_pred HHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccc--------------------------------
Confidence 999999999999999999999999996 68899999999874330000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......+||+
T Consensus 163 ---------------------------------------------------------------------~~~~~~~~gt~ 173 (343)
T 3dbq_A 163 ---------------------------------------------------------------------SVVKDSQVGTV 173 (343)
T ss_dssp ----------------------------------------------------------------------------CCCC
T ss_pred ---------------------------------------------------------------------cccCCCCcCCc
Confidence 00013457999
Q ss_pred cccCcccccC-----------CCCCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhhcCCCCCCCCCC-CHHHHHH
Q 002843 497 WYASPEELSG-----------GVCTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLRDRILPPSFLSE-NPKEAGF 561 (874)
Q Consensus 497 ~Y~APEvl~g-----------~~ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~~~~lpp~~~~~-~p~l~dL 561 (874)
+|+|||++.+ ..++.++|||||||+||||++|..||... ...+..+........+... .+.+.+|
T Consensus 174 ~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 253 (343)
T 3dbq_A 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDV 253 (343)
T ss_dssp SSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHH
T ss_pred CcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHH
Confidence 9999999865 56899999999999999999999998542 1222333333333333333 3578999
Q ss_pred HHHccccCCCCCCChhHHhhhHHHHh
Q 002843 562 CLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 562 i~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
|.+||+.||.+|||+.|+|+||||+.
T Consensus 254 i~~~L~~dp~~Rpt~~e~l~hp~~~~ 279 (343)
T 3dbq_A 254 LKCCLKRDPKQRISIPELLAHPYVQI 279 (343)
T ss_dssp HHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred HHHHcCCChhHCCCHHHHHhCccccc
Confidence 99999999999999999999999984
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-33 Score=305.95 Aligned_cols=210 Identities=14% Similarity=0.169 Sum_probs=158.3
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......+... +++||||+| +|.+++.... .+++.+++.|+.||
T Consensus 80 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql 141 (329)
T 3gbz_A 80 AIREVSLLKELQHRNIIELKSVIHHNHRL----------------HLIFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQL 141 (329)
T ss_dssp CHHHHHHGGGCCCTTBCCEEEEEEETTEE----------------EEEEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcceEEEEEecCCEE----------------EEEEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHH
Confidence 34566778888999999998876644332 469999995 9999998876 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEe-----cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLL-----QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~-----~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
+.||+|||++||+||||||+|||++ ..+.+||+|||+++......
T Consensus 142 ~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------ 191 (329)
T 3gbz_A 142 INGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI------------------------------ 191 (329)
T ss_dssp HHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC---------------------------------
T ss_pred HHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcc------------------------------
Confidence 9999999999999999999999995 44559999999987433000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
......+
T Consensus 192 -------------------------------------------------------------------------~~~~~~~ 198 (329)
T 3gbz_A 192 -------------------------------------------------------------------------RQFTHEI 198 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------------------------------------cccCCCc
Confidence 0013457
Q ss_pred ccccccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhh-cCCCC--CCC----------------
Q 002843 494 EEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLR-DRILP--PSF---------------- 551 (874)
Q Consensus 494 GT~~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~-~~~lp--p~~---------------- 551 (874)
||+.|+|||++.+.. ++.++|||||||++|||++|..||.... ..+..+. ....+ ..+
T Consensus 199 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (329)
T 3gbz_A 199 ITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKF 278 (329)
T ss_dssp -CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC
T ss_pred CCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhh
Confidence 789999999998754 8999999999999999999998873211 1111111 10111 000
Q ss_pred CC----------CCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 552 LS----------ENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 552 ~~----------~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.. ..+.+.+||.+||++||.+|||+.|+|+||||+...
T Consensus 279 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 326 (329)
T 3gbz_A 279 RGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND 326 (329)
T ss_dssp CCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred ccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence 00 346688999999999999999999999999998653
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-33 Score=301.39 Aligned_cols=214 Identities=16% Similarity=0.179 Sum_probs=161.8
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+.......+.. +++||||+|++|.+++...+ .+++..++.|+.||
T Consensus 49 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l 111 (311)
T 4agu_A 49 ALREIRMLKQLKHPNLVNLLEVFRRKRRL----------------HLVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQT 111 (311)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEEETTEE----------------EEEEECCSEEHHHHHHHTSS-CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCccchhheeecCCeE----------------EEEEEeCCCchHHHHHhhhc-CCCHHHHHHHHHHH
Confidence 44566778888899999988876543332 46999999999999987765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 112 ~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------------------- 156 (311)
T 4agu_A 112 LQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS----------------------------------- 156 (311)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC--------------------------------------
T ss_pred HHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-----------------------------------
Confidence 999999999999999999999999999999999999986432000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......||++|
T Consensus 157 --------------------------------------------------------------------~~~~~~~~~~~y 168 (311)
T 4agu_A 157 --------------------------------------------------------------------DYYDDEVATRWY 168 (311)
T ss_dssp -----------------------------------------------------------------------------GGG
T ss_pred --------------------------------------------------------------------cccCCCcCCccc
Confidence 000244788999
Q ss_pred cCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH-----HHHHHhhcC------------------CCCC-----
Q 002843 499 ASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA-----AAMSDLRDR------------------ILPP----- 549 (874)
Q Consensus 499 ~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~-----~~~~~l~~~------------------~lpp----- 549 (874)
+|||++.+ ..++.++|||||||++|+|++|..||.... ..+...... ..+.
T Consensus 169 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (311)
T 4agu_A 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDME 248 (311)
T ss_dssp CCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCC
T ss_pred cChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccc
Confidence 99999987 568999999999999999999988873211 111111000 0110
Q ss_pred ----CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 550 ----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 550 ----~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
.+...++.+.+||.+||++||.+|||+.|+|+||||+.+++..
T Consensus 249 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~ 295 (311)
T 4agu_A 249 PLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIE 295 (311)
T ss_dssp CHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC---
T ss_pred hhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCHH
Confidence 1134456788999999999999999999999999999877653
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-33 Score=294.97 Aligned_cols=211 Identities=18% Similarity=0.105 Sum_probs=157.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIF 335 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I~ 335 (874)
......++....||+++.+.......+. .+++||||+| +|.+++.. .+..+++.+++.|+
T Consensus 53 ~~~~~~~~~~~~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~ 115 (290)
T 3fme_A 53 LMDLDISMRTVDCPFTVTFYGALFREGD----------------VWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIA 115 (290)
T ss_dssp HHHHHHHHTTCCCTTBCCEEEEEECSSS----------------EEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEEeeeeeccCC----------------EEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHH
Confidence 3344456788899999998887653332 2569999985 99888864 34479999999999
Q ss_pred HHHHHHHHHHHHC-CCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 336 RQIVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 336 ~QIl~aL~yLHs~-gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++.....
T Consensus 116 ~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-------------------------------- 163 (290)
T 3fme_A 116 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD-------------------------------- 163 (290)
T ss_dssp HHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-----------------------------------------
T ss_pred HHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc--------------------------------
Confidence 9999999999998 9999999999999999999999999998643300
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
.......|
T Consensus 164 ------------------------------------------------------------------------~~~~~~~~ 171 (290)
T 3fme_A 164 ------------------------------------------------------------------------VAKDIDAG 171 (290)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------ccccccCC
Confidence 00023468
Q ss_pred cccccCcccc----cCCCCCCccchhHHHHHHHHhcCCCCchHH---HHHHHHH-hhcCCCCCCCCCCCHHHHHHHHHcc
Q 002843 495 EKWYASPEEL----SGGVCTTSSNIYSLGVLFFELFGRFDSERA---LAAAMSD-LRDRILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 495 T~~Y~APEvl----~g~~ys~kSDIwSLGVIL~ELltG~~p~~~---~~~~~~~-l~~~~lpp~~~~~~p~l~dLi~~cL 566 (874)
|+.|+|||++ .+..++.++|||||||++|||++|..||.. ....+.. +............++.+.+|+.+||
T Consensus 172 t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 251 (290)
T 3fme_A 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCL 251 (290)
T ss_dssp CCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHT
T ss_pred CccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHh
Confidence 8999999996 455689999999999999999999988742 2222222 2222222222345678999999999
Q ss_pred ccCCCCCCChhHHhhhHHHHhhHh
Q 002843 567 HPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
++||.+|||+.|+|+||||+....
T Consensus 252 ~~~p~~Rpt~~e~l~hp~f~~~~~ 275 (290)
T 3fme_A 252 KKNSKERPTYPELMQHPFFTLHES 275 (290)
T ss_dssp CSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred hcChhhCcCHHHHHhCcccccCcc
Confidence 999999999999999999997543
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-33 Score=294.71 Aligned_cols=215 Identities=15% Similarity=0.181 Sum_probs=168.9
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
......+..++....||+++.+......... .+++||||+|++|.+++.... .+++.+++.++
T Consensus 52 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~ 114 (283)
T 3bhy_A 52 REEIEREVNILREIRHPNIITLHDIFENKTD----------------VVLILELVSGGELFDFLAEKE-SLTEDEATQFL 114 (283)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEEECSSE----------------EEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCeeehhheecCCCe----------------EEEEEeecCCCcHHHHHHhcC-CCCHHHHHHHH
Confidence 3445556677778889999988876553322 257999999999999998765 79999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCC----cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSN----QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~----~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~ 411 (874)
.||+.||.|||++||+||||||+||+++.++ .+||+|||+++.....
T Consensus 115 ~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~----------------------------- 165 (283)
T 3bhy_A 115 KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG----------------------------- 165 (283)
T ss_dssp HHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-------------------------------
T ss_pred HHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCC-----------------------------
Confidence 9999999999999999999999999998877 8999999988633200
Q ss_pred hhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccc
Q 002843 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (874)
Q Consensus 412 ~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~ 491 (874)
.....
T Consensus 166 ---------------------------------------------------------------------------~~~~~ 170 (283)
T 3bhy_A 166 ---------------------------------------------------------------------------NEFKN 170 (283)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------------------------------------------------Ccccc
Confidence 00023
Q ss_pred ccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCC--C-CCCCCCCHHHHHHHHHcc
Q 002843 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRIL--P-PSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 492 ~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~l--p-p~~~~~~p~l~dLi~~cL 566 (874)
..||+.|+|||++.+..++.++|||||||++|+|++|..||.. ....+..+..... + +.+....+.+.+|+.+||
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 250 (283)
T 3bhy_A 171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLL 250 (283)
T ss_dssp -CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTS
T ss_pred cCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHc
Confidence 4688999999999998999999999999999999999998742 2222333332221 1 112345577899999999
Q ss_pred ccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 567 HPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
.+||.+||++.|+|+||||+.++..
T Consensus 251 ~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 251 VKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp CSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred cCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 9999999999999999999987654
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-33 Score=313.46 Aligned_cols=217 Identities=16% Similarity=0.145 Sum_probs=156.4
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC--------CCCCCHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR--------GHKGKRI 329 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~--------~~~lse~ 329 (874)
....+..++....||+++.+........... .+++||||+ ++|.+++... ...+++.
T Consensus 64 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~--------------~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~ 128 (405)
T 3rgf_A 64 SACREIALLRELKHPNVISLQKVFLSHADRK--------------VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRG 128 (405)
T ss_dssp HHHHHHHHHHHCCCTTBCCCCEEEEETTTTE--------------EEEEEECCS-EEHHHHHHHHHHHC-------CCHH
T ss_pred HHHHHHHHHHhcCCCCeeeEeeEEecCCCCe--------------EEEEEeCCC-CCHHHHHHHhccccccccccCCCHH
Confidence 3445667788888999999887765322211 267999998 5899988632 1149999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCCCCceEE----ecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhc
Q 002843 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL----LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMF 405 (874)
Q Consensus 330 e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL----~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~df 405 (874)
+++.|++||+.||+|||++||+||||||+|||| +.++.+||+|||+++.......
T Consensus 129 ~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~--------------------- 187 (405)
T 3rgf_A 129 MVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK--------------------- 187 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCc---------------------
Confidence 999999999999999999999999999999999 6678999999999874330000
Q ss_pred cccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccc
Q 002843 406 TTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQ 485 (874)
Q Consensus 406 g~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~ 485 (874)
.
T Consensus 188 -------------------------------------------------------------------------------~ 188 (405)
T 3rgf_A 188 -------------------------------------------------------------------------------P 188 (405)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred ccccccccccccccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHH-----------HHHHHh---hcCCCCCC
Q 002843 486 STSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALA-----------AAMSDL---RDRILPPS 550 (874)
Q Consensus 486 ~~~~t~~~GT~~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~-----------~~~~~l---~~~~lpp~ 550 (874)
.......+||++|+|||++.+. .|+.++||||||||||||++|.+||.... ..+..+ ........
T Consensus 189 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~ 268 (405)
T 3rgf_A 189 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKD 268 (405)
T ss_dssp --------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTT
T ss_pred cccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhh
Confidence 0011356889999999999884 48999999999999999999999883110 011111 11110000
Q ss_pred ----------------------------------CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 551 ----------------------------------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 551 ----------------------------------~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.....+.+.+||.+||.+||.+|||+.|+|+||||.+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 269 WEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp CGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred cchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence 111245678999999999999999999999999998643
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-33 Score=305.84 Aligned_cols=208 Identities=16% Similarity=0.121 Sum_probs=162.1
Q ss_pred HHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC-------------
Q 002843 259 KAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH------------- 324 (874)
Q Consensus 259 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~------------- 324 (874)
...+...+... .||+++.++.....++.. .+++||||+||+|.++|.....
T Consensus 72 ~~~E~~~l~~l~~hpniv~~~~~~~~~~~~---------------~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~ 136 (359)
T 3vhe_A 72 LMSELKILIHIGHHLNVVNLLGACTKPGGP---------------LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFR 136 (359)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEECSTTSC---------------CEEEEECCTTEEHHHHHHTTTTSBCSCC-------
T ss_pred HHHHHHHHHhhcCCcceeeeeeeeecCCCc---------------eEEEEEecCCCcHHHHHHhccccccccccccchhh
Confidence 44444445555 789999998875533321 2579999999999999976532
Q ss_pred ----------------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002843 325 ----------------------------------------------------KGKRIECLYIFRQIVALVDYHHTQGVTF 352 (874)
Q Consensus 325 ----------------------------------------------------~lse~e~~~I~~QIl~aL~yLHs~gIIH 352 (874)
.+++.+++.|+.||+.||+|||++||+|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH 216 (359)
T 3vhe_A 137 QGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 216 (359)
T ss_dssp -----------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 2899999999999999999999999999
Q ss_pred cCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCC
Q 002843 353 LDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPS 432 (874)
Q Consensus 353 RDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~ 432 (874)
|||||+|||++.++.+||+|||+++.+.....
T Consensus 217 ~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------------ 248 (359)
T 3vhe_A 217 RDLAARNILLSEKNVVKICDFGLARDIYKDPD------------------------------------------------ 248 (359)
T ss_dssp SCCSGGGEEECGGGCEEECCCGGGSCTTSCTT------------------------------------------------
T ss_pred CCCChhhEEEcCCCcEEEEeccceeeeccccc------------------------------------------------
Confidence 99999999999999999999999874330000
Q ss_pred ccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCc
Q 002843 433 KYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTS 512 (874)
Q Consensus 433 ~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~k 512 (874)
........||+.|+|||++.+..++.+
T Consensus 249 -----------------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~ 275 (359)
T 3vhe_A 249 -----------------------------------------------------YVRKGDARLPLKWMAPETIFDRVYTIQ 275 (359)
T ss_dssp -----------------------------------------------------CEEC--CEECGGGCCHHHHHHCCCCHH
T ss_pred -----------------------------------------------------chhccccCCCceeEChhhhcCCCCCch
Confidence 000134567899999999999899999
Q ss_pred cchhHHHHHHHHhcC-CCCchHH---HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 513 SNIYSLGVLFFELFG-RFDSERA---LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 513 SDIwSLGVIL~ELlt-G~~p~~~---~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+|||||||++|||++ |..||.. .......+.....++......+.+.+|+.+||++||.+|||+.|+++|
T Consensus 276 ~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 276 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp HHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 999999999999998 9888843 222334444444444444456789999999999999999999999887
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=303.93 Aligned_cols=223 Identities=14% Similarity=0.118 Sum_probs=165.8
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.++.......... ..+....+++||||+| +|.+++......+++.+++.|+.|
T Consensus 62 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--------~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~q 132 (351)
T 3mi9_A 62 TALREIKILQLLKHENVVNLIEICRTKASPY--------NRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQM 132 (351)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEEEEC----------------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcccHhheeecccccc--------ccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHH
Confidence 3455667778888999999888765433211 0111224689999985 888888776557999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 133 i~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~--------------------------------- 179 (351)
T 3mi9_A 133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN--------------------------------- 179 (351)
T ss_dssp HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSS---------------------------------
T ss_pred HHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccccccccc---------------------------------
Confidence 99999999999999999999999999999999999999874330000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
..........||++
T Consensus 180 ------------------------------------------------------------------~~~~~~~~~~gt~~ 193 (351)
T 3mi9_A 180 ------------------------------------------------------------------SQPNRYTNRVVTLW 193 (351)
T ss_dssp ------------------------------------------------------------------SSCCCCCSSCSCGG
T ss_pred ------------------------------------------------------------------ccccccCCcccccC
Confidence 00001135678999
Q ss_pred ccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHH-----HHHHHHHhhcCCCCCCCCC------------------
Q 002843 498 YASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERA-----LAAAMSDLRDRILPPSFLS------------------ 553 (874)
Q Consensus 498 Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~-----~~~~~~~l~~~~lpp~~~~------------------ 553 (874)
|+|||++.+. .++.++|||||||++|||++|.+||.. ....+..+.....+..+..
T Consensus 194 y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (351)
T 3mi9_A 194 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKR 273 (351)
T ss_dssp GCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCC
T ss_pred ccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhccccccccccc
Confidence 9999999874 589999999999999999999988732 1112222222222222211
Q ss_pred ----------CCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 554 ----------ENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 554 ----------~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
..+.+.+||.+||.+||++|||+.|+|+||||...
T Consensus 274 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 318 (351)
T 3mi9_A 274 KVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 318 (351)
T ss_dssp CHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred CHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence 14568899999999999999999999999999753
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-33 Score=309.13 Aligned_cols=214 Identities=13% Similarity=0.072 Sum_probs=168.6
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC------CCCCHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------HKGKRIE 330 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~------~~lse~e 330 (874)
.....+..++....||+++.++.....+.. .+++||||+||+|.+++.... ..+++.+
T Consensus 119 ~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~ 182 (367)
T 3l9p_A 119 LDFLMEALIISKFNHQNIVRCIGVSLQSLP----------------RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 182 (367)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEECSSSS----------------CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHH
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEecCCC----------------CEEEEEeCCCCCHHHHHHhhccccCccccccHHH
Confidence 345566677888899999998887553322 256999999999999997643 2599999
Q ss_pred HHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCC---cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccc
Q 002843 331 CLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN---QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTT 407 (874)
Q Consensus 331 ~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~---~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~ 407 (874)
++.|+.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.......
T Consensus 183 ~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~----------------------- 239 (367)
T 3l9p_A 183 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY----------------------- 239 (367)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSS-----------------------
T ss_pred HHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccc-----------------------
Confidence 999999999999999999999999999999999555 599999999975431000
Q ss_pred cchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccc
Q 002843 408 GIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQST 487 (874)
Q Consensus 408 ~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~ 487 (874)
..
T Consensus 240 ------------------------------------------------------------------------------~~ 241 (367)
T 3l9p_A 240 ------------------------------------------------------------------------------YR 241 (367)
T ss_dssp ------------------------------------------------------------------------------CT
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred ccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHH
Q 002843 488 SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLW 564 (874)
Q Consensus 488 ~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~ 564 (874)
......||+.|+|||++.+..++.++|||||||+||||++ |..||.. .......+.....++......+.+.+|+.+
T Consensus 242 ~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~ 321 (367)
T 3l9p_A 242 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQ 321 (367)
T ss_dssp TCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred cCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHH
Confidence 0024567899999999998899999999999999999998 8888843 223344444444443344556789999999
Q ss_pred ccccCCCCCCChhHHhhhHHHHh
Q 002843 565 QLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 565 cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
||+.||.+||++.+|+++.++..
T Consensus 322 ~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 322 CWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HcCCCHhHCcCHHHHHHHHHHHh
Confidence 99999999999999999976653
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=316.06 Aligned_cols=179 Identities=14% Similarity=0.040 Sum_probs=143.5
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCH-------HHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEecccc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKR-------IECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse-------~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGl 375 (874)
.+++|||| +|+|.++|...+ .+++ ..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 175 ~~lv~E~~-~g~L~~~l~~~~-~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~ 252 (377)
T 3byv_A 175 RFFLYPRM-QSNLQTFGEVLL-SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEH 252 (377)
T ss_dssp EEEEEECC-SEEHHHHHHHHH-HTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGG
T ss_pred EEEEEecc-CCCHHHHHHhcc-ccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechh
Confidence 46899999 579999998653 3444 88889999999999999999999999999999999999999999999
Q ss_pred chhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCC
Q 002843 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (874)
Q Consensus 376 ar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d 455 (874)
++....
T Consensus 253 a~~~~~-------------------------------------------------------------------------- 258 (377)
T 3byv_A 253 LVRDGA-------------------------------------------------------------------------- 258 (377)
T ss_dssp CEETTC--------------------------------------------------------------------------
T ss_pred heecCC--------------------------------------------------------------------------
Confidence 863220
Q ss_pred CCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC-----------CCCCccchhHHHHHHHH
Q 002843 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-----------VCTTSSNIYSLGVLFFE 524 (874)
Q Consensus 456 ~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~-----------~ys~kSDIwSLGVIL~E 524 (874)
.....+| +.|+|||++.+. .|+.++|||||||+|||
T Consensus 259 --------------------------------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 259 --------------------------------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp --------------------------------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred --------------------------------cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 0023466 899999999987 79999999999999999
Q ss_pred hcCCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhhh
Q 002843 525 LFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA 593 (874)
Q Consensus 525 LltG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~~ 593 (874)
|++|..||...... ..... .........+.+.+||.+||..||.+|||+.|+|+||||+.++....
T Consensus 306 lltg~~Pf~~~~~~--~~~~~-~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~~ 371 (377)
T 3byv_A 306 IWCADLPITKDAAL--GGSEW-IFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELS 371 (377)
T ss_dssp HHHSSCCC--------CCSGG-GGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHHHHH
T ss_pred HHHCCCCCcccccc--cchhh-hhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHHHHH
Confidence 99999999654321 11111 11122445678999999999999999999999999999999876543
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-33 Score=309.98 Aligned_cols=206 Identities=15% Similarity=0.172 Sum_probs=164.4
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.++......+.. +++|||| +|+|.+++...+ .+++.+++.|+.||
T Consensus 56 ~~~E~~~l~~l~hpnIv~l~~~~~~~~~~----------------~lv~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi 117 (336)
T 3h4j_B 56 VEREISYLKLLRHPHIIKLYDVITTPTDI----------------VMVIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQI 117 (336)
T ss_dssp HHHHHHHHTTCCCTTBCCEEEEEECSSEE----------------EEEECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCeEEEEEEeCCEE----------------EEEEECC-CCcHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 44566678888999999998876543332 5699999 689999998766 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 118 ~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~------------------------------------ 161 (336)
T 3h4j_B 118 ICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG------------------------------------ 161 (336)
T ss_dssp HHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS------------------------------------
T ss_pred HHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC------------------------------------
Confidence 99999999999999999999999999999999999998632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......+||+.|
T Consensus 162 --------------------------------------------------------------------~~~~~~~gt~~y 173 (336)
T 3h4j_B 162 --------------------------------------------------------------------NFLKTSCGSPNY 173 (336)
T ss_dssp --------------------------------------------------------------------BTTCCCTTSTTT
T ss_pred --------------------------------------------------------------------cccccccCCcCc
Confidence 000245789999
Q ss_pred cCcccccCCCC-CCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCC---CCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 499 ASPEELSGGVC-TTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRIL---PPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 499 ~APEvl~g~~y-s~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~l---pp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
+|||++.+..+ +.++|||||||++|+|++|..||.... ...+...+. .......++.+.+||.+||.+||.+||
T Consensus 174 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~--~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rp 251 (336)
T 3h4j_B 174 AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF--IPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRI 251 (336)
T ss_dssp SCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSS--STTCBCCCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred CCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHcCCCCCcccCCHHHHHHHHHHcCCChhHCc
Confidence 99999998776 789999999999999999999985421 111111111 111122457789999999999999999
Q ss_pred ChhHHhhhHHHHhh
Q 002843 575 TTREILQSEVTNEF 588 (874)
Q Consensus 575 Ta~EiL~hp~~~~~ 588 (874)
|+.|+++||||+..
T Consensus 252 t~~eil~hp~~~~~ 265 (336)
T 3h4j_B 252 TIQEIRRDPWFNVN 265 (336)
T ss_dssp CHHHHTTCHHHHTT
T ss_pred CHHHHHhChhhccC
Confidence 99999999999853
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=302.09 Aligned_cols=220 Identities=19% Similarity=0.252 Sum_probs=167.8
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.+++......... .-.+++||||+|++|.+++...+ .+++.+++.|+.|
T Consensus 58 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~------------~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~q 124 (311)
T 3ork_A 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAG------------PLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIAD 124 (311)
T ss_dssp HHHHHHTTCCCCCCTTBCCEEEEEEEEETTE------------EEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcceEEEeeeccCCCC------------cccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHH
Confidence 4456667788889999999887755333210 00157999999999999998766 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 125 i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~--------------------------------- 171 (311)
T 3ork_A 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN--------------------------------- 171 (311)
T ss_dssp HHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-----------------------------------------
T ss_pred HHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccccccccc---------------------------------
Confidence 99999999999999999999999999999999999999874331000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
........+||+.
T Consensus 172 -------------------------------------------------------------------~~~~~~~~~gt~~ 184 (311)
T 3ork_A 172 -------------------------------------------------------------------SVTQTAAVIGTAQ 184 (311)
T ss_dssp -----------------------------------------------------------------------------CCT
T ss_pred -------------------------------------------------------------------ccccccccCcCcc
Confidence 0000134578999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH---HHHHHHHhhcCCCCCC--CCCCCHHHHHHHHHccccCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA---LAAAMSDLRDRILPPS--FLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~---~~~~~~~l~~~~lpp~--~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
|+|||++.+..++.++|||||||++|||++|..||.. .......+.....++. .....+.+.+||.+||+.||.+
T Consensus 185 y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~ 264 (311)
T 3ork_A 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPEN 264 (311)
T ss_dssp TCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGG
T ss_pred cCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhh
Confidence 9999999999999999999999999999999999842 2222333444433332 2345678999999999999999
Q ss_pred CCChhHHhhhHHHHhhHh
Q 002843 573 RPTTREILQSEVTNEFQE 590 (874)
Q Consensus 573 RPTa~EiL~hp~~~~~~~ 590 (874)
||++.++|.|+|++....
T Consensus 265 R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 265 RYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp SCSSHHHHHHHHHHHHTT
T ss_pred ChhhHHHHHHHHHHHhcC
Confidence 999999999999986543
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-33 Score=300.64 Aligned_cols=229 Identities=12% Similarity=0.177 Sum_probs=169.8
Q ss_pred hhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHH
Q 002843 254 SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLY 333 (874)
Q Consensus 254 ~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~ 333 (874)
........+..++....||+++.++.....++.. +++||||+|++|.+++......+++.+++.
T Consensus 49 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 112 (310)
T 3s95_A 49 ETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRL----------------NFITEYIKGGTLRGIIKSMDSQYPWSQRVS 112 (310)
T ss_dssp HHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE----------------EEEEECCTTCBHHHHHHHCCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcCcccEEEEEecCCee----------------EEEEEecCCCcHHHHHHhccCCCCHHHHHH
Confidence 3444566677788888999999998876644332 469999999999999998666899999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++......... .
T Consensus 113 i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~------------------~-------- 166 (310)
T 3s95_A 113 FAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP------------------E-------- 166 (310)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------------------------------
T ss_pred HHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc------------------c--------
Confidence 99999999999999999999999999999999999999999987544110000 0
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
+.. .. ...........+
T Consensus 167 ---------------------~~~--~~----------------------------------------~~~~~~~~~~~~ 183 (310)
T 3s95_A 167 ---------------------GLR--SL----------------------------------------KKPDRKKRYTVV 183 (310)
T ss_dssp ----------------------------------------------------------------------------CCCC
T ss_pred ---------------------ccc--cc----------------------------------------cccccccccccC
Confidence 000 00 000000113568
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH-------HHHHhhcCCCCCCCCCCCHHHHHHHHHcc
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA-------AMSDLRDRILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~-------~~~~l~~~~lpp~~~~~~p~l~dLi~~cL 566 (874)
||+.|+|||++.+..++.++|||||||++|||++|..|+..... ..........++ ...+.+.+|+.+||
T Consensus 184 gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l 260 (310)
T 3s95_A 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPP---NCPPSFFPITVRCC 260 (310)
T ss_dssp SCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCT---TCCTTHHHHHHHHT
T ss_pred CCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCCC---CCCHHHHHHHHHHc
Confidence 99999999999999999999999999999999999877642110 011111112222 23456889999999
Q ss_pred ccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 567 HPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
+.||++|||+.++++ +++.++...
T Consensus 261 ~~dP~~Rps~~~l~~--~L~~l~~~~ 284 (310)
T 3s95_A 261 DLDPEKRPSFVKLEH--WLETLRMHL 284 (310)
T ss_dssp CSSGGGSCCHHHHHH--HHHHHHHHH
T ss_pred cCChhhCcCHHHHHH--HHHHHHHhc
Confidence 999999999999976 677666544
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=295.56 Aligned_cols=212 Identities=16% Similarity=0.137 Sum_probs=169.0
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++.....+.. .+++||||+|++|.+++... .+++.+++.++.
T Consensus 65 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ 126 (303)
T 3a7i_A 65 EDIQQEITVLSQCDSPYVTKYYGSYLKDTK----------------LWIIMEYLGGGSALDLLEPG--PLDETQIATILR 126 (303)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEEEETTE----------------EEEEEECCTTEEHHHHHTTS--CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEeEEEEEEecCCe----------------EEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHH
Confidence 344555667778899999988877654333 25699999999999999764 699999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 127 qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------------------------- 173 (303)
T 3a7i_A 127 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--------------------------------- 173 (303)
T ss_dssp HHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB---------------------------------
T ss_pred HHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc---------------------------------
Confidence 99999999999999999999999999999999999999886433000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......||+
T Consensus 174 ----------------------------------------------------------------------~~~~~~~~~~ 183 (303)
T 3a7i_A 174 ----------------------------------------------------------------------IKRNTFVGTP 183 (303)
T ss_dssp ----------------------------------------------------------------------CCBCCCCSCG
T ss_pred ----------------------------------------------------------------------cccCccCCCc
Confidence 0002446889
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
.|+|||++.+..++.++|||||||++|||++|..||.... .....+.....+.......+.+.+||.+||++||.+||
T Consensus 184 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 263 (303)
T 3a7i_A 184 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP 263 (303)
T ss_dssp GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSC
T ss_pred CccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCc
Confidence 9999999999899999999999999999999999884321 12222333333333334457799999999999999999
Q ss_pred ChhHHhhhHHHHhhH
Q 002843 575 TTREILQSEVTNEFQ 589 (874)
Q Consensus 575 Ta~EiL~hp~~~~~~ 589 (874)
|+.|+|+||||....
T Consensus 264 s~~~ll~~~~~~~~~ 278 (303)
T 3a7i_A 264 TAKELLKHKFILRNA 278 (303)
T ss_dssp CHHHHTTCHHHHHHC
T ss_pred CHHHHhhChhhhcCC
Confidence 999999999997643
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-33 Score=309.40 Aligned_cols=205 Identities=15% Similarity=0.146 Sum_probs=162.2
Q ss_pred HHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 261 AGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 261 ~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
.+..++... .||+++.+.......+. .+++||||+|++|.+++.... .+++..++.|+.||+
T Consensus 148 ~E~~~l~~l~~hp~iv~~~~~~~~~~~----------------~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~ 210 (365)
T 2y7j_A 148 RETHILRQVAGHPHIITLIDSYESSSF----------------MFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLL 210 (365)
T ss_dssp HHHHHHHHHTTCTTBCCEEEEEEBSSE----------------EEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEeEEEEEEeeCCE----------------EEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHH
Confidence 344445554 79999988776553332 256999999999999998765 799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||++||+||||||+|||++.++.+||+|||++..+...
T Consensus 211 ~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~------------------------------------- 253 (365)
T 2y7j_A 211 EAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG------------------------------------- 253 (365)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT-------------------------------------
T ss_pred HHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCC-------------------------------------
Confidence 9999999999999999999999999999999999987633200
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.......||+.|+
T Consensus 254 -------------------------------------------------------------------~~~~~~~gt~~y~ 266 (365)
T 2y7j_A 254 -------------------------------------------------------------------EKLRELCGTPGYL 266 (365)
T ss_dssp -------------------------------------------------------------------CCBCCCCSCGGGC
T ss_pred -------------------------------------------------------------------cccccCCCCCCcc
Confidence 0012457899999
Q ss_pred CcccccC------CCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCC---CCCCCCCHHHHHHHHHcccc
Q 002843 500 SPEELSG------GVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILP---PSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 500 APEvl~g------~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lp---p~~~~~~p~l~dLi~~cL~~ 568 (874)
|||++.+ ..++.++|||||||++|||++|..||.. ....+..+...... +.+....+.+.+||.+||+.
T Consensus 267 aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 346 (365)
T 2y7j_A 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQV 346 (365)
T ss_dssp CHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCS
T ss_pred ChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCC
Confidence 9999864 3588999999999999999999999832 12223333333222 22345567799999999999
Q ss_pred CCCCCCChhHHhhhHHHH
Q 002843 569 EPLSRPTTREILQSEVTN 586 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~ 586 (874)
||++|||+.|+|+||||+
T Consensus 347 dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 347 DPEARLTAEQALQHPFFE 364 (365)
T ss_dssp STTTSCCHHHHHHSGGGC
T ss_pred ChhHCcCHHHHhcCcccC
Confidence 999999999999999996
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-33 Score=304.82 Aligned_cols=206 Identities=16% Similarity=0.198 Sum_probs=161.2
Q ss_pred HHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHH
Q 002843 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVD 343 (874)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL~ 343 (874)
+.....||+++.++........ .+++||||+|++|.+++... ...+++.+++.|+.||+.||+
T Consensus 82 l~~l~~~~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~ 145 (327)
T 3lm5_A 82 LELAKSCPRVINLHEVYENTSE----------------IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVY 145 (327)
T ss_dssp HHHTTTCTTBCCEEEEEECSSE----------------EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHH
T ss_pred HHhccCCCCEEEEEEEEEeCCe----------------EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 3334456898888877553333 25699999999999999653 337999999999999999999
Q ss_pred HHHHCCCcccCCCCCceEEec---CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 344 YHHTQGVTFLDLKPSSFKLLQ---SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 344 yLHs~gIIHRDLKPsNILL~~---~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
|||++||+||||||+|||++. ++.+||+|||+++.....
T Consensus 146 ~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~-------------------------------------- 187 (327)
T 3lm5_A 146 YLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA-------------------------------------- 187 (327)
T ss_dssp HHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-----------------------------------------
T ss_pred HHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc--------------------------------------
Confidence 999999999999999999997 789999999998743200
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
.......||+.|+|
T Consensus 188 ------------------------------------------------------------------~~~~~~~gt~~y~a 201 (327)
T 3lm5_A 188 ------------------------------------------------------------------CELREIMGTPEYLA 201 (327)
T ss_dssp ------------------------------------------------------------------------CCCGGGCC
T ss_pred ------------------------------------------------------------------cccccccCCcCccC
Confidence 00024578999999
Q ss_pred cccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhh---cCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 501 PEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLR---DRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 501 PEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~---~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
||++.+..++.++|||||||++|||++|..||.. .......+. ....++.+....+.+.+||.+||.+||.+|||
T Consensus 202 PE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 281 (327)
T 3lm5_A 202 PEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPT 281 (327)
T ss_dssp HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred CeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcC
Confidence 9999999999999999999999999999998832 112222222 23334444566688999999999999999999
Q ss_pred hhHHhhhHHHHhhHh
Q 002843 576 TREILQSEVTNEFQE 590 (874)
Q Consensus 576 a~EiL~hp~~~~~~~ 590 (874)
+.|+|+||||+....
T Consensus 282 ~~~ll~h~~~~~~~~ 296 (327)
T 3lm5_A 282 AEICLSHSWLQQWDF 296 (327)
T ss_dssp HHHHTTCGGGCCCCT
T ss_pred HHHHhCCHhhccccc
Confidence 999999999987543
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-33 Score=308.73 Aligned_cols=193 Identities=17% Similarity=0.164 Sum_probs=150.0
Q ss_pred CCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002843 271 SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQG 349 (874)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~aL~yLHs~g 349 (874)
||+++.++........ .+++|||| |++|.+++.... ..+++.+++.|+.||+.||+|||++|
T Consensus 95 h~~iv~~~~~~~~~~~----------------~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 157 (360)
T 3llt_A 95 NNNIVKYHGKFMYYDH----------------MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS 157 (360)
T ss_dssp GGGBCCEEEEEEETTE----------------EEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCeecccceeeECCe----------------eEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 8888888776654332 25799999 899999998753 35999999999999999999999999
Q ss_pred CcccCCCCCceEEec-------------------------CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhh
Q 002843 350 VTFLDLKPSSFKLLQ-------------------------SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEM 404 (874)
Q Consensus 350 IIHRDLKPsNILL~~-------------------------~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~d 404 (874)
|+||||||+|||++. ++.+||+|||+++....
T Consensus 158 ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~----------------------- 214 (360)
T 3llt_A 158 LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD----------------------- 214 (360)
T ss_dssp EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS-----------------------
T ss_pred eeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCC-----------------------
Confidence 999999999999975 77899999998753210
Q ss_pred ccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccc
Q 002843 405 FTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQ 484 (874)
Q Consensus 405 fg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~ 484 (874)
T Consensus 215 -------------------------------------------------------------------------------- 214 (360)
T 3llt_A 215 -------------------------------------------------------------------------------- 214 (360)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc--CCCC------------
Q 002843 485 QSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD--RILP------------ 548 (874)
Q Consensus 485 ~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~--~~lp------------ 548 (874)
......||+.|+|||++.+..|+.++|||||||+||||++|..||... ...+..+.. ..+|
T Consensus 215 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 291 (360)
T 3llt_A 215 ---YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNG 291 (360)
T ss_dssp ---CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGG
T ss_pred ---CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccC
Confidence 002457899999999999999999999999999999999999887321 111111111 0000
Q ss_pred --------------CCC-----------------CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHH
Q 002843 549 --------------PSF-----------------LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (874)
Q Consensus 549 --------------p~~-----------------~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~ 586 (874)
... ....+.+.+||.+||++||.+|||+.|+|+||||+
T Consensus 292 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 292 SKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp GGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred ccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 000 01125567999999999999999999999999985
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=296.90 Aligned_cols=215 Identities=15% Similarity=0.120 Sum_probs=169.4
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++.....++. .+++||||+|++|.+++......+++.+++.++.
T Consensus 69 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~ 132 (314)
T 3com_A 69 QEIIKEISIMQQCDSPHVVKYYGSYFKNTD----------------LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQ 132 (314)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEEEETTE----------------EEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCccEEEEEEeCCE----------------EEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHH
Confidence 344556667778899999988877654332 2569999999999999986555899999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 133 ~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--------------------------------- 179 (314)
T 3com_A 133 STLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM--------------------------------- 179 (314)
T ss_dssp HHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB---------------------------------
T ss_pred HHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc---------------------------------
Confidence 99999999999999999999999999999999999999886432000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......||+
T Consensus 180 ----------------------------------------------------------------------~~~~~~~~~~ 189 (314)
T 3com_A 180 ----------------------------------------------------------------------AKRNTVIGTP 189 (314)
T ss_dssp ----------------------------------------------------------------------SCBCCCCSCG
T ss_pred ----------------------------------------------------------------------cccCccCCCC
Confidence 0002346889
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHhhcCCCCCCC---CCCCHHHHHHHHHccccCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDLRDRILPPSF---LSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l~~~~lpp~~---~~~~p~l~dLi~~cL~~dP~ 571 (874)
.|+|||++.+..++.++|||||||++|+|++|..||..... ....+.... ++.+ ....+.+.+||.+||..||.
T Consensus 190 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~ 268 (314)
T 3com_A 190 FWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNP-PPTFRKPELWSDNFTDFVKQCLVKSPE 268 (314)
T ss_dssp GGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-CCCCSSGGGSCHHHHHHHHHHTCSCTT
T ss_pred CccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC-CcccCCcccCCHHHHHHHHHHccCChh
Confidence 99999999998899999999999999999999999853221 111222221 1221 12346789999999999999
Q ss_pred CCCChhHHhhhHHHHhhHhh
Q 002843 572 SRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~~~~~~ 591 (874)
+|||+.++|+||||+.....
T Consensus 269 ~Rpt~~~ll~~~~~~~~~~~ 288 (314)
T 3com_A 269 QRATATQLLQHPFVRSAKGV 288 (314)
T ss_dssp TSCCHHHHTTSHHHHTCCCG
T ss_pred hCcCHHHHHhCHHHhcCCcc
Confidence 99999999999999976543
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=309.64 Aligned_cols=210 Identities=16% Similarity=0.202 Sum_probs=159.8
Q ss_pred HHHHHhHHhhcC--CCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 259 KAAGAMMVASNA--SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 259 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
...+..++.... ||+++.++.....+... +++|| |.+++|.++|.... .+++.+++.|+.
T Consensus 101 ~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~----------------~lv~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~ 162 (390)
T 2zmd_A 101 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYI----------------YMVME-CGNIDLNSWLKKKK-SIDPWERKSYWK 162 (390)
T ss_dssp HHHHHHHHHHHTTTCTTBCCEEEEEECSSEE----------------EEEEE-CCSEEHHHHHHHCS-SCCHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCeEEEEEEEEecCCEE----------------EEEEe-cCCCCHHHHHHhcC-CCCHHHHHHHHH
Confidence 344555555554 58888888765544332 56999 67899999998876 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++ ++.+||+|||+++.+.....
T Consensus 163 qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~-------------------------------- 209 (390)
T 2zmd_A 163 NMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-------------------------------- 209 (390)
T ss_dssp HHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-------------------------------------
T ss_pred HHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc--------------------------------
Confidence 999999999999999999999999995 68999999999874330000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......+||+
T Consensus 210 ---------------------------------------------------------------------~~~~~~~~gt~ 220 (390)
T 2zmd_A 210 ---------------------------------------------------------------------SVVKDSQVGAV 220 (390)
T ss_dssp -------------------------------------------------------------------------CCSCCCG
T ss_pred ---------------------------------------------------------------------cccCCCCCcCC
Confidence 00013457999
Q ss_pred cccCcccccC-----------CCCCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhhcCCCCCCCCC-CCHHHHHH
Q 002843 497 WYASPEELSG-----------GVCTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLRDRILPPSFLS-ENPKEAGF 561 (874)
Q Consensus 497 ~Y~APEvl~g-----------~~ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~~~~lpp~~~~-~~p~l~dL 561 (874)
.|+|||++.+ ..|+.++||||||||||||++|..||... ...+..+........+.. ..+.+.+|
T Consensus 221 ~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 300 (390)
T 2zmd_A 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDV 300 (390)
T ss_dssp GGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHH
T ss_pred CccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHH
Confidence 9999999975 36899999999999999999999998532 222333333333323322 24678999
Q ss_pred HHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 562 CLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 562 i~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
|.+||..||.+|||+.|+|+||||...
T Consensus 301 i~~~L~~dP~~Rps~~ell~hp~~~~~ 327 (390)
T 2zmd_A 301 LKCCLKRDPKQRISIPELLAHPYVQIQ 327 (390)
T ss_dssp HHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred HHHHcccChhhCCCHHHHhhCcCcccc
Confidence 999999999999999999999999853
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=303.05 Aligned_cols=207 Identities=14% Similarity=0.097 Sum_probs=164.9
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.+......+.. .+++||||. |+|.+++......+++.+++.|+.|
T Consensus 100 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~----------------~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~q 162 (348)
T 1u5q_A 100 DIIKEVRFLQKLRHPNTIQYRGCYLREHT----------------AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHG 162 (348)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEEEETTE----------------EEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEECCe----------------EEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHH
Confidence 34566677888899999998877654332 256999998 6899998765558999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 163 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~------------------------------------ 206 (348)
T 1u5q_A 163 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------------------------------------ 206 (348)
T ss_dssp HHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS------------------------------------
T ss_pred HHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC------------------------------------
Confidence 99999999999999999999999999999999999998753210
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.....||+.
T Consensus 207 -----------------------------------------------------------------------~~~~~gt~~ 215 (348)
T 1u5q_A 207 -----------------------------------------------------------------------ANSFVGTPY 215 (348)
T ss_dssp -----------------------------------------------------------------------BCCCCSCGG
T ss_pred -----------------------------------------------------------------------CCcccCCcc
Confidence 023468899
Q ss_pred ccCccccc---CCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCC-CCCCCHHHHHHHHHccccCCC
Q 002843 498 YASPEELS---GGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPS-FLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 498 Y~APEvl~---g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~-~~~~~p~l~dLi~~cL~~dP~ 571 (874)
|+|||++. +..++.++|||||||++|||++|..||... ...+..+.....+.. .....+.+.+||.+||+.||+
T Consensus 216 y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~ 295 (348)
T 1u5q_A 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQ 295 (348)
T ss_dssp GCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred eeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChh
Confidence 99999985 467899999999999999999999987432 112223333332222 233456789999999999999
Q ss_pred CCCChhHHhhhHHHHhh
Q 002843 572 SRPTTREILQSEVTNEF 588 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~~~ 588 (874)
+|||+.++|+||||...
T Consensus 296 ~Rps~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 296 DRPTSEVLLKHRFVLRE 312 (348)
T ss_dssp GSCCHHHHTTCHHHHSC
T ss_pred hCcCHHHHhhChhhhcc
Confidence 99999999999999753
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-33 Score=304.90 Aligned_cols=220 Identities=18% Similarity=0.183 Sum_probs=166.0
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-------------
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR------------- 322 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~------------- 322 (874)
......+..++....||+++.++.....+.. .+++||||+||+|.+++...
T Consensus 72 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----------------~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~ 135 (345)
T 3hko_A 72 VERIKTEVRLMKKLHHPNIARLYEVYEDEQY----------------ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVV 135 (345)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEEECSSE----------------EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCcceeehhhccCCe----------------EEEEEeCCCCCcHHHHHHHhhcccccccccccc
Confidence 3445566677888889999999887653332 25799999999999999521
Q ss_pred --------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCC--cEEEeccc
Q 002843 323 --------------------------GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN--QVKYIGPI 374 (874)
Q Consensus 323 --------------------------~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~--~vKLiDFG 374 (874)
...+++..++.|+.||+.||+|||++||+||||||+|||++.++ .+||+|||
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg 215 (345)
T 3hko_A 136 KTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFG 215 (345)
T ss_dssp CCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCT
T ss_pred cccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeecc
Confidence 11346788999999999999999999999999999999998776 89999999
Q ss_pred cchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCC
Q 002843 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (874)
Q Consensus 375 lar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 454 (874)
+++.+.....
T Consensus 216 ~a~~~~~~~~---------------------------------------------------------------------- 225 (345)
T 3hko_A 216 LSKEFYKLNN---------------------------------------------------------------------- 225 (345)
T ss_dssp TCEEGGGTTC----------------------------------------------------------------------
T ss_pred ccccccccCc----------------------------------------------------------------------
Confidence 9874431000
Q ss_pred CCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC--CCCCCccchhHHHHHHHHhcCCCCch
Q 002843 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGRFDSE 532 (874)
Q Consensus 455 d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g--~~ys~kSDIwSLGVIL~ELltG~~p~ 532 (874)
..........||+.|+|||++.+ ..++.++|||||||++|||++|..||
T Consensus 226 -----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf 276 (345)
T 3hko_A 226 -----------------------------GEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276 (345)
T ss_dssp -----------------------------C--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred -----------------------------cccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 00000135578999999999976 56899999999999999999999998
Q ss_pred HH--HHHHHHHhhcCCC---CCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 533 RA--LAAAMSDLRDRIL---PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 533 ~~--~~~~~~~l~~~~l---pp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.. .......+..... .+.+....+.+.+||.+||.+||.+||++.|+|+||||+...+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~ 339 (345)
T 3hko_A 277 PGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339 (345)
T ss_dssp CCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred CCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence 32 1222233332222 2233345678999999999999999999999999999998654
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-32 Score=296.61 Aligned_cols=215 Identities=14% Similarity=0.093 Sum_probs=158.0
Q ss_pred HHhHHhh-cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHH
Q 002843 262 GAMMVAS-NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIV 339 (874)
Q Consensus 262 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl 339 (874)
+...+.. ..||+++.++.......... .....+++||||+|++|.+++... +..+++..++.|+.||+
T Consensus 70 e~~~l~~l~~h~~i~~~~~~~~~~~~~~----------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~ 139 (326)
T 2x7f_A 70 EINMLKKYSHHRNIATYYGAFIKKNPPG----------MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 139 (326)
T ss_dssp HHHHHHHHCCSTTBCCEEEEEEECC--C----------CCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCCeeeeeeEEeeccCcc----------ccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHH
Confidence 3334444 47999998887765322100 001136799999999999999864 23799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 140 ~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~------------------------------------ 183 (326)
T 2x7f_A 140 RGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV------------------------------------ 183 (326)
T ss_dssp HHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC------------------------------------------
T ss_pred HHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCc------------------------------------
Confidence 99999999999999999999999999999999999876432000
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.......||+.|+
T Consensus 184 -------------------------------------------------------------------~~~~~~~~~~~y~ 196 (326)
T 2x7f_A 184 -------------------------------------------------------------------GRRNTFIGTPYWM 196 (326)
T ss_dssp --------------------------------------------------------------------------CCGGGC
T ss_pred -------------------------------------------------------------------cccccccCCcccc
Confidence 0002346889999
Q ss_pred Cccccc-----CCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCCC-CCCCCHHHHHHHHHccccCCC
Q 002843 500 SPEELS-----GGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPPS-FLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 500 APEvl~-----g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp~-~~~~~p~l~dLi~~cL~~dP~ 571 (874)
|||++. +..++.++|||||||++|+|++|..||.... .....+.....+.. .....+.+.+||.+||..||.
T Consensus 197 aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~ 276 (326)
T 2x7f_A 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHS 276 (326)
T ss_dssp CHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGG
T ss_pred ChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChh
Confidence 999997 4568999999999999999999999884321 11222222222222 233457799999999999999
Q ss_pred CCCChhHHhhhHHHHhhH
Q 002843 572 SRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~~~~ 589 (874)
+||++.++|+||||+...
T Consensus 277 ~Rps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 277 QRPATEQLMKHPFIRDQP 294 (326)
T ss_dssp GSCCHHHHHTSHHHHCCT
T ss_pred hCCCHHHHhhChHHhhCc
Confidence 999999999999998654
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=300.39 Aligned_cols=210 Identities=14% Similarity=0.163 Sum_probs=158.1
Q ss_pred HHHHHHhHHhhcC-CCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 258 LKAAGAMMVASNA-SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 258 ~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
....+..++.... ||+++.+........... .+++||||+|++|.+++. .+++.+++.|+.
T Consensus 76 ~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~--------------~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~ 137 (330)
T 3nsz_A 76 KIKREIKILENLRGGPNIITLADIVKDPVSRT--------------PALVFEHVNNTDFKQLYQ----TLTDYDIRFYMY 137 (330)
T ss_dssp HHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC--------------EEEEEECCCCCCHHHHGG----GCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc--------------eEEEEeccCchhHHHHHH----hCCHHHHHHHHH
Confidence 3344445555554 999998887655321111 267999999999999985 389999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCC-cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~-~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
||+.||+|||++||+||||||+|||++.++ .+||+|||+++.....
T Consensus 138 qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~--------------------------------- 184 (330)
T 3nsz_A 138 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--------------------------------- 184 (330)
T ss_dssp HHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT---------------------------------
T ss_pred HHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC---------------------------------
Confidence 999999999999999999999999999776 8999999998632200
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
.......||
T Consensus 185 -----------------------------------------------------------------------~~~~~~~~~ 193 (330)
T 3nsz_A 185 -----------------------------------------------------------------------QEYNVRVAS 193 (330)
T ss_dssp -----------------------------------------------------------------------CCCCSCCSC
T ss_pred -----------------------------------------------------------------------Ccccccccc
Confidence 000244688
Q ss_pred ccccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHH----HHH------------HHHHhhcC--CCCC-------
Q 002843 496 KWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERA----LAA------------AMSDLRDR--ILPP------- 549 (874)
Q Consensus 496 ~~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~----~~~------------~~~~l~~~--~lpp------- 549 (874)
+.|+|||++.+ ..++.++|||||||++|||++|..||.. ... ....+... ..++
T Consensus 194 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (330)
T 3nsz_A 194 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILG 273 (330)
T ss_dssp GGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHC
T ss_pred ccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhh
Confidence 89999999987 5689999999999999999999888711 000 00001100 0000
Q ss_pred --------------CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 550 --------------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 550 --------------~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
......+.+.+||.+||++||.+|||+.|+|+||||+.+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 274 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp CCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred hccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence 0111457789999999999999999999999999999764
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.98 E-value=8.7e-33 Score=333.01 Aligned_cols=213 Identities=14% Similarity=0.133 Sum_probs=168.7
Q ss_pred HHHHHhHHhh-cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVAS-NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
...+..++.. ..||.++.+.......... +++||||+||+|.++|...+ .+++.+++.|+.|
T Consensus 388 ~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~----------------~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~q 450 (674)
T 3pfq_A 388 TMVEKRVLALPGKPPFLTQLHSCFQTMDRL----------------YFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAE 450 (674)
T ss_dssp HHHHHHHHTCTTCCTTBCCEEEECBCSSEE----------------EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCeEEEEEEEEEeCCEE----------------EEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHH
Confidence 3444444443 4677777776665433322 46999999999999998876 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++|||||||||+||||+.++++||+|||+++......
T Consensus 451 i~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---------------------------------- 496 (674)
T 3pfq_A 451 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---------------------------------- 496 (674)
T ss_dssp HHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT----------------------------------
T ss_pred HHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC----------------------------------
Confidence 9999999999999999999999999999999999999987322000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
......+||+.
T Consensus 497 ---------------------------------------------------------------------~~~~~~~GT~~ 507 (674)
T 3pfq_A 497 ---------------------------------------------------------------------VTTKTFCGTPD 507 (674)
T ss_dssp ---------------------------------------------------------------------CCBCCCCSCSS
T ss_pred ---------------------------------------------------------------------cccccccCCCc
Confidence 00135689999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
|+|||++.+..|+.++||||||||||||++|..||.. ....+..+....+. .....++.+.+||.+||..||.+||+
T Consensus 508 Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~li~~lL~~dP~~R~~ 586 (674)
T 3pfq_A 508 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKRLG 586 (674)
T ss_dssp SCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCC-CCTTSCHHHHHHHHHHSCSSSTTCTT
T ss_pred ccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC-CCccCCHHHHHHHHHHccCCHHHCCC
Confidence 9999999999999999999999999999999999843 23334444443221 11235678999999999999999999
Q ss_pred h-----hHHhhhHHHHhhHhhh
Q 002843 576 T-----REILQSEVTNEFQEVC 592 (874)
Q Consensus 576 a-----~EiL~hp~~~~~~~~~ 592 (874)
+ .||++||||+.+.+..
T Consensus 587 ~~~~~~~ei~~h~ff~~i~w~~ 608 (674)
T 3pfq_A 587 CGPEGERDIKEHAFFRYIDWEK 608 (674)
T ss_dssp CSTTHHHHHHSSGGGSSCCHHH
T ss_pred CCCCcHHHHhcCccccCCCHHH
Confidence 8 9999999999877654
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-32 Score=296.60 Aligned_cols=212 Identities=16% Similarity=0.098 Sum_probs=162.7
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+.......+... .+++||||+|++|.+++......+++.+++.|+.
T Consensus 56 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 121 (295)
T 3ugc_A 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRN--------------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121 (295)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS--------------CEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc--------------eEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHH
Confidence 44556677888889999998877644222211 2579999999999999988665699999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 122 qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------- 169 (295)
T 3ugc_A 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-------------------------------- 169 (295)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC---------------------------------------
T ss_pred HHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcc--------------------------------
Confidence 999999999999999999999999999999999999999874331000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
. ........++.
T Consensus 170 ------------------------~--------------------------------------------~~~~~~~~~~~ 181 (295)
T 3ugc_A 170 ------------------------F--------------------------------------------FKVKEPGESPI 181 (295)
T ss_dssp --------------------------------------------------------------------------CTTCGG
T ss_pred ------------------------e--------------------------------------------eeeccCCCCcc
Confidence 0 00002345678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH------------------HHHHHhhcCCCCCCCCCCCHHH
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA------------------AAMSDLRDRILPPSFLSENPKE 558 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~------------------~~~~~l~~~~lpp~~~~~~p~l 558 (874)
.|+|||++.+..++.++|||||||++|||++|..|+.... .....+.....++......+.+
T Consensus 182 ~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (295)
T 3ugc_A 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI 261 (295)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred ceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHH
Confidence 8999999999899999999999999999999977753221 1222333333444444556789
Q ss_pred HHHHHHccccCCCCCCChhHHhhh
Q 002843 559 AGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 559 ~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.+|+.+||+.||++|||+.|+++.
T Consensus 262 ~~li~~~l~~dp~~Rps~~el~~~ 285 (295)
T 3ugc_A 262 YMIMTECWNNNVNQRPSFRDLALR 285 (295)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcCCChhhCCCHHHHHHH
Confidence 999999999999999999999754
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-32 Score=317.63 Aligned_cols=216 Identities=13% Similarity=0.156 Sum_probs=158.8
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.+...+..++....||+++.++........... ....+++||||+| +|.+++.. .+++.+++.|++
T Consensus 106 ~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~----------~~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~ 171 (464)
T 3ttj_A 106 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE----------FQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLY 171 (464)
T ss_dssp HHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT----------CCEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc----------CCeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHH
Confidence 445566678888899999998887553322100 0113689999986 57777754 499999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 172 qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~---------------------------------- 217 (464)
T 3ttj_A 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---------------------------------- 217 (464)
T ss_dssp HHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----C----------------------------------
T ss_pred HHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC----------------------------------
Confidence 9999999999999999999999999999999999999998743200
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
...+..+||+
T Consensus 218 ----------------------------------------------------------------------~~~~~~~gt~ 227 (464)
T 3ttj_A 218 ----------------------------------------------------------------------FMMTPYVVTR 227 (464)
T ss_dssp ----------------------------------------------------------------------CCC----CCC
T ss_pred ----------------------------------------------------------------------cccCCCcccc
Confidence 0013568899
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc---CC-----------------CCCCCC--
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD---RI-----------------LPPSFL-- 552 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~---~~-----------------lpp~~~-- 552 (874)
+|+|||++.+..|+.++|||||||+||||++|..||.... ..+..+.. .. ..+.+.
T Consensus 228 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (464)
T 3ttj_A 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 307 (464)
T ss_dssp TTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCC
T ss_pred cccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCC
Confidence 9999999999999999999999999999999999884211 11111100 00 000000
Q ss_pred ------------CC-------CHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 553 ------------SE-------NPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 553 ------------~~-------~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.. .+.+.+||.+||.+||++|||+.|+|+||||+....
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 364 (464)
T 3ttj_A 308 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 364 (464)
T ss_dssp CHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred ChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhccC
Confidence 00 245789999999999999999999999999986543
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-32 Score=300.53 Aligned_cols=210 Identities=12% Similarity=0.113 Sum_probs=166.3
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++........ .+++||||+|++|.+++......+++.+++.|+.
T Consensus 95 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ 158 (325)
T 3kul_A 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRL----------------AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR 158 (325)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEEEECGGGC----------------CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEEeCCc----------------cEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHH
Confidence 445667778888899999998876542222 2579999999999999987655899999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 159 qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-------------------------------- 206 (325)
T 3kul_A 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD-------------------------------- 206 (325)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC------------------------------------
T ss_pred HHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCcc--------------------------------
Confidence 999999999999999999999999999999999999999874331000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.........+|+
T Consensus 207 --------------------------------------------------------------------~~~~~~~~~~t~ 218 (325)
T 3kul_A 207 --------------------------------------------------------------------AAYTTTGGKIPI 218 (325)
T ss_dssp --------------------------------------------------------------------CCEECC---CCG
T ss_pred --------------------------------------------------------------------ceeeccCCCCcc
Confidence 000002345678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....++......+.+.+||.+||+.||.+|
T Consensus 219 ~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 298 (325)
T 3kul_A 219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQR 298 (325)
T ss_dssp GGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred cccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhC
Confidence 9999999998899999999999999999999 9988843 223344455554444455567889999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
||+.++++.
T Consensus 299 ps~~eil~~ 307 (325)
T 3kul_A 299 PRFSQIVSV 307 (325)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 999999764
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.98 E-value=2.4e-32 Score=305.65 Aligned_cols=209 Identities=17% Similarity=0.133 Sum_probs=165.0
Q ss_pred HHHHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC------------
Q 002843 257 ALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------------ 323 (874)
Q Consensus 257 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~------------ 323 (874)
.....+..++... .||+++.++.....++. .+++||||+||+|.++|....
T Consensus 131 ~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~ 194 (370)
T 2psq_A 131 SDLVSEMEMMKMIGKHKNIINLLGACTQDGP----------------LYVIVEYASKGNLREYLRARRPPGMEYSYDINR 194 (370)
T ss_dssp HHHHHHHHHHHHSCCCTTBCCEEEEECSSSS----------------CEEEEECCTTCBHHHHHHHTCCC----------
T ss_pred HHHHHHHHHHHHhcCCCCEeeEEEEEccCCC----------------EEEEEEcCCCCCHHHHHHhhCCccccccccccc
Confidence 3455566667666 89999999887553333 256999999999999998753
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccc
Q 002843 324 ---HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSA 400 (874)
Q Consensus 324 ---~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ 400 (874)
..+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 195 ~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~---------------- 258 (370)
T 2psq_A 195 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY---------------- 258 (370)
T ss_dssp -CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCT----------------
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccc----------------
Confidence 2489999999999999999999999999999999999999999999999999874330000
Q ss_pred hhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccc
Q 002843 401 EEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSN 480 (874)
Q Consensus 401 ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~ 480 (874)
T Consensus 259 -------------------------------------------------------------------------------- 258 (370)
T 2psq_A 259 -------------------------------------------------------------------------------- 258 (370)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHH
Q 002843 481 TAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPK 557 (874)
Q Consensus 481 ~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~ 557 (874)
........+|+.|+|||++.+..|+.++|||||||++|||++ |..||... ...+..+.....++......+.
T Consensus 259 -----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (370)
T 2psq_A 259 -----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNE 333 (370)
T ss_dssp -----TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHH
T ss_pred -----eecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHH
Confidence 000023456789999999999899999999999999999999 88887431 2233444444444444455678
Q ss_pred HHHHHHHccccCCCCCCChhHHhhh
Q 002843 558 EAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 558 l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+.+||.+||+.||.+||++.|++++
T Consensus 334 l~~li~~~l~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 334 LYMMMRDCWHAVPSQRPTFKQLVED 358 (370)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999999999875
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3.1e-32 Score=291.66 Aligned_cols=236 Identities=22% Similarity=0.245 Sum_probs=167.8
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccc--cCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC--WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
....+..++....||+++.++.......+... ....+ ....+++||||+|++|.+++...+..+++.+++.++
T Consensus 48 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~ 122 (303)
T 1zy4_A 48 TILSEVMLLASLNHQYVVRYYAAWLERRNFVK-----PMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122 (303)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHH
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHhhcchhh-----hhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHH
Confidence 34556677888899999998776543322110 00000 111468999999999999998766678999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... . ..
T Consensus 123 ~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-----------------~-----~~------ 174 (303)
T 1zy4_A 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD-----------------I-----LK------ 174 (303)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC----------------------------------
T ss_pred HHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccc-----------------h-----hc------
Confidence 9999999999999999999999999999999999999999875431100 0 00
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
..... . ...........||
T Consensus 175 -------------------------~~~~~-----------------------------~-------~~~~~~~~~~~~~ 193 (303)
T 1zy4_A 175 -------------------------LDSQN-----------------------------L-------PGSSDNLTSAIGT 193 (303)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------ccccc-----------------------------c-------cccccccccCCCc
Confidence 00000 0 0000011356789
Q ss_pred ccccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcC--CCCCCCCCC-CHHHHHHHHHccccCCC
Q 002843 496 KWYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDR--ILPPSFLSE-NPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 496 ~~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~--~lpp~~~~~-~p~l~dLi~~cL~~dP~ 571 (874)
+.|+|||++.+. .++.++|||||||++|||++++.+..........+... .+|+.+... .+.+.+||.+||++||.
T Consensus 194 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 273 (303)
T 1zy4_A 194 AMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPN 273 (303)
T ss_dssp CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGG
T ss_pred ccccCcccccCCCCCcchhhHHHHHHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcc
Confidence 999999999875 68999999999999999999877665555555555442 334444333 35689999999999999
Q ss_pred CCCChhHHhhhHHHHh
Q 002843 572 SRPTTREILQSEVTNE 587 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~~ 587 (874)
+|||+.++|+||||..
T Consensus 274 ~Rps~~~ll~h~~~~~ 289 (303)
T 1zy4_A 274 KRPGARTLLNSGWLPV 289 (303)
T ss_dssp GSCCHHHHHHSSCSCC
T ss_pred cCcCHHHHhCCCCcCC
Confidence 9999999999999974
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-32 Score=299.82 Aligned_cols=210 Identities=10% Similarity=0.011 Sum_probs=159.9
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC--CCCHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH--KGKRIECLYI 334 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~--~lse~e~~~I 334 (874)
.....+..++....||+++.++.......... .+++||||+|++|.+++..... .+++.+++.|
T Consensus 52 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i 117 (319)
T 4euu_A 52 DVQMREFEVLKKLNHKNIVKLFAIEEETTTRH--------------KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIV 117 (319)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEEECTTTCC--------------EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcceEEEEeecCCCce--------------EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHH
Confidence 33455667788888999999987655333211 2579999999999999976432 3999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEE----ecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccch
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKL----LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIA 410 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL----~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~ 410 (874)
+.||+.||+|||++||+||||||+|||+ +..+.+||+|||+++.....
T Consensus 118 ~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~---------------------------- 169 (319)
T 4euu_A 118 LRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD---------------------------- 169 (319)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT----------------------------
T ss_pred HHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC----------------------------
Confidence 9999999999999999999999999999 66778999999998643300
Q ss_pred hhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccc
Q 002843 411 SAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVS 490 (874)
Q Consensus 411 ~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t 490 (874)
....
T Consensus 170 ----------------------------------------------------------------------------~~~~ 173 (319)
T 4euu_A 170 ----------------------------------------------------------------------------EQFV 173 (319)
T ss_dssp ----------------------------------------------------------------------------CCBC
T ss_pred ----------------------------------------------------------------------------Ccee
Confidence 0002
Q ss_pred cccccccccCccccc--------CCCCCCccchhHHHHHHHHhcCCCCchHH------HHHHHHHhhcCCCCC-------
Q 002843 491 EQLEEKWYASPEELS--------GGVCTTSSNIYSLGVLFFELFGRFDSERA------LAAAMSDLRDRILPP------- 549 (874)
Q Consensus 491 ~~~GT~~Y~APEvl~--------g~~ys~kSDIwSLGVIL~ELltG~~p~~~------~~~~~~~l~~~~lpp------- 549 (874)
...||+.|+|||++. +..++.++|||||||++|||++|..||.. ....+..+.....+.
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 253 (319)
T 4euu_A 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK 253 (319)
T ss_dssp CCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEEC
T ss_pred ecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhc
Confidence 456899999999986 46789999999999999999999988731 122233332221110
Q ss_pred ----------CCC---CC----CHHHHHHHHHccccCCCCCCChhHHhhhHH
Q 002843 550 ----------SFL---SE----NPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (874)
Q Consensus 550 ----------~~~---~~----~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~ 584 (874)
.+. .. .+.+.+|+.+||..||++|||+.|+|+||-
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 254 AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (319)
T ss_dssp STTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred ccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence 111 11 135789999999999999999999999985
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=7.5e-33 Score=293.67 Aligned_cols=215 Identities=14% Similarity=0.067 Sum_probs=167.4
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+.......+.. +++||||+|++|.+++.... .+++.+++.++.
T Consensus 50 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ 112 (276)
T 2yex_A 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQ----------------YLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFH 112 (276)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEEEETTEE----------------EEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCceeeeeEEEcCCEE----------------EEEEEecCCCcHHHHHhhcc-CCCHHHHHHHHH
Confidence 3344556677778899999888765533322 46999999999999997654 699999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 113 ~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-------------------------------- 160 (276)
T 2yex_A 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------------------------- 160 (276)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE--------------------------------
T ss_pred HHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc--------------------------------
Confidence 999999999999999999999999999999999999998864320000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
........||+
T Consensus 161 ---------------------------------------------------------------------~~~~~~~~~~~ 171 (276)
T 2yex_A 161 ---------------------------------------------------------------------ERLLNKMCGTL 171 (276)
T ss_dssp ---------------------------------------------------------------------ECCBCCCCSCG
T ss_pred ---------------------------------------------------------------------hhcccCCcccc
Confidence 00012457889
Q ss_pred cccCcccccCCCC-CCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCC
Q 002843 497 WYASPEELSGGVC-TTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 497 ~Y~APEvl~g~~y-s~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
.|+|||++.+..+ +.++|||||||++|||++|..||.... .....+.. ....+.+....+.+.+||.+||+.||.
T Consensus 172 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 251 (276)
T 2yex_A 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPS 251 (276)
T ss_dssp GGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTT
T ss_pred CccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCch
Confidence 9999999988765 789999999999999999998874311 11222222 222222334567889999999999999
Q ss_pred CCCChhHHhhhHHHHhhH
Q 002843 572 SRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~~~~ 589 (874)
+|||+.|+++||||+...
T Consensus 252 ~Rps~~~il~~~~~~~~~ 269 (276)
T 2yex_A 252 ARITIPDIKKDRWYNKPL 269 (276)
T ss_dssp TSCCHHHHTTCTTTTCCC
T ss_pred hCCCHHHHhcCccccChh
Confidence 999999999999998643
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-32 Score=299.11 Aligned_cols=211 Identities=14% Similarity=0.135 Sum_probs=161.6
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.++......... +++||||+|++|.+++...+ .+++..++.|+.||
T Consensus 71 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi 133 (331)
T 4aaa_A 71 AMREIKLLKQLRHENLVNLLEVCKKKKRW----------------YLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQI 133 (331)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEEETTEE----------------EEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCEeeEEEEeecCCEE----------------EEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHH
Confidence 44566778888899999998876533332 56999999999999887665 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 134 ~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------------------- 178 (331)
T 4aaa_A 134 INGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG----------------------------------- 178 (331)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------------------------------------
T ss_pred HHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-----------------------------------
Confidence 999999999999999999999999999999999999986433000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......||++|
T Consensus 179 --------------------------------------------------------------------~~~~~~~~t~~y 190 (331)
T 4aaa_A 179 --------------------------------------------------------------------EVYDDEVATRWY 190 (331)
T ss_dssp -------------------------------------------------------------------------CCCCCTT
T ss_pred --------------------------------------------------------------------cccCCCcCCccc
Confidence 000234688999
Q ss_pred cCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhh--------------------cCCCCCC-----
Q 002843 499 ASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLR--------------------DRILPPS----- 550 (874)
Q Consensus 499 ~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~--------------------~~~lpp~----- 550 (874)
+|||++.+. .++.++|||||||++|||++|..||.... ..+..+. .....+.
T Consensus 191 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (331)
T 4aaa_A 191 RAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKERE 270 (331)
T ss_dssp CCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCC
T ss_pred cCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccc
Confidence 999999875 68999999999999999999998873211 1111100 0011111
Q ss_pred -----CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 551 -----FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 551 -----~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+....+.+.+||.+||++||.+|||+.|+|+||||+...
T Consensus 271 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 314 (331)
T 4aaa_A 271 PLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDG 314 (331)
T ss_dssp CHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGGG
T ss_pred hhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccCC
Confidence 123456789999999999999999999999999998643
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-32 Score=293.49 Aligned_cols=208 Identities=11% Similarity=0.051 Sum_probs=166.2
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.++........ .+++||||+|++|.+++...+ .+++.+++.++.||
T Consensus 61 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi 123 (284)
T 2vgo_A 61 LRREIEIQSHLRHPNILRMYNYFHDRKR----------------IYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEEL 123 (284)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEECSSE----------------EEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCEeeEEEEEEcCCE----------------EEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 4445567777889999988877553322 256999999999999998765 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 124 ~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------ 167 (284)
T 2vgo_A 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL------------------------------------ 167 (284)
T ss_dssp HHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS------------------------------------
T ss_pred HHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccc------------------------------------
Confidence 99999999999999999999999999999999999987532200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......||+.|
T Consensus 168 ---------------------------------------------------------------------~~~~~~~~~~y 178 (284)
T 2vgo_A 168 ---------------------------------------------------------------------RRRTMCGTLDY 178 (284)
T ss_dssp ---------------------------------------------------------------------CBCCCCSCGGG
T ss_pred ---------------------------------------------------------------------ccccccCCCCc
Confidence 00234678999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCCh
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa 576 (874)
+|||++.+..++.++|||||||++|+|++|..||... ......+..... .......+.+.+||.+||+.||.+||++
T Consensus 179 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~ 257 (284)
T 2vgo_A 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL-KFPPFLSDGSKDLISKLLRYHPPQRLPL 257 (284)
T ss_dssp CCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC-CCCTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred CCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcccc-CCCCcCCHHHHHHHHHHhhcCHhhCCCH
Confidence 9999999988999999999999999999999988421 222223322211 1112345778999999999999999999
Q ss_pred hHHhhhHHHHhhH
Q 002843 577 REILQSEVTNEFQ 589 (874)
Q Consensus 577 ~EiL~hp~~~~~~ 589 (874)
.++|+||||+...
T Consensus 258 ~~ll~h~~~~~~~ 270 (284)
T 2vgo_A 258 KGVMEHPWVKANS 270 (284)
T ss_dssp HHHHTCHHHHHHC
T ss_pred HHHhhCHHHHhhc
Confidence 9999999998644
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.1e-32 Score=291.79 Aligned_cols=217 Identities=18% Similarity=0.135 Sum_probs=165.9
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--CCCCHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--HKGKRIECL 332 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~--~~lse~e~~ 332 (874)
.......+..++....||+++.+......++.. +++||||+|++|.+++.... ..+++..+.
T Consensus 62 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 125 (295)
T 2clq_A 62 YSQPLHEEIALHKHLKHKNIVQYLGSFSENGFI----------------KIFMEQVPGGSLSALLRSKWGPLKDNEQTIG 125 (295)
T ss_dssp --HHHHHHHHHHHTCCCTTBCCEEEEEEETTEE----------------EEEEECCSEEEHHHHHHHTTCCCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcE----------------EEEEEeCCCCCHHHHHHhhccCCCccHHHHH
Confidence 334455666778888999999988776544332 46999999999999998753 256799999
Q ss_pred HHHHHHHHHHHHHHHCCCcccCCCCCceEEec-CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchh
Q 002843 333 YIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (874)
Q Consensus 333 ~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~-~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~ 411 (874)
.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+++......
T Consensus 126 ~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~---------------------------- 177 (295)
T 2clq_A 126 FYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN---------------------------- 177 (295)
T ss_dssp HHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------------------------------
T ss_pred HHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC----------------------------
Confidence 99999999999999999999999999999997 8999999999886332000
Q ss_pred hhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccc
Q 002843 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (874)
Q Consensus 412 ~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~ 491 (874)
.....
T Consensus 178 ---------------------------------------------------------------------------~~~~~ 182 (295)
T 2clq_A 178 ---------------------------------------------------------------------------PCTET 182 (295)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ---------------------------------------------------------------------------Ccccc
Confidence 00023
Q ss_pred ccccccccCcccccCCC--CCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHh-hcCCCCCCCCCCCHHHHHHHHHc
Q 002843 492 QLEEKWYASPEELSGGV--CTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDL-RDRILPPSFLSENPKEAGFCLWQ 565 (874)
Q Consensus 492 ~~GT~~Y~APEvl~g~~--ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l-~~~~lpp~~~~~~p~l~dLi~~c 565 (874)
..||+.|+|||++.+.. ++.++|||||||++|||++|..||... ...+... .....+.......+.+.+||.+|
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 262 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKC 262 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHT
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHH
Confidence 46889999999998754 889999999999999999999998432 1111111 11222232334567899999999
Q ss_pred cccCCCCCCChhHHhhhHHHHhhHh
Q 002843 566 LHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 566 L~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
|++||++||++.++|+||||+....
T Consensus 263 l~~dp~~Rps~~~ll~~~~~~~~~~ 287 (295)
T 2clq_A 263 FEPDPDKRACANDLLVDEFLKVSSK 287 (295)
T ss_dssp TCSSTTTSCCHHHHHTSGGGCC---
T ss_pred ccCChhhCCCHHHHhcChhhhhccc
Confidence 9999999999999999999986554
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=8.8e-33 Score=297.37 Aligned_cols=217 Identities=13% Similarity=0.147 Sum_probs=167.2
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYI 334 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I 334 (874)
.......+..++....||+++.++.....++. .+++||||+|++|.+++......+++.+++.+
T Consensus 59 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~ 122 (302)
T 2j7t_A 59 ELEDYIVEIEILATCDHPYIVKLLGAYYHDGK----------------LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVV 122 (302)
T ss_dssp CHHHHHHHHHHHHHCCCTTBCCEEEEEECC-C----------------EEEEEECCTTEEHHHHHHHHTSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCe----------------EEEEEEeCCCCcHHHHHHhhccCCCHHHHHHH
Confidence 33445556677788899999998877653332 25699999999999999875557999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 123 ~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~------------------------------- 171 (302)
T 2j7t_A 123 CRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL------------------------------- 171 (302)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-------------------------------
T ss_pred HHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc-------------------------------
Confidence 9999999999999999999999999999999999999999875322000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
.......|
T Consensus 172 ------------------------------------------------------------------------~~~~~~~~ 179 (302)
T 2j7t_A 172 ------------------------------------------------------------------------QKRDSFIG 179 (302)
T ss_dssp ------------------------------------------------------------------------HC-----C
T ss_pred ------------------------------------------------------------------------cccccccC
Confidence 00023468
Q ss_pred cccccCccccc-----CCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCCC--CCCCCHHHHHHHHHc
Q 002843 495 EKWYASPEELS-----GGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPPS--FLSENPKEAGFCLWQ 565 (874)
Q Consensus 495 T~~Y~APEvl~-----g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp~--~~~~~p~l~dLi~~c 565 (874)
|+.|+|||++. +..++.++|||||||++|||++|..|+.... .....+.....+.. ....++.+.+||.+|
T Consensus 180 ~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 259 (302)
T 2j7t_A 180 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIA 259 (302)
T ss_dssp CGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHH
T ss_pred ChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHH
Confidence 89999999984 5678999999999999999999998874321 12222322222211 123346789999999
Q ss_pred cccCCCCCCChhHHhhhHHHHhhHh
Q 002843 566 LHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 566 L~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
|+.||.+|||+.++|+||||..+..
T Consensus 260 l~~dp~~Rps~~~ll~h~~~~~~~~ 284 (302)
T 2j7t_A 260 LDKNPETRPSAAQLLEHPFVSSITS 284 (302)
T ss_dssp SCSCTTTSCCHHHHTTSTTTTTCCC
T ss_pred cccChhhCCCHHHHhcChHHhhhcc
Confidence 9999999999999999999987654
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-32 Score=300.26 Aligned_cols=208 Identities=14% Similarity=0.028 Sum_probs=165.6
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++.....+. .+++|||+.+|+|.+++......+++..++.|+.
T Consensus 62 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----------------~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~ 124 (327)
T 3poz_A 62 KEILDEAYVMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124 (327)
T ss_dssp HHHHHHHHHHHHCCBTTBCCEEEEEESSS-----------------EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEeEEEEEEecCC-----------------eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHH
Confidence 44556677888889999999887755221 2468999999999999988666899999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 125 qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~-------------------------------- 172 (327)
T 3poz_A 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-------------------------------- 172 (327)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC--------------------------------
T ss_pred HHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcc--------------------------------
Confidence 999999999999999999999999999999999999999875431000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
........||+
T Consensus 173 ---------------------------------------------------------------------~~~~~~~~~t~ 183 (327)
T 3poz_A 173 ---------------------------------------------------------------------EYHAEGGKVPI 183 (327)
T ss_dssp ----------------------------------------------------------------------------CCCG
T ss_pred ---------------------------------------------------------------------cccccCCCccc
Confidence 00002345678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||++|||++ |..||... ......+.....++......+.+.+|+.+||+.||.+|
T Consensus 184 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 263 (327)
T 3poz_A 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSR 263 (327)
T ss_dssp GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGS
T ss_pred cccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhC
Confidence 9999999999999999999999999999999 98888432 12233344444444444556789999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
|++.|++++
T Consensus 264 ps~~ell~~ 272 (327)
T 3poz_A 264 PKFRELIIE 272 (327)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999999876
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.98 E-value=4.7e-33 Score=316.64 Aligned_cols=210 Identities=18% Similarity=0.168 Sum_probs=160.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+..... ... .+++||||+|++|.+++...+ .+++.+++.|+.||
T Consensus 187 ~~~E~~~l~~l~hpniv~l~~~~~-~~~----------------~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi 248 (419)
T 3i6u_A 187 VETEIEILKKLNHPCIIKIKNFFD-AED----------------YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQM 248 (419)
T ss_dssp HHHHHHHHHHCCCTTBCCCCEEEE-SSE----------------EEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEeeEEEEEe-cCc----------------eEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHH
Confidence 345667778889999998876532 111 257999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCC---cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSN---QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~---~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
+.||+|||++||+||||||+|||++.++ .+||+|||+++.....
T Consensus 249 ~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~--------------------------------- 295 (419)
T 3i6u_A 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET--------------------------------- 295 (419)
T ss_dssp HHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------------------------------
T ss_pred HHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCC---------------------------------
Confidence 9999999999999999999999997654 5999999998743200
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
......+||
T Consensus 296 -----------------------------------------------------------------------~~~~~~~gt 304 (419)
T 3i6u_A 296 -----------------------------------------------------------------------SLMRTLCGT 304 (419)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------------------------------------------------ccccccCCC
Confidence 000345789
Q ss_pred ccccCcccccC---CCCCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhcCC---CCCCCCCCCHHHHHHHHHcc
Q 002843 496 KWYASPEELSG---GVCTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRDRI---LPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 496 ~~Y~APEvl~g---~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~~~---lpp~~~~~~p~l~dLi~~cL 566 (874)
+.|+|||++.+ ..|+.++|||||||+||||++|..||.... .....+.... .++.+....+.+.+||.+||
T Consensus 305 ~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L 384 (419)
T 3i6u_A 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL 384 (419)
T ss_dssp CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHS
T ss_pred CCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHc
Confidence 99999999864 568899999999999999999999984311 1122233322 22223455678999999999
Q ss_pred ccCCCCCCChhHHhhhHHHHhhHh
Q 002843 567 HPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
++||.+|||+.|+|+||||++...
T Consensus 385 ~~dP~~Rps~~e~l~hp~~~~~~~ 408 (419)
T 3i6u_A 385 VVDPKARFTTEEALRHPWLQDEDM 408 (419)
T ss_dssp CSSTTTSCCHHHHHHSGGGCCHHH
T ss_pred cCChhHCcCHHHHhCCcccCChhH
Confidence 999999999999999999986543
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=3.9e-32 Score=295.38 Aligned_cols=209 Identities=16% Similarity=0.092 Sum_probs=166.0
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------CCCC
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------HKGK 327 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---------~~ls 327 (874)
.....+..++....||+++.++.....+.. .+++||||+|++|.+++.... ..++
T Consensus 73 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 136 (322)
T 1p4o_A 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQP----------------TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136 (322)
T ss_dssp HHHHHHHHHGGGCCCTTBCCEEEEECSSSS----------------CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCC
T ss_pred HHHHHHHHHHHhcCCCCEeeeEEEEccCCc----------------cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcC
Confidence 345566778888899999988876543222 257999999999999997531 2579
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccc
Q 002843 328 RIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTT 407 (874)
Q Consensus 328 e~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~ 407 (874)
+.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 137 ~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~----------------------- 193 (322)
T 1p4o_A 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY----------------------- 193 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGC-----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccc-----------------------
Confidence 999999999999999999999999999999999999999999999999874331000
Q ss_pred cchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccc
Q 002843 408 GIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQST 487 (874)
Q Consensus 408 ~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~ 487 (874)
..
T Consensus 194 ------------------------------------------------------------------------------~~ 195 (322)
T 1p4o_A 194 ------------------------------------------------------------------------------YR 195 (322)
T ss_dssp ------------------------------------------------------------------------------EE
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred ccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHH
Q 002843 488 SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLW 564 (874)
Q Consensus 488 ~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~ 564 (874)
......||+.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....++......+.+.+||.+
T Consensus 196 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 275 (322)
T 1p4o_A 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM 275 (322)
T ss_dssp GGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred cccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHH
Confidence 0023467889999999998889999999999999999999 7888743 223344444454544455566789999999
Q ss_pred ccccCCCCCCChhHHhhh
Q 002843 565 QLHPEPLSRPTTREILQS 582 (874)
Q Consensus 565 cL~~dP~~RPTa~EiL~h 582 (874)
||+.||.+|||+.|++++
T Consensus 276 ~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 276 CWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp HTCSSGGGSCCHHHHHHH
T ss_pred HcCCCcccCcCHHHHHHH
Confidence 999999999999999987
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=3.5e-32 Score=300.53 Aligned_cols=211 Identities=14% Similarity=0.127 Sum_probs=163.8
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.++......+. .+++||||+| +|.+++......+++.+++.++.||
T Consensus 59 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi 121 (346)
T 1ua2_A 59 ALREIKLLQELSHPNIIGLLDAFGHKSN----------------ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMT 121 (346)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEECCTTC----------------CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCCCeEEEEEeeCCc----------------eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHH
Confidence 3455667778889999998877543322 2579999996 9999998776679999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 122 ~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~----------------------------------- 166 (346)
T 1ua2_A 122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN----------------------------------- 166 (346)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC-----------------------------------
T ss_pred HHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc-----------------------------------
Confidence 999999999999999999999999999999999999987432000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......+||++|
T Consensus 167 --------------------------------------------------------------------~~~~~~~~t~~y 178 (346)
T 1ua2_A 167 --------------------------------------------------------------------RAYTHQVVTRWY 178 (346)
T ss_dssp --------------------------------------------------------------------CCCCCSCCCCTT
T ss_pred --------------------------------------------------------------------ccCCcccccccc
Confidence 001345789999
Q ss_pred cCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc---CCCCCC----------------------
Q 002843 499 ASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD---RILPPS---------------------- 550 (874)
Q Consensus 499 ~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~---~~lpp~---------------------- 550 (874)
+|||++.+. .++.++|||||||++|||++|.+||... ...+..+.. ...+..
T Consensus 179 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (346)
T 1ua2_A 179 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLH 258 (346)
T ss_dssp CCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHH
T ss_pred cCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChH
Confidence 999999764 4899999999999999999998887321 111222211 110000
Q ss_pred --CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 551 --FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 551 --~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+....+.+.+||.+||+.||.+|||+.|+|+||||....
T Consensus 259 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~ 299 (346)
T 1ua2_A 259 HIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 299 (346)
T ss_dssp HHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred HhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence 122346789999999999999999999999999998654
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-32 Score=300.76 Aligned_cols=204 Identities=15% Similarity=-0.001 Sum_probs=157.8
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+...+....||+++.++.... +.. .+++||||.||+|.+++......+++.+++.|+.||+.
T Consensus 64 ~e~~~l~~l~h~~iv~~~~~~~-~~~----------------~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~ 126 (325)
T 3kex_A 64 DHMLAIGSLDHAHIVRLLGLCP-GSS----------------LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 126 (325)
T ss_dssp HHHHHHHTCCCTTBCCEEEEEC-BSS----------------EEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCcCeEEEEEc-CCc----------------cEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHH
Confidence 3445666778999999887543 111 25799999999999999876457999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 127 ~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------ 170 (325)
T 3kex_A 127 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK------------------------------------ 170 (325)
T ss_dssp HHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT------------------------------------
T ss_pred HHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccc------------------------------------
Confidence 99999999999999999999999999999999999875331000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
........||+.|+|
T Consensus 171 -----------------------------------------------------------------~~~~~~~~~~~~y~a 185 (325)
T 3kex_A 171 -----------------------------------------------------------------QLLYSEAKTPIKWMA 185 (325)
T ss_dssp -----------------------------------------------------------------CCC-----CCTTTSC
T ss_pred -----------------------------------------------------------------cccccCCCCcccccC
Confidence 000124467789999
Q ss_pred cccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChh
Q 002843 501 PEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (874)
Q Consensus 501 PEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~ 577 (874)
||++.+..++.++|||||||++|||++ |..||... ......+.....++......+.+.+|+.+||..||.+||++.
T Consensus 186 PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 265 (325)
T 3kex_A 186 LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFK 265 (325)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHH
T ss_pred hHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHH
Confidence 999998899999999999999999999 99988532 122233333322222333456678999999999999999999
Q ss_pred HHhhh
Q 002843 578 EILQS 582 (874)
Q Consensus 578 EiL~h 582 (874)
+++++
T Consensus 266 el~~~ 270 (325)
T 3kex_A 266 ELANE 270 (325)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99887
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.7e-32 Score=292.11 Aligned_cols=211 Identities=20% Similarity=0.134 Sum_probs=168.0
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+......+.. .+++||||+|++|.+++...+ .+++.+++.++.
T Consensus 60 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~ 122 (294)
T 2rku_A 60 EKMSMEISIHRSLAHQHVVGFHGFFEDNDF----------------VFVVLELCRRRSLLELHKRRK-ALTEPEARYYLR 122 (294)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEEECSSE----------------EEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEeeeeeeeccCCE----------------EEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHH
Confidence 334556677888899999998877553332 256999999999999998765 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 123 qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--------------------------------- 169 (294)
T 2rku_A 123 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--------------------------------- 169 (294)
T ss_dssp HHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT---------------------------------
T ss_pred HHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc---------------------------------
Confidence 99999999999999999999999999999999999999886322000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......||+
T Consensus 170 ----------------------------------------------------------------------~~~~~~~~~~ 179 (294)
T 2rku_A 170 ----------------------------------------------------------------------ERKKVLCGTP 179 (294)
T ss_dssp ----------------------------------------------------------------------CCBCCCCSCC
T ss_pred ----------------------------------------------------------------------cccccccCCC
Confidence 0002346889
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
.|+|||++.+..++.++|||||||++|+|++|..||... ......+..... .......+.+.+|+.+||+.||++||
T Consensus 180 ~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp 258 (294)
T 2rku_A 180 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKMLQTDPTARP 258 (294)
T ss_dssp SSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC-CCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred CcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccC-CCccccCHHHHHHHHHHcccChhhCc
Confidence 999999999888999999999999999999999988432 222223333221 11123457789999999999999999
Q ss_pred ChhHHhhhHHHHhh
Q 002843 575 TTREILQSEVTNEF 588 (874)
Q Consensus 575 Ta~EiL~hp~~~~~ 588 (874)
|+.|+|+||||...
T Consensus 259 s~~~ll~~~~~~~~ 272 (294)
T 2rku_A 259 TINELLNDEFFTSG 272 (294)
T ss_dssp CGGGGGGSHHHHTS
T ss_pred CHHHHhhChheecC
Confidence 99999999999854
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=9.3e-33 Score=325.94 Aligned_cols=213 Identities=15% Similarity=0.209 Sum_probs=171.6
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFR 336 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~ 336 (874)
....+..++....||+++.+......+... +++||||+||+|.++|...+ ..+++..++.|+.
T Consensus 230 ~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l----------------~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~ 293 (576)
T 2acx_A 230 MALNEKQILEKVNSRFVVSLAYAYETKDAL----------------CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293 (576)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEEECSSEE----------------EEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEeeEEEEEeeCCEE----------------EEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHH
Confidence 345566778888999999988776543332 56999999999999998754 2599999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++|||||||||+||||+.++.+||+|||+++.+...
T Consensus 294 qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~---------------------------------- 339 (576)
T 2acx_A 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG---------------------------------- 339 (576)
T ss_dssp HHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT----------------------------------
T ss_pred HHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccC----------------------------------
Confidence 9999999999999999999999999999999999999998643200
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
......+||+
T Consensus 340 ----------------------------------------------------------------------~~~~~~~GT~ 349 (576)
T 2acx_A 340 ----------------------------------------------------------------------QTIKGRVGTV 349 (576)
T ss_dssp ----------------------------------------------------------------------CCEECCCSCG
T ss_pred ----------------------------------------------------------------------ccccccCCCc
Confidence 0002457999
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH------HHHHHHhhcCCCCCCC-CCCCHHHHHHHHHccccC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL------AAAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~------~~~~~~l~~~~lpp~~-~~~~p~l~dLi~~cL~~d 569 (874)
.|+|||++.+..|+.++|||||||+||||++|..||... ......+... +..+ ...++.+.+||.+||..|
T Consensus 350 ~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~--~~~~p~~~s~~~~dLI~~lL~~d 427 (576)
T 2acx_A 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV--PEEYSERFSPQARSLCSQLLCKD 427 (576)
T ss_dssp GGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSS
T ss_pred cccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc--cccCCccCCHHHHHHHHHhccCC
Confidence 999999999989999999999999999999999998542 2222222221 2222 234678999999999999
Q ss_pred CCCCC-----ChhHHhhhHHHHhhHhhh
Q 002843 570 PLSRP-----TTREILQSEVTNEFQEVC 592 (874)
Q Consensus 570 P~~RP-----Ta~EiL~hp~~~~~~~~~ 592 (874)
|.+|| ++.||++||||+.+.+..
T Consensus 428 P~~R~g~~~~sa~eil~HpfF~~i~w~~ 455 (576)
T 2acx_A 428 PAERLGCRGGSAREVKEHPLFKKLNFKR 455 (576)
T ss_dssp GGGSTTCSSSHHHHHHTSGGGTTCCHHH
T ss_pred HHHcCCCCCCCHHHHHhChhhccCCHHH
Confidence 99999 789999999999876544
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.2e-32 Score=297.85 Aligned_cols=211 Identities=20% Similarity=0.134 Sum_probs=168.3
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++.....+.. .+++||||+|++|.+++...+ .+++.+++.|+.
T Consensus 86 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~ 148 (335)
T 2owb_A 86 EKMSMEISIHRSLAHQHVVGFHGFFEDNDF----------------VFVVLELCRRRSLLELHKRRK-ALTEPEARYYLR 148 (335)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEEECSSE----------------EEEEECCCTTCBHHHHHHHHC-SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEecCCe----------------EEEEEecCCCCCHHHHHhccC-CCCHHHHHHHHH
Confidence 344556677888899999998877653332 256999999999999998765 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 149 qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--------------------------------- 195 (335)
T 2owb_A 149 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--------------------------------- 195 (335)
T ss_dssp HHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT---------------------------------
T ss_pred HHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc---------------------------------
Confidence 99999999999999999999999999999999999999986332000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......||+
T Consensus 196 ----------------------------------------------------------------------~~~~~~~gt~ 205 (335)
T 2owb_A 196 ----------------------------------------------------------------------ERKKVLCGTP 205 (335)
T ss_dssp ----------------------------------------------------------------------CCBCCCCSCC
T ss_pred ----------------------------------------------------------------------ccccccCCCc
Confidence 0002346889
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
.|+|||++.+..++.++|||||||++|||++|..||... ......+...... ......+.+.+||.+||+.||++||
T Consensus 206 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rp 284 (335)
T 2owb_A 206 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARP 284 (335)
T ss_dssp SSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC-CCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred cccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCC-CCccCCHHHHHHHHHHccCChhHCc
Confidence 999999999988999999999999999999999988431 2222223222211 1123457789999999999999999
Q ss_pred ChhHHhhhHHHHhh
Q 002843 575 TTREILQSEVTNEF 588 (874)
Q Consensus 575 Ta~EiL~hp~~~~~ 588 (874)
++.|+|+||||...
T Consensus 285 s~~ell~~~~~~~~ 298 (335)
T 2owb_A 285 TINELLNDEFFTSG 298 (335)
T ss_dssp CGGGGGGSHHHHTS
T ss_pred CHHHHhcCccccCC
Confidence 99999999999864
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-31 Score=301.20 Aligned_cols=209 Identities=16% Similarity=0.132 Sum_probs=165.9
Q ss_pred HHHHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC------------
Q 002843 257 ALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------------ 323 (874)
Q Consensus 257 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~------------ 323 (874)
.....+..++... .||+++.++.....++. .+++||||+||+|.+++....
T Consensus 119 ~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~ 182 (382)
T 3tt0_A 119 SDLISEMEMMKMIGKHKNIINLLGACTQDGP----------------LYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 182 (382)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEECSSSS----------------CEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCS
T ss_pred HHHHHHHHHHHHhcCCchhhhheeeeccCCc----------------eEEEEEecCCCcHHHHHHHhccccccccccccc
Confidence 3344555556655 89999999887553332 257999999999999998753
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccc
Q 002843 324 ---HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSA 400 (874)
Q Consensus 324 ---~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ 400 (874)
..+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 183 ~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~---------------- 246 (382)
T 3tt0_A 183 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY---------------- 246 (382)
T ss_dssp SCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCT----------------
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccc----------------
Confidence 2599999999999999999999999999999999999999999999999999874330000
Q ss_pred hhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccc
Q 002843 401 EEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSN 480 (874)
Q Consensus 401 ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~ 480 (874)
T Consensus 247 -------------------------------------------------------------------------------- 246 (382)
T 3tt0_A 247 -------------------------------------------------------------------------------- 246 (382)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHH
Q 002843 481 TAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPK 557 (874)
Q Consensus 481 ~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~ 557 (874)
........||+.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....+.......+.
T Consensus 247 -----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (382)
T 3tt0_A 247 -----YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNE 321 (382)
T ss_dssp -----TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHH
T ss_pred -----cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHH
Confidence 000023467889999999999999999999999999999999 8888743 23334455555444444556688
Q ss_pred HHHHHHHccccCCCCCCChhHHhhh
Q 002843 558 EAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 558 l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+.+||.+||+.||++|||+.|++++
T Consensus 322 l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 322 LYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999999999886
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-32 Score=306.27 Aligned_cols=203 Identities=19% Similarity=0.147 Sum_probs=159.2
Q ss_pred CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002843 270 ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG 349 (874)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~g 349 (874)
.||+++.+......+.. .+++||||+|++|.++|...+ .+++.+++.++.||+.||.|||++|
T Consensus 117 ~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ 179 (355)
T 1vzo_A 117 QSPFLVTLHYAFQTETK----------------LHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLG 179 (355)
T ss_dssp TCTTBCCEEEEEEETTE----------------EEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCceeEEEEEEeeCce----------------EEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 68888888776553333 246999999999999998765 7999999999999999999999999
Q ss_pred CcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccccccc
Q 002843 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (874)
Q Consensus 350 IIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~ 429 (874)
|+||||||+|||++.++.+||+|||+++.......
T Consensus 180 ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--------------------------------------------- 214 (355)
T 1vzo_A 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET--------------------------------------------- 214 (355)
T ss_dssp CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG---------------------------------------------
T ss_pred cccCCCCHHHEEECCCCcEEEeeCCCCeecccCCC---------------------------------------------
Confidence 99999999999999999999999999874320000
Q ss_pred CCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC--
Q 002843 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-- 507 (874)
Q Consensus 430 ~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~-- 507 (874)
......+||+.|+|||++.+.
T Consensus 215 ---------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~ 237 (355)
T 1vzo_A 215 ---------------------------------------------------------ERAYDFCGTIEYMAPDIVRGGDS 237 (355)
T ss_dssp ---------------------------------------------------------GGGCGGGSCCTTCCHHHHTTCC-
T ss_pred ---------------------------------------------------------CcccCcccCcCccChhhhcCCCC
Confidence 000245789999999999863
Q ss_pred CCCCccchhHHHHHHHHhcCCCCchHH------HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC-----Ch
Q 002843 508 VCTTSSNIYSLGVLFFELFGRFDSERA------LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TT 576 (874)
Q Consensus 508 ~ys~kSDIwSLGVIL~ELltG~~p~~~------~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP-----Ta 576 (874)
.++.++|||||||+||||++|..||.. .......+.. ..++......+.+.+||.+||.+||.+|| ++
T Consensus 238 ~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~ 316 (355)
T 1vzo_A 238 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK-SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDA 316 (355)
T ss_dssp --CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH-CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTH
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc-cCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCH
Confidence 478999999999999999999998842 1112222221 12222234457789999999999999999 99
Q ss_pred hHHhhhHHHHhhHhhh
Q 002843 577 REILQSEVTNEFQEVC 592 (874)
Q Consensus 577 ~EiL~hp~~~~~~~~~ 592 (874)
.|+++||||..+.+..
T Consensus 317 ~ell~h~~f~~~~~~~ 332 (355)
T 1vzo_A 317 DEIKEHLFFQKINWDD 332 (355)
T ss_dssp HHHHTSGGGTTCCHHH
T ss_pred HHHHcCcchhcCChhH
Confidence 9999999999876543
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.5e-32 Score=316.35 Aligned_cols=208 Identities=19% Similarity=0.210 Sum_probs=168.7
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...+....||+++.++........ .+++||||+|++|.+++.+.+ .+++.+++.|+.||
T Consensus 63 ~~~Ei~~l~~l~HpnIv~l~~~~~~~~~----------------~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi 125 (476)
T 2y94_A 63 IRREIQNLKLFRHPHIIKLYQVISTPSD----------------IFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQI 125 (476)
T ss_dssp HHHHHHHHTTCCCTTBCCEEEEEECSSE----------------EEEEEECCSSEEHHHHTTSSS-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEEECCE----------------EEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 4456677888899999999877654332 256999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 126 ~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~------------------------------------ 169 (476)
T 2y94_A 126 LSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG------------------------------------ 169 (476)
T ss_dssp HHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT------------------------------------
T ss_pred HHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccc------------------------------------
Confidence 99999999999999999999999999999999999998632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......+||+.|
T Consensus 170 --------------------------------------------------------------------~~~~~~~gt~~y 181 (476)
T 2y94_A 170 --------------------------------------------------------------------EFLRTSCGSPNY 181 (476)
T ss_dssp --------------------------------------------------------------------CCBCCCCSCSTT
T ss_pred --------------------------------------------------------------------ccccccCCCcCe
Confidence 000245789999
Q ss_pred cCcccccCCCC-CCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 499 ASPEELSGGVC-TTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 499 ~APEvl~g~~y-s~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
+|||++.+..+ +.++|||||||++|||++|..||.. .......+...... .....++.+.+||.+||..||.+|||
T Consensus 182 ~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~Li~~~L~~dP~~Rpt 260 (476)
T 2y94_A 182 AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFY-TPQYLNPSVISLLKHMLQVDPMKRAT 260 (476)
T ss_dssp CCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCC-CCTTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred EChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcC-CCccCCHHHHHHHHHHcCCCchhCcC
Confidence 99999998776 7899999999999999999999843 22233444443321 11234578999999999999999999
Q ss_pred hhHHhhhHHHHhh
Q 002843 576 TREILQSEVTNEF 588 (874)
Q Consensus 576 a~EiL~hp~~~~~ 588 (874)
+.|+++||||+..
T Consensus 261 ~~eil~hp~~~~~ 273 (476)
T 2y94_A 261 IKDIREHEWFKQD 273 (476)
T ss_dssp HHHHHTCHHHHTT
T ss_pred HHHHHhCHHhhhc
Confidence 9999999999863
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-32 Score=294.06 Aligned_cols=203 Identities=16% Similarity=0.140 Sum_probs=158.5
Q ss_pred hhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHH
Q 002843 254 SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLY 333 (874)
Q Consensus 254 ~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~ 333 (874)
........+..++....||+++.++.....+.. .+++||||+|++|.+++......+++.+++.
T Consensus 54 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 117 (289)
T 4fvq_A 54 NYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE----------------NILVQEFVKFGSLDTYLKKNKNCINILWKLE 117 (289)
T ss_dssp GGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC----------------CEEEEECCTTCBHHHHHHHTGGGCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC----------------CEEEEECCCCCCHHHHHHhCCCCCCHHHHHH
Confidence 344455666778888899999998887553332 2569999999999999988765699999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCc--------EEEeccccchhccccccCCCCcchhhhhhcccchhhhc
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ--------VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMF 405 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~--------vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~df 405 (874)
|+.||+.||.|||++||+||||||+|||++.++. +||+|||+++.....
T Consensus 118 i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----------------------- 174 (289)
T 4fvq_A 118 VAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK----------------------- 174 (289)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH-----------------------
T ss_pred HHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc-----------------------
Confidence 9999999999999999999999999999998887 999999987532200
Q ss_pred cccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccc
Q 002843 406 TTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQ 485 (874)
Q Consensus 406 g~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~ 485 (874)
T Consensus 175 -------------------------------------------------------------------------------- 174 (289)
T 4fvq_A 175 -------------------------------------------------------------------------------- 174 (289)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccccccCcccccC-CCCCCccchhHHHHHHHHhcCC-CCchHHHH--HHHHHhhc-CCCCCCCCCCCHHHHH
Q 002843 486 STSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR-FDSERALA--AAMSDLRD-RILPPSFLSENPKEAG 560 (874)
Q Consensus 486 ~~~~t~~~GT~~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG-~~p~~~~~--~~~~~l~~-~~lpp~~~~~~p~l~d 560 (874)
....||+.|+|||++.+ ..++.++|||||||++|||++| .+|+.... ........ ..+++ ...+.+.+
T Consensus 175 ----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~ 247 (289)
T 4fvq_A 175 ----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPA---PKAAELAN 247 (289)
T ss_dssp ----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---CSSCTTHH
T ss_pred ----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCC---CCCHHHHH
Confidence 12346788999999988 6699999999999999999995 45543211 11222222 22222 22456889
Q ss_pred HHHHccccCCCCCCChhHHhhh
Q 002843 561 FCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 561 Li~~cL~~dP~~RPTa~EiL~h 582 (874)
|+.+||+.||.+|||+.|++++
T Consensus 248 li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 248 LINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHHcCCChhHCcCHHHHHHH
Confidence 9999999999999999999876
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-32 Score=307.41 Aligned_cols=219 Identities=16% Similarity=0.222 Sum_probs=156.6
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYI 334 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I 334 (874)
...+...+..++....||+++.+++......... .....+++|||+ |++|.+++... .+++.+++.+
T Consensus 71 ~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~----------~~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i 137 (367)
T 2fst_X 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE----------EFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFL 137 (367)
T ss_dssp HHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG----------GCCCCEEEEECC-CEECC-----C--CCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc----------cCCeEEEEeccc-CCCHHHHHhcC--CCCHHHHHHH
Confidence 3445566777888889999998887654322110 011246899999 68999999764 6999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
++||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 138 ~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~--------------------------------- 184 (367)
T 2fst_X 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD--------------------------------- 184 (367)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC------------------------------------------
T ss_pred HHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccc---------------------------------
Confidence 99999999999999999999999999999999999999999863220
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
..+..+|
T Consensus 185 -------------------------------------------------------------------------~~~~~~~ 191 (367)
T 2fst_X 185 -------------------------------------------------------------------------EMTGYVA 191 (367)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------cCCCcCc
Confidence 0024578
Q ss_pred cccccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc---C-------------------CC--
Q 002843 495 EKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD---R-------------------IL-- 547 (874)
Q Consensus 495 T~~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~---~-------------------~l-- 547 (874)
|++|+|||++.+ ..|+.++|||||||++|||++|..||.... ..+..+.. . .+
T Consensus 192 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~ 271 (367)
T 2fst_X 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 271 (367)
T ss_dssp CCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCC
T ss_pred CcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCC
Confidence 999999999987 579999999999999999999998873211 11111110 0 00
Q ss_pred -C-----CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 548 -P-----PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 548 -p-----p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
+ ..+....+.+.+||.+||.+||.+|||+.|+|+||||+......
T Consensus 272 ~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~ 322 (367)
T 2fst_X 272 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322 (367)
T ss_dssp CCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCGG
T ss_pred CCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccCCC
Confidence 0 01234467789999999999999999999999999999765543
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5e-32 Score=291.45 Aligned_cols=212 Identities=16% Similarity=0.084 Sum_probs=164.9
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+......++... .+++||||+|++|.+++......+++.+++.|+.
T Consensus 68 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 133 (302)
T 4e5w_A 68 ADLKKEIEILRNLYHENIVKYKGICTEDGGNG--------------IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV 133 (302)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEEEC---CC--------------EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCeeeeeeEEecCCCce--------------EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHH
Confidence 34555667788888999999887765443222 2579999999999999976655799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 134 ~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------- 181 (302)
T 4e5w_A 134 QICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE-------------------------------- 181 (302)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCC--------------------------------
T ss_pred HHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCc--------------------------------
Confidence 999999999999999999999999999999999999999874330000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.........||.
T Consensus 182 --------------------------------------------------------------------~~~~~~~~~~~~ 193 (302)
T 4e5w_A 182 --------------------------------------------------------------------YYTVKDDRDSPV 193 (302)
T ss_dssp --------------------------------------------------------------------EEECCCCTTCCG
T ss_pred --------------------------------------------------------------------ceeccCCCCCCc
Confidence 000002446788
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH-----------------HHHHHhhcCCCCCCCCCCCHHHH
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA-----------------AAMSDLRDRILPPSFLSENPKEA 559 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~-----------------~~~~~l~~~~lpp~~~~~~p~l~ 559 (874)
.|+|||++.+..++.++|||||||++|||++|..|+.... .....+......+......+.+.
T Consensus 194 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 273 (302)
T 4e5w_A 194 FWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVY 273 (302)
T ss_dssp GGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred cccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHH
Confidence 9999999999889999999999999999999988753222 12233333334444445567899
Q ss_pred HHHHHccccCCCCCCChhHHhhh
Q 002843 560 GFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 560 dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+|+.+||+.||.+|||+.++++.
T Consensus 274 ~li~~~l~~dp~~Rps~~~ll~~ 296 (302)
T 4e5w_A 274 QLMRKCWEFQPSNRTSFQNLIEG 296 (302)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHcCCCCCCCCCHHHHHHH
Confidence 99999999999999999999763
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=6.3e-33 Score=306.07 Aligned_cols=202 Identities=17% Similarity=0.175 Sum_probs=163.2
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCC-CHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGV-NLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~Gg-sL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
.+..++....||+++.+++....++.. +++|||+.+| +|.+++.... .+++..++.|+.||+
T Consensus 78 ~E~~~l~~l~h~~Iv~~~~~~~~~~~~----------------~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~ 140 (335)
T 3dls_A 78 LEIAILSRVEHANIIKVLDIFENQGFF----------------QLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLV 140 (335)
T ss_dssp HHHHHHTTCCCTTBCCEEEEEECSSEE----------------EEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEeeEEEEEeeCCEE----------------EEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHH
Confidence 345567777899999988876533332 4699999766 9999998876 799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 141 ~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~------------------------------------- 183 (335)
T 3dls_A 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG------------------------------------- 183 (335)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT-------------------------------------
T ss_pred HHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCC-------------------------------------
Confidence 9999999999999999999999999999999999998643200
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.......||+.|+
T Consensus 184 -------------------------------------------------------------------~~~~~~~gt~~y~ 196 (335)
T 3dls_A 184 -------------------------------------------------------------------KLFYTFCGTIEYC 196 (335)
T ss_dssp -------------------------------------------------------------------CCBCEECSCGGGC
T ss_pred -------------------------------------------------------------------CceeccCCCcccc
Confidence 0002457899999
Q ss_pred CcccccCCCC-CCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhH
Q 002843 500 SPEELSGGVC-TTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (874)
Q Consensus 500 APEvl~g~~y-s~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~E 578 (874)
|||++.+..+ +.++|||||||++|||++|..||..... .+.....++ ...++.+.+||.+||++||.+|||+.|
T Consensus 197 aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~Rps~~e 271 (335)
T 3dls_A 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE---TVEAAIHPP--YLVSKELMSLVSGLLQPVPERRTTLEK 271 (335)
T ss_dssp CHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG---GTTTCCCCS--SCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred ChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH---HHhhccCCC--cccCHHHHHHHHHHccCChhhCcCHHH
Confidence 9999998876 8899999999999999999999864221 111111111 224578999999999999999999999
Q ss_pred HhhhHHHHhh
Q 002843 579 ILQSEVTNEF 588 (874)
Q Consensus 579 iL~hp~~~~~ 588 (874)
+|+||||+..
T Consensus 272 ll~hp~~~~~ 281 (335)
T 3dls_A 272 LVTDPWVTQP 281 (335)
T ss_dssp HHHCTTTTCC
T ss_pred HhcCccccCC
Confidence 9999999863
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.8e-32 Score=287.47 Aligned_cols=208 Identities=15% Similarity=0.075 Sum_probs=166.5
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++.....++. .+++||||+|++|.+++......+++.+++.|+.
T Consensus 50 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ 113 (269)
T 4hcu_A 50 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAP----------------ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 113 (269)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEECSSSS----------------EEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEecCCc----------------eEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHH
Confidence 345556677788889999988876553332 2579999999999999987665799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 114 ~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------- 161 (269)
T 4hcu_A 114 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------------------------------- 161 (269)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH--------------------------------
T ss_pred HHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccccccccc--------------------------------
Confidence 999999999999999999999999999999999999999874331000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......+|+
T Consensus 162 ----------------------------------------------------------------------~~~~~~~~~~ 171 (269)
T 4hcu_A 162 ----------------------------------------------------------------------TSSTGTKFPV 171 (269)
T ss_dssp ----------------------------------------------------------------------HSTTSTTCCG
T ss_pred ----------------------------------------------------------------------ccccCccccc
Confidence 0002335678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....+.......+.+.+|+.+||+.||++|
T Consensus 172 ~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 251 (269)
T 4hcu_A 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDR 251 (269)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred ccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccC
Confidence 9999999998899999999999999999999 8888843 223344455443333334456789999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
|++.|++++
T Consensus 252 ps~~~ll~~ 260 (269)
T 4hcu_A 252 PAFSRLLRQ 260 (269)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 999999887
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-32 Score=295.17 Aligned_cols=218 Identities=14% Similarity=0.118 Sum_probs=156.6
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh-------CCCCCCHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA-------RGHKGKRIEC 331 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~-------~~~~lse~e~ 331 (874)
...+...+....||+++.++.....+.. .+++||||+|++|.+++.. ....+++.++
T Consensus 60 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 123 (303)
T 2vwi_A 60 LLKEIQAMSQCHHPNIVSYYTSFVVKDE----------------LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI 123 (303)
T ss_dssp ------CCCCCCCTTBCCEEEEEESSSC----------------EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHH
T ss_pred HHHHHHHHhhcCCCCEeeEEEEEeecCC----------------cEEEehhccCCchHHHHHHHhhccccccCCCCHHHH
Confidence 3445566777789999988876553332 2569999999999999974 2336999999
Q ss_pred HHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchh
Q 002843 332 LYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (874)
Q Consensus 332 ~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~ 411 (874)
+.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 124 ~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--------------------------- 176 (303)
T 2vwi_A 124 ATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD--------------------------- 176 (303)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-------------------------------
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCC---------------------------
Confidence 99999999999999999999999999999999999999999999874331000
Q ss_pred hhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccc
Q 002843 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (874)
Q Consensus 412 ~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~ 491 (874)
.. .......
T Consensus 177 -----------------------------~~------------------------------------------~~~~~~~ 185 (303)
T 2vwi_A 177 -----------------------------IT------------------------------------------RNKVRKT 185 (303)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------cc------------------------------------------chhhhcc
Confidence 00 0000024
Q ss_pred ccccccccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhhcCCC--------CCCCCCCCHHHH
Q 002843 492 QLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLRDRIL--------PPSFLSENPKEA 559 (874)
Q Consensus 492 ~~GT~~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~~~~l--------pp~~~~~~p~l~ 559 (874)
..||+.|+|||++.+ ..++.++|||||||++|||++|..||... ......+..... +.......+.+.
T Consensus 186 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (303)
T 2vwi_A 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFR 265 (303)
T ss_dssp --CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHH
T ss_pred cCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHH
Confidence 578999999999976 46899999999999999999999888431 111222222111 111223456789
Q ss_pred HHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 560 GFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 560 dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
+||.+||++||.+||++.|+|+||||+....
T Consensus 266 ~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 296 (303)
T 2vwi_A 266 KMISLCLQKDPEKRPTAAELLRHKFFQKAKN 296 (303)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHTSTTC-----
T ss_pred HHHHHHccCChhhCcCHHHHhhChhhhcCCC
Confidence 9999999999999999999999999987654
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.98 E-value=2.9e-32 Score=320.23 Aligned_cols=214 Identities=17% Similarity=0.154 Sum_probs=170.3
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---CCCCHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---HKGKRIECLYI 334 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---~~lse~e~~~I 334 (874)
....+..++....||+++.+......+... +++||||+||+|.++|.... ..+++..++.|
T Consensus 231 ~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l----------------~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~ 294 (543)
T 3c4z_A 231 GAMVEKKILAKVHSRFIVSLAYAFETKTDL----------------CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294 (543)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEEECSSEE----------------EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEeeEEEEEeeCCEE----------------EEEEEeccCCCHHHHHHHhhcccccccHHHHHHH
Confidence 345566777888999999888776543332 56999999999999997642 36999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+....
T Consensus 295 ~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~------------------------------- 343 (543)
T 3c4z_A 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ------------------------------- 343 (543)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-------------------------------
T ss_pred HHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC-------------------------------
Confidence 9999999999999999999999999999999999999999987432000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
......+|
T Consensus 344 ------------------------------------------------------------------------~~~~~~~G 351 (543)
T 3c4z_A 344 ------------------------------------------------------------------------TKTKGYAG 351 (543)
T ss_dssp ------------------------------------------------------------------------CCBCCCCS
T ss_pred ------------------------------------------------------------------------cccccccC
Confidence 00024579
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH------HHHHHHhhcCCCCCCCCCCCHHHHHHHHHcccc
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL------AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~------~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~ 568 (874)
|+.|+|||++.+..|+.++|||||||+||||++|..||... ......+..... ......++.+.+||.+||.+
T Consensus 352 T~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~lL~~ 430 (543)
T 3c4z_A 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV-TYPDKFSPASKDFCEALLQK 430 (543)
T ss_dssp CTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHSCS
T ss_pred CccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhccc-CCCcccCHHHHHHHHHhccC
Confidence 99999999999989999999999999999999999998432 223333332221 11123467899999999999
Q ss_pred CCCCCCC-----hhHHhhhHHHHhhHhh
Q 002843 569 EPLSRPT-----TREILQSEVTNEFQEV 591 (874)
Q Consensus 569 dP~~RPT-----a~EiL~hp~~~~~~~~ 591 (874)
||.+||+ +.+|++||||+.+.+.
T Consensus 431 dP~~R~~~~~~~a~ei~~Hpff~~i~w~ 458 (543)
T 3c4z_A 431 DPEKRLGFRDGSCDGLRTHPLFRDISWR 458 (543)
T ss_dssp SGGGSCCCBTTBSHHHHTSGGGTTCCHH
T ss_pred CHhHCCCCcccCHHHHHcCccccCCCHH
Confidence 9999996 4899999999987654
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.5e-32 Score=290.60 Aligned_cols=209 Identities=14% Similarity=0.110 Sum_probs=163.9
Q ss_pred HHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 260 AAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 260 ~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
..+..++... .||+++.+......+.. .+++||||+|++|.+++.... .+++.+++.++.||
T Consensus 71 ~~e~~~l~~l~~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi 133 (298)
T 1phk_A 71 LKEVDILRKVSGHPNIIQLKDTYETNTF----------------FFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRAL 133 (298)
T ss_dssp HHHHHHHHHHTTCTTBCCEEEEEECSSE----------------EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEeeeeeeeccCCe----------------EEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHH
Confidence 3444555555 59999998876553322 256999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 134 ~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~------------------------------------ 177 (298)
T 1phk_A 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG------------------------------------ 177 (298)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT------------------------------------
T ss_pred HHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCC------------------------------------
Confidence 99999999999999999999999999999999999987632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......||+.|
T Consensus 178 --------------------------------------------------------------------~~~~~~~~~~~y 189 (298)
T 1phk_A 178 --------------------------------------------------------------------EKLREVCGTPSY 189 (298)
T ss_dssp --------------------------------------------------------------------CCBCCCCSCGGG
T ss_pred --------------------------------------------------------------------cccccccCCccc
Confidence 000234678999
Q ss_pred cCccccc------CCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCC---CCCCCCCCHHHHHHHHHccc
Q 002843 499 ASPEELS------GGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRIL---PPSFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 499 ~APEvl~------g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~l---pp~~~~~~p~l~dLi~~cL~ 567 (874)
+|||++. ...++.++|||||||++|||++|..||.. .......+..... .+.+....+.+.+||.+||+
T Consensus 190 ~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 269 (298)
T 1phk_A 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLV 269 (298)
T ss_dssp CCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCC
T ss_pred cCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHcc
Confidence 9999985 45689999999999999999999988732 1222233333222 22333456779999999999
Q ss_pred cCCCCCCChhHHhhhHHHHhhH
Q 002843 568 PEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.||.+|||+.|+|+||||+...
T Consensus 270 ~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 270 VQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp SSGGGSCCHHHHTTSGGGCTTC
T ss_pred CCcccCCCHHHHHhChHhhhcc
Confidence 9999999999999999998654
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=7.4e-32 Score=295.41 Aligned_cols=209 Identities=16% Similarity=0.091 Sum_probs=165.1
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-------------
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------------- 323 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~------------- 323 (874)
.....+..++....||+++.++.....+.. .+++||||+|++|.++|....
T Consensus 95 ~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 158 (343)
T 1luf_A 95 ADFQREAALMAEFDNPNIVKLLGVCAVGKP----------------MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 158 (343)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEECSSSS----------------CEEEEECCTTCBHHHHHHHTCC------------
T ss_pred HHHHHHHHHHHhCCCCCEEEEEEEEccCCc----------------eEEEEecCCCCcHHHHHHHhCccccccccccccc
Confidence 335556677888899999998876543222 257999999999999998742
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhh
Q 002843 324 ----------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENY 393 (874)
Q Consensus 324 ----------~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~ 393 (874)
..+++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 159 ~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--------- 229 (343)
T 1luf_A 159 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY--------- 229 (343)
T ss_dssp ----------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC---------
T ss_pred ccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCcc---------
Confidence 3699999999999999999999999999999999999999999999999999875431000
Q ss_pred hhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCC
Q 002843 394 RLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKS 473 (874)
Q Consensus 394 ~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s 473 (874)
T Consensus 230 -------------------------------------------------------------------------------- 229 (343)
T 1luf_A 230 -------------------------------------------------------------------------------- 229 (343)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCC
Q 002843 474 SSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPS 550 (874)
Q Consensus 474 ~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~ 550 (874)
........||+.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....++.
T Consensus 230 ------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~ 297 (343)
T 1luf_A 230 ------------YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILAC 297 (343)
T ss_dssp ------------BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC
T ss_pred ------------ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCC
Confidence 000023467889999999998899999999999999999999 8888743 2233444555444444
Q ss_pred CCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 551 ~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.....+.+.+||.+||+.||.+||++.+++++
T Consensus 298 ~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~ 329 (343)
T 1luf_A 298 PENCPLELYNLMRLCWSKLPADRPSFCSIHRI 329 (343)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 44556789999999999999999999999754
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-32 Score=296.15 Aligned_cols=179 Identities=20% Similarity=0.223 Sum_probs=141.9
Q ss_pred ceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEec------------------
Q 002843 304 LRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ------------------ 364 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~------------------ 364 (874)
+++|||| +++|.+++...+ ..+++.+++.|+.||+.||+|||++||+||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~ 171 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTL 171 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccc
Confidence 5799999 899999998754 36899999999999999999999999999999999999987
Q ss_pred -CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccc
Q 002843 365 -SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (874)
Q Consensus 365 -~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~ 443 (874)
++.+||+|||+++....
T Consensus 172 ~~~~~kl~Dfg~~~~~~~-------------------------------------------------------------- 189 (339)
T 1z57_A 172 INPDIKVVDFGSATYDDE-------------------------------------------------------------- 189 (339)
T ss_dssp SCCCEEECCCSSCEETTS--------------------------------------------------------------
T ss_pred cCCCceEeeCcccccCcc--------------------------------------------------------------
Confidence 56799999998752110
Q ss_pred cccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHH
Q 002843 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFF 523 (874)
Q Consensus 444 ~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ 523 (874)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 190 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ 225 (339)
T 1z57_A 190 --------------------------------------------HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILI 225 (339)
T ss_dssp --------------------------------------------CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCccccChHHhhCCCCCcchhhHHHHHHHH
Confidence 002447889999999999989999999999999999
Q ss_pred HhcCCCCchHH-----HHHHHHHhhcCCCCC--------------------------------------CCC---CCCHH
Q 002843 524 ELFGRFDSERA-----LAAAMSDLRDRILPP--------------------------------------SFL---SENPK 557 (874)
Q Consensus 524 ELltG~~p~~~-----~~~~~~~l~~~~lpp--------------------------------------~~~---~~~p~ 557 (874)
||++|..||.. ....+..+.. .+|+ ... ...+.
T Consensus 226 el~~g~~pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (339)
T 1z57_A 226 EYYLGFTVFPTHDSKEHLAMMERILG-PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304 (339)
T ss_dssp HHHHSSCSCCCSCHHHHHHHHHHHHC-SCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHH
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhC-CCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHH
Confidence 99999888732 1111111111 1110 000 11245
Q ss_pred HHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 558 EAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 558 l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
+.+||.+||++||.+|||+.|+|+||||+.+++
T Consensus 305 l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 337 (339)
T 1z57_A 305 LFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337 (339)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred HHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence 789999999999999999999999999998764
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-32 Score=293.97 Aligned_cols=205 Identities=17% Similarity=0.112 Sum_probs=156.2
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC--CCCHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH--KGKRIECLYIF 335 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~--~lse~e~~~I~ 335 (874)
....+...+....||+++.++........ .+++||||+|++|.+++...+. .+++.+++.|+
T Consensus 80 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~ 143 (309)
T 3p86_A 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPN----------------LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143 (309)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEECSTTC----------------CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEECCc----------------eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHH
Confidence 34566677888889999998877553332 2579999999999999987542 39999999999
Q ss_pred HHHHHHHHHHHHCC--CcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 336 RQIVALVDYHHTQG--VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 336 ~QIl~aL~yLHs~g--IIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
.||+.||+|||++| |+||||||+|||++.++.+||+|||+++......
T Consensus 144 ~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~------------------------------ 193 (309)
T 3p86_A 144 YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF------------------------------ 193 (309)
T ss_dssp HHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---------------------------------------
T ss_pred HHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc------------------------------
Confidence 99999999999999 9999999999999999999999999986322000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
.......
T Consensus 194 -------------------------------------------------------------------------~~~~~~~ 200 (309)
T 3p86_A 194 -------------------------------------------------------------------------LSSKSAA 200 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------------------------------------cccccCC
Confidence 0002457
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcC-CCCCCCCCCCHHHHHHHHHccccCC
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDR-ILPPSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~-~lpp~~~~~~p~l~dLi~~cL~~dP 570 (874)
||+.|+|||++.+..++.++|||||||++|||++|..||.... .....+... ...+......+.+.+||.+||..||
T Consensus 201 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP 280 (309)
T 3p86_A 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEP 280 (309)
T ss_dssp -CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred CCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCCh
Confidence 8999999999999999999999999999999999999985322 222222222 2222223456789999999999999
Q ss_pred CCCCChhHHhh
Q 002843 571 LSRPTTREILQ 581 (874)
Q Consensus 571 ~~RPTa~EiL~ 581 (874)
.+|||+.++++
T Consensus 281 ~~Rps~~~ll~ 291 (309)
T 3p86_A 281 WKRPSFATIMD 291 (309)
T ss_dssp GGSCCHHHHHH
T ss_pred hhCcCHHHHHH
Confidence 99999999987
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-32 Score=293.12 Aligned_cols=212 Identities=14% Similarity=0.077 Sum_probs=145.7
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.++........ .+++||||+|++|.+++......+++.+++.++.|
T Consensus 57 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~q 120 (278)
T 3cok_A 57 RVQNEVKIHCQLKHPSILELYNYFEDSNY----------------VYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ 120 (278)
T ss_dssp HHHHHHHHHTTBCCTTBCCEEEEEECSSE----------------EEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCeEeEEEEEccCCe----------------EEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHH
Confidence 34456667788889999988877553322 25699999999999999887558999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 121 i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~---------------------------------- 166 (278)
T 3cok_A 121 IITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH---------------------------------- 166 (278)
T ss_dssp HHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-------------------------------------
T ss_pred HHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC----------------------------------
Confidence 9999999999999999999999999999999999999876332000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......||+.
T Consensus 167 ---------------------------------------------------------------------~~~~~~~~~~~ 177 (278)
T 3cok_A 167 ---------------------------------------------------------------------EKHYTLCGTPN 177 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------------------------------------------CcceeccCCCC
Confidence 00023468899
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
|+|||++.+..++.++|||||||++|||++|..||.... .....+..... .......+.+.+||.+||+.||++|||
T Consensus 178 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps 256 (278)
T 3cok_A 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY-EMPSFLSIEAKDLIHQLLRRNPADRLS 256 (278)
T ss_dssp --------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCC-CCCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred cCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhccc-CCccccCHHHHHHHHHHcccCHhhCCC
Confidence 999999998889999999999999999999999885321 11111111110 111223567899999999999999999
Q ss_pred hhHHhhhHHHHhhH
Q 002843 576 TREILQSEVTNEFQ 589 (874)
Q Consensus 576 a~EiL~hp~~~~~~ 589 (874)
+.++|+||||....
T Consensus 257 ~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 257 LSSVLDHPFMSRNS 270 (278)
T ss_dssp HHHHTTSTTTC---
T ss_pred HHHHhcCccccCCC
Confidence 99999999998654
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-32 Score=299.54 Aligned_cols=230 Identities=18% Similarity=0.174 Sum_probs=167.1
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
......+..++....||+++.++.....+.... ....+++|||+. ++|.+++... .+++.+++.++
T Consensus 53 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-----------~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~ 118 (353)
T 2b9h_A 53 ALRTLREIKILKHFKHENIITIFNIQRPDSFEN-----------FNEVYIIQELMQ-TDLHRVISTQ--MLSDDHIQYFI 118 (353)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTT-----------CCCEEEEECCCS-EEHHHHHHHC--CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCCCcCCeeeeecccccCc-----------cceEEEEEeccC-ccHHHHHhhc--CCCHHHHHHHH
Confidence 344556777888889999998877543221100 012468999998 5999999875 69999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
.||+.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 119 ~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~------------------------------ 168 (353)
T 2b9h_A 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD------------------------------ 168 (353)
T ss_dssp HHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC-----------------------------------
T ss_pred HHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccccccc------------------------------
Confidence 99999999999999999999999999999999999999998754311000
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
.. ... .........+||
T Consensus 169 -------------------------~~------------------------------------~~~--~~~~~~~~~~gt 185 (353)
T 2b9h_A 169 -------------------------NS------------------------------------EPT--GQQSGMVEFVAT 185 (353)
T ss_dssp --------------------------------------------------------------------------CCCCCC
T ss_pred -------------------------cc------------------------------------Ccc--ccccchhhcccc
Confidence 00 000 000011356789
Q ss_pred ccccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH-----HHHHHhhcCC--------------------C--
Q 002843 496 KWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA-----AAMSDLRDRI--------------------L-- 547 (874)
Q Consensus 496 ~~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~-----~~~~~l~~~~--------------------l-- 547 (874)
+.|+|||++.+ ..++.++|||||||++|||++|..||.... ..+..+.... +
T Consensus 186 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (353)
T 2b9h_A 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPM 265 (353)
T ss_dssp GGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCC
T ss_pred ccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccC
Confidence 99999998765 668999999999999999999998873211 1111111100 0
Q ss_pred -C-----CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 548 -P-----PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 548 -p-----p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
+ ..+....+.+.+||.+||++||++|||+.|+|+||||+......
T Consensus 266 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~ 316 (353)
T 2b9h_A 266 YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316 (353)
T ss_dssp CCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTT
T ss_pred CCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCcc
Confidence 0 01124457789999999999999999999999999999876543
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-32 Score=300.47 Aligned_cols=210 Identities=18% Similarity=0.200 Sum_probs=145.2
Q ss_pred HhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHH
Q 002843 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVAL 341 (874)
Q Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~a 341 (874)
..++....||+++.++.......... ...+++||||+||+|.+++...+ ..+++.+++.|+.||+.|
T Consensus 73 ~~~~~~~~h~~i~~~~~~~~~~~~~~------------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~ 140 (336)
T 3fhr_A 73 DHHWQASGGPHIVCILDVYENMHHGK------------RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 140 (336)
T ss_dssp HHHHHHTTSTTBCCEEEEEEEEETTE------------EEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCChHHHHHHHhhccCCC------------ceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 34566778999988877644211100 00257999999999999998753 369999999999999999
Q ss_pred HHHHHHCCCcccCCCCCceEEecC---CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 342 VDYHHTQGVTFLDLKPSSFKLLQS---NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 342 L~yLHs~gIIHRDLKPsNILL~~~---~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
|.|||++||+||||||+|||++.+ +.+||+|||+++.....
T Consensus 141 l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~------------------------------------ 184 (336)
T 3fhr_A 141 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN------------------------------------ 184 (336)
T ss_dssp HHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---------------------------------------
T ss_pred HHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc------------------------------------
Confidence 999999999999999999999864 45999999988632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......||+.|
T Consensus 185 ---------------------------------------------------------------------~~~~~~~t~~y 195 (336)
T 3fhr_A 185 ---------------------------------------------------------------------ALQTPCYTPYY 195 (336)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------------------------------------------ccccCCCCcCc
Confidence 00234678999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHH------HHhhc---CCCCCCCCCCCHHHHHHHHHccccC
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAM------SDLRD---RILPPSFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~------~~l~~---~~lpp~~~~~~p~l~dLi~~cL~~d 569 (874)
+|||++.+..++.++|||||||++|+|++|..||....... ..+.. ....+.+....+.+.+||.+||..|
T Consensus 196 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 275 (336)
T 3fhr_A 196 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTD 275 (336)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSS
T ss_pred cChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCC
Confidence 99999988889999999999999999999999985433211 11111 1222334456688999999999999
Q ss_pred CCCCCChhHHhhhHHHHhhH
Q 002843 570 PLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 570 P~~RPTa~EiL~hp~~~~~~ 589 (874)
|.+|||+.|+|+||||+...
T Consensus 276 P~~Rpt~~ell~hp~~~~~~ 295 (336)
T 3fhr_A 276 PTERLTITQFMNHPWINQSM 295 (336)
T ss_dssp GGGSCCHHHHHHSHHHHTGG
T ss_pred hhHCcCHHHHhcCccccccc
Confidence 99999999999999998743
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=291.82 Aligned_cols=216 Identities=17% Similarity=0.158 Sum_probs=169.1
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC---CCCCCHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLY 333 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~---~~~lse~e~~~ 333 (874)
.....+...+....||+++.++.......... .+++||||+|++|.+++... ...+++.+++.
T Consensus 50 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 115 (279)
T 2w5a_A 50 QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT--------------LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 115 (279)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTE--------------EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCeEEEEEecCCCce--------------EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHH
Confidence 34556667788889999999887654322211 25799999999999999753 23599999999
Q ss_pred HHHHHHHHHHHHHHCC-----CcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhcccc
Q 002843 334 IFRQIVALVDYHHTQG-----VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTG 408 (874)
Q Consensus 334 I~~QIl~aL~yLHs~g-----IIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~ 408 (874)
|+.||+.||.|||++| |+||||||+|||++.++.+||+|||+++......
T Consensus 116 i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~------------------------- 170 (279)
T 2w5a_A 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT------------------------- 170 (279)
T ss_dssp HHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C-------------------------
T ss_pred HHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc-------------------------
Confidence 9999999999999999 9999999999999999999999999987433000
Q ss_pred chhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccc
Q 002843 409 IASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTS 488 (874)
Q Consensus 409 ~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~ 488 (874)
..
T Consensus 171 ------------------------------------------------------------------------------~~ 172 (279)
T 2w5a_A 171 ------------------------------------------------------------------------------SF 172 (279)
T ss_dssp ------------------------------------------------------------------------------HH
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred cccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHcc
Q 002843 489 VSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 489 ~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL 566 (874)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||.. .......+.....++......+.+.+||.+||
T Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l 252 (279)
T 2w5a_A 173 AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252 (279)
T ss_dssp HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHT
T ss_pred ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHc
Confidence 0234678899999999998899999999999999999999988743 22234445444444333445678999999999
Q ss_pred ccCCCCCCChhHHhhhHHHHhhH
Q 002843 567 HPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+.||.+||++.|+|+|+|+.+-.
T Consensus 253 ~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 253 NLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp CSSGGGSCCHHHHHTSTTCCGGG
T ss_pred CCCcccCCCHHHHHhChhhhhhc
Confidence 99999999999999999988643
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-32 Score=296.94 Aligned_cols=209 Identities=12% Similarity=0.087 Sum_probs=163.9
Q ss_pred HHHHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC-----------
Q 002843 257 ALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH----------- 324 (874)
Q Consensus 257 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~----------- 324 (874)
.....+...+... .||+++.++.....++. .+++||||+||+|.++|.....
T Consensus 93 ~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~ 156 (344)
T 1rjb_A 93 EALMSELKMMTQLGSHENIVNLLGACTLSGP----------------IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN 156 (344)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEECSSSS----------------CEEEEECCTTCBHHHHHHTTTTCC---------
T ss_pred HHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc----------------cEEEEecCCCCcHHHHHhhccccccccccchhh
Confidence 3445555666666 89999998887553332 2579999999999999987542
Q ss_pred -----------CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhh
Q 002843 325 -----------KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENY 393 (874)
Q Consensus 325 -----------~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~ 393 (874)
.+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 157 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--------- 227 (344)
T 1rjb_A 157 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN--------- 227 (344)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT---------
T ss_pred hcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCcc---------
Confidence 379999999999999999999999999999999999999999999999999874330000
Q ss_pred hhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCC
Q 002843 394 RLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKS 473 (874)
Q Consensus 394 ~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s 473 (874)
T Consensus 228 -------------------------------------------------------------------------------- 227 (344)
T 1rjb_A 228 -------------------------------------------------------------------------------- 227 (344)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH---HHHHHHhhcCCCCC
Q 002843 474 SSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL---AAAMSDLRDRILPP 549 (874)
Q Consensus 474 ~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~---~~~~~~l~~~~lpp 549 (874)
........||+.|+|||++.+..++.++|||||||+||||++ |..||... ......+.....++
T Consensus 228 ------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~ 295 (344)
T 1rjb_A 228 ------------YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMD 295 (344)
T ss_dssp ------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCC
T ss_pred ------------ceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCC
Confidence 000024467889999999998899999999999999999998 98888432 22233344444444
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 550 ~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
......+.+.+|+.+||..||.+|||+.+++++
T Consensus 296 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 328 (344)
T 1rjb_A 296 QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 328 (344)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 444456789999999999999999999999876
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=289.56 Aligned_cols=213 Identities=15% Similarity=0.160 Sum_probs=164.0
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
+...+...+....||+++.++.....++.. +++||||+|++|.+++...+ .+++.+++.|+.|
T Consensus 57 ~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~----------------~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~q 119 (294)
T 4eqm_A 57 RFEREVHNSSQLSHQNIVSMIDVDEEDDCY----------------YLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQ 119 (294)
T ss_dssp HHHHHHHHHTTCCBTTBCCEEEEEECSSEE----------------EEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCceEEEeeeeCCeE----------------EEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHH
Confidence 345566778888999999988875533332 46999999999999998876 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 120 i~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------- 166 (294)
T 4eqm_A 120 ILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL--------------------------------- 166 (294)
T ss_dssp HHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--------------------------------------
T ss_pred HHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc---------------------------------
Confidence 99999999999999999999999999999999999999874330000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......||+.
T Consensus 167 ---------------------------------------------------------------------~~~~~~~gt~~ 177 (294)
T 4eqm_A 167 ---------------------------------------------------------------------TQTNHVLGTVQ 177 (294)
T ss_dssp -----------------------------------------------------------------------------CCS
T ss_pred ---------------------------------------------------------------------cccCccccCcc
Confidence 00024578999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhhcCCCCC---CCCCCCHHHHHHHHHccccCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLRDRILPP---SFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~~~~lpp---~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
|+|||++.+..++.++|||||||++|||++|..||... ......+.....+. ......+.+.++|.+||++||.
T Consensus 178 y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~ 257 (294)
T 4eqm_A 178 YFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKA 257 (294)
T ss_dssp SCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGG
T ss_pred ccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHh
Confidence 99999999999999999999999999999999998432 22233333322111 1233457799999999999999
Q ss_pred CCCChhHHhhhHHHHhhH
Q 002843 572 SRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~~~~ 589 (874)
+||+..+.+.++|..-+.
T Consensus 258 ~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 258 NRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp GSCSSHHHHHHHHHTSSS
T ss_pred HccccHHHHHHHHHHHHh
Confidence 999877888888765443
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-32 Score=287.98 Aligned_cols=207 Identities=13% Similarity=0.083 Sum_probs=156.5
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+...+....||+++.++.... ++. .+++||||+|++|.+++......+++.+++.++.
T Consensus 61 ~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 123 (281)
T 1mp8_A 61 EKFLQEALTMRQFDHPHIVKLIGVIT-ENP----------------VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 123 (281)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEEC-SSS----------------CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCccceEEEEEc-cCc----------------cEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHH
Confidence 34556667788889999998876532 111 2579999999999999987765799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 124 qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------- 171 (281)
T 1mp8_A 124 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY-------------------------------- 171 (281)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------------------------------------------
T ss_pred HHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccc--------------------------------
Confidence 999999999999999999999999999999999999999874331000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......+|+
T Consensus 172 ----------------------------------------------------------------------~~~~~~~~~~ 181 (281)
T 1mp8_A 172 ----------------------------------------------------------------------YKASKGKLPI 181 (281)
T ss_dssp -----------------------------------------------------------------------------CCG
T ss_pred ----------------------------------------------------------------------cccccCCCcc
Confidence 0002335678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||++|||++ |..||... ......+.....++......+.+.+|+.+||+.||.+|
T Consensus 182 ~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 261 (281)
T 1mp8_A 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 261 (281)
T ss_dssp GGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred cccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 9999999998889999999999999999996 88887432 12233444444444444556789999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
||+.|++++
T Consensus 262 ps~~~l~~~ 270 (281)
T 1mp8_A 262 PRFTELKAQ 270 (281)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 999999764
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-32 Score=286.81 Aligned_cols=208 Identities=13% Similarity=0.049 Sum_probs=164.0
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+...+....||+++.++.....+.. .+++||||+|++|.+++...+..+++.+++.|+.
T Consensus 48 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ 111 (268)
T 3sxs_A 48 DEFFQEAQTMMKLSHPKLVKFYGVCSKEYP----------------IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCY 111 (268)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEECSSSS----------------EEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEccCCc----------------eEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHH
Confidence 344556667777889999988876543222 2569999999999999987665799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 112 qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-------------------------------- 159 (268)
T 3sxs_A 112 DVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-------------------------------- 159 (268)
T ss_dssp HHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE--------------------------------
T ss_pred HHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhh--------------------------------
Confidence 999999999999999999999999999999999999999864330000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......+|+
T Consensus 160 ----------------------------------------------------------------------~~~~~~~~~~ 169 (268)
T 3sxs_A 160 ----------------------------------------------------------------------VSSVGTKFPV 169 (268)
T ss_dssp ----------------------------------------------------------------------EECCSCCCCG
T ss_pred ----------------------------------------------------------------------hcccCCCcCc
Confidence 0002334577
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....+......++.+.+|+.+||+.||.+|
T Consensus 170 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 249 (268)
T 3sxs_A 170 KWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKR 249 (268)
T ss_dssp GGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGS
T ss_pred ccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhC
Confidence 8999999998889999999999999999999 8888843 222233344433333333446789999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
||+.|++++
T Consensus 250 ps~~~ll~~ 258 (268)
T 3sxs_A 250 PTFQQLLSS 258 (268)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 999999876
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-32 Score=301.37 Aligned_cols=209 Identities=13% Similarity=0.112 Sum_probs=157.1
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++........ .+++||||+|++|.++|...+..+++.+++.|+.
T Consensus 91 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----------------~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~ 154 (373)
T 2qol_A 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKP----------------VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154 (373)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEEEECSSSS----------------CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEeeCCc----------------eEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHH
Confidence 345667788888899999998876543222 2579999999999999988766799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 155 qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-------------------------------- 202 (373)
T 2qol_A 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE-------------------------------- 202 (373)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------------------------------------
T ss_pred HHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCc--------------------------------
Confidence 999999999999999999999999999999999999999874431000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
. ........+|+
T Consensus 203 ------------------------~--------------------------------------------~~~~~~~~~~~ 214 (373)
T 2qol_A 203 ------------------------A--------------------------------------------AYTTRGGKIPI 214 (373)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred ------------------------c--------------------------------------------ceeccCCCcCC
Confidence 0 00001234577
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||+||||++ |..||.. .......+.....++......+.+.+|+.+||+.||.+|
T Consensus 215 ~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 294 (373)
T 2qol_A 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNR 294 (373)
T ss_dssp TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGS
T ss_pred CccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhC
Confidence 8999999999899999999999999999998 9888742 222334444443344444556789999999999999999
Q ss_pred CChhHHhh
Q 002843 574 PTTREILQ 581 (874)
Q Consensus 574 PTa~EiL~ 581 (874)
|++.++++
T Consensus 295 Ps~~~i~~ 302 (373)
T 2qol_A 295 PKFEQIVS 302 (373)
T ss_dssp CCHHHHHH
T ss_pred cCHHHHHH
Confidence 99999976
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-32 Score=297.20 Aligned_cols=181 Identities=17% Similarity=0.176 Sum_probs=141.6
Q ss_pred CceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEE-------------------
Q 002843 303 GLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL------------------- 362 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL------------------- 362 (874)
.+++|||| +++|.+++.... ..+++.+++.|+.||+.||+|||++||+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccc
Confidence 36799999 577878876643 479999999999999999999999999999999999999
Q ss_pred ecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCcccccc
Q 002843 363 LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETAN 442 (874)
Q Consensus 363 ~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~ 442 (874)
+.++.+||+|||+++....
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~------------------------------------------------------------- 194 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHE------------------------------------------------------------- 194 (355)
T ss_dssp ESCCCEEECCCTTCEETTS-------------------------------------------------------------
T ss_pred cCCCcEEEeecCccccccc-------------------------------------------------------------
Confidence 5678899999998752110
Q ss_pred ccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHH
Q 002843 443 ESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLF 522 (874)
Q Consensus 443 ~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL 522 (874)
......||+.|+|||++.+..++.++|||||||+|
T Consensus 195 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 229 (355)
T 2eu9_A 195 ---------------------------------------------HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCIL 229 (355)
T ss_dssp ---------------------------------------------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCcCCCcccCCeeeecCCCCCccchHHHHHHH
Confidence 00244789999999999998999999999999999
Q ss_pred HHhcCCCCchHHH-----HHHHHHhhcCCCCC--------------------------------------CCCC---CCH
Q 002843 523 FELFGRFDSERAL-----AAAMSDLRDRILPP--------------------------------------SFLS---ENP 556 (874)
Q Consensus 523 ~ELltG~~p~~~~-----~~~~~~l~~~~lpp--------------------------------------~~~~---~~p 556 (874)
|||++|..||... ...+..+.. .+|. .... ..+
T Consensus 230 ~el~~g~~pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (355)
T 2eu9_A 230 FEYYRGFTLFQTHENREHLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 308 (355)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHC-CCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHH
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHcC-CCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHH
Confidence 9999999988321 111222111 1110 0000 123
Q ss_pred HHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 557 KEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 557 ~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
.+.+||.+||++||++|||+.|+|+||||+.+...
T Consensus 309 ~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 343 (355)
T 2eu9_A 309 QLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPE 343 (355)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCHH
T ss_pred HHHHHHHHHhcCChhhCcCHHHHhcChhhcCCChh
Confidence 57899999999999999999999999999986543
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=287.03 Aligned_cols=250 Identities=17% Similarity=0.150 Sum_probs=174.5
Q ss_pred cccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCC--ChhHHHHHHHHhHHhhcCC
Q 002843 195 MLSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNAS 271 (874)
Q Consensus 195 ~~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~l~~~~~~ 271 (874)
-+..+.++. +.|.+++| |.||+|...+ ..+.+.+.... +........+..++....|
T Consensus 20 ei~~~~y~~~~~lG~G~~------------g~Vy~~~~~~--------~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h 79 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSF------------GTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79 (289)
T ss_dssp BCCTTSCEEEEEEEECSS------------EEEEEEESSS--------EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred ccCccceeeeeEecCCCC------------eEEEEEEEcC--------ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCC
Confidence 345556655 77777755 6678776321 12222222222 2223345566778888899
Q ss_pred CCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002843 272 PKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVT 351 (874)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gII 351 (874)
|+++.++.... +.. .+++||||+|++|.+++......+++.+++.|+.||+.||.|||++||+
T Consensus 80 ~~iv~~~~~~~-~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~ 142 (289)
T 3og7_A 80 VNILLFMGYST-APQ----------------LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSII 142 (289)
T ss_dssp TTBCCEEEEEC-SSS----------------CEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcEEEEEeecc-CCc----------------cEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99998776321 111 2579999999999999977666899999999999999999999999999
Q ss_pred ccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCC
Q 002843 352 FLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFP 431 (874)
Q Consensus 352 HRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~ 431 (874)
||||||+|||++.++.+||+|||+++.......
T Consensus 143 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 175 (289)
T 3og7_A 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG----------------------------------------------- 175 (289)
T ss_dssp CSCCCGGGEEEETTTEEEECCCC---------------------------------------------------------
T ss_pred cccCccceEEECCCCCEEEccceeccccccccc-----------------------------------------------
Confidence 999999999999999999999999864320000
Q ss_pred CccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccccc---CCC
Q 002843 432 SKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS---GGV 508 (874)
Q Consensus 432 ~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~---g~~ 508 (874)
........||+.|+|||++. +..
T Consensus 176 ------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ 201 (289)
T 3og7_A 176 ------------------------------------------------------SHQFEQLSGSILWMAPEVIRMQDSNP 201 (289)
T ss_dssp --------------------------------------------------------------CCCTTCCHHHHC----CC
T ss_pred ------------------------------------------------------cccccccCCCccccCchhhcccCCCC
Confidence 00012456899999999997 566
Q ss_pred CCCccchhHHHHHHHHhcCCCCchHH---HHHHHHHhhcCCCCCCC----CCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 509 CTTSSNIYSLGVLFFELFGRFDSERA---LAAAMSDLRDRILPPSF----LSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 509 ys~kSDIwSLGVIL~ELltG~~p~~~---~~~~~~~l~~~~lpp~~----~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
++.++|||||||++|||++|..||.. .......+.....++.+ ....+.+.+|+.+||+.||.+|||+.++++
T Consensus 202 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp SCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 89999999999999999999998842 23333444444443332 234577999999999999999999999976
Q ss_pred h
Q 002843 582 S 582 (874)
Q Consensus 582 h 582 (874)
.
T Consensus 282 ~ 282 (289)
T 3og7_A 282 E 282 (289)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=286.81 Aligned_cols=207 Identities=14% Similarity=0.039 Sum_probs=162.2
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+...+....||+++.++.... +.. .+++|||++|++|.+++......+++..++.++.
T Consensus 58 ~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~----------------~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 120 (281)
T 3cc6_A 58 EKFMSEAVIMKNLDHPHIVKLIGIIE-EEP----------------TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 120 (281)
T ss_dssp HHHHHHHHHHHHHCCTTBCCEEEEEC-SSS----------------CEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEc-CCC----------------CEEEEecCCCCCHHHHHHhccccCCHHHHHHHHH
Confidence 44555666777778999998877533 111 2579999999999999987665799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 121 ~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------- 168 (281)
T 3cc6_A 121 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY-------------------------------- 168 (281)
T ss_dssp HHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-------------------------------------
T ss_pred HHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccc--------------------------------
Confidence 999999999999999999999999999999999999999874330000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......+|+
T Consensus 169 ----------------------------------------------------------------------~~~~~~~~~~ 178 (281)
T 3cc6_A 169 ----------------------------------------------------------------------YKASVTRLPI 178 (281)
T ss_dssp --------------------------------------------------------------------------CCCCCG
T ss_pred ----------------------------------------------------------------------cccccCCCCc
Confidence 0002335678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....++......+.+.+|+.+||+.||.+|
T Consensus 179 ~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 258 (281)
T 3cc6_A 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDR 258 (281)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred ceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhC
Confidence 9999999998889999999999999999998 9988732 112233333333333344456789999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
|++.|++++
T Consensus 259 ps~~ell~~ 267 (281)
T 3cc6_A 259 PRFTELVCS 267 (281)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 999999876
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-32 Score=291.66 Aligned_cols=208 Identities=16% Similarity=0.121 Sum_probs=161.5
Q ss_pred HHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC-------------
Q 002843 259 KAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH------------- 324 (874)
Q Consensus 259 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~------------- 324 (874)
...+...+... .||+++.++.....++.. .+++||||+|++|.+++.....
T Consensus 77 ~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~---------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 141 (316)
T 2xir_A 77 LMSELKILIHIGHHLNVVNLLGACTKPGGP---------------LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141 (316)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEECCTTSC---------------CEEEEECCTTEEHHHHHHTCTTSEECC-------C
T ss_pred HHHHHHHHHhcccCCCeeeEEEEEecCCCc---------------eEEEEEcCCCCcHHHHHHhcccccccccccchhhh
Confidence 33444444444 789999888775433221 2579999999999999987542
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchh
Q 002843 325 --KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEE 402 (874)
Q Consensus 325 --~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei 402 (874)
.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 142 ~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------ 203 (316)
T 2xir_A 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD------------------ 203 (316)
T ss_dssp TTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTT------------------
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCcc------------------
Confidence 289999999999999999999999999999999999999999999999999874330000
Q ss_pred hhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccc
Q 002843 403 EMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTA 482 (874)
Q Consensus 403 ~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~ 482 (874)
T Consensus 204 -------------------------------------------------------------------------------- 203 (316)
T 2xir_A 204 -------------------------------------------------------------------------------- 203 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH---HHHHHHHhhcCCCCCCCCCCCHHH
Q 002843 483 QQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA---LAAAMSDLRDRILPPSFLSENPKE 558 (874)
Q Consensus 483 ~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~---~~~~~~~l~~~~lpp~~~~~~p~l 558 (874)
........||+.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....++......+.+
T Consensus 204 ---~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 280 (316)
T 2xir_A 204 ---YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM 280 (316)
T ss_dssp ---SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHH
T ss_pred ---ceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHH
Confidence 000124567889999999999899999999999999999998 8888843 122333444443333334456889
Q ss_pred HHHHHHccccCCCCCCChhHHhhh
Q 002843 559 AGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 559 ~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.+|+.+||+.||.+|||+.|+++|
T Consensus 281 ~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 281 YQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999999999887
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-32 Score=295.42 Aligned_cols=215 Identities=16% Similarity=0.112 Sum_probs=167.5
Q ss_pred hhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHH
Q 002843 254 SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLY 333 (874)
Q Consensus 254 ~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~ 333 (874)
........+..++....||+++.+........... .+++||||+|++|.+++......+++.+++.
T Consensus 66 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 131 (327)
T 3lxl_A 66 DQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS--------------LRLVMEYLPSGCLRDFLQRHRARLDASRLLL 131 (327)
T ss_dssp HHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE--------------EEEEEECCTTCBHHHHHHHHGGGCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce--------------EEEEEeecCCCCHHHHHHhcccCCCHHHHHH
Confidence 33344566777888889999998877654322211 2579999999999999987544799999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 132 i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~----------------------------- 182 (327)
T 3lxl_A 132 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD----------------------------- 182 (327)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCS-----------------------------
T ss_pred HHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCc-----------------------------
Confidence 999999999999999999999999999999999999999999874330000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
.........
T Consensus 183 -----------------------------------------------------------------------~~~~~~~~~ 191 (327)
T 3lxl_A 183 -----------------------------------------------------------------------YYVVREPGQ 191 (327)
T ss_dssp -----------------------------------------------------------------------EEECSSCCC
T ss_pred -----------------------------------------------------------------------cceeeccCC
Confidence 000002446
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH-----------------HHHHhhcCCCCCCCCCCCH
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA-----------------AMSDLRDRILPPSFLSENP 556 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~-----------------~~~~l~~~~lpp~~~~~~p 556 (874)
||+.|+|||++.+..++.++|||||||++|+|++|..|+..... ....+.....++......+
T Consensus 192 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (327)
T 3lxl_A 192 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPA 271 (327)
T ss_dssp SCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCH
T ss_pred ccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccH
Confidence 78899999999998899999999999999999999988743222 1222333444444455667
Q ss_pred HHHHHHHHccccCCCCCCChhHHhhh
Q 002843 557 KEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 557 ~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.+.+|+.+||++||.+|||+.|++++
T Consensus 272 ~l~~li~~~l~~dP~~Rps~~ell~~ 297 (327)
T 3lxl_A 272 EVHELMKLCWAPSPQDRPSFSALGPQ 297 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 89999999999999999999999765
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.3e-32 Score=287.02 Aligned_cols=208 Identities=14% Similarity=0.101 Sum_probs=165.1
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+...+....||+++.++.....+.. .+++||||+|++|.+++......+++.+++.|+.
T Consensus 64 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ 127 (283)
T 3gen_A 64 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRP----------------IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 127 (283)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEECSSSS----------------EEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEeeEEEEEecCCC----------------eEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHH
Confidence 345556677778889999988876543222 2579999999999999987444799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 128 qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~-------------------------------- 175 (283)
T 3gen_A 128 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------------------------------- 175 (283)
T ss_dssp HHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH--------------------------------
T ss_pred HHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccccc--------------------------------
Confidence 999999999999999999999999999999999999999874331000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......+|+
T Consensus 176 ----------------------------------------------------------------------~~~~~~~~~~ 185 (283)
T 3gen_A 176 ----------------------------------------------------------------------TSSVGSKFPV 185 (283)
T ss_dssp ----------------------------------------------------------------------HSTTSTTSCG
T ss_pred ----------------------------------------------------------------------ccccCCccCc
Confidence 0002334678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....+.......+.+.+|+.+||+.||.+|
T Consensus 186 ~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 265 (283)
T 3gen_A 186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADER 265 (283)
T ss_dssp GGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred ccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHC
Confidence 8999999998889999999999999999998 9888743 222344444443333334456789999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
||+.++++|
T Consensus 266 ps~~~ll~~ 274 (283)
T 3gen_A 266 PTFKILLSN 274 (283)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 999999887
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-32 Score=302.63 Aligned_cols=248 Identities=10% Similarity=0.003 Sum_probs=169.2
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
|.|.||+|...+..........+.+.+.................+....|++++.++.....+..
T Consensus 77 ~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~--------------- 141 (365)
T 3e7e_A 77 AFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG--------------- 141 (365)
T ss_dssp SSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC---------------
T ss_pred CCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC---------------
Confidence 34788888422111111222333334444333333333333344444557777777766553333
Q ss_pred CCceEeeccCCCCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEec-----------CC
Q 002843 302 GGLRQGSSDHGVNLREWLNA----RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ-----------SN 366 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~----~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~-----------~~ 366 (874)
.+++||||+||+|.++|.. ....+++.+++.|+.||+.||+|||++|||||||||+||||+. ++
T Consensus 142 -~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 142 -SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp -EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CT
T ss_pred -cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccC
Confidence 2569999999999999975 2347999999999999999999999999999999999999998 89
Q ss_pred cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCcccccccccc
Q 002843 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (874)
Q Consensus 367 ~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l 446 (874)
.+||+|||+++.+....
T Consensus 221 ~~kl~DFG~a~~~~~~~--------------------------------------------------------------- 237 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFP--------------------------------------------------------------- 237 (365)
T ss_dssp TEEECCCTTCEEGGGSC---------------------------------------------------------------
T ss_pred CEEEeeCchhhhhhccC---------------------------------------------------------------
Confidence 99999999987433000
Q ss_pred ccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhc
Q 002843 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (874)
Q Consensus 447 ~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELl 526 (874)
.....+..+||++|+|||++.+..|+.++|||||||++|||+
T Consensus 238 --------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 279 (365)
T 3e7e_A 238 --------------------------------------KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCML 279 (365)
T ss_dssp --------------------------------------TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHH
Confidence 000113567999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 527 GRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 527 tG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+|..||...... ..........+ .....+.+|+..||+.+|.+|++..+.|.+.+-.-+.
T Consensus 280 tg~~pf~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 280 FGTYMKVKNEGG--ECKPEGLFRRL-PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp HSSCCCEEEETT--EEEECSCCTTC-SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred hCCCccccCCCC--ceeechhcccc-CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 999887432110 00000111111 1234578999999999999997776766666554443
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-32 Score=293.39 Aligned_cols=225 Identities=12% Similarity=0.027 Sum_probs=160.3
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-----CCCCHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-----HKGKRI 329 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-----~~lse~ 329 (874)
+......+...+....||+++.++........... ..-.+++||||+|++|.+++.... ..+++.
T Consensus 68 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~----------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 137 (323)
T 3qup_A 68 DIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR----------LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQ 137 (323)
T ss_dssp HHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----------------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHH
T ss_pred HHHHHHHHHHHHHHCCCCceehhhceeeccccccC----------CCccEEEEEeccCCcHHHHHHhhhccccccccCHH
Confidence 34445667778888899999998877553332210 000257999999999999996532 159999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccc
Q 002843 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGI 409 (874)
Q Consensus 330 e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~ 409 (874)
+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 138 ~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~------------------------- 192 (323)
T 3qup_A 138 TLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY------------------------- 192 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------------------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecccccccccccc-------------------------
Confidence 9999999999999999999999999999999999999999999999874331000
Q ss_pred hhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccc
Q 002843 410 ASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSV 489 (874)
Q Consensus 410 ~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~ 489 (874)
....
T Consensus 193 ----------------------------------------------------------------------------~~~~ 196 (323)
T 3qup_A 193 ----------------------------------------------------------------------------YRQG 196 (323)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0000
Q ss_pred ccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHcc
Q 002843 490 SEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 490 t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL 566 (874)
....+++.|+|||++.+..++.++|||||||++|||++ |..||... ......+.....++......+.+.+|+.+||
T Consensus 197 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 276 (323)
T 3qup_A 197 CASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCW 276 (323)
T ss_dssp ----CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTT
T ss_pred ccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCCCccCHHHHHHHHHHc
Confidence 23356789999999999899999999999999999999 88888432 2223344444444444556688999999999
Q ss_pred ccCCCCCCC-------hhHHhhhHHHHhhHh
Q 002843 567 HPEPLSRPT-------TREILQSEVTNEFQE 590 (874)
Q Consensus 567 ~~dP~~RPT-------a~EiL~hp~~~~~~~ 590 (874)
+.||.+||| +.+++.|+|+.....
T Consensus 277 ~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~ 307 (323)
T 3qup_A 277 SADPKQRPSFTCLRMELENILGHLSVLSTSQ 307 (323)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHHC--------
T ss_pred cCChhhCcCHHHHHHHHHHHHHHhhhcCCCC
Confidence 999999999 666778888876443
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-32 Score=304.63 Aligned_cols=180 Identities=17% Similarity=0.152 Sum_probs=139.3
Q ss_pred CceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH--HCCCcccCCCCCceEEe--cCCcEEEeccccch
Q 002843 303 GLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHH--TQGVTFLDLKPSSFKLL--QSNQVKYIGPIIQK 377 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~aL~yLH--s~gIIHRDLKPsNILL~--~~~~vKLiDFGlar 377 (874)
.+++||||+ ++|.+++.... ..+++..++.|+.||+.||.||| ..|||||||||+|||++ .++.+||+|||+++
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 367999997 49999998753 36999999999999999999999 47999999999999995 46789999999986
Q ss_pred hccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCC
Q 002843 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (874)
Q Consensus 378 ~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~ 457 (874)
....
T Consensus 210 ~~~~---------------------------------------------------------------------------- 213 (382)
T 2vx3_A 210 QLGQ---------------------------------------------------------------------------- 213 (382)
T ss_dssp ETTC----------------------------------------------------------------------------
T ss_pred eccc----------------------------------------------------------------------------
Confidence 3220
Q ss_pred CcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--
Q 002843 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL-- 535 (874)
Q Consensus 458 ~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~-- 535 (874)
.....+||+.|+|||++.+..|+.++|||||||+||||++|..||...
T Consensus 214 ------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 214 ------------------------------RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp ------------------------------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ------------------------------ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 002457889999999999999999999999999999999999998421
Q ss_pred HHHHHHhhc--CCC------------------C------------------CCCC------------------C------
Q 002843 536 AAAMSDLRD--RIL------------------P------------------PSFL------------------S------ 553 (874)
Q Consensus 536 ~~~~~~l~~--~~l------------------p------------------p~~~------------------~------ 553 (874)
...+..+.. +.. + +... .
T Consensus 264 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 343 (382)
T 2vx3_A 264 VDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTV 343 (382)
T ss_dssp HHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCH
T ss_pred HHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccc
Confidence 111111111 000 0 0000 0
Q ss_pred -CCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 554 -ENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 554 -~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
..+.+.+||.+||++||++|||+.|+|+||||+...
T Consensus 344 ~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~ 380 (382)
T 2vx3_A 344 ADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA 380 (382)
T ss_dssp HHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred hhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence 003578999999999999999999999999998643
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=289.80 Aligned_cols=209 Identities=14% Similarity=0.112 Sum_probs=162.3
Q ss_pred HHHHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC-----------
Q 002843 257 ALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH----------- 324 (874)
Q Consensus 257 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~----------- 324 (874)
.....+...+... .||+++.+......++. .+++||||+||+|.+++.....
T Consensus 71 ~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 134 (313)
T 1t46_A 71 EALMSELKVLSYLGNHMNIVNLLGACTIGGP----------------TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 134 (313)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEECSSSS----------------CEEEEECCTTEEHHHHHHHTTTTC---------
T ss_pred HHHHHHHHHHhhcccCCCeeeEEEEEecCCC----------------cEEEEecCCCCCHHHHHHhcccccccccccccc
Confidence 3444555566666 89999998877553322 2579999999999999987542
Q ss_pred ------CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcc
Q 002843 325 ------KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRR 398 (874)
Q Consensus 325 ------~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r 398 (874)
.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 135 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------- 200 (313)
T 1t46_A 135 MEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN-------------- 200 (313)
T ss_dssp -----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT--------------
T ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccccccccccccc--------------
Confidence 489999999999999999999999999999999999999999999999999874330000
Q ss_pred cchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcc
Q 002843 399 SAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLV 478 (874)
Q Consensus 399 ~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~ 478 (874)
T Consensus 201 -------------------------------------------------------------------------------- 200 (313)
T 1t46_A 201 -------------------------------------------------------------------------------- 200 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH---HHHHHHhhcCCCCCCCCCC
Q 002843 479 SNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL---AAAMSDLRDRILPPSFLSE 554 (874)
Q Consensus 479 ~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~---~~~~~~l~~~~lpp~~~~~ 554 (874)
........||+.|+|||++.+..++.++|||||||++|||++ |..||... ......+.....+......
T Consensus 201 -------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (313)
T 1t46_A 201 -------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA 273 (313)
T ss_dssp -------SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTS
T ss_pred -------ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccC
Confidence 000023457889999999998899999999999999999998 88887431 2223333333333333445
Q ss_pred CHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 555 NPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 555 ~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.+.+.+|+.+||++||.+|||+.|++++
T Consensus 274 ~~~l~~li~~~l~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 274 PAEMYDIMKTCWDADPLKRPTFKQIVQL 301 (313)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 6789999999999999999999999875
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=295.08 Aligned_cols=210 Identities=14% Similarity=0.021 Sum_probs=163.3
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYI 334 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I 334 (874)
.......+..++....||+++.++.....+. .+++|||+.+|+|.+++......+++.+++.|
T Consensus 60 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----------------~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i 122 (327)
T 3lzb_A 60 ANKEILDEAYVMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 122 (327)
T ss_dssp CHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-----------------EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-----------------ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHH
Confidence 4445566777888889999998887655222 24689999999999999886668999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 123 ~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~------------------------------ 172 (327)
T 3lzb_A 123 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK------------------------------ 172 (327)
T ss_dssp HHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC---------------------------------------
T ss_pred HHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc------------------------------
Confidence 99999999999999999999999999999999999999999874331000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
........|
T Consensus 173 -----------------------------------------------------------------------~~~~~~~~~ 181 (327)
T 3lzb_A 173 -----------------------------------------------------------------------EYHAEGGKV 181 (327)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred -----------------------------------------------------------------------cccccCCCc
Confidence 000023456
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
|+.|+|||++.+..|+.++|||||||++|||++ |..||... ......+.....++......+.+.+||.+||+.||.
T Consensus 182 t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~ 261 (327)
T 3lzb_A 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDAD 261 (327)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGG
T ss_pred cccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChh
Confidence 789999999999999999999999999999999 99888532 122333444444444455667899999999999999
Q ss_pred CCCChhHHhhh
Q 002843 572 SRPTTREILQS 582 (874)
Q Consensus 572 ~RPTa~EiL~h 582 (874)
+||++.|+++.
T Consensus 262 ~Rps~~ell~~ 272 (327)
T 3lzb_A 262 SRPKFRELIIE 272 (327)
T ss_dssp GSCCHHHHHHH
T ss_pred HCcCHHHHHHH
Confidence 99999999863
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-32 Score=290.56 Aligned_cols=209 Identities=16% Similarity=0.102 Sum_probs=165.2
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-------------
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------------- 323 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~------------- 323 (874)
.....+..++....||+++.++.....++. .+++||||+|++|.+++....
T Consensus 71 ~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 134 (314)
T 2ivs_A 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGP----------------LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134 (314)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEEEECSSSS----------------CEEEEECCTTCBHHHHHHHTTTSTTEEC------
T ss_pred HHHHHHHHHHhhCCCCceeeEEEEEecCCc----------------eEEEEeecCCCCHHHHHHHHhhccCCcccccccc
Confidence 345566677888899999998876543332 256999999999999998753
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhh
Q 002843 324 ----------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENY 393 (874)
Q Consensus 324 ----------~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~ 393 (874)
..+++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~--------- 205 (314)
T 2ivs_A 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS--------- 205 (314)
T ss_dssp ----------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSC---------
T ss_pred cccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEcccccccccccccc---------
Confidence 1389999999999999999999999999999999999999999999999999874330000
Q ss_pred hhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCC
Q 002843 394 RLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKS 473 (874)
Q Consensus 394 ~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s 473 (874)
T Consensus 206 -------------------------------------------------------------------------------- 205 (314)
T 2ivs_A 206 -------------------------------------------------------------------------------- 205 (314)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCC
Q 002843 474 SSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPS 550 (874)
Q Consensus 474 ~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~ 550 (874)
........+|+.|+|||++.+..++.++|||||||++|||++ |..||... ......+.....++.
T Consensus 206 ------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~ 273 (314)
T 2ivs_A 206 ------------YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMER 273 (314)
T ss_dssp ------------EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCC
T ss_pred ------------ceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCC
Confidence 000023456789999999998889999999999999999999 88887432 222334444444444
Q ss_pred CCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 551 ~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.....+.+.+|+.+||+.||.+||++.+++++
T Consensus 274 ~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 274 PDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 45566889999999999999999999999876
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-32 Score=303.75 Aligned_cols=208 Identities=16% Similarity=0.119 Sum_probs=162.9
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.++.....+.. .+++||||+||+|.+++...+..+++.+++.++.|
T Consensus 158 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~q 221 (377)
T 3cbl_A 158 KFLQEARILKQYSHPNIVRLIGVCTQKQP----------------IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGD 221 (377)
T ss_dssp TTTHHHHHHTTCCCTTBCCEEEEECSSSS----------------CEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEEEEEEecCCC----------------cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHH
Confidence 34556677888899999998876543322 25799999999999999876557999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++||+||||||+|||++.++.+||+|||+++...+...
T Consensus 222 i~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~--------------------------------- 268 (377)
T 3cbl_A 222 AAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY--------------------------------- 268 (377)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE---------------------------------
T ss_pred HHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce---------------------------------
Confidence 99999999999999999999999999999999999999874220000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
. .......+++.
T Consensus 269 ------------------------~--------------------------------------------~~~~~~~~~~~ 280 (377)
T 3cbl_A 269 ------------------------A--------------------------------------------ASGGLRQVPVK 280 (377)
T ss_dssp ------------------------E--------------------------------------------CCSSCCEEEGG
T ss_pred ------------------------e--------------------------------------------ecCCCCCCCcC
Confidence 0 00012345678
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
|+|||++.++.++.++|||||||+||||++ |..|+... ......+.....++......+.+.+||.+||+.||++||
T Consensus 281 y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 360 (377)
T 3cbl_A 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRP 360 (377)
T ss_dssp GSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred cCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCc
Confidence 999999998889999999999999999998 88887432 222333444333333334557789999999999999999
Q ss_pred ChhHHhhh
Q 002843 575 TTREILQS 582 (874)
Q Consensus 575 Ta~EiL~h 582 (874)
|+.++++.
T Consensus 361 s~~~i~~~ 368 (377)
T 3cbl_A 361 SFSTIYQE 368 (377)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999753
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=287.35 Aligned_cols=212 Identities=14% Similarity=0.081 Sum_probs=161.7
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++.....+... .+++||||+|++|.+++......+++.+++.|+.
T Consensus 71 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~---------------~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ 135 (298)
T 3f66_A 71 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGS---------------PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 135 (298)
T ss_dssp HHHHHHHHHHHTCCCTTBCCCCEEECCSSSC---------------CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc---------------eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHH
Confidence 4455666788888999999887763322221 2579999999999999987666799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 136 ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~-------------------------------- 183 (298)
T 3f66_A 136 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY-------------------------------- 183 (298)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG--------------------------------
T ss_pred HHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccch--------------------------------
Confidence 999999999999999999999999999999999999999874331000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
..........||+
T Consensus 184 -------------------------------------------------------------------~~~~~~~~~~~~~ 196 (298)
T 3f66_A 184 -------------------------------------------------------------------YSVHNKTGAKLPV 196 (298)
T ss_dssp -------------------------------------------------------------------CBC-----CCBCG
T ss_pred -------------------------------------------------------------------hccccccCCCCCc
Confidence 0000013446788
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||.+.+..++.++|||||||++|||++ +.+|+.... .....+.....+.......+.+.+|+.+||++||.+|
T Consensus 197 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 276 (298)
T 3f66_A 197 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMR 276 (298)
T ss_dssp GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred cccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhC
Confidence 9999999999899999999999999999999 566653211 1122233333333333345779999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
||+.|+++.
T Consensus 277 ps~~ell~~ 285 (298)
T 3f66_A 277 PSFSELVSR 285 (298)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 999999764
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-32 Score=308.79 Aligned_cols=198 Identities=17% Similarity=0.148 Sum_probs=150.3
Q ss_pred CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC
Q 002843 270 ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQ 348 (874)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~aL~yLHs~ 348 (874)
.+++++.++........ .+++||||. ++|.+++.... ..+++..++.|+.||+.||+|||++
T Consensus 157 ~~~~iv~~~~~~~~~~~----------------~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 219 (429)
T 3kvw_A 157 NTMNVIHMLENFTFRNH----------------ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219 (429)
T ss_dssp SCSCBCCEEEEEEETTE----------------EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEEeecccCCe----------------EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 55677777666543332 257999997 69999998754 3599999999999999999999999
Q ss_pred CCcccCCCCCceEEecCCc--EEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccc
Q 002843 349 GVTFLDLKPSSFKLLQSNQ--VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRW 426 (874)
Q Consensus 349 gIIHRDLKPsNILL~~~~~--vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~ 426 (874)
|||||||||+||||+.++. +||+|||+++....
T Consensus 220 ~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~--------------------------------------------- 254 (429)
T 3kvw_A 220 RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ--------------------------------------------- 254 (429)
T ss_dssp TEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC---------------------------------------------
T ss_pred CeecCCCCHHHeEEccCCCcceEEeecccceecCC---------------------------------------------
Confidence 9999999999999999887 99999998752210
Q ss_pred cccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC
Q 002843 427 WSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG 506 (874)
Q Consensus 427 ~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g 506 (874)
.....+||+.|+|||++.+
T Consensus 255 -------------------------------------------------------------~~~~~~gt~~y~aPE~~~~ 273 (429)
T 3kvw_A 255 -------------------------------------------------------------RVYTYIQSRFYRAPEVILG 273 (429)
T ss_dssp -------------------------------------------------------------CCCSSCSCGGGCCHHHHHT
T ss_pred -------------------------------------------------------------cccccCCCCCccChHHHhC
Confidence 0024578999999999999
Q ss_pred CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc--CC--------------------CC--------------
Q 002843 507 GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD--RI--------------------LP-------------- 548 (874)
Q Consensus 507 ~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~--~~--------------------lp-------------- 548 (874)
..|+.++|||||||+||||++|.+||.... ..+..+.. +. .|
T Consensus 274 ~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (429)
T 3kvw_A 274 ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVV 353 (429)
T ss_dssp BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CE
T ss_pred CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCccccccccccccccc
Confidence 899999999999999999999998873211 11111110 00 00
Q ss_pred --------------CCC--------CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 549 --------------PSF--------LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 549 --------------p~~--------~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
+.. ....+.+.+||.+||++||++|||+.|+|+||||+....
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~ 417 (429)
T 3kvw_A 354 LNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417 (429)
T ss_dssp ECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC----
T ss_pred ccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCC
Confidence 000 012466889999999999999999999999999987543
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-32 Score=306.65 Aligned_cols=215 Identities=16% Similarity=0.132 Sum_probs=158.8
Q ss_pred HHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHHHHHHH
Q 002843 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQI 338 (874)
Q Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I~~QI 338 (874)
+..++....||+++.+.......+... .. .-.+++||||++ +|.+++.. ....+++..++.|+.||
T Consensus 97 E~~il~~l~hpniv~l~~~~~~~~~~~-------~~---~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi 165 (420)
T 1j1b_A 97 ELQIMRKLDHCNIVRLRYFFYSSGEKK-------DE---VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQL 165 (420)
T ss_dssp HHHHHHTCCCTTBCCEEEEEEEEETTT-------TE---EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCccceeeEEeccCCCC-------cc---eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence 556677888999998876644222100 00 002579999995 77776653 34479999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecC-CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQS-NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~-~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
+.||+|||++||+||||||+||||+.+ +.+||+|||+++.+...
T Consensus 166 ~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~----------------------------------- 210 (420)
T 1j1b_A 166 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----------------------------------- 210 (420)
T ss_dssp HHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT-----------------------------------
T ss_pred HHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccC-----------------------------------
Confidence 999999999999999999999999965 56899999998743200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
......+||++
T Consensus 211 ---------------------------------------------------------------------~~~~~~~~t~~ 221 (420)
T 1j1b_A 211 ---------------------------------------------------------------------EPNVSYICSRY 221 (420)
T ss_dssp ---------------------------------------------------------------------CCCCSCCSCTT
T ss_pred ---------------------------------------------------------------------CCceeeeeCCC
Confidence 00024578999
Q ss_pred ccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhh--------------cC---CCCCC------
Q 002843 498 YASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLR--------------DR---ILPPS------ 550 (874)
Q Consensus 498 Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~--------------~~---~lpp~------ 550 (874)
|+|||++.+. .|+.++||||||||||||++|..||... ......+. .. ...+.
T Consensus 222 y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~ 301 (420)
T 1j1b_A 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPW 301 (420)
T ss_dssp SCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCH
T ss_pred cCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCH
Confidence 9999999875 6999999999999999999999988321 11111111 00 00011
Q ss_pred ---C-CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 551 ---F-LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 551 ---~-~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
+ ....+.+.+||.+||.+||.+|||+.|+|+||||+.+...
T Consensus 302 ~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 346 (420)
T 1j1b_A 302 TKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDP 346 (420)
T ss_dssp HHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCT
T ss_pred HHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccccc
Confidence 1 1234678999999999999999999999999999887654
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=293.32 Aligned_cols=210 Identities=13% Similarity=0.104 Sum_probs=162.9
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+......... .+++||||+|++|.+++......+++.+++.|+.
T Consensus 91 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ 154 (333)
T 1mqb_A 91 VDFLGEAGIMGQFSHHNIIRLEGVISKYKP----------------MMIITEYMENGALDKFLREKDGEFSVLQLVGMLR 154 (333)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEECSSSS----------------EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEecCCC----------------cEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHH
Confidence 345566677888899999988776543222 2579999999999999987655899999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 155 qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------- 202 (333)
T 1mqb_A 155 GIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE-------------------------------- 202 (333)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------------------------------
T ss_pred HHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccc--------------------------------
Confidence 999999999999999999999999999999999999999874331000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
. ........+|+
T Consensus 203 ------------------------~--------------------------------------------~~~~~~~~~~~ 214 (333)
T 1mqb_A 203 ------------------------A--------------------------------------------TYTTSGGKIPI 214 (333)
T ss_dssp ----------------------------------------------------------------------------CCCG
T ss_pred ------------------------c--------------------------------------------ccccCCCCccc
Confidence 0 00002335678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||++|||++ |..||.. ....+..+.....++......+.+.+|+.+||+.||.+|
T Consensus 215 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 294 (333)
T 1mqb_A 215 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARR 294 (333)
T ss_dssp GGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTS
T ss_pred cccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhC
Confidence 9999999998899999999999999999998 9888842 223344555554444445566789999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
|++.+++++
T Consensus 295 ps~~~l~~~ 303 (333)
T 1mqb_A 295 PKFADIVSI 303 (333)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 999999875
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=283.13 Aligned_cols=219 Identities=24% Similarity=0.230 Sum_probs=167.4
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIV 339 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl 339 (874)
.+...+....||+++.+.....................-....+++||||+|++|.+++... +..+++..++.|+.||+
T Consensus 53 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~ 132 (284)
T 2a19_B 53 REVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132 (284)
T ss_dssp HHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHH
Confidence 44556677789999988765432111100000000000011146899999999999999754 34799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~ 419 (874)
.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 133 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------- 175 (284)
T 2a19_B 133 KGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND------------------------------------- 175 (284)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCC-------------------------------------
T ss_pred HHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheecccc-------------------------------------
Confidence 9999999999999999999999999999999999987643200
Q ss_pred ccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccccc
Q 002843 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (874)
Q Consensus 420 ~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~ 499 (874)
.......||+.|+
T Consensus 176 -------------------------------------------------------------------~~~~~~~~~~~y~ 188 (284)
T 2a19_B 176 -------------------------------------------------------------------GKRTRSKGTLRYM 188 (284)
T ss_dssp -------------------------------------------------------------------SCCCCCCSCCTTS
T ss_pred -------------------------------------------------------------------ccccccCCccccc
Confidence 0002346889999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHH
Q 002843 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (874)
Q Consensus 500 APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~Ei 579 (874)
|||++.+..++.++|||||||++|||++|..|+.........+....+++. ..+.+.+||.+||+.||.+|||+.|+
T Consensus 189 aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~e~ 265 (284)
T 2a19_B 189 SPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDI---FDKKEKTLLQKLLSKKPEDRPNTSEI 265 (284)
T ss_dssp CHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhccccccc---CCHHHHHHHHHHccCChhhCcCHHHH
Confidence 999999988999999999999999999999998776666666666555433 35678999999999999999999999
Q ss_pred hhhHHHH
Q 002843 580 LQSEVTN 586 (874)
Q Consensus 580 L~hp~~~ 586 (874)
+++.+.-
T Consensus 266 l~~l~~~ 272 (284)
T 2a19_B 266 LRTLTVW 272 (284)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9997643
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=297.33 Aligned_cols=219 Identities=15% Similarity=0.197 Sum_probs=162.0
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+............ ...+++||||+ ++|.+++......+++.+++.|+.
T Consensus 74 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~-----------~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~ 141 (362)
T 3pg1_A 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM-----------HKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMY 141 (362)
T ss_dssp HHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC-----------CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcCccceeeeEEeccCCCc-----------ceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHH
Confidence 345566677888899999998887553222110 11368999998 699999987666899999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 142 qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~---------------------------------- 187 (362)
T 3pg1_A 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD---------------------------------- 187 (362)
T ss_dssp HHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC-----------------------------------------
T ss_pred HHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCcccccccc----------------------------------
Confidence 9999999999999999999999999999999999999998632200
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......||+
T Consensus 188 ----------------------------------------------------------------------~~~~~~~~t~ 197 (362)
T 3pg1_A 188 ----------------------------------------------------------------------ANKTHYVTHR 197 (362)
T ss_dssp ------------------------------------------------------------------------------CG
T ss_pred ----------------------------------------------------------------------cccceecccc
Confidence 0002457889
Q ss_pred cccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc-----------------------CC---C
Q 002843 497 WYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD-----------------------RI---L 547 (874)
Q Consensus 497 ~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~-----------------------~~---l 547 (874)
+|+|||++.+ ..++.++|||||||++|+|++|..||.... ..+..+.. .. .
T Consensus 198 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (362)
T 3pg1_A 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNV 277 (362)
T ss_dssp GGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCC
T ss_pred eecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccC
Confidence 9999999987 668999999999999999999998873211 11111110 00 0
Q ss_pred CC-----CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 548 PP-----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 548 pp-----~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
+. ......+.+.+||.+||++||.+|||+.|+|+||||+.+...
T Consensus 278 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~ 326 (362)
T 3pg1_A 278 PARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDP 326 (362)
T ss_dssp CCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCCG
T ss_pred ChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccCc
Confidence 10 112345678999999999999999999999999999987543
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=289.59 Aligned_cols=229 Identities=17% Similarity=0.122 Sum_probs=165.3
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCcccc--CCCceEeeccCCCCHHHHHHhCCCCCCHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW--IGGLRQGSSDHGVNLREWLNARGHKGKRIECL 332 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~ 332 (874)
.......+...+....||+++.++......+.... ...+.+. ...+++|||++ ++|.+++... .+++.+++
T Consensus 51 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~----~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~ 123 (320)
T 2i6l_A 51 SVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT----DDVGSLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHAR 123 (320)
T ss_dssp HHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC----C----CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc----cccccccccCceeEEeeccC-CCHHHHhhcC--CccHHHHH
Confidence 33445667778888899999998876543332111 0001111 12478999998 5999999764 69999999
Q ss_pred HHHHHHHHHHHHHHHCCCcccCCCCCceEEe-cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchh
Q 002843 333 YIFRQIVALVDYHHTQGVTFLDLKPSSFKLL-QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (874)
Q Consensus 333 ~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~-~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~ 411 (874)
.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 124 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~--------------------------- 176 (320)
T 2i6l_A 124 LFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYS--------------------------- 176 (320)
T ss_dssp HHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------------------------------
T ss_pred HHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcc---------------------------
Confidence 9999999999999999999999999999998 467899999999874320000
Q ss_pred hhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccc
Q 002843 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (874)
Q Consensus 412 ~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~ 491 (874)
.......
T Consensus 177 -------------------------------------------------------------------------~~~~~~~ 183 (320)
T 2i6l_A 177 -------------------------------------------------------------------------HKGHLSE 183 (320)
T ss_dssp ----------------------------------------------------------------------------CCCG
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 0000134
Q ss_pred ccccccccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCC----------------------
Q 002843 492 QLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRI---------------------- 546 (874)
Q Consensus 492 ~~GT~~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~---------------------- 546 (874)
..+|++|+|||++.+ ..++.++|||||||++|||++|..||.... ..+..+....
T Consensus 184 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (320)
T 2i6l_A 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRND 263 (320)
T ss_dssp GGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHH
T ss_pred ccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCccccccc
Confidence 567899999999876 568999999999999999999998873211 1111111100
Q ss_pred -CCC------CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 547 -LPP------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 547 -lpp------~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
..+ .....++.+.+||.+||+.||.+|||+.|+|+||||+....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 314 (320)
T 2i6l_A 264 MTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSF 314 (320)
T ss_dssp TTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC
T ss_pred ccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccC
Confidence 000 11235677999999999999999999999999999986543
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=284.72 Aligned_cols=208 Identities=19% Similarity=0.218 Sum_probs=159.2
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...+....||+++.+.......+. .+++||||+|++|.+++...+ .+++.+++.++.||
T Consensus 58 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi 120 (276)
T 2h6d_A 58 IKREIQNLKLFRHPHIIKLYQVISTPTD----------------FFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQI 120 (276)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEECSSE----------------EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCEeEEEEEEecCCe----------------EEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHH
Confidence 3445566777889999998877553332 256999999999999998765 69999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 121 ~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~------------------------------------ 164 (276)
T 2h6d_A 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG------------------------------------ 164 (276)
T ss_dssp HHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------------------------------
T ss_pred HHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC------------------------------------
Confidence 99999999999999999999999999999999999988632200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......||+.|
T Consensus 165 --------------------------------------------------------------------~~~~~~~~~~~y 176 (276)
T 2h6d_A 165 --------------------------------------------------------------------EFLRTSCGSPNY 176 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------cceecccCCccc
Confidence 000234678899
Q ss_pred cCcccccCCCC-CCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 499 ASPEELSGGVC-TTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 499 ~APEvl~g~~y-s~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
+|||++.+..+ +.++|||||||++|+|++|..||.. .......+.....+ ......+.+.+||.+||+.||.+|||
T Consensus 177 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps 255 (276)
T 2h6d_A 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFY-IPEYLNRSVATLLMHMLQVDPLKRAT 255 (276)
T ss_dssp CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred cCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccc-CchhcCHHHHHHHHHHccCChhhCCC
Confidence 99999998765 6899999999999999999988742 22233344433221 11233577899999999999999999
Q ss_pred hhHHhhhHHHHhh
Q 002843 576 TREILQSEVTNEF 588 (874)
Q Consensus 576 a~EiL~hp~~~~~ 588 (874)
+.|+|+||||+..
T Consensus 256 ~~~~l~h~~~~~~ 268 (276)
T 2h6d_A 256 IKDIREHEWFKQD 268 (276)
T ss_dssp HHHHHHSHHHHTT
T ss_pred HHHHHhChhhccC
Confidence 9999999999853
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=291.51 Aligned_cols=215 Identities=13% Similarity=0.073 Sum_probs=167.7
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC------CCCCHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------HKGKRI 329 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~------~~lse~ 329 (874)
......+..++....||+++.++.....+.. .+++||||+|++|.+++.... ..+++.
T Consensus 77 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 140 (327)
T 2yfx_A 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLP----------------RFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140 (327)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEECSSSS----------------CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHH
T ss_pred HHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC----------------cEEEEecCCCCcHHHHHHhhcccccccccccHH
Confidence 3345556677788899999998877553322 257999999999999998753 259999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC---CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhcc
Q 002843 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS---NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFT 406 (874)
Q Consensus 330 e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~---~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg 406 (874)
+++.++.||+.||.|||++||+||||||+|||++.+ ..+||+|||+++.......
T Consensus 141 ~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~---------------------- 198 (327)
T 2yfx_A 141 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY---------------------- 198 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC-------------------------
T ss_pred HHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccc----------------------
Confidence 999999999999999999999999999999999844 4699999999874431000
Q ss_pred ccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccc
Q 002843 407 TGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQS 486 (874)
Q Consensus 407 ~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~ 486 (874)
.
T Consensus 199 -------------------------------------------------------------------------------~ 199 (327)
T 2yfx_A 199 -------------------------------------------------------------------------------Y 199 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred cccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHH
Q 002843 487 TSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCL 563 (874)
Q Consensus 487 ~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~ 563 (874)
.......||+.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....+.......+.+.+||.
T Consensus 200 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 279 (327)
T 2yfx_A 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMT 279 (327)
T ss_dssp --CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred ccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence 00024467889999999998899999999999999999998 8888743 22234444444333334455678999999
Q ss_pred HccccCCCCCCChhHHhhhHHHHh
Q 002843 564 WQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 564 ~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
+||+.||.+||++.+++++.|+-.
T Consensus 280 ~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 280 QCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhcCChhhCcCHHHHHHHHHHHh
Confidence 999999999999999999987653
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-32 Score=297.02 Aligned_cols=253 Identities=13% Similarity=0.096 Sum_probs=177.2
Q ss_pred cccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCC
Q 002843 195 MLSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPK 273 (874)
Q Consensus 195 ~~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~ 273 (874)
.+..+.++. +.|.+++| |.||+|... +...+.+.+... .........+...+....||+
T Consensus 20 ~~~~~~y~~~~~lg~G~~------------g~Vy~~~~~-------~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpn 79 (322)
T 3soc_A 20 YFQSMPLQLLEVKARGRF------------GCVWKAQLL-------NEYVAVKIFPIQ-DKQSWQNEYEVYSLPGMKHEN 79 (322)
T ss_dssp EETTEEEEEEEEEECSTT------------CEEEEEEET-------TEEEEEEEECGG-GHHHHHHHHHHHTSTTCCCTT
T ss_pred ccchhhchhhheecccCc------------eEEEEEEEC-------CCEEEEEEeecC-chHHHHHHHHHHHHhcCCCCC
Confidence 344445544 77777655 567777532 122222222222 122223334556677888999
Q ss_pred CceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-----
Q 002843 274 PVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ----- 348 (874)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~----- 348 (874)
++.++.......... ...+++||||+||+|.++++.. .+++.+++.|+.||+.||+|||+.
T Consensus 80 iv~~~~~~~~~~~~~------------~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~ 145 (322)
T 3soc_A 80 ILQFIGAEKRGTSVD------------VDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLK 145 (322)
T ss_dssp BCCEEEEEEEECSSS------------EEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEET
T ss_pred chhhcceeccCCCCC------------ceEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 999988765433211 0126799999999999999876 599999999999999999999999
Q ss_pred -----CCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccc
Q 002843 349 -----GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (874)
Q Consensus 349 -----gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s 423 (874)
||+||||||+|||++.++.+||+|||+++.......
T Consensus 146 ~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~--------------------------------------- 186 (322)
T 3soc_A 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS--------------------------------------- 186 (322)
T ss_dssp TEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSC---------------------------------------
T ss_pred cccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccC---------------------------------------
Confidence 999999999999999999999999999874330000
Q ss_pred ccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCccc
Q 002843 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (874)
Q Consensus 424 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEv 503 (874)
........||+.|+|||+
T Consensus 187 --------------------------------------------------------------~~~~~~~~gt~~y~aPE~ 204 (322)
T 3soc_A 187 --------------------------------------------------------------AGDTHGQVGTRRYMAPEV 204 (322)
T ss_dssp --------------------------------------------------------------CCCCTTCCCCGGGCCHHH
T ss_pred --------------------------------------------------------------ccccccCccCccccCHhh
Confidence 000134578999999999
Q ss_pred ccCC-----CCCCccchhHHHHHHHHhcCCCCchHH------------------HHHHHHHhhcCCCCCCCCCC------
Q 002843 504 LSGG-----VCTTSSNIYSLGVLFFELFGRFDSERA------------------LAAAMSDLRDRILPPSFLSE------ 554 (874)
Q Consensus 504 l~g~-----~ys~kSDIwSLGVIL~ELltG~~p~~~------------------~~~~~~~l~~~~lpp~~~~~------ 554 (874)
+.+. .++.++|||||||++|||++|..||.. .......+......+.+...
T Consensus 205 ~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (322)
T 3soc_A 205 LEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAG 284 (322)
T ss_dssp HTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHH
T ss_pred cccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccch
Confidence 9873 467789999999999999999777631 11122222233333332221
Q ss_pred CHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 555 NPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 555 ~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.+.+.+||.+||+.||++|||+.|+++.
T Consensus 285 ~~~l~~li~~cl~~dP~~Rps~~ell~~ 312 (322)
T 3soc_A 285 MAMLCETIEECWDHDAEARLSAGCVGER 312 (322)
T ss_dssp HHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 1348899999999999999999999764
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=284.57 Aligned_cols=212 Identities=16% Similarity=0.079 Sum_probs=163.8
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++......... .+++|||+.|++|.+++......+++.+++.|+.
T Consensus 67 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~---------------~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~ 131 (298)
T 3pls_A 67 EAFLREGLLMRGLNHPNVLALIGIMLPPEGL---------------PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL 131 (298)
T ss_dssp HHHHHHHHHHHTCCCTTBCCCCEEECCSSSC---------------CEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCeeeEEEEEecCCCC---------------cEEEEecccCCCHHHHHhccccCCCHHHHHHHHH
Confidence 3455666788888999999888765432221 1579999999999999988666899999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 132 qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~-------------------------------- 179 (298)
T 3pls_A 132 QVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY-------------------------------- 179 (298)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG--------------------------------
T ss_pred HHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc--------------------------------
Confidence 999999999999999999999999999999999999999874331000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
. .........+|+
T Consensus 180 ------------------------~-------------------------------------------~~~~~~~~~~~~ 192 (298)
T 3pls_A 180 ------------------------Y-------------------------------------------SVQQHRHARLPV 192 (298)
T ss_dssp ------------------------G-------------------------------------------CSCCSSCTTCGG
T ss_pred ------------------------c-------------------------------------------ccccCcCCCCCc
Confidence 0 000012446788
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCC-CCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGR-FDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG-~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||.+.+..++.++|||||||++|+|++| .+|+.. .......+.....++......+.+.+|+.+||+.||.+|
T Consensus 193 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 272 (298)
T 3pls_A 193 KWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVR 272 (298)
T ss_dssp GGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred cccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhC
Confidence 99999999998999999999999999999995 444422 111233333333334444456789999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
||+.++++.
T Consensus 273 ps~~~ll~~ 281 (298)
T 3pls_A 273 PTFRVLVGE 281 (298)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 999999764
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=300.44 Aligned_cols=226 Identities=15% Similarity=0.097 Sum_probs=160.9
Q ss_pred HHhHHhhcCCCCCceeccceeecCcccC----------------------CcCCCCCccccCCCceEeeccCCCCHHHHH
Q 002843 262 GAMMVASNASPKPVGVGTAVVSNGSLDL----------------------GARTGVPASCWIGGLRQGSSDHGVNLREWL 319 (874)
Q Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L 319 (874)
+..++....||+++.++......+.... +...-+......-.+++||||+ ++|.+++
T Consensus 50 E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l 128 (383)
T 3eb0_A 50 ELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVL 128 (383)
T ss_dssp HHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCS-EEHHHHH
T ss_pred HHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHH
Confidence 5566778899999998877543332100 0000000000111468999999 5888877
Q ss_pred Hh---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEe-cCCcEEEeccccchhccccccCCCCcchhhhh
Q 002843 320 NA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL-QSNQVKYIGPIIQKETLESASLDIPHSENYRL 395 (874)
Q Consensus 320 ~~---~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~-~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~ 395 (874)
.. .+..+++..++.|+.||+.||+|||++||+||||||+|||++ .++.+||+|||+++.....
T Consensus 129 ~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~------------- 195 (383)
T 3eb0_A 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS------------- 195 (383)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT-------------
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC-------------
Confidence 53 344799999999999999999999999999999999999998 5789999999998743200
Q ss_pred hcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCC
Q 002843 396 RRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSS 475 (874)
Q Consensus 396 r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~ 475 (874)
T Consensus 196 -------------------------------------------------------------------------------- 195 (383)
T 3eb0_A 196 -------------------------------------------------------------------------------- 195 (383)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccccccccccccccccccccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc--------
Q 002843 476 PLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD-------- 544 (874)
Q Consensus 476 p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~-------- 544 (874)
.......||+.|+|||++.+.. |+.++|||||||++|||++|..||.... ..+..+..
T Consensus 196 -----------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~ 264 (383)
T 3eb0_A 196 -----------EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKE 264 (383)
T ss_dssp -----------SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred -----------CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 0002456789999999998754 8999999999999999999999883211 11111110
Q ss_pred ----------CCCCCC---------C-CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 545 ----------RILPPS---------F-LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 545 ----------~~lpp~---------~-~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
....+. + ...++.+.+||.+||++||.+|||+.|+|+||||+.++...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~ 332 (383)
T 3eb0_A 265 QMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSY 332 (383)
T ss_dssp HHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHHC-
T ss_pred HHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHHhhc
Confidence 000011 1 12346688999999999999999999999999999887643
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-32 Score=295.56 Aligned_cols=209 Identities=18% Similarity=0.180 Sum_probs=162.8
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......+. .+++||||+|++|.+++.... .+++.+++.++.||
T Consensus 62 ~~~E~~~l~~l~h~~i~~~~~~~~~~~-----------------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi 123 (322)
T 2ycf_A 62 VETEIEILKKLNHPCIIKIKNFFDAED-----------------YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQM 123 (322)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEESSS-----------------EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCceEeeEEcCCc-----------------eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHH
Confidence 345566777889999998876543211 257999999999999998765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCc---EEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQ---VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~---vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
+.||+|||++||+||||||+|||++.++. +||+|||+++.....
T Consensus 124 ~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~--------------------------------- 170 (322)
T 2ycf_A 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET--------------------------------- 170 (322)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCC---------------------------------
T ss_pred HHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccc---------------------------------
Confidence 99999999999999999999999987664 999999998643200
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
.......||
T Consensus 171 -----------------------------------------------------------------------~~~~~~~gt 179 (322)
T 2ycf_A 171 -----------------------------------------------------------------------SLMRTLCGT 179 (322)
T ss_dssp -----------------------------------------------------------------------HHHHHHHSC
T ss_pred -----------------------------------------------------------------------cccccccCC
Confidence 000234688
Q ss_pred ccccCccccc---CCCCCCccchhHHHHHHHHhcCCCCchHHHH---HHHHHhhcCC---CCCCCCCCCHHHHHHHHHcc
Q 002843 496 KWYASPEELS---GGVCTTSSNIYSLGVLFFELFGRFDSERALA---AAMSDLRDRI---LPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 496 ~~Y~APEvl~---g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~~~l~~~~---lpp~~~~~~p~l~dLi~~cL 566 (874)
+.|+|||++. ...++.++|||||||++|+|++|..||.... .....+.... .+..+....+.+.+||.+||
T Consensus 180 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 259 (322)
T 2ycf_A 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL 259 (322)
T ss_dssp CTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHS
T ss_pred cCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHc
Confidence 9999999974 4568999999999999999999999984321 1122222222 12222345678899999999
Q ss_pred ccCCCCCCChhHHhhhHHHHhhH
Q 002843 567 HPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+.||.+||++.++|+||||+...
T Consensus 260 ~~dP~~Rps~~~~l~h~~~~~~~ 282 (322)
T 2ycf_A 260 VVDPKARFTTEEALRHPWLQDED 282 (322)
T ss_dssp CSSTTTSCCHHHHHTSGGGCCHH
T ss_pred ccCHhhCCCHHHHhhCcCcCCHH
Confidence 99999999999999999998643
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=292.53 Aligned_cols=208 Identities=18% Similarity=0.175 Sum_probs=145.7
Q ss_pred HhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh----CCCCCCHHHHHHHHHHH
Q 002843 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA----RGHKGKRIECLYIFRQI 338 (874)
Q Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~----~~~~lse~e~~~I~~QI 338 (874)
..+++...||+++.++.....++.. +++||||+| +|.+++.. ....+++..+..++.||
T Consensus 72 ~~~~~~~~h~niv~~~~~~~~~~~~----------------~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i 134 (327)
T 3aln_A 72 DVVMRSSDCPYIVQFYGALFREGDC----------------WICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLAT 134 (327)
T ss_dssp HHHHSSCCCTTBCCEEEEEECSSEE----------------EEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHH
T ss_pred HHHHHcCCCCcEeeeeeEEEeCCce----------------EEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHH
Confidence 3477888999999998876543332 469999995 89888864 23479999999999999
Q ss_pred HHHHHHHHHC-CCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 339 VALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 339 l~aL~yLHs~-gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
+.||.|||++ ||+||||||+|||++.++.+||+|||+++.....
T Consensus 135 ~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----------------------------------- 179 (327)
T 3aln_A 135 VKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS----------------------------------- 179 (327)
T ss_dssp HHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---------------------------------------
T ss_pred HHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc-----------------------------------
Confidence 9999999999 9999999999999999999999999998643200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......||+.
T Consensus 180 ---------------------------------------------------------------------~~~~~~~gt~~ 190 (327)
T 3aln_A 180 ---------------------------------------------------------------------IAKTRDAGCRP 190 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------------------------------------------cccccCCCCcc
Confidence 00023468899
Q ss_pred ccCcccc----cCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhc--CCCCCCC-----CCCCHHHHHHHHHcc
Q 002843 498 YASPEEL----SGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRD--RILPPSF-----LSENPKEAGFCLWQL 566 (874)
Q Consensus 498 Y~APEvl----~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~--~~lpp~~-----~~~~p~l~dLi~~cL 566 (874)
|+|||++ .+..++.++|||||||++|||++|..||.........+.. ...++.+ ....+.+.+|+.+||
T Consensus 191 y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 270 (327)
T 3aln_A 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCL 270 (327)
T ss_dssp ---------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHT
T ss_pred ccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHh
Confidence 9999999 4566899999999999999999999998643322222221 1111111 234578999999999
Q ss_pred ccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 567 HPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
+.||.+||++.++|+||||....+.
T Consensus 271 ~~dp~~Rps~~ell~hp~~~~~~~~ 295 (327)
T 3aln_A 271 TKDESKRPKYKELLKHPFILMYEER 295 (327)
T ss_dssp CSSGGGSCCHHHHTTSHHHHHHHHS
T ss_pred hCChhhCcCHHHHHhChHHHHhHhh
Confidence 9999999999999999999876543
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=301.38 Aligned_cols=215 Identities=13% Similarity=0.086 Sum_probs=158.4
Q ss_pred hhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHH
Q 002843 254 SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLY 333 (874)
Q Consensus 254 ~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~ 333 (874)
........+..++....||+++.++......... .+++||||+||+|.+++......+++.+++.
T Consensus 132 ~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~---------------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~ 196 (373)
T 3c1x_A 132 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS---------------PLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 196 (373)
T ss_dssp HHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSC---------------CEEEEECCTTCBHHHHHHCTTCCCBHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCC---------------eEEEEECCCCCCHHHHHhhcccCCCHHHHHH
Confidence 3445566777788888999999888764322211 2579999999999999988766799999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 197 i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~----------------------------- 247 (373)
T 3c1x_A 197 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF----------------------------- 247 (373)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------------------------------
T ss_pred HHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccc-----------------------------
Confidence 999999999999999999999999999999999999999999875431000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
. .........
T Consensus 248 ----------------------------~------------------------------------------~~~~~~~~~ 257 (373)
T 3c1x_A 248 ----------------------------D------------------------------------------SVHNKTGAK 257 (373)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------c------------------------------------------cccccCCCC
Confidence 0 000002345
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHHH--HHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCC
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERALA--AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~~--~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP 570 (874)
+|+.|+|||++.+..++.++|||||||++|||++ |.+||.... .....+.....+.......+.+.+||.+||+.||
T Consensus 258 ~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp 337 (373)
T 3c1x_A 258 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKA 337 (373)
T ss_dssp CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred CcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence 7789999999999899999999999999999999 677764311 1122333333333333455779999999999999
Q ss_pred CCCCChhHHhhh
Q 002843 571 LSRPTTREILQS 582 (874)
Q Consensus 571 ~~RPTa~EiL~h 582 (874)
.+||++.|++++
T Consensus 338 ~~RPs~~ell~~ 349 (373)
T 3c1x_A 338 EMRPSFSELVSR 349 (373)
T ss_dssp GGSCCHHHHHHH
T ss_pred hhCcCHHHHHHH
Confidence 999999999875
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-31 Score=284.23 Aligned_cols=212 Identities=16% Similarity=0.203 Sum_probs=167.4
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
......+...+....||+++.++........ .+++||||+|++|.+++.... .+++.+++.++
T Consensus 65 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~ 127 (287)
T 2wei_A 65 TSTILREVELLKKLDHPNIMKLFEILEDSSS----------------FYIVGELYTGGELFDEIIKRK-RFSEHDAARII 127 (287)
T ss_dssp HHHHHHHHHHHHTCCCTTBCCEEEEEECSSE----------------EEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCccEEEEEEeCCCe----------------EEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHH
Confidence 3445556677788899999988876543322 256999999999999997765 69999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecC---CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQS---NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~---~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
.||+.||.|||++||+||||||+|||++.+ +.+||+|||+++.....
T Consensus 128 ~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~------------------------------ 177 (287)
T 2wei_A 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN------------------------------ 177 (287)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC------------------------------
T ss_pred HHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC------------------------------
Confidence 999999999999999999999999999764 46999999988633200
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
......
T Consensus 178 --------------------------------------------------------------------------~~~~~~ 183 (287)
T 2wei_A 178 --------------------------------------------------------------------------TKMKDR 183 (287)
T ss_dssp --------------------------------------------------------------------------SSCSCH
T ss_pred --------------------------------------------------------------------------Cccccc
Confidence 000234
Q ss_pred cccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCC---CCCCCCCHHHHHHHHHccc
Q 002843 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILP---PSFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 493 ~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lp---p~~~~~~p~l~dLi~~cL~ 567 (874)
.||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .......+.....+ +.+...++.+.+||.+||.
T Consensus 184 ~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 262 (287)
T 2wei_A 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262 (287)
T ss_dssp HHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTC
T ss_pred cCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcc
Confidence 68899999999876 589999999999999999999988732 22233344443322 2234556789999999999
Q ss_pred cCCCCCCChhHHhhhHHHHhhH
Q 002843 568 PEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+||.+|||+.|+|+||||+...
T Consensus 263 ~dp~~Rps~~ell~hp~~~~~~ 284 (287)
T 2wei_A 263 FHPSLRITATQCLEHPWIQKYS 284 (287)
T ss_dssp SSGGGSCCHHHHHHSHHHHHHC
T ss_pred cChhhCcCHHHHhcCHHHhccc
Confidence 9999999999999999998754
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=296.11 Aligned_cols=216 Identities=15% Similarity=0.225 Sum_probs=163.5
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++......+.... ....+++||||. ++|.+++.. .+++.+++.|+.
T Consensus 86 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~----------~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~ 151 (371)
T 4exu_A 86 KRAYRELLLLKHMQHENVIGLLDVFTPASSLRN----------FYDFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVY 151 (371)
T ss_dssp HHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT----------CCCCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCchhhhhheeccCCccc----------ceeEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHH
Confidence 345566778888899999988877553332110 011268999998 689888743 499999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 152 qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~----------------------------------- 196 (371)
T 4exu_A 152 QMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA----------------------------------- 196 (371)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC----------------------------------------
T ss_pred HHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccccc-----------------------------------
Confidence 999999999999999999999999999999999999999863220
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.....+||+
T Consensus 197 -----------------------------------------------------------------------~~~~~~~t~ 205 (371)
T 4exu_A 197 -----------------------------------------------------------------------EMTGYVVTR 205 (371)
T ss_dssp --------------------------------------------------------------------------CTTCCC
T ss_pred -----------------------------------------------------------------------CcCCcccCc
Confidence 002346789
Q ss_pred cccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc--CC--------------------CCC--
Q 002843 497 WYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD--RI--------------------LPP-- 549 (874)
Q Consensus 497 ~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~--~~--------------------lpp-- 549 (874)
+|+|||++.+ ..++.++|||||||++|||++|..||.... ..+..+.. +. ++.
T Consensus 206 ~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (371)
T 4exu_A 206 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP 285 (371)
T ss_dssp TTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCC
T ss_pred cccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCc
Confidence 9999999987 678999999999999999999999884211 11111110 00 000
Q ss_pred ------CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 550 ------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 550 ------~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
.+....+.+.+||.+||.+||.+|||+.|+|+||||+.+....
T Consensus 286 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~ 334 (371)
T 4exu_A 286 RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE 334 (371)
T ss_dssp CCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCGG
T ss_pred chhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCCcc
Confidence 1234467899999999999999999999999999999776544
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=282.13 Aligned_cols=201 Identities=19% Similarity=0.169 Sum_probs=154.7
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.+......++. .+++||||+|++|.+++... .+++.+++.++.||
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l 114 (271)
T 3dtc_A 53 VRQEAKLFAMLKHPNIIALRGVCLKEPN----------------LCLVMEFARGGPLNRVLSGK--RIPPDILVNWAVQI 114 (271)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEECCC------------------CEEEEECCTTEEHHHHHTSS--CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEeeEEEEEecCCc----------------eEEEEEcCCCCCHHHHhhcC--CCCHHHHHHHHHHH
Confidence 4445667777889999988876553332 25799999999999999654 69999999999999
Q ss_pred HHHHHHHHHCC---CcccCCCCCceEEec--------CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccc
Q 002843 339 VALVDYHHTQG---VTFLDLKPSSFKLLQ--------SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTT 407 (874)
Q Consensus 339 l~aL~yLHs~g---IIHRDLKPsNILL~~--------~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~ 407 (874)
+.||.|||++| |+||||||+|||++. ++.+||+|||+++.....
T Consensus 115 ~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------------------------- 169 (271)
T 3dtc_A 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT------------------------- 169 (271)
T ss_dssp HHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--------------------------------
T ss_pred HHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccc-------------------------
Confidence 99999999999 899999999999986 678999999998643200
Q ss_pred cchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccc
Q 002843 408 GIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQST 487 (874)
Q Consensus 408 ~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~ 487 (874)
T Consensus 170 -------------------------------------------------------------------------------- 169 (271)
T 3dtc_A 170 -------------------------------------------------------------------------------- 169 (271)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCC-CCCCCCCCCHHHHHHHHH
Q 002843 488 SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRI-LPPSFLSENPKEAGFCLW 564 (874)
Q Consensus 488 ~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~-lpp~~~~~~p~l~dLi~~ 564 (874)
......||+.|+|||++.+..++.++|||||||++|+|++|..||.... .....+.... .++......+.+.+|+.+
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 249 (271)
T 3dtc_A 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMED 249 (271)
T ss_dssp ------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHH
T ss_pred cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHH
Confidence 0013467899999999998889999999999999999999999985322 1222222222 233334455779999999
Q ss_pred ccccCCCCCCChhHHhhh
Q 002843 565 QLHPEPLSRPTTREILQS 582 (874)
Q Consensus 565 cL~~dP~~RPTa~EiL~h 582 (874)
||+.||.+|||+.|++++
T Consensus 250 ~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 250 CWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp HTCSSGGGSCCHHHHHHH
T ss_pred HhcCCcccCcCHHHHHHH
Confidence 999999999999999876
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=285.69 Aligned_cols=212 Identities=14% Similarity=0.030 Sum_probs=167.1
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYI 334 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I 334 (874)
.......+...+....||+++.++.... +.. .+++||||+|++|.+++......+++.+++.+
T Consensus 53 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 115 (287)
T 1u59_A 53 DTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEA----------------LMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL 115 (287)
T ss_dssp HHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSS----------------EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCEeEEEEEec-CCC----------------cEEEEEeCCCCCHHHHHHhCCccCCHHHHHHH
Confidence 3344556667777888999998887652 111 25799999999999999776557999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 116 ~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~------------------------------ 165 (287)
T 1u59_A 116 LHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS------------------------------ 165 (287)
T ss_dssp HHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC------------------------------
T ss_pred HHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc------------------------------
Confidence 99999999999999999999999999999999999999999874330000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
.........|
T Consensus 166 ----------------------------------------------------------------------~~~~~~~~~~ 175 (287)
T 1u59_A 166 ----------------------------------------------------------------------YYTARSAGKW 175 (287)
T ss_dssp ----------------------------------------------------------------------EECCCCSSCC
T ss_pred ----------------------------------------------------------------------eeeccccccc
Confidence 0000023456
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
|+.|+|||++.+..++.++|||||||++|||++ |..||.. ....+..+.....++......+.+.+||.+||..||.
T Consensus 176 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 255 (287)
T 1u59_A 176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWE 255 (287)
T ss_dssp CGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGG
T ss_pred cccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChh
Confidence 889999999998889999999999999999998 9988843 2223444444444444445668899999999999999
Q ss_pred CCCChhHHhhhH
Q 002843 572 SRPTTREILQSE 583 (874)
Q Consensus 572 ~RPTa~EiL~hp 583 (874)
+||++.+++++.
T Consensus 256 ~Rps~~~l~~~l 267 (287)
T 1u59_A 256 DRPDFLTVEQRM 267 (287)
T ss_dssp GSCCHHHHHHHH
T ss_pred hCcCHHHHHHHH
Confidence 999999999873
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-32 Score=297.44 Aligned_cols=221 Identities=17% Similarity=0.114 Sum_probs=160.9
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYI 334 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~I 334 (874)
+...+...+....||+++.+.......+.... ... ..+++||||+| +|.+.+.. ....+++..++.|
T Consensus 65 ~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~-----~~~----~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~ 134 (360)
T 3e3p_A 65 RELQIMQDLAVLHHPNIVQLQSYFYTLGERDR-----RDI----YLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVF 134 (360)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEEEEEEECSSCT-----TCE----EEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccHHHhhhccccccc-----cce----eEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHH
Confidence 34444455666789999998877543322110 000 13679999996 55555542 3347999999999
Q ss_pred HHHHHHHHHHHH--HCCCcccCCCCCceEEec-CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchh
Q 002843 335 FRQIVALVDYHH--TQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (874)
Q Consensus 335 ~~QIl~aL~yLH--s~gIIHRDLKPsNILL~~-~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~ 411 (874)
+.||+.||.||| ++||+||||||+|||++. ++.+||+|||+++.....
T Consensus 135 ~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~----------------------------- 185 (360)
T 3e3p_A 135 LFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPS----------------------------- 185 (360)
T ss_dssp HHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTT-----------------------------
T ss_pred HHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCC-----------------------------
Confidence 999999999999 999999999999999997 899999999998643200
Q ss_pred hhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccc
Q 002843 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (874)
Q Consensus 412 ~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~ 491 (874)
.....
T Consensus 186 ---------------------------------------------------------------------------~~~~~ 190 (360)
T 3e3p_A 186 ---------------------------------------------------------------------------EPNVA 190 (360)
T ss_dssp ---------------------------------------------------------------------------SCCCS
T ss_pred ---------------------------------------------------------------------------CCccc
Confidence 00024
Q ss_pred ccccccccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc---------------C--------
Q 002843 492 QLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD---------------R-------- 545 (874)
Q Consensus 492 ~~GT~~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~---------------~-------- 545 (874)
..||+.|+|||++.+.. ++.++|||||||++|||++|..||... ...+..+.. .
T Consensus 191 ~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (360)
T 3e3p_A 191 YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYN 270 (360)
T ss_dssp TTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGC
T ss_pred ccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccc
Confidence 46789999999997655 899999999999999999999988321 111111111 0
Q ss_pred --------CCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 546 --------ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 546 --------~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
.++.......+.+.+||.+||++||.+|||+.|+|+||||+......
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~ 325 (360)
T 3e3p_A 271 SKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPA 325 (360)
T ss_dssp CCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTT
T ss_pred cccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCcc
Confidence 00111112346789999999999999999999999999999876544
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=290.33 Aligned_cols=218 Identities=16% Similarity=0.072 Sum_probs=168.2
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYI 334 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I 334 (874)
.......+..++....||+++.++.....++... .+++||||+|++|.+++... .+++.+++.|
T Consensus 76 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i 139 (318)
T 3lxp_A 76 HRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS--------------LQLVMEYVPLGSLRDYLPRH--SIGLAQLLLF 139 (318)
T ss_dssp HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE--------------EEEEECCCTTCBHHHHGGGS--CCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce--------------EEEEEecccCCcHHHHHhhC--CCCHHHHHHH
Confidence 3344566677888888999999888766443222 25799999999999999876 4999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 140 ~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~------------------------------ 189 (318)
T 3lxp_A 140 AQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE------------------------------ 189 (318)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS------------------------------
T ss_pred HHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccccccc------------------------------
Confidence 99999999999999999999999999999999999999999874330000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
.........|
T Consensus 190 ----------------------------------------------------------------------~~~~~~~~~~ 199 (318)
T 3lxp_A 190 ----------------------------------------------------------------------YYRVREDGDS 199 (318)
T ss_dssp ----------------------------------------------------------------------EEEC---CCC
T ss_pred ----------------------------------------------------------------------ccccccCCCC
Confidence 0000023457
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH-----------------HHHHhhcCCCCCCCCCCCHH
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA-----------------AMSDLRDRILPPSFLSENPK 557 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~-----------------~~~~l~~~~lpp~~~~~~p~ 557 (874)
|+.|+|||++.+..++.++|||||||++|||++|..|+..... ....+.....++......+.
T Consensus 200 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (318)
T 3lxp_A 200 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAE 279 (318)
T ss_dssp CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHH
T ss_pred CceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHH
Confidence 8899999999988899999999999999999999988743321 12222333344444555678
Q ss_pred HHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 558 EAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 558 l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
+.+||.+||+.||.+|||+.|+++ +++.+.+
T Consensus 280 l~~li~~~l~~dP~~Rps~~ell~--~L~~l~~ 310 (318)
T 3lxp_A 280 VYHLMKNCWETEASFRPTFENLIP--ILKTVHE 310 (318)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH--HHHHHHH
T ss_pred HHHHHHHHcCCCcccCcCHHHHHH--HHHHHHH
Confidence 999999999999999999999984 4554443
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=287.52 Aligned_cols=218 Identities=17% Similarity=0.150 Sum_probs=162.8
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFR 336 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~ 336 (874)
+.+..-..+....||+++.+++......... ....+++|||++ ++|.+++.... ..+++.+++.++.
T Consensus 60 ~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~-----------~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~ 127 (326)
T 1blx_A 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDR-----------ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMF 127 (326)
T ss_dssp HHHHHHHHHHHTCCTTBCCEEEEEEEEECSS-----------EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHH
T ss_pred HHHHHHHhhhccCCCCeEeeeeeeeecccCC-----------CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHH
Confidence 3344334455558999998877654211100 011367999998 59999998753 2599999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 128 qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~---------------------------------- 173 (326)
T 1blx_A 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---------------------------------- 173 (326)
T ss_dssp HHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGG----------------------------------
T ss_pred HHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCC----------------------------------
Confidence 9999999999999999999999999999999999999988632200
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......||+
T Consensus 174 ----------------------------------------------------------------------~~~~~~~~~~ 183 (326)
T 1blx_A 174 ----------------------------------------------------------------------MALTSVVVTL 183 (326)
T ss_dssp ----------------------------------------------------------------------GGGCCCCCCC
T ss_pred ----------------------------------------------------------------------CCcccccccc
Confidence 0002456789
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc---C----CCC-------------------
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD---R----ILP------------------- 548 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~---~----~lp------------------- 548 (874)
.|+|||++.+..++.++|||||||++|||++|..||.... ..+..+.. . ..+
T Consensus 184 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (326)
T 1blx_A 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIE 263 (326)
T ss_dssp TTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGG
T ss_pred ceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhh
Confidence 9999999999899999999999999999999999883211 11111111 0 000
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 549 PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 549 p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
.......+.+.+||.+||.+||.+|||+.|+|+||||+.+...
T Consensus 264 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~ 306 (326)
T 1blx_A 264 KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 306 (326)
T ss_dssp GTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred hccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccchh
Confidence 0112344678899999999999999999999999999876543
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=299.52 Aligned_cols=217 Identities=14% Similarity=0.158 Sum_probs=157.0
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+........... .....+++||||+| +|.+++.. .+++.++..++.
T Consensus 69 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~----------~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~ 134 (371)
T 2xrw_A 69 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE----------EFQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLY 134 (371)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEECSCCSTT----------TCCEEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCccceEEeeccccccc----------cccceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHH
Confidence 33456667888889999998887654332110 00113689999985 89999863 599999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 135 qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~---------------------------------- 180 (371)
T 2xrw_A 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---------------------------------- 180 (371)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-----------------------------------------
T ss_pred HHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccc----------------------------------
Confidence 9999999999999999999999999999999999999998633200
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
......+||+
T Consensus 181 ----------------------------------------------------------------------~~~~~~~gt~ 190 (371)
T 2xrw_A 181 ----------------------------------------------------------------------FMMTPYVVTR 190 (371)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred ----------------------------------------------------------------------cccCCceecC
Confidence 0002457899
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCC--------------------CCCCC--
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRIL--------------------PPSFL-- 552 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~l--------------------pp~~~-- 552 (874)
.|+|||++.+..|+.++|||||||++|||++|..||.... ..+..+..... .+.+.
T Consensus 191 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (371)
T 2xrw_A 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGY 270 (371)
T ss_dssp TTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCC
T ss_pred CccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCcccccc
Confidence 9999999999899999999999999999999998883211 11222211100 01110
Q ss_pred ------------CC-------CHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 553 ------------SE-------NPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 553 ------------~~-------~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
.. .+.+.+||.+||.+||.+|||+.|+|+||||+.....
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~ 328 (371)
T 2xrw_A 271 SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 328 (371)
T ss_dssp CHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTCCH
T ss_pred chhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhcCc
Confidence 00 2457899999999999999999999999999865443
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-31 Score=281.67 Aligned_cols=201 Identities=15% Similarity=0.144 Sum_probs=158.8
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.++.... ...+++||||+|++|.+++......+++..++.++.|
T Consensus 69 ~~~~E~~~l~~l~h~~i~~~~~~~~------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 130 (287)
T 4f0f_A 69 EFQREVFIMSNLNHPNIVKLYGLMH------------------NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLD 130 (287)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEET------------------TTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCchhhheeec------------------CCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHH
Confidence 3455667777788999988876532 1124799999999999999877668999999999999
Q ss_pred HHHHHHHHHHCC--CcccCCCCCceEEecCCc-----EEEeccccchhccccccCCCCcchhhhhhcccchhhhccccch
Q 002843 338 IVALVDYHHTQG--VTFLDLKPSSFKLLQSNQ-----VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIA 410 (874)
Q Consensus 338 Il~aL~yLHs~g--IIHRDLKPsNILL~~~~~-----vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~ 410 (874)
|+.||+|||++| |+||||||+|||++.++. +||+|||+++....
T Consensus 131 l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~----------------------------- 181 (287)
T 4f0f_A 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH----------------------------- 181 (287)
T ss_dssp HHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS-----------------------------
T ss_pred HHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc-----------------------------
Confidence 999999999999 999999999999988776 99999998763220
Q ss_pred hhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccc
Q 002843 411 SAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVS 490 (874)
Q Consensus 411 ~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t 490 (874)
...
T Consensus 182 -----------------------------------------------------------------------------~~~ 184 (287)
T 4f0f_A 182 -----------------------------------------------------------------------------SVS 184 (287)
T ss_dssp -----------------------------------------------------------------------------CEE
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 002
Q ss_pred cccccccccCccccc--CCCCCCccchhHHHHHHHHhcCCCCchHHH----HHHHHHhhcCCCCCC-CCCCCHHHHHHHH
Q 002843 491 EQLEEKWYASPEELS--GGVCTTSSNIYSLGVLFFELFGRFDSERAL----AAAMSDLRDRILPPS-FLSENPKEAGFCL 563 (874)
Q Consensus 491 ~~~GT~~Y~APEvl~--g~~ys~kSDIwSLGVIL~ELltG~~p~~~~----~~~~~~l~~~~lpp~-~~~~~p~l~dLi~ 563 (874)
...||+.|+|||++. ...++.++|||||||++|||++|..||... ......+.....++. .....+.+.+|+.
T Consensus 185 ~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 264 (287)
T 4f0f_A 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIE 264 (287)
T ss_dssp CCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHH
T ss_pred ccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHH
Confidence 456889999999994 455889999999999999999999998431 122333333333333 3345678999999
Q ss_pred HccccCCCCCCChhHHhhh
Q 002843 564 WQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 564 ~cL~~dP~~RPTa~EiL~h 582 (874)
+||+.||.+|||+.|+++.
T Consensus 265 ~~l~~dp~~Rps~~~ll~~ 283 (287)
T 4f0f_A 265 LCWSGDPKKRPHFSYIVKE 283 (287)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHhcCChhhCcCHHHHHHH
Confidence 9999999999999999863
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=306.19 Aligned_cols=205 Identities=15% Similarity=0.103 Sum_probs=163.7
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC-CCCHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYI 334 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~-~lse~e~~~I 334 (874)
......+..++....||+++.++......... .+++||||+||+|.++|...+. .+++..++.|
T Consensus 230 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---------------~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~ 294 (450)
T 1k9a_A 230 AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG---------------LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 294 (450)
T ss_dssp SHHHHHHHHHHHTCCCTTBCCEEEEEECTTSC---------------EEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCEEEEEEEEEcCCCc---------------eEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHH
Confidence 34456677788888999999988765432211 2579999999999999987543 4799999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 295 ~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-------------------------------- 342 (450)
T 1k9a_A 295 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-------------------------------- 342 (450)
T ss_dssp HHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----------------------------------
T ss_pred HHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc--------------------------------
Confidence 999999999999999999999999999999999999999998632200
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
.....+
T Consensus 343 --------------------------------------------------------------------------~~~~~~ 348 (450)
T 1k9a_A 343 --------------------------------------------------------------------------QDTGKL 348 (450)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred --------------------------------------------------------------------------ccCCCC
Confidence 011245
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
++.|+|||++.+..++.++|||||||+||||++ |..||... ......+..+..++......+.+.+||.+||+.||.
T Consensus 349 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~ 428 (450)
T 1k9a_A 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAA 428 (450)
T ss_dssp CTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChh
Confidence 678999999999999999999999999999998 98887432 223344444444444445568899999999999999
Q ss_pred CCCChhHHhh
Q 002843 572 SRPTTREILQ 581 (874)
Q Consensus 572 ~RPTa~EiL~ 581 (874)
+|||+.++++
T Consensus 429 ~Rpt~~~l~~ 438 (450)
T 1k9a_A 429 TRPTFLQLRE 438 (450)
T ss_dssp GSCCHHHHHH
T ss_pred HCcCHHHHHH
Confidence 9999999875
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-31 Score=278.28 Aligned_cols=204 Identities=14% Similarity=0.062 Sum_probs=160.2
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC-CCCHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIF 335 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~-~lse~e~~~I~ 335 (874)
.....+..++....||+++.++......... ..+++||||+|++|.+++..... .+++.+++.|+
T Consensus 52 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~ 117 (271)
T 3kmu_A 52 RDFNEECPRLRIFSHPNVLPVLGACQSPPAP--------------HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFA 117 (271)
T ss_dssp HHHHHHGGGGCCCSCTTEECEEEEECTTTSS--------------SCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCchhheEEEEccCCCC--------------CeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHH
Confidence 3455666788888999999988765433111 12679999999999999987543 59999999999
Q ss_pred HHHHHHHHHHHHCC--CcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 336 RQIVALVDYHHTQG--VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 336 ~QIl~aL~yLHs~g--IIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
.||+.||+|||++| |+||||||+|||++.++.++++|||++....
T Consensus 118 ~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~--------------------------------- 164 (271)
T 3kmu_A 118 LDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ--------------------------------- 164 (271)
T ss_dssp HHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS---------------------------------
T ss_pred HHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec---------------------------------
Confidence 99999999999999 9999999999999999999999988753111
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
.....
T Consensus 165 ---------------------------------------------------------------------------~~~~~ 169 (271)
T 3kmu_A 165 ---------------------------------------------------------------------------SPGRM 169 (271)
T ss_dssp ---------------------------------------------------------------------------CTTCB
T ss_pred ---------------------------------------------------------------------------ccCcc
Confidence 02346
Q ss_pred ccccccCcccccCCCCCC---ccchhHHHHHHHHhcCCCCchHHH---HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccc
Q 002843 494 EEKWYASPEELSGGVCTT---SSNIYSLGVLFFELFGRFDSERAL---AAAMSDLRDRILPPSFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~---kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~ 567 (874)
||+.|+|||++.+..++. ++|||||||++|||++|..||... ............++......+.+.+|+.+||+
T Consensus 170 ~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 249 (271)
T 3kmu_A 170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMN 249 (271)
T ss_dssp SCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTC
T ss_pred CCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcC
Confidence 788999999999866544 799999999999999999998432 11222233333333344556789999999999
Q ss_pred cCCCCCCChhHHhhh
Q 002843 568 PEPLSRPTTREILQS 582 (874)
Q Consensus 568 ~dP~~RPTa~EiL~h 582 (874)
.||.+|||+.|+++.
T Consensus 250 ~~p~~Rps~~~il~~ 264 (271)
T 3kmu_A 250 EDPAKRPKFDMIVPI 264 (271)
T ss_dssp SSGGGSCCHHHHHHH
T ss_pred CChhhCcCHHHHHHH
Confidence 999999999999753
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-32 Score=305.06 Aligned_cols=216 Identities=18% Similarity=0.149 Sum_probs=159.6
Q ss_pred HHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHH--hCCCCCCHHHHHHHHHHHH
Q 002843 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLN--ARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~--~~~~~lse~e~~~I~~QIl 339 (874)
+..+++...||+++.+.......+... .. .-.+++||||+++.+..+.. .....+++..++.|++||+
T Consensus 82 E~~il~~l~h~niv~l~~~~~~~~~~~-------~~---~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~ 151 (394)
T 4e7w_A 82 ELQIMRIVKHPNVVDLKAFFYSNGDKK-------DE---VFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL 151 (394)
T ss_dssp HHHHHHTCCCTTBCCEEEEEEEESSSS-------SC---EEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcceEEEEEEecCCCC-------Cc---eEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 556677888999999887765433211 00 00357999999754443332 2234799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEe-cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLL-QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~-~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
.||+|||++||+||||||+|||++ .++.+||+|||+++.....
T Consensus 152 ~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~------------------------------------ 195 (394)
T 4e7w_A 152 RSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG------------------------------------ 195 (394)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT------------------------------------
T ss_pred HHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC------------------------------------
Confidence 999999999999999999999999 7899999999998743200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......+||++|
T Consensus 196 --------------------------------------------------------------------~~~~~~~~t~~y 207 (394)
T 4e7w_A 196 --------------------------------------------------------------------EPNVSYICSRYY 207 (394)
T ss_dssp --------------------------------------------------------------------CCCCSSCSCGGG
T ss_pred --------------------------------------------------------------------CCCcccccCcCc
Confidence 000245778999
Q ss_pred cCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhh--------------c----CCCCCC------
Q 002843 499 ASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLR--------------D----RILPPS------ 550 (874)
Q Consensus 499 ~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~--------------~----~~lpp~------ 550 (874)
+|||++.+. .|+.++|||||||+||||++|..||... ......+. . ..++..
T Consensus 208 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (394)
T 4e7w_A 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFS 287 (394)
T ss_dssp CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHH
T ss_pred cCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHH
Confidence 999999875 4899999999999999999999988321 11111111 0 011110
Q ss_pred --C-CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 551 --F-LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 551 --~-~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
+ ....+.+.+||.+||.+||.+|||+.|+|+||||++++..
T Consensus 288 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 331 (394)
T 4e7w_A 288 KVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTG 331 (394)
T ss_dssp HHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSS
T ss_pred HhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhccc
Confidence 1 1245778999999999999999999999999999987654
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-32 Score=303.12 Aligned_cols=224 Identities=20% Similarity=0.169 Sum_probs=133.7
Q ss_pred ceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 304 LRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL~yLHs~-gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
+++|||| +++|.+++... ...+++.+++.|+.||+.||+|||++ ||+||||||+||||+.++.....+++.......
T Consensus 121 ~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~ 199 (397)
T 1wak_A 121 CMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQR 199 (397)
T ss_dssp EEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC----
T ss_pred EEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhh
Confidence 6899999 56777776553 34799999999999999999999998 999999999999998775211111111110000
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
.... ..........+...+.+.. .... .....
T Consensus 200 ~~~~---~~~~~~~~~~~~~~~~~~~-------------------------------~~~~--------------~~~~~ 231 (397)
T 1wak_A 200 SGAP---PPSGSAVSTAPATAGNFLV-------------------------------NPLE--------------PKNAE 231 (397)
T ss_dssp --------------------CCTTSC-------------------------------CTTS--------------GGGGG
T ss_pred cCCC---CCCCCccccCCcccccccc-------------------------------cccc--------------ccccc
Confidence 0000 0000000000000000000 0000 00000
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH-------
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA------- 534 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~------- 534 (874)
....++.|||.++.. ....+..+||+.|+|||++.+..|+.++|||||||+||||++|..||..
T Consensus 232 ~~~~kl~DfG~a~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~ 302 (397)
T 1wak_A 232 KLKVKIADLGNACWV---------HKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYT 302 (397)
T ss_dssp GCCEEECCGGGCEET---------TBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSC
T ss_pred ccceEeccccccccc---------cccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccC
Confidence 012344444443211 0011355789999999999998999999999999999999999888731
Q ss_pred --HH--HHHHHhhcCCCCC----------C----------------------------CC-CCCHHHHHHHHHccccCCC
Q 002843 535 --LA--AAMSDLRDRILPP----------S----------------------------FL-SENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 535 --~~--~~~~~l~~~~lpp----------~----------------------------~~-~~~p~l~dLi~~cL~~dP~ 571 (874)
.. ..+..+... .|. . +. ...+.+.+||.+||++||+
T Consensus 303 ~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 381 (397)
T 1wak_A 303 RDEDHIALIIELLGK-VPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPE 381 (397)
T ss_dssp HHHHHHHHHHHHHCS-CCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGG
T ss_pred chHHHHHHHHHhcCC-CChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChh
Confidence 11 111111111 000 0 00 0113477999999999999
Q ss_pred CCCChhHHhhhHHHH
Q 002843 572 SRPTTREILQSEVTN 586 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~ 586 (874)
+|||+.|+|+||||+
T Consensus 382 ~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 382 KRATAAECLRHPWLN 396 (397)
T ss_dssp GSCCHHHHHTSGGGG
T ss_pred hcCCHHHHhhCcccc
Confidence 999999999999996
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-31 Score=279.85 Aligned_cols=208 Identities=15% Similarity=0.082 Sum_probs=165.2
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+...+....||+++.++.....++. .+++|||++|++|.+++......+++..++.++.
T Consensus 48 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 111 (267)
T 3t9t_A 48 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAP----------------ICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL 111 (267)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEECSSSS----------------CEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEccCCC----------------eEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHH
Confidence 345556677777889999988876553322 2579999999999999988655799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 112 ~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-------------------------------- 159 (267)
T 3t9t_A 112 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------------------------------- 159 (267)
T ss_dssp HHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH--------------------------------
T ss_pred HHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccccc--------------------------------
Confidence 999999999999999999999999999999999999999874330000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......+|+
T Consensus 160 ----------------------------------------------------------------------~~~~~~~~~~ 169 (267)
T 3t9t_A 160 ----------------------------------------------------------------------TSSTGTKFPV 169 (267)
T ss_dssp ----------------------------------------------------------------------HSTTSTTCCG
T ss_pred ----------------------------------------------------------------------cccccccccc
Confidence 0002335678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....+.......+.+.+|+.+||+.||.+|
T Consensus 170 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 249 (267)
T 3t9t_A 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDR 249 (267)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred cccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhC
Confidence 9999999998889999999999999999999 8888843 223344444443333333456789999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
|++.+++++
T Consensus 250 ps~~~ll~~ 258 (267)
T 3t9t_A 250 PAFSRLLRQ 258 (267)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 999999875
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=298.25 Aligned_cols=206 Identities=11% Similarity=0.034 Sum_probs=155.9
Q ss_pred HHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHH
Q 002843 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (874)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~y 344 (874)
.+....||+++.++.....+.... ...+++|||| |++|.+++...+..+++.+++.|+.||+.||+|
T Consensus 101 ~~~~l~h~~iv~~~~~~~~~~~~~------------~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~ 167 (364)
T 3op5_A 101 RTRKLKYLGVPKYWGSGLHDKNGK------------SYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEY 167 (364)
T ss_dssp HHTTCSCCCSCCEEEEEEEEETTE------------EEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHhhccCCCCCeEEeeeeeccCCc------------ceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 445667899998887755432200 0026799999 999999998875689999999999999999999
Q ss_pred HHHCCCcccCCCCCceEEe--cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 345 HHTQGVTFLDLKPSSFKLL--QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 345 LHs~gIIHRDLKPsNILL~--~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
||++||+||||||+|||++ .++.+||+|||+++.+......
T Consensus 168 lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~------------------------------------- 210 (364)
T 3op5_A 168 IHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVH------------------------------------- 210 (364)
T ss_dssp HHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCC-------------------------------------
T ss_pred HHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcc-------------------------------------
Confidence 9999999999999999999 8899999999998754311000
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
... .........||+.|+|||
T Consensus 211 ----------------~~~-------------------------------------------~~~~~~~~~gt~~y~aPE 231 (364)
T 3op5_A 211 ----------------KAY-------------------------------------------AADPKRCHDGTIEFTSID 231 (364)
T ss_dssp ----------------CCS-------------------------------------------SCCSSCCCCCCTTTCCHH
T ss_pred ----------------ccc-------------------------------------------ccCcccccCCCCCccCHH
Confidence 000 000013457999999999
Q ss_pred cccCCCCCCccchhHHHHHHHHhcCCCCchHHHH---HHH-----------HHhhcCCCCCCCCCCCHHHHHHHHHcccc
Q 002843 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA---AAM-----------SDLRDRILPPSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 503 vl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~~~-----------~~l~~~~lpp~~~~~~p~l~dLi~~cL~~ 568 (874)
++.+..++.++|||||||+||||++|..||.... ... ..+....+++ ....+.+.+|+.+||..
T Consensus 232 ~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~ 309 (364)
T 3op5_A 232 AHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPA--ANAPGEIAKYMETVKLL 309 (364)
T ss_dssp HHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCT--TCCCHHHHHHHHHHHTC
T ss_pred HhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhccc--ccCHHHHHHHHHHHhcC
Confidence 9999899999999999999999999999986311 000 0111111111 23457789999999999
Q ss_pred CCCCCCChhHHhh
Q 002843 569 EPLSRPTTREILQ 581 (874)
Q Consensus 569 dP~~RPTa~EiL~ 581 (874)
+|.+||++.+|++
T Consensus 310 ~p~~RP~~~~l~~ 322 (364)
T 3op5_A 310 DYTEKPLYENLRD 322 (364)
T ss_dssp CTTCCCCHHHHHH
T ss_pred CCCCCCCHHHHHH
Confidence 9999999999875
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-31 Score=284.89 Aligned_cols=204 Identities=15% Similarity=0.155 Sum_probs=159.5
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC--CCCHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH--KGKRIECL 332 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~--~lse~e~~ 332 (874)
.......+...+....||+++.++.... ...+++||||+|++|.+++..... .+++.+++
T Consensus 44 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 105 (307)
T 2eva_A 44 ERKAFIVELRQLSRVNHPNIVKLYGACL------------------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM 105 (307)
T ss_dssp HHHHHHHHHHHHHHCCCTTBCCEEEBCT------------------TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcCeEEEEEc------------------CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHH
Confidence 3344566677788889999998876432 113679999999999999986542 47899999
Q ss_pred HHHHHHHHHHHHHHH---CCCcccCCCCCceEEecCCc-EEEeccccchhccccccCCCCcchhhhhhcccchhhhcccc
Q 002843 333 YIFRQIVALVDYHHT---QGVTFLDLKPSSFKLLQSNQ-VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTG 408 (874)
Q Consensus 333 ~I~~QIl~aL~yLHs---~gIIHRDLKPsNILL~~~~~-vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~ 408 (874)
.++.||+.||+|||+ +||+||||||+|||++.++. +||+|||+++.....
T Consensus 106 ~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-------------------------- 159 (307)
T 2eva_A 106 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-------------------------- 159 (307)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------------------------------
T ss_pred HHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--------------------------
Confidence 999999999999999 89999999999999998886 799999988632200
Q ss_pred chhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccc
Q 002843 409 IASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTS 488 (874)
Q Consensus 409 ~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~ 488 (874)
T Consensus 160 -------------------------------------------------------------------------------- 159 (307)
T 2eva_A 160 -------------------------------------------------------------------------------- 159 (307)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH----HHHHHHHhhcCCCCCCCCCCCHHHHHHHHH
Q 002843 489 VSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA----LAAAMSDLRDRILPPSFLSENPKEAGFCLW 564 (874)
Q Consensus 489 ~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~----~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~ 564 (874)
.....||+.|+|||++.+..++.++|||||||++|||++|..||.. ....+..+.....++......+.+.+|+.+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 239 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTR 239 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHH
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHH
Confidence 0233578999999999998999999999999999999999999853 122233344444455555566789999999
Q ss_pred ccccCCCCCCChhHHhhh
Q 002843 565 QLHPEPLSRPTTREILQS 582 (874)
Q Consensus 565 cL~~dP~~RPTa~EiL~h 582 (874)
||+.||.+|||+.+++++
T Consensus 240 ~l~~dp~~Rps~~ell~~ 257 (307)
T 2eva_A 240 CWSKDPSQRPSMEEIVKI 257 (307)
T ss_dssp HTCSSGGGSCCHHHHHHH
T ss_pred HhcCChhhCcCHHHHHHH
Confidence 999999999999999875
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=306.85 Aligned_cols=212 Identities=13% Similarity=0.100 Sum_probs=154.1
Q ss_pred HhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHH
Q 002843 263 AMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (874)
Q Consensus 263 ~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~a 341 (874)
..++... .||+++.++.....+... +++||||. |+|.+++......+.+.+++.|+.||+.|
T Consensus 68 ~~~l~~l~~HpnIv~l~~~~~~~~~~----------------~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~a 130 (432)
T 3p23_A 68 VQLLRESDEHPNVIRYFCTEKDRQFQ----------------YIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSG 130 (432)
T ss_dssp HHHHHHSCCCTTBCCEEEEEEETTEE----------------EEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHH
T ss_pred HHHHHhccCCCCcCeEEEEEecCCEE----------------EEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHH
Confidence 3344444 799999998765533332 56999997 59999998876567777889999999999
Q ss_pred HHHHHHCCCcccCCCCCceEEecC-----CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 342 VDYHHTQGVTFLDLKPSSFKLLQS-----NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 342 L~yLHs~gIIHRDLKPsNILL~~~-----~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
|+|||++||+||||||+|||++.+ ..+||+|||+++.......
T Consensus 131 L~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~-------------------------------- 178 (432)
T 3p23_A 131 LAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH-------------------------------- 178 (432)
T ss_dssp HHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-------------------------------------
T ss_pred HHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc--------------------------------
Confidence 999999999999999999999532 3588999999874330000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
........+||+
T Consensus 179 --------------------------------------------------------------------~~~~~~~~~gt~ 190 (432)
T 3p23_A 179 --------------------------------------------------------------------SFSRRSGVPGTE 190 (432)
T ss_dssp ---------------------------------------------------------------------------CCSCT
T ss_pred --------------------------------------------------------------------ceeeccccCCCc
Confidence 000013457999
Q ss_pred cccCcccccC---CCCCCccchhHHHHHHHHhcC-CCCchHHHHHHH-HHhhcCCCCCCCCCC---CHHHHHHHHHcccc
Q 002843 497 WYASPEELSG---GVCTTSSNIYSLGVLFFELFG-RFDSERALAAAM-SDLRDRILPPSFLSE---NPKEAGFCLWQLHP 568 (874)
Q Consensus 497 ~Y~APEvl~g---~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~~~~~-~~l~~~~lpp~~~~~---~p~l~dLi~~cL~~ 568 (874)
+|+|||++.+ ..++.++|||||||++|||++ |..||....... ..+......+..... .+.+.+||.+||+.
T Consensus 191 ~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 270 (432)
T 3p23_A 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAM 270 (432)
T ss_dssp TSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCS
T ss_pred CccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhC
Confidence 9999999984 457889999999999999999 888874322211 122221111111111 24478999999999
Q ss_pred CCCCCCChhHHhhhHHHHhhHhh
Q 002843 569 EPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
||.+|||+.|+|+||||..+.+.
T Consensus 271 dP~~Rps~~evl~hp~f~~~~~~ 293 (432)
T 3p23_A 271 DPQKRPSAKHVLKHPFFWSLEKQ 293 (432)
T ss_dssp SGGGSCCHHHHHTSTTTCCHHHH
T ss_pred CHhhCCCHHHHHhCccccChHHH
Confidence 99999999999999999876543
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-32 Score=297.61 Aligned_cols=213 Identities=12% Similarity=0.110 Sum_probs=168.0
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHH------HHhC-CCCCCHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREW------LNAR-GHKGKRI 329 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~------L~~~-~~~lse~ 329 (874)
.....+...+....||+++.+......++. .+++||||+|++|.++ +... ...+++.
T Consensus 88 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~ 151 (348)
T 2pml_X 88 DDFKNELQIITDIKNEYCLTCEGIITNYDE----------------VYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151 (348)
T ss_dssp HHHHHHHHHHTTCCCTTBCCCSEEEESSSE----------------EEEEEECCTTCBSSEESSSEESSCSSSCCCCCHH
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEeeCCe----------------EEEEEeccCCCcHHHHHHHhhhhhhccccCCCHH
Confidence 445556677888889999988877654332 2569999999999999 6552 3479999
Q ss_pred HHHHHHHHHHHHHHHHHH-CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhcccc
Q 002843 330 ECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTG 408 (874)
Q Consensus 330 e~~~I~~QIl~aL~yLHs-~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~ 408 (874)
+++.|+.||+.||.|||+ +||+||||||+|||++.++.+||+|||+++.....
T Consensus 152 ~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-------------------------- 205 (348)
T 2pml_X 152 VIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK-------------------------- 205 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT--------------------------
T ss_pred HHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccc--------------------------
Confidence 999999999999999999 99999999999999999999999999988633200
Q ss_pred chhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccc
Q 002843 409 IASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTS 488 (874)
Q Consensus 409 ~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~ 488 (874)
.
T Consensus 206 -------------------------------------------------------------------------------~ 206 (348)
T 2pml_X 206 -------------------------------------------------------------------------------K 206 (348)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred cccccccccccCcccccCC-CCCC-ccchhHHHHHHHHhcCCCCchHHH---HHHHHHhhcCCCCCCC------------
Q 002843 489 VSEQLEEKWYASPEELSGG-VCTT-SSNIYSLGVLFFELFGRFDSERAL---AAAMSDLRDRILPPSF------------ 551 (874)
Q Consensus 489 ~t~~~GT~~Y~APEvl~g~-~ys~-kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~~~~lpp~~------------ 551 (874)
.....||+.|+|||++.+. .++. ++|||||||++|||++|..||... ......+.....+...
T Consensus 207 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 286 (348)
T 2pml_X 207 IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNK 286 (348)
T ss_dssp ECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC-
T ss_pred ccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhcccccc
Confidence 0244688999999999987 5666 999999999999999999988432 2334444433221110
Q ss_pred ------CCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 552 ------LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 552 ------~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
...++.+.+||.+||+.||.+|||+.|+|+||||+....
T Consensus 287 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~~ 331 (348)
T 2pml_X 287 KSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNI 331 (348)
T ss_dssp -------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCCH
T ss_pred ccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCCH
Confidence 334577899999999999999999999999999987543
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=291.03 Aligned_cols=209 Identities=13% Similarity=0.116 Sum_probs=160.9
Q ss_pred HHHHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-------------
Q 002843 257 ALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR------------- 322 (874)
Q Consensus 257 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~------------- 322 (874)
.....+...+... .||+++.++......+. .+++||||+||+|.++|...
T Consensus 94 ~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~ 157 (333)
T 2i1m_A 94 EALMSELKIMSHLGQHENIVNLLGACTHGGP----------------VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157 (333)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEECSSSS----------------CEEEEECCTTEEHHHHHHHHHHHHSCC------
T ss_pred HHHHHHHHHHHhhcCCCCeeeEEEEEecCCc----------------eEEEEecCCCCcHHHHHHHhccccccccccccc
Confidence 3344555666666 89999998876543332 25799999999999999753
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchh
Q 002843 323 GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEE 402 (874)
Q Consensus 323 ~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei 402 (874)
...+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 158 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------ 219 (333)
T 2i1m_A 158 NSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN------------------ 219 (333)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTT------------------
T ss_pred ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccc------------------
Confidence 23689999999999999999999999999999999999999999999999999874330000
Q ss_pred hhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccc
Q 002843 403 EMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTA 482 (874)
Q Consensus 403 ~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~ 482 (874)
T Consensus 220 -------------------------------------------------------------------------------- 219 (333)
T 2i1m_A 220 -------------------------------------------------------------------------------- 219 (333)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH---HHHHHHhhcCCCCCCCCCCCHHH
Q 002843 483 QQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL---AAAMSDLRDRILPPSFLSENPKE 558 (874)
Q Consensus 483 ~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~---~~~~~~l~~~~lpp~~~~~~p~l 558 (874)
........||+.|+|||++.+..++.++|||||||++|||++ |..||... ......+.....++......+.+
T Consensus 220 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 296 (333)
T 2i1m_A 220 ---YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNI 296 (333)
T ss_dssp ---SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHH
T ss_pred ---eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHH
Confidence 000023456789999999998899999999999999999998 88887431 12222333333333333446779
Q ss_pred HHHHHHccccCCCCCCChhHHhhh
Q 002843 559 AGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 559 ~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.+|+.+||+.||.+|||+.|++++
T Consensus 297 ~~li~~~l~~~p~~Rps~~~l~~~ 320 (333)
T 2i1m_A 297 YSIMQACWALEPTHRPTFQQICSF 320 (333)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHhccChhhCcCHHHHHHH
Confidence 999999999999999999999864
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=288.01 Aligned_cols=201 Identities=14% Similarity=0.106 Sum_probs=149.8
Q ss_pred cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH--
Q 002843 269 NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHH-- 346 (874)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLH-- 346 (874)
..||+++.++.......... ...+++||||+||+|.++++.. .+++..++.|+.||+.||+|||
T Consensus 59 l~h~niv~~~~~~~~~~~~~------------~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~ 124 (301)
T 3q4u_A 59 LRHENILGFIASDMTSRHSS------------TQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIE 124 (301)
T ss_dssp CCCTTBCCEEEEEEEEETTE------------EEEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSC
T ss_pred ccCcCeeeEEEeeccccCCC------------ceeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHh
Confidence 68999998877644221110 0125799999999999999654 6999999999999999999999
Q ss_pred ------HCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 347 ------TQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 347 ------s~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
++||+||||||+|||++.++.+||+|||+++.......
T Consensus 125 ~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~------------------------------------ 168 (301)
T 3q4u_A 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN------------------------------------ 168 (301)
T ss_dssp BCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTT------------------------------------
T ss_pred hhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeecccccc------------------------------------
Confidence 99999999999999999999999999999874331000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
..........||+.|+|
T Consensus 169 ---------------------------------------------------------------~~~~~~~~~~gt~~y~a 185 (301)
T 3q4u_A 169 ---------------------------------------------------------------QLDVGNNPRVGTKRYMA 185 (301)
T ss_dssp ---------------------------------------------------------------EEECCCCCCCCCGGGCC
T ss_pred ---------------------------------------------------------------cccccccccccccceeC
Confidence 00000024578999999
Q ss_pred cccccCC------CCCCccchhHHHHHHHHhcCC----------CCchHHH-------HHHHHHhhcCCCCCCCCC----
Q 002843 501 PEELSGG------VCTTSSNIYSLGVLFFELFGR----------FDSERAL-------AAAMSDLRDRILPPSFLS---- 553 (874)
Q Consensus 501 PEvl~g~------~ys~kSDIwSLGVIL~ELltG----------~~p~~~~-------~~~~~~l~~~~lpp~~~~---- 553 (874)
||++.+. .++.++|||||||++|||++| ..||... ......+......+.+..
T Consensus 186 PE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (301)
T 3q4u_A 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFS 265 (301)
T ss_dssp HHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGG
T ss_pred hhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhcc
Confidence 9999886 456799999999999999999 7776321 111222222222222221
Q ss_pred --CCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 554 --ENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 554 --~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
..+.+.+|+.+||+.||++|||+.|+++.
T Consensus 266 ~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 296 (301)
T 3q4u_A 266 DPTLTSLAKLMKECWYQNPSARLTALRIKKT 296 (301)
T ss_dssp SHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred CccHHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 12558899999999999999999999764
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=290.45 Aligned_cols=204 Identities=17% Similarity=0.103 Sum_probs=161.9
Q ss_pred HHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--------------
Q 002843 259 KAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-------------- 323 (874)
Q Consensus 259 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-------------- 323 (874)
...+...+... .||+++.++......+.. +++||||+|++|.+++....
T Consensus 72 ~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 135 (327)
T 1fvr_A 72 FAGELEVLCKLGHHPNIINLLGACEHRGYL----------------YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 135 (327)
T ss_dssp HHHHHHHHTTCCCCTTBCCEEEEEEETTEE----------------EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTB
T ss_pred HHHHHHHHHhccCCCchhhhceeeeeCCce----------------EEEEecCCCCCHHHHHHhcccccccccccccccc
Confidence 44455566666 899999988876544332 46999999999999997653
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchh
Q 002843 324 -HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEE 402 (874)
Q Consensus 324 -~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei 402 (874)
..+++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 136 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~-------------------- 195 (327)
T 1fvr_A 136 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY-------------------- 195 (327)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEE--------------------
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCcccccc--------------------
Confidence 36999999999999999999999999999999999999999999999999987632200
Q ss_pred hhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccc
Q 002843 403 EMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTA 482 (874)
Q Consensus 403 ~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~ 482 (874)
T Consensus 196 -------------------------------------------------------------------------------- 195 (327)
T 1fvr_A 196 -------------------------------------------------------------------------------- 195 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHH
Q 002843 483 QQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEA 559 (874)
Q Consensus 483 ~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~ 559 (874)
.......+++.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....++......+.+.
T Consensus 196 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 271 (327)
T 1fvr_A 196 ----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVY 271 (327)
T ss_dssp ----CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHH
T ss_pred ----ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCCCCCCCHHHH
Confidence 00023355779999999998889999999999999999998 9988843 2233445555444444445568899
Q ss_pred HHHHHccccCCCCCCChhHHhhh
Q 002843 560 GFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 560 dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+||.+||..||.+|||+.|++++
T Consensus 272 ~li~~~l~~dp~~Rps~~ell~~ 294 (327)
T 1fvr_A 272 DLMRQCWREKPYERPSFAQILVS 294 (327)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999999999886
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=287.66 Aligned_cols=211 Identities=15% Similarity=0.127 Sum_probs=158.4
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
.....++....||+++.++.....+.. .+++|||| |+.+..++......+++..++.++.||+
T Consensus 72 ~~~~~~~~~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 134 (318)
T 2dyl_A 72 MDLDVVLKSHDCPYIVQCFGTFITNTD----------------VFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIV 134 (318)
T ss_dssp HHHHHHHHTTTCTTBCCEEEEEECSSE----------------EEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCceeeEEEEEecCCc----------------EEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 344456778889999998887654332 25699999 5677777765445799999999999999
Q ss_pred HHHHHHHHC-CCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 340 ALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 340 ~aL~yLHs~-gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
.||.|||++ ||+||||||+|||++.++.+||+|||+++.....
T Consensus 135 ~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~------------------------------------ 178 (318)
T 2dyl_A 135 KALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD------------------------------------ 178 (318)
T ss_dssp HHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC------------------------------------------
T ss_pred HHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC------------------------------------
Confidence 999999995 9999999999999999999999999988643200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.......||+.|
T Consensus 179 --------------------------------------------------------------------~~~~~~~~~~~y 190 (318)
T 2dyl_A 179 --------------------------------------------------------------------KAKDRSAGCAAY 190 (318)
T ss_dssp ----------------------------------------------------------------------------CCTT
T ss_pred --------------------------------------------------------------------ccccccCCCccc
Confidence 000234688999
Q ss_pred cCccccc-----CCCCCCccchhHHHHHHHHhcCCCCchHH---HHHHHHHhhcCCC--CCCCCCCCHHHHHHHHHcccc
Q 002843 499 ASPEELS-----GGVCTTSSNIYSLGVLFFELFGRFDSERA---LAAAMSDLRDRIL--PPSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 499 ~APEvl~-----g~~ys~kSDIwSLGVIL~ELltG~~p~~~---~~~~~~~l~~~~l--pp~~~~~~p~l~dLi~~cL~~ 568 (874)
+|||++. +..++.++|||||||++|||++|..||.. ....+..+..... .+......+.+.+||.+||+.
T Consensus 191 ~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 270 (318)
T 2dyl_A 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTK 270 (318)
T ss_dssp CCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCS
T ss_pred cChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccC
Confidence 9999995 45689999999999999999999988853 2222333333222 222334568899999999999
Q ss_pred CCCCCCChhHHhhhHHHHhhHhh
Q 002843 569 EPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
||.+||++.++|+||||+.....
T Consensus 271 dp~~Rps~~~ll~h~~~~~~~~~ 293 (318)
T 2dyl_A 271 DHRKRPKYNKLLEHSFIKRYETL 293 (318)
T ss_dssp CTTTSCCHHHHTTSHHHHHHHHS
T ss_pred ChhHCcCHHHHhhCHHHHhcccc
Confidence 99999999999999999976543
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=291.13 Aligned_cols=210 Identities=11% Similarity=0.095 Sum_probs=148.7
Q ss_pred HHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHH
Q 002843 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (874)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~y 344 (874)
.+....||+++.++.......... ....+++||||+||+|.+++.... +++..++.|+.||+.||+|
T Consensus 60 ~~~~~~h~~i~~~~~~~~~~~~~~-----------~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~ 126 (336)
T 3g2f_A 60 RVPLMEHDNIARFIVGDERVTADG-----------RMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAY 126 (336)
T ss_dssp TSTTCCCTTBCCEEEEEEEECTTS-----------CEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCcchhhheecccccccCC-----------CceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHH
Confidence 344578999988875422111100 001257999999999999998764 6999999999999999999
Q ss_pred HHHC---------CCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 345 HHTQ---------GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 345 LHs~---------gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
||++ ||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 127 LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~------------------------------- 175 (336)
T 3g2f_A 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL------------------------------- 175 (336)
T ss_dssp HHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSC-------------------------------
T ss_pred HHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccc-------------------------------
Confidence 9999 999999999999999999999999999875431100
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
.. ...........+||
T Consensus 176 -------------------------~~---------------------------------------~~~~~~~~~~~~gt 191 (336)
T 3g2f_A 176 -------------------------VR---------------------------------------PGEEDNAAISEVGT 191 (336)
T ss_dssp -------------------------C------------------------------------------------CCTTSC
T ss_pred -------------------------cC---------------------------------------ccccccccccCCCc
Confidence 00 00000011355799
Q ss_pred ccccCcccccC-------CCCCCccchhHHHHHHHHhcCCCCchHH--------------------HHHHHHHhhcCCCC
Q 002843 496 KWYASPEELSG-------GVCTTSSNIYSLGVLFFELFGRFDSERA--------------------LAAAMSDLRDRILP 548 (874)
Q Consensus 496 ~~Y~APEvl~g-------~~ys~kSDIwSLGVIL~ELltG~~p~~~--------------------~~~~~~~l~~~~lp 548 (874)
+.|+|||++.+ ..++.++|||||||++|||++|..|+.. .......+......
T Consensus 192 ~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (336)
T 3g2f_A 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQR 271 (336)
T ss_dssp GGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCC
T ss_pred cceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccC
Confidence 99999999987 3567899999999999999999555411 00111112222222
Q ss_pred CCC----CCCC---HHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 549 PSF----LSEN---PKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 549 p~~----~~~~---p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+.+ .... +.+.+||.+||+.||++|||+.|+++.
T Consensus 272 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~ 312 (336)
T 3g2f_A 272 PKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEER 312 (336)
T ss_dssp CCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred CCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHH
Confidence 222 2211 358999999999999999999999753
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-31 Score=302.96 Aligned_cols=248 Identities=15% Similarity=0.088 Sum_probs=183.5
Q ss_pred ccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCC
Q 002843 196 LSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKP 274 (874)
Q Consensus 196 ~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~ 274 (874)
+.++.+.. +.|.+++| |.||+|...+ ....+++.++.. .........+..++....||++
T Consensus 185 i~~~~~~~~~~lG~G~f------------g~V~~~~~~~------~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i 245 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQF------------GEVWMATYNK------HTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKL 245 (454)
T ss_dssp CCGGGEEEEEEEECCSS------------EEEEEEEETT------TEEEEEEEECTT-SBCHHHHHHHHHHHTTCCCTTB
T ss_pred echHHeEEEEEcccCCc------------eEEEEEEECC------ccEEEEEEecCC-CccHHHHHHHHHHHhhCCCCCE
Confidence 34445544 66666644 6788886321 111223333332 2344556677788888999999
Q ss_pred ceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002843 275 VGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFL 353 (874)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL~yLHs~gIIHR 353 (874)
+.+..... +. ..+++||||+||+|.++|... +..+++.+++.|+.||+.||+|||++||+||
T Consensus 246 v~l~~~~~-~~----------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHr 308 (454)
T 1qcf_A 246 VKLHAVVT-KE----------------PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 308 (454)
T ss_dssp CCEEEEEC-SS----------------SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred eeEEEEEe-CC----------------ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCC
Confidence 98876532 11 125799999999999999753 2268999999999999999999999999999
Q ss_pred CCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCc
Q 002843 354 DLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSK 433 (874)
Q Consensus 354 DLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~ 433 (874)
||||+|||++.++.+||+|||+++.......
T Consensus 309 Dlkp~Nill~~~~~~kl~DFG~a~~~~~~~~------------------------------------------------- 339 (454)
T 1qcf_A 309 DLRAANILVSASLVCKIADFGLARVIEDNEY------------------------------------------------- 339 (454)
T ss_dssp SCSGGGEEECTTCCEEECSTTGGGGBCCHHH-------------------------------------------------
T ss_pred CCCHHHEEECCCCcEEEeeCCCceEcCCCce-------------------------------------------------
Confidence 9999999999999999999999875431000
Q ss_pred cCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCcc
Q 002843 434 YGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSS 513 (874)
Q Consensus 434 ~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kS 513 (874)
.......+|..|+|||++.+..++.++
T Consensus 340 -----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~ 366 (454)
T 1qcf_A 340 -----------------------------------------------------TAREGAKFPIKWTAPEAINFGSFTIKS 366 (454)
T ss_dssp -----------------------------------------------------HTTCSSSSCGGGSCHHHHHHCCCCHHH
T ss_pred -----------------------------------------------------eccCCCcccccccCHHHhccCCCCcHH
Confidence 000123456789999999988999999
Q ss_pred chhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 514 NIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 514 DIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
|||||||+||||++ |..||.. .......+......+......+.+.+||.+||+.||++|||+.+|+.
T Consensus 367 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 99999999999999 9888843 22334445554444444556678999999999999999999999864
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=291.79 Aligned_cols=216 Identities=15% Similarity=0.208 Sum_probs=163.3
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+.......+.... ....+++|||++ ++|.+++.. .+++.+++.++.
T Consensus 68 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~----------~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~ 133 (353)
T 3coi_A 68 KRAYRELLLLKHMQHENVIGLLDVFTPASSLRN----------FYDFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVY 133 (353)
T ss_dssp HHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG----------CCCCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcccHhheEeccccccc----------ceeEEEEecccc-CCHHHHhcC---CCCHHHHHHHHH
Confidence 345566677888889999988877553332110 011368999998 599888743 599999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 134 qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~----------------------------------- 178 (353)
T 3coi_A 134 QMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA----------------------------------- 178 (353)
T ss_dssp HHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--------------------------------------
T ss_pred HHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCC-----------------------------------
Confidence 999999999999999999999999999999999999998763220
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
......||+
T Consensus 179 -----------------------------------------------------------------------~~~~~~~t~ 187 (353)
T 3coi_A 179 -----------------------------------------------------------------------EMTGYVVTR 187 (353)
T ss_dssp ----------------------------------------------------------------------------CCSB
T ss_pred -----------------------------------------------------------------------CccccccCc
Confidence 002346789
Q ss_pred cccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc-----------------------------
Q 002843 497 WYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD----------------------------- 544 (874)
Q Consensus 497 ~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~----------------------------- 544 (874)
+|+|||++.+ ..++.++|||||||++|||++|..||.... ..+..+..
T Consensus 188 ~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
T 3coi_A 188 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP 267 (353)
T ss_dssp CCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCS
T ss_pred CcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCC
Confidence 9999999987 568999999999999999999998874211 11111100
Q ss_pred -CCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 545 -RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 545 -~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
..++..+....+.+.+||.+||++||.+|||+.|+|+||||+......
T Consensus 268 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~ 316 (353)
T 3coi_A 268 RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE 316 (353)
T ss_dssp SCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCGG
T ss_pred CccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccCcc
Confidence 011122234567899999999999999999999999999999765543
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-31 Score=282.69 Aligned_cols=182 Identities=13% Similarity=0.071 Sum_probs=142.0
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCc-----EEEeccccchh
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ-----VKYIGPIIQKE 378 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~-----vKLiDFGlar~ 378 (874)
+++|||+ |++|.+++...+..+++.+++.|+.||+.||+|||++||+||||||+|||++.++. +||+|||+++.
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred EEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 5799999 99999999887667999999999999999999999999999999999999987766 99999999875
Q ss_pred ccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCC
Q 002843 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (874)
Q Consensus 379 ~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~ 458 (874)
....... .
T Consensus 161 ~~~~~~~-----------------------------------------------------~------------------- 168 (298)
T 1csn_A 161 YRDPVTK-----------------------------------------------------Q------------------- 168 (298)
T ss_dssp SBCTTTC-----------------------------------------------------C-------------------
T ss_pred ccccccc-----------------------------------------------------c-------------------
Confidence 4311000 0
Q ss_pred cccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH----
Q 002843 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA---- 534 (874)
Q Consensus 459 ~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~---- 534 (874)
...........||+.|+|||++.+..++.++|||||||++|||++|..||..
T Consensus 169 ------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 224 (298)
T 1csn_A 169 ------------------------HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 224 (298)
T ss_dssp ------------------------BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC
T ss_pred ------------------------cccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc
Confidence 0000011356799999999999998999999999999999999999999843
Q ss_pred -HHHHHHHhhc----CCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 535 -LAAAMSDLRD----RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 535 -~~~~~~~l~~----~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
....+..+.. ...+.......+.+.+|+.+||..||.+||++.+|++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~ 277 (298)
T 1csn_A 225 TNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL 277 (298)
T ss_dssp CHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred ccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 1222222222 11111223445789999999999999999999998654
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=280.89 Aligned_cols=218 Identities=14% Similarity=0.102 Sum_probs=166.0
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYI 334 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I 334 (874)
......+..++....||+++.++.......... .+++||||+++ |.+++... ...+++.+++.|
T Consensus 50 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~--------------~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~ 114 (305)
T 2wtk_C 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK--------------MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGY 114 (305)
T ss_dssp HHHHHHHHHHHTTCCCTTBCCEEEEEECC---C--------------EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe--------------EEEEehhccCC-HHHHHHhCcccccCHHHHHHH
Confidence 344556667788889999999887653222111 26799999976 88888653 347999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 115 ~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~------------------------------ 164 (305)
T 2wtk_C 115 FCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA------------------------------ 164 (305)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCS------------------------------
T ss_pred HHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcccc------------------------------
Confidence 99999999999999999999999999999999999999999864320000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
........|
T Consensus 165 -----------------------------------------------------------------------~~~~~~~~~ 173 (305)
T 2wtk_C 165 -----------------------------------------------------------------------DDTCRTSQG 173 (305)
T ss_dssp -----------------------------------------------------------------------SCEECCCCS
T ss_pred -----------------------------------------------------------------------ccccccCCC
Confidence 000023468
Q ss_pred cccccCcccccCCC--CCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCC
Q 002843 495 EKWYASPEELSGGV--CTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 495 T~~Y~APEvl~g~~--ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP 570 (874)
|+.|+|||++.+.. ++.++|||||||++|||++|..||.. .......+..... +......+.+.+||.+||+.||
T Consensus 174 ~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~l~~li~~~l~~dp 252 (305)
T 2wtk_C 174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSY-AIPGDCGPPLSDLLKGMLEYEP 252 (305)
T ss_dssp CGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC-CCCSSSCHHHHHHHHHHTCSST
T ss_pred CCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCC-CCCCccCHHHHHHHHHHccCCh
Confidence 89999999998744 47899999999999999999988743 2223333433322 1122345778999999999999
Q ss_pred CCCCChhHHhhhHHHHhhHh
Q 002843 571 LSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 571 ~~RPTa~EiL~hp~~~~~~~ 590 (874)
.+|||+.|+|+||||+....
T Consensus 253 ~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 253 AKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp TTSCCHHHHHHSHHHHSCCC
T ss_pred hhCCCHHHHhcCcccccCCC
Confidence 99999999999999986543
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-31 Score=287.62 Aligned_cols=209 Identities=13% Similarity=0.071 Sum_probs=159.8
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---CCCCHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---HKGKRIECLYI 334 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---~~lse~e~~~I 334 (874)
....+..++....||+++.++........ .+++||||+|++|.+++.... ..+++..++.|
T Consensus 73 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i 136 (326)
T 3uim_A 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTE----------------RLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136 (326)
T ss_dssp HHHHHHHGGGTCCCTTBCCCCEEECCSSC----------------CEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHH
T ss_pred HHHHHHHHHHhccCCCccceEEEEecCCc----------------eEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHH
Confidence 34556667788889999988876543322 257999999999999998643 25999999999
Q ss_pred HHHHHHHHHHHHHC---CCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchh
Q 002843 335 FRQIVALVDYHHTQ---GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (874)
Q Consensus 335 ~~QIl~aL~yLHs~---gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~ 411 (874)
+.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++......
T Consensus 137 ~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------- 188 (326)
T 3uim_A 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD---------------------------- 188 (326)
T ss_dssp HHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSS----------------------------
T ss_pred HHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccc----------------------------
Confidence 99999999999999 99999999999999999999999999986432000
Q ss_pred hhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccc
Q 002843 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (874)
Q Consensus 412 ~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~ 491 (874)
......
T Consensus 189 --------------------------------------------------------------------------~~~~~~ 194 (326)
T 3uim_A 189 --------------------------------------------------------------------------THVTTA 194 (326)
T ss_dssp --------------------------------------------------------------------------SCEECC
T ss_pred --------------------------------------------------------------------------cccccc
Confidence 000124
Q ss_pred ccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHH----------HHHhhc-CCC----CCCCCCC--
Q 002843 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAA----------MSDLRD-RIL----PPSFLSE-- 554 (874)
Q Consensus 492 ~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~----------~~~l~~-~~l----pp~~~~~-- 554 (874)
..||+.|+|||++.+..++.++|||||||++|||++|..||...... ...+.. ..+ .......
T Consensus 195 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 3uim_A 195 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYK 274 (326)
T ss_dssp CCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCC
T ss_pred ccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccC
Confidence 46899999999999888999999999999999999999998532211 111111 111 1111111
Q ss_pred ---CHHHHHHHHHccccCCCCCCChhHHhhhHH
Q 002843 555 ---NPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (874)
Q Consensus 555 ---~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~ 584 (874)
.+.+.+|+.+||+.||.+|||+.|+++|-.
T Consensus 275 ~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 307 (326)
T 3uim_A 275 DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307 (326)
T ss_dssp HHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence 145889999999999999999999998854
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9e-31 Score=284.10 Aligned_cols=211 Identities=16% Similarity=0.189 Sum_probs=155.4
Q ss_pred HHHHhHHhhcC--CCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 260 AAGAMMVASNA--SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 260 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
..+...+.... +++++.++.....+.. .+++|| +.+++|.+++.... .+++.+++.|+.|
T Consensus 74 ~~E~~~l~~l~~~~~~iv~~~~~~~~~~~----------------~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~q 135 (313)
T 3cek_A 74 RNEIAYLNKLQQHSDKIIRLYDYEITDQY----------------IYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKN 135 (313)
T ss_dssp HHHHHHHHHHGGGCTTBCCEEEEEECSSE----------------EEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHH
T ss_pred HHHHHHHHhccccCCceEEEEEEeecCCE----------------EEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHH
Confidence 33444444444 5888888776553332 256999 66789999998876 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||++||+||||||+|||++ ++.+||+|||+++.......
T Consensus 136 i~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~--------------------------------- 181 (313)
T 3cek_A 136 MLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT--------------------------------- 181 (313)
T ss_dssp HHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC---------------------------------------
T ss_pred HHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCccc---------------------------------
Confidence 99999999999999999999999996 58999999999874330000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
........||+.
T Consensus 182 --------------------------------------------------------------------~~~~~~~~gt~~ 193 (313)
T 3cek_A 182 --------------------------------------------------------------------SVVKDSQVGTVN 193 (313)
T ss_dssp ----------------------------------------------------------------------------CCGG
T ss_pred --------------------------------------------------------------------cccccCCCCCCC
Confidence 000024568999
Q ss_pred ccCcccccC-----------CCCCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhhcCCCCCCCC-CCCHHHHHHH
Q 002843 498 YASPEELSG-----------GVCTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLRDRILPPSFL-SENPKEAGFC 562 (874)
Q Consensus 498 Y~APEvl~g-----------~~ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~~~~lpp~~~-~~~p~l~dLi 562 (874)
|+|||++.+ ..++.++|||||||++|||++|..||... ...+..+........+. .....+.+||
T Consensus 194 y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (313)
T 3cek_A 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 273 (313)
T ss_dssp GCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHH
T ss_pred cCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHH
Confidence 999999976 46889999999999999999999998532 12223333332222232 2346789999
Q ss_pred HHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 563 LWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 563 ~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.+||+.||.+||++.|+|+||||+....
T Consensus 274 ~~~l~~dp~~Rps~~ell~h~~~~~~~~ 301 (313)
T 3cek_A 274 KCCLKRDPKQRISIPELLAHPYVQIQTH 301 (313)
T ss_dssp HHHTCSSTTTSCCHHHHHTSHHHHCC--
T ss_pred HHHccCCcccCcCHHHHhcCccccCCCC
Confidence 9999999999999999999999986443
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-31 Score=286.75 Aligned_cols=252 Identities=16% Similarity=0.109 Sum_probs=179.3
Q ss_pred EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceee
Q 002843 204 KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVS 283 (874)
Q Consensus 204 ~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 283 (874)
+.|.+++| |.||++.+.. .....+...+.+.+.............+...+....||+++.+......
T Consensus 47 ~~lg~G~~------------g~V~~~~~~~-~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 113 (326)
T 2w1i_A 47 QQLGKGNF------------GSVEMCRYDP-LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 113 (326)
T ss_dssp EEEECCSS------------EEEEEEEECT-TSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC
T ss_pred eeeccCCC------------eEEEEEEecc-ccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe
Confidence 66666654 6677765210 0011122223333333333333445566677888889999988776443
Q ss_pred cCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEe
Q 002843 284 NGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (874)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~ 363 (874)
.+... .+++||||+|++|.+++......+++.+++.++.||+.||.|||++||+||||||+|||++
T Consensus 114 ~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~ 179 (326)
T 2w1i_A 114 AGRRN--------------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 179 (326)
T ss_dssp ----C--------------CEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE
T ss_pred cCCCc--------------eEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEc
Confidence 22111 2679999999999999988765799999999999999999999999999999999999999
Q ss_pred cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccc
Q 002843 364 QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (874)
Q Consensus 364 ~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~ 443 (874)
.++.+||+|||+++.......
T Consensus 180 ~~~~~kL~Dfg~~~~~~~~~~----------------------------------------------------------- 200 (326)
T 2w1i_A 180 NENRVKIGDFGLTKVLPQDKE----------------------------------------------------------- 200 (326)
T ss_dssp ETTEEEECCCTTCEECCSSCS-----------------------------------------------------------
T ss_pred CCCcEEEecCcchhhcccccc-----------------------------------------------------------
Confidence 999999999999874330000
Q ss_pred cccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHH
Q 002843 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFF 523 (874)
Q Consensus 444 ~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ 523 (874)
. ........++..|+|||++.+..++.++|||||||++|
T Consensus 201 -~----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 239 (326)
T 2w1i_A 201 -Y----------------------------------------YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 239 (326)
T ss_dssp -E----------------------------------------EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred -c----------------------------------------cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHH
Confidence 0 00002345677899999999888999999999999999
Q ss_pred HhcCCCCchHHHHH------------------HHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 524 ELFGRFDSERALAA------------------AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 524 ELltG~~p~~~~~~------------------~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
||++|..|+..... ....+.....++......+.+.+||.+||..||.+|||+.|+++.
T Consensus 240 el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~ 316 (326)
T 2w1i_A 240 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR 316 (326)
T ss_dssp HHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999887643211 112223333333444556789999999999999999999999753
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-31 Score=282.16 Aligned_cols=212 Identities=13% Similarity=0.057 Sum_probs=154.0
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+...+....|++.+..+.....++.. .+++|||| |++|.+++......+++.+++.|+.||
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~~~---------------~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi 114 (296)
T 3uzp_A 51 LHIESKIYKMMQGGVGIPTIRWCGAEGDY---------------NVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQM 114 (296)
T ss_dssp HHHHHHHHHHHTTSTTCCCEEEEEEETTE---------------EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCccccccCCCCc---------------eEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHH
Confidence 33445556666676655544332222211 25799999 899999998655589999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEe---cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLL---QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~---~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
+.||+|||++||+||||||+|||++ .++.+||+|||+++........
T Consensus 115 ~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------ 164 (296)
T 3uzp_A 115 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH------------------------------ 164 (296)
T ss_dssp HHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC------------------------------
T ss_pred HHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc------------------------------
Confidence 9999999999999999999999994 7889999999998754311000
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
. ..+........||
T Consensus 165 -----------------------~-------------------------------------------~~~~~~~~~~~gt 178 (296)
T 3uzp_A 165 -----------------------Q-------------------------------------------HIPYRENKNLTGT 178 (296)
T ss_dssp -----------------------C-------------------------------------------BCCCCCSCCCCSC
T ss_pred -----------------------c-------------------------------------------ccccccccccccc
Confidence 0 0000001356789
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH-----HHHHHhhc----CCCCCCCCCCCHHHHHHHHHcc
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA-----AAMSDLRD----RILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~-----~~~~~l~~----~~lpp~~~~~~p~l~dLi~~cL 566 (874)
+.|+|||++.+..++.++|||||||++|||++|..||.... ..+..+.. ...+......++.+.+|+.+||
T Consensus 179 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 258 (296)
T 3uzp_A 179 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR 258 (296)
T ss_dssp TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred cccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHH
Confidence 99999999999899999999999999999999999985310 01111111 1111111334577999999999
Q ss_pred ccCCCCCCChhHHhhh
Q 002843 567 HPEPLSRPTTREILQS 582 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~h 582 (874)
+.||.+|||+.++++.
T Consensus 259 ~~dp~~Rps~~~l~~~ 274 (296)
T 3uzp_A 259 SLRFDDKPDYSYLRQL 274 (296)
T ss_dssp TSCTTCCCCHHHHHHH
T ss_pred hcCcCcCCCHHHHHHH
Confidence 9999999999998763
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-31 Score=281.49 Aligned_cols=210 Identities=13% Similarity=0.068 Sum_probs=153.6
Q ss_pred HHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
..+...+....|++.+..+.....++.. .+++|||| |++|.+++......+++.+++.|+.||+
T Consensus 52 ~~e~~~l~~l~~~~~i~~~~~~~~~~~~---------------~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~ 115 (296)
T 4hgt_A 52 HIESKIYKMMQGGVGIPTIRWCGAEGDY---------------NVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMI 115 (296)
T ss_dssp HHHHHHHHHHTTSTTCCCEEEEEEETTE---------------EEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCeeeeecCCCCc---------------eEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 3344455556666655554433222221 25799999 8999999987655899999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEE---ecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKL---LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL---~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
.||+|||++||+||||||+|||+ +.++.+||+|||+++........
T Consensus 116 ~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~------------------------------- 164 (296)
T 4hgt_A 116 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH------------------------------- 164 (296)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC-------------------------------
T ss_pred HHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC-------------------------------
Confidence 99999999999999999999999 78899999999998754311000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
. ..+........||+
T Consensus 165 ----------------------~-------------------------------------------~~~~~~~~~~~gt~ 179 (296)
T 4hgt_A 165 ----------------------Q-------------------------------------------HIPYRENKNLTGTA 179 (296)
T ss_dssp ----------------------C-------------------------------------------BCCCCCSCCCCSCG
T ss_pred ----------------------c-------------------------------------------cCCCCcccccCCCc
Confidence 0 00000113567899
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH-----HHHHHhhc----CCCCCCCCCCCHHHHHHHHHccc
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA-----AAMSDLRD----RILPPSFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~-----~~~~~l~~----~~lpp~~~~~~p~l~dLi~~cL~ 567 (874)
.|+|||++.+..++.++|||||||++|||++|..||.... ..+..+.. ...+......++.+.+|+.+||+
T Consensus 180 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 259 (296)
T 4hgt_A 180 RYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRS 259 (296)
T ss_dssp GGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHT
T ss_pred cccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999984310 01111111 11111113345779999999999
Q ss_pred cCCCCCCChhHHhh
Q 002843 568 PEPLSRPTTREILQ 581 (874)
Q Consensus 568 ~dP~~RPTa~EiL~ 581 (874)
.||++|||+.++++
T Consensus 260 ~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 260 LRFDDKPDYSYLRQ 273 (296)
T ss_dssp SCTTCCCCHHHHHH
T ss_pred cCCCCCCCHHHHHH
Confidence 99999999999976
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-31 Score=287.21 Aligned_cols=238 Identities=18% Similarity=0.101 Sum_probs=171.1
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
|.|.||+|...+ ....+.+.+.+...........+...+....||+++.++.....++.
T Consensus 51 ~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--------------- 109 (321)
T 2qkw_B 51 VFGKVYKGVLRD------GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE--------------- 109 (321)
T ss_dssp SSSEEEEEECTT------CCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC---------------
T ss_pred CCeeEEEEEECC------CCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe---------------
Confidence 447788886321 11222223333333344455666677888889999988876442222
Q ss_pred CCceEeeccCCCCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchh
Q 002843 302 GGLRQGSSDHGVNLREWLNARG---HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~---~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~ 378 (874)
.+++||||+|++|.+++.... ..+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 110 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 110 -MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK 188 (321)
T ss_dssp -CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred -EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 357999999999999996543 2599999999999999999999999999999999999999999999999999863
Q ss_pred ccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCC
Q 002843 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (874)
Q Consensus 379 ~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~ 458 (874)
......
T Consensus 189 ~~~~~~-------------------------------------------------------------------------- 194 (321)
T 2qkw_B 189 GTELDQ-------------------------------------------------------------------------- 194 (321)
T ss_dssp CSSSSC--------------------------------------------------------------------------
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 220000
Q ss_pred cccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH---
Q 002843 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--- 535 (874)
Q Consensus 459 ~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--- 535 (874)
........||+.|+|||++.+..++.++|||||||++|||++|..||...
T Consensus 195 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~ 247 (321)
T 2qkw_B 195 ---------------------------THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247 (321)
T ss_dssp ---------------------------CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS
T ss_pred ---------------------------cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH
Confidence 00002456899999999999889999999999999999999998886321
Q ss_pred ------HHHHHHhhc----CCCCCCCCCC-----CHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 536 ------AAAMSDLRD----RILPPSFLSE-----NPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 536 ------~~~~~~l~~----~~lpp~~~~~-----~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
......... ..+.+..... ...+.+|+.+||+.||++|||+.|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 309 (321)
T 2qkw_B 248 EMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309 (321)
T ss_dssp SCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 000111111 1112222111 1357899999999999999999999876
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=9.2e-31 Score=287.22 Aligned_cols=208 Identities=17% Similarity=0.128 Sum_probs=162.8
Q ss_pred HHHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC------------
Q 002843 258 LKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH------------ 324 (874)
Q Consensus 258 ~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~------------ 324 (874)
....+..++... .||+++.++.....++. .+++||||+|++|.+++.....
T Consensus 86 ~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 149 (334)
T 2pvf_A 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGP----------------LYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149 (334)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEECSSSC----------------CEEEEECCTTCBHHHHHHTTSCTTCCSCC-----
T ss_pred HHHHHHHHHHHhhcCCCEeeEEEEEccCCc----------------eEEEEECCCCCcHHHHHHHhcccccccccccccc
Confidence 344555556555 89999998876543332 2579999999999999986531
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccch
Q 002843 325 ---KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAE 401 (874)
Q Consensus 325 ---~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~e 401 (874)
.+++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 150 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~----------------- 212 (334)
T 2pvf_A 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY----------------- 212 (334)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSS-----------------
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcccccccccccccc-----------------
Confidence 489999999999999999999999999999999999999999999999999864330000
Q ss_pred hhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccc
Q 002843 402 EEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNT 481 (874)
Q Consensus 402 i~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~ 481 (874)
T Consensus 213 -------------------------------------------------------------------------------- 212 (334)
T 2pvf_A 213 -------------------------------------------------------------------------------- 212 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHH
Q 002843 482 AQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKE 558 (874)
Q Consensus 482 ~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l 558 (874)
........+|+.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....++......+.+
T Consensus 213 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (334)
T 2pvf_A 213 ----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNEL 288 (334)
T ss_dssp ----EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHH
T ss_pred ----ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHH
Confidence 000023456789999999998889999999999999999999 8888743 223344444444444444556789
Q ss_pred HHHHHHccccCCCCCCChhHHhhh
Q 002843 559 AGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 559 ~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.+||.+||+.||.+||++.|++++
T Consensus 289 ~~li~~~l~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 289 YMMMRDCWHAVPSQRPTFKQLVED 312 (334)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999999999999999875
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=295.55 Aligned_cols=201 Identities=18% Similarity=0.157 Sum_probs=150.0
Q ss_pred CCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC-
Q 002843 271 SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQ- 348 (874)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL~yLHs~- 348 (874)
|++++.++......+... ...+++|||+ |++|.+++... ...+++.+++.|+.||+.||+|||++
T Consensus 85 ~~~i~~~~~~~~~~~~~~------------~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ 151 (373)
T 1q8y_A 85 ANHILKLLDHFNHKGPNG------------VHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC 151 (373)
T ss_dssp HTTBCCCCEEEEEEETTE------------EEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cchHHHHHHHhhccCCCC------------ceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 677777777655332100 0126799999 89999999873 33699999999999999999999998
Q ss_pred CCcccCCCCCceEEecC------CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 349 GVTFLDLKPSSFKLLQS------NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 349 gIIHRDLKPsNILL~~~------~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
||+||||||+|||++.+ +.+||+|||+++....
T Consensus 152 ~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~----------------------------------------- 190 (373)
T 1q8y_A 152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE----------------------------------------- 190 (373)
T ss_dssp CEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB-----------------------------------------
T ss_pred CEEecCCChHHeEEeccCCCcCcceEEEcccccccccCC-----------------------------------------
Confidence 99999999999999643 3799999998863220
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
......||+.|+|||
T Consensus 191 -----------------------------------------------------------------~~~~~~~t~~y~aPE 205 (373)
T 1q8y_A 191 -----------------------------------------------------------------HYTNSIQTREYRSPE 205 (373)
T ss_dssp -----------------------------------------------------------------CCCSCCSCGGGCCHH
T ss_pred -----------------------------------------------------------------CCCCCCCCccccCcH
Confidence 002346889999999
Q ss_pred cccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--------HHHHHhhc--CCCCC-----------------------
Q 002843 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--------AAMSDLRD--RILPP----------------------- 549 (874)
Q Consensus 503 vl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--------~~~~~l~~--~~lpp----------------------- 549 (874)
++.+..++.++|||||||+||||++|..||.... ..+..+.. +.+|+
T Consensus 206 ~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 285 (373)
T 1q8y_A 206 VLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNIS 285 (373)
T ss_dssp HHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCC
T ss_pred HHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccc
Confidence 9999999999999999999999999999885322 11111111 11110
Q ss_pred ---------------CCC-CCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 550 ---------------SFL-SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 550 ---------------~~~-~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.+. ...+.+.+||.+||.+||.+|||+.|+|+||||+....
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 342 (373)
T 1q8y_A 286 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG 342 (373)
T ss_dssp CCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTT
T ss_pred cccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccC
Confidence 000 11245779999999999999999999999999997543
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-31 Score=289.22 Aligned_cols=208 Identities=13% Similarity=0.111 Sum_probs=158.4
Q ss_pred HHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Q 002843 261 AGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 261 ~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl 339 (874)
.+...+... .||+++.++........ .+++|||| |++|.+++......+++.+++.|+.||+
T Consensus 53 ~E~~~l~~l~~h~~i~~~~~~~~~~~~----------------~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~ 115 (330)
T 2izr_A 53 LEYRFYKQLGSGDGIPQVYYFGPCGKY----------------NAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLI 115 (330)
T ss_dssp HHHHHHHHHCSCTTSCCEEEEEEETTE----------------EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCCEEEEEEecCCc----------------cEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 344444555 89999888776554332 25699999 9999999987655899999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCCc-----EEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQ-----VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~~-----vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
.||+|||++||+||||||+|||++.++. +||+|||+++.......
T Consensus 116 ~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~------------------------------ 165 (330)
T 2izr_A 116 SRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET------------------------------ 165 (330)
T ss_dssp HHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT------------------------------
T ss_pred HHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC------------------------------
Confidence 9999999999999999999999998887 99999999875431100
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
.. ...........|
T Consensus 166 --------------------------~~----------------------------------------~~~~~~~~~~~g 179 (330)
T 2izr_A 166 --------------------------KK----------------------------------------HIPYREHKSLTG 179 (330)
T ss_dssp --------------------------CC----------------------------------------BCCCCCCCCCCS
T ss_pred --------------------------Cc----------------------------------------cccccccCCcCC
Confidence 00 000001135689
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH-----HHHHHHHhhc---CCCCCCCCCCCHHHHHHHHHcc
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA-----LAAAMSDLRD---RILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~-----~~~~~~~l~~---~~lpp~~~~~~p~l~dLi~~cL 566 (874)
|+.|+|||++.+..++.++|||||||+||||++|..||.. ....+..+.. ...++......|.+.+|+..||
T Consensus 180 t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l 259 (330)
T 2izr_A 180 TARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVR 259 (330)
T ss_dssp CTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHH
T ss_pred CccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999853 2222233222 1122222334568999999999
Q ss_pred ccCCCCCCChhHHhh
Q 002843 567 HPEPLSRPTTREILQ 581 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~ 581 (874)
..||.+||++.+|++
T Consensus 260 ~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 260 RLDFFEKPDYDYLRK 274 (330)
T ss_dssp HCCTTCCCCHHHHHH
T ss_pred hCCCCCCCCHHHHHH
Confidence 999999999999875
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-31 Score=280.33 Aligned_cols=210 Identities=15% Similarity=0.102 Sum_probs=164.7
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLY 333 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~ 333 (874)
.......+..++....||+++.++.....+.. .+++||||+|++|.+++.... ..+++..++.
T Consensus 52 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 115 (288)
T 3kfa_A 52 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP----------------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 115 (288)
T ss_dssp HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS----------------EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC----------------EEEEEEcCCCCcHHHHHHhcccCCccHhHHHH
Confidence 33445566678888889999988876543222 256999999999999998743 3699999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
|+.||+.||+|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 116 i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~----------------------------- 166 (288)
T 3kfa_A 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----------------------------- 166 (288)
T ss_dssp HHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS-----------------------------
T ss_pred HHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc-----------------------------
Confidence 999999999999999999999999999999999999999999864330000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
.......
T Consensus 167 -------------------------------------------------------------------------~~~~~~~ 173 (288)
T 3kfa_A 167 -------------------------------------------------------------------------TAHAGAK 173 (288)
T ss_dssp -------------------------------------------------------------------------EEETTEE
T ss_pred -------------------------------------------------------------------------ccccCCc
Confidence 0002345
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCC
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP 570 (874)
+|+.|+|||++.+..++.++|||||||++|+|++ |..||... ......+.....++......+.+.+|+.+||.+||
T Consensus 174 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp 253 (288)
T 3kfa_A 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253 (288)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred cccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCCh
Confidence 6789999999998899999999999999999999 88887431 12233344443344444556789999999999999
Q ss_pred CCCCChhHHhhh
Q 002843 571 LSRPTTREILQS 582 (874)
Q Consensus 571 ~~RPTa~EiL~h 582 (874)
.+|||+.++++.
T Consensus 254 ~~Rps~~~~~~~ 265 (288)
T 3kfa_A 254 SDRPSFAEIHQA 265 (288)
T ss_dssp GGSCCHHHHHHH
T ss_pred hhCcCHHHHHHH
Confidence 999999999653
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=292.38 Aligned_cols=193 Identities=16% Similarity=0.141 Sum_probs=155.6
Q ss_pred CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002843 270 ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHG-VNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ 348 (874)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~G-gsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~ 348 (874)
.|++++.++........ .+++|||+.+ ++|.+++...+ .+++.+++.|+.||+.||+|||++
T Consensus 106 ~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~ 168 (320)
T 3a99_A 106 GFSGVIRLLDWFERPDS----------------FVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNC 168 (320)
T ss_dssp SSCSBCCEEEEEECSSE----------------EEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceEEEEEEecCCc----------------EEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 36888888776553332 2569999986 99999998765 799999999999999999999999
Q ss_pred CCcccCCCCCceEEe-cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccccc
Q 002843 349 GVTFLDLKPSSFKLL-QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427 (874)
Q Consensus 349 gIIHRDLKPsNILL~-~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~ 427 (874)
||+||||||+|||++ .++.+||+|||+++.....
T Consensus 169 ~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~--------------------------------------------- 203 (320)
T 3a99_A 169 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--------------------------------------------- 203 (320)
T ss_dssp TEECCCCSGGGEEEETTTTEEEECCCTTCEECCSS---------------------------------------------
T ss_pred CcEeCCCCHHHEEEeCCCCCEEEeeCccccccccc---------------------------------------------
Confidence 999999999999999 6789999999988632200
Q ss_pred ccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC
Q 002843 428 SLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG 507 (874)
Q Consensus 428 ~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~ 507 (874)
......||+.|+|||++.+.
T Consensus 204 ------------------------------------------------------------~~~~~~gt~~y~aPE~~~~~ 223 (320)
T 3a99_A 204 ------------------------------------------------------------VYTDFDGTRVYSPPEWIRYH 223 (320)
T ss_dssp ------------------------------------------------------------CBCCCCSCGGGSCHHHHHHS
T ss_pred ------------------------------------------------------------cccCCCCCccCCChHHhccC
Confidence 00234688999999999876
Q ss_pred CC-CCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHH
Q 002843 508 VC-TTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (874)
Q Consensus 508 ~y-s~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~ 586 (874)
.+ +.++|||||||++|||++|..||....... ...... .....+.+.+||.+||+.||.+|||+.|+|+||||+
T Consensus 224 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~ 298 (320)
T 3a99_A 224 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII---RGQVFF--RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298 (320)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH---HCCCCC--SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred CCCCccchHHhHHHHHHHHHHCCCCCCChhhhh---cccccc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhc
Confidence 65 688999999999999999999986544322 111111 123457799999999999999999999999999998
Q ss_pred hhH
Q 002843 587 EFQ 589 (874)
Q Consensus 587 ~~~ 589 (874)
...
T Consensus 299 ~~~ 301 (320)
T 3a99_A 299 DVL 301 (320)
T ss_dssp SCC
T ss_pred Ccc
Confidence 654
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=311.31 Aligned_cols=211 Identities=13% Similarity=0.036 Sum_probs=165.3
Q ss_pred hhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHH
Q 002843 254 SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLY 333 (874)
Q Consensus 254 ~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~ 333 (874)
........+..++....||+++.++.....+ . .+++||||+||+|.++|......+++.+++.
T Consensus 378 ~~~~~~~~E~~il~~l~hpniv~l~~~~~~~-~----------------~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~ 440 (613)
T 2ozo_A 378 ADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-A----------------LMLVMEMAGGGPLHKFLVGKREEIPVSNVAE 440 (613)
T ss_dssp TTHHHHHHHHHHHTTCCCTTBCCEEEEEESS-S----------------EEEEEECCTTCBHHHHHTTCTTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCEeeEEEEeccC-C----------------eEEEEEeCCCCcHHHHHhhccCCCCHHHHHH
Confidence 3445567777888889999999998765421 1 2579999999999999987665799999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
|+.||+.||+|||++|||||||||+||||+.++.+||+|||+++.+.....
T Consensus 441 i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~----------------------------- 491 (613)
T 2ozo_A 441 LLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS----------------------------- 491 (613)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------------------------------
T ss_pred HHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc-----------------------------
Confidence 999999999999999999999999999999999999999999875431000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
. ........
T Consensus 492 --------------------------~---------------------------------------------~~~~~~~~ 500 (613)
T 2ozo_A 492 --------------------------Y---------------------------------------------YTARSAGK 500 (613)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------e---------------------------------------------eeeccCCC
Confidence 0 00001234
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCC
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP 570 (874)
+|+.|+|||++.+..|+.++|||||||+||||++ |..||.. ....+..+..+..++......+.+.+||.+||+.||
T Consensus 501 ~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP 580 (613)
T 2ozo_A 501 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKW 580 (613)
T ss_dssp -CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSST
T ss_pred CccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCh
Confidence 5679999999998899999999999999999998 9998843 222344455544444444566889999999999999
Q ss_pred CCCCChhHHhh
Q 002843 571 LSRPTTREILQ 581 (874)
Q Consensus 571 ~~RPTa~EiL~ 581 (874)
.+||++.+|++
T Consensus 581 ~~RPs~~~l~~ 591 (613)
T 2ozo_A 581 EDRPDFLTVEQ 591 (613)
T ss_dssp TTSCCHHHHHH
T ss_pred hHCcCHHHHHH
Confidence 99999999854
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-31 Score=280.43 Aligned_cols=204 Identities=14% Similarity=0.091 Sum_probs=156.9
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCC-CCCHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIF 335 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~-~lse~e~~~I~ 335 (874)
.....+...+....||+++.++.....+... .+++||||+|++|.+++...+. .+++.+++.++
T Consensus 59 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~---------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 123 (278)
T 1byg_A 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGG---------------LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 123 (278)
T ss_dssp HHHHHTHHHHTTCCCTTBCCEEEEECCC--C---------------CEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEEcCCCc---------------eEEEEecCCCCCHHHHHHhcccccCCHHHHHHHH
Confidence 3445566777888899999888764322211 2579999999999999976532 38999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
.||+.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 124 ~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--------------------------------- 170 (278)
T 1byg_A 124 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--------------------------------- 170 (278)
T ss_dssp HHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------------------------------------
T ss_pred HHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccccc---------------------------------
Confidence 99999999999999999999999999999999999999987632200
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
.....++
T Consensus 171 -------------------------------------------------------------------------~~~~~~~ 177 (278)
T 1byg_A 171 -------------------------------------------------------------------------QDTGKLP 177 (278)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred -------------------------------------------------------------------------ccCCCcc
Confidence 0122456
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
+.|+|||++.+..++.++|||||||++|||++ |..||... ......+.....++......+.+.+||.+||+.||.+
T Consensus 178 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 257 (278)
T 1byg_A 178 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAM 257 (278)
T ss_dssp TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred ccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhh
Confidence 78999999998889999999999999999998 88887432 2223344444333334455678999999999999999
Q ss_pred CCChhHHhh
Q 002843 573 RPTTREILQ 581 (874)
Q Consensus 573 RPTa~EiL~ 581 (874)
||++.|+++
T Consensus 258 Rps~~~l~~ 266 (278)
T 1byg_A 258 RPSFLQLRE 266 (278)
T ss_dssp SCCHHHHHH
T ss_pred CCCHHHHHH
Confidence 999999975
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-31 Score=302.21 Aligned_cols=211 Identities=17% Similarity=0.167 Sum_probs=148.0
Q ss_pred HHhHHh-hcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCC------CCHHHHHHH
Q 002843 262 GAMMVA-SNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHK------GKRIECLYI 334 (874)
Q Consensus 262 ~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~------lse~e~~~I 334 (874)
+..++. ...||+++.++.....+.. .+++||||+ |+|.+++...... .++.+++.|
T Consensus 58 E~~~l~~l~~HpnIv~~~~~~~~~~~----------------~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i 120 (434)
T 2rio_A 58 EIKLLTESDDHPNVIRYYCSETTDRF----------------LYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISL 120 (434)
T ss_dssp HHHHHHHHTTSTTBCCEEEEEECSSE----------------EEEEECCCS-EEHHHHHHTC------------CCHHHH
T ss_pred HHHHHHhccCCCCcCeEEEEEecCCe----------------EEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHH
Confidence 444444 4589999998776543332 256999997 5999999875421 133356789
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecC-------------CcEEEeccccchhccccccCCCCcchhhhhhcccch
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-------------NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAE 401 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~-------------~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~e 401 (874)
+.||+.||+|||++||+||||||+|||++.+ +.+||+|||+++.......
T Consensus 121 ~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~----------------- 183 (434)
T 2rio_A 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS----------------- 183 (434)
T ss_dssp HHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------------
T ss_pred HHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCc-----------------
Confidence 9999999999999999999999999999754 4799999999874331000
Q ss_pred hhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccc
Q 002843 402 EEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNT 481 (874)
Q Consensus 402 i~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~ 481 (874)
.
T Consensus 184 --------------------------------------~----------------------------------------- 184 (434)
T 2rio_A 184 --------------------------------------S----------------------------------------- 184 (434)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------c-----------------------------------------
Confidence 0
Q ss_pred ccccccccccccccccccCcccccC-------CCCCCccchhHHHHHHHHhcC-CCCchHHHHHHHHHhhcCC-CCCCCC
Q 002843 482 AQQQSTSVSEQLEEKWYASPEELSG-------GVCTTSSNIYSLGVLFFELFG-RFDSERALAAAMSDLRDRI-LPPSFL 552 (874)
Q Consensus 482 ~~~~~~~~t~~~GT~~Y~APEvl~g-------~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~~~~~~~l~~~~-lpp~~~ 552 (874)
.........||+.|+|||++.+ ..++.++|||||||++|||++ |..||.........+.... ..+...
T Consensus 185 ---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~ 261 (434)
T 2rio_A 185 ---FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMK 261 (434)
T ss_dssp -------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCT
T ss_pred ---ceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCccccc
Confidence 0000134579999999999976 568999999999999999999 8888843221122222222 111111
Q ss_pred C-----CCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 553 S-----ENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 553 ~-----~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
. ..+.+.+||.+||+.||.+|||+.|+|+||||...
T Consensus 262 ~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~~ 302 (434)
T 2rio_A 262 CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK 302 (434)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSCH
T ss_pred ccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCCc
Confidence 1 12568899999999999999999999999999753
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=279.76 Aligned_cols=207 Identities=14% Similarity=0.034 Sum_probs=162.3
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+...+....||+++.++.... +.. .+++|||++|++|.+++...+ .+++.+++.|+.
T Consensus 63 ~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ 124 (291)
T 1xbb_A 63 DELLAEANVMQQLDNPYIVRMIGICE-AES----------------WMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVH 124 (291)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEEE-SSS----------------EEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEEEEEC-CCC----------------cEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHH
Confidence 44556667788888999998887642 111 257999999999999998865 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 125 qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------- 172 (291)
T 1xbb_A 125 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN-------------------------------- 172 (291)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS--------------------------------
T ss_pred HHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC--------------------------------
Confidence 999999999999999999999999999999999999999864330000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.........+|+
T Consensus 173 --------------------------------------------------------------------~~~~~~~~~~~~ 184 (291)
T 1xbb_A 173 --------------------------------------------------------------------YYKAQTHGKWPV 184 (291)
T ss_dssp --------------------------------------------------------------------EEEC----CCCG
T ss_pred --------------------------------------------------------------------cccccccCCCCc
Confidence 000002334678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....++......+.+.+||.+||+.||.+|
T Consensus 185 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 264 (291)
T 1xbb_A 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENR 264 (291)
T ss_dssp GGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTS
T ss_pred eeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence 9999999998889999999999999999999 9988843 222334444444444344556789999999999999999
Q ss_pred CChhHHhh
Q 002843 574 PTTREILQ 581 (874)
Q Consensus 574 PTa~EiL~ 581 (874)
|++.++++
T Consensus 265 ps~~~l~~ 272 (291)
T 1xbb_A 265 PGFAAVEL 272 (291)
T ss_dssp CCHHHHHH
T ss_pred cCHHHHHH
Confidence 99999875
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=287.21 Aligned_cols=195 Identities=17% Similarity=0.188 Sum_probs=154.0
Q ss_pred CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeec-cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002843 270 ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSS-DHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ 348 (874)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy-~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~ 348 (874)
.|++++.+++....+.. .+++||| +.|++|.+++...+ .+++.+++.++.||+.||+|||++
T Consensus 96 ~h~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~ 158 (312)
T 2iwi_A 96 GHPGVIRLLDWFETQEG----------------FMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHSR 158 (312)
T ss_dssp CCSSBCCEEEEC---------------------CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeeEEEEEecCCe----------------EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 79999988876543322 3569999 89999999998765 699999999999999999999999
Q ss_pred CCcccCCCCCceEEe-cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccccc
Q 002843 349 GVTFLDLKPSSFKLL-QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427 (874)
Q Consensus 349 gIIHRDLKPsNILL~-~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~ 427 (874)
||+||||||+|||++ .++.+||+|||+++.....
T Consensus 159 ~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~--------------------------------------------- 193 (312)
T 2iwi_A 159 GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE--------------------------------------------- 193 (312)
T ss_dssp TEECCCCSGGGEEEETTTTEEEECCCSSCEECCSS---------------------------------------------
T ss_pred CeeecCCChhhEEEeCCCCeEEEEEcchhhhcccC---------------------------------------------
Confidence 999999999999999 7899999999987633200
Q ss_pred ccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC
Q 002843 428 SLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG 507 (874)
Q Consensus 428 ~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~ 507 (874)
......||+.|+|||++.+.
T Consensus 194 ------------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 213 (312)
T 2iwi_A 194 ------------------------------------------------------------PYTDFDGTRVYSPPEWISRH 213 (312)
T ss_dssp ------------------------------------------------------------CBCCCCSCTTTSCHHHHHHS
T ss_pred ------------------------------------------------------------cccccCCcccccCceeeecC
Confidence 00234688999999999876
Q ss_pred CC-CCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHH
Q 002843 508 VC-TTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (874)
Q Consensus 508 ~y-s~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~ 586 (874)
.+ +.++|||||||++|||++|..||......... ...++ ....+.+.+||.+||+.||++|||+.|+|+||||+
T Consensus 214 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~ 288 (312)
T 2iwi_A 214 QYHALPATVWSLGILLYDMVCGDIPFERDQEILEA--ELHFP---AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQ 288 (312)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHT--CCCCC---TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTC
T ss_pred CCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhh--ccCCc---ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhc
Confidence 66 45999999999999999999998654432221 11111 23457799999999999999999999999999999
Q ss_pred hhHhh
Q 002843 587 EFQEV 591 (874)
Q Consensus 587 ~~~~~ 591 (874)
...+.
T Consensus 289 ~~~~~ 293 (312)
T 2iwi_A 289 TPAED 293 (312)
T ss_dssp C----
T ss_pred Cchhc
Confidence 76543
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-31 Score=304.85 Aligned_cols=209 Identities=15% Similarity=0.097 Sum_probs=165.3
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLY 333 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~ 333 (874)
.......+..++....||+++.++.....+.. .+++||||+||+|.++|.... ..+++..++.
T Consensus 259 ~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~----------------~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~ 322 (495)
T 1opk_A 259 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP----------------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 322 (495)
T ss_dssp CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS----------------CEEEEECCTTCBHHHHHHHSCTTTSCHHHHHH
T ss_pred chHHHHHHHHHHHhcCCCCEeeEEEEEecCCc----------------EEEEEEccCCCCHHHHHHhcCcCCCCHHHHHH
Confidence 34556677788888899999998877543322 257999999999999998743 3699999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 323 i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~----------------------------- 373 (495)
T 1opk_A 323 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY----------------------------- 373 (495)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE-----------------------------
T ss_pred HHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCce-----------------------------
Confidence 999999999999999999999999999999999999999999874320000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
.......
T Consensus 374 -------------------------------------------------------------------------~~~~~~~ 380 (495)
T 1opk_A 374 -------------------------------------------------------------------------TAHAGAK 380 (495)
T ss_dssp -------------------------------------------------------------------------ECCTTCC
T ss_pred -------------------------------------------------------------------------eecCCCc
Confidence 0001234
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCC
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP 570 (874)
++..|+|||++.+..++.++|||||||+||||++ |..||... ......+......+......+.+.+||.+||+.||
T Consensus 381 ~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 460 (495)
T 1opk_A 381 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 460 (495)
T ss_dssp CCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred CCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcCh
Confidence 5678999999998899999999999999999999 88887431 12233444444444444556789999999999999
Q ss_pred CCCCChhHHhh
Q 002843 571 LSRPTTREILQ 581 (874)
Q Consensus 571 ~~RPTa~EiL~ 581 (874)
.+|||+.+|++
T Consensus 461 ~~RPs~~el~~ 471 (495)
T 1opk_A 461 SDRPSFAEIHQ 471 (495)
T ss_dssp GGSCCHHHHHH
T ss_pred hHCcCHHHHHH
Confidence 99999999965
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=310.43 Aligned_cols=209 Identities=13% Similarity=0.034 Sum_probs=164.7
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
......+..++....||+++.++..... .. .+++||||+||+|.++|.... .+++.+++.|+
T Consensus 414 ~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~----------------~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~i~ 475 (635)
T 4fl3_A 414 KDELLAEANVMQQLDNPYIVRMIGICEA-ES----------------WMLVMEMAELGPLNKYLQQNR-HVKDKNIIELV 475 (635)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEEES-SS----------------EEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCEeeEEEEEec-CC----------------EEEEEEccCCCCHHHHHhhCC-CCCHHHHHHHH
Confidence 3456677788888899999999875431 11 257999999999999998765 79999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
.||+.||+|||++|||||||||+||||+.++.+||+|||+++.+.....
T Consensus 476 ~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~------------------------------- 524 (635)
T 4fl3_A 476 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN------------------------------- 524 (635)
T ss_dssp HHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------------------------------
T ss_pred HHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc-------------------------------
Confidence 9999999999999999999999999999999999999999985431000
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
. ....+...+|
T Consensus 525 -------------------------~--------------------------------------------~~~~~~~~~t 535 (635)
T 4fl3_A 525 -------------------------Y--------------------------------------------YKAQTHGKWP 535 (635)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------c--------------------------------------------cccccCCCCc
Confidence 0 0000234567
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
+.|+|||++.+..|+.++|||||||+||||++ |..||.. .......+.....++......+.+.+||.+||+.||++
T Consensus 536 ~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~ 615 (635)
T 4fl3_A 536 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 615 (635)
T ss_dssp GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTT
T ss_pred eeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhH
Confidence 89999999999899999999999999999998 9999843 22334445555444444456678999999999999999
Q ss_pred CCChhHHhhh
Q 002843 573 RPTTREILQS 582 (874)
Q Consensus 573 RPTa~EiL~h 582 (874)
||++.+|++.
T Consensus 616 RPs~~~l~~~ 625 (635)
T 4fl3_A 616 RPGFAAVELR 625 (635)
T ss_dssp SCCHHHHHHH
T ss_pred CcCHHHHHHH
Confidence 9999998753
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=279.61 Aligned_cols=223 Identities=13% Similarity=0.079 Sum_probs=165.2
Q ss_pred hhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHH
Q 002843 254 SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIE 330 (874)
Q Consensus 254 ~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e 330 (874)
........+..++....||+++.++.......... ...+++||||+|++|.+++.. .+..+++.+
T Consensus 68 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 135 (317)
T 2buj_A 68 QDREEAQREADMHRLFNHPNILRLVAYCLRERGAK------------HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQ 135 (317)
T ss_dssp HHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTE------------EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCC------------ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHH
Confidence 34445566677888889999998877654211100 012579999999999999976 344799999
Q ss_pred HHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccch
Q 002843 331 CLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIA 410 (874)
Q Consensus 331 ~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~ 410 (874)
++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... +...
T Consensus 136 ~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~---------------------~~~~- 193 (317)
T 2buj_A 136 ILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE---------------------GSRQ- 193 (317)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEE---------------------SHHH-
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccc---------------------cccc-
Confidence 999999999999999999999999999999999999999999998764331000 0000
Q ss_pred hhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccc
Q 002843 411 SAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVS 490 (874)
Q Consensus 411 ~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t 490 (874)
. .......
T Consensus 194 ---~---------------------------------------------------------------------~~~~~~~ 201 (317)
T 2buj_A 194 ---A---------------------------------------------------------------------LTLQDWA 201 (317)
T ss_dssp ---H---------------------------------------------------------------------HHHHHHH
T ss_pred ---c---------------------------------------------------------------------ccccccc
Confidence 0 0000012
Q ss_pred cccccccccCcccccCCC---CCCccchhHHHHHHHHhcCCCCchHHHHH----HHHHhhcCCCCCCCCCCCHHHHHHHH
Q 002843 491 EQLEEKWYASPEELSGGV---CTTSSNIYSLGVLFFELFGRFDSERALAA----AMSDLRDRILPPSFLSENPKEAGFCL 563 (874)
Q Consensus 491 ~~~GT~~Y~APEvl~g~~---ys~kSDIwSLGVIL~ELltG~~p~~~~~~----~~~~l~~~~lpp~~~~~~p~l~dLi~ 563 (874)
...||+.|+|||++.+.. ++.++|||||||++|||++|..||..... ....+......+......+.+.+||.
T Consensus 202 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 281 (317)
T 2buj_A 202 AQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLN 281 (317)
T ss_dssp HHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHH
T ss_pred cccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHH
Confidence 456789999999998654 78999999999999999999999865321 12222333333344455678999999
Q ss_pred HccccCCCCCCChhHHhhh
Q 002843 564 WQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 564 ~cL~~dP~~RPTa~EiL~h 582 (874)
+||..||.+||++.+++++
T Consensus 282 ~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 282 SMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHhhcChhhCCCHHHHHHH
Confidence 9999999999999999886
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=283.06 Aligned_cols=201 Identities=14% Similarity=0.115 Sum_probs=150.6
Q ss_pred cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002843 269 NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ 348 (874)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~ 348 (874)
..||+++.++.......... ...+++||||+||+|.++++.. .+++.+++.|+.||+.||.|||++
T Consensus 88 ~~h~~i~~~~~~~~~~~~~~------------~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~ 153 (337)
T 3mdy_A 88 MRHENILGFIAADIKGTGSW------------TQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTE 153 (337)
T ss_dssp CCCTTBCCEEEEEEESCGGG------------CEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSC
T ss_pred hcCCCeeeEEEEEccCCCCC------------CceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 48999998887755332110 1126799999999999999876 599999999999999999999999
Q ss_pred --------CCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 349 --------GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 349 --------gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||+||||||+|||++.++.+||+|||+++.......
T Consensus 154 ~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~------------------------------------ 197 (337)
T 3mdy_A 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN------------------------------------ 197 (337)
T ss_dssp BCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC----------------------------------------
T ss_pred hhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccc------------------------------------
Confidence 999999999999999999999999999864331000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
..........||+.|+|
T Consensus 198 ---------------------------------------------------------------~~~~~~~~~~gt~~y~a 214 (337)
T 3mdy_A 198 ---------------------------------------------------------------EVDIPPNTRVGTKRYMP 214 (337)
T ss_dssp --------------------------------------------------------------------CCSSCSCGGGCC
T ss_pred ---------------------------------------------------------------cccCCCCCCccCcceeC
Confidence 00000124578999999
Q ss_pred cccccCCCCCCc------cchhHHHHHHHHhcCC----------CCchHH-------HHHHHHHhhcCCCCCCCCC----
Q 002843 501 PEELSGGVCTTS------SNIYSLGVLFFELFGR----------FDSERA-------LAAAMSDLRDRILPPSFLS---- 553 (874)
Q Consensus 501 PEvl~g~~ys~k------SDIwSLGVIL~ELltG----------~~p~~~-------~~~~~~~l~~~~lpp~~~~---- 553 (874)
||++.+..++.. +|||||||++|||++| ..|+.. .......+......+.+..
T Consensus 215 PE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (337)
T 3mdy_A 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSS 294 (337)
T ss_dssp HHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGG
T ss_pred hhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchh
Confidence 999988766655 9999999999999999 555532 1112222223333333322
Q ss_pred --CCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 554 --ENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 554 --~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
..+.+.+|+.+||+.||.+|||+.|++++
T Consensus 295 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 295 DECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp SHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 12458899999999999999999999876
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=277.94 Aligned_cols=209 Identities=11% Similarity=0.000 Sum_probs=161.5
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+...+....||+++.++.....+. .+++|||+++++|.+++......+++.+++.++.
T Consensus 66 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----------------~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 128 (291)
T 1u46_A 66 DDFIREVNAMHSLDHRNLIRLYGVVLTPP-----------------MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV 128 (291)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEECSSS-----------------CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcccEEEEEccCC-----------------ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHH
Confidence 34455666777788999998887654221 2579999999999999987544799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 129 ~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~-------------------------------- 176 (291)
T 1u46_A 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD-------------------------------- 176 (291)
T ss_dssp HHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC--------------------------------
T ss_pred HHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccccccccccc--------------------------------
Confidence 999999999999999999999999999999999999999874330000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.........+|+
T Consensus 177 --------------------------------------------------------------------~~~~~~~~~~~~ 188 (291)
T 1u46_A 177 --------------------------------------------------------------------HYVMQEHRKVPF 188 (291)
T ss_dssp --------------------------------------------------------------------EEEC-----CCG
T ss_pred --------------------------------------------------------------------chhhhccCCCCc
Confidence 000002345678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
.|+|||++.+..++.++|||||||++|||++ |..||.. ....+..+.. ...++......+.+.+|+.+||+.||.+
T Consensus 189 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 268 (291)
T 1u46_A 189 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPED 268 (291)
T ss_dssp GGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred eeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCccc
Confidence 8999999998889999999999999999999 9988843 2222333333 3333444455678999999999999999
Q ss_pred CCChhHHhhh
Q 002843 573 RPTTREILQS 582 (874)
Q Consensus 573 RPTa~EiL~h 582 (874)
|||+.+++++
T Consensus 269 Rps~~~l~~~ 278 (291)
T 1u46_A 269 RPTFVALRDF 278 (291)
T ss_dssp SCCHHHHHHH
T ss_pred CcCHHHHHHH
Confidence 9999999863
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-30 Score=280.57 Aligned_cols=213 Identities=13% Similarity=0.025 Sum_probs=159.1
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh-----CCCCCCHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA-----RGHKGKRIECL 332 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~-----~~~~lse~e~~ 332 (874)
....+...+....||+++.++........... ...+++||||+|++|.+++.. ....+++.+++
T Consensus 82 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~-----------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 150 (313)
T 3brb_A 82 EFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI-----------PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150 (313)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCEEEEC------------------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHH
T ss_pred HHHHHHHHHhcCCCCCeeeeeEEEeeccccCC-----------cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHH
Confidence 34556677888889999998877553332110 012679999999999999953 22379999999
Q ss_pred HHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 333 YIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 333 ~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 151 ~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~---------------------------- 202 (313)
T 3brb_A 151 KFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY---------------------------- 202 (313)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC------------------------------------
T ss_pred HHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccc----------------------------
Confidence 9999999999999999999999999999999999999999999874330000
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
.......
T Consensus 203 -------------------------------------------------------------------------~~~~~~~ 209 (313)
T 3brb_A 203 -------------------------------------------------------------------------YRQGRIA 209 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------------------------------------cCccccc
Confidence 0000234
Q ss_pred cccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccC
Q 002843 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 493 ~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~d 569 (874)
.+++.|+|||++.+..++.++|||||||++|||++ |..||... ......+.....++......+.+.+|+.+||..|
T Consensus 210 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 289 (313)
T 3brb_A 210 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTD 289 (313)
T ss_dssp -CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSS
T ss_pred CCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCC
Confidence 56789999999999899999999999999999999 88887431 1223334444444444455678999999999999
Q ss_pred CCCCCChhHHhhh
Q 002843 570 PLSRPTTREILQS 582 (874)
Q Consensus 570 P~~RPTa~EiL~h 582 (874)
|.+|||+.+++++
T Consensus 290 p~~Rps~~~l~~~ 302 (313)
T 3brb_A 290 PLDRPTFSVLRLQ 302 (313)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999876
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=276.54 Aligned_cols=207 Identities=14% Similarity=0.051 Sum_probs=161.9
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYI 334 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I 334 (874)
......+..++....||+++.+..... +. ..+++||||+|++|.+++.... ..+++.+++.+
T Consensus 52 ~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~----------------~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i 114 (279)
T 1qpc_A 52 PDAFLAEANLMKQLQHQRLVRLYAVVT-QE----------------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114 (279)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEEC-SS----------------SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcCcceEEEEEc-CC----------------CcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHH
Confidence 344556667788889999998876532 11 1257999999999999996532 26999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 115 ~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------ 164 (279)
T 1qpc_A 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY------------------------------ 164 (279)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE------------------------------
T ss_pred HHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc------------------------------
Confidence 99999999999999999999999999999999999999999864320000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
.......+
T Consensus 165 ------------------------------------------------------------------------~~~~~~~~ 172 (279)
T 1qpc_A 165 ------------------------------------------------------------------------TAREGAKF 172 (279)
T ss_dssp ------------------------------------------------------------------------ECCTTCCC
T ss_pred ------------------------------------------------------------------------ccccCCCC
Confidence 00023346
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
++.|+|||++.+..++.++|||||||++|||++ |..||.. .......+.....+.......+.+.+|+.+||+.||+
T Consensus 173 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 252 (279)
T 1qpc_A 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPE 252 (279)
T ss_dssp CTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred ccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHHHHhccChh
Confidence 778999999998889999999999999999999 8888743 2233444444443333445567899999999999999
Q ss_pred CCCChhHHhh
Q 002843 572 SRPTTREILQ 581 (874)
Q Consensus 572 ~RPTa~EiL~ 581 (874)
+|||+.++++
T Consensus 253 ~Rps~~~l~~ 262 (279)
T 1qpc_A 253 DRPTFDYLRS 262 (279)
T ss_dssp GSCCHHHHHH
T ss_pred hCCCHHHHHH
Confidence 9999999876
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-31 Score=296.85 Aligned_cols=208 Identities=11% Similarity=-0.000 Sum_probs=156.7
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--CCCCHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--HKGKRIECLYI 334 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~--~~lse~e~~~I 334 (874)
.....+..++....||+++.++.......... .+++||||+|++|.+++.... ..+++.+++.|
T Consensus 52 ~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~--------------~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i 117 (396)
T 4eut_A 52 DVQMREFEVLKKLNHKNIVKLFAIEEETTTRH--------------KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIV 117 (396)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEEECTTTCC--------------EEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCeEEEeeccCCCCe--------------eEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHH
Confidence 33445667788888999999987655333211 267999999999999997643 24999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEE----ecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccch
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKL----LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIA 410 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL----~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~ 410 (874)
+.||+.||+|||++||+||||||+|||+ +..+.+||+|||+++.....
T Consensus 118 ~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~---------------------------- 169 (396)
T 4eut_A 118 LRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD---------------------------- 169 (396)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG----------------------------
T ss_pred HHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC----------------------------
Confidence 9999999999999999999999999999 66677999999998743300
Q ss_pred hhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccc
Q 002843 411 SAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVS 490 (874)
Q Consensus 411 ~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t 490 (874)
....
T Consensus 170 ----------------------------------------------------------------------------~~~~ 173 (396)
T 4eut_A 170 ----------------------------------------------------------------------------EQFV 173 (396)
T ss_dssp ----------------------------------------------------------------------------GGSS
T ss_pred ----------------------------------------------------------------------------Cccc
Confidence 0002
Q ss_pred cccccccccCcccccC--------CCCCCccchhHHHHHHHHhcCCCCchHH------HHHHHHHhhcCCCCC-------
Q 002843 491 EQLEEKWYASPEELSG--------GVCTTSSNIYSLGVLFFELFGRFDSERA------LAAAMSDLRDRILPP------- 549 (874)
Q Consensus 491 ~~~GT~~Y~APEvl~g--------~~ys~kSDIwSLGVIL~ELltG~~p~~~------~~~~~~~l~~~~lpp------- 549 (874)
...||+.|+|||++.+ ..++.++|||||||++|||++|..||.. ....+..+..+..+.
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 253 (396)
T 4eut_A 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK 253 (396)
T ss_dssp CSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEEC
T ss_pred cccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhhee
Confidence 4568999999999875 4678999999999999999999998732 222333333322111
Q ss_pred -------------CCCCC----CHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 550 -------------SFLSE----NPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 550 -------------~~~~~----~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
..... .+.+.+|+.+||..||++||++.|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 254 AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp STTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred ccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 00111 1357799999999999999999998664
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=288.57 Aligned_cols=212 Identities=13% Similarity=0.009 Sum_probs=158.5
Q ss_pred HHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
.+...+....||+++.++.......... ...+++|||| |++|.+++...+ .+++.+++.|+.||+.
T Consensus 97 ~e~~~~~~l~h~ni~~~~~~~~~~~~~~------------~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~ 162 (345)
T 2v62_A 97 KKWIERKQLDYLGIPLFYGSGLTEFKGR------------SYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLD 162 (345)
T ss_dssp HHHHHHHTCSCCCCCCEEEEEEEESSSC------------EEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHH
T ss_pred HHHHhhccccccCcceeecccccccCCC------------cEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHH
Confidence 3445667778999999888765421100 0126799999 999999998766 7999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCC--cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSN--QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~--~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
||+|||++||+||||||+|||++.++ .+||+|||+++.+......
T Consensus 163 aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~--------------------------------- 209 (345)
T 2v62_A 163 VLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNH--------------------------------- 209 (345)
T ss_dssp HHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCC---------------------------------
T ss_pred HHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceeccccccc---------------------------------
Confidence 99999999999999999999999887 9999999998754311000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
.. ..........||+.|
T Consensus 210 --------------------~~-------------------------------------------~~~~~~~~~~gt~~y 226 (345)
T 2v62_A 210 --------------------KQ-------------------------------------------YQENPRKGHNGTIEF 226 (345)
T ss_dssp --------------------CC-------------------------------------------CCCCGGGCSCSCTTT
T ss_pred --------------------cc-------------------------------------------chhccccccCCCccc
Confidence 00 000001355789999
Q ss_pred cCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhhc---CCCCCC------CCCCCHHHHHHHHHcc
Q 002843 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLRD---RILPPS------FLSENPKEAGFCLWQL 566 (874)
Q Consensus 499 ~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~~---~~lpp~------~~~~~p~l~dLi~~cL 566 (874)
+|||++.+..++.++|||||||+||||++|..||... ......... ..+++. .....+.+.+||.+||
T Consensus 227 ~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 306 (345)
T 2v62_A 227 TSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAH 306 (345)
T ss_dssp CCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHH
T ss_pred cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHh
Confidence 9999999988999999999999999999999998431 111111111 112211 1145578999999999
Q ss_pred ccCCCCCCChhHHhhh
Q 002843 567 HPEPLSRPTTREILQS 582 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~h 582 (874)
..||.+||++.+|++.
T Consensus 307 ~~dp~~Rps~~~l~~~ 322 (345)
T 2v62_A 307 SLAYDEKPNYQALKKI 322 (345)
T ss_dssp TCCTTCCCCHHHHHHH
T ss_pred hcCcccCCCHHHHHHH
Confidence 9999999999999764
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-30 Score=275.33 Aligned_cols=212 Identities=15% Similarity=0.157 Sum_probs=158.7
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLY 333 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~ 333 (874)
.....+...+....||+++.++.....+... +++|||++|++|.+++.. ....+++.+++.
T Consensus 77 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 140 (310)
T 2wqm_A 77 ADCIKEIDLLKQLNHPNVIKYYASFIEDNEL----------------NIVLELADAGDLSRMIKHFKKQKRLIPERTVWK 140 (310)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEEEETTEE----------------EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEEcCCcE----------------EEEEecCCCCCHHHHHHHhcccccCCCHHHHHH
Confidence 4455666778888999999988776543332 469999999999999964 334799999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 141 i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~------------------------------ 190 (310)
T 2wqm_A 141 YFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT------------------------------ 190 (310)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC----------------------------------------
T ss_pred HHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC------------------------------
Confidence 99999999999999999999999999999999999999999876432000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
.......
T Consensus 191 -------------------------------------------------------------------------~~~~~~~ 197 (310)
T 2wqm_A 191 -------------------------------------------------------------------------TAAHSLV 197 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------------------------------------ccccccC
Confidence 0002346
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH----HHHHHhhcCCCCCCC-CCCCHHHHHHHHHcccc
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA----AAMSDLRDRILPPSF-LSENPKEAGFCLWQLHP 568 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~----~~~~~l~~~~lpp~~-~~~~p~l~dLi~~cL~~ 568 (874)
||+.|+|||++.+..++.++|||||||++|||++|..||.... .....+.....++.. ....+.+.+||.+||+.
T Consensus 198 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 277 (310)
T 2wqm_A 198 GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINP 277 (310)
T ss_dssp -CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCS
T ss_pred CCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCC
Confidence 7899999999999899999999999999999999999884321 223334444444332 33457799999999999
Q ss_pred CCCCCCChhHHhhhHHHHhhH
Q 002843 569 EPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~~~ 589 (874)
||.+||++.+++++ ++.+.
T Consensus 278 dp~~Rps~~~il~~--l~~l~ 296 (310)
T 2wqm_A 278 DPEKRPDVTYVYDV--AKRMH 296 (310)
T ss_dssp SGGGSCCHHHHHHH--HHHHH
T ss_pred ChhhCCCHHHHHHH--HHHHH
Confidence 99999999999864 44443
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=287.50 Aligned_cols=224 Identities=13% Similarity=0.009 Sum_probs=160.0
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCcccc---CCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW---IGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYI 334 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I 334 (874)
...+..++....||+++.++........ .....+...+. ...+++|||| |++|.++|... ...+++.+++.|
T Consensus 89 ~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i 164 (352)
T 2jii_A 89 LFNEQNFFQRAAKPLQVNKWKKLYSTPL---LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQV 164 (352)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHTTCTT---CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHH
T ss_pred HHHHHHHHHHhcccchhhhhhhhccCCc---cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHH
Confidence 4445566677778888876554221111 11112222221 1257899999 99999999875 237999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCC--cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN--QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~--~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
+.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.+......
T Consensus 165 ~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------- 217 (352)
T 2jii_A 165 ACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKH--------------------------- 217 (352)
T ss_dssp HHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCC---------------------------
T ss_pred HHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCcc---------------------------
Confidence 99999999999999999999999999999988 8999999998754311000
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
.. .........
T Consensus 218 ----------------------------~~-----------------------------------------~~~~~~~~~ 228 (352)
T 2jii_A 218 ----------------------------VA-----------------------------------------YVEGSRSPH 228 (352)
T ss_dssp ----------------------------CC-----------------------------------------CCTTSSCTT
T ss_pred ----------------------------cc-----------------------------------------ccccccccc
Confidence 00 000001345
Q ss_pred cccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH----HHHHH---hhcCCC--CCC---CCCCCHHHHH
Q 002843 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA----AAMSD---LRDRIL--PPS---FLSENPKEAG 560 (874)
Q Consensus 493 ~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~----~~~~~---l~~~~l--pp~---~~~~~p~l~d 560 (874)
.||+.|+|||++.+..++.++|||||||+||||++|..||.... ..... +..... +.. +....+.+.+
T Consensus 229 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (352)
T 2jii_A 229 EGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQK 308 (352)
T ss_dssp CSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHH
T ss_pred cCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHH
Confidence 78999999999999899999999999999999999999985421 11111 111111 111 1234678999
Q ss_pred HHHHccccCCCCCCChhHHhhh
Q 002843 561 FCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 561 Li~~cL~~dP~~RPTa~EiL~h 582 (874)
|+.+||..||.+||++.++++.
T Consensus 309 li~~~l~~dp~~Rps~~~l~~~ 330 (352)
T 2jii_A 309 YLKVVMALTYEEKPPYAMLRNN 330 (352)
T ss_dssp HHHHHHTCCTTCCCCHHHHHHH
T ss_pred HHHHHHhCChhhCCCHHHHHHH
Confidence 9999999999999999999764
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=296.48 Aligned_cols=248 Identities=15% Similarity=0.061 Sum_probs=179.1
Q ss_pred ccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCC
Q 002843 196 LSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKP 274 (874)
Q Consensus 196 ~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~ 274 (874)
++++.++. +.|.+++| |.||+|...+. ...+++.++... ........+..++....||++
T Consensus 181 i~~~~~~~~~~lG~G~f------------g~Vy~~~~~~~------~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~i 241 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCF------------GEVWMGTWNGT------TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKL 241 (452)
T ss_dssp CCGGGEEEEEEEEECSS------------CEEEEEEETTT------EEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTB
T ss_pred cChhHceeeeeecCCCC------------eEEEEEEECCC------ceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCE
Confidence 34455544 56666544 66777763211 112223333221 233455667778888899999
Q ss_pred ceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002843 275 VGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFL 353 (874)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL~yLHs~gIIHR 353 (874)
+.++.... +. ..+++||||+||+|.++|... +..+++.+++.|+.||+.||+|||++||+||
T Consensus 242 v~~~~~~~-~~----------------~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHr 304 (452)
T 1fmk_A 242 VQLYAVVS-EE----------------PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304 (452)
T ss_dssp CCEEEEEC-SS----------------SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred eeEEEEEc-CC----------------ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 99876533 11 125799999999999999752 3369999999999999999999999999999
Q ss_pred CCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCc
Q 002843 354 DLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSK 433 (874)
Q Consensus 354 DLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~ 433 (874)
||||+|||++.++.+||+|||+++.......
T Consensus 305 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~------------------------------------------------- 335 (452)
T 1fmk_A 305 DLRAANILVGENLVCKVADFGLARLIEDNEY------------------------------------------------- 335 (452)
T ss_dssp CCSGGGEEECGGGCEEECCCCTTC--------------------------------------------------------
T ss_pred CCChhhEEECCCCCEEECCCccceecCCCce-------------------------------------------------
Confidence 9999999999999999999999874330000
Q ss_pred cCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCcc
Q 002843 434 YGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSS 513 (874)
Q Consensus 434 ~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kS 513 (874)
.......++..|+|||++.+..++.++
T Consensus 336 -----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~s 362 (452)
T 1fmk_A 336 -----------------------------------------------------TARQGAKFPIKWTAPEAALYGRFTIKS 362 (452)
T ss_dssp ------------------------------------------------------------CCGGGSCHHHHHHCCCCHHH
T ss_pred -----------------------------------------------------ecccCCcccccccCHhHHhcCCCCccc
Confidence 000123457789999999988999999
Q ss_pred chhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 514 NIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 514 DIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
|||||||+||||++ |..||.. ....+..+.....++......+.+.+||.+||+.||++|||+.++++
T Consensus 363 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~ 433 (452)
T 1fmk_A 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 433 (452)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99999999999999 8888743 22334445544444444455677999999999999999999999875
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-30 Score=278.42 Aligned_cols=208 Identities=15% Similarity=0.092 Sum_probs=156.7
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC--CCCCCHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR--GHKGKRIECLYI 334 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~--~~~lse~e~~~I 334 (874)
.....+..++....||+++.+......+.. .+++||||+|++|.+++... ...+++..++.|
T Consensus 75 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i 138 (307)
T 2nru_A 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDD----------------LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 138 (307)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEECSSSS----------------CEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCeEEEEEEEecCCc----------------eEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHH
Confidence 345556677888899999988876543222 35799999999999999742 336999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 139 ~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~------------------------------ 188 (307)
T 2nru_A 139 AQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ------------------------------ 188 (307)
T ss_dssp HHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS------------------------------
T ss_pred HHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccc------------------------------
Confidence 99999999999999999999999999999999999999998863320000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
........|
T Consensus 189 -----------------------------------------------------------------------~~~~~~~~g 197 (307)
T 2nru_A 189 -----------------------------------------------------------------------TVMTSRIVG 197 (307)
T ss_dssp -----------------------------------------------------------------------CEECSSCCS
T ss_pred -----------------------------------------------------------------------cccccccCC
Confidence 000024568
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH------HHHHHhhcC------CCCCCCCCC----CHHH
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA------AAMSDLRDR------ILPPSFLSE----NPKE 558 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~------~~~~~l~~~------~lpp~~~~~----~p~l 558 (874)
|+.|+|||++.+ .++.++|||||||++|+|++|..||.... .....+... .+.+.+... ...+
T Consensus 198 ~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 276 (307)
T 2nru_A 198 TTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAM 276 (307)
T ss_dssp CGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHH
T ss_pred CcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHH
Confidence 999999999875 58999999999999999999998874311 111111110 111112111 2457
Q ss_pred HHHHHHccccCCCCCCChhHHhhh
Q 002843 559 AGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 559 ~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.+|+.+||+.||.+|||+.+++++
T Consensus 277 ~~li~~cl~~~p~~Rps~~~l~~~ 300 (307)
T 2nru_A 277 YSVASQCLHEKKNKRPDIKKVQQL 300 (307)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHHcCCCcccCcCHHHHHHH
Confidence 899999999999999999999865
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-30 Score=280.86 Aligned_cols=226 Identities=16% Similarity=0.075 Sum_probs=143.4
Q ss_pred HHHHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh--CCCCCCHHHHHH
Q 002843 257 ALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA--RGHKGKRIECLY 333 (874)
Q Consensus 257 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~--~~~~lse~e~~~ 333 (874)
.....+...+... .||+++.++........... ......+++||||. |+|.+++.. ....+++.+++.
T Consensus 70 ~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~--------~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~ 140 (337)
T 3ll6_A 70 RAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD--------TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLK 140 (337)
T ss_dssp HHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST--------TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHH
T ss_pred HHHHHHHHHHHHhccCCChhhccccccccccccc--------cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHH
Confidence 3344455555555 49999998877542221110 00011368999997 799999965 333799999999
Q ss_pred HHHHHHHHHHHHHHCC--CcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchh
Q 002843 334 IFRQIVALVDYHHTQG--VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (874)
Q Consensus 334 I~~QIl~aL~yLHs~g--IIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~ 411 (874)
|+.||+.||+|||++| |+||||||+|||++.++.+||+|||+++....... ... .
T Consensus 141 i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--------------------~~~---~ 197 (337)
T 3ll6_A 141 IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPD--------------------YSW---S 197 (337)
T ss_dssp HHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC----------------------------
T ss_pred HHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCc--------------------ccc---c
Confidence 9999999999999999 99999999999999999999999999875431100 000 0
Q ss_pred hhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccc
Q 002843 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (874)
Q Consensus 412 ~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~ 491 (874)
. ...........
T Consensus 198 -----------------------------~---------------------------------------~~~~~~~~~~~ 209 (337)
T 3ll6_A 198 -----------------------------A---------------------------------------QRRALVEEEIT 209 (337)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------c---------------------------------------cccccchhhcc
Confidence 0 00000000134
Q ss_pred ccccccccCcccc---cCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHcccc
Q 002843 492 QLEEKWYASPEEL---SGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 492 ~~GT~~Y~APEvl---~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~ 568 (874)
..||+.|+|||++ .+..++.++|||||||++|||++|..||..... ...+......+......+.+.+||.+||++
T Consensus 210 ~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 288 (337)
T 3ll6_A 210 RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK-LRIVNGKYSIPPHDTQYTVFHSLIRAMLQV 288 (337)
T ss_dssp --------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------CCCCTTCCSSGGGHHHHHHHSCS
T ss_pred ccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH-HHhhcCcccCCcccccchHHHHHHHHHccC
Confidence 5789999999998 456789999999999999999999999865432 112222222233334456788999999999
Q ss_pred CCCCCCChhHHhhhH
Q 002843 569 EPLSRPTTREILQSE 583 (874)
Q Consensus 569 dP~~RPTa~EiL~hp 583 (874)
||.+|||+.|++++-
T Consensus 289 ~p~~Rps~~e~l~~l 303 (337)
T 3ll6_A 289 NPEERLSIAEVVHQL 303 (337)
T ss_dssp SGGGSCCHHHHHHHH
T ss_pred ChhhCcCHHHHHHHH
Confidence 999999999999873
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-30 Score=301.27 Aligned_cols=234 Identities=14% Similarity=0.032 Sum_probs=174.4
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
+.|.||+|...+. ...+++.++... ........+..++....|++++.++.... +..
T Consensus 279 ~fg~Vy~~~~~~~------~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~--------------- 335 (535)
T 2h8h_A 279 CFGEVWMGTWNGT------TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEP--------------- 335 (535)
T ss_dssp SSEEEEEEEETTT------EEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS---------------
T ss_pred CCeEEEEEEECCC------ceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEe-ecc---------------
Confidence 3467787763211 112233333322 23345566777888889999999876532 111
Q ss_pred CCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 302 GGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
.+++||||+||+|.++|... +..+++.+++.|+.||+.||+|||++|||||||||+||||+.++.+||+|||+++.+.
T Consensus 336 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 336 -IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp -CEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred -ceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 25799999999999999752 3369999999999999999999999999999999999999999999999999987433
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
....
T Consensus 415 ~~~~---------------------------------------------------------------------------- 418 (535)
T 2h8h_A 415 DNEY---------------------------------------------------------------------------- 418 (535)
T ss_dssp CHHH----------------------------------------------------------------------------
T ss_pred CCce----------------------------------------------------------------------------
Confidence 1000
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHH
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAA 537 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~ 537 (874)
.......++..|+|||++.+..++.++|||||||+||||++ |..||.. ...
T Consensus 419 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~ 472 (535)
T 2h8h_A 419 --------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 472 (535)
T ss_dssp --------------------------HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH
T ss_pred --------------------------ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 00012345678999999998899999999999999999999 8888743 223
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 538 AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 538 ~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
.+..+......+......+.+.+||.+||+.||++|||+.+|++
T Consensus 473 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 516 (535)
T 2h8h_A 473 VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 516 (535)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 34445544444434455677999999999999999999999875
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=274.84 Aligned_cols=210 Identities=18% Similarity=0.185 Sum_probs=153.8
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++.....++.. +++||||+|++|.+++...+ .+++.+++.|+.
T Consensus 79 ~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ 141 (309)
T 2h34_A 79 TRMQREARTAGRLQEPHVVPIHDFGEIDGQL----------------YVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVR 141 (309)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEEEEEETTEE----------------EEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCeeEEEEEEeeCCeE----------------EEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHH
Confidence 3445566778888999999888776543332 46999999999999998765 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 142 qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--------------------------------- 188 (309)
T 2h34_A 142 QIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK--------------------------------- 188 (309)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-----------------------------------------
T ss_pred HHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc---------------------------------
Confidence 99999999999999999999999999999999999999986433000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
........||+
T Consensus 189 ---------------------------------------------------------------------~~~~~~~~~~~ 199 (309)
T 2h34_A 189 ---------------------------------------------------------------------LTQLGNTVGTL 199 (309)
T ss_dssp -----------------------------------------------------------------------------CCG
T ss_pred ---------------------------------------------------------------------cccccccCCCc
Confidence 00012446889
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCCCC--CCCCCCHHHHHHHHHccccCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRILPP--SFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~lpp--~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
.|+|||++.+..++.++|||||||++|||++|..||.... .....+.....++ ......+.+.+||.+||+.||.+
T Consensus 200 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~ 279 (309)
T 2h34_A 200 YYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPED 279 (309)
T ss_dssp GGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGG
T ss_pred CccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHH
Confidence 9999999999889999999999999999999999984322 1222233322221 12334567899999999999999
Q ss_pred CC-ChhHHhhhHHHH
Q 002843 573 RP-TTREILQSEVTN 586 (874)
Q Consensus 573 RP-Ta~EiL~hp~~~ 586 (874)
|| ++.+++ +.+-+
T Consensus 280 Rp~s~~~l~-~~l~~ 293 (309)
T 2h34_A 280 RYVTCGDLS-AAAHA 293 (309)
T ss_dssp SCSSHHHHH-HHHHH
T ss_pred HHHhHHHHH-HHHHH
Confidence 99 666654 34433
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-30 Score=307.09 Aligned_cols=224 Identities=18% Similarity=0.101 Sum_probs=165.1
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC--CCCCHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--HKGKRIECLY 333 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~--~~lse~e~~~ 333 (874)
......+...+....||+++.+.......... ......+++||||+|++|.+++.... ..+++.+++.
T Consensus 56 ~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~----------~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~ 125 (676)
T 3qa8_A 56 RERWCLEIQIMKKLNHPNVVSAREVPDGLQKL----------APNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT 125 (676)
T ss_dssp HHHHHHHHHHHHHCCBTTBCCEEECCTTTCCC----------CTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCceeeeecccccc----------cCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHH
Confidence 34456677788888999999886653311100 00112467999999999999998743 2699999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCc---EEEeccccchhccccccCCCCcchhhhhhcccchhhhccccch
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ---VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIA 410 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~---vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~ 410 (874)
|+.||+.||+|||++||+||||||+|||++.++. +||+|||+++.....
T Consensus 126 I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~---------------------------- 177 (676)
T 3qa8_A 126 LLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG---------------------------- 177 (676)
T ss_dssp HHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSC----------------------------
T ss_pred HHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccc----------------------------
Confidence 9999999999999999999999999999997765 999999998633200
Q ss_pred hhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccc
Q 002843 411 SAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVS 490 (874)
Q Consensus 411 ~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t 490 (874)
....
T Consensus 178 ----------------------------------------------------------------------------~~~~ 181 (676)
T 3qa8_A 178 ----------------------------------------------------------------------------ELCT 181 (676)
T ss_dssp ----------------------------------------------------------------------------CCCC
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0002
Q ss_pred cccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHH-----------H-hhcCC----------C-
Q 002843 491 EQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMS-----------D-LRDRI----------L- 547 (874)
Q Consensus 491 ~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~-----------~-l~~~~----------l- 547 (874)
...||+.|+|||++.+..++.++|||||||++|||++|..||........ . ..... +
T Consensus 182 ~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp 261 (676)
T 3qa8_A 182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLP 261 (676)
T ss_dssp CCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSC
T ss_pred cccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccC
Confidence 45788999999999998999999999999999999999988843211110 0 00000 0
Q ss_pred -CCCCCC-CCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhhh
Q 002843 548 -PPSFLS-ENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA 593 (874)
Q Consensus 548 -pp~~~~-~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~~ 593 (874)
+..+.. ..+.+.+||.+||.+||++|||+.|+|+||||+.+.....
T Consensus 262 ~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 262 TPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp CSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred CchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 011111 1256889999999999999999999999999999887775
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-30 Score=280.10 Aligned_cols=201 Identities=13% Similarity=0.079 Sum_probs=152.9
Q ss_pred cCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH--
Q 002843 269 NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHH-- 346 (874)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLH-- 346 (874)
..||+++.++.....+.... ...+++||||+||+|.+++.+. .+++.+++.++.||+.||.|||
T Consensus 93 l~h~ni~~~~~~~~~~~~~~------------~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~ 158 (342)
T 1b6c_B 93 LRHENILGFIAADNKDNGTW------------TQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHME 158 (342)
T ss_dssp CCCTTBCCEEEEEECCCSSC------------CCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCcEEEEEeeecccCCcc------------ceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHH
Confidence 68999998887755433110 1136799999999999999875 5999999999999999999999
Q ss_pred ------HCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 347 ------TQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 347 ------s~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
++||+||||||+|||++.++.+||+|||+++.......
T Consensus 159 ~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~------------------------------------ 202 (342)
T 1b6c_B 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD------------------------------------ 202 (342)
T ss_dssp BCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTT------------------------------------
T ss_pred HhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceecccccc------------------------------------
Confidence 89999999999999999999999999999864330000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
.. ........||+.|+|
T Consensus 203 -------------------~~--------------------------------------------~~~~~~~~gt~~y~a 219 (342)
T 1b6c_B 203 -------------------TI--------------------------------------------DIAPNHRVGTKRYMA 219 (342)
T ss_dssp -------------------EE--------------------------------------------EECCCSCCCCGGGCC
T ss_pred -------------------cc--------------------------------------------ccccccCCcCcccCC
Confidence 00 000134578999999
Q ss_pred cccccCC------CCCCccchhHHHHHHHHhcCC----------CCchHH-------HHHHHHHhhcCCCCCCCCCC---
Q 002843 501 PEELSGG------VCTTSSNIYSLGVLFFELFGR----------FDSERA-------LAAAMSDLRDRILPPSFLSE--- 554 (874)
Q Consensus 501 PEvl~g~------~ys~kSDIwSLGVIL~ELltG----------~~p~~~-------~~~~~~~l~~~~lpp~~~~~--- 554 (874)
||++.+. .++.++|||||||++|||++| ..||.. .......+....+.+.+...
T Consensus 220 PE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (342)
T 1b6c_B 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQS 299 (342)
T ss_dssp HHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGT
T ss_pred HhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccc
Confidence 9999875 234789999999999999998 566633 22233334444444443321
Q ss_pred ---CHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 555 ---NPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 555 ---~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
...+.+|+.+||+.||++|||+.|++++
T Consensus 300 ~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 300 CEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp SHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 1358899999999999999999999876
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-29 Score=275.56 Aligned_cols=206 Identities=16% Similarity=0.087 Sum_probs=155.0
Q ss_pred HHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHH
Q 002843 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (874)
Q Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~a 341 (874)
+..++....||+++.++........ .+++||||+|++|.+++...+..+++.+++.|+.||+.|
T Consensus 79 e~~~l~~l~h~~iv~~~~~~~~~~~----------------~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~a 142 (319)
T 2y4i_B 79 EVMAYRQTRHENVVLFMGACMSPPH----------------LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKG 142 (319)
T ss_dssp TGGGGTTCCCTTBCCCCEEEECSSC----------------EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCEeEEEEEEecCCc----------------eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 4456677789999888877653332 256999999999999998766679999999999999999
Q ss_pred HHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccc
Q 002843 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (874)
Q Consensus 342 L~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~ 421 (874)
|+|||++||+||||||+|||++ ++.+||+|||+++.......
T Consensus 143 l~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~------------------------------------- 184 (319)
T 2y4i_B 143 MGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA------------------------------------- 184 (319)
T ss_dssp HHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC--------------------------------------------
T ss_pred HHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccc-------------------------------------
Confidence 9999999999999999999998 68999999999764320000
Q ss_pred ccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCc
Q 002843 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (874)
Q Consensus 422 ~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~AP 501 (874)
. ..........||+.|+||
T Consensus 185 ------------------~-------------------------------------------~~~~~~~~~~g~~~y~aP 203 (319)
T 2y4i_B 185 ------------------G-------------------------------------------RREDKLRIQNGWLCHLAP 203 (319)
T ss_dssp ----------------------------------------------------------------CCSCBCCSGGGGTSCH
T ss_pred ------------------c-------------------------------------------ccccccccCCCcccccCh
Confidence 0 000001345689999999
Q ss_pred ccccC---------CCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCC-CCCCHHHHHHHHHccccC
Q 002843 502 EELSG---------GVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPE 569 (874)
Q Consensus 502 Evl~g---------~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~-~~~~p~l~dLi~~cL~~d 569 (874)
|++.+ ..++.++|||||||++|||++|..||.. .......+.....+... ....+.+.+|+.+||..|
T Consensus 204 E~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 283 (319)
T 2y4i_B 204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFE 283 (319)
T ss_dssp HHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSS
T ss_pred HHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCC
Confidence 99975 3478999999999999999999988843 22223334433333222 234567899999999999
Q ss_pred CCCCCChhHHhhh
Q 002843 570 PLSRPTTREILQS 582 (874)
Q Consensus 570 P~~RPTa~EiL~h 582 (874)
|.+|||+.++++.
T Consensus 284 p~~Rpt~~~l~~~ 296 (319)
T 2y4i_B 284 QEERPTFTKLMDM 296 (319)
T ss_dssp TTTSCCHHHHHHH
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999763
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=303.79 Aligned_cols=207 Identities=13% Similarity=0.079 Sum_probs=163.2
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++.... ++. .+++||||+||+|.+++...+..+++..++.|+.
T Consensus 436 ~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~----------------~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~ 498 (656)
T 2j0j_A 436 EKFLQEALTMRQFDHPHIVKLIGVIT-ENP----------------VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498 (656)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEEC-SSS----------------CEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEe-cCc----------------eEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHH
Confidence 34556667888889999999886532 211 2579999999999999987766799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 499 qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~-------------------------------- 546 (656)
T 2j0j_A 499 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY-------------------------------- 546 (656)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-----------------------------------
T ss_pred HHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcc--------------------------------
Confidence 999999999999999999999999999999999999999874330000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......+|+
T Consensus 547 ----------------------------------------------------------------------~~~~~~~~t~ 556 (656)
T 2j0j_A 547 ----------------------------------------------------------------------YKASKGKLPI 556 (656)
T ss_dssp -----------------------------------------------------------------------------CCG
T ss_pred ----------------------------------------------------------------------eeccCCCCCc
Confidence 0002345678
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..++.++|||||||++|||++ |..||.. ....+..+.....++......+.+.+||.+||+.||.+|
T Consensus 557 ~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 636 (656)
T 2j0j_A 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 636 (656)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred ceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHC
Confidence 9999999998899999999999999999997 8888843 223344444444444444556889999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
||+.++++.
T Consensus 637 Ps~~el~~~ 645 (656)
T 2j0j_A 637 PRFTELKAQ 645 (656)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 999999754
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=294.74 Aligned_cols=181 Identities=14% Similarity=0.120 Sum_probs=141.0
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEE---ecCCcEEEeccccchhcc
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL---LQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL---~~~~~vKLiDFGlar~~~ 380 (874)
+++|||| |++|.+++......+++.+++.|+.||+.||+|||++|||||||||+|||| +.++.+||+|||+++...
T Consensus 79 ~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 79 VLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 6799999 899999998765589999999999999999999999999999999999999 588999999999987544
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
..... ..
T Consensus 158 ~~~~~-----------------------------------------------------~~-------------------- 164 (483)
T 3sv0_A 158 DTSTH-----------------------------------------------------QH-------------------- 164 (483)
T ss_dssp CTTTC-----------------------------------------------------CB--------------------
T ss_pred CCccc-----------------------------------------------------cc--------------------
Confidence 11000 00
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH-----H
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA-----L 535 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~-----~ 535 (874)
..........||+.|+|||++.+..++.++||||||||||||++|..||.. .
T Consensus 165 -----------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~ 221 (483)
T 3sv0_A 165 -----------------------IPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK 221 (483)
T ss_dssp -----------------------CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH
T ss_pred -----------------------cccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH
Confidence 000001356899999999999999999999999999999999999999843 1
Q ss_pred HHHHHHhhc----CCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 536 AAAMSDLRD----RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 536 ~~~~~~l~~----~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
...+..+.. ..+........+.+.+||.+||+.+|.+||++.+|++
T Consensus 222 ~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 222 KQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 111222221 1111111234567999999999999999999999875
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-30 Score=289.19 Aligned_cols=180 Identities=14% Similarity=0.062 Sum_probs=142.9
Q ss_pred CceEeeccCCCCHHHHHH------hCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccc
Q 002843 303 GLRQGSSDHGVNLREWLN------ARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~------~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGla 376 (874)
.+++|+++ +++|.++++ ..+..+++..++.|+.||+.||+|||++|||||||||+||||+.++.+||+|||++
T Consensus 180 ~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a 258 (413)
T 3dzo_A 180 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL 258 (413)
T ss_dssp EEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred eEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccce
Confidence 35677766 589999995 22336888999999999999999999999999999999999999999999999997
Q ss_pred hhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCC
Q 002843 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (874)
Q Consensus 377 r~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~ 456 (874)
+.....
T Consensus 259 ~~~~~~-------------------------------------------------------------------------- 264 (413)
T 3dzo_A 259 VRDGAS-------------------------------------------------------------------------- 264 (413)
T ss_dssp EETTEE--------------------------------------------------------------------------
T ss_pred eecCCc--------------------------------------------------------------------------
Confidence 632200
Q ss_pred CCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccc----------cCCCCCCccchhHHHHHHHHhc
Q 002843 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL----------SGGVCTTSSNIYSLGVLFFELF 526 (874)
Q Consensus 457 ~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl----------~g~~ys~kSDIwSLGVIL~ELl 526 (874)
....+| +.|+|||++ .+..|+.++|||||||+||||+
T Consensus 265 --------------------------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell 311 (413)
T 3dzo_A 265 --------------------------------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311 (413)
T ss_dssp --------------------------------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred --------------------------------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence 024466 899999999 5556899999999999999999
Q ss_pred CCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhhh
Q 002843 527 GRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA 593 (874)
Q Consensus 527 tG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~~ 593 (874)
+|..||..... .......+ .......+.+.+||.+||+.||.+||++.++|+||||+.+.+...
T Consensus 312 tg~~Pf~~~~~--~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~~~~~ 375 (413)
T 3dzo_A 312 CADLPNTDDAA--LGGSEWIF-RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELS 375 (413)
T ss_dssp HSSCCCCTTGG--GSCSGGGG-SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHHHHH
T ss_pred HCCCCCCCcch--hhhHHHHH-hhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHHHHHHH
Confidence 99999854321 01111111 112244578999999999999999999999999999999876653
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=265.74 Aligned_cols=188 Identities=19% Similarity=0.195 Sum_probs=145.3
Q ss_pred hHHhhcCCCCCceeccceee--cCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVS--NGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVA 340 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~ 340 (874)
.+.+...||+++.++..... .+... .+++||||+|++|.+++.... ..+++.+++.|+.||+.
T Consensus 63 ~~~~~~~h~~i~~~~~~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~ 128 (299)
T 3m2w_A 63 LHWRASQCPHIVRIVDVYENLYAGRKC--------------LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128 (299)
T ss_dssp HHHHHTTSTTBCCEEEEEEEEETTEEE--------------EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHH
T ss_pred HHHHhccCCCchhHHhhhhhhcCCCce--------------EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 45577789999988776542 11111 267999999999999998753 36999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEec---CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQ---SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~---~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
||+|||++||+||||||+|||++. ++.+||+|||+++...
T Consensus 129 ~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~------------------------------------- 171 (299)
T 3m2w_A 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT------------------------------------- 171 (299)
T ss_dssp HHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-------------------------------------
T ss_pred HHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc-------------------------------------
Confidence 999999999999999999999998 7889999999875211
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
T Consensus 172 -------------------------------------------------------------------------------- 171 (299)
T 3m2w_A 172 -------------------------------------------------------------------------------- 171 (299)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHH--HHhhcCCCCCCC-------CCCCHHHHHHHHHcccc
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAM--SDLRDRILPPSF-------LSENPKEAGFCLWQLHP 568 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~--~~l~~~~lpp~~-------~~~~p~l~dLi~~cL~~ 568 (874)
+..|+.++|||||||++|||++|..||....... ..+........+ ...++.+.+||.+||+.
T Consensus 172 --------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 243 (299)
T 3m2w_A 172 --------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 243 (299)
T ss_dssp --------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCS
T ss_pred --------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHccc
Confidence 1246788999999999999999999985433211 111111111111 33467799999999999
Q ss_pred CCCCCCChhHHhhhHHHHhhHh
Q 002843 569 EPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
||.+|||+.|+|+||||.....
T Consensus 244 dP~~Rps~~e~l~hp~~~~~~~ 265 (299)
T 3m2w_A 244 EPTQRMTITEFMNHPWIMQSTK 265 (299)
T ss_dssp STTTSCCHHHHHTSHHHHTGGG
T ss_pred ChhhCCCHHHHhcChhhccccc
Confidence 9999999999999999987553
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-29 Score=301.16 Aligned_cols=206 Identities=21% Similarity=0.214 Sum_probs=159.5
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++......+.... . -.++|||||+|++|.+++.. .+++.+++.|+.
T Consensus 124 ~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~-------~----~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~ 189 (681)
T 2pzi_A 124 AMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD-------P----VGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLL 189 (681)
T ss_dssp HHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC-------E----EEEEEEECCCCEECC----C---CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC-------c----eeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHH
Confidence 445667788888999999999887664433110 0 02679999999999998865 599999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++|||||||||+|||++.+ .+||+|||+++....
T Consensus 190 qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~----------------------------------- 233 (681)
T 2pzi_A 190 EILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS----------------------------------- 233 (681)
T ss_dssp HHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTC-----------------------------------
T ss_pred HHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhccc-----------------------------------
Confidence 99999999999999999999999999874 899999999863220
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.+..+||+
T Consensus 234 ------------------------------------------------------------------------~~~~~gt~ 241 (681)
T 2pzi_A 234 ------------------------------------------------------------------------FGYLYGTP 241 (681)
T ss_dssp ------------------------------------------------------------------------CSCCCCCT
T ss_pred ------------------------------------------------------------------------CCccCCCc
Confidence 02346899
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCC--CCCCHHHHHHHHHccccCCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSF--LSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~--~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
.|+|||++.+. ++.++|||||||+||||++|++|+.... . ..++... ....+.+.+||.+||++||.+||
T Consensus 242 ~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~------~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~ 313 (681)
T 2pzi_A 242 GFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRY------V-DGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRF 313 (681)
T ss_dssp TTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEE------C-SSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSC
T ss_pred cccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccc------c-ccccccccccccCHHHHHHHhhhccCChhhCC
Confidence 99999999865 4899999999999999999998876311 0 1111111 11235688999999999999999
Q ss_pred ChhHHhhhHHHHhhHhhh
Q 002843 575 TTREILQSEVTNEFQEVC 592 (874)
Q Consensus 575 Ta~EiL~hp~~~~~~~~~ 592 (874)
++.++|.|+|+..+++..
T Consensus 314 ~~~~~l~~~l~~~~~~~~ 331 (681)
T 2pzi_A 314 TTAEEMSAQLTGVLREVV 331 (681)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhh
Confidence 999999999998766543
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-29 Score=273.91 Aligned_cols=168 Identities=13% Similarity=0.042 Sum_probs=133.9
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCceEEecCC---------------
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHH-TQGVTFLDLKPSSFKLLQSN--------------- 366 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLH-s~gIIHRDLKPsNILL~~~~--------------- 366 (874)
.+++||||+||+|.+.+.+. .+++.+++.|++||+.||+||| ++|||||||||+||||+.++
T Consensus 137 ~~lv~E~~~~g~ll~~~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~ 214 (336)
T 2vuw_A 137 LFIVLEFEFGGIDLEQMRTK--LSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTI 214 (336)
T ss_dssp EEEEEEEECCCEETGGGTTT--CCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEE
T ss_pred EEEEEEecCCCccHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccc
Confidence 57899999999877777553 6999999999999999999999 99999999999999999887
Q ss_pred -----cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccc
Q 002843 367 -----QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (874)
Q Consensus 367 -----~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~ 441 (874)
.+||+|||+++....
T Consensus 215 ~~~~~~vkL~DFG~a~~~~~------------------------------------------------------------ 234 (336)
T 2vuw_A 215 PSCGLQVSIIDYTLSRLERD------------------------------------------------------------ 234 (336)
T ss_dssp ECTTEEEEECCCTTCBEEET------------------------------------------------------------
T ss_pred cCCCceEEEeeccccEecCC------------------------------------------------------------
Confidence 899999999873220
Q ss_pred cccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHH
Q 002843 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVL 521 (874)
Q Consensus 442 ~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVI 521 (874)
...+||+.|+|||++.+.. +.++||||||++
T Consensus 235 ------------------------------------------------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~ 265 (336)
T 2vuw_A 235 ------------------------------------------------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKK 265 (336)
T ss_dssp ------------------------------------------------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHH
T ss_pred ------------------------------------------------CcEEEeecccChhhhcCCC-ccceehhhhhCC
Confidence 1337899999999999765 899999998777
Q ss_pred -HHHhcCCCCchHHHHH---HHHHhhc-CCCCCCCC-----CCCHHHHHHHHHccccCCCCCCChhHHh-hhHHHH
Q 002843 522 -FFELFGRFDSERALAA---AMSDLRD-RILPPSFL-----SENPKEAGFCLWQLHPEPLSRPTTREIL-QSEVTN 586 (874)
Q Consensus 522 -L~ELltG~~p~~~~~~---~~~~l~~-~~lpp~~~-----~~~p~l~dLi~~cL~~dP~~RPTa~EiL-~hp~~~ 586 (874)
.+++++|+.||..... ....+.. ...+.... ..++.+.+||.+||.+| |+.|+| +||||+
T Consensus 266 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 266 ENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp HHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred CCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 7888999999976421 2223222 12221111 22356889999999977 999999 999984
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6.2e-26 Score=244.85 Aligned_cols=224 Identities=13% Similarity=0.065 Sum_probs=156.6
Q ss_pred cCccccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCCChh---HHHHHHHHhHHh
Q 002843 192 SGNMLSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD---AALKAAGAMMVA 267 (874)
Q Consensus 192 ~~~~~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~l~~ 267 (874)
.+..+..+..+. +.|.+++| |.||++... . .+...+.+.+......+ ......+...+.
T Consensus 24 ~g~~~~~~~y~i~~~lg~G~~------------g~Vy~a~~~----~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~ 86 (286)
T 3uqc_A 24 PGARIANGRYRLLIFHGGVPP------------LQFWQALDT----A-LDRQVALTFVDPQGVLPDDVLQETLSRTLRLS 86 (286)
T ss_dssp TTCEETTTTEEEEEEEEBSTT------------CEEEEEEET----T-TTEEEEEEESCTTCCSCHHHHHHHHHHHHHHH
T ss_pred CCCEEecCcEEEEEEEcccCC------------eEEEEEEec----C-CCceEEEEEECcccccCHHHHHHHHHHHHHHh
Confidence 344344455544 77777655 567777521 0 11222333333332221 234556667778
Q ss_pred hcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002843 268 SNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT 347 (874)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs 347 (874)
...||+++.+++....++.. +++||||+|++|.++++.. ....++..|+.||+.||+|||+
T Consensus 87 ~l~hp~iv~~~~~~~~~~~~----------------~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~ 147 (286)
T 3uqc_A 87 RIDKPGVARVLDVVHTRAGG----------------LVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHR 147 (286)
T ss_dssp TCCCTTBCCEEEEEEETTEE----------------EEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCcceeeEEEEECCcE----------------EEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHH
Confidence 88999999998886654432 4699999999999999543 4667899999999999999999
Q ss_pred CCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccccc
Q 002843 348 QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427 (874)
Q Consensus 348 ~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~ 427 (874)
+||+||||||+|||++.++.+||+++
T Consensus 148 ~givH~Dikp~NIll~~~g~~kl~~~------------------------------------------------------ 173 (286)
T 3uqc_A 148 AGVALSIDHPSRVRVSIDGDVVLAYP------------------------------------------------------ 173 (286)
T ss_dssp TTCCCCCCSGGGEEEETTSCEEECSC------------------------------------------------------
T ss_pred CCCccCCCCcccEEEcCCCCEEEEec------------------------------------------------------
Confidence 99999999999999999998887532
Q ss_pred ccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC
Q 002843 428 SLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG 507 (874)
Q Consensus 428 ~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~ 507 (874)
.|++
T Consensus 174 ---------------------------------------------------------------------~~~~------- 177 (286)
T 3uqc_A 174 ---------------------------------------------------------------------ATMP------- 177 (286)
T ss_dssp ---------------------------------------------------------------------CCCT-------
T ss_pred ---------------------------------------------------------------------cccC-------
Confidence 2333
Q ss_pred CCCCccchhHHHHHHHHhcCCCCchHHHHHH--H----HHhhcCCCCC--CCCCCCHHHHHHHHHccccCCCCCCChhHH
Q 002843 508 VCTTSSNIYSLGVLFFELFGRFDSERALAAA--M----SDLRDRILPP--SFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (874)
Q Consensus 508 ~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~--~----~~l~~~~lpp--~~~~~~p~l~dLi~~cL~~dP~~RPTa~Ei 579 (874)
+++.++|||||||+||||++|..||...... + ..+.....++ ......+.+.+||.+||+.||.+| |+.|+
T Consensus 178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el 256 (286)
T 3uqc_A 178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTL 256 (286)
T ss_dssp TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHH
Confidence 3789999999999999999999888542210 0 0111111111 113445778999999999999999 99999
Q ss_pred hhh
Q 002843 580 LQS 582 (874)
Q Consensus 580 L~h 582 (874)
++.
T Consensus 257 ~~~ 259 (286)
T 3uqc_A 257 LNL 259 (286)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-25 Score=264.46 Aligned_cols=196 Identities=11% Similarity=-0.071 Sum_probs=137.0
Q ss_pred HHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
...+...++.. .|++++.+++....++..+ ||||||+|++|.++|.+.+ .+++. .|+.|
T Consensus 288 ~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~y----------------LVMEyv~G~~L~d~i~~~~-~l~~~---~I~~Q 347 (569)
T 4azs_A 288 LHNEIKFLTQPPAGFDAPAVLAHGENAQSGW----------------LVMEKLPGRLLSDMLAAGE-EIDRE---KILGS 347 (569)
T ss_dssp HHHHHHHHHSCCTTCCCCCEEEEEECSSEEE----------------EEEECCCSEEHHHHHHTTC-CCCHH---HHHHH
T ss_pred HHHHHHHHHhcCCCCCeeEEEEEEEECCEEE----------------EEEecCCCCcHHHHHHhCC-CCCHH---HHHHH
Confidence 34455556555 7889999998887666655 4999999999999998876 67765 48999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++|||||||||+||||+.+|++||+|||+++....+
T Consensus 348 Il~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~----------------------------------- 392 (569)
T 4azs_A 348 LLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD----------------------------------- 392 (569)
T ss_dssp HHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-------------------------------------
T ss_pred HHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCC-----------------------------------
Confidence 999999999999999999999999999999999999998743300
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
....+..+||+.
T Consensus 393 --------------------------------------------------------------------~~~~~t~vGTp~ 404 (569)
T 4azs_A 393 --------------------------------------------------------------------CSWPTNLVQSFF 404 (569)
T ss_dssp ---------------------------------------------------------------------CCSHHHHHHHH
T ss_pred --------------------------------------------------------------------CccccCceechh
Confidence 001145689999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChh
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~ 577 (874)
|||||++.+ .+..++|+||+|+++++|.++..++.... .. .++. ...+..+...++..+|..||...
T Consensus 405 YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~~~~l------~~--~~~~----~~~~~~l~~~l~~~~~~~~~~~~ 471 (569)
T 4azs_A 405 VFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNWLYAV------WQ--EPVE----RWNFVLLLALFEKKAKLPSAEQQ 471 (569)
T ss_dssp HHHHHHC------------------CCCCTTHHHHHHHH------HT--SCGG----GCSHHHHHHHHHTGGGSCCGGGS
T ss_pred hccHHHhCC-CCCCcccccccccchhhhccccchhHHHh------hc--CCCC----CCcHHHHHHHHhCCCCCCCCChh
Confidence 999999986 56788999999999999988866653221 11 0110 11245677788899999999999
Q ss_pred HHhhhHHHHhhHh
Q 002843 578 EILQSEVTNEFQE 590 (874)
Q Consensus 578 EiL~hp~~~~~~~ 590 (874)
....++|......
T Consensus 472 ~~~~~~~~~~~~~ 484 (569)
T 4azs_A 472 RGATEQWIIAQET 484 (569)
T ss_dssp SCCHHHHHHHHHH
T ss_pred hhccchhHHHHHh
Confidence 8889998875543
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=6.2e-19 Score=207.15 Aligned_cols=95 Identities=19% Similarity=0.005 Sum_probs=78.0
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++........... .+++||||+|++|.+++.. ++.|+.||
T Consensus 386 ~~~E~~il~~l~h~nIv~~~~~~~~~~~----------------~~lVmE~~~ggsL~~~l~~---------~~~i~~qi 440 (540)
T 3en9_A 386 TAREARYLALVKDFGIPAPYIFDVDLDN----------------KRIMMSYINGKLAKDVIED---------NLDIAYKI 440 (540)
T ss_dssp HHHHHHHHHHGGGGTCCCCCEEEEETTT----------------TEEEEECCCSEEHHHHSTT---------CTHHHHHH
T ss_pred HHHHHHHHHhcCCCCcCceEEEEEeCCc----------------cEEEEECCCCCCHHHHHHH---------HHHHHHHH
Confidence 4666777888889988844332222221 2679999999999999976 56899999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
+.||+|||++||+||||||+|||++. .+||+|||+++...
T Consensus 441 ~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 441 GEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp HHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred HHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 99999999999999999999999998 99999999998544
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=6.1e-15 Score=159.03 Aligned_cols=65 Identities=11% Similarity=-0.050 Sum_probs=58.3
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccch
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
+++||||+|++|.+ +.. .+...++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++
T Consensus 176 ~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~ 240 (282)
T 1zar_A 176 AVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSV 240 (282)
T ss_dssp EEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCE
T ss_pred EEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCe
Confidence 67999999999998 421 23457999999999999999999999999999999 9999999999876
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.38 E-value=9.5e-13 Score=145.79 Aligned_cols=78 Identities=14% Similarity=0.118 Sum_probs=67.8
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-c-CCCceeEEEEeCCCCCEEEEeeCCC
Q 002843 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-S-NRSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~-~~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
.+.+|...|.+|+|+|||++|||||.|++|+|||+.++ .++..+ . |...|.+|+||| ++.+|||||.|+
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~--------~~~~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~ 334 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL--------SMSKIFKQAHSFAITEVTISP-DSTYVASVSAAN 334 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT--------EEEEEETTSSSSCEEEEEECT-TSCEEEEEETTS
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC--------cEEEEecCcccCCEEEEEECC-CCCEEEEEeCCC
Confidence 45567899999999999999999999999999999986 344443 3 567899999999 588999999999
Q ss_pred cEEEEeCCC
Q 002843 852 VVKVCMSCR 860 (874)
Q Consensus 852 ~V~~WD~~~ 860 (874)
+|+|||+..
T Consensus 335 tvrvw~ip~ 343 (365)
T 4h5i_A 335 TIHIIKLPL 343 (365)
T ss_dssp EEEEEECCT
T ss_pred eEEEEEcCC
Confidence 999999953
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.3e-12 Score=138.77 Aligned_cols=106 Identities=20% Similarity=0.163 Sum_probs=83.3
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~ 832 (874)
+..+++...+.+.+.+++ +|...|.+|+|+|||++|||||.|++|+|||+++. ..+..+. |.+.|.
T Consensus 186 g~i~iwd~~~~~~~~~~~-----~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~--------~~~~~~~~h~~~v~ 252 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLE-----GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA--------NLAGTLSGHASWVL 252 (321)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC--------CEEEEECCCSSCEE
T ss_pred CeEEEEECCCCcEEEEEc-----ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc--------ceeEEEcCCCCceE
Confidence 344555566666777765 35889999999999999999999999999999875 2233444 567899
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeeee
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
+|+|+| ++.+||||+.||+|+|||+.+++. +..+...|.+
T Consensus 253 ~~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~ 295 (321)
T 3ow8_A 253 NVAFCP-DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWG 295 (321)
T ss_dssp EEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred EEEECC-CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEE
Confidence 999999 578999999999999999998754 5556655554
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.34 E-value=2.3e-12 Score=138.21 Aligned_cols=106 Identities=15% Similarity=0.167 Sum_probs=86.7
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~ 832 (874)
+..+++.+.+...+.+++ +|...|.+++|+|++.+|||||.|++|+|||+.++ .++..+. |.+.|.
T Consensus 35 g~v~lWd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~--------~~~~~~~~h~~~v~ 101 (304)
T 2ynn_A 35 GRVELWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--------EKVVDFEAHPDYIR 101 (304)
T ss_dssp SEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEE
T ss_pred CcEEEEECCCCceeEEee-----ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC--------cEEEEEeCCCCcEE
Confidence 556778887777777776 24789999999999999999999999999999976 2344444 567899
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCc----cceeeeeeeeee
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRL----STYCFRKKFVFT 873 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~----~~~~~~~~f~~~ 873 (874)
+|+|+|. +.+||||+.||+|+|||+.++ +.+.+|...|.+
T Consensus 102 ~~~~~~~-~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~ 145 (304)
T 2ynn_A 102 SIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMC 145 (304)
T ss_dssp EEEECSS-SSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEE
T ss_pred EEEEcCC-CCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEE
Confidence 9999994 789999999999999999875 236677777665
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.9e-12 Score=141.27 Aligned_cols=102 Identities=9% Similarity=0.075 Sum_probs=81.5
Q ss_pred hhccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCce
Q 002843 753 DGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKL 831 (874)
Q Consensus 753 ~~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v 831 (874)
++..+++...+.+.+..++. .+.+|.+.|.+|+|+|||++|||||.|++|+|||+.+. .++..+. |.+.|
T Consensus 102 dg~v~lWd~~~~~~~~~~~~-~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~--------~~~~~~~~h~~~V 172 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKF-CKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ--------VVLSSYRAHAAQV 172 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEE-EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCEEEEEeccCCCceeEeec-cccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------cEEEEEcCcCCce
Confidence 34556666655555444431 23468999999999999999999999999999999976 3444554 56789
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 832 SCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 832 ~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
.+++|+|....+||||+.||+|+|||+.+++.
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~ 204 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPKP 204 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTSSSC
T ss_pred EEEEecCCCCCceeeeccccccccccccccce
Confidence 99999998778999999999999999998754
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.32 E-value=5.3e-12 Score=134.92 Aligned_cols=93 Identities=22% Similarity=0.206 Sum_probs=73.0
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCC-CCCEEEEeeCCCc
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNY-IKNYLASADYDGV 852 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~-~~~~laS~~~Dg~ 852 (874)
+.+|.+.|.+++|+|||++|||||.|++|+|||+.+.. ..++..+. |.+.|.+|+|+|. .+++||||+.||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~------~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC------cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 34689999999999999999999999999999997531 12344444 5678999999864 4789999999999
Q ss_pred EEEEeCCCcc--c---eeeeeeeeee
Q 002843 853 VKVCMSCRLS--T---YCFRKKFVFT 873 (874)
Q Consensus 853 V~~WD~~~~~--~---~~~~~~f~~~ 873 (874)
|+|||+.+++ . +..|...|++
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~ 104 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNS 104 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEE
T ss_pred EEEEEcCCCceEEEEEeecCCCceeE
Confidence 9999998753 1 3445555543
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.31 E-value=4.8e-12 Score=135.73 Aligned_cols=89 Identities=10% Similarity=0.169 Sum_probs=75.1
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKV 855 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~ 855 (874)
+|++.|.+|+|+|||.+|||||.|++|+|||+.+. ..+..+. +...|.+++|+| ++++||+|+.||+|+|
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~--------~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ--------VEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRV 81 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--------ceeEEeeccCCcEEEEEEeC-CCCEEEEECCCCEEEE
Confidence 45999999999999999999999999999999876 2334444 556899999999 5889999999999999
Q ss_pred EeCCCccc---eeeeeeeeeeC
Q 002843 856 CMSCRLST---YCFRKKFVFTL 874 (874)
Q Consensus 856 WD~~~~~~---~~~~~~f~~~~ 874 (874)
||+.+++. +..|...|.++
T Consensus 82 wd~~~~~~~~~~~~h~~~v~~~ 103 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHPDYIRSI 103 (304)
T ss_dssp EETTTCCEEEEEECCSSCEEEE
T ss_pred EECCCCcEEEEEeCCCCcEEEE
Confidence 99998754 67777777653
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2.6e-12 Score=143.49 Aligned_cols=101 Identities=12% Similarity=0.021 Sum_probs=78.1
Q ss_pred cceeeeeceeEeEEecccCCCCCCCCeeEEEECC--------CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecC
Q 002843 756 CKYARYSKFEVQGMLRTGEFNNSANVICSISFDR--------DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSN 827 (874)
Q Consensus 756 ~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~--------d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~ 827 (874)
.+.+..........-.-+.+.+|.+.|++|+|+| ||++|||||.|++|||||+.+. ........+
T Consensus 113 v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~-------~~~~~~~~~ 185 (393)
T 4gq1_A 113 VRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE-------GPILAGYPL 185 (393)
T ss_dssp EEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT-------EEEEEEEEC
T ss_pred EEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC-------ceeeeecCC
Confidence 3444444333332222356788999999999998 9999999999999999999865 122333567
Q ss_pred CCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 828 RSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 828 ~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
++.|.+|+|+|.++++||||+.||+|+|||+.+++.
T Consensus 186 ~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 186 SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLS 221 (393)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-
T ss_pred CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcc
Confidence 889999999998778999999999999999987654
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.30 E-value=4.1e-12 Score=142.67 Aligned_cols=106 Identities=18% Similarity=0.216 Sum_probs=83.9
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~ 832 (874)
+..+.+.+.+.+.+.+++ +|.+.|.+|+|+|+|++|||||.|++|+|||+.+. ..+..+. |...|.
T Consensus 130 g~i~vwd~~~~~~~~~l~-----~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~--------~~~~~~~~h~~~V~ 196 (410)
T 1vyh_C 130 ATIKVWDYETGDFERTLK-----GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--------ECIRTMHGHDHNVS 196 (410)
T ss_dssp SCEEEEETTTCCCCEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS--------CEEECCCCCSSCEE
T ss_pred CeEEEEECCCCcEEEEEe-----ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--------ceeEEEcCCCCCEE
Confidence 445666666666666665 45899999999999999999999999999999875 2333343 457899
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeeee
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
+|+|+| ++.+|+||+.||+|++||+.+++. +..|...|.+
T Consensus 197 ~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~ 239 (410)
T 1vyh_C 197 SVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239 (410)
T ss_dssp EEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred EEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEE
Confidence 999999 578999999999999999998754 5566655543
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.3e-11 Score=136.03 Aligned_cols=107 Identities=14% Similarity=0.159 Sum_probs=84.3
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCC-EEEEecCCCcEEEeeCCCCCCCCcccccCeeeec---CCC
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS---NRS 829 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~-~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~---~~~ 829 (874)
+..+++...+.+++.++. +|.+.|.+++|+|++. +|||||.|++|+|||+++. .++..+. +..
T Consensus 149 ~~i~iwd~~~~~~~~~~~-----~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~--------~~~~~~~~~~~~~ 215 (344)
T 4gqb_B 149 ICIKVWDLAQQVVLSSYR-----AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP--------KPASQIGCSAPGY 215 (344)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS--------SCEEECC----CC
T ss_pred CeEEEEECCCCcEEEEEc-----CcCCceEEEEecCCCCCceeeecccccccccccccc--------ceeeeeecceeec
Confidence 456777777778887775 3599999999999996 6999999999999999976 2333332 334
Q ss_pred ceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeeee
Q 002843 830 KLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 830 ~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
.+.+++|+|.+..+||+|+.||+|+|||+.+++. +..|..-|++
T Consensus 216 ~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~ 262 (344)
T 4gqb_B 216 LPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTG 262 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEE
T ss_pred cceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEE
Confidence 6899999998889999999999999999997754 6667666654
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.27 E-value=8.1e-12 Score=137.74 Aligned_cols=92 Identities=9% Similarity=0.099 Sum_probs=73.0
Q ss_pred ceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCC-EEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEE
Q 002843 757 KYARYSKFEVQGMLRTGEFNNSANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVC 835 (874)
Q Consensus 757 ~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~-~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~ 835 (874)
+++...+.+.+.++ .+|.+.|.+|+|+|++. +|||||.|++|+|||+.+. ..+..+.|.+.|.+|+
T Consensus 252 ~~wd~~~~~~~~~~-----~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~--------~~~~~~~H~~~V~~va 318 (357)
T 4g56_B 252 SLVNIKNPDSAQTS-----AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS--------EVFRDLSHRDFVTGVA 318 (357)
T ss_dssp EEEESSCGGGCEEE-----CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC--------EEEEECCCSSCEEEEE
T ss_pred eEEECCCCcEeEEE-----eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC--------cEeEECCCCCCEEEEE
Confidence 44444444444444 34689999999999985 7999999999999999875 3344566788999999
Q ss_pred EeCCCCCEEEEeeCCCcEEEEeCCCc
Q 002843 836 WNNYIKNYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 836 wnp~~~~~laS~~~Dg~V~~WD~~~~ 861 (874)
|+|.++.+||||+.||+|++||+.+.
T Consensus 319 fsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 319 WSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 99988899999999999999999753
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.27 E-value=4.1e-12 Score=137.23 Aligned_cols=93 Identities=17% Similarity=0.170 Sum_probs=70.1
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCC-CCCEEEEeeCCCc
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNY-IKNYLASADYDGV 852 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~-~~~~laS~~~Dg~ 852 (874)
+.+|.+.|.+|+|+|||++|||||.|++|||||+.+.. ...+..+. |.+.|.+|+|+|. ++++||||+.||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~------~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG------QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK 82 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE------EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC------cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence 44689999999999999999999999999999998641 11233343 6678999999863 4789999999999
Q ss_pred EEEEeCCCcc--c---eeeeeeeeee
Q 002843 853 VKVCMSCRLS--T---YCFRKKFVFT 873 (874)
Q Consensus 853 V~~WD~~~~~--~---~~~~~~f~~~ 873 (874)
|+|||+.+++ . +..|...|++
T Consensus 83 v~iWd~~~~~~~~~~~~~~h~~~V~~ 108 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHAGHDSSVNS 108 (316)
T ss_dssp EEEECCSSSCCCEEEEECCCSSCCCE
T ss_pred EEEEECCCCcceEEEEccCCCCceEE
Confidence 9999998752 1 4456665554
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.5e-11 Score=133.58 Aligned_cols=93 Identities=17% Similarity=0.243 Sum_probs=69.0
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
.+|.+.|.+|+|+|||++|||||.|++|+|||++.... ...++..+. |...|.+|+|+| +..+||||+.||+|+
T Consensus 104 ~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~----~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~ 178 (330)
T 2hes_X 104 EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE----EYECISVLQEHSQDVKHVIWHP-SEALLASSSYDDTVR 178 (330)
T ss_dssp C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC----CCEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSCEE
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC----CeEEEEEeccCCCceEEEEECC-CCCEEEEEcCCCeEE
Confidence 35689999999999999999999999999999954211 012233343 557899999999 578999999999999
Q ss_pred EEeCCCc-----cceeeeeeeeee
Q 002843 855 VCMSCRL-----STYCFRKKFVFT 873 (874)
Q Consensus 855 ~WD~~~~-----~~~~~~~~f~~~ 873 (874)
|||+.++ ..+.+|...|.+
T Consensus 179 iW~~~~~~~~~~~~~~~h~~~v~~ 202 (330)
T 2hes_X 179 IWKDYDDDWECVAVLNGHEGTVWS 202 (330)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEE
T ss_pred EEECCCCCeeEEEEccCCCCcEEE
Confidence 9998754 225666666544
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.4e-11 Score=133.24 Aligned_cols=89 Identities=13% Similarity=0.162 Sum_probs=72.1
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCCCEEEEeeCCCcE
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIKNYLASADYDGVV 853 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~Dg~V 853 (874)
+.+|...|.+++|+|||.+|||||.|++|||||+.++ .++..+ .|.+.|.+|+|+| +..+||||+.||+|
T Consensus 61 ~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~--------~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i 131 (319)
T 3frx_A 61 FKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATG--------ETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTI 131 (319)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCE
T ss_pred EeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCC--------CeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeE
Confidence 3457999999999999999999999999999999976 234444 4667899999999 58899999999999
Q ss_pred EEEeCCCcc--ceeeeeeeee
Q 002843 854 KVCMSCRLS--TYCFRKKFVF 872 (874)
Q Consensus 854 ~~WD~~~~~--~~~~~~~f~~ 872 (874)
+|||+.... .+..|...|.
T Consensus 132 ~vwd~~~~~~~~~~~h~~~v~ 152 (319)
T 3frx_A 132 KVWTIKGQCLATLLGHNDWVS 152 (319)
T ss_dssp EEEETTSCEEEEECCCSSCEE
T ss_pred EEEECCCCeEEEEeccCCcEE
Confidence 999997532 2445544443
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.4e-11 Score=142.48 Aligned_cols=89 Identities=19% Similarity=0.179 Sum_probs=71.6
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcE
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVV 853 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V 853 (874)
|.+|++.|.+|+|+|||++|||||.|++|+|||... .++..+. |.+.|.||+|+| ++.+|||++.|++|
T Consensus 12 L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~~---------~~~~~l~gh~~~V~~l~fsp-dg~~las~~~d~~i 81 (577)
T 2ymu_A 12 LEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG---------QLLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTV 81 (577)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS---------CEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred ECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCC---------CEEEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEE
Confidence 667899999999999999999999999999999542 2334444 567899999999 57899999999999
Q ss_pred EEEeCCCc--cceeeeeeeeee
Q 002843 854 KVCMSCRL--STYCFRKKFVFT 873 (874)
Q Consensus 854 ~~WD~~~~--~~~~~~~~f~~~ 873 (874)
+|||+... +.+..+..-|.+
T Consensus 82 ~vWd~~~~~~~~~~~~~~~v~~ 103 (577)
T 2ymu_A 82 KLWNRNGQLLQTLTGHSSSVRG 103 (577)
T ss_dssp EEEETTSCEEEEECCCSSCEEE
T ss_pred EEEECCCCEEEEEECCCCCEEE
Confidence 99998643 225555555543
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.24 E-value=1.9e-11 Score=134.42 Aligned_cols=77 Identities=17% Similarity=0.189 Sum_probs=67.7
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCc-EEEeeCCCCCCCCcccccCeeeec---CCCceeEEEEeCCCCCEEEEeeCCC
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKK-IKIFEFNALFNDSVDVYYPAVEMS---NRSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~-Ikiwd~~~~~~~~~~~~~p~~~~~---~~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
.+|.+.|.+|+|+|||.+|||||.|++ |+|||++++ .++..+. |...|.+|+|+| ++.+||||+.||
T Consensus 192 ~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~--------~~~~~~~~g~h~~~v~~~~~s~-~~~~l~s~s~d~ 262 (355)
T 3vu4_A 192 KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG--------VLVREFRRGLDRADVVDMKWST-DGSKLAVVSDKW 262 (355)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC--------CEEEEEECTTCCSCEEEEEECT-TSCEEEEEETTC
T ss_pred EccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC--------cEEEEEEcCCCCCcEEEEEECC-CCCEEEEEECCC
Confidence 456999999999999999999999999 999999976 3444554 667899999999 588999999999
Q ss_pred cEEEEeCCCc
Q 002843 852 VVKVCMSCRL 861 (874)
Q Consensus 852 ~V~~WD~~~~ 861 (874)
+|+|||+...
T Consensus 263 ~v~iw~~~~~ 272 (355)
T 3vu4_A 263 TLHVFEIFND 272 (355)
T ss_dssp EEEEEESSCC
T ss_pred EEEEEEccCC
Confidence 9999999864
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.23 E-value=3.8e-11 Score=130.79 Aligned_cols=97 Identities=11% Similarity=0.172 Sum_probs=75.4
Q ss_pred CCCCCCCeeEEEE-----CC-CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEe
Q 002843 775 FNNSANVICSISF-----DR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASA 847 (874)
Q Consensus 775 ~~~~~~~V~si~F-----~~-d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~ 847 (874)
+.+|.++|.+|+| ++ |+.+|||||.|++|+|||+.+...... ...+...+. |...|.+|+|+| ++.+||||
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~-~~~~~~~l~~h~~~V~~~~~~~-~~~~l~s~ 94 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY-FGIPHKALTGHNHFVSDLALSQ-ENCFAISS 94 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB-SEEEEEEECCCSSCEEEEEECS-STTEEEEE
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc-cccccchhccCCCceEEEEECC-CCCEEEEE
Confidence 3457999999999 77 999999999999999999986421111 112344444 567899999999 57899999
Q ss_pred eCCCcEEEEeCCCccc---eeeeeeeeee
Q 002843 848 DYDGVVKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 848 ~~Dg~V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
+.||+|+|||+.+++. +.+|...|.+
T Consensus 95 s~D~~v~lwd~~~~~~~~~~~~h~~~v~~ 123 (343)
T 2xzm_R 95 SWDKTLRLWDLRTGTTYKRFVGHQSEVYS 123 (343)
T ss_dssp ETTSEEEEEETTSSCEEEEEECCCSCEEE
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCCcEEE
Confidence 9999999999998744 6667666654
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=3.1e-11 Score=131.11 Aligned_cols=90 Identities=16% Similarity=0.251 Sum_probs=73.9
Q ss_pred ccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeE
Q 002843 755 LCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSC 833 (874)
Q Consensus 755 l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~ 833 (874)
..+++.....+.+.++. +|...|.+|+|+|||.+|||||.|++|+|||+.+. .++..+ .|...|.+
T Consensus 229 ~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~--------~~~~~~~~h~~~v~~ 295 (321)
T 3ow8_A 229 YIKIYDVQHANLAGTLS-----GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR--------TCVHTFFDHQDQVWG 295 (321)
T ss_dssp CEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCEEE
T ss_pred eEEEEECCCcceeEEEc-----CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC--------EEEEEEcCCCCcEEE
Confidence 34555555556666554 46899999999999999999999999999999876 334444 46678999
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEeC
Q 002843 834 VCWNNYIKNYLASADYDGVVKVCMS 858 (874)
Q Consensus 834 l~wnp~~~~~laS~~~Dg~V~~WD~ 858 (874)
|+|+| ++.+|||++.||+|+|||+
T Consensus 296 v~~s~-~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 296 VKYNG-NGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEECT-TSSEEEEEETTCCEEEEEC
T ss_pred EEECC-CCCEEEEEeCCCeEEEEeC
Confidence 99999 5789999999999999996
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=3.6e-11 Score=131.46 Aligned_cols=79 Identities=15% Similarity=0.152 Sum_probs=66.5
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
.+|...|.+|+|+|||.+|||||.|++|+|||+.+.. . ..+..+. |...|.+|+|+| ++++||||+.||+|+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~-----~-~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~ 130 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-----F-ECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVW 130 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC------E-EEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC-----e-EEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEE
Confidence 3679999999999999999999999999999987641 1 1233443 567899999999 588999999999999
Q ss_pred EEeCCCc
Q 002843 855 VCMSCRL 861 (874)
Q Consensus 855 ~WD~~~~ 861 (874)
|||+..+
T Consensus 131 iwd~~~~ 137 (345)
T 3fm0_A 131 VWEVDEE 137 (345)
T ss_dssp EEEECTT
T ss_pred EEECCCC
Confidence 9999764
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=1.6e-11 Score=137.71 Aligned_cols=90 Identities=11% Similarity=0.117 Sum_probs=74.5
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcE
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVV 853 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V 853 (874)
+.+|.+.|.+++|+|++.+|||||.|++|+|||+.++ .....+. |...|.+|+|+| ++.+||||+.||+|
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~--------~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG--------DFERTLKGHTDSVQDISFDH-SGKLLASCSADMTI 174 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC--------CCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCC
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--------cEEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeE
Confidence 3467999999999999999999999999999999976 2233444 567899999999 57799999999999
Q ss_pred EEEeCCCccc---eeeeeeeeee
Q 002843 854 KVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 854 ~~WD~~~~~~---~~~~~~f~~~ 873 (874)
+|||+.+++. +.+|...|.+
T Consensus 175 ~iwd~~~~~~~~~~~~h~~~V~~ 197 (410)
T 1vyh_C 175 KLWDFQGFECIRTMHGHDHNVSS 197 (410)
T ss_dssp CEEETTSSCEEECCCCCSSCEEE
T ss_pred EEEeCCCCceeEEEcCCCCCEEE
Confidence 9999987643 5666666654
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.23 E-value=4.7e-11 Score=127.45 Aligned_cols=94 Identities=15% Similarity=0.197 Sum_probs=73.7
Q ss_pred eeceeEeEEecccCCCCCCCCeeEEEECCC-CCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeC
Q 002843 761 YSKFEVQGMLRTGEFNNSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNN 838 (874)
Q Consensus 761 y~~~~~~~~l~~~~~~~~~~~V~si~F~~d-~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp 838 (874)
..++...+||+ ||.+.|.+|+|+|+ +++|||||.|++|||||+.+.... ...|...+. |...|.+++|+|
T Consensus 25 ~~~~~l~~tL~-----GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~---~~~~~~~l~~h~~~V~~~~~s~ 96 (340)
T 4aow_A 25 TEQMTLRGTLK-----GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN---YGIPQRALRGHSHFVSDVVISS 96 (340)
T ss_dssp -CEEEEEEEEC-----CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC---SEEEEEEECCCSSCEEEEEECT
T ss_pred CCceEEEEEEC-----CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc---cceeeEEEeCCCCCEEEEEECC
Confidence 34455666665 56999999999998 579999999999999999865211 113445554 557899999999
Q ss_pred CCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 839 YIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 839 ~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
++.+||||+.||.|++||......
T Consensus 97 -dg~~l~s~~~d~~i~~~~~~~~~~ 120 (340)
T 4aow_A 97 -DGQFALSGSWDGTLRLWDLTTGTT 120 (340)
T ss_dssp -TSSEEEEEETTSEEEEEETTTTEE
T ss_pred -CCCEEEEEcccccceEEeecccce
Confidence 588999999999999999987533
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.21 E-value=3.2e-11 Score=130.39 Aligned_cols=95 Identities=12% Similarity=0.117 Sum_probs=75.7
Q ss_pred CCCCCCCeeEEEECCCC-CEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCc
Q 002843 775 FNNSANVICSISFDRDE-DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~-~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
+.+|.+.|.+|+|+|++ .+|||||.|++|+|||+.+... ....|+..+. |...|.+++|+| ++.+||||+.||+
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~---~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~ 88 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ---KFGVPVRSFKGHSHIVQDCTLTA-DGAYALSASWDKT 88 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT---EEEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSE
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc---cccccceEEeCCcccEEEEEECC-CCCEEEEEeCCCE
Confidence 45679999999999976 7999999999999999875311 1123555555 557899999999 5889999999999
Q ss_pred EEEEeCCCccc---eeeeeeeeee
Q 002843 853 VKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 853 V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
|+|||+.+++. +.+|..-|.+
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~ 112 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMS 112 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEE
T ss_pred EEEEECCCCCeeEEEccCCCcEEE
Confidence 99999998744 6667766654
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.21 E-value=3.9e-11 Score=131.17 Aligned_cols=91 Identities=21% Similarity=0.272 Sum_probs=72.2
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCCCEEEEeeCCCcEEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIKNYLASADYDGVVKV 855 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~ 855 (874)
+|.+.|.+|+|+|||.+|||||.|++|+|||+++.. ....+..+ .|...|.+|+|+| ++.+||||+.||+|+|
T Consensus 103 ~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~-----~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~~ 176 (345)
T 3fm0_A 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED-----EYECVSVLNSHTQDVKHVVWHP-SQELLASASYDDTVKL 176 (345)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS-----CEEEEEEECCCCSCEEEEEECS-SSSCEEEEETTSCEEE
T ss_pred CCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC-----CeEEEEEecCcCCCeEEEEECC-CCCEEEEEeCCCcEEE
Confidence 468999999999999999999999999999998641 11122333 3567899999999 4789999999999999
Q ss_pred EeCCCcc-----ceeeeeeeeee
Q 002843 856 CMSCRLS-----TYCFRKKFVFT 873 (874)
Q Consensus 856 WD~~~~~-----~~~~~~~f~~~ 873 (874)
||+..++ .+..|...|.+
T Consensus 177 w~~~~~~~~~~~~~~~h~~~v~~ 199 (345)
T 3fm0_A 177 YREEEDDWVCCATLEGHESTVWS 199 (345)
T ss_dssp EEEETTEEEEEEEECCCSSCEEE
T ss_pred EEecCCCEEEEEEecCCCCceEE
Confidence 9998652 25666666654
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.21 E-value=5.4e-11 Score=129.59 Aligned_cols=106 Identities=13% Similarity=0.090 Sum_probs=80.5
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCC---Cc
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR---SK 830 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~---~~ 830 (874)
+..+++...+...+.++. +|...|.+|+|+|+|.+|||||.|++|+|||+++. .++..+.+. ..
T Consensus 206 ~~v~~wd~~~~~~~~~~~-----~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~--------~~~~~~~~~~~~~~ 272 (340)
T 1got_B 206 ASAKLWDVREGMCRQTFT-----GHESDINAICFFPNGNAFATGSDDATCRLFDLRAD--------QELMTYSHDNIICG 272 (340)
T ss_dssp SCEEEEETTTCSEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCTTCCSC
T ss_pred CcEEEEECCCCeeEEEEc-----CCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC--------cEEEEEccCCcccc
Confidence 334444444445555543 46889999999999999999999999999999875 222333322 36
Q ss_pred eeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeeee
Q 002843 831 LSCVCWNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 831 v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
|.+++|+| ++.+||+|+.||+|+|||+.+++. +.+|...|.+
T Consensus 273 v~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~ 317 (340)
T 1got_B 273 ITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSC 317 (340)
T ss_dssp EEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred eEEEEECC-CCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEE
Confidence 99999999 588999999999999999987643 6677776654
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=5.4e-11 Score=132.42 Aligned_cols=97 Identities=14% Similarity=0.159 Sum_probs=79.9
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeE
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSC 833 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~ 833 (874)
+..+.+...+.+++.+++ +|...|.+|+|+|+|++|||||.|++|+|||+++. .....+.++..|.+
T Consensus 145 ~~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~--------~~~~~~~~~~~v~~ 211 (393)
T 1erj_A 145 RLIRIWDIENRKIVMILQ-----GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG--------QCSLTLSIEDGVTT 211 (393)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEE
T ss_pred CeEEEEECCCCcEEEEEc-----cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC--------eeEEEEEcCCCcEE
Confidence 345566666666666665 45889999999999999999999999999999876 23344556778999
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 834 VCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 834 l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
++|+|.++.+||+|+.||+|+|||+.+++.
T Consensus 212 ~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~ 241 (393)
T 1erj_A 212 VAVSPGDGKYIAAGSLDRAVRVWDSETGFL 241 (393)
T ss_dssp EEECSTTCCEEEEEETTSCEEEEETTTCCE
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 999997789999999999999999987643
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=7.7e-12 Score=132.65 Aligned_cols=72 Identities=15% Similarity=0.026 Sum_probs=61.0
Q ss_pred CceEeeccCC-C----CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCceEEecCCcEEEeccccc
Q 002843 303 GLRQGSSDHG-V----NLREWLNARGHKGKRIECLYIFRQIVALVDYHH-TQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (874)
Q Consensus 303 ~~lvMEy~~G-g----sL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLH-s~gIIHRDLKPsNILL~~~~~vKLiDFGla 376 (874)
.+++||||.+ | +|.+++.. +++.++..++.||+.||.||| ++|||||||||+|||++. .++|+|||++
T Consensus 143 ~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a 216 (258)
T 1zth_A 143 NVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQA 216 (258)
T ss_dssp TEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTC
T ss_pred CEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECccc
Confidence 3689999942 3 88887543 345678899999999999999 999999999999999988 9999999999
Q ss_pred hhcc
Q 002843 377 KETL 380 (874)
Q Consensus 377 r~~~ 380 (874)
....
T Consensus 217 ~~~~ 220 (258)
T 1zth_A 217 VTLR 220 (258)
T ss_dssp EETT
T ss_pred ccCC
Confidence 7544
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.20 E-value=5.3e-11 Score=127.00 Aligned_cols=103 Identities=13% Similarity=0.116 Sum_probs=73.6
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCC-CcccccC-----------
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFND-SVDVYYP----------- 821 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~-~~~~~~p----------- 821 (874)
+..+++...+.+++.++. +|.+.|.+|+|+|||++|||||.|++|+|||+.+.... ....+.+
T Consensus 195 ~~i~i~d~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 269 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHI-----GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRY 269 (340)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSS
T ss_pred CEEEEEECCCCceeeEec-----CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCc
Confidence 344566666666766664 35889999999999999999999999999999874110 0000000
Q ss_pred --------------------eee----------ecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 822 --------------------AVE----------MSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 822 --------------------~~~----------~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
+.+ ..+...|.+|+|+| ++++||||+.||+|+|||+.+|+
T Consensus 270 ~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 270 WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECT-TSSEEEEEETTSCEEEEEEEC--
T ss_pred eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEeCCCcC
Confidence 001 12445799999999 57899999999999999999875
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.19 E-value=3.3e-11 Score=130.89 Aligned_cols=95 Identities=16% Similarity=0.174 Sum_probs=67.3
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKV 855 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~ 855 (874)
+|...|.+|+|+|+|.+|||||.|++|+|||+.......... .++..+. |...|.+|+|+| ++.+||||+.||+|+|
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~-~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~i 133 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEM-DLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWI 133 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCC-EEEEEEC----CEEEEEECT-TSCEEEEEETTSCEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccc-eeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEEE
Confidence 378999999999999999999999999999986431111111 2233444 567899999999 5889999999999999
Q ss_pred EeCCC-c------cceeeeeeeeee
Q 002843 856 CMSCR-L------STYCFRKKFVFT 873 (874)
Q Consensus 856 WD~~~-~------~~~~~~~~f~~~ 873 (874)
||+.. + ..+..|...|.+
T Consensus 134 wd~~~~~~~~~~~~~~~~h~~~v~~ 158 (330)
T 2hes_X 134 WETDESGEEYECISVLQEHSQDVKH 158 (330)
T ss_dssp EECCTTCCCCEEEEEECCCSSCEEE
T ss_pred EeccCCCCCeEEEEEeccCCCceEE
Confidence 99943 2 124556655554
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.19 E-value=5.5e-11 Score=126.82 Aligned_cols=89 Identities=20% Similarity=0.259 Sum_probs=72.7
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
.+|...|.+|+|+|||++|||||.|++|+|||+.+. .....+ .|...|.+++|+| ++++||+|+.||+|+
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~--------~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--------KFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLK 90 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------CEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCc--------ccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEE
Confidence 346999999999999999999999999999998865 122333 3567899999999 578999999999999
Q ss_pred EEeCCCccc---eeeeeeeeee
Q 002843 855 VCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 855 ~WD~~~~~~---~~~~~~f~~~ 873 (874)
|||+.+++. +..+...|.+
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~ 112 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFC 112 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEE
Confidence 999997643 5556655543
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.19 E-value=3.1e-11 Score=136.13 Aligned_cols=79 Identities=9% Similarity=0.102 Sum_probs=65.2
Q ss_pred CCCCCeeEEEECCC-CCEEEEecCCCcEEEeeCCCCCCCCcccccCeee-ecCCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 777 NSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE-MSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 777 ~~~~~V~si~F~~d-~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~-~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
.|...|.||+|+|. +.+|||||.|++|+|||+.+... ..+.. ..|.+.|.||+|+|.++++||||+.||+|+
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~------~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK------PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC------CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc------eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 34778999999994 56899999999999999987521 11222 346788999999998889999999999999
Q ss_pred EEeCCCc
Q 002843 855 VCMSCRL 861 (874)
Q Consensus 855 ~WD~~~~ 861 (874)
|||+.+.
T Consensus 191 iwd~~~~ 197 (435)
T 4e54_B 191 LQDFKGN 197 (435)
T ss_dssp EEETTSC
T ss_pred EeeccCC
Confidence 9999864
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.19 E-value=8.9e-11 Score=127.89 Aligned_cols=97 Identities=12% Similarity=0.178 Sum_probs=78.2
Q ss_pred hhccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCce
Q 002843 753 DGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKL 831 (874)
Q Consensus 753 ~~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v 831 (874)
++..+++...+.+.+.++. +|...|.+++|+|++.+|||||.|++|+|||+++. .++..+. |...|
T Consensus 163 d~~i~~wd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~--------~~~~~~~~h~~~v 229 (340)
T 1got_B 163 DTTCALWDIETGQQTTTFT-----GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG--------MCRQTFTGHESDI 229 (340)
T ss_dssp TSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------SEEEEECCCSSCE
T ss_pred CCcEEEEECCCCcEEEEEc-----CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC--------eeEEEEcCCcCCE
Confidence 3445555555666666654 46889999999999999999999999999999875 2333444 56789
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 832 SCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 832 ~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
.+|+|+| ++++||||+.||+|+|||+.+++.
T Consensus 230 ~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 230 NAICFFP-NGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp EEEEECT-TSSEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEEcC-CCCEEEEEcCCCcEEEEECCCCcE
Confidence 9999999 578999999999999999987654
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.18 E-value=8.7e-11 Score=125.27 Aligned_cols=95 Identities=15% Similarity=0.179 Sum_probs=75.8
Q ss_pred ccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeE
Q 002843 755 LCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSC 833 (874)
Q Consensus 755 l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~ 833 (874)
..+++.....+...++. +|...|.+|+|+||+++|||||.|++|+|||+.+. .++..+. |...|.+
T Consensus 46 ~i~iw~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~--------~~~~~~~~~~~~v~~ 112 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTIS-----GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--------KCLKTLKGHSNYVFC 112 (312)
T ss_dssp CEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEE
T ss_pred eEEEEeCCCcccchhhc-----cCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC--------cEEEEEcCCCCCEEE
Confidence 34455544555555554 45889999999999999999999999999999875 2334444 5678999
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 834 VCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 834 l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
++|+| +.++||||+.||+|++||+.+++.
T Consensus 113 ~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~ 141 (312)
T 4ery_A 113 CNFNP-QSNLIVSGSFDESVRIWDVKTGKC 141 (312)
T ss_dssp EEECS-SSSEEEEEETTSCEEEEETTTCCE
T ss_pred EEEcC-CCCEEEEEeCCCcEEEEECCCCEE
Confidence 99999 578999999999999999987644
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.18 E-value=7.1e-11 Score=139.60 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=76.5
Q ss_pred ccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEE
Q 002843 755 LCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCV 834 (874)
Q Consensus 755 l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l 834 (874)
..+++....++.+.+|. +|.+.|.+|+|+|||++|||||.|++|+|||+.++.....-....+....|.+.|.+|
T Consensus 171 ~v~lwd~~~~~~~~~l~-----~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v 245 (611)
T 1nr0_A 171 TVAIFEGPPFKFKSTFG-----EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGL 245 (611)
T ss_dssp CEEEEETTTBEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEE
T ss_pred eEEEEECCCCeEeeeec-----cccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEE
Confidence 34555555566666664 4689999999999999999999999999999987521000000001111467789999
Q ss_pred EEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 835 CWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 835 ~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
+|+| ++.+||||+.|++|+|||+.+++.
T Consensus 246 ~~sp-dg~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 246 TWSP-DGTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp EECT-TSSEEEEEETTSEEEEEETTTTEE
T ss_pred EECC-CCCEEEEEeCCCeEEEEeCCCCce
Confidence 9999 588999999999999999997654
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.17 E-value=7.9e-11 Score=125.80 Aligned_cols=80 Identities=14% Similarity=0.106 Sum_probs=65.3
Q ss_pred CCCCCCeeEEEECCC--CCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCC-CCEEEEeeCCC
Q 002843 776 NNSANVICSISFDRD--EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYI-KNYLASADYDG 851 (874)
Q Consensus 776 ~~~~~~V~si~F~~d--~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~-~~~laS~~~Dg 851 (874)
.+|.+.|.+|+|+|+ |.+|||||.|++|+|||+.+... .++..+. |...|.+|+|+|.. +.+||+|+.||
T Consensus 50 ~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence 456999999999874 89999999999999999986510 1223333 56789999999953 67999999999
Q ss_pred cEEEEeCCCc
Q 002843 852 VVKVCMSCRL 861 (874)
Q Consensus 852 ~V~~WD~~~~ 861 (874)
+|++||+.+.
T Consensus 124 ~v~~wd~~~~ 133 (297)
T 2pm7_B 124 KVSVVEFKEN 133 (297)
T ss_dssp EEEEEEBCSS
T ss_pred cEEEEEecCC
Confidence 9999999864
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.1e-10 Score=129.47 Aligned_cols=103 Identities=12% Similarity=0.121 Sum_probs=77.8
Q ss_pred hccceeeeeceeEeEEec-cc-CCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeee--ecCCC
Q 002843 754 GLCKYARYSKFEVQGMLR-TG-EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE--MSNRS 829 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~-~~-~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~--~~~~~ 829 (874)
+.++++...+.+.+..+. +. ...++...|.+++|+|+|++||+|+.|++|+|||+.+... ...+.. ..|.+
T Consensus 271 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~-----~~~~~~~~~~h~~ 345 (380)
T 3iz6_a 271 GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEM-----VLNLGTLQNSHEG 345 (380)
T ss_dssp SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCE-----EEEECCSCSSCCC
T ss_pred CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCce-----EEEEecccCCCCC
Confidence 445666666677777776 22 2334566799999999999999999999999999886510 001101 13567
Q ss_pred ceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 830 KLSCVCWNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 830 ~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
.|+||+|+| ++.+||||+.||+|+|||+...+
T Consensus 346 ~v~~l~~s~-dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 346 RISCLGLSS-DGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CCCEEEECS-SSSEEEEECTTSCEEEEECCSSS
T ss_pred ceEEEEECC-CCCEEEEeeCCCCEEEEecCCCc
Confidence 899999999 58899999999999999998654
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.16 E-value=9.2e-11 Score=127.76 Aligned_cols=77 Identities=8% Similarity=0.174 Sum_probs=66.7
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCCCEEEEeeCCCcE
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIKNYLASADYDGVV 853 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~Dg~V 853 (874)
+.+|...|.+|+|+|++.+|||||.|++|+|||++++ .++..+ .|.+.|.+|+|+| ++.+||||+.||+|
T Consensus 72 l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~--------~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i 142 (343)
T 2xzm_R 72 LTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTG--------TTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREI 142 (343)
T ss_dssp ECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSS--------CEEEEEECCCSCEEEEEECS-STTEEEEEETTSCE
T ss_pred hccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--------cEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEE
Confidence 3467999999999999999999999999999999976 233344 3667899999999 57899999999999
Q ss_pred EEEeCCC
Q 002843 854 KVCMSCR 860 (874)
Q Consensus 854 ~~WD~~~ 860 (874)
+|||+..
T Consensus 143 ~~wd~~~ 149 (343)
T 2xzm_R 143 KLWNILG 149 (343)
T ss_dssp EEEESSS
T ss_pred EEEeccC
Confidence 9999974
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.15 E-value=7.5e-11 Score=124.62 Aligned_cols=83 Identities=18% Similarity=0.282 Sum_probs=68.5
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCC-CCCEEEEeeCCCc
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNY-IKNYLASADYDGV 852 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~-~~~~laS~~~Dg~ 852 (874)
+.+|.+.|.+|+|+|||++||||+.|++|+|||+.+.... ...+..+ .|...|.+|+|+|. ++.+||+|+.||+
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN----WELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC----EEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc----ceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 4578999999999999999999999999999999865211 1123333 36678999999995 4789999999999
Q ss_pred EEEEeCCCc
Q 002843 853 VKVCMSCRL 861 (874)
Q Consensus 853 V~~WD~~~~ 861 (874)
|+|||+.++
T Consensus 83 v~vwd~~~~ 91 (351)
T 3f3f_A 83 VKLWEEDPD 91 (351)
T ss_dssp EEEEEECTT
T ss_pred EEEEecCCC
Confidence 999999875
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.15 E-value=1.3e-10 Score=137.39 Aligned_cols=108 Identities=14% Similarity=0.106 Sum_probs=78.9
Q ss_pred ccceeeeeceeEeEEeccc--CCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCC-Ccccc------------
Q 002843 755 LCKYARYSKFEVQGMLRTG--EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFND-SVDVY------------ 819 (874)
Q Consensus 755 l~~~~ry~~~~~~~~l~~~--~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~-~~~~~------------ 819 (874)
..+++...+.+.+.++... ...+|.+.|.+|+|+|||++|||||.|++|||||+.+.... ....+
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW 292 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE
T ss_pred cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE
Confidence 3455555555666666321 22368999999999999999999999999999999875210 00000
Q ss_pred ----------------------cCeeee-cCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 820 ----------------------YPAVEM-SNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 820 ----------------------~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
.+...+ .|...|.+|+|+| ++.+||||+.||+|++||+.+++.
T Consensus 293 ~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 293 TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCE
T ss_pred cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCce
Confidence 012223 3567899999999 588999999999999999987644
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.15 E-value=4.1e-11 Score=132.82 Aligned_cols=103 Identities=10% Similarity=0.057 Sum_probs=79.9
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCe-eee-cCCCce
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPA-VEM-SNRSKL 831 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~-~~~-~~~~~v 831 (874)
+..+.|...+.+...+++ .|..+|.+++|+|||++|||||.|++|+|||+.+..... ...++ ..+ .|.+.|
T Consensus 88 ~~v~iWd~~~~~~~~~~~-----~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~--~~~~~~~~~~gh~~~v 160 (380)
T 3iz6_a 88 GRLIVWNALTSQKTHAIK-----LHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRD--GNMPVSRVLTGHKGYA 160 (380)
T ss_dssp SEEEEEETTTTEEEEEEE-----CCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCC--CSSTTCCBCCCCSSCC
T ss_pred CeEEEEECCCCccceEEe-----cCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcccc--CCccceeeccCCCcce
Confidence 345666666677777776 248899999999999999999999999999998642111 11222 223 356789
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 832 SCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 832 ~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
.+++|+|.....|+||+.|++|++||+.+++.
T Consensus 161 ~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~ 192 (380)
T 3iz6_a 161 SSCQYVPDQETRLITGSGDQTCVLWDVTTGQR 192 (380)
T ss_dssp CCCBCCSSSSSCEEEECTTSCEEEECTTTCCE
T ss_pred EEEEEecCCCCEEEEECCCCcEEEEEcCCCcE
Confidence 99999998778899999999999999998755
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.13 E-value=1.7e-10 Score=128.48 Aligned_cols=118 Identities=12% Similarity=0.082 Sum_probs=81.5
Q ss_pred ccceeeeeceeEeEEecc--cCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCC-----cccccCeeeecC
Q 002843 755 LCKYARYSKFEVQGMLRT--GEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDS-----VDVYYPAVEMSN 827 (874)
Q Consensus 755 l~~~~ry~~~~~~~~l~~--~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~-----~~~~~p~~~~~~ 827 (874)
..+++...+.+.+..+.. ....+|...|.+|+|+|||++|||||.|++|+|||+++..... ....+......|
T Consensus 230 ~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h 309 (393)
T 1erj_A 230 AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGH 309 (393)
T ss_dssp CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECC
T ss_pred cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecc
Confidence 345555555556666642 2346789999999999999999999999999999998642110 001111222346
Q ss_pred CCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeeee
Q 002843 828 RSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 828 ~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
...|.+++|+| +..+||||+.||+|+|||+.+++. +.+|...|.+
T Consensus 310 ~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~ 357 (393)
T 1erj_A 310 KDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVIS 357 (393)
T ss_dssp SSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred cCcEEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEE
Confidence 67899999999 477999999999999999998754 5667666654
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.12 E-value=2e-10 Score=126.49 Aligned_cols=110 Identities=12% Similarity=0.072 Sum_probs=83.0
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCC-EEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~-~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~ 832 (874)
+..+++...+.+++.+++ +|.+.|.+|+|+|+++ +|||||.|++|+|||+++..... .+....+...|.
T Consensus 161 g~v~iwd~~~~~~~~~~~-----~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~-----~~~~~~~~~~v~ 230 (357)
T 4g56_B 161 FSVKVWDLSQKAVLKSYN-----AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT-----RIDFCASDTIPT 230 (357)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC-----BCCCTTCCSCEE
T ss_pred CeEEEEECCCCcEEEEEc-----CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee-----eeeecccccccc
Confidence 345666667777777775 3589999999999997 69999999999999998762100 011112446799
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeeee
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
+|+|+|....+||+|+.|++|+|||+.+++. +..+..-|++
T Consensus 231 ~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 274 (357)
T 4g56_B 231 SVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITG 274 (357)
T ss_dssp EEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEE
T ss_pred chhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEE
Confidence 9999998788999999999999999997644 5555555543
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.7e-10 Score=125.22 Aligned_cols=106 Identities=13% Similarity=0.021 Sum_probs=79.0
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecC---CCc
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSN---RSK 830 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~---~~~ 830 (874)
+..+++...+.+.+.++ .+|.+.|.+|+|+|+|.+|||||.|++|+|||+++.. ++..+.. ...
T Consensus 220 g~v~~wd~~~~~~~~~~-----~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~--------~~~~~~~~~~~~~ 286 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAF-----ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR--------EVAIYSKESIIFG 286 (354)
T ss_dssp SCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEEEECCTTCCSC
T ss_pred CeEEEEECCCCcEEEEe-----cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--------EEEEEcCCCcccc
Confidence 33444444445555444 3468999999999999999999999999999998751 1222221 236
Q ss_pred eeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeeee
Q 002843 831 LSCVCWNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 831 v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
+++++|+| ++.+||+|+.||+|+|||+.+++. +..|...|.+
T Consensus 287 ~~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~ 331 (354)
T 2pbi_B 287 ASSVDFSL-SGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVST 331 (354)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEE
T ss_pred eeEEEEeC-CCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEE
Confidence 89999999 588999999999999999987643 5566666654
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.11 E-value=2.8e-10 Score=126.20 Aligned_cols=89 Identities=15% Similarity=0.191 Sum_probs=72.8
Q ss_pred CCCCCCCCeeEEEECC-CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCC
Q 002843 774 EFNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~-d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
.+.+|.+.|.+|+|+| ++.+||||+.|++|+|||+.+.... .....++..+. |...|.+|+|+|..+++||||+.||
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV-LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS-SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc-cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 4567899999999999 9999999999999999999975211 11113455554 6678999999997668999999999
Q ss_pred cEEEEeCCCccc
Q 002843 852 VVKVCMSCRLST 863 (874)
Q Consensus 852 ~V~~WD~~~~~~ 863 (874)
+|+|||+.+++.
T Consensus 155 ~i~iwd~~~~~~ 166 (402)
T 2aq5_A 155 VILVWDVGTGAA 166 (402)
T ss_dssp CEEEEETTTTEE
T ss_pred EEEEEECCCCCc
Confidence 999999998754
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.7e-10 Score=124.47 Aligned_cols=79 Identities=15% Similarity=0.208 Sum_probs=64.8
Q ss_pred CCCCCeeEEEECC--CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCC-CCEEEEeeCCCc
Q 002843 777 NSANVICSISFDR--DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYI-KNYLASADYDGV 852 (874)
Q Consensus 777 ~~~~~V~si~F~~--d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~-~~~laS~~~Dg~ 852 (874)
+|.+.|.+|+|+| +|.+|||||.|++|+|||+++... .++..+. |.+.|.+|+|+|.. +.+||||+.||+
T Consensus 55 gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~ 128 (316)
T 3bg1_A 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA 128 (316)
T ss_dssp CCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC
T ss_pred CCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC
Confidence 5699999999986 489999999999999999986410 1233343 56789999999963 679999999999
Q ss_pred EEEEeCCCc
Q 002843 853 VKVCMSCRL 861 (874)
Q Consensus 853 V~~WD~~~~ 861 (874)
|+|||+...
T Consensus 129 i~lwd~~~~ 137 (316)
T 3bg1_A 129 ISLLTYTGE 137 (316)
T ss_dssp EEEEEECSS
T ss_pred EEEEecCCC
Confidence 999999864
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.6e-10 Score=122.36 Aligned_cols=79 Identities=5% Similarity=0.062 Sum_probs=68.7
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
.+|.+.|.+|+|+|||++||||+.|++|+|||+.+. .++..+. |...|.+++|+| ++++||+++.||+|+
T Consensus 29 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 29 TGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG--------ERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIK 99 (369)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC--------CEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEE
T ss_pred EEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc--------hhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEE
Confidence 356999999999999999999999999999999876 3344454 567899999999 588999999999999
Q ss_pred EEeCCCccc
Q 002843 855 VCMSCRLST 863 (874)
Q Consensus 855 ~WD~~~~~~ 863 (874)
+||+.+++.
T Consensus 100 iwd~~~~~~ 108 (369)
T 3zwl_B 100 LWDVSNGQC 108 (369)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCcE
Confidence 999997654
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.09 E-value=3.9e-10 Score=124.59 Aligned_cols=96 Identities=13% Similarity=0.109 Sum_probs=76.5
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~ 832 (874)
+..+++.....+.+..+ .+|...|.+|+|+||+.+|||||.|++|+|||+.+. .++..+. |...|.
T Consensus 119 g~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~--------~~~~~~~~h~~~v~ 185 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREID-----QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG--------SNPRTLIGHRATVT 185 (420)
T ss_dssp SCEEEECTTSCEEEEET-----TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CCCEEEECCSSCEE
T ss_pred CCEEEEeCCCcceeeec-----ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC--------cCceEEcCCCCcEE
Confidence 34455555555555444 356899999999999999999999999999999876 2333444 667899
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
+++|+| +..+||+|+.||+|++||+.+++.
T Consensus 186 ~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 186 DIAIID-RGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp EEEEET-TTTEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEcC-CCCEEEEEcCCCcEEEeECCCCce
Confidence 999999 588999999999999999997754
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=3.2e-10 Score=121.62 Aligned_cols=82 Identities=13% Similarity=0.171 Sum_probs=67.8
Q ss_pred CCCCCCCeeEEEECCC---CCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCCCEEEEeeCC
Q 002843 775 FNNSANVICSISFDRD---EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIKNYLASADYD 850 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d---~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~D 850 (874)
+.+|.+.|.+|+|+|+ |.+||||+.|++|+|||+.+.. ......+ .|...|.+|+|+| ++.+||+|+.|
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~------~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d 107 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG------QTIPKAQQMHTGPVLDVCWSD-DGSKVFTASCD 107 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS------CEEEEEEEECSSCEEEEEECT-TSSEEEEEETT
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC------ceeEEEeccccCCEEEEEECc-CCCEEEEEcCC
Confidence 3457999999999999 6999999999999999998731 1111233 4678899999999 58899999999
Q ss_pred CcEEEEeCCCccc
Q 002843 851 GVVKVCMSCRLST 863 (874)
Q Consensus 851 g~V~~WD~~~~~~ 863 (874)
|+|+|||+.+++.
T Consensus 108 g~v~iwd~~~~~~ 120 (368)
T 3mmy_A 108 KTAKMWDLSSNQA 120 (368)
T ss_dssp SEEEEEETTTTEE
T ss_pred CcEEEEEcCCCCc
Confidence 9999999998754
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.9e-10 Score=125.44 Aligned_cols=97 Identities=7% Similarity=0.146 Sum_probs=67.9
Q ss_pred ccceeeeece--eEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCce
Q 002843 755 LCKYARYSKF--EVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKL 831 (874)
Q Consensus 755 l~~~~ry~~~--~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v 831 (874)
..+++..... +.+.++ .+|.+.|.+|+|+|||++|||||.|++|+|||+.+.. ...+...+ .|...|
T Consensus 34 ~i~iw~~~~~~~~~~~~~-----~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~-----~~~~~~~~~~~~~~v 103 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTF-----SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG-----TWKQTLVLLRLNRAA 103 (377)
T ss_dssp CBCEEEEETTEEEECCCB-----CCCSSCEEEEEECTTTCCEEEEETTSSEEEC-----------CCCCEEECCCCSSCE
T ss_pred EEEEEEccCCceEEEEEE-----ecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC-----ceeeeeEecccCCce
Confidence 3445555444 344333 4579999999999999999999999999999999752 01233333 466789
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 832 SCVCWNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 832 ~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
.+++|+| ++.+||+|+.||+|++||+.+++
T Consensus 104 ~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 104 TFVRWSP-NEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp EEEECCT-TSSCCEEEESSSCEEECCC----
T ss_pred EEEEECC-CCCEEEEEecCCeEEEEEECCcc
Confidence 9999999 58899999999999999998764
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.2e-10 Score=124.60 Aligned_cols=89 Identities=11% Similarity=0.067 Sum_probs=73.9
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCC-CCCEEEEeeCCCcEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNY-IKNYLASADYDGVVK 854 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~-~~~~laS~~~Dg~V~ 854 (874)
+|.+.|.+++|+|++.+|||||.|++|+|||+.+. .++..+. |...|.|++|+|. .+++||||+.||+|+
T Consensus 152 ~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~--------~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~ 223 (354)
T 2pbi_B 152 MHTNYLSACSFTNSDMQILTASGDGTCALWDVESG--------QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAM 223 (354)
T ss_dssp ECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEE
T ss_pred ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC--------eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEE
Confidence 46899999999999999999999999999999876 3344454 5578999999985 357999999999999
Q ss_pred EEeCCCccc---eeeeeeeeee
Q 002843 855 VCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 855 ~WD~~~~~~---~~~~~~f~~~ 873 (874)
+||+.+++. +..|...|++
T Consensus 224 ~wd~~~~~~~~~~~~h~~~v~~ 245 (354)
T 2pbi_B 224 VWDMRSGQCVQAFETHESDVNS 245 (354)
T ss_dssp EEETTTCCEEEEECCCSSCEEE
T ss_pred EEECCCCcEEEEecCCCCCeEE
Confidence 999998754 5566666654
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.07 E-value=3.8e-10 Score=121.19 Aligned_cols=101 Identities=11% Similarity=0.030 Sum_probs=81.0
Q ss_pred ccceeeeeceeEeEEecccCCCCCCCCeeEEEECCC----CCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCC
Q 002843 755 LCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRD----EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRS 829 (874)
Q Consensus 755 l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d----~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~ 829 (874)
-.+++.+.+.+.+..++.-....|...|.+++|+|+ |.+||+|+.|++|+|||+.+. .++..+. |..
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--------~~~~~~~~~~~ 116 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM--------QCIKHYVGHGN 116 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC--------CEEEEEESCCS
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc--------eEeeeecCCCC
Confidence 456667766667777762222346789999999999 679999999999999999875 2344454 667
Q ss_pred ceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 830 KLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 830 ~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
.|.+++|+|.++++||+|+.||+|+|||+.+++.
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 150 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL 150 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE
Confidence 8999999997788999999999999999997654
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.1e-10 Score=125.43 Aligned_cols=104 Identities=9% Similarity=0.046 Sum_probs=60.6
Q ss_pred hhccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEE------------EEecCCCcEEEeeCCCCCCC-C----
Q 002843 753 DGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHF------------AAAGVSKKIKIFEFNALFND-S---- 815 (874)
Q Consensus 753 ~~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~l------------AT~g~dk~Ikiwd~~~~~~~-~---- 815 (874)
++.+|.+...+.+.+.+|..++ ++...|++++|+|||.+| |||+.|++||+||+.++..- .
T Consensus 202 D~TIkIWDl~TGk~l~tL~g~~--~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~ 279 (356)
T 2w18_A 202 MNNIVIWNLKTGQLLKKMHIDD--SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYC 279 (356)
T ss_dssp TSEEEEEETTTCCEEEEEECCC-----CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEEC
T ss_pred CCcEEEEECCCCcEEEEEcCCC--cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEee
Confidence 3566777777777777776211 123467777777777654 44555555555555543100 0
Q ss_pred -cccc-------------------------------cCeeeec-CCCc-eeEEEEeCCCCCEEEEeeCCCcEEEEeCC
Q 002843 816 -VDVY-------------------------------YPAVEMS-NRSK-LSCVCWNNYIKNYLASADYDGVVKVCMSC 859 (874)
Q Consensus 816 -~~~~-------------------------------~p~~~~~-~~~~-v~~l~wnp~~~~~laS~~~Dg~V~~WD~~ 859 (874)
.++| ..+.++. |... +++|+|+| ++.+||||+.|++|+|||+.
T Consensus 280 ~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSP-DG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 280 LPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSG-TDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp CCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECS-SSSEEEEECTTSCEEEEEEC
T ss_pred ccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECC-CCCEEEEEECCCcEEEecCC
Confidence 0000 2334454 3344 45799999 58899999999999999963
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.04 E-value=2.5e-10 Score=123.23 Aligned_cols=81 Identities=23% Similarity=0.256 Sum_probs=67.1
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCC-CCCEEEEeeCCCcE
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNY-IKNYLASADYDGVV 853 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~-~~~~laS~~~Dg~V 853 (874)
.+|.+.|.+|+|+|||.+||||+.|++|+|||+.... ..++..+. |...|.+|+|+|. ++++||||+.||+|
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp EECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc------ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 3569999999999999999999999999999997431 12333444 5678999999874 37899999999999
Q ss_pred EEEeCCCcc
Q 002843 854 KVCMSCRLS 862 (874)
Q Consensus 854 ~~WD~~~~~ 862 (874)
+|||+.+++
T Consensus 82 ~iwd~~~~~ 90 (379)
T 3jrp_A 82 LIWKEENGR 90 (379)
T ss_dssp EEEEEETTE
T ss_pred EEEEcCCCc
Confidence 999998764
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.03 E-value=3.3e-10 Score=135.54 Aligned_cols=78 Identities=9% Similarity=0.170 Sum_probs=66.9
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCCCEEEEeeCCCcE
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIKNYLASADYDGVV 853 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~Dg~V 853 (874)
+.+|.+.|.+|+|+|||++|||||.|++|+|||+.+. ..+..+ .|...|.||+|+| +..+||||+.||+|
T Consensus 426 ~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~--------~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i 496 (694)
T 3dm0_A 426 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAG--------VSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTI 496 (694)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCC--------cceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEE
Confidence 3467999999999999999999999999999999876 223333 4667899999999 57899999999999
Q ss_pred EEEeCCCc
Q 002843 854 KVCMSCRL 861 (874)
Q Consensus 854 ~~WD~~~~ 861 (874)
+|||+...
T Consensus 497 ~iwd~~~~ 504 (694)
T 3dm0_A 497 KLWNTLGE 504 (694)
T ss_dssp EEECTTSC
T ss_pred EEEECCCC
Confidence 99998654
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.2e-09 Score=118.62 Aligned_cols=97 Identities=10% Similarity=0.050 Sum_probs=73.0
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec--CCCce
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS--NRSKL 831 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~--~~~~v 831 (874)
+..+++...+.+.+..... ++...|.+++|+|||.+||||+.|++|+|||+++.. .....+. |.+.|
T Consensus 149 g~i~~wd~~~~~~~~~~~~----~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~-------~~~~~~~~~h~~~v 217 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSA----KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD-------QASSRFPVDEEAKI 217 (343)
T ss_dssp CCEEEEESSSSCEEEEECC----CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT-------SCCEECCCCTTSCE
T ss_pred CcEEEEECCCCcEEEEEec----CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC-------CCccEEeccCCCCE
Confidence 4455555555555444321 235679999999999999999999999999999862 1112222 56889
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 832 SCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 832 ~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
.+|+|+| ++.+|||++ |++|+|||+.+.+.
T Consensus 218 ~~l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~ 247 (343)
T 3lrv_A 218 KEVKFAD-NGYWMVVEC-DQTVVCFDLRKDVG 247 (343)
T ss_dssp EEEEECT-TSSEEEEEE-SSBEEEEETTSSTT
T ss_pred EEEEEeC-CCCEEEEEe-CCeEEEEEcCCCCc
Confidence 9999999 588999999 55999999997644
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.01 E-value=6e-10 Score=125.52 Aligned_cols=112 Identities=11% Similarity=0.074 Sum_probs=78.9
Q ss_pred hhccceeeeeceeEeEEecccCCCCCCCCeeEEEECC-CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCce
Q 002843 753 DGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKL 831 (874)
Q Consensus 753 ~~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~-d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v 831 (874)
++..++|.+........++ +.+|.+.|.+|+|+| |+.+|||||.|++|+|||+++........+ -.+...+
T Consensus 141 dg~i~lWd~~~~~~~~~~~---~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-----~~~~~~~ 212 (435)
T 4e54_B 141 GGDIMLWNFGIKDKPTFIK---GIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASS-----DTINIWF 212 (435)
T ss_dssp TSCEEEECSSCCSCCEEEC---CCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECC-----SSCSCCC
T ss_pred CCEEEEEECCCCCceeEEE---ccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEecc-----CCCCccE
Confidence 3556666665444333332 346899999999998 688999999999999999986421110000 0122357
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEeCCCcc--ceeeeeeeeee
Q 002843 832 SCVCWNNYIKNYLASADYDGVVKVCMSCRLS--TYCFRKKFVFT 873 (874)
Q Consensus 832 ~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~--~~~~~~~f~~~ 873 (874)
.+++|+| ++.+||+|+.||+|++||+.... .+..|..-|++
T Consensus 213 ~~~~~~~-~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~ 255 (435)
T 4e54_B 213 CSLDVSA-SSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTH 255 (435)
T ss_dssp CCEEEET-TTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEE
T ss_pred EEEEECC-CCCEEEEEeCCCcEeeeccCcceeEEEecccceEEe
Confidence 8999999 58899999999999999997542 26666666654
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.00 E-value=7.9e-10 Score=116.71 Aligned_cols=87 Identities=21% Similarity=0.229 Sum_probs=67.8
Q ss_pred CCCCCCeeEEEECCCC----CEEEEecCCCcEEEeeCCCCCCCCc-----------------------------------
Q 002843 776 NNSANVICSISFDRDE----DHFAAAGVSKKIKIFEFNALFNDSV----------------------------------- 816 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~----~~lAT~g~dk~Ikiwd~~~~~~~~~----------------------------------- 816 (874)
.+|...|.+|+|+|++ .+|||||.|++|+|||+++......
T Consensus 211 ~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
T 3f3f_A 211 PGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAEL 290 (351)
T ss_dssp CCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------
T ss_pred CCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeee
Confidence 3468999999999999 8999999999999999986411000
Q ss_pred ---ccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 817 ---DVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 817 ---~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
....++..+. |...|.+|+|+| ++.+||||+.||+|+|||+.+++.
T Consensus 291 ~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 291 QSNLQVELLSEHDDHNGEVWSVSWNL-TGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp CCSEEEEEEEEECTTSSCEEEEEECS-SSCCEEEEETTSCEEEEEECTTSC
T ss_pred cccccccEEEEEecccccEEEEEEcC-CCCEEEEecCCCcEEEEecCcCcc
Confidence 0002333344 557899999999 578999999999999999998754
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.1e-09 Score=119.56 Aligned_cols=88 Identities=15% Similarity=0.220 Sum_probs=68.8
Q ss_pred CCCCCCeeEEEECC-CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee------cCCCceeEEEEeCCCCCEEEEee
Q 002843 776 NNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM------SNRSKLSCVCWNNYIKNYLASAD 848 (874)
Q Consensus 776 ~~~~~~V~si~F~~-d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~------~~~~~v~~l~wnp~~~~~laS~~ 848 (874)
.+|.+.|.+|+|+| +|++||||+.|++|+|||+.+..........+...+ .|...|.+++|+|.+..+||+++
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 34699999999999 999999999999999999997632111000000000 25678999999998788999999
Q ss_pred CCCcEEEEeCCCccc
Q 002843 849 YDGVVKVCMSCRLST 863 (874)
Q Consensus 849 ~Dg~V~~WD~~~~~~ 863 (874)
.||+|++||+.+++.
T Consensus 120 ~d~~i~iwd~~~~~~ 134 (408)
T 4a11_B 120 FDKTLKVWDTNTLQT 134 (408)
T ss_dssp TTSEEEEEETTTTEE
T ss_pred CCCeEEEeeCCCCcc
Confidence 999999999997644
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.3e-09 Score=116.96 Aligned_cols=96 Identities=9% Similarity=0.152 Sum_probs=78.5
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECC-CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee----cCC
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM----SNR 828 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~-d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~----~~~ 828 (874)
+..+++...+.+++.+++ +|...|.+|+|+| ++.+||||+.|++|+|||+.+. .++..+ .+.
T Consensus 95 g~i~v~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~ 161 (366)
T 3k26_A 95 GIIRIINPITMQCIKHYV-----GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD--------TLVAIFGGVEGHR 161 (366)
T ss_dssp CEEEEECTTTCCEEEEEE-----SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT--------EEEEEECSTTSCS
T ss_pred CEEEEEEchhceEeeeec-----CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC--------eEEEEeccccccc
Confidence 455666666677777765 3589999999999 9999999999999999999875 233333 356
Q ss_pred CceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 829 SKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 829 ~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
..|.+++|+| ++.+|++++.||+|++||+.+++.
T Consensus 162 ~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~ 195 (366)
T 3k26_A 162 DEVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRM 195 (366)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEESCSHHH
T ss_pred CceeEEEECC-CCCEEEEecCCCCEEEEECCCCcc
Confidence 7899999999 588999999999999999997643
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.00 E-value=1e-09 Score=119.30 Aligned_cols=88 Identities=15% Similarity=0.060 Sum_probs=69.2
Q ss_pred CCCCCeeEEEECC--CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee--cCCCceeEEEEeCCCCCEEEEeeCCCc
Q 002843 777 NSANVICSISFDR--DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM--SNRSKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 777 ~~~~~V~si~F~~--d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~--~~~~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
+|...|.+++|+| ++++|||||.|++|+|||+++.. ++... .+...|.|++|+| ++.+||+|+.||+
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~--------~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg~ 193 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS--------QYIVHSAKSDVEYSSGVLHK-DSLLLALYSPDGI 193 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC--------EEEEECCCSSCCCCEEEECT-TSCEEEEECTTSC
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc--------EEEEEecCCCCceEEEEECC-CCCEEEEEcCCCE
Confidence 4578999999999 99999999999999999999762 22222 2345799999999 5889999999999
Q ss_pred EEEEeCCCccc----eee-eeeeeee
Q 002843 853 VKVCMSCRLST----YCF-RKKFVFT 873 (874)
Q Consensus 853 V~~WD~~~~~~----~~~-~~~f~~~ 873 (874)
|+|||+.+++. +.. |..-|.+
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~v~~ 219 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEEAKIKE 219 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTTSCEEE
T ss_pred EEEEECCCCCCCccEEeccCCCCEEE
Confidence 99999997643 444 4555543
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.4e-09 Score=114.74 Aligned_cols=91 Identities=12% Similarity=0.181 Sum_probs=70.6
Q ss_pred cceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEe--cCCCcEEEeeCCCCCCCCcccccCeeeec-CCCcee
Q 002843 756 CKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAA--GVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLS 832 (874)
Q Consensus 756 ~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~--g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~ 832 (874)
.+++............+ ...|.++.|+|++.++++| +.|++|+|||+.++ .++.++. |.+.|.
T Consensus 223 i~lwd~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~--------~~~~~l~gH~~~V~ 288 (318)
T 4ggc_A 223 IRIWNVCSGACLSAVDA------HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM--------AKVAELKGHTSRVL 288 (318)
T ss_dssp EEEEETTTCCEEEEEEC------SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC--------CEEEEECCCSSCEE
T ss_pred EEEEecccccccccccc------eeeeeeeeecccccceEEEEEcCCCEEEEEECCCC--------cEEEEEcCCCCCEE
Confidence 34444444444444433 6789999999999986654 48999999999986 4555665 568899
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCc
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~ 861 (874)
+|+|+| ++.+||||+.||+|+|||+...
T Consensus 289 ~l~~sp-dg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 289 SLTMSP-DGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEECT-TSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEcC-CCCEEEEEecCCeEEEEECCCC
Confidence 999999 5789999999999999999753
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=131.03 Aligned_cols=109 Identities=19% Similarity=0.222 Sum_probs=81.3
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeee--ecCCCce
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE--MSNRSKL 831 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~--~~~~~~v 831 (874)
+..+++...+.+.+.++. +|...|.+|+|+||+.+|||||.|++|+|||...... ..+.. ..|...|
T Consensus 452 g~v~vwd~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~------~~~~~~~~~h~~~v 520 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFV-----GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK------YTISEGGEGHRDWV 520 (694)
T ss_dssp SEEEEEETTTTEEEEEEE-----CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE------EEECSSTTSCSSCE
T ss_pred CcEEEEECCCCcceeEEe-----CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc------eeeccCCCCCCCcE
Confidence 344556555555555554 4689999999999999999999999999999865311 01111 1345679
Q ss_pred eEEEEeCCC-CCEEEEeeCCCcEEEEeCCCccc---eeeeeeeeee
Q 002843 832 SCVCWNNYI-KNYLASADYDGVVKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 832 ~~l~wnp~~-~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
.|++|+|.. ...|+||+.||+|+|||+.+.+. +..|...|.+
T Consensus 521 ~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~ 566 (694)
T 3dm0_A 521 SCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVST 566 (694)
T ss_dssp EEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEE
Confidence 999999964 36899999999999999987643 6677777665
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=98.99 E-value=7.6e-10 Score=118.32 Aligned_cols=91 Identities=8% Similarity=0.068 Sum_probs=72.0
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCC-EEEEeeCCCcEEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKN-YLASADYDGVVKV 855 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~-~laS~~~Dg~V~~ 855 (874)
+|.+.|.+|+|+||+.+||+|+.|++|+|||+.+.... ..+.....+...|.+++|+|. +. +||+|+.||.|++
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN----VDLLQSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEILK 83 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE----EEEEEEEECSSCEEEEEEEES-SSEEEEEEETTSCEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc----ccceeeeecCCceEEEEECCC-CCcEEEEEcCCCeEEE
Confidence 67999999999999999999999999999999875210 012233456788999999994 88 9999999999999
Q ss_pred EeC-CCccc--eee--eeeeee
Q 002843 856 CMS-CRLST--YCF--RKKFVF 872 (874)
Q Consensus 856 WD~-~~~~~--~~~--~~~f~~ 872 (874)
||+ .+++. +.. +..-|.
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~ 105 (342)
T 1yfq_A 84 VDLIGSPSFQALTNNEANLGIC 105 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEE
T ss_pred EEeccCCceEeccccCCCCceE
Confidence 999 76643 444 544443
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.99 E-value=7.5e-10 Score=123.60 Aligned_cols=90 Identities=17% Similarity=0.176 Sum_probs=71.9
Q ss_pred ceeEeEEecccCCCCCCCCeeEEEECC-CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCC
Q 002843 763 KFEVQGMLRTGEFNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIK 841 (874)
Q Consensus 763 ~~~~~~~l~~~~~~~~~~~V~si~F~~-d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~ 841 (874)
+.+.++++.. +|.+.|.+|+|+| ||.+|||||.|++|+|||+.+..... ...+...+.|.+.|.||+|+| +.
T Consensus 51 ~g~~~~~~~~----~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~-~~ 123 (437)
T 3gre_A 51 RGKLIATLME----NEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE--VYSSSLTYDCSSTVTQITMIP-NF 123 (437)
T ss_dssp CCCEEEEECT----TTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC--CCSCSEEEECSSCEEEEEECT-TS
T ss_pred cceEEeeecc----CCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc--ccceeeeccCCCCEEEEEEeC-CC
Confidence 4566777732 4699999999999 99999999999999999988621111 112344456788999999999 58
Q ss_pred CEEEEeeCCCcEEEEeCC
Q 002843 842 NYLASADYDGVVKVCMSC 859 (874)
Q Consensus 842 ~~laS~~~Dg~V~~WD~~ 859 (874)
.+||+|+.||+|+|||+.
T Consensus 124 ~~l~s~s~dg~i~vwd~~ 141 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVN 141 (437)
T ss_dssp SEEEEEETTSEEEEEEEE
T ss_pred CEEEEEeCCCEEEEEEec
Confidence 899999999999999995
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.7e-09 Score=116.00 Aligned_cols=96 Identities=7% Similarity=0.115 Sum_probs=75.0
Q ss_pred hccceeeeec-eeEe-EEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCce
Q 002843 754 GLCKYARYSK-FEVQ-GMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKL 831 (874)
Q Consensus 754 ~l~~~~ry~~-~~~~-~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v 831 (874)
+..+++...+ ...+ ..+. +|...|.+|+|+||+++||||+.|++|+|||+.+. ..+....|...|
T Consensus 64 g~i~iw~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--------~~~~~~~~~~~v 130 (368)
T 3mmy_A 64 NDVRCWEVQDSGQTIPKAQQ-----MHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN--------QAIQIAQHDAPV 130 (368)
T ss_dssp SEEEEEEECTTSCEEEEEEE-----ECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCE
T ss_pred CcEEEEEcCCCCceeEEEec-----cccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC--------CceeeccccCce
Confidence 3445555553 2222 3443 35899999999999999999999999999999976 233345577899
Q ss_pred eEEEE--eCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 832 SCVCW--NNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 832 ~~l~w--np~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
.+++| +| +..+|++|+.||+|++||+.+++.
T Consensus 131 ~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 131 KTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp EEEEEEECS-SCEEEEEEETTSEEEEECSSCSSC
T ss_pred EEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcE
Confidence 99999 77 477999999999999999987644
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=118.63 Aligned_cols=77 Identities=9% Similarity=0.129 Sum_probs=66.2
Q ss_pred CCCCCeeEEEECCCC-CEEEEecCCCcEEEeeCCCCCCCCcccccCeeee---cCCCceeEEEEeCCCCCEEEEeeCCCc
Q 002843 777 NSANVICSISFDRDE-DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM---SNRSKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 777 ~~~~~V~si~F~~d~-~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~---~~~~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
+|...|.+|+|+|+| .+||||+.|++|+|||+.+.. ....+ .|...|.+++|+|.++++||+++.||+
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~ 142 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN--------KTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGA 142 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT--------CEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTE
T ss_pred CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc--------cceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCE
Confidence 458999999999999 899999999999999999752 11222 367889999999977889999999999
Q ss_pred EEEEeCCCc
Q 002843 853 VKVCMSCRL 861 (874)
Q Consensus 853 V~~WD~~~~ 861 (874)
|++||+...
T Consensus 143 i~iwd~~~~ 151 (383)
T 3ei3_B 143 TTLRDFSGS 151 (383)
T ss_dssp EEEEETTSC
T ss_pred EEEEECCCC
Confidence 999999854
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.2e-09 Score=126.29 Aligned_cols=89 Identities=19% Similarity=0.201 Sum_probs=70.7
Q ss_pred ceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEE
Q 002843 757 KYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVC 835 (874)
Q Consensus 757 ~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~ 835 (874)
+.+.. +.+++.+|+ +|...|.+|+|+|||++|||||.|++|+|||+... ++..+. |.+.|.+|+
T Consensus 41 ~iWd~-~~~~~~~l~-----gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~~~---------~~~~~~~~~~~v~~~~ 105 (577)
T 2ymu_A 41 KLWNR-NGQLLQTLT-----GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ---------LLQTLTGHSSSVRGVA 105 (577)
T ss_dssp EEECT-TSCEEEEEE-----CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC---------EEEEECCCSSCEEEEE
T ss_pred EEEEC-CCCEEEEEe-----CCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC---------EEEEEECCCCCEEEEE
Confidence 44442 345566665 46899999999999999999999999999996532 233443 567899999
Q ss_pred EeCCCCCEEEEeeCCCcEEEEeCCCc
Q 002843 836 WNNYIKNYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 836 wnp~~~~~laS~~~Dg~V~~WD~~~~ 861 (874)
|+| ++.+||+++.|+++++||....
T Consensus 106 ~s~-d~~~l~~~~~d~~~~~~~~~~~ 130 (577)
T 2ymu_A 106 FSP-DGQTIASASDDKTVKLWNRNGQ 130 (577)
T ss_dssp ECT-TSSEEEEEETTSCEEEEETTCC
T ss_pred ECC-CCCEEEEEcCCCceeecccccc
Confidence 999 5789999999999999998754
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=98.98 E-value=1.6e-09 Score=121.40 Aligned_cols=93 Identities=12% Similarity=0.180 Sum_probs=76.9
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEec--CCCcEEEeeCCCCCCCCcccccCeeeec-CCCc
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG--VSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSK 830 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g--~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~ 830 (874)
+..+++...+.+.+..+.+ ...|+++.|+|++.+|++|+ .|++|+|||+.++ .++.++. |.+.
T Consensus 301 ~~I~iwd~~t~~~~~~~~~------~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~--------~~v~~l~gH~~~ 366 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVDA------HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM--------AKVAELKGHTSR 366 (420)
T ss_dssp CEEEEEETTTTEEEEEEEC------SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC--------CEEEEECCCSSC
T ss_pred CEEEEEeCCccccceeecc------ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC--------cEEEEEcCCCCC
Confidence 4567777777888887775 46799999999999977654 7999999999986 4566665 5678
Q ss_pred eeEEEEeCCCCCEEEEeeCCCcEEEEeCCCc
Q 002843 831 LSCVCWNNYIKNYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 831 v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~ 861 (874)
|.+|+|+| ++.+||||+.||+|+|||+...
T Consensus 367 V~~l~~sp-dg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 367 VLSLTMSP-DGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEEEECT-TSSCEEEEETTTEEEEECCSCS
T ss_pred EEEEEEcC-CCCEEEEEecCCeEEEEECCCC
Confidence 99999999 5789999999999999999754
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.5e-09 Score=127.05 Aligned_cols=90 Identities=9% Similarity=0.103 Sum_probs=66.2
Q ss_pred CCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCC-CCcccccCeeee-----cCCCceeEEEEeCCCCCEEEEeeCCCc
Q 002843 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFN-DSVDVYYPAVEM-----SNRSKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~-~~~~~~~p~~~~-----~~~~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
+..|.+++|||||++||+||.|++|+|||+.+... .+.- ..+..+ .|.+.|.+|+|+|+ + ||+++.|++
T Consensus 129 ~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~--i~l~ti~~~~~gh~~~V~sVawSPd-g--Laass~D~t 203 (588)
T 2j04_A 129 SRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEF--YFESSIRLSDAGSKDWVTHIVWYED-V--LVAALSNNS 203 (588)
T ss_dssp TTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCC--EEEEEEECSCTTCCCCEEEEEEETT-E--EEEEETTCC
T ss_pred cccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccc--eeeeeeecccccccccEEEEEEcCC-c--EEEEeCCCe
Confidence 34699999999999999999999999999997521 0000 012232 24468999999995 5 888899999
Q ss_pred EEEEeCCCccc------e-eeeeeeeee
Q 002843 853 VKVCMSCRLST------Y-CFRKKFVFT 873 (874)
Q Consensus 853 V~~WD~~~~~~------~-~~~~~f~~~ 873 (874)
|++||+..... + ..|...|.+
T Consensus 204 VrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 204 VFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EEEEECCCCccccceeeecccccCcEEE
Confidence 99999987542 4 355555544
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.4e-09 Score=119.56 Aligned_cols=111 Identities=13% Similarity=0.134 Sum_probs=87.2
Q ss_pred hccceeeeeceeEeEEec-ccCCCCCCCCeeEEEECCCC-CEEEEecCCC---cEEEeeCCCCCCCCcccccCeeeec--
Q 002843 754 GLCKYARYSKFEVQGMLR-TGEFNNSANVICSISFDRDE-DHFAAAGVSK---KIKIFEFNALFNDSVDVYYPAVEMS-- 826 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~-~~~~~~~~~~V~si~F~~d~-~~lAT~g~dk---~Ikiwd~~~~~~~~~~~~~p~~~~~-- 826 (874)
+..+++...+.+.+.++. ++...+|...|.+++|+|++ .+||+|+.|+ +|+|||+++.. .++..+.
T Consensus 188 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-------~~~~~~~~~ 260 (416)
T 2pm9_A 188 NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-------TPLQTLNQG 260 (416)
T ss_dssp SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-------SCSBCCCSC
T ss_pred CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-------CCcEEeecC
Confidence 345666667777888887 55666778999999999998 5899999999 99999999751 2333443
Q ss_pred CCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeee
Q 002843 827 NRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFV 871 (874)
Q Consensus 827 ~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~ 871 (874)
|...|.+++|+|.++.+||+++.||+|+|||+.+++. +..+...|
T Consensus 261 ~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v 308 (416)
T 2pm9_A 261 HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWC 308 (416)
T ss_dssp CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCC
T ss_pred ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCce
Confidence 5678999999997788999999999999999998754 44444443
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.98 E-value=2.4e-09 Score=112.96 Aligned_cols=106 Identities=14% Similarity=0.195 Sum_probs=81.1
Q ss_pred hhccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCC-CCcccc------------
Q 002843 753 DGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFN-DSVDVY------------ 819 (874)
Q Consensus 753 ~~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~-~~~~~~------------ 819 (874)
++-.+.|...+.+++.+++ +.+|...|.+|+|+|+|++|||||.|++|+|||+.+... .....|
T Consensus 44 D~tV~iWd~~tg~~~~~~~---~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~ 120 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSY 120 (318)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETT
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCC
Confidence 3556777777888888776 235789999999999999999999999999999987521 000111
Q ss_pred --------------------cCeeee-cCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 820 --------------------YPAVEM-SNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 820 --------------------~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
..+..+ .|...+.+++|++ .+.+|+|++.||+|+|||+.+++
T Consensus 121 ~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 121 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCBT
T ss_pred EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC-CCCEEEEEecCcceeEEECCCCc
Confidence 122222 3556799999998 57899999999999999998764
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=7.3e-10 Score=123.29 Aligned_cols=87 Identities=13% Similarity=0.167 Sum_probs=65.7
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCC--ccccc-Ceeeec-CC------------CceeEEEEeC
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDS--VDVYY-PAVEMS-NR------------SKLSCVCWNN 838 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~--~~~~~-p~~~~~-~~------------~~v~~l~wnp 838 (874)
...+.+.|.+|+|+|||++|||||.|++|+|||+.+..... ....+ ++..+. |. ..|.+|+|+|
T Consensus 24 ~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 24 DVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred cccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 34568999999999999999999999999999999753110 00111 233343 44 7799999999
Q ss_pred CCC-CEEEEeeCCCcEEEEeCCCc
Q 002843 839 YIK-NYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 839 ~~~-~~laS~~~Dg~V~~WD~~~~ 861 (874)
... .+|++|+.||+|+|||+..+
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~ 127 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISER 127 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEE
T ss_pred CCCcceEEEeCCCCeEEEEecccc
Confidence 632 79999999999999999864
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=98.97 E-value=2.3e-09 Score=120.06 Aligned_cols=95 Identities=14% Similarity=0.247 Sum_probs=77.1
Q ss_pred hhccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCce
Q 002843 753 DGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKL 831 (874)
Q Consensus 753 ~~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v 831 (874)
++-.+.|...+.++...+. +.+|.+.|.||+|+|||.+||||+.|++|+|||+.+. .++..+. |...|
T Consensus 124 d~tV~lWd~~tg~~~~~~~---~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~--------~~~~~~~~h~~~v 192 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--------KRLRNMTSHSARV 192 (420)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC--------cEEEEEeCCCCce
Confidence 3456677777777776665 2357899999999999999999999999999999976 2344444 55789
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEeCCCc
Q 002843 832 SCVCWNNYIKNYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 832 ~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~ 861 (874)
.|++|++ .+|+||+.|++|++||+...
T Consensus 193 ~~~s~~~---~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 193 GSLSWNS---YILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEETTSS
T ss_pred EEEeeCC---CEEEEEeCCCceeEeeeccc
Confidence 9999986 49999999999999999864
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=98.96 E-value=2.3e-09 Score=117.41 Aligned_cols=83 Identities=16% Similarity=0.210 Sum_probs=69.6
Q ss_pred CCCCCeeEEEECCCCC-EEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEE
Q 002843 777 NSANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKV 855 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~-~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~ 855 (874)
+|...|.+|+|+|+++ +||||+.|++|+|||+++... ...++..+.+...|.+++|+|.++.+||+++.||+|+|
T Consensus 202 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~i 277 (383)
T 3ei3_B 202 LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKD----KNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRV 277 (383)
T ss_dssp CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCS----TTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEE
T ss_pred cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCc----ccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEE
Confidence 4689999999999999 899999999999999997421 11344455678899999999956889999999999999
Q ss_pred EeCCCccc
Q 002843 856 CMSCRLST 863 (874)
Q Consensus 856 WD~~~~~~ 863 (874)
||+.+++.
T Consensus 278 wd~~~~~~ 285 (383)
T 3ei3_B 278 YSSYDWSK 285 (383)
T ss_dssp EETTBTTS
T ss_pred EECCCCcc
Confidence 99987643
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.9e-09 Score=126.08 Aligned_cols=96 Identities=9% Similarity=0.077 Sum_probs=73.2
Q ss_pred CCCCCeeEEEECCC------CCEEEEecCCCcEEEeeCCCCCCCC---cccccCeeeec-CCCceeEEEEeCCCCCEEEE
Q 002843 777 NSANVICSISFDRD------EDHFAAAGVSKKIKIFEFNALFNDS---VDVYYPAVEMS-NRSKLSCVCWNNYIKNYLAS 846 (874)
Q Consensus 777 ~~~~~V~si~F~~d------~~~lAT~g~dk~Ikiwd~~~~~~~~---~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS 846 (874)
+|.+.|.+|+|+|+ +.+|||||.|++|+|||+.+..... .....|...+. |...|.||+|+|. .+|||
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~las 282 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TTVVC 282 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SEEEE
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--CeEEE
Confidence 35788999999997 5799999999999999998652110 01223555554 5578999999983 48999
Q ss_pred eeCCCcEEEEeCCCcc----ceeeeeeeeeeC
Q 002843 847 ADYDGVVKVCMSCRLS----TYCFRKKFVFTL 874 (874)
Q Consensus 847 ~~~Dg~V~~WD~~~~~----~~~~~~~f~~~~ 874 (874)
|+.||+|+|||+.++. .+..|...|.+|
T Consensus 283 gs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv 314 (524)
T 2j04_B 283 GFKNGFVAEFDLTDPEVPSFYDQVHDSYILSV 314 (524)
T ss_dssp EETTSEEEEEETTBCSSCSEEEECSSSCEEEE
T ss_pred EeCCCEEEEEECCCCCCceEEeecccccEEEE
Confidence 9999999999998652 256777777653
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.6e-09 Score=134.61 Aligned_cols=89 Identities=9% Similarity=0.046 Sum_probs=68.7
Q ss_pred eeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccc-cCeeee--cCCCceeEEEEe---
Q 002843 764 FEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVY-YPAVEM--SNRSKLSCVCWN--- 837 (874)
Q Consensus 764 ~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~-~p~~~~--~~~~~v~~l~wn--- 837 (874)
+.++++|+ +|.+.|.+|+|+||| +||+|+.|++|+|||+++... ++ ..+..+ .|.+.|.+|+|+
T Consensus 565 ~~~~~~l~-----~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~----~~~~~~~~~~~gh~~~V~sv~Fs~~~ 634 (902)
T 2oaj_A 565 FMPSTAVH-----ANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAI----IYMENIREISGAQSACVTCIEFVIME 634 (902)
T ss_dssp EEEEEEEC-----CCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEE----EEEEEGGGTCSSCCCCEEEEEEEEEE
T ss_pred cceeEEEE-----cCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeE----EEEeehhHhccccccceEEEEEEEEe
Confidence 45666665 358999999999999 999999999999999876410 00 111222 356789999999
Q ss_pred --CCC--CCEEEEeeCCCcEEEEeC---CCcc
Q 002843 838 --NYI--KNYLASADYDGVVKVCMS---CRLS 862 (874)
Q Consensus 838 --p~~--~~~laS~~~Dg~V~~WD~---~~~~ 862 (874)
|+. +.+||||+.||+|++||+ .+++
T Consensus 635 ~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~ 666 (902)
T 2oaj_A 635 YGDDGYSSILMVCGTDMGEVITYKILPASGGK 666 (902)
T ss_dssp CTTSSSEEEEEEEEETTSEEEEEEEEECGGGC
T ss_pred cCCCCCcceEEEEEecCCcEEEEEEecCCCCc
Confidence 853 479999999999999999 5653
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=98.94 E-value=2.3e-09 Score=118.76 Aligned_cols=79 Identities=10% Similarity=0.199 Sum_probs=67.7
Q ss_pred CCCCCCeeEEEECCCC-CEEEEecCCCcEEEeeCCCCCCCCcccccCeeee---cCCCceeEEEEeCCCCCEEEEeeCCC
Q 002843 776 NNSANVICSISFDRDE-DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM---SNRSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~-~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~---~~~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
.+|...|.+|+|+|++ .+|||||.|++|+|||+.+. .++..+ .|...|.+++|+| ++++||+++.||
T Consensus 128 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~ 198 (402)
T 2aq5_A 128 EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG--------AAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDK 198 (402)
T ss_dssp ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT--------EEEEEECTTTCCSCEEEEEECT-TSSCEEEEETTS
T ss_pred cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC--------CccEEEecCCCCCceEEEEECC-CCCEEEEEecCC
Confidence 3568999999999999 58999999999999999976 234444 2567899999999 688999999999
Q ss_pred cEEEEeCCCccc
Q 002843 852 VVKVCMSCRLST 863 (874)
Q Consensus 852 ~V~~WD~~~~~~ 863 (874)
+|+|||+.+++.
T Consensus 199 ~i~iwd~~~~~~ 210 (402)
T 2aq5_A 199 RVRVIEPRKGTV 210 (402)
T ss_dssp EEEEEETTTTEE
T ss_pred cEEEEeCCCCce
Confidence 999999998654
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.93 E-value=3.2e-09 Score=111.47 Aligned_cols=85 Identities=11% Similarity=0.231 Sum_probs=69.8
Q ss_pred eceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeee-ecCCCceeEEEEeCCC
Q 002843 762 SKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE-MSNRSKLSCVCWNNYI 840 (874)
Q Consensus 762 ~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~-~~~~~~v~~l~wnp~~ 840 (874)
..+++..+|+ +|.+.|.+|+| |++.+||||+.|++|+|||+.+. ..... ..+...|.+++|+| +
T Consensus 6 ~~~~~~~~l~-----~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~--------~~~~~~~~~~~~v~~~~~~~-~ 70 (313)
T 3odt_A 6 TGYQLSATLK-----GHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQ--------WLGTVVYTGQGFLNSVCYDS-E 70 (313)
T ss_dssp CCCEEEEEEC-----CCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSS--------EEEEEEEECSSCEEEEEEET-T
T ss_pred ccHHHHHHhh-----CCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCC--------EEEEEeecCCccEEEEEECC-C
Confidence 3455666665 35999999999 99999999999999999999765 12222 34678899999999 5
Q ss_pred CCEEEEeeCCCcEEEEeCCCc
Q 002843 841 KNYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 841 ~~~laS~~~Dg~V~~WD~~~~ 861 (874)
+.+||+|+.||.|++||+...
T Consensus 71 ~~~l~~~~~dg~i~~~~~~~~ 91 (313)
T 3odt_A 71 KELLLFGGKDTMINGVPLFAT 91 (313)
T ss_dssp TTEEEEEETTSCEEEEETTCC
T ss_pred CCEEEEecCCCeEEEEEeeec
Confidence 889999999999999999754
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.1e-09 Score=119.34 Aligned_cols=84 Identities=17% Similarity=0.114 Sum_probs=65.7
Q ss_pred CCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCc----------ccccCeeeecCCCceeEEEEeCCCCCEEEEe
Q 002843 778 SANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSV----------DVYYPAVEMSNRSKLSCVCWNNYIKNYLASA 847 (874)
Q Consensus 778 ~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~----------~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~ 847 (874)
|...|.+|+|+||+.+||||+.|++|+|||+++...... ....++..+.|...|.+++|+| ++.+||+|
T Consensus 145 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~ 223 (377)
T 3dwl_C 145 LRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSP-SGNALAYA 223 (377)
T ss_dssp CCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECT-TSSCEEEE
T ss_pred cCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECC-CCCEEEEE
Confidence 789999999999999999999999999999974311100 0112333345667899999999 57799999
Q ss_pred eCCCcEEEEeCCCcc
Q 002843 848 DYDGVVKVCMSCRLS 862 (874)
Q Consensus 848 ~~Dg~V~~WD~~~~~ 862 (874)
+.||+|+|||+.+++
T Consensus 224 ~~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 224 GHDSSVTIAYPSAPE 238 (377)
T ss_dssp ETTTEEC-CEECSTT
T ss_pred eCCCcEEEEECCCCC
Confidence 999999999998764
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=98.92 E-value=3.1e-09 Score=116.24 Aligned_cols=99 Identities=12% Similarity=0.045 Sum_probs=74.0
Q ss_pred ccceeeeeceeEeEEecccC--------CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec
Q 002843 755 LCKYARYSKFEVQGMLRTGE--------FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS 826 (874)
Q Consensus 755 l~~~~ry~~~~~~~~l~~~~--------~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~ 826 (874)
..+++...+.+++.++.... .+.|.+.|.+++|+||+++||||+.|++|+|||+.+. .++..+.
T Consensus 259 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~ 330 (397)
T 1sq9_A 259 CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK--------ERITTLN 330 (397)
T ss_dssp EEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--------EEEEEEE
T ss_pred eEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC--------ceeEEEe
Confidence 34445555556666654210 1116899999999999999999999999999999875 2222332
Q ss_pred -------C---------------CCceeEEEEeCCCC---------CEEEEeeCCCcEEEEeCCCc
Q 002843 827 -------N---------------RSKLSCVCWNNYIK---------NYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 827 -------~---------------~~~v~~l~wnp~~~---------~~laS~~~Dg~V~~WD~~~~ 861 (874)
+ ...|.+++|+|... .+||+|+.||+|+|||+.++
T Consensus 331 ~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 331 MHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred cccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 3 67899999999632 79999999999999999875
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=98.92 E-value=2.1e-10 Score=129.02 Aligned_cols=67 Identities=10% Similarity=0.015 Sum_probs=56.5
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCC----------cEEEec
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN----------QVKYIG 372 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~----------~vKLiD 372 (874)
.+++||||+|++|.+++. ..++..++.||+.+|.|||++|||||||||.|||++.++ .+.|||
T Consensus 186 ~~LVME~i~G~~L~~l~~-------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID 258 (397)
T 4gyi_A 186 HTIVMSLVDALPMRQVSS-------VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIX 258 (397)
T ss_dssp TEEEEECCSCEEGGGCCC-------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECC
T ss_pred ceEEEEecCCccHhhhcc-------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEE
Confidence 368999999999865432 234567899999999999999999999999999999877 389999
Q ss_pred cccc
Q 002843 373 PIIQ 376 (874)
Q Consensus 373 FGla 376 (874)
|+-+
T Consensus 259 ~~Q~ 262 (397)
T 4gyi_A 259 FPQM 262 (397)
T ss_dssp CTTC
T ss_pred eCCc
Confidence 9854
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=98.92 E-value=3.6e-09 Score=122.39 Aligned_cols=92 Identities=17% Similarity=0.134 Sum_probs=73.8
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec--CCCceeEEEEeCC---------CCC
Q 002843 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS--NRSKLSCVCWNNY---------IKN 842 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~--~~~~v~~l~wnp~---------~~~ 842 (874)
.+.+|...|.+++|+|||++||+|+.|++|+|||+.+. .++..+. |...|.+++|+|. +..
T Consensus 483 ~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~--------~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~ 554 (615)
T 1pgu_A 483 LKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSR--------EVKTSRWAFRTSKINAISWKPAEKGANEEEIEED 554 (615)
T ss_dssp CSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEECCSCCCSSCEEEEEECCCC------CCSCC
T ss_pred ccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCC--------cceeEeecCCCCceeEEEEcCccccccccccCCC
Confidence 34567999999999999999999999999999999876 2333333 5678999999993 478
Q ss_pred EEEEeeCCCcEEEEeCCCc-cc---eeeeeeeeee
Q 002843 843 YLASADYDGVVKVCMSCRL-ST---YCFRKKFVFT 873 (874)
Q Consensus 843 ~laS~~~Dg~V~~WD~~~~-~~---~~~~~~f~~~ 873 (874)
+||+|+.||+|+|||+.++ +. +..|..-|.+
T Consensus 555 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~ 589 (615)
T 1pgu_A 555 LVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNN 589 (615)
T ss_dssp EEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEE
T ss_pred EEEEEcCCCcEEEEECCCCceechhhhcCccceEE
Confidence 9999999999999999876 32 4445544443
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=98.92 E-value=2.5e-09 Score=118.29 Aligned_cols=54 Identities=7% Similarity=0.046 Sum_probs=42.2
Q ss_pred hhccceeeeec-eeEeEEecccCCCCCCCCeeEEEECC---CCCEEEEecCCCcEEEeeCCCC
Q 002843 753 DGLCKYARYSK-FEVQGMLRTGEFNNSANVICSISFDR---DEDHFAAAGVSKKIKIFEFNAL 811 (874)
Q Consensus 753 ~~l~~~~ry~~-~~~~~~l~~~~~~~~~~~V~si~F~~---d~~~lAT~g~dk~Ikiwd~~~~ 811 (874)
+...+.+.++. .+.++++. +|+..|..++|+| |+++|||||.|++|||||++++
T Consensus 156 d~~V~~~~~s~dG~~~~s~~-----~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG 213 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQF-----LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTG 213 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEE-----ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTC
T ss_pred CCcEEEEEECCCCceeeeec-----cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCC
Confidence 34445555533 66666665 3488899999999 7899999999999999999987
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.92 E-value=7.9e-10 Score=129.27 Aligned_cols=91 Identities=14% Similarity=0.079 Sum_probs=70.7
Q ss_pred CCCCCCeeEE--EECCCC-CEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCC--CceeEEEEeCCCCCEEEEeeCC
Q 002843 776 NNSANVICSI--SFDRDE-DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR--SKLSCVCWNNYIKNYLASADYD 850 (874)
Q Consensus 776 ~~~~~~V~si--~F~~d~-~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~--~~v~~l~wnp~~~~~laS~~~D 850 (874)
.+|.+.|.+| +|+|+| .+|||||.|++|||||+++.. ++.....+. ..|.+|+|+|+ ...||+++.|
T Consensus 305 ~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~-------~~~~~~~~~~~~~v~~v~fsp~-~~~l~s~~~d 376 (524)
T 2j04_B 305 QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA-------TTKTTVSRFRGSNLVPVVYCPQ-IYSYIYSDGA 376 (524)
T ss_dssp ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH-------HHCEEEEECSCCSCCCEEEETT-TTEEEEECSS
T ss_pred ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC-------cccccccccccCcccceEeCCC-cCeEEEeCCC
Confidence 3568999999 689998 899999999999999998751 111111122 24889999995 6689999999
Q ss_pred CcEEEEeCCCccc---eeeeeeeeeeC
Q 002843 851 GVVKVCMSCRLST---YCFRKKFVFTL 874 (874)
Q Consensus 851 g~V~~WD~~~~~~---~~~~~~f~~~~ 874 (874)
++|+|||+.+++. +.+|..-|++|
T Consensus 377 ~tv~lwd~~~~~~~~~l~gH~~~V~sv 403 (524)
T 2j04_B 377 SSLRAVPSRAAFAVHPLVSRETTITAI 403 (524)
T ss_dssp SEEEEEETTCTTCCEEEEECSSCEEEE
T ss_pred CcEEEEECcccccceeeecCCCceEEE
Confidence 9999999998643 67777777654
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=1e-09 Score=117.53 Aligned_cols=85 Identities=14% Similarity=0.262 Sum_probs=65.0
Q ss_pred CCCCCeeEEEECCCCC-EEEEecCCCcEEEeeCCCCCCCCc---cc-------c-cCeeeec-CCCceeEEEEeCCCCCE
Q 002843 777 NSANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSV---DV-------Y-YPAVEMS-NRSKLSCVCWNNYIKNY 843 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~-~lAT~g~dk~Ikiwd~~~~~~~~~---~~-------~-~p~~~~~-~~~~v~~l~wnp~~~~~ 843 (874)
+|...|.+++|+|++. +||||+.|++|+|||+++...... +. + .++..+. |...|.+++|+|. +.+
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~ 335 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPD-KRG 335 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSS-STT
T ss_pred CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCC-CCe
Confidence 6799999999999999 799999999999999986521110 00 0 1233444 5678999999995 556
Q ss_pred EE-EeeCCCcEEEEeCCCcc
Q 002843 844 LA-SADYDGVVKVCMSCRLS 862 (874)
Q Consensus 844 la-S~~~Dg~V~~WD~~~~~ 862 (874)
|| ||+.||+|+|||+.+..
T Consensus 336 l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 336 LCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEEETTSEEEEEEECC--
T ss_pred EEEEecCCCcEEEEECCCcc
Confidence 66 99999999999998753
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.1e-09 Score=119.92 Aligned_cols=99 Identities=7% Similarity=0.033 Sum_probs=78.6
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee--cCCCce
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM--SNRSKL 831 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~--~~~~~v 831 (874)
+..+++...+.+++.++.. ..|...|.+++|+|++.+||||+.|++|+|||+++. .++..+ .++..|
T Consensus 192 ~~i~iwd~~~~~~~~~~~~---~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~v 260 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIEN---SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN--------VLIRSWSFGDHAPI 260 (437)
T ss_dssp SEEEEEETTTCCEEEEEEC---CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT--------EEEEEEBCTTCEEE
T ss_pred CeEEEEeCCCCeeeEEEcc---CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc--------cEEEEEecCCCCce
Confidence 4456666666777777762 125789999999999999999999999999999975 344443 456789
Q ss_pred eEEEEeCC---CCCEEEEeeCCCcEEEEeCCCccc
Q 002843 832 SCVCWNNY---IKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 832 ~~l~wnp~---~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
.+|+|+|. +..+||+|+.||+|+|||+.+++.
T Consensus 261 ~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 261 THVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp EEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred EEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 99988874 355999999999999999997653
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=2.8e-09 Score=135.34 Aligned_cols=89 Identities=17% Similarity=0.312 Sum_probs=73.8
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcE
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVV 853 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V 853 (874)
+.+|.+.|.+++|+|||.+|||||.|++|+|||+.++ .++..+. |...|.|++|+| ++.+||||+.||+|
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~--------~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v 681 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETG--------EKLLDIKAHEDEVLCCAFSS-DDSYIATCSADKKV 681 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------CEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------CEEEEeccCCCCEEEEEEec-CCCEEEEEeCCCeE
Confidence 3467999999999999999999999999999999986 3344444 567899999999 57899999999999
Q ss_pred EEEeCCCccc---eeeeeeeee
Q 002843 854 KVCMSCRLST---YCFRKKFVF 872 (874)
Q Consensus 854 ~~WD~~~~~~---~~~~~~f~~ 872 (874)
+|||+.+++. +..+..-|.
T Consensus 682 ~vwd~~~~~~~~~~~~~~~~v~ 703 (1249)
T 3sfz_A 682 KIWDSATGKLVHTYDEHSEQVN 703 (1249)
T ss_dssp EEEETTTCCEEEEEECCSSCEE
T ss_pred EEEECCCCceEEEEcCCCCcEE
Confidence 9999998754 445554443
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=98.90 E-value=2.7e-09 Score=128.58 Aligned_cols=88 Identities=11% Similarity=0.163 Sum_probs=72.8
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
.+|++.|.+|+|+|||.+||+|+.|++|+|||+.++ ..+..+. |...|.+++|+| ++++||+|+.||+|+
T Consensus 10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ--------VEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIR 80 (814)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEE
T ss_pred ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC--------ceEEEEecCCCcEEEEEEeC-CCCEEEEEeCCCeEE
Confidence 346999999999999999999999999999999876 2333444 567899999999 588999999999999
Q ss_pred EEeCCCccc---eeeeeeeee
Q 002843 855 VCMSCRLST---YCFRKKFVF 872 (874)
Q Consensus 855 ~WD~~~~~~---~~~~~~f~~ 872 (874)
|||+.+++. +..+...|.
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~ 101 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIR 101 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEE
T ss_pred EEECCCCcEEEEEecCCCCEE
Confidence 999998744 555555444
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=98.90 E-value=1.9e-09 Score=122.73 Aligned_cols=77 Identities=12% Similarity=0.299 Sum_probs=65.0
Q ss_pred CCCCCCCeeEEEECCC-CCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcE
Q 002843 775 FNNSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d-~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V 853 (874)
+.+|...|.+|+|+|+ +.+||||+.|++|+|||+++.. .......|...|.|++|+|. +.+||+|+.||+|
T Consensus 145 ~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~-------~~~~~~~~~~~v~~v~wspd-g~~lasgs~dg~v 216 (434)
T 2oit_A 145 LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV-------KVCATLPSTVAVTSVCWSPK-GKQLAVGKQNGTV 216 (434)
T ss_dssp CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE-------EEEEEECGGGCEEEEEECTT-SSCEEEEETTSCE
T ss_pred cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc-------ceeeccCCCCceeEEEEcCC-CCEEEEEcCCCcE
Confidence 3457899999999998 7899999999999999998751 11222345678999999995 8899999999999
Q ss_pred EEEeCC
Q 002843 854 KVCMSC 859 (874)
Q Consensus 854 ~~WD~~ 859 (874)
++||+.
T Consensus 217 ~iwd~~ 222 (434)
T 2oit_A 217 VQYLPT 222 (434)
T ss_dssp EEECTT
T ss_pred EEEccC
Confidence 999998
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.90 E-value=2e-09 Score=125.98 Aligned_cols=79 Identities=14% Similarity=0.228 Sum_probs=62.2
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVC 856 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~W 856 (874)
.|...|.+|+|||||.+||+||.|++|+|||..+.... .+ |...+ ....|.+|+||| ++.+||+|+.||+|+||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~-l~-~~~~~---~~~sv~svafSP-DG~~LAsgs~DGtVkIW 156 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTN-LD-SKGNL---SSRTYHCFEWNP-IESSIVVGNEDGELQFF 156 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEEEEE-CC-CSSCS---TTTCEEEEEECS-SSSCEEEEETTSEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCceeee-cc-CCCcc---ccccEEEEEEcC-CCCEEEEEcCCCEEEEE
Confidence 34789999999999999999999999999996542111 11 21100 022599999999 58899999999999999
Q ss_pred eCCCc
Q 002843 857 MSCRL 861 (874)
Q Consensus 857 D~~~~ 861 (874)
|+..+
T Consensus 157 d~~~~ 161 (588)
T 2j04_A 157 SIRKN 161 (588)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99876
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=98.89 E-value=7.8e-09 Score=109.52 Aligned_cols=95 Identities=8% Similarity=0.076 Sum_probs=77.8
Q ss_pred ccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEE
Q 002843 755 LCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCV 834 (874)
Q Consensus 755 l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l 834 (874)
..+++...+.+++.+++ +|...|.+++|+|++.+||+|+.|++|+|||+++. .++..+.+...|.++
T Consensus 164 ~v~~~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--------~~~~~~~~~~~v~~~ 230 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQ-----GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--------RQLQQHDFTSQIFSL 230 (337)
T ss_dssp CEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEE
T ss_pred cEEEEeCCCCceeeeee-----cccCceEEEEECCCCCEEEEEecCCcEEEEECCCC--------ceEeeecCCCceEEE
Confidence 34555555666666665 24889999999999999999999999999999976 344455677889999
Q ss_pred EEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 835 CWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 835 ~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
+|+| ++.+||+++.||.|++||+.++..
T Consensus 231 ~~s~-~~~~l~~~~~~~~i~~~~~~~~~~ 258 (337)
T 1gxr_A 231 GYCP-TGEWLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp EECT-TSSEEEEEETTSCEEEEETTSSCE
T ss_pred EECC-CCCEEEEEcCCCcEEEEECCCCCe
Confidence 9999 478999999999999999987644
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=4.5e-09 Score=133.40 Aligned_cols=108 Identities=15% Similarity=0.115 Sum_probs=86.2
Q ss_pred hhccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCce
Q 002843 753 DGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKL 831 (874)
Q Consensus 753 ~~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v 831 (874)
++..+.+...+.+.+.+++ +|.+.|.+|+|+|||++|||||.|++|+|||+.++ .++..+. |...|
T Consensus 636 d~~i~vw~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~--------~~~~~~~~~~~~v 702 (1249)
T 3sfz_A 636 DKTLQVFKAETGEKLLDIK-----AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG--------KLVHTYDEHSEQV 702 (1249)
T ss_dssp TSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCE
T ss_pred CCeEEEEECCCCCEEEEec-----cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC--------ceEEEEcCCCCcE
Confidence 3456677777777777775 45899999999999999999999999999999976 2344443 56789
Q ss_pred eEEEEeCC-CCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeeee
Q 002843 832 SCVCWNNY-IKNYLASADYDGVVKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 832 ~~l~wnp~-~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
.|++|+|. ...+||||+.||+|++||+.+++. +..|...|.+
T Consensus 703 ~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~ 748 (1249)
T 3sfz_A 703 NCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNH 748 (1249)
T ss_dssp EEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEE
T ss_pred EEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEE
Confidence 99999996 456999999999999999998754 5556655543
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.89 E-value=2.2e-09 Score=115.01 Aligned_cols=91 Identities=11% Similarity=0.137 Sum_probs=70.9
Q ss_pred CCCCCeeEEEECCCCCE-EEEecC---CCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCC--CCEEEEeeCC
Q 002843 777 NSANVICSISFDRDEDH-FAAAGV---SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI--KNYLASADYD 850 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~-lAT~g~---dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~--~~~laS~~~D 850 (874)
+|.+.|.+|+|+|++.+ +|+|+. |++|+|||+.+.. ..+.....|...|.|++|+|.. +.+||+|+.|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD------LKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS------EEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc------ccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 46999999999999975 667776 9999999999751 1223344677899999999964 6899999999
Q ss_pred CcEEEEeCCCcc-c---eeeeeeeeee
Q 002843 851 GVVKVCMSCRLS-T---YCFRKKFVFT 873 (874)
Q Consensus 851 g~V~~WD~~~~~-~---~~~~~~f~~~ 873 (874)
|+|++||+.+++ . +..+...|.+
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v~~ 116 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEIINA 116 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCEEE
T ss_pred CeEEEEeCCCCCccEEEEEecccceEE
Confidence 999999999765 2 5556555543
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=98.89 E-value=5.2e-09 Score=114.42 Aligned_cols=98 Identities=18% Similarity=0.154 Sum_probs=75.6
Q ss_pred ccceeeeeceeEeEEecccCCCCC---CCCeeEEEECCCCCEEEEecCC---CcEEEeeCCCCCCCCcccccCeeeec--
Q 002843 755 LCKYARYSKFEVQGMLRTGEFNNS---ANVICSISFDRDEDHFAAAGVS---KKIKIFEFNALFNDSVDVYYPAVEMS-- 826 (874)
Q Consensus 755 l~~~~ry~~~~~~~~l~~~~~~~~---~~~V~si~F~~d~~~lAT~g~d---k~Ikiwd~~~~~~~~~~~~~p~~~~~-- 826 (874)
..+++...+.+++.++.. ..+| ...|.+|+|+|++.+||+|+.| ++|+|||+++. .++..+.
T Consensus 208 ~i~i~d~~~~~~~~~~~~--~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~--------~~~~~~~~~ 277 (397)
T 1sq9_A 208 TVQISELSTLRPLYNFES--QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG--------ERIGSLSVP 277 (397)
T ss_dssp EEEEEETTTTEEEEEEEC--CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC--------CEEEEECBC
T ss_pred cEEEEECCCCceeEEEec--cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC--------cccceeccC
Confidence 344555555556655542 1236 8899999999999999999999 99999999875 2333333
Q ss_pred ------------CCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 827 ------------NRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 827 ------------~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
+...|.+++|+| +..+||+++.||+|+|||+.+++.
T Consensus 278 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 278 THSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp --------CCBSBSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEE
T ss_pred cccccccccccccCCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCce
Confidence 567899999999 578999999999999999987754
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=98.89 E-value=1.5e-09 Score=123.50 Aligned_cols=86 Identities=14% Similarity=0.173 Sum_probs=66.5
Q ss_pred CCCCeeEEEECCCCCEEE----EecCCCcEEEeeCCCCCCCCcccccC---eeeec-CCCceeEEEEeCCCCCEEEEeeC
Q 002843 778 SANVICSISFDRDEDHFA----AAGVSKKIKIFEFNALFNDSVDVYYP---AVEMS-NRSKLSCVCWNNYIKNYLASADY 849 (874)
Q Consensus 778 ~~~~V~si~F~~d~~~lA----T~g~dk~Ikiwd~~~~~~~~~~~~~p---~~~~~-~~~~v~~l~wnp~~~~~laS~~~ 849 (874)
+...|.+|+|+|||.+|| ||+.|++|+|||+.+..........+ +..+. |.+.|.+|+|+|..+++|||++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 467899999999999999 99999999999987641110000012 22222 45789999999977899999999
Q ss_pred CCcEEEEeCCCccc
Q 002843 850 DGVVKVCMSCRLST 863 (874)
Q Consensus 850 Dg~V~~WD~~~~~~ 863 (874)
||+|+|||+.+++.
T Consensus 171 Dg~v~iwD~~~~~~ 184 (434)
T 2oit_A 171 DGSIAVLQVTETVK 184 (434)
T ss_dssp TSCEEEEEESSSEE
T ss_pred CCeEEEEEcCCCcc
Confidence 99999999987643
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.89 E-value=3.1e-09 Score=131.99 Aligned_cols=91 Identities=10% Similarity=0.044 Sum_probs=72.8
Q ss_pred cceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEE
Q 002843 756 CKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVC 835 (874)
Q Consensus 756 ~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~ 835 (874)
.+.+.....+....+. |...|.+|+|+| |++|||||.|++|+|||+.+. ..+..+.+++.|.+++
T Consensus 41 I~lw~~~~~~~~~~~~------~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~--------~~~~~~~~~~~V~~v~ 105 (902)
T 2oaj_A 41 VHIYGQQQVEVVIKLE------DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ--------KVLTTVFVPGKITSID 105 (902)
T ss_dssp EEEECSTTCEEEEECS------SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC--------SEEEEEECSSCEEEEE
T ss_pred EEEEeCCCcEEEEEcC------CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC--------cEEEEEcCCCCEEEEE
Confidence 3444444444444443 378999999999 889999999999999999875 2344455678899999
Q ss_pred EeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 836 WNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 836 wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
|+| +.++||+|+.||+|++||+.+++
T Consensus 106 ~sp-~g~~l~sgs~dg~V~lwd~~~~~ 131 (902)
T 2oaj_A 106 TDA-SLDWMLIGLQNGSMIVYDIDRDQ 131 (902)
T ss_dssp CCT-TCSEEEEEETTSCEEEEETTTTE
T ss_pred ECC-CCCEEEEEcCCCcEEEEECCCCc
Confidence 999 58899999999999999998764
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.89 E-value=9e-09 Score=110.95 Aligned_cols=98 Identities=11% Similarity=0.092 Sum_probs=75.2
Q ss_pred hccceeeeecee--EeEEecccCCCCCCCCeeEEEECCC--CCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCC
Q 002843 754 GLCKYARYSKFE--VQGMLRTGEFNNSANVICSISFDRD--EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRS 829 (874)
Q Consensus 754 ~l~~~~ry~~~~--~~~~l~~~~~~~~~~~V~si~F~~d--~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~ 829 (874)
+..+++...+.+ .+..+. +|...|.+++|+|+ +.+||+|+.|++|+|||+.+... ..+.....+..
T Consensus 79 g~v~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-----~~~~~~~~~~~ 148 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHA-----VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-----TSPIIIDAHAI 148 (379)
T ss_dssp SCEEEEEEETTEEEEEEEEC-----CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC-----CCEEEEECCTT
T ss_pred CEEEEEEcCCCceeEeeeec-----CCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-----eeeEEecCCCC
Confidence 445566655554 343333 35889999999999 99999999999999999987511 11222234667
Q ss_pred ceeEEEEeCC------------CCCEEEEeeCCCcEEEEeCCCc
Q 002843 830 KLSCVCWNNY------------IKNYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 830 ~v~~l~wnp~------------~~~~laS~~~Dg~V~~WD~~~~ 861 (874)
.|.+++|+|. +..+||+|+.||+|+|||+.++
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 192 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSD 192 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETT
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCC
Confidence 8999999995 5889999999999999999765
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.89 E-value=3.3e-09 Score=116.62 Aligned_cols=78 Identities=13% Similarity=0.153 Sum_probs=68.1
Q ss_pred CCCCCeeEEEECC-CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 777 NSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 777 ~~~~~V~si~F~~-d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
+|...|.+++|+| ++.+||||+.|++|+|||+.+. .++..+. |...|.+++|+|..+.+||+++.||+|+
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA--------EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC--------CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC--------ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 6789999999999 9999999999999999999876 3445554 5678999999997558999999999999
Q ss_pred EEeCCCcc
Q 002843 855 VCMSCRLS 862 (874)
Q Consensus 855 ~WD~~~~~ 862 (874)
|||+.+..
T Consensus 332 iw~~~~~~ 339 (416)
T 2pm9_A 332 VQTLQNLT 339 (416)
T ss_dssp EEESCCCC
T ss_pred EEEccCCC
Confidence 99998754
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=98.89 E-value=3e-09 Score=114.88 Aligned_cols=78 Identities=14% Similarity=0.201 Sum_probs=66.4
Q ss_pred CCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEEE
Q 002843 778 SANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKVC 856 (874)
Q Consensus 778 ~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~W 856 (874)
|.+.|.+++|+|||++||+|+.|++|+|||+.+.. ..++..+. |...|.+++|+| ++.+||+++.||+|++|
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~------~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK------WVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE------EEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc------EEeeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEE
Confidence 68999999999999999999999999999988651 01334443 567899999999 58899999999999999
Q ss_pred eCCCcc
Q 002843 857 MSCRLS 862 (874)
Q Consensus 857 D~~~~~ 862 (874)
|+.+++
T Consensus 80 d~~~~~ 85 (372)
T 1k8k_C 80 TLKGRT 85 (372)
T ss_dssp EEETTE
T ss_pred ECCCCe
Confidence 998764
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=98.87 E-value=6.5e-09 Score=116.97 Aligned_cols=92 Identities=12% Similarity=0.120 Sum_probs=71.5
Q ss_pred eeEeEEecccCCCCCCCCeeEEEECCCCC-EEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCC
Q 002843 764 FEVQGMLRTGEFNNSANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIK 841 (874)
Q Consensus 764 ~~~~~~l~~~~~~~~~~~V~si~F~~d~~-~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~ 841 (874)
++.+.++. +|...|++|+|+|++. +||||+.|++|+|||+.+........ .+...+ .|...|.+|+|+|.++
T Consensus 171 ~~~~~~~~-----~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~ 244 (430)
T 2xyi_A 171 CQPDLRLR-----GHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVI-DAKNIFTGHTAVVEDVAWHLLHE 244 (430)
T ss_dssp CCCSEEEE-----CCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEE-ECSEEECCCSSCEEEEEECSSCT
T ss_pred CCCcEEec-----CCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCcee-ccceeecCCCCCEeeeEEeCCCC
Confidence 44444444 4588999999999999 99999999999999999742111001 123333 4667899999999889
Q ss_pred CEEEEeeCCCcEEEEeCCCc
Q 002843 842 NYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 842 ~~laS~~~Dg~V~~WD~~~~ 861 (874)
.+|||++.||.|++||+.+.
T Consensus 245 ~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 245 SLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp TEEEEEETTSEEEEEETTCS
T ss_pred CEEEEEeCCCeEEEEECCCC
Confidence 99999999999999999865
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=98.87 E-value=3.7e-09 Score=116.80 Aligned_cols=85 Identities=13% Similarity=-0.000 Sum_probs=69.6
Q ss_pred CCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeC
Q 002843 780 NVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIKNYLASADYDGVVKVCMS 858 (874)
Q Consensus 780 ~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~ 858 (874)
..++...|+|||++||+|+.|++|+|||+.+. .+...+ .|.+.|.+|+|+| ++.+||+|+.||+|++||+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN--------LQREIDQAHVSEITKLKFFP-SGEALISSSQDMQLKIWSV 168 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSC--------EEEEETTSSSSCEEEEEECT-TSSEEEEEETTSEEEEEET
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCc--------ceeeecccccCccEEEEECC-CCCEEEEEeCCCeEEEEeC
Confidence 67778899999999999999999999999865 233333 4668899999999 5779999999999999999
Q ss_pred CCccc---eeeeeeeeee
Q 002843 859 CRLST---YCFRKKFVFT 873 (874)
Q Consensus 859 ~~~~~---~~~~~~f~~~ 873 (874)
.+++. +..|...|.+
T Consensus 169 ~~~~~~~~~~~h~~~v~~ 186 (420)
T 3vl1_A 169 KDGSNPRTLIGHRATVTD 186 (420)
T ss_dssp TTCCCCEEEECCSSCEEE
T ss_pred CCCcCceEEcCCCCcEEE
Confidence 87643 6666666554
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=98.86 E-value=7.3e-09 Score=111.82 Aligned_cols=96 Identities=11% Similarity=0.190 Sum_probs=74.0
Q ss_pred cceeeeecee--EeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeE
Q 002843 756 CKYARYSKFE--VQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSC 833 (874)
Q Consensus 756 ~~~~ry~~~~--~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~ 833 (874)
.+++.....+ .+.++. +|...|.+|+|+|++++||||+.|++|+|||+.+.. .........+...|.+
T Consensus 32 v~i~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-----~~~~~~~~~~~~~v~~ 101 (372)
T 1k8k_C 32 VHIYEKSGNKWVQVHELK-----EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT-----WKPTLVILRINRAARC 101 (372)
T ss_dssp EEEEEEETTEEEEEEEEE-----CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE-----EEEEEECCCCSSCEEE
T ss_pred EEEEeCCCCcEEeeeeec-----CCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe-----eeeeEEeecCCCceeE
Confidence 3444444444 666665 358899999999999999999999999999997651 0111112345678999
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 834 VCWNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 834 l~wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
++|+| ++++||+|+.||.|++||+...+
T Consensus 102 ~~~~~-~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 102 VRWAP-NEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp EEECT-TSSEEEEEETTSSEEEEEEETTT
T ss_pred EEECC-CCCEEEEEeCCCEEEEEEecCCC
Confidence 99999 47899999999999999998764
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.86 E-value=9.5e-09 Score=114.10 Aligned_cols=79 Identities=15% Similarity=0.368 Sum_probs=68.4
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEee--CCCcE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASAD--YDGVV 853 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~--~Dg~V 853 (874)
+|...|++++|+||+.+||||+.|++|+|||+++. .++..+. +...|.+++|+|....+||+|+ .||.|
T Consensus 215 ~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i 286 (401)
T 4aez_A 215 GHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS--------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQI 286 (401)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS--------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEE
T ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC--------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEE
Confidence 46899999999999999999999999999999975 3444443 5678999999998888999976 89999
Q ss_pred EEEeCCCccc
Q 002843 854 KVCMSCRLST 863 (874)
Q Consensus 854 ~~WD~~~~~~ 863 (874)
++||+.+++.
T Consensus 287 ~i~d~~~~~~ 296 (401)
T 4aez_A 287 HFWNAATGAR 296 (401)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCCE
Confidence 9999987754
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.86 E-value=9.3e-09 Score=107.93 Aligned_cols=94 Identities=11% Similarity=0.117 Sum_probs=74.1
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~ 832 (874)
+..+++...+.+.+.+++ +|...|.+++|+|+| +||+||.|++|+|||+.+. .++..+. +...|.
T Consensus 205 g~i~i~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~--------~~~~~~~~~~~~i~ 270 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYE-----GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENG--------SLKQVITLPAISIW 270 (313)
T ss_dssp SEEEEEETTTCCEEEEEE-----CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTC--------CEEEEEECSSSCEE
T ss_pred CeEEEEECCchhhhhhhh-----cCCceEEEEEEecCC-CEEEEecCCEEEEEECCCC--------ceeEEEeccCceEE
Confidence 445566666667777765 348899999999999 7999999999999999876 2344444 456899
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
+++|+|. +. |++++.||.|+|||+.+++.
T Consensus 271 ~~~~~~~-~~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 271 SVDCMSN-GD-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp EEEECTT-SC-EEEEETTSCEEEEESCGGGC
T ss_pred EEEEccC-CC-EEEEeCCCcEEEEeCCCCce
Confidence 9999995 44 66799999999999997644
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=98.86 E-value=5.3e-09 Score=126.07 Aligned_cols=105 Identities=15% Similarity=0.175 Sum_probs=83.9
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~ 832 (874)
+..+.+.+.+.+.+.++. +|.+.|.+++|+|||++||+||.|++|+|||+.++ ..+..+. |.+.|.
T Consensus 35 g~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~--------~~~~~~~~~~~~v~ 101 (814)
T 3mkq_A 35 GRVEIWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--------EKVVDFEAHPDYIR 101 (814)
T ss_dssp SEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEE
T ss_pred CEEEEEECCCCceEEEEe-----cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--------cEEEEEecCCCCEE
Confidence 556777777778887776 34889999999999999999999999999999876 2334444 667899
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCc-c---ceeeeeeeee
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRL-S---TYCFRKKFVF 872 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~-~---~~~~~~~f~~ 872 (874)
+++|+| ++.+||+|+.||+|++||+.++ . .+..+...|.
T Consensus 102 ~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~ 144 (814)
T 3mkq_A 102 SIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVM 144 (814)
T ss_dssp EEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEE
T ss_pred EEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEE
Confidence 999999 5779999999999999999875 2 2444544443
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=98.86 E-value=9e-09 Score=115.83 Aligned_cols=94 Identities=18% Similarity=0.322 Sum_probs=73.1
Q ss_pred CCCCCCCeeEEEECC-CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCCCEEEEeeCCCc
Q 002843 775 FNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 775 ~~~~~~~V~si~F~~-d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
+.+|...|.+|+|+| ++.+||||+.|++|+|||+++.. ...++..+ .|.+.|.+|+|+|....+||+|+.||+
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~-----~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~ 301 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN-----TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT 301 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC-----SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC-----CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCe
Confidence 346789999999999 66789999999999999999751 11344444 466789999999987779999999999
Q ss_pred EEEEeCCCc-c---ceeeeeeeeee
Q 002843 853 VKVCMSCRL-S---TYCFRKKFVFT 873 (874)
Q Consensus 853 V~~WD~~~~-~---~~~~~~~f~~~ 873 (874)
|+|||+... + .+..+..-|.+
T Consensus 302 v~vwd~~~~~~~~~~~~~h~~~v~~ 326 (430)
T 2xyi_A 302 VALWDLRNLKLKLHSFESHKDEIFQ 326 (430)
T ss_dssp EEEEETTCTTSCSEEEECCSSCEEE
T ss_pred EEEEeCCCCCCCeEEeecCCCCEEE
Confidence 999999863 2 24445554443
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.85 E-value=1.5e-08 Score=110.88 Aligned_cols=77 Identities=12% Similarity=0.222 Sum_probs=63.8
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKV 855 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~ 855 (874)
+|.+.|.+|+|+|||.+||+|+.|++|+|||... ..+..+. |...|.+++|+| +..+|++++.||.|++
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~---------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i 175 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTG---------ALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTIL 175 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEETTS---------CEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC---------CeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEE
Confidence 4788999999999999999999999999999332 2233343 567899999999 5779999999999999
Q ss_pred EeCCCccc
Q 002843 856 CMSCRLST 863 (874)
Q Consensus 856 WD~~~~~~ 863 (874)
||+.+++.
T Consensus 176 wd~~~~~~ 183 (425)
T 1r5m_A 176 WNVISGTV 183 (425)
T ss_dssp EETTTTEE
T ss_pred EECCCCcE
Confidence 99987644
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.85 E-value=1e-08 Score=111.79 Aligned_cols=89 Identities=11% Similarity=0.132 Sum_probs=67.8
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCc---------------------------------------
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSV--------------------------------------- 816 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~--------------------------------------- 816 (874)
.+|...|.+++|+|+|++||||+.|++|+|||+.+......
T Consensus 242 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~ 321 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTV 321 (408)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEET
T ss_pred ccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEEC
Confidence 56789999999999999999999999999999997522110
Q ss_pred ccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCcccee
Q 002843 817 DVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLSTYC 865 (874)
Q Consensus 817 ~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~~~ 865 (874)
....++..+. |...|.+++|+| ++.+||+|+.||+|+|||+.+++.+.
T Consensus 322 ~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 322 YSGEQITMLKGHYKTVDCCVFQS-NFQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp TTCCEEEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEEEECC-----
T ss_pred cCCcceeeeccCCCeEEEEEEcC-CCCEEEEECCCCeEEEEeCCCCCccC
Confidence 0012334444 557899999999 57899999999999999999876543
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=98.84 E-value=1.1e-08 Score=115.01 Aligned_cols=95 Identities=8% Similarity=0.158 Sum_probs=77.3
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~ 832 (874)
+..+.+...+.+.+.++. +|.+.|.+++|+|++ +|||||.|++|+|||+.++ .++..+. |.+.|.
T Consensus 142 g~i~vwd~~~~~~~~~~~-----~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~--------~~~~~~~~h~~~v~ 207 (464)
T 3v7d_B 142 KMIRVYDSINKKFLLQLS-----GHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG--------CCTHVFEGHNSTVR 207 (464)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTT--------EEEEEECCCSSCEE
T ss_pred CcEEEEECCCCcEEEEEe-----CCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCC--------cEEEEECCCCCccE
Confidence 445666666677777765 469999999999999 9999999999999999976 2344444 668899
Q ss_pred EEEEeCC-CCCEEEEeeCCCcEEEEeCCCcc
Q 002843 833 CVCWNNY-IKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 833 ~l~wnp~-~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
|++|+|. +..+||+|+.||+|++||+.+.+
T Consensus 208 ~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~ 238 (464)
T 3v7d_B 208 CLDIVEYKNIKYIVTGSRDNTLHVWKLPKES 238 (464)
T ss_dssp EEEEEESSSCEEEEEEETTSCEEEEECCCCC
T ss_pred EEEEecCCCCCEEEEEcCCCcEEEeeCCCCc
Confidence 9999963 46799999999999999998754
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.1e-08 Score=109.73 Aligned_cols=94 Identities=15% Similarity=0.078 Sum_probs=78.0
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeE
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSC 833 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~ 833 (874)
+..+++...+.+.+.++. +|.+.|.+++|+||+++||||+.|++|+|||+.+. ..+..+.+...|.+
T Consensus 54 g~i~vwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~v~~ 120 (369)
T 3zwl_B 54 SSASVWYSLNGERLGTLD-----GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNG--------QCVATWKSPVPVKR 120 (369)
T ss_dssp SCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC--------CEEEEEECSSCEEE
T ss_pred CEEEEEeCCCchhhhhhh-----hcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--------cEEEEeecCCCeEE
Confidence 344566666667777765 35889999999999999999999999999999876 34445557788999
Q ss_pred EEEeCCCCCEEEEeeCC-----CcEEEEeCCCc
Q 002843 834 VCWNNYIKNYLASADYD-----GVVKVCMSCRL 861 (874)
Q Consensus 834 l~wnp~~~~~laS~~~D-----g~V~~WD~~~~ 861 (874)
++|+| +..+|++++.| |.|.+||+...
T Consensus 121 ~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 121 VEFSP-CGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp EEECT-TSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred EEEcc-CCCEEEEecCCccCCCCEEEEEEecCC
Confidence 99999 57899999999 99999999865
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=98.83 E-value=1.8e-08 Score=106.67 Aligned_cols=95 Identities=8% Similarity=0.006 Sum_probs=76.1
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeE
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSC 833 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~ 833 (874)
+..+++...+.+.+..+.+ ...|.+++|+|+|++||+|+.|++|+|||+.+.. ......+...|.+
T Consensus 205 g~i~~~d~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~v~~ 270 (337)
T 1gxr_A 205 NTVRSWDLREGRQLQQHDF------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD--------KYQLHLHESCVLS 270 (337)
T ss_dssp SEEEEEETTTTEEEEEEEC------SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC--------EEEECCCSSCEEE
T ss_pred CcEEEEECCCCceEeeecC------CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC--------eEEEcCCccceeE
Confidence 3445555556666666654 6789999999999999999999999999998751 2222346678999
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 834 VCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 834 l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
++|+| ++.+||+++.||.|++||+.+++.
T Consensus 271 ~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 271 LKFAY-CGKWFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp EEECT-TSSEEEEEETTSEEEEEETTTCCE
T ss_pred EEECC-CCCEEEEecCCCcEEEEECCCCeE
Confidence 99999 577999999999999999998755
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.83 E-value=6.2e-09 Score=117.57 Aligned_cols=79 Identities=13% Similarity=0.166 Sum_probs=67.5
Q ss_pred CCCCCCCeeEEEECCC---CCEEEEecCCCcEEEeeCCCCCCCCcccccCeee-e-cCCCceeEEEEeCCCCCEEEEeeC
Q 002843 775 FNNSANVICSISFDRD---EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE-M-SNRSKLSCVCWNNYIKNYLASADY 849 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d---~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~-~-~~~~~v~~l~wnp~~~~~laS~~~ 849 (874)
+.+|...|.+|+|+|| +.+||||+.|++|+|||+.+. ..+.. + .|.+.|.+++|+ ++.+||||+.
T Consensus 191 ~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~--------~~~~~~~~~h~~~v~~~~~s--d~~~l~s~~~ 260 (450)
T 2vdu_B 191 ILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC--------FIVDKWLFGHKHFVSSICCG--KDYLLLSAGG 260 (450)
T ss_dssp SEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT--------TCEEEECCCCSSCEEEEEEC--STTEEEEEES
T ss_pred eecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC--------ceeeeeecCCCCceEEEEEC--CCCEEEEEeC
Confidence 4567899999999999 999999999999999999875 22322 3 356789999999 6889999999
Q ss_pred CCcEEEEeCCCccc
Q 002843 850 DGVVKVCMSCRLST 863 (874)
Q Consensus 850 Dg~V~~WD~~~~~~ 863 (874)
||+|+|||+.+++.
T Consensus 261 d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 261 DDKIFAWDWKTGKN 274 (450)
T ss_dssp SSEEEEEETTTCCE
T ss_pred CCeEEEEECCCCcE
Confidence 99999999998754
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.83 E-value=1.7e-08 Score=112.19 Aligned_cols=101 Identities=15% Similarity=0.148 Sum_probs=74.0
Q ss_pred hccceeeee-ceeEeEEe--cccCCCCCCCCeeEEEECCCC-CEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCC-
Q 002843 754 GLCKYARYS-KFEVQGML--RTGEFNNSANVICSISFDRDE-DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR- 828 (874)
Q Consensus 754 ~l~~~~ry~-~~~~~~~l--~~~~~~~~~~~V~si~F~~d~-~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~- 828 (874)
+..+++... ..+.+..+ +...+.+|...|.+++|+|+| .+||||+.|++|+|||+++... ...++..+..+
T Consensus 198 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~ 273 (447)
T 3dw8_B 198 LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL----CDRHSKLFEEPE 273 (447)
T ss_dssp SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS----SCTTCEEECCC-
T ss_pred CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc----ccceeeEeccCC
Confidence 344555544 23333333 233566789999999999999 8999999999999999997621 01123334433
Q ss_pred ------------CceeEEEEeCCCCCEEEEeeCCCcEEEEeCCC
Q 002843 829 ------------SKLSCVCWNNYIKNYLASADYDGVVKVCMSCR 860 (874)
Q Consensus 829 ------------~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~ 860 (874)
+.|.+|+|+| ++.+||+++. |+|+|||+..
T Consensus 274 ~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 274 DPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp ----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTC
T ss_pred CccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCC
Confidence 2799999999 5889999999 9999999986
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.82 E-value=3.7e-09 Score=128.34 Aligned_cols=82 Identities=23% Similarity=0.231 Sum_probs=66.5
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCC-CCEEEEeeCCCc
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYI-KNYLASADYDGV 852 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~-~~~laS~~~Dg~ 852 (874)
+.+|.+.|.+++|+|||++|||||.|++|+|||+.+.. ..++..+. |.+.|.+|+|+|.. +++||||+.||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~------~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE------EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC------CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 45689999999999999999999999999999987431 12333443 66789999999842 789999999999
Q ss_pred EEEEeCCCcc
Q 002843 853 VKVCMSCRLS 862 (874)
Q Consensus 853 V~~WD~~~~~ 862 (874)
|++||+.+++
T Consensus 79 I~vwd~~~~~ 88 (753)
T 3jro_A 79 VLIWKEENGR 88 (753)
T ss_dssp EEEEEEETTE
T ss_pred EEEEECCCCc
Confidence 9999998764
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=98.82 E-value=1.3e-08 Score=112.43 Aligned_cols=75 Identities=13% Similarity=0.132 Sum_probs=59.6
Q ss_pred CCCCCeeEEEECCCCCEEE--EecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 777 NSANVICSISFDRDEDHFA--AAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lA--T~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
++...|.+|+|+|||++|| ||+.|++|||||+.++ .++.++.+++.|.+|+|+| ++.+||+++.|+++
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~--------~~~~~~~~~~~V~~v~fsp-dg~~l~s~s~~~~~- 200 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL--------TEKFEIETRGEVKDLHFST-DGKVVAYITGSSLE- 200 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT--------EEEEEEECSSCCCEEEECT-TSSEEEEECSSCEE-
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC--------cEEEEeCCCCceEEEEEcc-CCceEEeccceeEE-
Confidence 4457799999999999965 5668999999999986 3455667788899999999 57899999966555
Q ss_pred EEeCCCc
Q 002843 855 VCMSCRL 861 (874)
Q Consensus 855 ~WD~~~~ 861 (874)
+|+..++
T Consensus 201 ~~~~~~~ 207 (365)
T 4h5i_A 201 VISTVTG 207 (365)
T ss_dssp EEETTTC
T ss_pred EEEeccC
Confidence 5555544
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=98.80 E-value=1.8e-08 Score=113.27 Aligned_cols=94 Identities=14% Similarity=0.197 Sum_probs=76.7
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~ 832 (874)
+..+++...+.+.+.++. +|.+.|.+++|+|++.+||||+.|++|+|||++++ .++..+. |...|.
T Consensus 290 ~~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~--------~~~~~~~~h~~~v~ 356 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILS-----GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG--------ELMYTLQGHTALVG 356 (464)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCEE
T ss_pred CeEEEEECCCCcEEEEec-----CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--------cEEEEEeCCCCcEE
Confidence 445566666667776664 35899999999999999999999999999999876 3445554 567899
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
+++|++ .+|+||+.||+|++||+.++..
T Consensus 357 ~~~~~~---~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 357 LLRLSD---KFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp EEEECS---SEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEcC---CEEEEEeCCCcEEEEECCCCce
Confidence 999984 5999999999999999997643
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-08 Score=111.94 Aligned_cols=99 Identities=11% Similarity=0.052 Sum_probs=74.8
Q ss_pred ccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCC--Cccc----------ccCe
Q 002843 755 LCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFND--SVDV----------YYPA 822 (874)
Q Consensus 755 l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~--~~~~----------~~p~ 822 (874)
..+++...+.+++..+. .|...|.+++|+|+|.+||+|+.|++|+|||+.+.... .... ..++
T Consensus 311 ~i~i~d~~~~~~~~~~~-----~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (425)
T 1r5m_A 311 SVRLWSLKQNTLLALSI-----VDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLY 385 (425)
T ss_dssp EEEEEETTTTEEEEEEE-----CTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEE
T ss_pred cEEEEECCCCcEeEecc-----cCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhh
Confidence 44566666667777766 24789999999999999999999999999999865200 0000 0145
Q ss_pred eeecCC--C-ceeEEEEeCCCCCEEEEeeCCCcEEEEeCC
Q 002843 823 VEMSNR--S-KLSCVCWNNYIKNYLASADYDGVVKVCMSC 859 (874)
Q Consensus 823 ~~~~~~--~-~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~ 859 (874)
..+..+ . .|.+++|+|. +.+||+++.||+|+|||+.
T Consensus 386 ~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 386 ASYQSSQDNDYIFDLSWNCA-GNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEECCTTCCCCEEEEEECTT-SSEEEEEESSSCCEEEECC
T ss_pred hhhcCcccCCceEEEEccCC-CceEEEEecCceEEEEeec
Confidence 555544 3 8999999994 7799999999999999985
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.79 E-value=2.8e-08 Score=110.28 Aligned_cols=104 Identities=13% Similarity=0.194 Sum_probs=78.9
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~ 832 (874)
+-.+++...+.+....+.. .|...|.+|+|+|||.+||+|+.|++|+|||+.+. ..+..+ .|...|.
T Consensus 113 ~~v~lw~~~~~~~~~~~~~----~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~v~ 180 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAET----DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ--------TKLRTMAGHQARVG 180 (401)
T ss_dssp TEEEEEETTTCCEEEEEEC----CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------CEEEEECCCSSCEE
T ss_pred CeEEEeeCCCCcEeEeeec----CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC--------eEEEEecCCCCceE
Confidence 4455666666666655553 26889999999999999999999999999999875 233444 3567899
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCc-c---ceeeeeeeee
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRL-S---TYCFRKKFVF 872 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~-~---~~~~~~~f~~ 872 (874)
+++|++ ++|++|+.||+|++||+... . .+..+...|.
T Consensus 181 ~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 221 (401)
T 4aez_A 181 CLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVC 221 (401)
T ss_dssp EEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE
T ss_pred EEEECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCee
Confidence 999965 59999999999999999843 2 2555555444
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=98.78 E-value=2e-08 Score=107.30 Aligned_cols=94 Identities=10% Similarity=0.145 Sum_probs=69.6
Q ss_pred CCCCCeeEEEECC-CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-C---------CCceeEEEEeCCCCCEEE
Q 002843 777 NSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-N---------RSKLSCVCWNNYIKNYLA 845 (874)
Q Consensus 777 ~~~~~V~si~F~~-d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~---------~~~v~~l~wnp~~~~~la 845 (874)
.|...|.+|+|+| ++.+||+|+.|++|+|||++...... ...+...+. + ...|.+++|+| ++.+||
T Consensus 191 ~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~ 267 (342)
T 1yfq_A 191 GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY--NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLY 267 (342)
T ss_dssp SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCST--TCTTCEEEECCCCCTTCCSSCCCEEEEEECT-TTCCEE
T ss_pred CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccc--ccccceeeecccccccccccceeEEEEEEcC-CCCEEE
Confidence 3577899999999 99999999999999999998641000 002222332 2 23899999999 577999
Q ss_pred EeeCCCcEEEEeCCCccc---eeee-eeeeee
Q 002843 846 SADYDGVVKVCMSCRLST---YCFR-KKFVFT 873 (874)
Q Consensus 846 S~~~Dg~V~~WD~~~~~~---~~~~-~~f~~~ 873 (874)
+|+.||+|+|||+.+++. +..+ ..-|.+
T Consensus 268 ~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~ 299 (342)
T 1yfq_A 268 TAGSDGIISCWNLQTRKKIKNFAKFNEDSVVK 299 (342)
T ss_dssp EEETTSCEEEEETTTTEEEEECCCCSSSEEEE
T ss_pred EecCCceEEEEcCccHhHhhhhhcccCCCceE
Confidence 999999999999998754 4444 444443
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.8e-08 Score=122.28 Aligned_cols=97 Identities=13% Similarity=0.106 Sum_probs=75.8
Q ss_pred hccceeeee--ceeEeEEecccCCCCCCCCeeEEEECCC--CCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCC
Q 002843 754 GLCKYARYS--KFEVQGMLRTGEFNNSANVICSISFDRD--EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNR 828 (874)
Q Consensus 754 ~l~~~~ry~--~~~~~~~l~~~~~~~~~~~V~si~F~~d--~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~ 828 (874)
+..+.+... +.+.+.+++ +|.+.|.+|+|+|+ +.+|||||.|++|+|||+.+.. ..++..+ .|.
T Consensus 31 g~I~vwd~~~~~~~~~~~l~-----~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~------~~~~~~~~~h~ 99 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLT-----GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR------WSQIAVHAVHS 99 (753)
T ss_dssp TEEEEEEEETTEEEEEEEEC-----CCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE------EEEEEEECCCS
T ss_pred CcEEEEecCCCCCccceecc-----CCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc------ccccccccCCC
Confidence 445555555 455555554 45999999999998 9999999999999999998751 1123333 366
Q ss_pred CceeEEEEeCCC-CCEEEEeeCCCcEEEEeCCCc
Q 002843 829 SKLSCVCWNNYI-KNYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 829 ~~v~~l~wnp~~-~~~laS~~~Dg~V~~WD~~~~ 861 (874)
..|.|++|+|.. +++||+|+.||+|++||+.++
T Consensus 100 ~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 100 ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 789999999953 789999999999999999865
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.2e-08 Score=113.01 Aligned_cols=80 Identities=14% Similarity=0.072 Sum_probs=65.1
Q ss_pred CCCCCCCCeeEEEECCCCCEE-EEecCCCcEEEeeCC--CCCCCCcccccCeeee---cCCCceeEEEEeCCCCCEEEEe
Q 002843 774 EFNNSANVICSISFDRDEDHF-AAAGVSKKIKIFEFN--ALFNDSVDVYYPAVEM---SNRSKLSCVCWNNYIKNYLASA 847 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~d~~~l-AT~g~dk~Ikiwd~~--~~~~~~~~~~~p~~~~---~~~~~v~~l~wnp~~~~~laS~ 847 (874)
...+|.+.|.+++|+|||++| |||+.|++|+|||+. ++ ..+..+ .+...|.+|+|+| ++.+||+|
T Consensus 97 ~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~--------~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~ 167 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK--------NVLKLRKRFCFSKRPNAISIAE-DDTTVIIA 167 (450)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS--------SCEEEEEEEECSSCEEEEEECT-TSSEEEEE
T ss_pred CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC--------ceeeeeecccCCCCceEEEEcC-CCCEEEEE
Confidence 345678999999999999995 999999999999998 54 222333 3457899999999 57899999
Q ss_pred eCCCcEEEEeCCCcc
Q 002843 848 DYDGVVKVCMSCRLS 862 (874)
Q Consensus 848 ~~Dg~V~~WD~~~~~ 862 (874)
++||.|.+||+..++
T Consensus 168 ~~~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 168 DKFGDVYSIDINSIP 182 (450)
T ss_dssp ETTSEEEEEETTSCC
T ss_pred eCCCcEEEEecCCcc
Confidence 999999999998654
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=98.72 E-value=2.6e-08 Score=110.92 Aligned_cols=104 Identities=13% Similarity=-0.015 Sum_probs=71.0
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCC-EEEEecCCCcEEEeeCCCCCCCCc-----cccc-------
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSV-----DVYY------- 820 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~-~lAT~g~dk~Ikiwd~~~~~~~~~-----~~~~------- 820 (874)
..++.|...+...+..+. +|.+.|.+|+|+|++. +||||+.|++|+|||+++...... ..+.
T Consensus 166 ~tv~~Wd~~~~~~~~~~~-----~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~ 240 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAGY-----PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLN 240 (393)
T ss_dssp SEEEEEEEETTEEEEEEE-----ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEE
T ss_pred CeEEEEECCCCceeeeec-----CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecc
Confidence 455666665555554443 2478899999999986 699999999999999987522110 0000
Q ss_pred --Ce----eeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 821 --PA----VEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 821 --p~----~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
+. ....+.+.|.+++|++.++..|++++.|++|++||+..++
T Consensus 241 ~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 241 TLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp SGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----
T ss_pred cccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC
Confidence 00 0113456799999997688999999999999999998653
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=98.71 E-value=5.5e-08 Score=112.39 Aligned_cols=95 Identities=14% Similarity=0.193 Sum_probs=78.3
Q ss_pred hccceeeeeceeEeEEecccCCCCCCC---CeeEEEECCC-CCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee----
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSAN---VICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM---- 825 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~---~V~si~F~~d-~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~---- 825 (874)
+..+++.....+.+.+++ +|.. .|.+++|+|+ |++||||+.|++|+|||+.+. .++..+
T Consensus 183 ~~v~vwd~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~~~ 249 (615)
T 1pgu_A 183 GSVVFYQGPPFKFSASDR-----THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG--------EFLKYIEDDQ 249 (615)
T ss_dssp TEEEEEETTTBEEEEEEC-----SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC--------CEEEECCBTT
T ss_pred CcEEEEeCCCcceeeeec-----ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC--------CEeEEecccc
Confidence 445666666777777776 2366 8999999999 999999999999999999876 344455
Q ss_pred -cCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 826 -SNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 826 -~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
.|...|.+++|+ +..+|++++.||+|++||+.+++.
T Consensus 250 ~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 250 EPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp BCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEE
T ss_pred cccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcE
Confidence 566789999999 588999999999999999997644
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=98.66 E-value=5.3e-08 Score=106.87 Aligned_cols=102 Identities=8% Similarity=0.081 Sum_probs=74.4
Q ss_pred cceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCc---cc---------ccCee
Q 002843 756 CKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSV---DV---------YYPAV 823 (874)
Q Consensus 756 ~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~---~~---------~~p~~ 823 (874)
.+++...+.+.+.+++.| .|...|.+|+|+|||.+|||||.|++|+|||+++...... .. ...+.
T Consensus 220 v~iwd~~~~~~~~~~~~g---~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRG---LDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLC 296 (355)
T ss_dssp EEEEETTTCCEEEEEECT---TCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSE
T ss_pred EEEEECCCCcEEEEEEcC---CCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecccccccccee
Confidence 677777778888888731 2589999999999999999999999999999986421110 00 00000
Q ss_pred e--ec--CCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCc
Q 002843 824 E--MS--NRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 824 ~--~~--~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~ 861 (874)
. +. .......++|+| +.+.|++++.||.+.+|++..+
T Consensus 297 ~~~~~~~~~~~~~~~a~~~-d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 297 NFKLSVDKHVRGCKIAWIS-ESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp EEECCCCTTCCCCEEEESS-SSEEEEEETTTTEEEEEEEEEE
T ss_pred EEEeccCCCCCceEEEEeC-CCCEEEEEeCCCeEEEEEEEcC
Confidence 0 11 122347899999 4779999999999999999754
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=98.64 E-value=1e-07 Score=107.02 Aligned_cols=91 Identities=11% Similarity=0.176 Sum_probs=72.7
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~ 832 (874)
+..+.+...+.+.+.++. +|...|.+++| |+.+|||||.|++|+|||+.++ ..+..+. |...|.
T Consensus 153 g~i~iwd~~~~~~~~~~~-----~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~--------~~~~~~~~h~~~v~ 217 (435)
T 1p22_A 153 NTIKIWDKNTLECKRILT-----GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG--------EMLNTLIHHCEAVL 217 (435)
T ss_dssp SCEEEEESSSCCEEEEEC-----CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC--------CEEEEECCCCSCEE
T ss_pred CeEEEEeCCCCeEEEEEc-----CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC--------cEEEEEcCCCCcEE
Confidence 445555666666666665 45889999999 8899999999999999999976 2333443 567899
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
+++|++ ++||+|+.||+|++||+.+++
T Consensus 218 ~l~~~~---~~l~s~s~dg~i~vwd~~~~~ 244 (435)
T 1p22_A 218 HLRFNN---GMMVTCSKDRSIAVWDMASPT 244 (435)
T ss_dssp EEECCT---TEEEEEETTSCEEEEECSSSS
T ss_pred EEEEcC---CEEEEeeCCCcEEEEeCCCCC
Confidence 999985 499999999999999998764
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=98.61 E-value=1.4e-07 Score=105.79 Aligned_cols=102 Identities=11% Similarity=0.045 Sum_probs=77.3
Q ss_pred hhccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCce
Q 002843 753 DGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKL 831 (874)
Q Consensus 753 ~~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v 831 (874)
++..+.+...+.+.+.+++ +|...|.+++|+ +.+|||||.|++|+|||+.++ .++..+. |.+.|
T Consensus 138 dg~i~vwd~~~~~~~~~~~-----~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~--------~~~~~~~~h~~~v 202 (445)
T 2ovr_B 138 DNTLKVWSAVTGKCLRTLV-----GHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG--------ECIHTLYGHTSTV 202 (445)
T ss_dssp TSCEEEEETTTCCEEEECC-----CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCcEEEEECCCCcEEEEEc-----CCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC--------cEEEEECCCCCcE
Confidence 3455666666777776665 468999999997 679999999999999999876 2333443 55789
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeee
Q 002843 832 SCVCWNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFVF 872 (874)
Q Consensus 832 ~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~ 872 (874)
.|++|++ +.||+|+.||+|++||+.+++. +..+...|.
T Consensus 203 ~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~ 243 (445)
T 2ovr_B 203 RCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 243 (445)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEE
T ss_pred EEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEE
Confidence 9999974 4799999999999999987654 444544443
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=98.60 E-value=1.2e-07 Score=106.49 Aligned_cols=83 Identities=13% Similarity=0.217 Sum_probs=65.9
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKV 855 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~ 855 (874)
+|...|.+++| ||++||||+.|++|+|||+.++ ..+..+. |.+.|.|++| ++++||+|+.||+|++
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~v 197 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL--------ECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRV 197 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC--------CEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCC--------eEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEE
Confidence 45788999988 7999999999999999999875 2233343 5678999999 3669999999999999
Q ss_pred EeCCCccc---eeeeeeeee
Q 002843 856 CMSCRLST---YCFRKKFVF 872 (874)
Q Consensus 856 WD~~~~~~---~~~~~~f~~ 872 (874)
||+.+++. +..+...|.
T Consensus 198 wd~~~~~~~~~~~~h~~~v~ 217 (435)
T 1p22_A 198 WDVNTGEMLNTLIHHCEAVL 217 (435)
T ss_dssp EESSSCCEEEEECCCCSCEE
T ss_pred EECCCCcEEEEEcCCCCcEE
Confidence 99998754 444544443
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=98.54 E-value=2.8e-07 Score=100.80 Aligned_cols=95 Identities=9% Similarity=-0.010 Sum_probs=72.1
Q ss_pred ccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEE-EEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeE
Q 002843 755 LCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHF-AAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSC 833 (874)
Q Consensus 755 l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~l-AT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~ 833 (874)
-.+.+...+.+++.++.+ ...|.+++|+|||+++ ++++.|++|+|||+.++ ..+..+..+..+.+
T Consensus 13 ~v~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~--------~~~~~~~~~~~v~~ 78 (391)
T 1l0q_A 13 NISVIDVTSNKVTATIPV------GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN--------NVIATVPAGSSPQG 78 (391)
T ss_dssp EEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--------EEEEEEECSSSEEE
T ss_pred EEEEEECCCCeEEEEeec------CCCcceEEECCCCCEEEEECCCCCeEEEEECCCC--------eEEEEEECCCCccc
Confidence 345555566677777764 2348999999999985 88889999999999876 23445555668999
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 834 VCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 834 l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
++|+|..+.++++++.|++|.+||+.+++.
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTV 108 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeE
Confidence 999996443445666789999999998754
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=98.50 E-value=3.9e-07 Score=102.19 Aligned_cols=92 Identities=7% Similarity=0.041 Sum_probs=72.2
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~ 832 (874)
+..+++...+.+.+.++. +|...|.+++| +|.+||+|+.|++|+|||+++. .++..+. |...|.
T Consensus 219 g~i~~wd~~~~~~~~~~~-----~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~v~ 283 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLM-----GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE--------TCLHTLQGHTNRVY 283 (445)
T ss_dssp SEEEEEESSSCCEEEEEE-----CCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT--------EEEEEECCCSSCEE
T ss_pred CEEEEEECCCCcEEEEEc-----CCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC--------cEeEEecCCCCceE
Confidence 445555556666666665 35889999999 7899999999999999998875 3444554 557899
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
+++| ++.+|++|+.||+|++||+.+++.
T Consensus 284 ~~~~---~~~~l~~~~~d~~i~i~d~~~~~~ 311 (445)
T 2ovr_B 284 SLQF---DGIHVVSGSLDTSIRVWDVETGNC 311 (445)
T ss_dssp EEEE---CSSEEEEEETTSCEEEEETTTCCE
T ss_pred EEEE---CCCEEEEEeCCCeEEEEECCCCCE
Confidence 9999 466999999999999999987754
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=98.44 E-value=8.1e-07 Score=97.03 Aligned_cols=96 Identities=8% Similarity=0.007 Sum_probs=73.7
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEE-EEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHF-AAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~l-AT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~ 832 (874)
+..+.+...+.+++.++.+ ...|.+++|+|||++| ++++.|++|+|||+.+. ..+..+.++..+.
T Consensus 54 ~~i~v~d~~~~~~~~~~~~------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~--------~~~~~~~~~~~~~ 119 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPA------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN--------TVAGTVKTGKSPL 119 (391)
T ss_dssp TEEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--------EEEEEEECSSSEE
T ss_pred CeEEEEECCCCeEEEEEEC------CCCccceEECCCCCEEEEEECCCCEEEEEECCCC--------eEEEEEeCCCCcc
Confidence 3445566667777777775 2389999999999986 56667899999999975 2344455677899
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
+++|+|..+.++++++.|+.|.+||+.+++.
T Consensus 120 ~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 120 GLALSPDGKKLYVTNNGDKTVSVINTVTKAV 150 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 9999996443448888899999999987654
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=98.43 E-value=3.3e-07 Score=101.66 Aligned_cols=99 Identities=6% Similarity=0.039 Sum_probs=73.7
Q ss_pred ceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEE
Q 002843 757 KYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVC 835 (874)
Q Consensus 757 ~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~ 835 (874)
..+...+.+++..+..+.+.+|...|.+++|+|+|.+|||++.|++|++||+++. .++..+. +...+.+++
T Consensus 147 ~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~ 218 (433)
T 3bws_A 147 DVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL--------AYKATVDLTGKWSKILL 218 (433)
T ss_dssp EEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC--------CEEEEEECSSSSEEEEE
T ss_pred EEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc--------eEEEEEcCCCCCeeEEE
Confidence 3344444555554444445678899999999999999999999999999999875 2333343 456799999
Q ss_pred EeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 836 WNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 836 wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
|+|....++++++.|++|++||+.+++.
T Consensus 219 ~~~~~~~l~~~~~~~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 219 YDPIRDLVYCSNWISEDISVIDRKTKLE 246 (433)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred EcCCCCEEEEEecCCCcEEEEECCCCcE
Confidence 9996443446666899999999987644
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=98.39 E-value=7.2e-07 Score=100.34 Aligned_cols=78 Identities=13% Similarity=0.006 Sum_probs=61.5
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCC---cEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEE-EeeCCCc
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSK---KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLA-SADYDGV 852 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk---~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~la-S~~~Dg~ 852 (874)
+|...|.+++|+|||++||+++.++ +|+|||+.++. +.....+...+.+++|+|+ +..|| +++.||.
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~--------~~~l~~~~~~~~~~~~spd-g~~la~~~~~~g~ 246 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--------VRQVASFPRHNGAPAFSPD-GSKLAFALSKTGS 246 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------EEEEECCSSCEEEEEECTT-SSEEEEEECTTSS
T ss_pred CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc--------EEEeecCCCcccCEEEcCC-CCEEEEEEecCCC
Confidence 4578999999999999999999886 99999999762 1222234567999999995 66666 7777765
Q ss_pred --EEEEeCCCccc
Q 002843 853 --VKVCMSCRLST 863 (874)
Q Consensus 853 --V~~WD~~~~~~ 863 (874)
|.+||+.+++.
T Consensus 247 ~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 247 LNLYVMDLASGQI 259 (415)
T ss_dssp CEEEEEETTTCCE
T ss_pred ceEEEEECCCCCE
Confidence 99999987643
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=98.28 E-value=3.1e-06 Score=93.74 Aligned_cols=91 Identities=11% Similarity=0.040 Sum_probs=69.7
Q ss_pred ccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecC---------------CCcEEEeeCCCCCCCCcccc
Q 002843 755 LCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGV---------------SKKIKIFEFNALFNDSVDVY 819 (874)
Q Consensus 755 l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~---------------dk~Ikiwd~~~~~~~~~~~~ 819 (874)
-.+.+...+.+++..+.+ ...+.+++|+|||++|++++. |++|++||+.++
T Consensus 326 ~v~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~-------- 391 (433)
T 3bws_A 326 KIEVYDLKEKKVQKSIPV------FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD-------- 391 (433)
T ss_dssp EEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT--------
T ss_pred EEEEEECCCCcEEEEecC------CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC--------
Confidence 345555556667777764 567899999999999888776 569999999875
Q ss_pred cCeeeecCCCceeEEEEeCCCCCEEEEeeC-CCcEEEEeCCC
Q 002843 820 YPAVEMSNRSKLSCVCWNNYIKNYLASADY-DGVVKVCMSCR 860 (874)
Q Consensus 820 ~p~~~~~~~~~v~~l~wnp~~~~~laS~~~-Dg~V~~WD~~~ 860 (874)
..+..+.+...+.+++|+|. +.+|++++. |++|++||+..
T Consensus 392 ~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 392 TVKEFWEAGNQPTGLDVSPD-NRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEEEECSSSEEEEEECTT-SCEEEEEETTTTEEEEEEETT
T ss_pred cEEEEecCCCCCceEEEcCC-CCEEEEEECCCCeEEEEEecC
Confidence 23344555677999999995 667777765 99999999863
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=6.7e-06 Score=96.24 Aligned_cols=93 Identities=11% Similarity=0.128 Sum_probs=73.0
Q ss_pred ceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeC--CCCCCCCcccccCeeeecCCCceeEE
Q 002843 757 KYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEF--NALFNDSVDVYYPAVEMSNRSKLSCV 834 (874)
Q Consensus 757 ~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~--~~~~~~~~~~~~p~~~~~~~~~v~~l 834 (874)
..+.-.+.+++.++..| +. +.+++|+|||++|++++.|++|++||+ .++ ..+.++.+.....+|
T Consensus 162 ~v~D~~t~~~~~~i~~g----~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--------~~~~~i~~g~~p~~v 227 (543)
T 1nir_A 162 ALVDGDSKKIVKVIDTG----YA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP--------TKVAEIKIGIEARSV 227 (543)
T ss_dssp EEEETTTCCEEEEEECS----TT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------EEEEEEECCSEEEEE
T ss_pred EEEECCCceEEEEEecC----cc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC--------cEEEEEecCCCcceE
Confidence 44455667788888742 22 889999999999999999999999999 554 234455666778999
Q ss_pred EEeCC---CCCEEEEeeC-CCcEEEEeCCCccc
Q 002843 835 CWNNY---IKNYLASADY-DGVVKVCMSCRLST 863 (874)
Q Consensus 835 ~wnp~---~~~~laS~~~-Dg~V~~WD~~~~~~ 863 (874)
+|+|+ ++.+|+++++ |++|.|||..+++.
T Consensus 228 a~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 228 ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP 260 (543)
T ss_dssp EECCSTTCTTTEEEEEEEESSEEEEEETTTCCE
T ss_pred EeCCCcCCCCCEEEEEEccCCeEEEEecccccc
Confidence 99992 4778999987 89999999987644
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.7e-05 Score=83.70 Aligned_cols=74 Identities=8% Similarity=-0.039 Sum_probs=59.7
Q ss_pred CCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeC
Q 002843 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMS 858 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~ 858 (874)
...+.+++|+|||++|+++ +++|.+||+.+. ..+..+.....+.+++|+|. +.+|++++.|+.|.+||+
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN--------ASIKRVPLPHSYYSVNVSTD-GSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ESEEEEEETTTT--------EEEEEEECSSCCCEEEECTT-SCEEEEESBSSEEEEEET
T ss_pred CCceeeEEECCCCCEEEEe--CCeEEEEECCCC--------cCcceecCCCceeeEEECCC-CCEEEEEcCCCcEEEEEC
Confidence 4678899999999998888 799999999875 22333444556889999995 668888888999999999
Q ss_pred CCccc
Q 002843 859 CRLST 863 (874)
Q Consensus 859 ~~~~~ 863 (874)
.+++.
T Consensus 309 ~~~~~ 313 (337)
T 1pby_B 309 ETLEK 313 (337)
T ss_dssp TTCCE
T ss_pred cCCcE
Confidence 87644
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=97.98 E-value=2e-05 Score=88.46 Aligned_cols=78 Identities=14% Similarity=0.043 Sum_probs=56.6
Q ss_pred CCCCCeeEEEECCCCCEEE-EecCCCc--EEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeC-CC-
Q 002843 777 NSANVICSISFDRDEDHFA-AAGVSKK--IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY-DG- 851 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lA-T~g~dk~--Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~-Dg- 851 (874)
++...|.+++|+|||++|| +++.|+. |.+||+++.. ......+...+.+++|+|+ +.+||+++. +|
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--------~~~l~~~~~~~~~~~~spd-g~~l~~~s~~~g~ 290 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--------IRQVTDGRSNNTEPTWFPD-SQNLAFTSDQAGR 290 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------EEECCCCSSCEEEEEECTT-SSEEEEEECTTSS
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--------EEeCcCCCCcccceEECCC-CCEEEEEECCCCC
Confidence 3467899999999999988 7776655 9999998752 1111234567899999995 667777765 56
Q ss_pred -cEEEEeCCCccc
Q 002843 852 -VVKVCMSCRLST 863 (874)
Q Consensus 852 -~V~~WD~~~~~~ 863 (874)
.|.+||+.+++.
T Consensus 291 ~~i~~~d~~~~~~ 303 (415)
T 2hqs_A 291 PQVYKVNINGGAP 303 (415)
T ss_dssp CEEEEEETTSSCC
T ss_pred cEEEEEECCCCCE
Confidence 566678887643
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=97.95 E-value=2.9e-05 Score=82.23 Aligned_cols=83 Identities=10% Similarity=0.095 Sum_probs=60.2
Q ss_pred eeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCC-CcEEEeeCC--CCCCCCcccccCeeeecCCCceeEEEEeCCC
Q 002843 764 FEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS-KKIKIFEFN--ALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840 (874)
Q Consensus 764 ~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~d-k~Ikiwd~~--~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~ 840 (874)
++++..+.+ ...+.+++|+|||++|++++.+ ++|++||+. ++. ...+..+.....+.+++|+|.
T Consensus 28 ~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~s~d- 94 (343)
T 1ri6_A 28 LTLTQVVDV------PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA------LTFAAESALPGSLTHISTDHQ- 94 (343)
T ss_dssp EEEEEEEEC------SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC------EEEEEEEECSSCCSEEEECTT-
T ss_pred EEEeeeEec------CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc------eeeccccccCCCCcEEEEcCC-
Confidence 344555444 5678899999999998888876 999999997 331 112333444457899999995
Q ss_pred CCEEEEeeC-CCcEEEEeCC
Q 002843 841 KNYLASADY-DGVVKVCMSC 859 (874)
Q Consensus 841 ~~~laS~~~-Dg~V~~WD~~ 859 (874)
+.+|+.+++ |+.|.+||+.
T Consensus 95 g~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 95 GQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp SSEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEEecCCCeEEEEECC
Confidence 666666655 8999999994
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=1.6e-05 Score=83.28 Aligned_cols=68 Identities=15% Similarity=-0.007 Sum_probs=55.2
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT------------------------------------ 347 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs------------------------------------ 347 (874)
+++|||++|.+|.+.+. +......++.++..+|..||+
T Consensus 86 ~lv~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 86 NLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EEEEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEEEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 57999999999988632 223345788999999999999
Q ss_pred -----------------------CCCcccCCCCCceEEecCCcEEEeccccch
Q 002843 348 -----------------------QGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 348 -----------------------~gIIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
..++|+|++|.|||++..+.+.|+||+.+.
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 458999999999999865556799999765
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.89 E-value=3.1e-05 Score=79.52 Aligned_cols=72 Identities=7% Similarity=-0.056 Sum_probs=55.1
Q ss_pred CCCCeeEEEECCCCCEEEEecCCCcEEEeeCCC-CCCCCcccccCeeeecC--CCceeEEEEeCCCCCEEEEee--CCCc
Q 002843 778 SANVICSISFDRDEDHFAAAGVSKKIKIFEFNA-LFNDSVDVYYPAVEMSN--RSKLSCVCWNNYIKNYLASAD--YDGV 852 (874)
Q Consensus 778 ~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~-~~~~~~~~~~p~~~~~~--~~~v~~l~wnp~~~~~laS~~--~Dg~ 852 (874)
|...|.+++|+|||++||+++ +++|.+||+.+ .. +...... ...|.+++|+|. +.+||+++ .|+.
T Consensus 40 ~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~--------~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 40 TPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS--------PEKVDTGFATICNNDHGISPD-GALYAISDKVEFGK 109 (297)
T ss_dssp ESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS--------CEECCCTTCCCBCSCCEECTT-SSEEEEEECTTTSS
T ss_pred CCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC--------ceEeccccccccccceEECCC-CCEEEEEEeCCCCc
Confidence 377899999999999999987 88999999987 52 1112222 256899999994 77899888 4467
Q ss_pred EEEEeCC
Q 002843 853 VKVCMSC 859 (874)
Q Consensus 853 V~~WD~~ 859 (874)
++||++.
T Consensus 110 ~~l~~~~ 116 (297)
T 2ojh_A 110 SAIYLLP 116 (297)
T ss_dssp CEEEEEE
T ss_pred ceEEEEE
Confidence 7777664
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=2.9e-05 Score=97.52 Aligned_cols=78 Identities=12% Similarity=0.066 Sum_probs=63.0
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCCCEEEEeeCCC---
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIKNYLASADYDG--- 851 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~Dg--- 851 (874)
.+|...|.+++|+|||++||+++.+++|++||+.++. ..... .+...|.+++|+| ++.+||+++.++
T Consensus 375 ~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~--------~~~~~~~~~~~v~~~~~Sp-DG~~la~~~~~~~~~ 445 (1045)
T 1k32_A 375 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK--------PTVIERSREAMITDFTISD-NSRFIAYGFPLKHGE 445 (1045)
T ss_dssp CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------EEEEEECSSSCCCCEEECT-TSCEEEEEEEECSST
T ss_pred cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc--------eEEeccCCCCCccceEECC-CCCeEEEEecCcccc
Confidence 3567889999999999999999999999999998762 11222 3456789999999 577888887654
Q ss_pred -------cEEEEeCCCcc
Q 002843 852 -------VVKVCMSCRLS 862 (874)
Q Consensus 852 -------~V~~WD~~~~~ 862 (874)
.|.+||+.+++
T Consensus 446 ~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 446 TDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp TCSCCEEEEEEEETTTTE
T ss_pred ccCCCCCeEEEEECCCCc
Confidence 99999998764
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=97.83 E-value=3.1e-05 Score=81.99 Aligned_cols=86 Identities=5% Similarity=-0.063 Sum_probs=60.9
Q ss_pred ceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEec-CCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCC
Q 002843 763 KFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG-VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIK 841 (874)
Q Consensus 763 ~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g-~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~ 841 (874)
+++.+.++.. ...+.+++|+|||++|++++ .+++|.|||+..+. ...++..+.....+.+++|+|. +
T Consensus 73 ~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~s~d-g 140 (343)
T 1ri6_A 73 ALTFAAESAL------PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL-----PVGVVDVVEGLDGCHSANISPD-N 140 (343)
T ss_dssp CEEEEEEEEC------SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE-----EEEEEEEECCCTTBCCCEECTT-S
T ss_pred ceeecccccc------CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc-----cccccccccCCCCceEEEECCC-C
Confidence 3445555553 22778999999999865555 58899999995220 0123334455667999999995 6
Q ss_pred CEEEEee-CCCcEEEEeCCC
Q 002843 842 NYLASAD-YDGVVKVCMSCR 860 (874)
Q Consensus 842 ~~laS~~-~Dg~V~~WD~~~ 860 (874)
.+|++++ .|+.|.+||+.+
T Consensus 141 ~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 141 RTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp SEEEEEEGGGTEEEEEEECT
T ss_pred CEEEEecCCCCEEEEEEecC
Confidence 6667666 899999999986
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=97.79 E-value=5.1e-05 Score=80.67 Aligned_cols=74 Identities=8% Similarity=0.054 Sum_probs=58.6
Q ss_pred CCCeeEEEECC-CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEe
Q 002843 779 ANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCM 857 (874)
Q Consensus 779 ~~~V~si~F~~-d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD 857 (874)
...+.+++|+| ||++++++ +++|.+||+.+. ..+..+.....+.+++|+|. +.+|++++.|+.|.+||
T Consensus 254 ~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~v~v~d 322 (349)
T 1jmx_B 254 TELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR--------KLIKAANLDHTYYCVAFDKK-GDKLYLGGTFNDLAVFN 322 (349)
T ss_dssp SSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT--------EEEEEEECSSCCCEEEECSS-SSCEEEESBSSEEEEEE
T ss_pred CCcceeeEecCCCCCEEEEE--cCeEEEEECccC--------eEEEEEcCCCCccceEECCC-CCEEEEecCCCeEEEEe
Confidence 56788999999 99999888 889999999875 12223334456789999995 56677788899999999
Q ss_pred CCCccc
Q 002843 858 SCRLST 863 (874)
Q Consensus 858 ~~~~~~ 863 (874)
+.+++.
T Consensus 323 ~~~~~~ 328 (349)
T 1jmx_B 323 PDTLEK 328 (349)
T ss_dssp TTTTEE
T ss_pred ccccce
Confidence 987654
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=97.78 E-value=1.7e-05 Score=85.33 Aligned_cols=71 Identities=10% Similarity=-0.020 Sum_probs=59.7
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT------------------------------------ 347 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs------------------------------------ 347 (874)
.++||+++|.+|.+.... .++..+...++.|++..|..||+
T Consensus 92 ~~vm~~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (304)
T 3sg8_A 92 FAGFTKIKGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGP 168 (304)
T ss_dssp CEEEECCCCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHH
T ss_pred eEEEcccCCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcc
Confidence 568999999999765433 48899999999999999999996
Q ss_pred ----------------------CCCcccCCCCCceEEec--CCcEEEeccccch
Q 002843 348 ----------------------QGVTFLDLKPSSFKLLQ--SNQVKYIGPIIQK 377 (874)
Q Consensus 348 ----------------------~gIIHRDLKPsNILL~~--~~~vKLiDFGlar 377 (874)
..++|+|++|.|||++. .+.+.++||+.+.
T Consensus 169 ~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~ 222 (304)
T 3sg8_A 169 QMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAA 222 (304)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCE
T ss_pred cHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCc
Confidence 13699999999999998 4567899999875
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=97.74 E-value=4.1e-05 Score=91.49 Aligned_cols=81 Identities=9% Similarity=-0.025 Sum_probs=58.2
Q ss_pred CCCeeEEEECCCCCEEEEecC-CC-----cEEEeeCCCCCCCC-cccccCe-------------ee---ecCCCceeEEE
Q 002843 779 ANVICSISFDRDEDHFAAAGV-SK-----KIKIFEFNALFNDS-VDVYYPA-------------VE---MSNRSKLSCVC 835 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~-dk-----~Ikiwd~~~~~~~~-~~~~~p~-------------~~---~~~~~~v~~l~ 835 (874)
...|.+++|+|||++||+++. |+ +|++||+.++.... ...+... .+ +.+...|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 567999999999999999998 88 99999998762111 1111000 00 00002388999
Q ss_pred EeCCCCCEEEEeeCCCcEEEEeCCCc
Q 002843 836 WNNYIKNYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 836 wnp~~~~~laS~~~Dg~V~~WD~~~~ 861 (874)
||| ++.+||+++. +.|.+||+.++
T Consensus 116 ~Sp-Dg~~l~~~~~-~~i~~~d~~~~ 139 (741)
T 2ecf_A 116 WSP-DAQRLLFPLG-GELYLYDLKQE 139 (741)
T ss_dssp ECT-TSSEEEEEET-TEEEEEESSSC
T ss_pred ECC-CCCEEEEEeC-CcEEEEECCCC
Confidence 999 5778888886 99999999876
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=97.74 E-value=2.7e-05 Score=90.64 Aligned_cols=73 Identities=10% Similarity=0.044 Sum_probs=58.5
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCC--cEEEeeCCCCCCCCcccccCeeeec-CCCceeEEE--------EeCCCCCEE
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSK--KIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVC--------WNNYIKNYL 844 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk--~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~--------wnp~~~~~l 844 (874)
.++...+.+++|+|||++||+++.++ +|.+||+.++.. . .+. +...+.+++ |+|+. .++
T Consensus 191 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~ 260 (582)
T 3o4h_A 191 DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV--------E-DLELPSKDFSSYRPTAITWLGYLPDG-RLA 260 (582)
T ss_dssp CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE--------E-ECCCSCSHHHHHCCSEEEEEEECTTS-CEE
T ss_pred ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE--------E-EccCCCcChhhhhhccccceeEcCCC-cEE
Confidence 34578899999999999999999999 999999987621 1 112 233455666 99965 899
Q ss_pred EEeeCCCcEEEEeC
Q 002843 845 ASADYDGVVKVCMS 858 (874)
Q Consensus 845 aS~~~Dg~V~~WD~ 858 (874)
++++.||+++||++
T Consensus 261 ~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 261 VVARREGRSAVFID 274 (582)
T ss_dssp EEEEETTEEEEEET
T ss_pred EEEEcCCcEEEEEE
Confidence 99999999999999
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00018 Score=77.33 Aligned_cols=79 Identities=8% Similarity=0.000 Sum_probs=56.1
Q ss_pred CCCeeEEEECCCCCEE-EEecCCCcEEEeeCCCCCCCCcccccCeeeecC-CCceeEEEEeCCCCCEEEEeeCC-CcEEE
Q 002843 779 ANVICSISFDRDEDHF-AAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSN-RSKLSCVCWNNYIKNYLASADYD-GVVKV 855 (874)
Q Consensus 779 ~~~V~si~F~~d~~~l-AT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~-~~~v~~l~wnp~~~~~laS~~~D-g~V~~ 855 (874)
...+.+++|+|||++| +++..+++|.|||+...- . -..+..+.. ...+.+++|+|+ +.+|++++.+ +.|.+
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g--~---~~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~v~v 312 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG--H---LTLIQQISTEGDFPRDFDLDPT-EAFVVVVNQNTDNATL 312 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG--C---EEEEEEEECSSSCCCEEEECTT-SSEEEEEETTTTEEEE
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC--c---EEEeEEEecCCCCcCeEEECCC-CCEEEEEEcCCCcEEE
Confidence 3678999999999985 677779999999987310 0 012223333 345789999995 6677777764 89999
Q ss_pred E--eCCCccc
Q 002843 856 C--MSCRLST 863 (874)
Q Consensus 856 W--D~~~~~~ 863 (874)
| |..+++.
T Consensus 313 ~~~d~~tg~l 322 (347)
T 3hfq_A 313 YARDLTSGKL 322 (347)
T ss_dssp EEECTTTCCE
T ss_pred EEEeCCCCeE
Confidence 9 5555543
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=97.72 E-value=4.4e-05 Score=84.01 Aligned_cols=72 Identities=10% Similarity=0.026 Sum_probs=59.9
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT----------------------------------- 347 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs----------------------------------- 347 (874)
..++|||++|..|.+.. ...++..+...++.+++..|..||+
T Consensus 116 ~~~vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 116 AFYIMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp CEEEEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred eEEEEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 45799999998885421 1247889999999999999999997
Q ss_pred -----------------------CCCcccCCCCCceEEecCCc--EEEeccccch
Q 002843 348 -----------------------QGVTFLDLKPSSFKLLQSNQ--VKYIGPIIQK 377 (874)
Q Consensus 348 -----------------------~gIIHRDLKPsNILL~~~~~--vKLiDFGlar 377 (874)
..++|+|++|.|||++.++. +.|+||+.+.
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~ 247 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELST 247 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence 35899999999999997753 6899999876
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00011 Score=85.95 Aligned_cols=92 Identities=9% Similarity=0.093 Sum_probs=72.0
Q ss_pred ceeee--eceeEeEEecccCCCCCCCCeeEEEECC----CCCEEEEec-CCCcEEEeeCCCCCCCCcccccCeeeecC--
Q 002843 757 KYARY--SKFEVQGMLRTGEFNNSANVICSISFDR----DEDHFAAAG-VSKKIKIFEFNALFNDSVDVYYPAVEMSN-- 827 (874)
Q Consensus 757 ~~~ry--~~~~~~~~l~~~~~~~~~~~V~si~F~~----d~~~lAT~g-~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~-- 827 (874)
..+.. .++++++++++ ...+.+|+|+| ||++|++++ .+++|+|||..++ .++..+..
T Consensus 203 ~v~D~~~~t~~~~~~i~~------g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~--------~~~~~i~~~g 268 (543)
T 1nir_A 203 DMIDLWAKEPTKVAEIKI------GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL--------EPKQIVSTRG 268 (543)
T ss_dssp EEEETTSSSCEEEEEEEC------CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC--------CEEEEEECCE
T ss_pred EEEECcCCCCcEEEEEec------CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc--------ccceeecccC
Confidence 34444 56788888886 45689999999 999998888 4899999999876 22222221
Q ss_pred ----------CCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 828 ----------RSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 828 ----------~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
...+.++.|+|+++.++++...+|.|.+||+.+.+
T Consensus 269 ~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~ 313 (543)
T 1nir_A 269 MTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID 313 (543)
T ss_dssp ECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSS
T ss_pred cccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCC
Confidence 23789999999888899999999999999998754
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=97.70 E-value=4.3e-05 Score=88.97 Aligned_cols=72 Identities=13% Similarity=-0.087 Sum_probs=58.5
Q ss_pred eEEEECCCCCEEEEecCC----CcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCC--cEEEE
Q 002843 783 CSISFDRDEDHFAAAGVS----KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG--VVKVC 856 (874)
Q Consensus 783 ~si~F~~d~~~lAT~g~d----k~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg--~V~~W 856 (874)
.+++|||||++||+++.+ .+|++||+.++.. .....+...+.+++|+| ++.+||+++.|| .|.+|
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~--------~~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~ 223 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL--------RVFDSGEGSFSSASISP-GMKVTAGLETAREARLVTV 223 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC--------EEECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc--------eEeecCCCccccceECC-CCCEEEEccCCCeeEEEEE
Confidence 799999999999988888 8899999987621 11123456789999999 577899999999 99999
Q ss_pred eCCCccc
Q 002843 857 MSCRLST 863 (874)
Q Consensus 857 D~~~~~~ 863 (874)
|+.+++.
T Consensus 224 d~~~~~~ 230 (582)
T 3o4h_A 224 DPRDGSV 230 (582)
T ss_dssp CTTTCCE
T ss_pred cCCCCcE
Confidence 9987644
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.67 E-value=9.2e-05 Score=75.92 Aligned_cols=80 Identities=6% Similarity=-0.080 Sum_probs=59.2
Q ss_pred CCCCCCeeEEEECCCCCEEEEec-CCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCC---
Q 002843 776 NNSANVICSISFDRDEDHFAAAG-VSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYD--- 850 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g-~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~D--- 850 (874)
..+...|.+++|+|||++||.++ .++.++||++.... ..+..+. +...+.+++|+| ++.+||.++.|
T Consensus 169 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~ 240 (297)
T 2ojh_A 169 THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG-------SSVERITDSAYGDWFPHPSP-SGDKVVFVSYDADV 240 (297)
T ss_dssp CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-------SCEEECCCCSEEEEEEEECT-TSSEEEEEEEETTC
T ss_pred ccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC-------CCcEEEecCCcccCCeEECC-CCCEEEEEEcCCCC
Confidence 34577899999999999877665 59999999987321 1222332 345688999999 47788888776
Q ss_pred --------CcEEEEeCCCccc
Q 002843 851 --------GVVKVCMSCRLST 863 (874)
Q Consensus 851 --------g~V~~WD~~~~~~ 863 (874)
+.|.+||+.+++.
T Consensus 241 ~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 241 FDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp CSCCSSEEEEEEEEETTSCSC
T ss_pred CcccccCceEEEEEecCCCCc
Confidence 5699999987643
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00017 Score=76.10 Aligned_cols=91 Identities=12% Similarity=0.005 Sum_probs=63.8
Q ss_pred eeeceeEeEEecccCCCCCCC-CeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCCCCcccccCeeeecCC------Cce
Q 002843 760 RYSKFEVQGMLRTGEFNNSAN-VICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR------SKL 831 (874)
Q Consensus 760 ry~~~~~~~~l~~~~~~~~~~-~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~------~~v 831 (874)
...+.+++.++..+ +.. .+.+++|+|||++ +++++.+++|.+||+.++. .+..+... ..+
T Consensus 17 d~~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~~ 84 (337)
T 1pby_B 17 DTEKMAVDKVITIA----DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--------TLGRIDLSTPEERVKSL 84 (337)
T ss_dssp ETTTTEEEEEEECT----TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--------EEEEEECCBTTEEEECT
T ss_pred ECCCCcEEEEEEcC----CCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--------eEeeEEcCCcccccccc
Confidence 33455666666642 122 4789999999986 6777888999999998751 12222211 157
Q ss_pred eEEEEeCCCCCEEEEee------------CCCcEEEEeCCCccc
Q 002843 832 SCVCWNNYIKNYLASAD------------YDGVVKVCMSCRLST 863 (874)
Q Consensus 832 ~~l~wnp~~~~~laS~~------------~Dg~V~~WD~~~~~~ 863 (874)
.+++|+|. +.+|++++ .|+.|.+||+.+++.
T Consensus 85 ~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~ 127 (337)
T 1pby_B 85 FGAALSPD-GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR 127 (337)
T ss_dssp TCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE
T ss_pred cceEECCC-CCEEEEEecccccccccccccCceEEEEECCCCcE
Confidence 89999995 66788776 579999999987644
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=97.62 E-value=4.1e-05 Score=91.09 Aligned_cols=73 Identities=5% Similarity=-0.032 Sum_probs=56.8
Q ss_pred CeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCC----ceeEEEEeCCCCCEEEEeeCC------
Q 002843 781 VICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRS----KLSCVCWNNYIKNYLASADYD------ 850 (874)
Q Consensus 781 ~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~----~v~~l~wnp~~~~~laS~~~D------ 850 (874)
.+.+++|+|||+++++ +.|++|++||+.++. ....+.++. .|.+++||| ++.+||+++.|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~--------~~~~~~~~~~~~~~v~~~~~Sp-Dg~~l~~~~~~~~~~~~ 87 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNT--------STVLIEGKKIESLRAIRYEISP-DREYALFSYNVEPIYQH 87 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCC--------CEEEECTTTTTTTTCSEEEECT-TSSEEEEEESCCCCSSS
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCc--------EEEEeccccccccccceEEECC-CCCEEEEEecCccceee
Confidence 4678999999998887 789999999999862 122233332 389999999 57789998764
Q ss_pred ---CcEEEEeCCCccc
Q 002843 851 ---GVVKVCMSCRLST 863 (874)
Q Consensus 851 ---g~V~~WD~~~~~~ 863 (874)
+.|.+||+.+++.
T Consensus 88 ~~~~~i~~~d~~~~~~ 103 (723)
T 1xfd_A 88 SYTGYYVLSKIPHGDP 103 (723)
T ss_dssp CCCSEEEEEESSSCCC
T ss_pred cceeeEEEEECCCCce
Confidence 7788999998754
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.62 E-value=4.9e-05 Score=90.65 Aligned_cols=73 Identities=10% Similarity=0.107 Sum_probs=56.9
Q ss_pred CeeEEEECCCCCEEEEecC---------CCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCC
Q 002843 781 VICSISFDRDEDHFAAAGV---------SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 781 ~V~si~F~~d~~~lAT~g~---------dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
.|.+++|||||++||+++. +++|+|||+.++... +...+ ...+.+++||| ++..||+++ |+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~------~~~~l--~~~~~~~~~SP-DG~~la~~~-~~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFV------RGNEL--PRPIQYLCWSP-VGSKLAYVY-QN 130 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC------CSSCC--CSSBCCEEECS-STTCEEEEE-TT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccc------cceec--CcccccceECC-CCCEEEEEE-CC
Confidence 4889999999999999887 789999999976210 00111 24588999999 477899886 88
Q ss_pred cEEEEeCCCccc
Q 002843 852 VVKVCMSCRLST 863 (874)
Q Consensus 852 ~V~~WD~~~~~~ 863 (874)
.|.+||+.+++.
T Consensus 131 ~i~~~~~~~g~~ 142 (719)
T 1z68_A 131 NIYLKQRPGDPP 142 (719)
T ss_dssp EEEEESSTTSCC
T ss_pred eEEEEeCCCCCc
Confidence 999999987644
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00022 Score=76.54 Aligned_cols=74 Identities=8% Similarity=-0.068 Sum_probs=54.9
Q ss_pred CCCeeEEEECCCCCEEEEec-CCCcEEEeeCCC-CCCCCcccccCeeeecC----------CCceeEEEEeCCCCCEEEE
Q 002843 779 ANVICSISFDRDEDHFAAAG-VSKKIKIFEFNA-LFNDSVDVYYPAVEMSN----------RSKLSCVCWNNYIKNYLAS 846 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g-~dk~Ikiwd~~~-~~~~~~~~~~p~~~~~~----------~~~v~~l~wnp~~~~~laS 846 (874)
...+++|+|+|||++|++++ .+++|+|||+.. +.. .++..+.. ...+.+++|+|+.+ ++++
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~------~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~ 157 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGAL------TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVI 157 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCE------EEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCe------eecceeecCCCCCCccccCCCceEEEECCCCc-EEEE
Confidence 56788999999999988777 789999999963 210 11112211 23488999999655 7777
Q ss_pred eeCCCcEEEEeCC
Q 002843 847 ADYDGVVKVCMSC 859 (874)
Q Consensus 847 ~~~Dg~V~~WD~~ 859 (874)
+..++.|.+||+.
T Consensus 158 ~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 158 DLGSDKVYVYNVS 170 (347)
T ss_dssp ETTTTEEEEEEEC
T ss_pred eCCCCEEEEEEEC
Confidence 7778999999998
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.55 E-value=2.2e-05 Score=81.15 Aligned_cols=66 Identities=12% Similarity=-0.103 Sum_probs=50.8
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---------------------------------
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG--------------------------------- 349 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~g--------------------------------- 349 (874)
.+++|||++|.+|. .. ..+ ...++.+++..|..||+..
T Consensus 90 ~~~v~e~i~G~~l~--~~----~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
T 1nd4_A 90 DWLLLGEVPGQDLL--SS----HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDE 160 (264)
T ss_dssp EEEEEECCSSEETT--TS----CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCG
T ss_pred CEEEEEecCCcccC--cC----cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhh
Confidence 36799999999984 21 122 2356778888888888653
Q ss_pred -------------------------CcccCCCCCceEEecCCcEEEeccccch
Q 002843 350 -------------------------VTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 350 -------------------------IIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
++|+|++|.|||++.++.+.|+||+.+.
T Consensus 161 ~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 161 EHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp GGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred hccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 9999999999999876556799999875
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00029 Score=74.78 Aligned_cols=92 Identities=4% Similarity=-0.114 Sum_probs=63.8
Q ss_pred eeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCCCCcccccCeeeecCC-------C
Q 002843 758 YARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR-------S 829 (874)
Q Consensus 758 ~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~-------~ 829 (874)
.+...+.+++.++..+. ...+.+++|+|||++ +++++.+++|.+||+.+.. .+..+... .
T Consensus 25 ~~d~~~~~~~~~~~~~~----~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~--------~~~~~~~~~~~~~~~~ 92 (349)
T 1jmx_B 25 VVDVASDTVYKSCVMPD----KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK--------NTFHANLSSVPGEVGR 92 (349)
T ss_dssp EEETTTTEEEEEEECSS----CCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE--------EEEEEESCCSTTEEEE
T ss_pred EEECCCCcEEEEEecCC----CCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc--------EEEEEEcccccccccc
Confidence 33444566666665321 224779999999996 5677789999999998751 11222211 2
Q ss_pred ceeEEEEeCCCCCEEEEeeCC------------CcEEEEeCCCcc
Q 002843 830 KLSCVCWNNYIKNYLASADYD------------GVVKVCMSCRLS 862 (874)
Q Consensus 830 ~v~~l~wnp~~~~~laS~~~D------------g~V~~WD~~~~~ 862 (874)
.+.+++|+|+ +.+|++++.+ +.|.+||+.+++
T Consensus 93 ~~~~~~~spd-g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 93 SMYSFAISPD-GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp CSSCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred cccceEECCC-CCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 2789999995 6688888865 999999998743
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00019 Score=76.14 Aligned_cols=79 Identities=13% Similarity=0.017 Sum_probs=58.7
Q ss_pred CCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEE-EEeeCCCcEEEE
Q 002843 779 ANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYL-ASADYDGVVKVC 856 (874)
Q Consensus 779 ~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~l-aS~~~Dg~V~~W 856 (874)
...+.+++|+|||++ ++++..+++|.|||+.+... -.++..+.....+.+++|+|+ +.+| +++..++.|.+|
T Consensus 175 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~-----~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~i~~~ 248 (331)
T 3u4y_A 175 GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN-----ITLLNAVGTNNLPGTIVVSRD-GSTVYVLTESTVDVFNF 248 (331)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS-----CEEEEEEECSSCCCCEEECTT-SSEEEEECSSEEEEEEE
T ss_pred CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc-----cceeeeccCCCCCceEEECCC-CCEEEEEEcCCCEEEEE
Confidence 445789999999996 56667799999999987521 012445555677899999995 5544 555568899999
Q ss_pred eCCCccc
Q 002843 857 MSCRLST 863 (874)
Q Consensus 857 D~~~~~~ 863 (874)
|+.+++.
T Consensus 249 d~~~~~~ 255 (331)
T 3u4y_A 249 NQLSGTL 255 (331)
T ss_dssp ETTTTEE
T ss_pred ECCCCce
Confidence 9987644
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00017 Score=86.16 Aligned_cols=74 Identities=5% Similarity=0.031 Sum_probs=49.7
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCc-ccc-cCeeeec--------CCCceeEEEEeCCCCCEE
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSV-DVY-YPAVEMS--------NRSKLSCVCWNNYIKNYL 844 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~-~~~-~p~~~~~--------~~~~v~~l~wnp~~~~~l 844 (874)
+..+...|.+++|+|||++||+++ +++|.|||+.++....+ ..+ .++. .. ....+.+++||| ++.+|
T Consensus 147 l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l 223 (741)
T 2ecf_A 147 LTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIG-NGIAEFVADEEMDRHTGYWWAP-DDSAI 223 (741)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEE-ESCCCHHHHHHSCCCCSEEECT-TSSCE
T ss_pred cccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcccee-ccccceeeeeccccccceEECC-CCCEE
Confidence 445678899999999999999988 56999999987521111 000 0000 00 001258899999 47788
Q ss_pred EEeeCCC
Q 002843 845 ASADYDG 851 (874)
Q Consensus 845 aS~~~Dg 851 (874)
|+++.|+
T Consensus 224 ~~~~~d~ 230 (741)
T 2ecf_A 224 AYARIDE 230 (741)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 8888776
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0003 Score=74.65 Aligned_cols=74 Identities=4% Similarity=-0.033 Sum_probs=55.8
Q ss_pred CCCeeEEEECCCCCEEEEecCCC---cEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCc-EE
Q 002843 779 ANVICSISFDRDEDHFAAAGVSK---KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV-VK 854 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk---~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~-V~ 854 (874)
..++.+++|+|||++|+++..++ +|.|||+.+. ..+..+.......+++|+|+.+.+++++..++. |.
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~--------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~ 154 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN--------KFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVR 154 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT--------EEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEE
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCC--------CeEEEEECCCCccceEECCCCCEEEEEecCCCceEE
Confidence 45555699999999988665553 9999999875 233344555667899999975556666666788 99
Q ss_pred EEeCCC
Q 002843 855 VCMSCR 860 (874)
Q Consensus 855 ~WD~~~ 860 (874)
+||+..
T Consensus 155 ~~~~~~ 160 (331)
T 3u4y_A 155 RFKIDA 160 (331)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 999875
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00021 Score=84.84 Aligned_cols=75 Identities=8% Similarity=-0.064 Sum_probs=56.7
Q ss_pred CeeEEEECCCCCEEEEecCC---------CcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCC
Q 002843 781 VICSISFDRDEDHFAAAGVS---------KKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYD 850 (874)
Q Consensus 781 ~V~si~F~~d~~~lAT~g~d---------k~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~D 850 (874)
.|.+++|||||++||+++.+ ++|.|||+.++... ++.... +...+.+++||| ++.+||+++.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------~l~~~~~~~~~~~~~~~SP-dG~~la~~~~- 133 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ------SLDPPEVSNAKLQYAGWGP-KGQQLIFIFE- 133 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE------ECCCTTCCSCCCSBCCBCS-STTCEEEEET-
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE------eccCCccccccccccEECC-CCCEEEEEEC-
Confidence 58999999999999999875 67889999876211 111111 223489999999 4778998885
Q ss_pred CcEEEEeCCCccc
Q 002843 851 GVVKVCMSCRLST 863 (874)
Q Consensus 851 g~V~~WD~~~~~~ 863 (874)
+.|.+||+.+++.
T Consensus 134 ~~i~~~~~~~g~~ 146 (723)
T 1xfd_A 134 NNIYYCAHVGKQA 146 (723)
T ss_dssp TEEEEESSSSSCC
T ss_pred CeEEEEECCCCce
Confidence 8999999987644
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0007 Score=73.17 Aligned_cols=80 Identities=13% Similarity=0.045 Sum_probs=54.1
Q ss_pred CCCCeeEEEECCCCCEEEEec-C-CCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEee-CCCcEE
Q 002843 778 SANVICSISFDRDEDHFAAAG-V-SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASAD-YDGVVK 854 (874)
Q Consensus 778 ~~~~V~si~F~~d~~~lAT~g-~-dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~-~Dg~V~ 854 (874)
+...+.+|+|+|||++|++++ . +++|.||++...... -..+..+.....+.+++|+|+ +.+|++++ .++.|.
T Consensus 257 ~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~----~~~~~~~~~g~~~~~~~~spd-g~~l~~~~~~~~~v~ 331 (361)
T 3scy_A 257 NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT----LTKVGYQLTGIHPRNFIITPN-GKYLLVACRDTNVIQ 331 (361)
T ss_dssp CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC----EEEEEEEECSSCCCEEEECTT-SCEEEEEETTTTEEE
T ss_pred CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc----EEEeeEecCCCCCceEEECCC-CCEEEEEECCCCCEE
Confidence 345678999999999875544 4 589999999632100 012223333456789999995 66777777 679999
Q ss_pred EEeC--CCcc
Q 002843 855 VCMS--CRLS 862 (874)
Q Consensus 855 ~WD~--~~~~ 862 (874)
+|++ .+++
T Consensus 332 v~~~d~~~g~ 341 (361)
T 3scy_A 332 IFERDQATGL 341 (361)
T ss_dssp EEEECTTTCC
T ss_pred EEEEECCCCc
Confidence 9644 4553
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.41 E-value=7.7e-05 Score=88.95 Aligned_cols=70 Identities=7% Similarity=0.022 Sum_probs=54.1
Q ss_pred EEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCC----ceeEEEEeCCCCCEEEEeeC---------C
Q 002843 784 SISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRS----KLSCVCWNNYIKNYLASADY---------D 850 (874)
Q Consensus 784 si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~----~v~~l~wnp~~~~~laS~~~---------D 850 (874)
+++|+|||+++++++ |++|++||+.++. +...+.++. .|.+++||| ++.+||+++. |
T Consensus 20 ~~~~s~dg~~~~~~~-d~~i~~~~~~~g~--------~~~~~~~~~~~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~ 89 (719)
T 1z68_A 20 FPNWISGQEYLHQSA-DNNIVLYNIETGQ--------SYTILSNRTMKSVNASNYGLSP-DRQFVYLESDYSKLWRYSYT 89 (719)
T ss_dssp CCEESSSSEEEEECT-TSCEEEEESSSCC--------EEEEECHHHHHTTTCSEEEECT-TSSEEEEEEEEEECSSSCEE
T ss_pred ccEECCCCeEEEEcC-CCCEEEEEcCCCc--------EEEEEccccccccceeeEEECC-CCCeEEEEecCceeEEeecc
Confidence 789999998777764 9999999999862 222222222 388999999 5778888876 7
Q ss_pred CcEEEEeCCCccc
Q 002843 851 GVVKVCMSCRLST 863 (874)
Q Consensus 851 g~V~~WD~~~~~~ 863 (874)
++|.+||+.+++.
T Consensus 90 ~~i~~~d~~~g~~ 102 (719)
T 1z68_A 90 ATYYIYDLSNGEF 102 (719)
T ss_dssp EEEEEEETTTTEE
T ss_pred eEEEEEECCCCcc
Confidence 9999999998755
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00017 Score=86.26 Aligned_cols=78 Identities=6% Similarity=-0.022 Sum_probs=59.0
Q ss_pred CCCCCeeEEEECCCCCEEE-----EecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCC
Q 002843 777 NSANVICSISFDRDEDHFA-----AAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lA-----T~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
+|...|.+++|||||++|| +|+.+.+|+|||+.++.... ..+ + ...+...++|+| ++..|+.+++|.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~-----~-~~~~~~~~~wsp-Dg~~l~~~~~d~ 189 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDV-----I-EGGKYATPKWTP-DSKGFYYEWLPT 189 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCC-----B-SCCTTCCCEECT-TSSEEEEEECCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-Ccc-----c-CcccccceEEec-CCCEEEEEEecC
Confidence 3456799999999999999 77777899999999862110 001 1 122337899999 477999999988
Q ss_pred c-------------EEEEeCCCcc
Q 002843 852 V-------------VKVCMSCRLS 862 (874)
Q Consensus 852 ~-------------V~~WD~~~~~ 862 (874)
. |.+||+.+++
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCG
T ss_pred CCCCccccCCCCCEEEEEECCCCc
Confidence 7 9999999765
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00021 Score=84.84 Aligned_cols=74 Identities=11% Similarity=0.023 Sum_probs=56.6
Q ss_pred CeeEEEECCCCCEEEEec---------------------------------CCCcEEEeeCCCCCCCCcccccCeeee-c
Q 002843 781 VICSISFDRDEDHFAAAG---------------------------------VSKKIKIFEFNALFNDSVDVYYPAVEM-S 826 (874)
Q Consensus 781 ~V~si~F~~d~~~lAT~g---------------------------------~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~ 826 (874)
.+.+++|+|||++||+++ .+.+|.|||+.++.... +... .
T Consensus 182 ~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~------~~~~~~ 255 (706)
T 2z3z_A 182 IEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY------LQTGEP 255 (706)
T ss_dssp CCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE------CCCCSC
T ss_pred CCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe------eccCCC
Confidence 368999999999999998 45789999998752111 1111 2
Q ss_pred CCCceeEEEEeCCCCCEEEEeeCCC-----cEEEEeCCCc
Q 002843 827 NRSKLSCVCWNNYIKNYLASADYDG-----VVKVCMSCRL 861 (874)
Q Consensus 827 ~~~~v~~l~wnp~~~~~laS~~~Dg-----~V~~WD~~~~ 861 (874)
+...|.+++|+| ++.+||+++.|+ .|.+||+.++
T Consensus 256 ~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 256 KEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp TTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred CceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 345689999999 577888888776 9999999987
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0005 Score=73.14 Aligned_cols=87 Identities=6% Similarity=0.055 Sum_probs=61.7
Q ss_pred ceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-----CCCceeEEEEe
Q 002843 763 KFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-----NRSKLSCVCWN 837 (874)
Q Consensus 763 ~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-----~~~~v~~l~wn 837 (874)
+.+++..+. .+...+.+++|+|||++|++++.++.|.+||..+.. .+..+. ....+.+++|+
T Consensus 173 ~~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~s 239 (353)
T 3vgz_A 173 NIKLKTAIQ-----NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK--------ILSRKKLLDDGKEHFFINISLD 239 (353)
T ss_dssp TTEEEEEEC-----CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE--------EEEEEECCCSSSCCCEEEEEEE
T ss_pred CCceEEEec-----CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe--------EEEEEEcCCCCCCcccceEEEC
Confidence 455555555 124557899999999999999999999999998762 111111 23357889999
Q ss_pred CCCCCEEEEee-CCCcEEEEeCCCccc
Q 002843 838 NYIKNYLASAD-YDGVVKVCMSCRLST 863 (874)
Q Consensus 838 p~~~~~laS~~-~Dg~V~~WD~~~~~~ 863 (874)
|. +.+|+.++ .++.|.+||+.+++.
T Consensus 240 ~d-g~~l~~~~~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 240 TA-RQRAFITDSKAAEVLVVDTRNGNI 265 (353)
T ss_dssp TT-TTEEEEEESSSSEEEEEETTTCCE
T ss_pred CC-CCEEEEEeCCCCEEEEEECCCCcE
Confidence 96 55555554 469999999987644
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00013 Score=86.55 Aligned_cols=84 Identities=14% Similarity=-0.016 Sum_probs=57.2
Q ss_pred CCCCeeEEEECCCCCEEEEecCCCcEEEeeCCC-----CCCCCc-ccccC-ee-----eecCCCceeEEEEeCCCCCEEE
Q 002843 778 SANVICSISFDRDEDHFAAAGVSKKIKIFEFNA-----LFNDSV-DVYYP-AV-----EMSNRSKLSCVCWNNYIKNYLA 845 (874)
Q Consensus 778 ~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~-----~~~~~~-~~~~p-~~-----~~~~~~~v~~l~wnp~~~~~la 845 (874)
+...|.+++|+|||++||++ .|++|+|||+.+ +....+ ..+.. +. .-.....+.+++||| ++.+||
T Consensus 119 ~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la 196 (706)
T 2z3z_A 119 TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLA 196 (706)
T ss_dssp CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEE
T ss_pred CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEE
Confidence 35678999999999999995 689999999987 521110 00100 00 000112358999999 577999
Q ss_pred EeeC---------------------------------CCcEEEEeCCCccc
Q 002843 846 SADY---------------------------------DGVVKVCMSCRLST 863 (874)
Q Consensus 846 S~~~---------------------------------Dg~V~~WD~~~~~~ 863 (874)
++++ +..|.+||+.+++.
T Consensus 197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~ 247 (706)
T 2z3z_A 197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT 247 (706)
T ss_dssp EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE
T ss_pred EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce
Confidence 8883 46799999987753
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00064 Score=72.35 Aligned_cols=91 Identities=9% Similarity=0.053 Sum_probs=60.1
Q ss_pred ceeEeEEecccCCCCCCCCeeEEEECCCCCEE-EEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCC
Q 002843 763 KFEVQGMLRTGEFNNSANVICSISFDRDEDHF-AAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIK 841 (874)
Q Consensus 763 ~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~l-AT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~ 841 (874)
+.+++..+..+. .++...+.+++|+|||++| ++...+++|.+||+.+.. .+..+.... -.+++|+|+.+
T Consensus 215 ~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~-~~~~~~s~dg~ 284 (353)
T 3vgz_A 215 DNKILSRKKLLD-DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN--------ILAKVAAPE-SLAVLFNPARN 284 (353)
T ss_dssp TTEEEEEEECCC-SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC--------EEEEEECSS-CCCEEEETTTT
T ss_pred CCeEEEEEEcCC-CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc--------EEEEEEcCC-CceEEECCCCC
Confidence 444555554321 2345678899999999974 455556999999998751 122222222 25799999644
Q ss_pred CEEEEeeCCCcEEEEeCCCccc
Q 002843 842 NYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 842 ~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
.+++++..+++|.+||+.+++.
T Consensus 285 ~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 285 EAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp EEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEEECCCCeEEEEECCCCeE
Confidence 4555555799999999987654
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00031 Score=84.17 Aligned_cols=75 Identities=16% Similarity=0.227 Sum_probs=57.0
Q ss_pred CCCeeEEEECCCCCEEEEecCCC-----cEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCc-
Q 002843 779 ANVICSISFDRDEDHFAAAGVSK-----KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV- 852 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk-----~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~- 852 (874)
...+.+++|||||++||.++.++ +|+|||+.++. .+.......++.+++|+| ++..|+.+++|+.
T Consensus 124 ~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~--------~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~ 194 (710)
T 2xdw_A 124 TVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK--------ELPDVLERVKFSCMAWTH-DGKGMFYNAYPQQD 194 (710)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE--------EEEEEEEEECSCCEEECT-TSSEEEEEECCCCS
T ss_pred CEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------CCcccccCcccceEEEEe-CCCEEEEEEECCcc
Confidence 44688999999999999776544 99999999862 111111223478999999 5778888888877
Q ss_pred ---------------EEEEeCCCcc
Q 002843 853 ---------------VKVCMSCRLS 862 (874)
Q Consensus 853 ---------------V~~WD~~~~~ 862 (874)
|.+||+.+++
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCG
T ss_pred ccccccccccCCCCEEEEEECCCCc
Confidence 9999998865
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00038 Score=75.60 Aligned_cols=74 Identities=11% Similarity=0.040 Sum_probs=54.0
Q ss_pred CeeEEEECCCCCEEEEecC-CCc--EEEeeCCCCCCCCcccccCeeeecCC-CceeEEEEeCCCCCEEEEeeCCCcEEEE
Q 002843 781 VICSISFDRDEDHFAAAGV-SKK--IKIFEFNALFNDSVDVYYPAVEMSNR-SKLSCVCWNNYIKNYLASADYDGVVKVC 856 (874)
Q Consensus 781 ~V~si~F~~d~~~lAT~g~-dk~--Ikiwd~~~~~~~~~~~~~p~~~~~~~-~~v~~l~wnp~~~~~laS~~~Dg~V~~W 856 (874)
.+...+|+|||++||.++. +++ |.+||+.++.. .....++ ..+.+++|+| ++..||.++.++.|.+|
T Consensus 37 ~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~--------~~lt~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~ 107 (388)
T 3pe7_A 37 YFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVA--------TQLTEGRGDNTFGGFLSP-DDDALFYVKDGRNLMRV 107 (388)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEE--------EECCCSSCBCSSSCEECT-TSSEEEEEETTTEEEEE
T ss_pred hhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCce--------EEeeeCCCCCccceEEcC-CCCEEEEEeCCCeEEEE
Confidence 3344899999999999887 663 88889887521 1111122 2344788999 57799999999999999
Q ss_pred eCCCccc
Q 002843 857 MSCRLST 863 (874)
Q Consensus 857 D~~~~~~ 863 (874)
|+.+++.
T Consensus 108 d~~~g~~ 114 (388)
T 3pe7_A 108 DLATLEE 114 (388)
T ss_dssp ETTTCCE
T ss_pred ECCCCcc
Confidence 9998744
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00039 Score=83.81 Aligned_cols=97 Identities=14% Similarity=0.078 Sum_probs=64.8
Q ss_pred ceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCc---------EEEeeCCCCCCCCcccccCeeeecC
Q 002843 757 KYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKK---------IKIFEFNALFNDSVDVYYPAVEMSN 827 (874)
Q Consensus 757 ~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~---------Ikiwd~~~~~~~~~~~~~p~~~~~~ 827 (874)
+.+...+.+....+....+........+++|||||++||.++.+++ |.|||+.++....+ ..+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l--------~~~ 110 (740)
T 4a5s_A 39 LVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITE--------ERI 110 (740)
T ss_dssp EEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS--------SCC
T ss_pred EEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEc--------ccC
Confidence 4444444444444443222222333456899999999999998755 45999998621111 123
Q ss_pred CCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 828 RSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 828 ~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
...+..++||| ++..||.++ |+.|.+||+.+++.
T Consensus 111 ~~~~~~~~~SP-dG~~la~~~-~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 111 PNNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPS 144 (740)
T ss_dssp CTTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCC
T ss_pred CCcceeeEECC-CCCEEEEEE-CCeEEEEECCCCce
Confidence 46789999999 577889885 78999999987643
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0012 Score=71.24 Aligned_cols=82 Identities=13% Similarity=0.079 Sum_probs=55.9
Q ss_pred CCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCC----C-Cccc-ccCeeeecCCCceeEEEEeCCCCCEEEEee-CC
Q 002843 779 ANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFN----D-SVDV-YYPAVEMSNRSKLSCVCWNNYIKNYLASAD-YD 850 (874)
Q Consensus 779 ~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~----~-~~~~-~~p~~~~~~~~~v~~l~wnp~~~~~laS~~-~D 850 (874)
...+.+++|+|||++ ++++..+++|.||++..... . .... ..+...+.......+++|+|+ +.+|+.++ .+
T Consensus 154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~ 232 (361)
T 3scy_A 154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSD-GKFAYLINEIG 232 (361)
T ss_dssp SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTT-SSEEEEEETTT
T ss_pred CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCC-CCEEEEEcCCC
Confidence 345689999999996 45555689999999885421 0 0000 012223344566889999995 66676666 68
Q ss_pred CcEEEEeCCCc
Q 002843 851 GVVKVCMSCRL 861 (874)
Q Consensus 851 g~V~~WD~~~~ 861 (874)
+.|.+||+.++
T Consensus 233 ~~v~v~~~~~g 243 (361)
T 3scy_A 233 GTVIAFRYADG 243 (361)
T ss_dssp CEEEEEEEETT
T ss_pred CeEEEEEecCC
Confidence 99999999855
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00091 Score=72.37 Aligned_cols=92 Identities=8% Similarity=-0.045 Sum_probs=61.4
Q ss_pred ceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecC---CCcEEEeeCCCCCCCCcccccCeeeecCCCce-eEEEEeC
Q 002843 763 KFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGV---SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKL-SCVCWNN 838 (874)
Q Consensus 763 ~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~---dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v-~~l~wnp 838 (874)
+...+..|..+....|...+.+++|+|||++||.++. +..|.+||+.++.. .....+...+ .+++|+|
T Consensus 19 ~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~--------~~l~~~~~~~~~~~~~sp 90 (396)
T 3c5m_A 19 TQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA--------VQLTEGKGDNTFGGFIST 90 (396)
T ss_dssp TCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE--------EECCCSSCBCTTTCEECT
T ss_pred CCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE--------EEeecCCCCccccceECC
Confidence 3344444543333334566889999999999877643 34788899887521 1111122333 3489999
Q ss_pred CCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 839 YIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 839 ~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
++.+||.++.++.|.+||+.+++.
T Consensus 91 -dg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 91 -DERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp -TSSEEEEEETTTEEEEEETTTCCE
T ss_pred -CCCEEEEEEcCCcEEEEECCCCCc
Confidence 578999999999999999987643
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00091 Score=83.89 Aligned_cols=77 Identities=6% Similarity=-0.077 Sum_probs=61.4
Q ss_pred CCCC-CeeEEEECCCCCEEEEecCCCcEE-EeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 777 NSAN-VICSISFDRDEDHFAAAGVSKKIK-IFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 777 ~~~~-~V~si~F~~d~~~lAT~g~dk~Ik-iwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
.|.. .|.+++|+ ||++||+++.+..|. +||+.+... .....+...+.+++|+| ++.+||+++.|+.|.
T Consensus 334 ~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~--------~~l~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~ 403 (1045)
T 1k32_A 334 EPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA--------EKFEENLGNVFAMGVDR-NGKFAVVANDRFEIM 403 (1045)
T ss_dssp CCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE--------EECCCCCCSEEEEEECT-TSSEEEEEETTSEEE
T ss_pred CCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc--------eEecCCccceeeeEECC-CCCEEEEECCCCeEE
Confidence 3455 89999999 999999999888888 899886411 11113346789999999 588999999999999
Q ss_pred EEeCCCccc
Q 002843 855 VCMSCRLST 863 (874)
Q Consensus 855 ~WD~~~~~~ 863 (874)
+||+.+++.
T Consensus 404 ~~d~~tg~~ 412 (1045)
T 1k32_A 404 TVDLETGKP 412 (1045)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCce
Confidence 999988744
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0025 Score=65.72 Aligned_cols=60 Identities=8% Similarity=0.033 Sum_probs=46.1
Q ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCceEEecCCcEEEe
Q 002843 312 GVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYI 371 (874)
Q Consensus 312 GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs-~gIIHRDLKPsNILL~~~~~vKLi 371 (874)
..+|.+.|+..+.+++++++|.+++|.+.+|.-+-. ..-..+=+-|..|+|..+|.|.+.
T Consensus 32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~ 92 (229)
T 2yle_A 32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLA 92 (229)
T ss_dssp EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEEC
T ss_pred cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceecc
Confidence 468999999988899999999999999999877622 111122334688899888888763
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00088 Score=78.83 Aligned_cols=75 Identities=3% Similarity=-0.155 Sum_probs=57.8
Q ss_pred CCCCeeEEEECCCCCEEEEecCC----------CcEEEeeCCC------CCCCCcccccCeeee-cCCCceeEEEEeCCC
Q 002843 778 SANVICSISFDRDEDHFAAAGVS----------KKIKIFEFNA------LFNDSVDVYYPAVEM-SNRSKLSCVCWNNYI 840 (874)
Q Consensus 778 ~~~~V~si~F~~d~~~lAT~g~d----------k~Ikiwd~~~------~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~ 840 (874)
|...+.+++|+|||++||+++.+ .+|.+||+.+ .. +.... .+...+..++||| +
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--------~~~l~~~~~~~~~~~~~Sp-D 198 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA--------VRELSDDAHRFVTGPRLSP-D 198 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG--------SEESSCSCSSEECCCEECT-T
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc--------eeEEEecCCCcccCceECC-C
Confidence 56789999999999999999887 5899999987 31 11112 2345688999999 5
Q ss_pred CCEEEEeeCCC--------cEEEEeCC-Cc
Q 002843 841 KNYLASADYDG--------VVKVCMSC-RL 861 (874)
Q Consensus 841 ~~~laS~~~Dg--------~V~~WD~~-~~ 861 (874)
+.+||.++.|+ .|.+||+. ++
T Consensus 199 G~~la~~~~~~~~~~~~~~~i~~~d~~~~g 228 (662)
T 3azo_A 199 GRQAVWLAWDHPRMPWEGTELKTARVTEDG 228 (662)
T ss_dssp SSEEEEEEECTTCCTTTCEEEEEEEECTTS
T ss_pred CCEEEEEECCCCCCCCCCcEEEEEEECCCC
Confidence 77888777553 79999998 45
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0016 Score=78.45 Aligned_cols=72 Identities=8% Similarity=0.013 Sum_probs=52.9
Q ss_pred CeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCC----ce--eEEEEeCCCCCEEEEeeCC----
Q 002843 781 VICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRS----KL--SCVCWNNYIKNYLASADYD---- 850 (874)
Q Consensus 781 ~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~----~v--~~l~wnp~~~~~laS~~~D---- 850 (874)
...+++|+|||++|+++ |++|++||+.++.. ...+..+. .+ ..++||| ++.+||+++.|
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNS--------SVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQW 86 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCE--------EEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECS
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCce--------EEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeE
Confidence 35689999999999997 99999999998721 11122111 12 4489999 47788888877
Q ss_pred -----CcEEEEeCCCccc
Q 002843 851 -----GVVKVCMSCRLST 863 (874)
Q Consensus 851 -----g~V~~WD~~~~~~ 863 (874)
+.+.+||+.+++.
T Consensus 87 r~~~~~~~~~~d~~~~~~ 104 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQL 104 (740)
T ss_dssp SSCEEEEEEEEETTTTEE
T ss_pred EEccceEEEEEECCCCcE
Confidence 4556999998754
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0017 Score=69.41 Aligned_cols=74 Identities=9% Similarity=0.117 Sum_probs=51.9
Q ss_pred CCeeEEEECCCCCEEEEecCCC-----cEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCC----
Q 002843 780 NVICSISFDRDEDHFAAAGVSK-----KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD---- 850 (874)
Q Consensus 780 ~~V~si~F~~d~~~lAT~g~dk-----~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~D---- 850 (874)
..+.+++|+|||++||.++.+. .|.+||+.++. +........ +.+++|+|+ +..||.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~--------~~~l~~~~~-~~~~~wspd-g~~l~~~~~~~~~~ 128 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS--------SKKILEAKN-IRSLEWNED-SRKLLIVGFKRRED 128 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE--------EEEEEEESE-EEEEEECTT-SSEEEEEEECCCC-
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc--------eEEEEcCCC-ccceeECCC-CCEEEEEEccCCCc
Confidence 4578899999999999887542 37888887651 111112223 899999995 6677776643
Q ss_pred -----------------------CcEEEEeCCCccc
Q 002843 851 -----------------------GVVKVCMSCRLST 863 (874)
Q Consensus 851 -----------------------g~V~~WD~~~~~~ 863 (874)
..|.+||+.+++.
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 129 EDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp --------CCCC---------CEEEEEEEETTTTEE
T ss_pred CCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 5789999987643
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.003 Score=68.87 Aligned_cols=75 Identities=13% Similarity=-0.014 Sum_probs=54.6
Q ss_pred CCCCeeEEEECCCCCEEEEec-CCCcEEEeeCC-CCCCCCcccccCeeeec---CCCceeEEEEeCCCCCEEEEeeC-CC
Q 002843 778 SANVICSISFDRDEDHFAAAG-VSKKIKIFEFN-ALFNDSVDVYYPAVEMS---NRSKLSCVCWNNYIKNYLASADY-DG 851 (874)
Q Consensus 778 ~~~~V~si~F~~d~~~lAT~g-~dk~Ikiwd~~-~~~~~~~~~~~p~~~~~---~~~~v~~l~wnp~~~~~laS~~~-Dg 851 (874)
+...+.+++|+|||++|++++ .+.+|++||+. ++.. .++..+. +...+..++|+|+ +.+|+.++. ++
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~------~~~~~~~~~~~g~~p~~~~~spd-g~~l~v~~~~~~ 215 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV------ELVGSVDAPDPGDHPRWVAMHPT-GNYLYALMEAGN 215 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE------EEEEEEECSSTTCCEEEEEECTT-SSEEEEEETTTT
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE------EEeeeEecCCCCCCCCEeEECCC-CCEEEEEECCCC
Confidence 457799999999999877665 46899999998 5410 1122222 2456899999995 667777765 78
Q ss_pred cEEEEeCC
Q 002843 852 VVKVCMSC 859 (874)
Q Consensus 852 ~V~~WD~~ 859 (874)
+|.+|++.
T Consensus 216 ~v~v~~~~ 223 (365)
T 1jof_A 216 RICEYVID 223 (365)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEe
Confidence 99999875
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0039 Score=68.47 Aligned_cols=67 Identities=12% Similarity=0.153 Sum_probs=50.7
Q ss_pred EEEECCCCCEE-EEec----------CCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCc
Q 002843 784 SISFDRDEDHF-AAAG----------VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 784 si~F~~d~~~l-AT~g----------~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
-++|+||+.++ ++.+ .+.+|.|||+++. ..+..+..+. ..+|+|+|+ +.+|++++. ++
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~--------~~v~~i~~~~-p~~ia~spd-g~~l~v~n~-~~ 326 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK--------QRVARIPGRD-ALSMTIDQQ-RNLMLTLDG-GN 326 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT--------EEEEEEECTT-CCEEEEETT-TTEEEEECS-SC
T ss_pred EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC--------cEEEEEecCC-eeEEEECCC-CCEEEEeCC-Ce
Confidence 37999998874 4433 1458999999876 2344444445 899999995 558888887 99
Q ss_pred EEEEeCCCc
Q 002843 853 VKVCMSCRL 861 (874)
Q Consensus 853 V~~WD~~~~ 861 (874)
|.|||+.++
T Consensus 327 v~v~D~~t~ 335 (361)
T 2oiz_A 327 VNVYDISQP 335 (361)
T ss_dssp EEEEECSSS
T ss_pred EEEEECCCC
Confidence 999999987
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0068 Score=63.03 Aligned_cols=72 Identities=10% Similarity=0.126 Sum_probs=53.4
Q ss_pred CCCeeEEEECCCCCEEEEecCCC-cEEEeeCCCCCCCCcccccCeeeecC---CCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 779 ANVICSISFDRDEDHFAAAGVSK-KIKIFEFNALFNDSVDVYYPAVEMSN---RSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk-~Ikiwd~~~~~~~~~~~~~p~~~~~~---~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
...+.+|+|+|+|.++++...++ +|.+||..... +..+.. ...+.+++|+|. ++++++ +.|++|+
T Consensus 206 ~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~---------~~~~~~~~~~~~~~~i~~~~~-g~l~vs-~~~~~v~ 274 (286)
T 1q7f_A 206 TNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQL---------ISALESKVKHAQCFDVALMDD-GSVVLA-SKDYRLY 274 (286)
T ss_dssp SCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCE---------EEEEEESSCCSCEEEEEEETT-TEEEEE-ETTTEEE
T ss_pred cCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCE---------EEEEcccCCCCcceeEEECCC-CcEEEE-CCCCeEE
Confidence 36788999999999988888786 99999965321 112221 224679999994 667777 6799999
Q ss_pred EEeCCCc
Q 002843 855 VCMSCRL 861 (874)
Q Consensus 855 ~WD~~~~ 861 (874)
+|++...
T Consensus 275 v~~~~~~ 281 (286)
T 1q7f_A 275 IYRYVQL 281 (286)
T ss_dssp EEECSCC
T ss_pred EEEcccc
Confidence 9998754
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0033 Score=69.08 Aligned_cols=86 Identities=10% Similarity=0.081 Sum_probs=61.3
Q ss_pred eceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEec----------CCCcEEEeeCCCCCCCCcccccCeeeec-----
Q 002843 762 SKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG----------VSKKIKIFEFNALFNDSVDVYYPAVEMS----- 826 (874)
Q Consensus 762 ~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g----------~dk~Ikiwd~~~~~~~~~~~~~p~~~~~----- 826 (874)
.++++++++..| ..+ .|+|+|||+++.++. .+.+|.+||..++ .++.++.
T Consensus 39 ~t~~~~~~i~~g-----~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~--------~~~~~i~~~~~~ 103 (361)
T 2oiz_A 39 TNGKFLGMVPTA-----FNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL--------TFEKEISLPPKR 103 (361)
T ss_dssp TTCCEEEEEECC-----EEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC--------CEEEEEEECTTB
T ss_pred CCCeEEEEecCC-----CCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC--------cEEEEEEcCccc
Confidence 456777777642 344 899999999977765 3678999999875 1222222
Q ss_pred --CCCceeEEEEeCCCCCEEEEeeC--CCcEEEEeCCCccc
Q 002843 827 --NRSKLSCVCWNNYIKNYLASADY--DGVVKVCMSCRLST 863 (874)
Q Consensus 827 --~~~~v~~l~wnp~~~~~laS~~~--Dg~V~~WD~~~~~~ 863 (874)
+......++++|+ +.+|+.+++ +++|.+||+.+++.
T Consensus 104 ~~~g~~p~~i~~spd-g~~l~v~n~~~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTD-GKFIVLQNASPATSIGIVDVAKGDY 143 (361)
T ss_dssp CCBCCCGGGEEECTT-SSEEEEEEESSSEEEEEEETTTTEE
T ss_pred cccCCCcceEEECCC-CCEEEEECCCCCCeEEEEECCCCcE
Confidence 1234678999995 668877775 58999999998754
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0022 Score=69.89 Aligned_cols=75 Identities=9% Similarity=-0.002 Sum_probs=52.8
Q ss_pred CeeEEE-ECCCCCEEEEecCCC------cEEEeeCC-CCCCCCcccccCee-eec-CCCceeEEEEeCC--CCCEEEEee
Q 002843 781 VICSIS-FDRDEDHFAAAGVSK------KIKIFEFN-ALFNDSVDVYYPAV-EMS-NRSKLSCVCWNNY--IKNYLASAD 848 (874)
Q Consensus 781 ~V~si~-F~~d~~~lAT~g~dk------~Ikiwd~~-~~~~~~~~~~~p~~-~~~-~~~~v~~l~wnp~--~~~~laS~~ 848 (874)
.+.+|+ |+|||++|++++.+. +|+|||+. ++. . ..+. .+. .......++|+|. ++.+|++++
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~-----~-~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~ 328 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS-----I-EKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITD 328 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC-----E-EEEEEEEECSSCCTTCCCEEECTTCTTEEEEEC
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC-----E-EEeeeeeecCCCCcccceecCCCcCCCEEEEEE
Confidence 689999 999999877665432 89999996 331 0 0111 122 2345678999994 477898888
Q ss_pred CC-CcEEEEeCCCc
Q 002843 849 YD-GVVKVCMSCRL 861 (874)
Q Consensus 849 ~D-g~V~~WD~~~~ 861 (874)
.+ ++|+|||+...
T Consensus 329 ~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 329 DQEGWLEIYRWKDE 342 (365)
T ss_dssp SSSCEEEEEEEETT
T ss_pred cCCCeEEEEEEchh
Confidence 75 89999999754
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.003 Score=74.29 Aligned_cols=79 Identities=6% Similarity=0.021 Sum_probs=55.9
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCC--------cEEEeeCC-CCCCCCcccccCeeeecC-CCceeEEEEeCCCCCEEEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSK--------KIKIFEFN-ALFNDSVDVYYPAVEMSN-RSKLSCVCWNNYIKNYLAS 846 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk--------~Ikiwd~~-~~~~~~~~~~~p~~~~~~-~~~v~~l~wnp~~~~~laS 846 (874)
.+...+.+++|||||++||.++.++ +|.+||+. ++. ...+.....+ ...+.+++|+|+.+ ++++
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~-----~~~~~~l~~~~~~~~~~~~~spdg~-l~~~ 258 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR-----FADTRTLLGGPEEAIAQAEWAPDGS-LIVA 258 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC-----EEEEEEEEEETTBCEEEEEECTTSC-EEEE
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc-----ccccEEeCCCCCceEcceEECCCCe-EEEE
Confidence 4457888999999999999888664 79999998 430 0011111222 46789999999655 9999
Q ss_pred eeCCC--cEEEEeCCCc
Q 002843 847 ADYDG--VVKVCMSCRL 861 (874)
Q Consensus 847 ~~~Dg--~V~~WD~~~~ 861 (874)
++.|| .|.+||+.++
T Consensus 259 ~~~~~~~~l~~~~~~~~ 275 (662)
T 3azo_A 259 TDRTGWWNLHRVDPATG 275 (662)
T ss_dssp ECTTSSCEEEEECTTTC
T ss_pred ECCCCCeEEEEEECCCC
Confidence 99999 5555666444
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.008 Score=63.85 Aligned_cols=76 Identities=11% Similarity=0.002 Sum_probs=58.0
Q ss_pred CCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCC----CcEE
Q 002843 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD----GVVK 854 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~D----g~V~ 854 (874)
...+.+++|+|||.+++++..++.|.+||..+.... .........+.+++|+|. +.+++++..+ +.|.
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~-------~~~~~~~~~~~~i~~~~d-g~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK-------RPFVSHKANPAAIKIHKD-GRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-------EEEECSSSSEEEEEECTT-SCEEEEECTTSSSCCEEE
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE-------EEeeCCCCCcceEEECCC-CcEEEEeCCCCCCCceEE
Confidence 567799999999999999999999999999865110 001123467999999995 6677777666 6899
Q ss_pred EEeCCCcc
Q 002843 855 VCMSCRLS 862 (874)
Q Consensus 855 ~WD~~~~~ 862 (874)
+||..++.
T Consensus 116 ~~d~~~~~ 123 (333)
T 2dg1_A 116 AATENGDN 123 (333)
T ss_dssp EECTTSCS
T ss_pred EEeCCCCE
Confidence 99988653
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0022 Score=77.25 Aligned_cols=73 Identities=11% Similarity=0.045 Sum_probs=53.5
Q ss_pred CCeeEEEECCCCCEEEEecCC-----CcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCc--
Q 002843 780 NVICSISFDRDEDHFAAAGVS-----KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV-- 852 (874)
Q Consensus 780 ~~V~si~F~~d~~~lAT~g~d-----k~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~-- 852 (874)
..+.+++|||||++||.++.+ .+|+|||+.++.. +.......++..++|+|+ ..|+.+++|+.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~--------~~~~~~~~~~~~~~wspD--~~l~~~~~~~~~~ 232 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP--------LADELKWVKFSGLAWLGN--DALLYSRFAEPKE 232 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE--------EEEEEEEEESCCCEESTT--SEEEEEECCCC--
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC--------CCccCCCceeccEEEECC--CEEEEEEecCccc
Confidence 468899999999999887654 5799999998621 111111223578999995 67777777765
Q ss_pred ------------EEEEeCCCcc
Q 002843 853 ------------VKVCMSCRLS 862 (874)
Q Consensus 853 ------------V~~WD~~~~~ 862 (874)
|.+|++.+++
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~ 254 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQ 254 (741)
T ss_dssp ------CCCCCEEEEEETTSCG
T ss_pred ccccccCCCCCEEEEEECCCCc
Confidence 8999998764
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.012 Score=69.06 Aligned_cols=90 Identities=13% Similarity=0.171 Sum_probs=66.2
Q ss_pred eeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCC--CCCCCCcccccCeeeecCCCceeEEEEe
Q 002843 760 RYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFN--ALFNDSVDVYYPAVEMSNRSKLSCVCWN 837 (874)
Q Consensus 760 ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~--~~~~~~~~~~~p~~~~~~~~~v~~l~wn 837 (874)
.-.+.++++++..| ..+..++|+|||+++.+++.|++|.+||+. +. ..+.++.....-..++|+
T Consensus 183 D~~t~~v~~~i~~g------~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~--------~~v~~i~~G~~P~~ia~s 248 (567)
T 1qks_A 183 DGSTYEIKTVLDTG------YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP--------TTVAEIKIGSEARSIETS 248 (567)
T ss_dssp ETTTCCEEEEEECS------SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------CEEEEEECCSEEEEEEEC
T ss_pred ECCCCeEEEEEeCC------CCccceEECCCCCEEEEEcCCCeEEEEECCCCCC--------cEeEEEecCCCCceeEEc
Confidence 34556788888763 346689999999998888999999999996 43 223344444445799999
Q ss_pred C---CCCCEEEEeeC-CCcEEEEeCCCccc
Q 002843 838 N---YIKNYLASADY-DGVVKVCMSCRLST 863 (874)
Q Consensus 838 p---~~~~~laS~~~-Dg~V~~WD~~~~~~ 863 (874)
| .++.+|+.+++ +++|.|||..+.+.
T Consensus 249 ~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 249 KMEGWEDKYAIAGAYWPPQYVIMDGETLEP 278 (567)
T ss_dssp CSTTCTTTEEEEEEEETTEEEEEETTTCCE
T ss_pred cccCCCCCEEEEEEccCCeEEEEECCCCcE
Confidence 4 25667777777 59999999887644
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0077 Score=67.54 Aligned_cols=30 Identities=10% Similarity=0.284 Sum_probs=26.7
Q ss_pred CCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCC
Q 002843 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFNALF 812 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~ 812 (874)
.+ |..|+| |+.+|++| .++.|++||+.+..
T Consensus 88 p~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~ 117 (388)
T 1xip_A 88 PD-VIFVCF--HGDQVLVS-TRNALYSLDLEELS 117 (388)
T ss_dssp TT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTT
T ss_pred CC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhh
Confidence 44 999999 99999998 89999999998764
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0039 Score=67.18 Aligned_cols=72 Identities=14% Similarity=-0.099 Sum_probs=55.4
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC----------------------------------
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ---------------------------------- 348 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~---------------------------------- 348 (874)
.+++|||++|.+|.+..-. .++..+...++.|+...|..||+.
T Consensus 88 ~~~v~e~i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l 164 (306)
T 3tdw_A 88 PFVGYRKVQGQILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLL 164 (306)
T ss_dssp EEEEEECCCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGS
T ss_pred eEEEEeccCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhccccc
Confidence 3579999999999874322 356777777777777777777753
Q ss_pred --------------------------CCcccCCCCCceEEec---CCcE-EEeccccch
Q 002843 349 --------------------------GVTFLDLKPSSFKLLQ---SNQV-KYIGPIIQK 377 (874)
Q Consensus 349 --------------------------gIIHRDLKPsNILL~~---~~~v-KLiDFGlar 377 (874)
.++|+|++|.|||++. ++.+ .|+||+.+.
T Consensus 165 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 165 DESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred chhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 2489999999999987 4554 899999765
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.014 Score=62.81 Aligned_cols=74 Identities=15% Similarity=0.028 Sum_probs=50.4
Q ss_pred CCeeEEEECCCCCEEEEecCC-----CcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEee------
Q 002843 780 NVICSISFDRDEDHFAAAGVS-----KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASAD------ 848 (874)
Q Consensus 780 ~~V~si~F~~d~~~lAT~g~d-----k~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~------ 848 (874)
..|.+++|+|||++||.++.+ ++|.+||+.++... .+..+ .... ++|+|.++.+|++++
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~------~l~~~---~~~~-~~~s~~dg~~l~~~~~~~p~~ 307 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE------EVMVM---PPCS-HLMSNFDGSLMVGDGCDAPVD 307 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE------EEEEC---CSEE-EEEECSSSSEEEEEECCC---
T ss_pred ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeE------EeeeC---CCCC-CCccCCCCceEEEecCCccee
Confidence 358899999999998877654 45999999875211 11111 1233 899993355887755
Q ss_pred ----------CCCcEEEEeCCCccc
Q 002843 849 ----------YDGVVKVCMSCRLST 863 (874)
Q Consensus 849 ----------~Dg~V~~WD~~~~~~ 863 (874)
.++.|.+||+.+++.
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBC
T ss_pred eccccccccCCCCcEEEEecccCce
Confidence 347899999987643
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.012 Score=63.61 Aligned_cols=79 Identities=8% Similarity=-0.020 Sum_probs=53.9
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEE--eCCCCCEEEE--------
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCW--NNYIKNYLAS-------- 846 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~w--np~~~~~laS-------- 846 (874)
++...+.+++|+|||++||.++.++.|.+||+.++... .+.. .+...+....| +| +..+|+.
T Consensus 78 ~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~------~~~~-~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~ 149 (388)
T 3pe7_A 78 GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN------VVYQ-VPAEWVGYGTWVANS-DCTKLVGIEIRREDW 149 (388)
T ss_dssp SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE------EEEE-CCTTEEEEEEEEECT-TSSEEEEEEEEGGGC
T ss_pred CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce------eeee-chhhcccccceeECC-CCCeeccccccCccc
Confidence 34556667899999999999999999999999986211 1111 12233444444 77 4667763
Q ss_pred --------------eeCCCcEEEEeCCCccc
Q 002843 847 --------------ADYDGVVKVCMSCRLST 863 (874)
Q Consensus 847 --------------~~~Dg~V~~WD~~~~~~ 863 (874)
++.+..|.+||+.+++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (388)
T 3pe7_A 150 VPLTDWKKFHEFYFTKPCCRLMRVDLKTGES 180 (388)
T ss_dssp CCCCSHHHHHHHGGGCCCEEEEEEETTTCCE
T ss_pred ccccccchhhhhhccCCcceEEEEECCCCce
Confidence 34567899999998744
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=96.03 E-value=0.023 Score=61.04 Aligned_cols=73 Identities=8% Similarity=-0.076 Sum_probs=55.8
Q ss_pred CCCeeEEEECCCCCEEEEecCCC------------------------cEEEeeCCCCCCCCcccccCeeeec--CCCcee
Q 002843 779 ANVICSISFDRDEDHFAAAGVSK------------------------KIKIFEFNALFNDSVDVYYPAVEMS--NRSKLS 832 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk------------------------~Ikiwd~~~~~~~~~~~~~p~~~~~--~~~~v~ 832 (874)
-+.|.+|+|+|+|+++++++.++ +|.+||..++. .+.... .-....
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~--------~~~~~~~~~~~~p~ 94 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE--------ILQSSGKNLFYLPH 94 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC--------EEEEECTTTCSSEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe--------EEeccCCCccCCce
Confidence 46799999999999999988884 79999987651 111111 123578
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCC
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCR 860 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~ 860 (874)
.|+++|. ++++++...++.|.+||...
T Consensus 95 gia~d~~-g~l~v~d~~~~~v~~~~~~g 121 (329)
T 3fvz_A 95 GLSIDTD-GNYWVTDVALHQVFKLDPHS 121 (329)
T ss_dssp EEEECTT-SCEEEEETTTTEEEEECTTC
T ss_pred EEEECCC-CCEEEEECCCCEEEEEeCCC
Confidence 9999994 66888888899999999864
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=95.99 E-value=0.011 Score=66.40 Aligned_cols=68 Identities=6% Similarity=-0.029 Sum_probs=53.1
Q ss_pred CCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeC
Q 002843 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMS 858 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~ 858 (874)
...|.+|.|.+.. ||+++.|++|.+||+.+... . .....|+|+||||. + ++.|..||+|++|+.
T Consensus 126 ~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~------~-----~~~~~Vs~v~WSpk-G--~~vg~~dg~i~~~~~ 189 (388)
T 1xip_A 126 EKPVFQLKNVNNT--LVILNSVNDLSALDLRTKST------K-----QLAQNVTSFDVTNS-Q--LAVLLKDRSFQSFAW 189 (388)
T ss_dssp SSCEEEEEECSSE--EEEEETTSEEEEEETTTCCE------E-----EEEESEEEEEECSS-E--EEEEETTSCEEEEEE
T ss_pred ecceeeEEecCCC--EEEEECCCCEEEEEccCCcc------c-----cccCCceEEEEcCC-c--eEEEEcCCcEEEEcC
Confidence 4557888887653 99999999999999986521 1 12357999999995 4 788999999999988
Q ss_pred CCcc
Q 002843 859 CRLS 862 (874)
Q Consensus 859 ~~~~ 862 (874)
..+.
T Consensus 190 ~~~~ 193 (388)
T 1xip_A 190 RNGE 193 (388)
T ss_dssp ETTE
T ss_pred CCcc
Confidence 7643
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=95.94 E-value=0.025 Score=58.60 Aligned_cols=71 Identities=8% Similarity=0.133 Sum_probs=55.4
Q ss_pred CCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCC---CceeEEEEeCCCCCEEEEeeCCC-cEE
Q 002843 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR---SKLSCVCWNNYIKNYLASADYDG-VVK 854 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~---~~v~~l~wnp~~~~~laS~~~Dg-~V~ 854 (874)
...+.+|+|+|+|.++++.+.+++|++||.... .+..+... .....|+++|. ++++++...++ .|.
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~---------~~~~~~~~g~~~~p~~i~~d~~-G~l~v~~~~~~~~i~ 232 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ---------YLRQIGGEGITNYPIGVGINSN-GEILIADNHNNFNLT 232 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC---------EEEEESCTTTSCSEEEEEECTT-CCEEEEECSSSCEEE
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC---------EEEEEccCCccCCCcEEEECCC-CCEEEEeCCCCEEEE
Confidence 456899999999999999888999999997542 11222222 45789999994 67888888886 999
Q ss_pred EEeCC
Q 002843 855 VCMSC 859 (874)
Q Consensus 855 ~WD~~ 859 (874)
+||..
T Consensus 233 ~~~~~ 237 (286)
T 1q7f_A 233 IFTQD 237 (286)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 99975
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=95.91 E-value=0.0075 Score=72.21 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=54.3
Q ss_pred CCCCeeEEEECCCCCEEE-----EecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCc
Q 002843 778 SANVICSISFDRDEDHFA-----AAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 778 ~~~~V~si~F~~d~~~lA-----T~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
+...|.+++|||||++|| +|+...+|+|||+.++. .+.......+...++|+ + +..|+.+++|+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~--------~~~~~~~~~k~~~~~Ws-D-g~~l~y~~~~~~ 196 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ--------PLETPLKDVKFSGISWL-G-NEGFFYSSYDKP 196 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS--------EEEEEEEEEESCCCEEE-T-TTEEEEEESSCC
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC--------CCccccCCceeccEEEe-C-CCEEEEEEecCc
Confidence 356888999999999988 45555799999999872 11110111235789999 5 667888888754
Q ss_pred -------------EEEEeCCCcc
Q 002843 853 -------------VKVCMSCRLS 862 (874)
Q Consensus 853 -------------V~~WD~~~~~ 862 (874)
|.+|++.+.+
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~ 219 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQ 219 (693)
T ss_dssp C-------CCCCEEEEEETTSCG
T ss_pred ccccccccCCCcEEEEEECCCCc
Confidence 9999998764
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=95.83 E-value=0.018 Score=60.20 Aligned_cols=73 Identities=4% Similarity=-0.142 Sum_probs=57.6
Q ss_pred CCCeeEEEECCCCC-EEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCCCEEEEeeCCCcEEEE
Q 002843 779 ANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIKNYLASADYDGVVKVC 856 (874)
Q Consensus 779 ~~~V~si~F~~d~~-~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~W 856 (874)
.....+++|+|+|+ +++++..+++|.+||..+. . ..+ .....+.+|+|+| ++.++++...++.|.+|
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~---------~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L---------SPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQ 95 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E---------EEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEE
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e---------EEEECCCCCcceeeECC-CCcEEEEecCCCeEEEE
Confidence 45678999999999 7889999999999998864 1 111 1335688999999 46788887778999999
Q ss_pred eCCCcc
Q 002843 857 MSCRLS 862 (874)
Q Consensus 857 D~~~~~ 862 (874)
|..+++
T Consensus 96 d~~~g~ 101 (296)
T 3e5z_A 96 REPGGE 101 (296)
T ss_dssp CSTTCC
T ss_pred cCCCCc
Confidence 997664
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=95.77 E-value=0.037 Score=59.34 Aligned_cols=77 Identities=10% Similarity=0.114 Sum_probs=57.0
Q ss_pred CCCCCeeEEEECC-CCCEEEEec-CCCcEEEeeCCCCCCCCcccccCeeeecC-----------CCceeEEEEeCCCCCE
Q 002843 777 NSANVICSISFDR-DEDHFAAAG-VSKKIKIFEFNALFNDSVDVYYPAVEMSN-----------RSKLSCVCWNNYIKNY 843 (874)
Q Consensus 777 ~~~~~V~si~F~~-d~~~lAT~g-~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~-----------~~~v~~l~wnp~~~~~ 843 (874)
++-+..++|+|+| +|.++++.+ .+.+|++||..... +..+.. -.....|+++|..+.+
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~---------~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l 210 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKF---------VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQL 210 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCE---------EEEECEECCSSSCCTTEESCEEEEEEETTTTEE
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCE---------EEEeccCCCCCCCCCcccCCCcEEEEECCCCEE
Confidence 4456789999999 889888887 79999999955321 111110 1236899999965778
Q ss_pred EEEeeCCCcEEEEeCCCcc
Q 002843 844 LASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 844 laS~~~Dg~V~~WD~~~~~ 862 (874)
+++...+++|++||..+++
T Consensus 211 ~v~d~~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 211 CVADRENGRIQCFKTDTKE 229 (329)
T ss_dssp EEEETTTTEEEEEETTTCC
T ss_pred EEEECCCCEEEEEECCCCc
Confidence 8888889999999998654
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=95.55 E-value=0.016 Score=60.30 Aligned_cols=70 Identities=11% Similarity=-0.023 Sum_probs=52.7
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC----------------------------------
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ---------------------------------- 348 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~---------------------------------- 348 (874)
..++||+++|.++.+..... ..+...+..++...|.-||..
T Consensus 95 ~~lvme~l~G~~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (272)
T 4gkh_A 95 AWLLTTAIPGKTAFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDD 169 (272)
T ss_dssp EEEEEECCCSEEHHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCG
T ss_pred EEEEEEeeCCccccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccc
Confidence 46799999999998876432 223345667777777777731
Q ss_pred ------------------------CCcccCCCCCceEEecCCcEEEeccccch
Q 002843 349 ------------------------GVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 349 ------------------------gIIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
.++|+|+.|.|||++..+.+-|+||+.+.
T Consensus 170 ~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 170 ERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp GGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 16899999999999877667799998775
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=95.04 E-value=0.085 Score=55.65 Aligned_cols=91 Identities=7% Similarity=-0.090 Sum_probs=64.6
Q ss_pred ceeEeEEec-ccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCC
Q 002843 763 KFEVQGMLR-TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIK 841 (874)
Q Consensus 763 ~~~~~~~l~-~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~ 841 (874)
..+.+.++. .+...++-.....+++.+||.++++.+.+++|.+||.. +. .+-++.......+++..+ ++
T Consensus 107 ~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~--------~~w~~~~~~~~~~~~~~~-~g 176 (276)
T 3no2_A 107 KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ--------LLNSVKLSGTPFSSAFLD-NG 176 (276)
T ss_dssp TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC--------EEEEEECSSCCCEEEECT-TS
T ss_pred CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC--------EEEEEECCCCccceeEcC-CC
Confidence 345555544 22333333456778899999999999999999999987 51 122233334556778887 57
Q ss_pred CEEEEeeCCCcEEEEeCCCccc
Q 002843 842 NYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 842 ~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
++|++++.++.|..+|..+++.
T Consensus 177 ~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 177 DCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp CEEEECBTTSEEEEECTTTCCE
T ss_pred CEEEEeCCCCeEEEEeCcCCcE
Confidence 8999888888999999998766
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=95.04 E-value=0.045 Score=61.25 Aligned_cols=87 Identities=15% Similarity=0.055 Sum_probs=60.3
Q ss_pred eeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEec----------CCCcEEEeeCCCCCCCCcccccCeeeecC---
Q 002843 761 YSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG----------VSKKIKIFEFNALFNDSVDVYYPAVEMSN--- 827 (874)
Q Consensus 761 y~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g----------~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~--- 827 (874)
-.++++++++..| ..+ . |+|+|||+++..+. .+..|.+||..+. .++.++.-
T Consensus 66 ~~t~~v~~~I~vG-----~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~--------~v~~~I~v~~g 130 (386)
T 3sjl_D 66 GEAGRVIGMIDGG-----FLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL--------LPTADIELPDA 130 (386)
T ss_dssp TTTTEEEEEEEEC-----SSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--------CEEEEEEETTC
T ss_pred CCCCeEEEEEECC-----CCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--------eEEEEEECCCc
Confidence 3468889999864 233 4 99999999865544 4678999999986 22222211
Q ss_pred -----CCceeEEEEeCCCCCEEEEeeC--CCcEEEEeCCCccc
Q 002843 828 -----RSKLSCVCWNNYIKNYLASADY--DGVVKVCMSCRLST 863 (874)
Q Consensus 828 -----~~~v~~l~wnp~~~~~laS~~~--Dg~V~~WD~~~~~~ 863 (874)
...-..++++|+ +.+|..+++ +++|.++|+.+++.
T Consensus 131 ~r~~~g~~P~~~a~spD-Gk~lyVan~~~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 131 PRFLVGTYPWMTSLTPD-GKTLLFYQFSPAPAVGVVDLEGKAF 172 (386)
T ss_dssp CCCCBSCCGGGEEECTT-SSEEEEEECSSSCEEEEEETTTTEE
T ss_pred cccccCCCCceEEEcCC-CCEEEEEEcCCCCeEEEEECCCCcE
Confidence 123457999996 556666654 68999999998744
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=95.02 E-value=0.0088 Score=65.23 Aligned_cols=30 Identities=7% Similarity=-0.064 Sum_probs=25.2
Q ss_pred CCCcccCCCCCceEEecCCcEEEeccccch
Q 002843 348 QGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 348 ~gIIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
..++|+|++|.|||++....+.|+||..+.
T Consensus 222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~ 251 (357)
T 3ats_A 222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVA 251 (357)
T ss_dssp CEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred ceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence 468999999999999854447899998775
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=94.79 E-value=0.11 Score=54.13 Aligned_cols=72 Identities=17% Similarity=0.143 Sum_probs=53.7
Q ss_pred CCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCC-EEEEeeCCCcEEEEe
Q 002843 780 NVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKN-YLASADYDGVVKVCM 857 (874)
Q Consensus 780 ~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~-~laS~~~Dg~V~~WD 857 (874)
..+.+|+|+++|.++++...++.|.+||..++. .+..+. ....+.+++|+|+ ++ +.+++..++.|..||
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~--------~~~~~~~~~~~~~~i~~~~d-g~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ--------PKMRIRCPFEKPSNLHFKPQ-TKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS--------CSEEEECSSSCEEEEEECTT-SSEEEEEETTTTEEEEEE
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc--------EeEEEeCCCCCceeEEECCC-CCEEEEEeCCCCeEEEEe
Confidence 567889999999998887778999999988541 111122 2256899999985 55 555666678999999
Q ss_pred CCC
Q 002843 858 SCR 860 (874)
Q Consensus 858 ~~~ 860 (874)
+..
T Consensus 297 ~~~ 299 (314)
T 1pjx_A 297 WQR 299 (314)
T ss_dssp CSS
T ss_pred CCC
Confidence 975
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=94.77 E-value=0.092 Score=54.78 Aligned_cols=74 Identities=11% Similarity=-0.079 Sum_probs=52.5
Q ss_pred CCCeeEEEECCCCCEEEEecCCCcEEEeeCC-CCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEe
Q 002843 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFN-ALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCM 857 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~-~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD 857 (874)
....++|+|+|||++|++.+.+++|.+||+. ++. ......+. -.....+.+++|++. +++++++ ++.|.+||
T Consensus 171 ~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~---~~~~~~~~-~~~~~~p~~i~~d~~-G~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGE---TEYQGVHF-TVEPGKTDGLRVDAG-GLIWASA--GDGVHVLT 243 (296)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSC---EEEEEEEE-CCSSSCCCSEEEBTT-SCEEEEE--TTEEEEEC
T ss_pred CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCc---CcCCCeEe-eCCCCCCCeEEECCC-CCEEEEc--CCeEEEEC
Confidence 4567899999999998888889999999987 321 00000011 112345678999995 6676666 88999999
Q ss_pred CC
Q 002843 858 SC 859 (874)
Q Consensus 858 ~~ 859 (874)
..
T Consensus 244 ~~ 245 (296)
T 3e5z_A 244 PD 245 (296)
T ss_dssp TT
T ss_pred CC
Confidence 87
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=94.67 E-value=0.12 Score=52.59 Aligned_cols=74 Identities=7% Similarity=0.012 Sum_probs=57.1
Q ss_pred CCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCC
Q 002843 780 NVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSC 859 (874)
Q Consensus 780 ~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~ 859 (874)
..+.+|+++++|.++++...+++|.+||..+..... ....+...+.+++++|. ++++++...+++|.+++..
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-------~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-------LPFTGLNTPLAVAVDSD-RTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-------CCCCSCSCEEEEEECTT-CCEEEEEGGGTEEEEECCC
T ss_pred CCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-------eccCCCCCceeEEECCC-CCEEEEECCCCEEEEEcCC
Confidence 668899999999888888889999999987542100 01112356889999995 6788888889999999997
Q ss_pred Cc
Q 002843 860 RL 861 (874)
Q Consensus 860 ~~ 861 (874)
..
T Consensus 264 ~~ 265 (270)
T 1rwi_B 264 EH 265 (270)
T ss_dssp GG
T ss_pred Cc
Confidence 54
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=94.67 E-value=0.068 Score=56.69 Aligned_cols=68 Identities=3% Similarity=-0.156 Sum_probs=51.1
Q ss_pred CCCCeeE-EEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcE-EE
Q 002843 778 SANVICS-ISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV-KV 855 (874)
Q Consensus 778 ~~~~V~s-i~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V-~~ 855 (874)
+...|.+ +.|+ || ++++++.+++++|| +.++ .....+.+...|.+++|+| .++++++.++.. .|
T Consensus 261 ~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g--------~~~~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l 326 (347)
T 2gop_A 261 VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG--------EIKPIAKGRHWIMGFDVDE---IVVYLKETATRLREL 326 (347)
T ss_dssp CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS--------SEEEEECSSSEEEEEEESS---SEEEEEECSSSCCEE
T ss_pred CCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC--------ceEEEecCCCeEEeeeeeC---cEEEEEcCCCChHHh
Confidence 3556776 9999 99 99999999999999 8743 1122234456799999998 577787777765 88
Q ss_pred EeCC
Q 002843 856 CMSC 859 (874)
Q Consensus 856 WD~~ 859 (874)
|.+.
T Consensus 327 ~~~~ 330 (347)
T 2gop_A 327 FTWD 330 (347)
T ss_dssp EEES
T ss_pred eEeC
Confidence 8776
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=94.46 E-value=0.17 Score=56.58 Aligned_cols=95 Identities=11% Similarity=0.105 Sum_probs=64.3
Q ss_pred cceeeeeceeEeEEec-ccCCCC---------CCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee
Q 002843 756 CKYARYSKFEVQGMLR-TGEFNN---------SANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM 825 (874)
Q Consensus 756 ~~~~ry~~~~~~~~l~-~~~~~~---------~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~ 825 (874)
.+| .|.+-.++.||- ++.-.+ .-+...+|+|+|+|.++++...+++|++||..+.. +..+
T Consensus 98 ~~F-~y~~~~~v~tv~G~~~~~~~~dG~~~~a~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~---------~~~~ 167 (409)
T 3hrp_A 98 GTF-KYEQAQNVSTISGSASKDGNDDGDLASAKFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK---------VTTV 167 (409)
T ss_dssp SCE-EECCCEEEEEEEECTTCCSCCCBSTTTCCCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTE---------EEEE
T ss_pred eeE-EEecccEEEEeecccCCCccCCCcHHHcccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCE---------EEEe
Confidence 356 566666676765 422211 12567899999999999998889999999998651 1111
Q ss_pred cCCCceeEEEEeCCCCCEEEEeeCCC--cEEEEeCCCc
Q 002843 826 SNRSKLSCVCWNNYIKNYLASADYDG--VVKVCMSCRL 861 (874)
Q Consensus 826 ~~~~~v~~l~wnp~~~~~laS~~~Dg--~V~~WD~~~~ 861 (874)
.......+++|+|. ...|+++++++ .|.+||...+
T Consensus 168 ~~~~~~~~ia~~~~-g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 168 HPGFKGGKPAVTKD-KQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp EETCCBCBCEECTT-SSEEEEEBSSTTCEEEEEEGGGT
T ss_pred eccCCCCceeEecC-CCcEEEEecCCCceEEEEEcCCC
Confidence 11122223999995 67888888876 7888887644
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=94.42 E-value=0.066 Score=63.78 Aligned_cols=74 Identities=11% Similarity=0.002 Sum_probs=51.1
Q ss_pred eEEEECCCCCEEEEecCCCc-------------EEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEee
Q 002843 783 CSISFDRDEDHFAAAGVSKK-------------IKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASAD 848 (874)
Q Consensus 783 ~si~F~~d~~~lAT~g~dk~-------------Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~ 848 (874)
.+++|+|||+.||.++.|+. |++|++.+..... ..+.+.. +...+.+++|+|+ +.+||.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~----~lv~~~~~~~~~~~~~~~SpD-G~~l~~~~ 245 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD----TVVHERTGDPTTFLQSDLSRD-GKYLFVYI 245 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC----EEEECCCCCTTCEEEEEECTT-SCCEEEEE
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc----eEEEecCCCCEEEEEEEECCC-CCEEEEEE
Confidence 68999999999999999887 9999998762110 0111112 2246889999995 56676666
Q ss_pred CCC----cEEEEeCCCc
Q 002843 849 YDG----VVKVCMSCRL 861 (874)
Q Consensus 849 ~Dg----~V~~WD~~~~ 861 (874)
.++ .|.+||..++
T Consensus 246 ~~~~~~~~l~~~~~~~~ 262 (695)
T 2bkl_A 246 LRGWSENDVYWKRPGEK 262 (695)
T ss_dssp EETTTEEEEEEECTTCS
T ss_pred eCCCCceEEEEEcCCCC
Confidence 655 5666666443
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=94.37 E-value=0.13 Score=55.23 Aligned_cols=91 Identities=11% Similarity=-0.050 Sum_probs=61.0
Q ss_pred ceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCC------c
Q 002843 757 KYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRS------K 830 (874)
Q Consensus 757 ~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~------~ 830 (874)
....-.++++++++.. ......|+|++||..+++...+++|.+||..+.. ....+.... .
T Consensus 67 ~viD~~t~~~~~~i~~------~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~--------~~~~i~~g~~~~~~~~ 132 (328)
T 3dsm_A 67 FAIDINTFKEVGRITG------FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE--------ITGYIECPDMDMESGS 132 (328)
T ss_dssp EEEETTTCCEEEEEEC------CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE--------EEEEEECTTCCTTTCB
T ss_pred EEEECcccEEEEEcCC------CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe--------EEEEEEcCCccccCCC
Confidence 3334456777777753 4567899999999778887689999999999761 111222222 5
Q ss_pred eeEEEEeCCCCCEEEEee-CCCcEEEEeCCCccc
Q 002843 831 LSCVCWNNYIKNYLASAD-YDGVVKVCMSCRLST 863 (874)
Q Consensus 831 v~~l~wnp~~~~~laS~~-~Dg~V~~WD~~~~~~ 863 (874)
...|++. .+.++++.. ++++|.+||..+++.
T Consensus 133 p~~i~~~--~~~lyv~~~~~~~~v~viD~~t~~~ 164 (328)
T 3dsm_A 133 TEQMVQY--GKYVYVNCWSYQNRILKIDTETDKV 164 (328)
T ss_dssp CCCEEEE--TTEEEEEECTTCCEEEEEETTTTEE
T ss_pred cceEEEE--CCEEEEEcCCCCCEEEEEECCCCeE
Confidence 6678882 344444433 589999999987643
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=94.36 E-value=0.067 Score=63.84 Aligned_cols=74 Identities=5% Similarity=0.034 Sum_probs=52.6
Q ss_pred eeEEEECCCCCEEEEecCCCc----------------EEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEE
Q 002843 782 ICSISFDRDEDHFAAAGVSKK----------------IKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYL 844 (874)
Q Consensus 782 V~si~F~~d~~~lAT~g~dk~----------------Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~l 844 (874)
+.+++|+|||+.|+.++.++. |++|++.+..... ..+.+.. +...+..++|+|+ +.+|
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~----~~v~~~~~~~~~~~~~~~SpD-g~~l 247 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED----ILCAEFPDEPKWMGGAELSDD-GRYV 247 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC----EEEECCTTCTTCEEEEEECTT-SCEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc----eEEeccCCCCeEEEEEEEcCC-CCEE
Confidence 678999999999999888876 9999998752110 0111111 2334789999995 6677
Q ss_pred EEeeC-----CCcEEEEeCCC
Q 002843 845 ASADY-----DGVVKVCMSCR 860 (874)
Q Consensus 845 aS~~~-----Dg~V~~WD~~~ 860 (874)
+.++. +..|.+||+.+
T Consensus 248 ~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 248 LLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp EEEEECSSSSCCEEEEEEGGG
T ss_pred EEEEEccCCCccEEEEEECcc
Confidence 66654 56899999976
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=93.99 E-value=0.21 Score=52.67 Aligned_cols=76 Identities=11% Similarity=-0.042 Sum_probs=51.2
Q ss_pred CCCeeEEEECCCCCEEEEecCC----CcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeC-----
Q 002843 779 ANVICSISFDRDEDHFAAAGVS----KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY----- 849 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~d----k~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~----- 849 (874)
.+.|.+|+|+|||.+++++..+ +.|.+||..+...... +........+.+++|+|. +.+++++..
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~-----~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~ 159 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDI-----IEDLSTAYCIDDMVFDSK-GGFYFTDFRGYSTN 159 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEE-----ECSSSSCCCEEEEEECTT-SCEEEEECCCBTTB
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEE-----EccCccCCcccceEECCC-CCEEEEeccccccC
Confidence 5779999999999988887766 7999999887521100 000112346899999995 667776654
Q ss_pred -CCcEEEEeCCC
Q 002843 850 -DGVVKVCMSCR 860 (874)
Q Consensus 850 -Dg~V~~WD~~~ 860 (874)
.+.|..||...
T Consensus 160 ~~~~l~~~~~~~ 171 (333)
T 2dg1_A 160 PLGGVYYVSPDF 171 (333)
T ss_dssp CCEEEEEECTTS
T ss_pred CCceEEEEeCCC
Confidence 24555566554
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=93.86 E-value=0.24 Score=54.64 Aligned_cols=87 Identities=11% Similarity=0.062 Sum_probs=59.1
Q ss_pred eeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEec----------CCCcEEEeeCCCCCCCCcccccCeeeecC--
Q 002843 760 RYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG----------VSKKIKIFEFNALFNDSVDVYYPAVEMSN-- 827 (874)
Q Consensus 760 ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g----------~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~-- 827 (874)
.+.+++++.++..| ... .|+|+|||+++..+. .+.+|-+||..++. ++.++..
T Consensus 53 D~~t~~~~~~i~~g-----~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--------~~~~i~~~~ 117 (373)
T 2mad_H 53 DAGSGSILGHVNGG-----FLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL--------PIADIELPD 117 (373)
T ss_pred ECCCCeEEEEecCC-----CCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc--------EEEEEECCC
Confidence 44578888888754 233 899999999976664 46789999998751 1111111
Q ss_pred ------CCceeEEEEeCCCCCEEEEeeC--CCcEEEEeCCCccc
Q 002843 828 ------RSKLSCVCWNNYIKNYLASADY--DGVVKVCMSCRLST 863 (874)
Q Consensus 828 ------~~~v~~l~wnp~~~~~laS~~~--Dg~V~~WD~~~~~~ 863 (874)
...-..++|+|+ +.+|+.++. ++.|.++| .+++.
T Consensus 118 ~~~~~~g~~p~~~~~spD-G~~l~v~n~~~~~~v~viD-~t~~~ 159 (373)
T 2mad_H 118 APRFDVGPYSWMNANTPN-NADLLFFQFAAGPAVGLVV-QGGSS 159 (373)
T ss_pred ccccccCCCccceEECCC-CCEEEEEecCCCCeEEEEE-CCCCE
Confidence 112348999995 556666664 58899999 87644
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=93.83 E-value=0.16 Score=56.09 Aligned_cols=74 Identities=7% Similarity=-0.023 Sum_probs=53.5
Q ss_pred eeEEEECCCCCEE-EEec---------CCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeC-C
Q 002843 782 ICSISFDRDEDHF-AAAG---------VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY-D 850 (874)
Q Consensus 782 V~si~F~~d~~~l-AT~g---------~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~-D 850 (874)
..-++|+||+.++ ++.. .+++|-|+|.++. ..+..+.......+++|+|+.+.+|+++.+ +
T Consensus 269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~--------~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~ 340 (373)
T 2mad_H 269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG--------QTSSQISLGHDVDAISVAQDGGPDLYALSAGT 340 (373)
T ss_pred eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC--------EEEEEEECCCCcCeEEECCCCCeEEEEEcCCC
Confidence 4568899999973 3332 2468999999876 233334434457899999965548888885 9
Q ss_pred CcEEEEeCCCccc
Q 002843 851 GVVKVCMSCRLST 863 (874)
Q Consensus 851 g~V~~WD~~~~~~ 863 (874)
++|.|||+.+++.
T Consensus 341 ~~V~ViD~~t~~v 353 (373)
T 2mad_H 341 EVLHIYDAGAGDQ 353 (373)
T ss_pred CeEEEEECCCCCE
Confidence 9999999998754
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=93.44 E-value=0.22 Score=50.54 Aligned_cols=74 Identities=5% Similarity=0.012 Sum_probs=55.7
Q ss_pred CCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCC
Q 002843 780 NVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSC 859 (874)
Q Consensus 780 ~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~ 859 (874)
..+.+|+|+|+|.++++...++.|.+||..+..... ....+...+.+|+++|. +.++++...++.|.+||..
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-------~~~~~~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-------LPFTDITAPWGIAVDEA-GTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE-------CCCSSCCSEEEEEECTT-CCEEEEETTTSCEEEECTT
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe-------ecccCCCCceEEEECCC-CCEEEEECCCCcEEEEcCC
Confidence 467899999999998888888999999988642100 00112256789999995 5788877778999999997
Q ss_pred Cc
Q 002843 860 RL 861 (874)
Q Consensus 860 ~~ 861 (874)
..
T Consensus 222 ~~ 223 (270)
T 1rwi_B 222 ST 223 (270)
T ss_dssp CS
T ss_pred CC
Confidence 54
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=93.44 E-value=0.083 Score=56.97 Aligned_cols=30 Identities=17% Similarity=0.062 Sum_probs=26.2
Q ss_pred CCCcccCCCCCceEEecC----CcEEEeccccch
Q 002843 348 QGVTFLDLKPSSFKLLQS----NQVKYIGPIIQK 377 (874)
Q Consensus 348 ~gIIHRDLKPsNILL~~~----~~vKLiDFGlar 377 (874)
..++|+|+.|.|||++.+ +.+.|+||+.+.
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~ 216 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK 216 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence 368999999999999874 679999999775
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=93.37 E-value=0.08 Score=56.60 Aligned_cols=30 Identities=13% Similarity=0.012 Sum_probs=27.2
Q ss_pred CCCcccCCCCCceEEecCCcEEEeccccch
Q 002843 348 QGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 348 ~gIIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
..++|+|++|.|||++.++.+.|+||+.+.
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 579999999999999888899999999764
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=93.30 E-value=0.26 Score=52.77 Aligned_cols=85 Identities=12% Similarity=-0.040 Sum_probs=56.5
Q ss_pred ceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCC----------CcEEEeeCCCCCCCCcccccCeeeecCCCcee
Q 002843 763 KFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS----------KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLS 832 (874)
Q Consensus 763 ~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~d----------k~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~ 832 (874)
+.+++.++..+ .....|+|+|||++++++..+ .+|.+||..+.. +.. ...+.......
T Consensus 161 t~~~~~~i~~g------~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~-----v~~-~~~~~~g~~p~ 228 (328)
T 3dsm_A 161 TDKVVDELTIG------IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT-----VEK-QFKFKLGDWPS 228 (328)
T ss_dssp TTEEEEEEECS------SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE-----EEE-EEECCTTCCCE
T ss_pred CCeEEEEEEcC------CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe-----EEE-EEecCCCCCce
Confidence 45566666532 234689999999987777654 799999998751 000 01111123578
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
.++|+|+ ...|..++. .|.+||+.+++
T Consensus 229 ~la~~~d-~~~lyv~~~--~v~~~d~~t~~ 255 (328)
T 3dsm_A 229 EVQLNGT-RDTLYWINN--DIWRMPVEADR 255 (328)
T ss_dssp EEEECTT-SCEEEEESS--SEEEEETTCSS
T ss_pred eEEEecC-CCEEEEEcc--EEEEEECCCCc
Confidence 9999995 556666554 89999998764
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=92.85 E-value=0.11 Score=57.55 Aligned_cols=87 Identities=8% Similarity=-0.012 Sum_probs=60.9
Q ss_pred eeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEec----------CCCcEEEeeCCCCCCCCcccccCeeeecC
Q 002843 758 YARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG----------VSKKIKIFEFNALFNDSVDVYYPAVEMSN 827 (874)
Q Consensus 758 ~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g----------~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~ 827 (874)
+.--.++++++++.-| ..+ .|+|+|||+++..+. .+.+|.+||..+. .++.++.-
T Consensus 50 vID~~t~~v~~~i~vG-----~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~--------~vv~~I~v 114 (368)
T 1mda_H 50 VSCAGCGVTLGHSLGA-----FLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF--------LPIADIEL 114 (368)
T ss_dssp EEETTTTEEEEEEEEC-----TTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC--------CEEEEEEE
T ss_pred EEECCCCeEEEEEeCC-----CCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--------CEEEEEEC
Confidence 3345678899999864 234 699999999866664 4789999999986 22333321
Q ss_pred C--------CceeEEEEeCCCCCEEEEeeC--CCcEEE--EeCCC
Q 002843 828 R--------SKLSCVCWNNYIKNYLASADY--DGVVKV--CMSCR 860 (874)
Q Consensus 828 ~--------~~v~~l~wnp~~~~~laS~~~--Dg~V~~--WD~~~ 860 (874)
. ..-..++++|+ +.+|+.+++ +..|.+ ||+.+
T Consensus 115 ~~~~~~~~g~~P~~ia~SpD-Gk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 115 PDAPRFSVGPRVHIIGNCAS-SACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp TTSCSCCBSCCTTSEEECTT-SSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCccccccCCCcceEEEcCC-CCEEEEEccCCCCeEEEEEEchhh
Confidence 1 22458999996 556766665 467999 99976
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=92.75 E-value=0.21 Score=52.65 Aligned_cols=63 Identities=13% Similarity=0.006 Sum_probs=47.1
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCC--CceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 789 RDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR--SKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 789 ~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~--~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
..+++|++++.|++|.+||.+++. .+-++..+ ..+.++++.| ++++|+ ++++.|..||. +++.
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~--------~~w~~~~~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~ 67 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKE--------IVWEYPLEKGWECNSVAATK-AGEILF--SYSKGAKMITR-DGRE 67 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTE--------EEEEEECCTTCCCCEEEECT-TSCEEE--ECBSEEEEECT-TSCE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCe--------EEEEeCCCccCCCcCeEECC-CCCEEE--eCCCCEEEECC-CCCE
Confidence 356889999999999999998761 22233322 3588999999 578999 45788999998 5654
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=92.44 E-value=0.22 Score=55.15 Aligned_cols=71 Identities=6% Similarity=-0.094 Sum_probs=49.2
Q ss_pred EEECCCCCEEE-Eec---C-----CCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEee-CCCcEE
Q 002843 785 ISFDRDEDHFA-AAG---V-----SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASAD-YDGVVK 854 (874)
Q Consensus 785 i~F~~d~~~lA-T~g---~-----dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~-~Dg~V~ 854 (874)
++|+|||+++- +.. . +..+.|||+++.. .+..+.......+++|+|+.+..+++.. .+++|.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~--------vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~Vs 340 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ--------TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLD 340 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC--------EEECCEEEEEECEEEECCSSSCEEEEEETTTTEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe--------EEEEEECCCCcceEEECCCCCEEEEEccCCCCeEE
Confidence 78999999743 322 1 2345599999861 1222222234679999997667788888 599999
Q ss_pred EEeCCCccc
Q 002843 855 VCMSCRLST 863 (874)
Q Consensus 855 ~WD~~~~~~ 863 (874)
+||+.+++.
T Consensus 341 VID~~t~kv 349 (368)
T 1mda_H 341 IYDAASDQD 349 (368)
T ss_dssp EEESSSCEE
T ss_pred EEECCCCcE
Confidence 999998754
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=91.84 E-value=0.2 Score=53.22 Aligned_cols=28 Identities=7% Similarity=-0.095 Sum_probs=24.2
Q ss_pred CCcccCCCCCceEEecCCcEEEeccccch
Q 002843 349 GVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 349 gIIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
.++|+|+.|.||| ..++.+.++||..+.
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~ 201 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSG 201 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence 3799999999999 667789999998765
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=91.83 E-value=0.42 Score=51.47 Aligned_cols=84 Identities=7% Similarity=-0.113 Sum_probs=56.0
Q ss_pred CCCCCeeEEEECCCCCEEEEecC-----CCcEEEeeCCCCC-CCCcccccCeeeecCCCceeEEEEeCCCCCEEEEee--
Q 002843 777 NSANVICSISFDRDEDHFAAAGV-----SKKIKIFEFNALF-NDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASAD-- 848 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~-----dk~Ikiwd~~~~~-~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~-- 848 (874)
++...+.+|+|+|+|.++++... +.+|.+||+.++. ........+. ....+.+..|+++|..+.+.++..
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~--~~~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPI--TLSNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTT--SCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhh--cccccccceEEEecCCCEEEEEcCcc
Confidence 45678999999999998766433 6899999998752 1111111000 112245789999986555555554
Q ss_pred -CCCcEEEEeCCCcc
Q 002843 849 -YDGVVKVCMSCRLS 862 (874)
Q Consensus 849 -~Dg~V~~WD~~~~~ 862 (874)
.++.|.+||+.+++
T Consensus 142 ~~~~~i~v~d~~~g~ 156 (343)
T 2qe8_A 142 DDKAALIRVDLQTGL 156 (343)
T ss_dssp GGGCEEEEEETTTCC
T ss_pred CCCCeEEEEECCCCC
Confidence 68899999998654
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=91.76 E-value=0.68 Score=47.30 Aligned_cols=74 Identities=8% Similarity=0.056 Sum_probs=55.0
Q ss_pred CCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEe
Q 002843 778 SANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCM 857 (874)
Q Consensus 778 ~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD 857 (874)
+.+.+.+|+++++|.++++...++.|.+||.. ..-. .++. ......+.+|++++ ++.++++...++.|..||
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~----~~~~--~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~ 84 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT----EYPL--PTPDAKVMCLTISS-DGEVWFTENAANKIGRIT 84 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE----EEEC--SSTTCCEEEEEECT-TSCEEEEETTTTEEEEEC
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE----EecC--CcccCceeeEEECC-CCCEEEeCCCCCeEEEEC
Confidence 45789999999999998877778999999987 3100 0000 01235689999998 467777777789999999
Q ss_pred CC
Q 002843 858 SC 859 (874)
Q Consensus 858 ~~ 859 (874)
..
T Consensus 85 ~~ 86 (299)
T 2z2n_A 85 KK 86 (299)
T ss_dssp TT
T ss_pred CC
Confidence 86
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=91.71 E-value=0.39 Score=53.06 Aligned_cols=29 Identities=21% Similarity=0.180 Sum_probs=24.8
Q ss_pred CCCcccCCCCCceEEecCCcEEEeccccch
Q 002843 348 QGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 348 ~gIIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
..++|+|+.|.|||++.+ .++++||..+.
T Consensus 227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a~ 255 (397)
T 2olc_A 227 ETLIHGDLHTGSIFASEH-ETKVIDPEFAF 255 (397)
T ss_dssp CEEECSCCSGGGEEECSS-CEEECCCTTCE
T ss_pred CceeeCCCCcCcEEEeCC-CeEEEeCcccc
Confidence 468999999999999765 48999997765
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=91.69 E-value=0.34 Score=56.76 Aligned_cols=64 Identities=11% Similarity=0.044 Sum_probs=51.2
Q ss_pred ECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCC
Q 002843 787 FDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSC 859 (874)
Q Consensus 787 F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~ 859 (874)
.||.+.++++.+.+++|.|||..+. ..+..+.....+.++.++| ++.+|..++.|+.|.+||+.
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~--------~v~~~i~~g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTY--------EIKTVLDTGYAVHISRLSA-SGRYLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTC--------CEEEEEECSSCEEEEEECT-TSCEEEEEETTSEEEEEETT
T ss_pred cCCCceEEEEeCCCCeEEEEECCCC--------eEEEEEeCCCCccceEECC-CCCEEEEEcCCCeEEEEECC
Confidence 4566677999999999999999876 2333444455677999999 57788888999999999995
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=91.48 E-value=0.42 Score=49.59 Aligned_cols=79 Identities=8% Similarity=-0.023 Sum_probs=51.2
Q ss_pred CCCeeEEEECCCCCEEEE-------ecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCC
Q 002843 779 ANVICSISFDRDEDHFAA-------AGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT-------~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
-....+++|+++|.++++ +..++.|.+||..++...... .|- .-.....+.+++|+|..+.+++++ .++
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~--~~~-~~~~~~~~~~i~~~~~~g~l~v~~-~~~ 92 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC--KPE-VNGYGGIPAGCQCDRDANQLFVAD-MRL 92 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEE--CCE-ETTEECCEEEEEECSSSSEEEEEE-TTT
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEE--ecc-cCCCCCCCceEEEecCCCcEEEEE-CCC
Confidence 345679999999999888 777899999998765211000 000 000225688999998425444444 344
Q ss_pred cEEEEeCCCcc
Q 002843 852 VVKVCMSCRLS 862 (874)
Q Consensus 852 ~V~~WD~~~~~ 862 (874)
.|.+||.. ++
T Consensus 93 ~l~~~d~~-g~ 102 (314)
T 1pjx_A 93 GLLVVQTD-GT 102 (314)
T ss_dssp EEEEEETT-SC
T ss_pred CEEEEeCC-CC
Confidence 78899987 53
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=90.82 E-value=0.7 Score=48.45 Aligned_cols=80 Identities=8% Similarity=0.092 Sum_probs=55.1
Q ss_pred CCeeEEEECCCCCE-EEEecCCCcEEEeeCC--CCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEE
Q 002843 780 NVICSISFDRDEDH-FAAAGVSKKIKIFEFN--ALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKV 855 (874)
Q Consensus 780 ~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~--~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~ 855 (874)
...+.|+|+|||++ +++.+.+++|.+||+. ++.. .....+..+. .......+++.+. +++.++...++.|.+
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~---~~~~~~~~~~~~~~~p~g~~~d~~-G~lwva~~~~~~v~~ 224 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI---SNRRSVYKLEKEEQIPDGMCIDAE-GKLWVACYNGGRVIR 224 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCE---EEEEEEEECCGGGCEEEEEEEBTT-SCEEEEEETTTEEEE
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcc---cCcEEEEECCCCCCCCCeeEECCC-CCEEEEEcCCCEEEE
Confidence 45679999999996 5777888999999984 3310 0001122222 2245789999985 677777777889999
Q ss_pred EeCCCccc
Q 002843 856 CMSCRLST 863 (874)
Q Consensus 856 WD~~~~~~ 863 (874)
||..+++.
T Consensus 225 ~d~~tG~~ 232 (297)
T 3g4e_A 225 LDPVTGKR 232 (297)
T ss_dssp ECTTTCCE
T ss_pred EcCCCceE
Confidence 99986643
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=90.74 E-value=0.72 Score=48.48 Aligned_cols=73 Identities=5% Similarity=-0.089 Sum_probs=49.1
Q ss_pred CCCeeEEEECCCCCEEEE----ecC-------------CCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCC
Q 002843 779 ANVICSISFDRDEDHFAA----AGV-------------SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIK 841 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT----~g~-------------dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~ 841 (874)
.+.+++|+|+|||.+++| |.. ...|..||..++.-. .. . .......++|+|+ +
T Consensus 130 ~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~-------~~-~-~~~~p~gl~~spd-g 199 (305)
T 3dr2_A 130 LNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ-------RM-A-DLDHPNGLAFSPD-E 199 (305)
T ss_dssp CSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE-------EE-E-EESSEEEEEECTT-S
T ss_pred cCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE-------EE-e-cCCCCcceEEcCC-C
Confidence 356789999999999887 442 246777776554100 00 1 2234578999995 6
Q ss_pred CEEEEeeCC------CcEEEEeCCCc
Q 002843 842 NYLASADYD------GVVKVCMSCRL 861 (874)
Q Consensus 842 ~~laS~~~D------g~V~~WD~~~~ 861 (874)
..|..++.+ +.|.+||+...
T Consensus 200 ~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 200 QTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp SEEEEEECCC---CCCEEEEEEEETT
T ss_pred CEEEEEecCCcCCCCCEEEEEEecCC
Confidence 666666665 78999998754
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=90.56 E-value=0.5 Score=56.67 Aligned_cols=73 Identities=7% Similarity=0.100 Sum_probs=49.9
Q ss_pred eEEEECCCCCEEEEecCCCc--------------EEEeeCCCCCCCCcccccCeeeecCC-CceeEEEEeCCCCCEEEEe
Q 002843 783 CSISFDRDEDHFAAAGVSKK--------------IKIFEFNALFNDSVDVYYPAVEMSNR-SKLSCVCWNNYIKNYLASA 847 (874)
Q Consensus 783 ~si~F~~d~~~lAT~g~dk~--------------Ikiwd~~~~~~~~~~~~~p~~~~~~~-~~v~~l~wnp~~~~~laS~ 847 (874)
.+++|+|| +.|+.++.++. |++|++.+..... ..+.+...+ ..+.+++|+|+ +.+||.+
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~----~lv~~~~~~~~~~~~~~~SpD-G~~l~~~ 285 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD----QPVFATPELPKRGHGASVSSD-GRWVVIT 285 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC----EEEECCTTCTTCEEEEEECTT-SCEEEEE
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC----EEEeccCCCCeEEEEEEECCC-CCEEEEE
Confidence 58999999 99888887665 9999987652110 011111111 24889999995 6677776
Q ss_pred eCCC-----cEEEEeCCCc
Q 002843 848 DYDG-----VVKVCMSCRL 861 (874)
Q Consensus 848 ~~Dg-----~V~~WD~~~~ 861 (874)
+.++ .|.+||+.++
T Consensus 286 ~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 286 SSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp EECTTCSCCEEEEEEEETT
T ss_pred EEccCCCcceEEEEECCCC
Confidence 6544 8999999765
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=90.53 E-value=1.3 Score=46.80 Aligned_cols=87 Identities=8% Similarity=0.026 Sum_probs=57.1
Q ss_pred ceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecC--CCcEEEeeCCCCCCCCcccccCeeee--cCCCceeEEEEeC
Q 002843 763 KFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGV--SKKIKIFEFNALFNDSVDVYYPAVEM--SNRSKLSCVCWNN 838 (874)
Q Consensus 763 ~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~--dk~Ikiwd~~~~~~~~~~~~~p~~~~--~~~~~v~~l~wnp 838 (874)
+.++++++.|+ .......|+|+|||.+++|.|. +.+|.++|++++. .+..+ ..+..-..+++..
T Consensus 8 ~~~vv~~~p~~----~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~--------v~~~i~l~~~~fgeGi~~~g 75 (266)
T 2iwa_A 8 IVEVLNEFPHD----PYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK--------VENIHKMDDSYFGEGLTLLN 75 (266)
T ss_dssp EEEEEEEEECC----TTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC--------EEEEEECCTTCCEEEEEEET
T ss_pred CceEEEEEECC----CCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC--------EEEEEecCCCcceEEEEEeC
Confidence 47899999873 2335678999999887777664 6899999999862 11111 1121223566653
Q ss_pred CCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 839 YIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 839 ~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
+.+.++.-.+++|.++|..+.+.
T Consensus 76 --~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 76 --EKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp --TEEEEEETTCSEEEEEETTTTEE
T ss_pred --CEEEEEEecCCEEEEEECCCCcE
Confidence 33444444588999999987644
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=90.22 E-value=1.4 Score=44.92 Aligned_cols=72 Identities=6% Similarity=0.004 Sum_probs=54.2
Q ss_pred CCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEEEe
Q 002843 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKVCM 857 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD 857 (874)
...+.+|+++++|.++++...++.|..||..... ....+. ....+.++++.| ++.++++...++.|.+||
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~--------~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d 126 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGII--------KEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRIT 126 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE--------EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEEC
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE--------EEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEEC
Confidence 4679999999999998888878999999976221 001111 235688999998 467777777788999999
Q ss_pred CC
Q 002843 858 SC 859 (874)
Q Consensus 858 ~~ 859 (874)
..
T Consensus 127 ~~ 128 (299)
T 2z2n_A 127 DD 128 (299)
T ss_dssp TT
T ss_pred CC
Confidence 83
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=89.28 E-value=0.47 Score=53.64 Aligned_cols=72 Identities=6% Similarity=0.081 Sum_probs=51.8
Q ss_pred EEEECCCCCE-EEEec---------CCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeC-CCc
Q 002843 784 SISFDRDEDH-FAAAG---------VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY-DGV 852 (874)
Q Consensus 784 si~F~~d~~~-lAT~g---------~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~-Dg~ 852 (874)
.++|+|||.+ +++-+ .+++|-|+|..+. ..+..+.....-.+|+|+|+.+.+|+++.+ +++
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~--------kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~ 394 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG--------ERINKIELGHEIDSINVSQDAEPLLYALSAGTQT 394 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC--------CEEEEEEEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC--------eEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCe
Confidence 4799999986 44432 2468999999986 222223222346799999965548888885 999
Q ss_pred EEEEeCCCccc
Q 002843 853 VKVCMSCRLST 863 (874)
Q Consensus 853 V~~WD~~~~~~ 863 (874)
|.|+|+.+++.
T Consensus 395 VsVID~~t~kv 405 (426)
T 3c75_H 395 LHIYDAATGEE 405 (426)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCCE
Confidence 99999998754
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=89.25 E-value=0.2 Score=56.08 Aligned_cols=31 Identities=23% Similarity=0.256 Sum_probs=27.2
Q ss_pred HHCCCcccCCCCCceEEecCCcEEEeccccch
Q 002843 346 HTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 346 Hs~gIIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
+...++|+|++|.|||++.++ ++++||+.+.
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~ 260 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSF 260 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCE
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCcccc
Confidence 456799999999999998776 9999998876
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.11 E-value=0.3 Score=53.51 Aligned_cols=64 Identities=8% Similarity=-0.093 Sum_probs=39.2
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 790 DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 790 d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
++.++++|+.|+.|..||..++. .+-.... +.+.+..+.. +..++++++.||.|..||..+++.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~--------~~W~~~~-~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~ 71 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGS--------IKWTLKE-DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEG 71 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCC--------EEEEEEC-CCSCCCC------CCEEECTTTCCEEEC-----CC
T ss_pred eCCEEEEEcCCCEEEEEECCCCC--------EEEEecC-CCceecceEc-CCCEEEEeCCCCEEEEEECCCCce
Confidence 68899999999999999999872 1111122 3344444444 355788888999999999987754
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=88.95 E-value=0.59 Score=52.84 Aligned_cols=89 Identities=15% Similarity=0.069 Sum_probs=61.6
Q ss_pred eeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEec----------CCCcEEEeeCCCCCCCCcccccCeeeecC-
Q 002843 759 ARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG----------VSKKIKIFEFNALFNDSVDVYYPAVEMSN- 827 (874)
Q Consensus 759 ~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g----------~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~- 827 (874)
..-.++++++++.-| ..+ .|+|+|||++|..+. .+..|-++|..+.. .+.++.-
T Consensus 104 ID~~t~~vv~~I~vG-----~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~--------vv~~I~v~ 168 (426)
T 3c75_H 104 IDGSTGRILGMTDGG-----FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL--------PIADIELP 168 (426)
T ss_dssp EETTTTEEEEEEEEC-----SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------EEEEEEET
T ss_pred EECCCCEEEEEEECC-----CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc--------EEEEEECC
Confidence 334678999999865 234 799999999855554 46799999999861 2222211
Q ss_pred -------CCceeEEEEeCCCCCEEEEeeC--CCcEEEEeCCCccc
Q 002843 828 -------RSKLSCVCWNNYIKNYLASADY--DGVVKVCMSCRLST 863 (874)
Q Consensus 828 -------~~~v~~l~wnp~~~~~laS~~~--Dg~V~~WD~~~~~~ 863 (874)
...-..++++|+ +.+|..++. +++|.+.|+.+.+.
T Consensus 169 g~~r~~~g~~P~~~~~spD-Gk~lyV~n~~~~~~VsVID~~t~kv 212 (426)
T 3c75_H 169 DAPRFLVGTYQWMNALTPD-NKNLLFYQFSPAPAVGVVDLEGKTF 212 (426)
T ss_dssp TCCCCCBSCCGGGSEECTT-SSEEEEEECSSSCEEEEEETTTTEE
T ss_pred CccccccCCCcceEEEcCC-CCEEEEEecCCCCeEEEEECCCCeE
Confidence 122357899995 556666664 58999999998644
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=88.57 E-value=1.6 Score=45.82 Aligned_cols=71 Identities=4% Similarity=-0.085 Sum_probs=52.8
Q ss_pred CCCeeEEEECCCCC-EEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEe
Q 002843 779 ANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCM 857 (874)
Q Consensus 779 ~~~V~si~F~~d~~-~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD 857 (874)
..+..+.+|+|+|+ ++.++..+++|..||..... .........+..++|+|. ++++++...++.|.+||
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~---------~~~~~~~~~~~gl~~d~d-G~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTV---------DVLLDATAFTNGNAVDAQ-QRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCE---------EEEEESCSCEEEEEECTT-SCEEEEETTTTEEEEEC
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCE---------EEEeCCCCccceeeECCC-CCEEEEECCCCEEEEEC
Confidence 56778999999999 57888889999999974221 011123355889999995 66777666678999999
Q ss_pred CC
Q 002843 858 SC 859 (874)
Q Consensus 858 ~~ 859 (874)
..
T Consensus 114 ~~ 115 (305)
T 3dr2_A 114 AD 115 (305)
T ss_dssp TT
T ss_pred CC
Confidence 86
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=88.37 E-value=1.5 Score=45.76 Aligned_cols=61 Identities=7% Similarity=0.086 Sum_probs=43.3
Q ss_pred CCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCC-CceeEEEEe-CCCCCEEEEee
Q 002843 780 NVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR-SKLSCVCWN-NYIKNYLASAD 848 (874)
Q Consensus 780 ~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~-~~v~~l~wn-p~~~~~laS~~ 848 (874)
.....++++++|.+.++...+++|.+||..++ ..+..+... ..++|++|. |..+.+.+++.
T Consensus 199 ~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG--------~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 199 QIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG--------KRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CEEEEEEEBTTSCEEEEEETTTEEEEECTTTC--------CEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc--------eEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 46779999999998777777889999999865 122333323 578999999 75444444443
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=87.56 E-value=3.5 Score=44.08 Aligned_cols=101 Identities=5% Similarity=0.062 Sum_probs=59.1
Q ss_pred ceeeee--ceeEeEEec-ccCCCCCCCCeeEEEECCCCCE-EEEec---CCCcEEEeeCCCCCC-CCccccc-----Cee
Q 002843 757 KYARYS--KFEVQGMLR-TGEFNNSANVICSISFDRDEDH-FAAAG---VSKKIKIFEFNALFN-DSVDVYY-----PAV 823 (874)
Q Consensus 757 ~~~ry~--~~~~~~~l~-~~~~~~~~~~V~si~F~~d~~~-lAT~g---~dk~Ikiwd~~~~~~-~~~~~~~-----p~~ 823 (874)
+..+|. +.+++.++. ......+.+.++.|+|+|++.+ ++|.. .+..|.+||+.++.. ...+.|. +..
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 445553 355555554 2233344567899999987554 67766 789999999986521 1111110 000
Q ss_pred ------ee---c-------CCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCC
Q 002843 824 ------EM---S-------NRSKLSCVCWNNYIKNYLASADYDGVVKVCMSC 859 (874)
Q Consensus 824 ------~~---~-------~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~ 859 (874)
.+ . -...+..|+|+| ++..|..++.++. +||.+.
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~-~l~~~~ 223 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHST-SMYRIK 223 (343)
T ss_dssp CEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCS-EEEEEE
T ss_pred eeECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCC-eEEEEE
Confidence 00 0 012357899999 4678888888774 556553
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=87.37 E-value=1.2 Score=47.43 Aligned_cols=71 Identities=8% Similarity=-0.072 Sum_probs=50.4
Q ss_pred CCeeEEEECCCCC-EEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeC
Q 002843 780 NVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMS 858 (874)
Q Consensus 780 ~~V~si~F~~d~~-~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~ 858 (874)
....+++|+|++. ++.++..+++|.+||..+.. +..+.....+.+++|+|. +.+++++ .+| |.+||.
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~---------~~~~~~~~~v~~i~~~~d-g~l~v~~-~~g-l~~~d~ 116 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGR---------KTVHALPFMGSALAKISD-SKQLIAS-DDG-LFLRDT 116 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTE---------EEEEECSSCEEEEEEEET-TEEEEEE-TTE-EEEEET
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCc---------EEEEECCCcceEEEEeCC-CeEEEEE-CCC-EEEEEC
Confidence 3456889999855 57888888999999998751 111222457899999995 5566654 444 889998
Q ss_pred CCcc
Q 002843 859 CRLS 862 (874)
Q Consensus 859 ~~~~ 862 (874)
.+++
T Consensus 117 ~~g~ 120 (326)
T 2ghs_A 117 ATGV 120 (326)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 7654
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=86.29 E-value=1.3 Score=47.31 Aligned_cols=72 Identities=7% Similarity=-0.111 Sum_probs=44.5
Q ss_pred CCCeeEEEECCCCCEEEEecCC----CcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEE-EEeeCCCcE
Q 002843 779 ANVICSISFDRDEDHFAAAGVS----KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYL-ASADYDGVV 853 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~d----k~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~l-aS~~~Dg~V 853 (874)
.+.+++++|+|+|.++++...+ ....||.+.++. . ..+ .........++|+|+ +..| ++.+.++.|
T Consensus 133 ~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~-----~-~~~--~~~~~~~~~i~~s~d-g~~lyv~~~~~~~I 203 (326)
T 2ghs_A 133 GNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK-----V-TKL--FADISIPNSICFSPD-GTTGYFVDTKVNRL 203 (326)
T ss_dssp TEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE-----E-EEE--EEEESSEEEEEECTT-SCEEEEEETTTCEE
T ss_pred CCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCc-----E-EEe--eCCCcccCCeEEcCC-CCEEEEEECCCCEE
Confidence 4679999999999986654321 345555544321 0 001 111234578999996 5444 555557899
Q ss_pred EEEeCC
Q 002843 854 KVCMSC 859 (874)
Q Consensus 854 ~~WD~~ 859 (874)
.+||+.
T Consensus 204 ~~~d~~ 209 (326)
T 2ghs_A 204 MRVPLD 209 (326)
T ss_dssp EEEEBC
T ss_pred EEEEcc
Confidence 999986
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=85.24 E-value=0.95 Score=54.05 Aligned_cols=55 Identities=11% Similarity=0.007 Sum_probs=36.1
Q ss_pred CcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccce
Q 002843 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLSTY 864 (874)
Q Consensus 801 k~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~~ 864 (874)
++|..||+.++. .+-.+.+...+......+ ...+|+.++.||.|.+||+.+++.+
T Consensus 457 g~l~A~D~~tG~--------~~W~~~~~~~~~~g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 457 GRLLAWDPVAQK--------AAWSVEHVSPWNGGTLTT-AGNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp EEEEEEETTTTE--------EEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cEEEEEeCCCCc--------EEeecCCCCCCcCcceEe-CCCEEEEECCCCcEEEEECCCCcee
Confidence 789999998862 111111122233344444 3568888999999999999988663
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=85.19 E-value=4.1 Score=41.29 Aligned_cols=72 Identities=10% Similarity=0.039 Sum_probs=53.8
Q ss_pred CCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEEEe
Q 002843 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKVCM 857 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD 857 (874)
...+.+|+++++|..+++...++.|.+||.. ..-. . ..+. ....+.+|++.+. +++.++...++.|..||
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~----~---~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~v~~~d 89 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK----E---FEVPTPDAKVMCLIVSSL-GDIWFTENGANKIGKLS 89 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE----E---EECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEEC
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE----E---EECCCCCCcceeEEECCC-CCEEEEecCCCeEEEEC
Confidence 5678899999999998888788999999987 3100 0 1111 2356889999984 66777766688999999
Q ss_pred CC
Q 002843 858 SC 859 (874)
Q Consensus 858 ~~ 859 (874)
..
T Consensus 90 ~~ 91 (300)
T 2qc5_A 90 KK 91 (300)
T ss_dssp TT
T ss_pred CC
Confidence 87
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=85.04 E-value=2.1 Score=47.53 Aligned_cols=77 Identities=13% Similarity=0.057 Sum_probs=50.4
Q ss_pred CCCeeEEEECCC-CCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCc---eeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 779 ANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSK---LSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 779 ~~~V~si~F~~d-~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~---v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
.+.+.+|+|+|+ |.+++ +..+++|..||+.+........ . ....... .+.|+|+|..+.++++-...+.|.
T Consensus 218 ~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~-~---~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~ 292 (409)
T 3hrp_A 218 SGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQ-L---ELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVY 292 (409)
T ss_dssp CSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEE-C---CCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEE
T ss_pred cCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEec-c---cccCCCCCCccccEEEeCCCCEEEEEeCCCCEEE
Confidence 567789999995 55555 5668899999998652111000 0 0011111 239999996676777767789999
Q ss_pred EEeCCC
Q 002843 855 VCMSCR 860 (874)
Q Consensus 855 ~WD~~~ 860 (874)
.||...
T Consensus 293 ~~~~~g 298 (409)
T 3hrp_A 293 KITPDG 298 (409)
T ss_dssp EECTTC
T ss_pred EEecCC
Confidence 999874
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=84.28 E-value=3.7 Score=43.27 Aligned_cols=44 Identities=5% Similarity=0.209 Sum_probs=35.3
Q ss_pred ceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCC--cEEEeeCCCC
Q 002843 763 KFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSK--KIKIFEFNAL 811 (874)
Q Consensus 763 ~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk--~Ikiwd~~~~ 811 (874)
..+++.+..| ....-...|+|+ |+.++.++|.++ +|+++|++++
T Consensus 30 ~~~vv~~~ph----d~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tg 75 (262)
T 3nol_A 30 DYQIVHSYPH----DTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESG 75 (262)
T ss_dssp EEEEEEEEEC----CTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTC
T ss_pred ceEEEEEecC----CCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCC
Confidence 4678888886 235556789999 788788888876 9999999987
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=84.10 E-value=1.2 Score=53.61 Aligned_cols=72 Identities=11% Similarity=0.055 Sum_probs=47.2
Q ss_pred CeeEEEEC-CCCCEEEEe-----cCCCcEEEeeCCCC-CCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCC---
Q 002843 781 VICSISFD-RDEDHFAAA-----GVSKKIKIFEFNAL-FNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD--- 850 (874)
Q Consensus 781 ~V~si~F~-~d~~~lAT~-----g~dk~Ikiwd~~~~-~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~D--- 850 (874)
.+.+.+|| |||++||-+ +...+|.|+|+.++ . .+. ..+. .....++|+|+ +..|+-..+|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~--~l~--~~~~-----~~~~~~~WspD-g~~l~y~~~d~~~ 244 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQ--TIA--DKVS-----GTNGEIVWGPD-HTSLFYVTKDETL 244 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTC--CCC--CCEE-----EECSCCEECSS-TTEEEEEEECTTC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCE--eCC--cccc-----CceeeEEEecC-CCEEEEEEECCCC
Confidence 67899999 999998833 22236999999976 3 111 0111 11468999996 4456555665
Q ss_pred --CcEEEEeCCCcc
Q 002843 851 --GVVKVCMSCRLS 862 (874)
Q Consensus 851 --g~V~~WD~~~~~ 862 (874)
..|.+|++.+++
T Consensus 245 ~~~~v~~~~lgt~~ 258 (751)
T 2xe4_A 245 RENKVWRHVMGKLQ 258 (751)
T ss_dssp CEEEEEEEETTSCG
T ss_pred CCCEEEEEECCCCc
Confidence 258888988753
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=83.97 E-value=2.4 Score=47.83 Aligned_cols=80 Identities=11% Similarity=0.078 Sum_probs=57.9
Q ss_pred CeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcc-c--------ccCeeeec--CCCceeEEEEeCCC--CCEEEEe
Q 002843 781 VICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVD-V--------YYPAVEMS--NRSKLSCVCWNNYI--KNYLASA 847 (874)
Q Consensus 781 ~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~-~--------~~p~~~~~--~~~~v~~l~wnp~~--~~~laS~ 847 (874)
-|.-|..||+|.+||--| +++|.|-++-.......+ . +|++.... ..+.|.++-|.|.. .+.|+.=
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 356699999999999987 779999999843211111 0 22222211 35779999999974 3488888
Q ss_pred eCCCcEEEEeCCCc
Q 002843 848 DYDGVVKVCMSCRL 861 (874)
Q Consensus 848 ~~Dg~V~~WD~~~~ 861 (874)
-.|++|++||+.+.
T Consensus 146 tsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 146 KEDDTITMFDILNS 159 (452)
T ss_dssp ETTSCEEEEETTCT
T ss_pred ecCCEEEEEEcccC
Confidence 88999999999973
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=83.90 E-value=0.4 Score=51.02 Aligned_cols=30 Identities=20% Similarity=0.131 Sum_probs=25.4
Q ss_pred CCCcccCCCCCceEEecCCcEEEeccccch
Q 002843 348 QGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 348 ~gIIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
.+++|+|+.|.|||++.++.+.|+||+.+.
T Consensus 187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 368999999999999876556899998765
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=83.55 E-value=1.1 Score=53.52 Aligned_cols=57 Identities=14% Similarity=0.010 Sum_probs=37.6
Q ss_pred CCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCcccee
Q 002843 800 SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLSTYC 865 (874)
Q Consensus 800 dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~~~ 865 (874)
+++|+.||+.|+.. +-.+.....+..-.+.. ...+|+.|+.||.|+.||..+++.++
T Consensus 454 ~g~l~A~D~~tG~~--------~W~~~~~~~~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw 510 (689)
T 1yiq_A 454 SGKLIAWDPVKQQA--------AWEVPYVTIFNGGTLST-AGNLVFEGSADGRVIAYAADTGEKLW 510 (689)
T ss_dssp EEEEEEEETTTTEE--------EEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ceeEEEEECCCCCe--------EeEccCCCCccCccceE-CCCEEEEECCCCcEEEEECCCCccce
Confidence 47899999998721 11111122222234454 36699999999999999999997743
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=82.43 E-value=1.5 Score=51.57 Aligned_cols=78 Identities=13% Similarity=0.038 Sum_probs=53.5
Q ss_pred eeEEEECCCCCE-EEEecCCCcEEEeeCCCCC---CCCccccc-CeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEE
Q 002843 782 ICSISFDRDEDH-FAAAGVSKKIKIFEFNALF---NDSVDVYY-PAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVC 856 (874)
Q Consensus 782 V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~---~~~~~~~~-p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~W 856 (874)
..+|.|+|||+| ++++.-+.+|-|+|+++.. ...++... .+.++.-...-..++|+|. +....+.-.|+.|.+|
T Consensus 279 PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~d-G~aY~t~~ldsqV~kw 357 (595)
T 1fwx_A 279 PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGR-GNAYTSLFLDSQVVKW 357 (595)
T ss_dssp CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTT-SEEEEEETTTTEEEEE
T ss_pred ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCC-CeEEEEEecCCcEEEE
Confidence 348999999998 8899899999999999641 01111111 2223333445678999995 5433444449999999
Q ss_pred eCCC
Q 002843 857 MSCR 860 (874)
Q Consensus 857 D~~~ 860 (874)
|+..
T Consensus 358 di~~ 361 (595)
T 1fwx_A 358 NIED 361 (595)
T ss_dssp EHHH
T ss_pred EhhH
Confidence 9976
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 874 | ||||
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 2e-09 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 4e-04 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 3e-09 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 5e-09 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 7e-09 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-08 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-08 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-08 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 3e-08 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 9e-08 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-04 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-07 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-07 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 0.003 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-07 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 2e-07 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-07 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 3e-07 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 3e-07 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-07 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 0.003 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 4e-07 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 5e-07 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 5e-07 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 0.002 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 9e-07 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-06 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 1e-06 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-06 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-06 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-06 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-06 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-06 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-06 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 3e-06 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 4e-06 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 5e-06 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 5e-06 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 5e-06 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 5e-06 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 7e-06 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 9e-06 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 0.003 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 3e-05 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 3e-05 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-05 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 1e-04 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-04 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-04 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 3e-04 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 4e-04 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 5e-04 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 0.001 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 0.003 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 0.004 |
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.7 bits (139), Expect = 2e-09
Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFEL------FGRFDSERALAAAMSDLRDRILPPS 550
++ +PE ++ +I+SLG++ E+ + + RAL ++ + P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPE 240
Query: 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583
LS ++ F L + R + +E+LQ +
Sbjct: 241 KLSAIFRD--FLNRCLDMDVEKRGSAKELLQHQ 271
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (96), Expect = 4e-04
Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 311 HGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370
G +L + + +I + R+ + +++ H+ V D+K + L VK
Sbjct: 100 AGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKL 157
Query: 371 I 371
Sbjct: 158 T 158
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.5 bits (136), Expect = 3e-09
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFE-LFGR--FDSERALAAAMSDLRDRILPPSFLS 553
Y PE + G + +++SLGVL +E L G+ F++ R P F++
Sbjct: 169 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 228
Query: 554 ENPKEAGFCLWQLHPEPLSRPTTREILQ 581
E ++ L P RP RE+L+
Sbjct: 229 EGARD--LISRLLKHNPSQRPMLREVLE 254
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.2 bits (135), Expect = 5e-09
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 8/109 (7%)
Query: 478 VSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRF-----DSE 532
++ ++ + +Y SPE+++ S+I+SLG L +EL S+
Sbjct: 160 LARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ 219
Query: 533 RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
+ LA + + + R +P + S+ E L+ + RP+ EIL+
Sbjct: 220 KELAGKIREGKFRRIPYRY-SDELNE--IITRMLNLKDYHRPSVEEILE 265
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.4 bits (133), Expect = 7e-09
Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 5/89 (5%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELF-GR--FDSERALAAAMSDLRDRILPPSFLS 553
+ +PE S ++Y+ G+ E+ + + A + + P SF
Sbjct: 178 EFMAPEMYEEKY-DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDK 236
Query: 554 ENPKEAG-FCLWQLHPEPLSRPTTREILQ 581
E + R + +++L
Sbjct: 237 VAIPEVKEIIEGCIRQNKDERYSIKDLLN 265
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.5 bits (130), Expect = 2e-08
Identities = 21/110 (19%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 475 SPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---RFDS 531
S ++ + + T+ ++ +W A PE +S T++S+++S G++ +E+ R
Sbjct: 157 SRVLEDDPEATYTTSGGKIPIRWTA-PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYW 215
Query: 532 ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
E + M + D P+ + + E RP +I+
Sbjct: 216 ELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.4 bits (130), Expect = 2e-08
Identities = 21/108 (19%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELF-GRF----DSERALAAAMSDLRDRILPPSF 551
+ +PE ++ ++++S+GV+ + L G D+++ A +S + F
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 240
Query: 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLSS 599
+ + F L +P R T ++ LQ + ++ LSS
Sbjct: 241 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW---IKPKDTQQALSS 285
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.5 bits (128), Expect = 3e-08
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD--RILPPSF 551
+ASPE S ++ S+++S GVL +E+F R+ + + D+ R+ P
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRL 226
Query: 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
S + + P RP +L+
Sbjct: 227 ASTHVYQ--IMNHCWKERPEDRPAFSRLLR 254
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.0 bits (129), Expect = 3e-08
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGR----FDSERALAAAMSDLRD-RILPPSF 551
+ + E L TT S+++S GVL +EL R + + L+ R+L P +
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 258
Query: 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
+ E L HP+ RP+ E++
Sbjct: 259 CPDPLYE--VMLKCWHPKAEMRPSFSELVS 286
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.3 bits (125), Expect = 9e-08
Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 10/96 (10%)
Query: 497 WYASPEELSG---GVCTTSSNIYSLGVLFFELF-GR--FDSERALAAAMSDLRDRILPPS 550
+ +PE + + S++Y+ G++ +EL G+ + + + + L P
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD 230
Query: 551 FLSENPKE----AGFCLWQLHPEPLSRPTTREILQS 582
L + RP +IL S
Sbjct: 231 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.6 bits (100), Expect = 1e-04
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 312 GVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369
G +L L+ K + I+ + I RQ +DY H + + DLK ++ L + VK
Sbjct: 87 GSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 144
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.9 bits (124), Expect = 1e-07
Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 8/107 (7%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFE-LFGR--FDSERALAAAMSDLRDRILPPSFLS 553
Y SPE L+ SS++++LG + ++ + G F + ++ P
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 234
Query: 554 ENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE---FQEVCAEELL 597
++ L + R E+ F+ V E L
Sbjct: 235 PKARD--LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLH 279
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.5 bits (123), Expect = 1e-07
Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLS 553
+ +PE L +T S+++S G+L +E++ L + + +
Sbjct: 165 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG 224
Query: 554 ENPKEAGFCLWQLHPEPLSRPTTREILQ 581
P H + RP+ ++ +
Sbjct: 225 CPPAVYEVMKNCWHLDAAMRPSFLQLRE 252
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.1 bits (88), Expect = 0.003
Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 312 GVNLREWLNARGHKGKRIEC-LYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370
+L ++L +RG +C L + ++Y DL + + + N K
Sbjct: 85 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 144
Query: 371 I 371
Sbjct: 145 S 145
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.7 bits (123), Expect = 2e-07
Identities = 14/89 (15%), Positives = 31/89 (34%), Gaps = 4/89 (4%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGR----FDSERALAAAMSDLRDRILPPSFL 552
+ +PE L G+ T S+++S G+L +E+F + A +++
Sbjct: 231 KWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPF 290
Query: 553 SENPKEAGFCLWQLHPEPLSRPTTREILQ 581
+ + RP+ +
Sbjct: 291 YATEEIYIIMQSCWAFDSRKRPSFPNLTS 319
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 51.3 bits (122), Expect = 2e-07
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFE-LFGR--FDSERALAAAMSDLRDRILPPSFLS 553
Y SPE+ G S++YSLG + +E L G F + ++ A +R+ +PPS
Sbjct: 179 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH 238
Query: 554 EN-PKEA-GFCLWQLHPEPLSRPTTREILQSE 583
E + L L P +R T ++++
Sbjct: 239 EGLSADLDAVVLKALAKNPENRYQTAAEMRAD 270
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.3 bits (122), Expect = 2e-07
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFE-LFGR--FDSERALAAAMSDLRDRILPPSFLS 553
Y +PE L G S + +S GVL +E L G+ F + S D P +L
Sbjct: 168 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLE 227
Query: 554 ENPKEAGFCLWQLHPEPLSRPTTR-EILQSEVTNEFQEVCAEELLS 598
+ K+ + EP R R +I Q + F+E+ EEL
Sbjct: 228 KEAKD--LLVKLFVREPEKRLGVRGDIRQHPL---FREINWEELER 268
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.9 bits (121), Expect = 3e-07
Identities = 17/102 (16%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELF--GRFDSERALAAAMSDLRDRILPPSFLSE 554
+ +PE ++ ++ S+++S GVL +E F G+ + ++ + ++ +
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 234
Query: 555 NPKEA-GFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEE 595
P+E + +RP + + N + +V E
Sbjct: 235 CPREMYDLMNLCWTYDVENRPGFAAVEL-RLRNYYYDVVNEG 275
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.4 bits (120), Expect = 3e-07
Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 497 WYASPEELSGG-VCTTSSNIYSLGVLFFELF-GR--FDSERALAAAMSDLRDRILPPSFL 552
Y +PE L +++S G++ + G +D SD +++ +
Sbjct: 170 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 229
Query: 553 SENPKEA-GFCLWQLHPEPLSRPTTREILQSE 583
+ L P +R T +I +
Sbjct: 230 KKIDSAPLALLHKILVENPSARITIPDIKKDR 261
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 51.2 bits (122), Expect = 3e-07
Identities = 22/163 (13%), Positives = 54/163 (33%), Gaps = 11/163 (6%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELF-GRF----DSERALAAAMSDLRDRILPPSF 551
+A+PE G ++++S+GVL + L G +++ + + +F
Sbjct: 190 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF 249
Query: 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLSSIDQDDSESELLL 611
+ F L +P +R T + L+ + + S +
Sbjct: 250 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKT 309
Query: 612 HFLISLEEEKQNQASKLVGEIRSLEADIKEVERRHYLKKPLVD 654
+ + + +G I + + K + + ++ D
Sbjct: 310 KY------DAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWD 346
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 38.5 bits (89), Expect = 0.003
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 312 GVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL--QSNQVK 369
G L E + +K E + RQ+ + + H LDLKP + +SN++K
Sbjct: 107 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELK 166
Query: 370 YI 371
I
Sbjct: 167 LI 168
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.1 bits (119), Expect = 4e-07
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 11/92 (11%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAMSDLRDRILPP 549
++ PE L ++ S+I++ GVL +E+ + RF + L R+ P
Sbjct: 166 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL--RLYRP 223
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
SE H + RPT + +L
Sbjct: 224 HLASEKVYT--IMYSCWHEKADERPTFKILLS 253
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (119), Expect = 5e-07
Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELF--GRFDSERALAAAMSDLRDRILPPSFLSE 554
+ + E + + T S+++S GV +EL G + A+ +S + ++
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 237
Query: 555 NPKEA-GFCLWQLHPEPLSRPTTREILQ 581
+ + + SRP RE++
Sbjct: 238 CTIDVYMIMVKCWMIDADSRPKFRELII 265
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.0 bits (119), Expect = 5e-07
Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 13/96 (13%)
Query: 497 WYASPEEL-----SGGVCTTSSNIYSLGVLFFEL------FGRFDSERALAAAMSDLRDR 545
++ +PE + ++++SLG+ E+ + R L
Sbjct: 175 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 234
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
+ PS S N K+ F L +R TT ++LQ
Sbjct: 235 LAQPSRWSSNFKD--FLKKCLEKNVDARWTTSQLLQ 268
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (90), Expect = 0.002
Identities = 8/60 (13%), Positives = 19/60 (31%)
Query: 312 GVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371
G + + + + +Q + ++Y H + DLK + +K
Sbjct: 93 GGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLA 152
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.9 bits (116), Expect = 9e-07
Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 7/90 (7%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD--RILPPSF 551
+ +PE ++ G T S+++S G+L E+ + +L R++ P
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
Query: 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
E + P RPT +
Sbjct: 235 CPEELYQ--LMRLCWKERPEDRPTFDYLRS 262
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.9 bits (116), Expect = 1e-06
Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELF--GRFDSERALAAAMSDLRDRILPPSFLSE 554
+ +PE G T S+++S G+L EL GR + + D +R E
Sbjct: 179 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 238
Query: 555 NPKEA-GFCLWQLHPEPLSRPTTREILQ 581
P+ EP RPT +
Sbjct: 239 CPESLHDLMCQCWRKEPEERPTFEYLQA 266
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 49.0 bits (116), Expect = 1e-06
Identities = 21/127 (16%), Positives = 47/127 (37%), Gaps = 14/127 (11%)
Query: 475 SPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF--GRFDSE 532
S L++ + + +PE L+ + S++++ GVL +E+ G
Sbjct: 162 SRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 218
Query: 533 RALAAAMSDLRDRILPPSFLSENPKEA-GFCLWQLHPEPLSRPTTREILQ--------SE 583
+ + +L ++ P++ P RP+ EI Q S
Sbjct: 219 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 278
Query: 584 VTNEFQE 590
+++E ++
Sbjct: 279 ISDEVEK 285
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.3 bits (117), Expect = 1e-06
Identities = 23/119 (19%), Positives = 48/119 (40%), Gaps = 5/119 (4%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFE-LFGRF----DSERALAAAMSDLRDRILPPSF 551
Y +PE V +T+++++SLG L + L G ++ + + + + +F
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF 227
Query: 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLSSIDQDDSESELL 610
+ + F L E SR T E LQ + E + +++ ++ L+
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRRYYHTLI 286
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 48.8 bits (116), Expect = 1e-06
Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 11/119 (9%)
Query: 497 WYASPEELSG---GVCTTSSNIYSLGVLFFELFGRF-----DSERALAAAMSDLRDRILP 548
++ +PE + G +++SLG+ EL R + + ++ L
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ 235
Query: 549 PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE-VTNEFQEVCAEELLSSIDQDDSE 606
SE + F L P RPT+ +L+ V E +L+ E
Sbjct: 236 SGHWSEYFRN--FVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRE 292
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.6 bits (115), Expect = 2e-06
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 9/108 (8%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFE-LFGR--FDSERALAAAMSDLRDRILPPSFLS 553
Y +PE +S S + +S G+L +E L G F + L + P F +
Sbjct: 166 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFN 225
Query: 554 ENPKEAGFCLWQLHPE---PLSRPTTREILQSEVTNEFQEVCAEELLS 598
E+ K+ L + T ++ F+EV E+LLS
Sbjct: 226 EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW---FKEVVWEKLLS 270
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 48.3 bits (114), Expect = 2e-06
Identities = 18/146 (12%), Positives = 34/146 (23%), Gaps = 11/146 (7%)
Query: 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504
D+ + FG K + YAS
Sbjct: 128 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENK--NLTGTARYASINTH 185
Query: 505 SGGVCTTSSNIYSLGVLFFE-LFGRF-------DSERALAAAMSDLRDRILPPSFLSENP 556
G + ++ SLG + G ++R +S+ + P
Sbjct: 186 LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYP 245
Query: 557 KEA-GFCLWQLHPEPLSRPTTREILQ 581
E + + +P + Q
Sbjct: 246 SEFATYLNFCRSLRFDDKPDYSYLRQ 271
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 48.1 bits (114), Expect = 2e-06
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFE-LFGR--FDSERALAAAMSDLRDRILPPSFLS 553
Y +PE L+ + + + +S+GV+ + L G F E L+ S
Sbjct: 174 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 233
Query: 554 EN-PKEA-GFCLWQLHPEPLSRPTTREILQ 581
++ A F + +P R T + LQ
Sbjct: 234 DDISDSAKDFIRHLMEKDPEKRFTCEQALQ 263
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 48.1 bits (114), Expect = 2e-06
Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFE-LFGRF----DSERALAAAMSDLRDRILPPSF 551
+A+PE + ++++++GVL + L G + + + +F
Sbjct: 193 EFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAF 252
Query: 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
S +P+ F L EP R T + L+
Sbjct: 253 SSVSPEAKDFIKNLLQKEPRKRLTVHDALE 282
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.4 bits (112), Expect = 3e-06
Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 497 WYASPEELSGG-VCTTSSNIYSLGVLFFE-LFGR--FDSERALAAAMSDLRDRILPPSFL 552
Y+ PE + S+ ++SLG+L ++ + G F+ + + +R ++ +
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------IRGQVFFRQRV 227
Query: 553 SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLSSI 600
S + W L P RPT EI Q+V + + I
Sbjct: 228 SSECQH--LIRWCLALRPSDRPTFEEIQNHPW---MQDVLLPQETAEI 270
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (112), Expect = 4e-06
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELF---GRFDSERALAAAMSDLRDRILPPSFLS 553
+ + E L+ V TT+S+++S GVL +E+ G A L L+
Sbjct: 191 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN 250
Query: 554 ENPKEAGFCLWQLHPEPLSRPTTREILQS 582
+ + +P RP+ +IL S
Sbjct: 251 CDDEVYDLMRQCWREKPYERPSFAQILVS 279
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.2 bits (111), Expect = 5e-06
Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELF---GRFDSERALAAAMSDLRDRILPPSFLS 553
+ +PE L + T S+++S GVL +E+F G + L++ +
Sbjct: 202 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 261
Query: 554 ENPKEAGFCLWQLHPEPLSRPTTREILQ 581
+ H P RPT +++++
Sbjct: 262 CTNELYMMMRDCWHAVPSQRPTFKQLVE 289
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (111), Expect = 5e-06
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGR------FDSERALAAAMSDLRDRILPPS 550
+ +PE + V T S+++S G+ +ELF + M R+L P
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271
Query: 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQ------SEVTN 586
+ +PL RPT ++I+Q SE TN
Sbjct: 272 HAPAEMYD--IMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.7 bits (110), Expect = 5e-06
Identities = 13/89 (14%), Positives = 27/89 (30%), Gaps = 4/89 (4%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGR----FDSERALAAAMSDLRDRILPPSFL 552
+ +PE L + +S+ + GV +E+F + ++ P
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 238
Query: 553 SENPKEAGFCLWQLHPEPLSRPTTREILQ 581
+ +P RPT +
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDRPTFVALRD 267
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.8 bits (110), Expect = 5e-06
Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLS 553
+ PE + TT S++++ GV+ +E+F A + +RD + +
Sbjct: 207 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN 266
Query: 554 ENPKEAGFCLWQLHPEPLSRPTTREILQ 581
+ P RP+ I +
Sbjct: 267 CPLELYNLMRLCWSKLPADRPSFCSIHR 294
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 46.7 bits (110), Expect = 7e-06
Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 5/113 (4%)
Query: 474 SSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR----F 529
S L +T+ TS + +PE + T++S+++S G++ +E+ +
Sbjct: 175 SRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 234
Query: 530 DSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582
+ +D LPP + L + RP +I+ +
Sbjct: 235 WDMTNQDVINAIEQDYRLPPP-MDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.2 bits (109), Expect = 9e-06
Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 17/147 (11%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRI------L 547
+Y +PE L S +++SLGV+ + L F S L A ++ RI
Sbjct: 178 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-AISPGMKTRIRMGQYEF 236
Query: 548 PPSFLSENPKEA-GFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCAEELLSSI------ 600
P SE +E L EP R T E + + +V L +S
Sbjct: 237 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDK 296
Query: 601 DQDDSESELLLHFLISLEEEKQNQASK 627
++ + E + L ++ + + K
Sbjct: 297 ERWEDVKEEMTSALATMRVDYEQIKIK 323
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.5 bits (89), Expect = 0.003
Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Query: 312 GVNLREWLNARGHKG-KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370
G L + RG + E I + I + Y H+ + D+KP +
Sbjct: 93 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 152
Query: 371 I 371
+
Sbjct: 153 L 153
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.9 bits (105), Expect = 3e-05
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 6/101 (5%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELF---GRFDSERALAAAMSDLRDRILPPSFLS 553
+ SPE L GV TT S+++S GV+ +E+ + + + + + L +
Sbjct: 200 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 259
Query: 554 ENPKEAGFCLWQLHPEPLSRPTTREI---LQSEVTNEFQEV 591
P RP+ EI ++ E+ F+EV
Sbjct: 260 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 300
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.5 bits (104), Expect = 3e-05
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGR----FDSERALAAAMSDLRDRILPPSFL 552
+ +PE + V T S+++S GVL +E+F + + L++ +
Sbjct: 201 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 260
Query: 553 SENPKEAGFCLWQLHPEPLSRPTTREILQ 581
P+ L H EP RPT E+++
Sbjct: 261 YTTPEMYQTMLDCWHGEPSQRPTFSELVE 289
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.3 bits (104), Expect = 4e-05
Identities = 25/147 (17%), Positives = 51/147 (34%), Gaps = 16/147 (10%)
Query: 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELF-GR--FDSERALAAAMSDLRDRILPPSFL 552
+ Y SPE L G + S+I+S+G+ E+ GR A + +
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAET 226
Query: 553 SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC-------AEELLSSIDQDDS 605
P+ G L + E+L V ++ ++ ++ +
Sbjct: 227 PPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNP 286
Query: 606 E-----SELLLH-FLISLEEEKQNQAS 626
+L++H F+ + E+ + A
Sbjct: 287 AERADLKQLMVHAFIKRSDAEEVDFAG 313
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 42.7 bits (100), Expect = 1e-04
Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 312 GVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371
L ++L + ++ E I R ++ ++ H + DLKP + L +K
Sbjct: 94 KGELFDYLTEKVTLSEK-ETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLT 152
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 42.0 bits (98), Expect = 2e-04
Identities = 12/90 (13%), Positives = 25/90 (27%), Gaps = 5/90 (5%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFE-LFGRF----DSERALAAAMSDLRDRILPPSF 551
+ +++S GV+ + L G + + + + P +
Sbjct: 180 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEW 239
Query: 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
+ L +P R T E L
Sbjct: 240 DDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (97), Expect = 2e-04
Identities = 17/134 (12%), Positives = 41/134 (30%), Gaps = 29/134 (21%)
Query: 477 LVSNTAQQQSTSVSEQLEEKWYASPEELSGGV------CTTSSNIYSLGVLFFELFGR-- 528
+ + + ++ K Y +PE L + ++IY++G++F+E+ R
Sbjct: 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 216
Query: 529 -----------FDSERALAAAMSDLRDRILPPSFLSENPKEAGFC----------LWQLH 567
+ ++ ++R + P C +
Sbjct: 217 IGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWY 276
Query: 568 PEPLSRPTTREILQ 581
+R T I +
Sbjct: 277 ANGAARLTALRIKK 290
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (96), Expect = 3e-04
Identities = 20/113 (17%), Positives = 35/113 (30%), Gaps = 28/113 (24%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGR---------------------------F 529
WY +PE L T +++S+G +F E+F R +
Sbjct: 180 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 239
Query: 530 DSERALAAAMSDLRDRILPPSFLSENPKEA-GFCLWQLHPEPLSRPTTREILQ 581
+ AL + F+++ + L L P R + L
Sbjct: 240 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.9 bits (95), Expect = 4e-04
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 3/88 (3%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELF--GRFDSERALAAAMSDLRDRILPPSFLSE 554
+ +PE ++ T++S+++ GV +E+ G + + +
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 233
Query: 555 NPKEA-GFCLWQLHPEPLSRPTTREILQ 581
P +P RP E+
Sbjct: 234 CPPTLYSLMTKCWAYDPSRRPRFTELKA 261
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 40.6 bits (94), Expect = 5e-04
Identities = 15/94 (15%), Positives = 29/94 (30%), Gaps = 9/94 (9%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFE-LFGRFDSERALAAAMSDLRDRIL-------P 548
Y S G + ++ +LG +F L G + AA +RI
Sbjct: 178 RYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL 237
Query: 549 PSFLSENPKE-AGFCLWQLHPEPLSRPTTREILQ 581
+ P+E + + + + P +
Sbjct: 238 RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 39.8 bits (92), Expect = 0.001
Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 6/91 (6%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLS 553
+PE + + + ++LGVL +E+ F +++ + + ++ PS S
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFS 262
Query: 554 ENPKEAGFCLWQLHPE---PLSRPTTREILQ 581
+ K+ L Q+ + +I
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 38.7 bits (88), Expect = 0.003
Identities = 11/85 (12%), Positives = 27/85 (31%), Gaps = 6/85 (7%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIK 841
I ++++D A + ++ I+E + V + +++ V W
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK-----EHNGQVTGVDWAPD-S 63
Query: 842 NYLASADYDGVVKVCMSCRLSTYCF 866
N + + D V +
Sbjct: 64 NRIVTCGTDRNAYVWTLKGRTWKPT 88
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 38.2 bits (88), Expect = 0.004
Identities = 14/83 (16%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 311 HGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370
+G +L L+ G + + + +I+ +++ H + V + DLKP++ L + V+
Sbjct: 90 NGGDLHYHLSQHGVFSEA-DMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 148
Query: 371 IGPIIQKETLESASLDIPHSENY 393
+ + + + Y
Sbjct: 149 SDLGLACDFSKKKPHASVGTHGY 171
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 874 | |||
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.97 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.96 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.48 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.45 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.28 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.27 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.26 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.24 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.23 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.16 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.15 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.14 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.11 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.09 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.09 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.06 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.05 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.03 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.03 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.02 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.02 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.01 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.01 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 98.99 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 98.92 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 98.9 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 98.85 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 98.76 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 98.71 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 98.65 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 98.63 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 98.59 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.54 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.48 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.42 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 98.21 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 98.18 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 98.08 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 98.07 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 98.04 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 97.99 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 97.96 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 97.65 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 97.6 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 97.36 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 97.31 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 97.18 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 97.04 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 96.89 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 96.79 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 96.58 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 96.35 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 95.33 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 95.09 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 94.48 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 92.66 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 92.34 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 91.65 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 90.07 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 90.07 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 87.6 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 87.28 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 86.87 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 86.75 |
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.6e-42 Score=373.09 Aligned_cols=240 Identities=17% Similarity=0.195 Sum_probs=182.3
Q ss_pred ceEEEecCCCCcccccccccccccccccC-CChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
.|+||++.. .. .++..+++.++.. .+........+..+++...||+++.+++....++..
T Consensus 19 fg~V~~~~~----~~-~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~-------------- 79 (322)
T d1s9ja_ 19 GGVVFKVSH----KP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI-------------- 79 (322)
T ss_dssp SCCEEEEEE----TT-TTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEE--------------
T ss_pred CeEEEEEEE----CC-CCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE--------------
Confidence 366777751 11 1223333444332 233445566788899999999999999987755543
Q ss_pred CCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~-gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
++|||||+||+|.++|.+.+ .+++.+++.++.||+.||+|||++ |||||||||+||||+.++.+||+|||+|+...
T Consensus 80 --~iVmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 156 (322)
T d1s9ja_ 80 --SICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156 (322)
T ss_dssp --EEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred --EEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccC
Confidence 46999999999999998776 699999999999999999999974 99999999999999999999999999987433
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
+.
T Consensus 157 ~~------------------------------------------------------------------------------ 158 (322)
T d1s9ja_ 157 DS------------------------------------------------------------------------------ 158 (322)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 00
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHHH---
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA--- 537 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--- 537 (874)
..+..+||++|||||++.+.+|+.++|||||||++|||++|..||.....
T Consensus 159 ---------------------------~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~ 211 (322)
T d1s9ja_ 159 ---------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211 (322)
T ss_dssp ---------------------------TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHH
T ss_pred ---------------------------ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 00345899999999999999999999999999999999999988732100
Q ss_pred -H----------------------------------------HHHhhcCCCCCCCC--CCCHHHHHHHHHccccCCCCCC
Q 002843 538 -A----------------------------------------MSDLRDRILPPSFL--SENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 538 -~----------------------------------------~~~l~~~~lpp~~~--~~~p~l~dLi~~cL~~dP~~RP 574 (874)
. ...+.. ..++... ..++.+.+||.+||.+||.+||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ 290 (322)
T d1s9ja_ 212 ELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVN-EPPPKLPSGVFSLEFQDFVNKCLIKNPAERA 290 (322)
T ss_dssp HHHC------------------------------CCCCHHHHHHHHHT-SCCCCCCBTTBCHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhc-cCCccCccccCCHHHHHHHHHHcCCChhHCc
Confidence 0 000000 1112221 2346789999999999999999
Q ss_pred ChhHHhhhHHHHhhHh
Q 002843 575 TTREILQSEVTNEFQE 590 (874)
Q Consensus 575 Ta~EiL~hp~~~~~~~ 590 (874)
|+.|+|+||||+....
T Consensus 291 ta~e~L~Hpf~~~~~~ 306 (322)
T d1s9ja_ 291 DLKQLMVHAFIKRSDA 306 (322)
T ss_dssp CHHHHHTSHHHHHHHH
T ss_pred CHHHHhhCHhhCcCCc
Confidence 9999999999987553
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-42 Score=371.22 Aligned_cols=211 Identities=14% Similarity=0.080 Sum_probs=171.8
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.++.....+... +++||||+||+|.++|.+.+ .+++.+++.|++||
T Consensus 50 ~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~----------------~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~i~~qi 112 (271)
T d1nvra_ 50 IKKEICINKMLNHENVVKFYGHRREGNIQ----------------YLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQL 112 (271)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEEETTEE----------------EEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEeeEeeeeccCcee----------------EEEEeccCCCcHHHHHhcCC-CCCHHHHHHHHHHH
Confidence 45566788889999999999887755443 45999999999999997765 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++|||||||||+|||++.++.+||+|||+|+.......
T Consensus 113 ~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~---------------------------------- 158 (271)
T d1nvra_ 113 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---------------------------------- 158 (271)
T ss_dssp HHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTE----------------------------------
T ss_pred HHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCc----------------------------------
Confidence 9999999999999999999999999999999999999875431000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
....+..+||+.|
T Consensus 159 -------------------------------------------------------------------~~~~~~~~GT~~Y 171 (271)
T d1nvra_ 159 -------------------------------------------------------------------ERLLNKMCGTLPY 171 (271)
T ss_dssp -------------------------------------------------------------------ECCBCCCCSCGGG
T ss_pred -------------------------------------------------------------------cccccceeeCcCc
Confidence 0001456899999
Q ss_pred cCcccccCCCC-CCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhhc-CCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 499 ASPEELSGGVC-TTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 499 ~APEvl~g~~y-s~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~~-~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
||||++.+..| +.++|||||||+||||++|..||... ......+.. ....+.+...++.+.+||.+||++||++|
T Consensus 172 ~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 251 (271)
T d1nvra_ 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 251 (271)
T ss_dssp SCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred cCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHC
Confidence 99999998776 67899999999999999999998421 122223333 33333344567889999999999999999
Q ss_pred CChhHHhhhHHHHh
Q 002843 574 PTTREILQSEVTNE 587 (874)
Q Consensus 574 PTa~EiL~hp~~~~ 587 (874)
||+.|+|+||||+.
T Consensus 252 ~t~~eil~hpwf~~ 265 (271)
T d1nvra_ 252 ITIPDIKKDRWYNK 265 (271)
T ss_dssp CCHHHHTTCTTTTC
T ss_pred cCHHHHhcCHhhCc
Confidence 99999999999974
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-41 Score=362.39 Aligned_cols=207 Identities=14% Similarity=0.094 Sum_probs=171.6
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..+++...||+++.++.....++.. +++||||+||+|.++|.+.+ .+++.+++.|+.|
T Consensus 52 ~~~~E~~il~~l~hpnIv~~~~~~~~~~~~----------------~ivmEy~~~g~L~~~l~~~~-~l~e~~~~~i~~q 114 (263)
T d2j4za1 52 QLRREVEIQSHLRHPNILRLYGYFHDATRV----------------YLILEYAPLGTVYRELQKLS-KFDEQRTATYITE 114 (263)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEEECSSEE----------------EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCeEEEEEEECCEE----------------EEEEeecCCCcHHHHHhhcC-CCCHHHHHHHHHH
Confidence 345567788899999999999887755443 45999999999999998766 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++|||||||||+|||++.++.+||+|||+++.....
T Consensus 115 i~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~----------------------------------- 159 (263)
T d2j4za1 115 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----------------------------------- 159 (263)
T ss_dssp HHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC-----------------------------------
T ss_pred HHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCC-----------------------------------
Confidence 999999999999999999999999999999999999998632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
......||+.
T Consensus 160 ----------------------------------------------------------------------~~~~~~Gt~~ 169 (263)
T d2j4za1 160 ----------------------------------------------------------------------RRTTLCGTLD 169 (263)
T ss_dssp ----------------------------------------------------------------------CCEETTEEGG
T ss_pred ----------------------------------------------------------------------cccccCCCCc
Confidence 0034579999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
|||||++.+..|+.++|||||||+||||++|..||.. ....+..+.....+ .....++.+.+||.+||++||++|||
T Consensus 170 Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dp~~R~t 248 (263)
T d2j4za1 170 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPM 248 (263)
T ss_dssp GCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC-CCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred ccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-CCccCCHHHHHHHHHHccCCHhHCcC
Confidence 9999999999999999999999999999999999853 22334444332211 11234578999999999999999999
Q ss_pred hhHHhhhHHHHh
Q 002843 576 TREILQSEVTNE 587 (874)
Q Consensus 576 a~EiL~hp~~~~ 587 (874)
+.|+|+||||..
T Consensus 249 ~~eil~hp~~~~ 260 (263)
T d2j4za1 249 LREVLEHPWITA 260 (263)
T ss_dssp HHHHHTCHHHHH
T ss_pred HHHHHcCcCcCC
Confidence 999999999985
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-41 Score=365.45 Aligned_cols=241 Identities=14% Similarity=0.086 Sum_probs=184.6
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
|.|.||++.. ... ++..+.+.+......+......+..+++...||+++.++.....+...
T Consensus 32 ~fg~Vy~a~~----~~~-~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~-------------- 92 (293)
T d1yhwa1 32 ASGTVYTAMD----VAT-GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL-------------- 92 (293)
T ss_dssp SSCEEEEEEB----TTT-CCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE--------------
T ss_pred cCcEEEEEEE----CCC-CCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEE--------------
Confidence 3477888852 111 122223333332223344556677888999999999999887655443
Q ss_pred CCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
+++||||+||+|.+++.+. .+++.+++.|++||+.||+|||++|||||||||+|||++.++++||+|||+++.+..
T Consensus 93 --~ivmEy~~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~ 168 (293)
T d1yhwa1 93 --WVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (293)
T ss_dssp --EEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred --EEEEEecCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecc
Confidence 4699999999999998775 599999999999999999999999999999999999999999999999999874330
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
..
T Consensus 169 ~~------------------------------------------------------------------------------ 170 (293)
T d1yhwa1 169 EQ------------------------------------------------------------------------------ 170 (293)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH---HHH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL---AAA 538 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~ 538 (874)
......+||+.|+|||++.+..|+.++|||||||+||||++|..||... ...
T Consensus 171 -------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~ 225 (293)
T d1yhwa1 171 -------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225 (293)
T ss_dssp -------------------------CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred -------------------------ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHH
Confidence 0013557999999999999999999999999999999999999998432 222
Q ss_pred HHHhhcCCCCCC-CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 539 MSDLRDRILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 539 ~~~l~~~~lpp~-~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
...+.....+.. ....++.+.+||.+||++||.+|||+.|+|+||||+..
T Consensus 226 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~ 276 (293)
T d1yhwa1 226 YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (293)
T ss_dssp HHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence 222333332222 23446789999999999999999999999999999753
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-41 Score=361.35 Aligned_cols=209 Identities=15% Similarity=0.093 Sum_probs=171.2
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeec--CcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSN--GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYI 334 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I 334 (874)
.....+..++....||+++.+++..... +... -+++||||+||+|.++|.+.+ .+++.+++.|
T Consensus 53 ~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~--------------~~ivmE~~~~g~L~~~l~~~~-~~~~~~~~~~ 117 (270)
T d1t4ha_ 53 QRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC--------------IVLVTELMTSGTLKTYLKRFK-VMKIKVLRSW 117 (270)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE--------------EEEEEECCCSCBHHHHHHHHS-SCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCE--------------EEEEEeCCCCCcHHHHHhccc-cccHHHHHHH
Confidence 3455677889999999999998765421 1111 157999999999999998765 7999999999
Q ss_pred HHHHHHHHHHHHHCC--CcccCCCCCceEEe-cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchh
Q 002843 335 FRQIVALVDYHHTQG--VTFLDLKPSSFKLL-QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (874)
Q Consensus 335 ~~QIl~aL~yLHs~g--IIHRDLKPsNILL~-~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~ 411 (874)
+.||+.||+|||++| ||||||||+|||++ .++.+||+|||+++....
T Consensus 118 ~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~------------------------------ 167 (270)
T d1t4ha_ 118 CRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA------------------------------ 167 (270)
T ss_dssp HHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT------------------------------
T ss_pred HHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC------------------------------
Confidence 999999999999999 99999999999997 478999999999863220
Q ss_pred hhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccc
Q 002843 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (874)
Q Consensus 412 ~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~ 491 (874)
.....
T Consensus 168 ---------------------------------------------------------------------------~~~~~ 172 (270)
T d1t4ha_ 168 ---------------------------------------------------------------------------SFAKA 172 (270)
T ss_dssp ---------------------------------------------------------------------------TSBEE
T ss_pred ---------------------------------------------------------------------------CccCC
Confidence 00034
Q ss_pred ccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH---HHHHHHHhhcCCCCCCCCC-CCHHHHHHHHHccc
Q 002843 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA---LAAAMSDLRDRILPPSFLS-ENPKEAGFCLWQLH 567 (874)
Q Consensus 492 ~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~---~~~~~~~l~~~~lpp~~~~-~~p~l~dLi~~cL~ 567 (874)
.+||+.|||||++.+ +|+.++|||||||+||||++|..||.. .......+.....|+.+.. ..+.+.+||.+||.
T Consensus 173 ~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~ 251 (270)
T d1t4ha_ 173 VIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIR 251 (270)
T ss_dssp SCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSC
T ss_pred cccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHcc
Confidence 579999999999876 699999999999999999999999843 3344555665555555443 45789999999999
Q ss_pred cCCCCCCChhHHhhhHHHH
Q 002843 568 PEPLSRPTTREILQSEVTN 586 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~~ 586 (874)
+||++|||+.|+|+||||+
T Consensus 252 ~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 252 QNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp SSGGGSCCHHHHHTSGGGC
T ss_pred CCHhHCcCHHHHhCCcccC
Confidence 9999999999999999985
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-41 Score=361.78 Aligned_cols=212 Identities=17% Similarity=0.174 Sum_probs=164.2
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHh---CCCCCCHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLY 333 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~---~~~~lse~e~~~ 333 (874)
.....+..++....||+++.++..........+ +++||||+||+|.+++.+ .+..+++.+++.
T Consensus 48 ~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~--------------~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~ 113 (269)
T d2java1 48 QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL--------------YIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 113 (269)
T ss_dssp HHHHHHHHHTTSCCCTTBCCEEEEEEC----CE--------------EEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEE--------------EEEEecCCCCcHHHHHHhccccCCCCCHHHHHH
Confidence 345567788899999999999887653222221 469999999999999964 234799999999
Q ss_pred HHHHHHHHHHHHHHCC-----CcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhcccc
Q 002843 334 IFRQIVALVDYHHTQG-----VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTG 408 (874)
Q Consensus 334 I~~QIl~aL~yLHs~g-----IIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~ 408 (874)
|+.||+.||+|||++| ||||||||+||||+.++.+||+|||+++.+....
T Consensus 114 i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~------------------------- 168 (269)
T d2java1 114 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT------------------------- 168 (269)
T ss_dssp HHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-----------------------------
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCC-------------------------
Confidence 9999999999999976 9999999999999999999999999998543100
Q ss_pred chhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccc
Q 002843 409 IASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTS 488 (874)
Q Consensus 409 ~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~ 488 (874)
..
T Consensus 169 ------------------------------------------------------------------------------~~ 170 (269)
T d2java1 169 ------------------------------------------------------------------------------SF 170 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------------------------Cc
Confidence 00
Q ss_pred cccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHcc
Q 002843 489 VSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 489 ~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL 566 (874)
....+||+.|||||++.+..|+.++|||||||+||||++|..||.. .......+.....++.....++.+.+||.+||
T Consensus 171 ~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~s~~l~~li~~~L 250 (269)
T d2java1 171 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 250 (269)
T ss_dssp -----CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHT
T ss_pred cccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHc
Confidence 1346789999999999999999999999999999999999999843 23344555555555444456688999999999
Q ss_pred ccCCCCCCChhHHhhhHHH
Q 002843 567 HPEPLSRPTTREILQSEVT 585 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~ 585 (874)
++||.+|||+.|+|+|||+
T Consensus 251 ~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 251 NLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp CSSGGGSCCHHHHHTSTTC
T ss_pred CCChhHCcCHHHHHhCCcC
Confidence 9999999999999999995
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-41 Score=364.05 Aligned_cols=241 Identities=14% Similarity=0.123 Sum_probs=183.3
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (874)
.|.||++.. .. .+...+++.++.....+......+..+++...||+++.++.....++..
T Consensus 25 fg~Vy~~~~----~~-~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~--------------- 84 (288)
T d2jfla1 25 FGKVYKAQN----KE-TSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNL--------------- 84 (288)
T ss_dssp TEEEEEEEE----TT-TCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEE---------------
T ss_pred CcEEEEEEE----CC-CCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeE---------------
Confidence 366888752 11 1122233334444334444555677788889999999999887655443
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcccc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLES 382 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~ 382 (874)
+++||||+||+|.+++.+.+..+++.+++.|+.||+.||+|||++|||||||||+|||++.++.+||+|||+++.....
T Consensus 85 -~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~ 163 (288)
T d2jfla1 85 -WILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 163 (288)
T ss_dssp -EEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH
T ss_pred -EEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCC
Confidence 4599999999999998776557999999999999999999999999999999999999999999999999998643300
Q ss_pred ccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccc
Q 002843 383 ASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHH 462 (874)
Q Consensus 383 ~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~ 462 (874)
.
T Consensus 164 ~------------------------------------------------------------------------------- 164 (288)
T d2jfla1 164 I------------------------------------------------------------------------------- 164 (288)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cccCcCCCCCCCCCcccccccccccccccccccccccCccccc-----CCCCCCccchhHHHHHHHHhcCCCCchHHHH-
Q 002843 463 TNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-----GGVCTTSSNIYSLGVLFFELFGRFDSERALA- 536 (874)
Q Consensus 463 ~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~-----g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~- 536 (874)
......+||+.|||||++. +..|+.++|||||||+||||++|..||....
T Consensus 165 ------------------------~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~ 220 (288)
T d2jfla1 165 ------------------------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 220 (288)
T ss_dssp ------------------------HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCG
T ss_pred ------------------------ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCH
Confidence 0013457999999999984 4568999999999999999999999985321
Q ss_pred -HHHHHhhcCCCC--CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 537 -AAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 537 -~~~~~l~~~~lp--p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
..+..+.....+ +.....++.+.+||.+||++||++|||+.|+|+||||+.
T Consensus 221 ~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~ 274 (288)
T d2jfla1 221 MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 274 (288)
T ss_dssp GGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred HHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence 223333332221 122344678999999999999999999999999999974
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=9.4e-41 Score=363.23 Aligned_cols=208 Identities=17% Similarity=0.186 Sum_probs=162.1
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.++.....++.. +++||||+||+|.++|.+.+ .+++.++..|+.||
T Consensus 54 ~~~Ei~il~~l~HpnIv~l~~~~~~~~~~----------------~lvmE~~~gg~L~~~l~~~~-~l~e~~~~~~~~qi 116 (307)
T d1a06a_ 54 MENEIAVLHKIKHPNIVALDDIYESGGHL----------------YLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQV 116 (307)
T ss_dssp -CHHHHHHHTCCCTTBCCEEEEEECSSEE----------------EEEECCCCSCBHHHHHHTCS-CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEEECCEE----------------EEEEeccCCCcHHHhhhccc-CCCHHHHHHHHHHH
Confidence 34566778888999999999887655443 45999999999999998776 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEe---cCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLL---QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~---~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
+.||+|||++|||||||||+|||+. .++.+||+|||+++.....
T Consensus 117 ~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~--------------------------------- 163 (307)
T d1a06a_ 117 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--------------------------------- 163 (307)
T ss_dssp HHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------------------------------------------
T ss_pred HHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCC---------------------------------
Confidence 9999999999999999999999995 4688999999998743200
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
......+||
T Consensus 164 -----------------------------------------------------------------------~~~~~~~GT 172 (307)
T d1a06a_ 164 -----------------------------------------------------------------------SVLSTACGT 172 (307)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------------------------------------------------CeeeeeeeC
Confidence 001345799
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCC---CCCCCCCCHHHHHHHHHccccCC
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRIL---PPSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~l---pp~~~~~~p~l~dLi~~cL~~dP 570 (874)
+.|||||++.+..|+.++|||||||+||||++|..||.. .......+..... .+.....++.+.+||.+||++||
T Consensus 173 ~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP 252 (307)
T d1a06a_ 173 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDP 252 (307)
T ss_dssp CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSG
T ss_pred ccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCH
Confidence 999999999999999999999999999999999999843 2223344443222 23334567889999999999999
Q ss_pred CCCCChhHHhhhHHHHh
Q 002843 571 LSRPTTREILQSEVTNE 587 (874)
Q Consensus 571 ~~RPTa~EiL~hp~~~~ 587 (874)
++|||+.|+|+||||++
T Consensus 253 ~~R~s~~eil~hp~~~~ 269 (307)
T d1a06a_ 253 EKRFTCEQALQHPWIAG 269 (307)
T ss_dssp GGSCCHHHHHHSTTTTS
T ss_pred hHCcCHHHHhcCHhhCC
Confidence 99999999999999975
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.4e-40 Score=357.59 Aligned_cols=206 Identities=14% Similarity=0.093 Sum_probs=169.2
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.++.....+... +++||||.||+|..++...+ .+++.+++.|++|
T Consensus 61 ~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~----------------~iv~E~~~~g~l~~~~~~~~-~l~e~~~~~i~~q 123 (309)
T d1u5ra_ 61 DIIKEVRFLQKLRHPNTIQYRGCYLREHTA----------------WLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHG 123 (309)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEEETTEE----------------EEEEECCSEEHHHHHHHHTS-CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCEeeEEEEEEECCEE----------------EEEEEecCCCchHHHHHhCC-CCCHHHHHHHHHH
Confidence 355677888999999999999887655443 46999999999988877665 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||++|||||||||+||||+.++.+||+|||+++....
T Consensus 124 i~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~------------------------------------ 167 (309)
T d1u5ra_ 124 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------------------------------------ 167 (309)
T ss_dssp HHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS------------------------------------
T ss_pred HHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC------------------------------------
Confidence 99999999999999999999999999999999999999863220
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
....+||+.
T Consensus 168 -----------------------------------------------------------------------~~~~~GT~~ 176 (309)
T d1u5ra_ 168 -----------------------------------------------------------------------ANSFVGTPY 176 (309)
T ss_dssp -----------------------------------------------------------------------BCCCCSCGG
T ss_pred -----------------------------------------------------------------------CCccccCcc
Confidence 023479999
Q ss_pred ccCcccccC---CCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCC-CCCCCCHHHHHHHHHccccCCC
Q 002843 498 YASPEELSG---GVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPP-SFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 498 Y~APEvl~g---~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp-~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
|||||++.+ +.|+.++|||||||++|||++|..||... ...+..+.....++ .....++.+.+||.+||++||.
T Consensus 177 Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 256 (309)
T d1u5ra_ 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQ 256 (309)
T ss_dssp GCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGG
T ss_pred ccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChh
Confidence 999999965 45899999999999999999999998432 22233333333332 2234467899999999999999
Q ss_pred CCCChhHHhhhHHHHh
Q 002843 572 SRPTTREILQSEVTNE 587 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~~ 587 (874)
+|||+.|+|+||||..
T Consensus 257 ~Rpt~~ell~Hp~~~~ 272 (309)
T d1u5ra_ 257 DRPTSEVLLKHRFVLR 272 (309)
T ss_dssp GSCCHHHHTTCHHHHS
T ss_pred HCcCHHHHHhCHHhcC
Confidence 9999999999999974
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=3e-40 Score=365.89 Aligned_cols=241 Identities=19% Similarity=0.198 Sum_probs=189.4
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (874)
.|.||++.. .. .+...+.+.++.....+......+..++....||+++.+++....++..
T Consensus 42 fg~V~~a~~----~~-~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~--------------- 101 (352)
T d1koba_ 42 FGVVHRCVE----KA-TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEM--------------- 101 (352)
T ss_dssp TEEEEEEEE----TT-TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEE---------------
T ss_pred CeEEEEEEE----CC-CCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE---------------
Confidence 367888751 11 1233344445555455555556677888999999999999887755443
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEe--cCCcEEEeccccchhcc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL--QSNQVKYIGPIIQKETL 380 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~--~~~~vKLiDFGlar~~~ 380 (874)
+++||||+||+|.+++...+..+++.+++.|++||+.||+|||++|||||||||+||||+ .++.+||+|||+++.+.
T Consensus 102 -~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~ 180 (352)
T d1koba_ 102 -VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 180 (352)
T ss_dssp -EEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred -EEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecC
Confidence 459999999999999877666799999999999999999999999999999999999998 56899999999987433
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
..
T Consensus 181 ~~------------------------------------------------------------------------------ 182 (352)
T d1koba_ 181 PD------------------------------------------------------------------------------ 182 (352)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 00
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHH
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAA 538 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~ 538 (874)
.......||+.|+|||++.+..|+.++|||||||+||||+||..||.. ....
T Consensus 183 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~ 236 (352)
T d1koba_ 183 --------------------------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET 236 (352)
T ss_dssp --------------------------SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH
T ss_pred --------------------------CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 001355789999999999999999999999999999999999999843 2233
Q ss_pred HHHhhcCCC--C-CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 539 MSDLRDRIL--P-PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 539 ~~~l~~~~l--p-p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
+..+..... + +.+...++.+.+||.+||++||.+|||+.|+|+||||+..
T Consensus 237 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~ 289 (352)
T d1koba_ 237 LQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD 289 (352)
T ss_dssp HHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred HHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence 444444322 2 2334567889999999999999999999999999999864
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=3.8e-40 Score=364.82 Aligned_cols=242 Identities=19% Similarity=0.174 Sum_probs=186.2
Q ss_pred ceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (874)
.|.||++.. .. .+...+.+.+......+......+..++....||+++.++.....++..
T Consensus 39 fg~Vy~~~~----~~-~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~--------------- 98 (350)
T d1koaa2 39 FGVVHRVTE----RA-TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM--------------- 98 (350)
T ss_dssp TEEEEEEEE----TT-TTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEE---------------
T ss_pred CeEEEEEEE----CC-CCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE---------------
Confidence 366787751 11 1222333344443334445556677888888999999999887654443
Q ss_pred CceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEec--CCcEEEeccccchhcc
Q 002843 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ--SNQVKYIGPIIQKETL 380 (874)
Q Consensus 303 ~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~--~~~vKLiDFGlar~~~ 380 (874)
+++||||+||+|.++|......+++.+++.|++||+.||+|||++|||||||||+||||+. ++.+||+|||+++.+.
T Consensus 99 -~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~ 177 (350)
T d1koaa2 99 -VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 177 (350)
T ss_dssp -EEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECC
T ss_pred -EEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecc
Confidence 4699999999999999665447999999999999999999999999999999999999964 5789999999987433
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
..
T Consensus 178 ~~------------------------------------------------------------------------------ 179 (350)
T d1koaa2 178 PK------------------------------------------------------------------------------ 179 (350)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHH
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAA 538 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~ 538 (874)
.......||++|||||++.+..|+.++|||||||++|||++|..||.. ....
T Consensus 180 --------------------------~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~ 233 (350)
T d1koaa2 180 --------------------------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET 233 (350)
T ss_dssp --------------------------SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred --------------------------cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHH
Confidence 001356789999999999999999999999999999999999999842 2233
Q ss_pred HHHhhcCCC--C-CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 539 MSDLRDRIL--P-PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 539 ~~~l~~~~l--p-p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
+..+..... + ..+...++.+.+||.+||++||++|||+.|+|+||||+...
T Consensus 234 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~ 287 (350)
T d1koaa2 234 LRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 287 (350)
T ss_dssp HHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred HHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence 444444322 2 22234567899999999999999999999999999998654
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-40 Score=355.23 Aligned_cols=214 Identities=16% Similarity=0.130 Sum_probs=171.1
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.++.....+... +++||||+||+|.+++...+ .+++.+++.|+.|
T Consensus 54 ~~~~E~~il~~l~HpnIv~l~~~~~~~~~~----------------~ivmEy~~gg~L~~~~~~~~-~l~e~~~~~~~~q 116 (288)
T d1uu3a_ 54 YVTRERDVMSRLDHPFFVKLYFTFQDDEKL----------------YFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAE 116 (288)
T ss_dssp HHHHHHHHHHHCCSTTBCCEEEEEECSSEE----------------EEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCeeEEEEEEEECCEE----------------EEEEEccCCCCHHHhhhccC-CCCHHHHHHHHHH
Confidence 345566778888999999998886644443 46999999999999998876 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++|||||||||+|||++.++.+||+|||+|+.+.....
T Consensus 117 i~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~--------------------------------- 163 (288)
T d1uu3a_ 117 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--------------------------------- 163 (288)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-------------------------------------
T ss_pred HHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCc---------------------------------
Confidence 99999999999999999999999999999999999999875430000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......+||+.
T Consensus 164 --------------------------------------------------------------------~~~~~~~~GT~~ 175 (288)
T d1uu3a_ 164 --------------------------------------------------------------------QARANSFVGTAQ 175 (288)
T ss_dssp --------------------------------------------------------------------------CCCCGG
T ss_pred --------------------------------------------------------------------ccccccccCCcc
Confidence 000135689999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPT 575 (874)
|||||++.+..|+.++|||||||+||||++|..||.. ....+..+....+. .....++.+.+||.+||.+||++|||
T Consensus 176 Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dP~~R~t 254 (288)
T d1uu3a_ 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD-FPEKFFPKARDLVEKLLVLDATKRLG 254 (288)
T ss_dssp GCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCC-CCTTCCHHHHHHHHTTSCSSGGGSTT
T ss_pred ccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCC-CCccCCHHHHHHHHHHccCCHhHCcC
Confidence 9999999999999999999999999999999999843 22334444433221 11235688999999999999999999
Q ss_pred hhHH------hhhHHHHhhHh
Q 002843 576 TREI------LQSEVTNEFQE 590 (874)
Q Consensus 576 a~Ei------L~hp~~~~~~~ 590 (874)
+.|+ ++||||+++.+
T Consensus 255 ~~e~~~~~~i~~Hpff~~i~w 275 (288)
T d1uu3a_ 255 CEEMEGYGPLKAHPFFESVTW 275 (288)
T ss_dssp SGGGTCHHHHHTSGGGTTCCC
T ss_pred HHHHcCCHHHHcCCccCCCCH
Confidence 9985 67888877653
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-39 Score=357.55 Aligned_cols=213 Identities=15% Similarity=0.136 Sum_probs=174.6
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..+++...||+++.+......+... +++||||+||+|.+++.+.+ .+++.+++.|+.
T Consensus 50 ~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~----------------~iv~ey~~gg~L~~~~~~~~-~~~e~~~~~~~~ 112 (337)
T d1o6la_ 50 AHTVTESRVLQNTRHPFLTALKYAFQTHDRL----------------CFVMEYANGGELFFHLSRER-VFTEERARFYGA 112 (337)
T ss_dssp HHHHHHHHHHHSCCCTTBCCEEEEEECSSEE----------------EEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeeecccccc----------------ccceeccCCCchhhhhhccc-CCcHHHHHHHHH
Confidence 3455677788889999999999887755443 45999999999999998876 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++|||||||||+|||++.+|.+||+|||+++......
T Consensus 113 qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~--------------------------------- 159 (337)
T d1o6la_ 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--------------------------------- 159 (337)
T ss_dssp HHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT---------------------------------
T ss_pred HHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCC---------------------------------
Confidence 99999999999999999999999999999999999999987432000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
......+||+
T Consensus 160 ----------------------------------------------------------------------~~~~~~~GT~ 169 (337)
T d1o6la_ 160 ----------------------------------------------------------------------ATMKTFCGTP 169 (337)
T ss_dssp ----------------------------------------------------------------------CCBCCCEECG
T ss_pred ----------------------------------------------------------------------cccccceeCH
Confidence 0013568999
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP 574 (874)
+|+|||++.+..|+.++|||||||+||||++|.+||.. .......+....+ +-....++.+.+||.+||.+||.+||
T Consensus 170 ~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~dli~~~L~~dP~~R~ 248 (337)
T d1o6la_ 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPKQRL 248 (337)
T ss_dssp GGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred HHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCC-CCCccCCHHHHHHHHhhccCCchhhc
Confidence 99999999999999999999999999999999999843 2223333333222 11223568899999999999999999
Q ss_pred C-----hhHHhhhHHHHhhHh
Q 002843 575 T-----TREILQSEVTNEFQE 590 (874)
Q Consensus 575 T-----a~EiL~hp~~~~~~~ 590 (874)
+ +.|+++||||+++.+
T Consensus 249 ~~~~~~~~eil~Hp~f~~i~~ 269 (337)
T d1o6la_ 249 GGGPSDAKEVMEHRFFLSINW 269 (337)
T ss_dssp TCSTTTHHHHHTSGGGTTCCH
T ss_pred ccccccHHHHHcCcccccCCH
Confidence 4 899999999987654
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-39 Score=344.27 Aligned_cols=217 Identities=13% Similarity=0.040 Sum_probs=172.6
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYI 334 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I 334 (874)
.......+..++....||+++.++.....+ . .+++||||+||+|.+++.+.. .+++.+++.|
T Consensus 51 ~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~----------------~~lvmE~~~~g~L~~~l~~~~-~l~~~~~~~i 112 (277)
T d1xbba_ 51 LKDELLAEANVMQQLDNPYIVRMIGICEAE-S----------------WMLVMEMAELGPLNKYLQQNR-HVKDKNIIEL 112 (277)
T ss_dssp HHHHHHHHHHHHHTCCCTTBCCEEEEEESS-S----------------EEEEEECCTTEEHHHHHHHCT-TCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEeccC-C----------------EEEEEEcCCCCcHHHHHhhcc-CCCHHHHHHH
Confidence 344567778888999999999998764321 1 257999999999999998876 7999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||+|||++|||||||||+|||++.++.+|++|||+++.+.....
T Consensus 113 ~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~------------------------------ 162 (277)
T d1xbba_ 113 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN------------------------------ 162 (277)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS------------------------------
T ss_pred HHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhcccccc------------------------------
Confidence 99999999999999999999999999999999999999999874330000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
.........|
T Consensus 163 ----------------------------------------------------------------------~~~~~~~~~g 172 (277)
T d1xbba_ 163 ----------------------------------------------------------------------YYKAQTHGKW 172 (277)
T ss_dssp ----------------------------------------------------------------------EEEC----CC
T ss_pred ----------------------------------------------------------------------ccccccccCC
Confidence 0000134578
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
|+.|||||++.+..|+.++|||||||++|||+| |..||.. .......+..+..++.....++.+.+||.+||+.||+
T Consensus 173 t~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~ 252 (277)
T d1xbba_ 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVE 252 (277)
T ss_dssp CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTT
T ss_pred CceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCCHh
Confidence 899999999999999999999999999999998 8999853 2334455555554444455668899999999999999
Q ss_pred CCCChhHH---hhhHHHHhhH
Q 002843 572 SRPTTREI---LQSEVTNEFQ 589 (874)
Q Consensus 572 ~RPTa~Ei---L~hp~~~~~~ 589 (874)
+|||+.+| |+|+|++.+.
T Consensus 253 ~RPs~~~i~~~L~~~~~~~~~ 273 (277)
T d1xbba_ 253 NRPGFAAVELRLRNYYYDVVN 273 (277)
T ss_dssp TSCCHHHHHHHHHHHHHHHHH
T ss_pred HCcCHHHHHHHhhCHHhhcCC
Confidence 99999998 4666665444
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.4e-39 Score=358.87 Aligned_cols=209 Identities=17% Similarity=0.151 Sum_probs=168.1
Q ss_pred HHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHH
Q 002843 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (874)
Q Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~a 341 (874)
+..++....||+++.++.....++.. +++||||+||+|.++|.+.+ .+++.+++.|+.||+.|
T Consensus 57 ~~~~l~~~~hpnIv~l~~~~~~~~~~----------------~ivmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~a 119 (364)
T d1omwa3 57 MLSLVSTGDCPFIVCMSYAFHTPDKL----------------SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILG 119 (364)
T ss_dssp HHHHHSSSCCTTBCCEEEEEECSSEE----------------EEEECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCcEEEEEEEEEECCEE----------------EEEEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHH
Confidence 34677778899999998887654443 46999999999999998876 79999999999999999
Q ss_pred HHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccc
Q 002843 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (874)
Q Consensus 342 L~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~ 421 (874)
|+|||++|||||||||+||||+.++.+||+|||+++.+...
T Consensus 120 L~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~--------------------------------------- 160 (364)
T d1omwa3 120 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--------------------------------------- 160 (364)
T ss_dssp HHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSS---------------------------------------
T ss_pred HHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCC---------------------------------------
Confidence 99999999999999999999999999999999998743200
Q ss_pred ccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCc
Q 002843 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (874)
Q Consensus 422 ~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~AP 501 (874)
.....+||+.|+||
T Consensus 161 ------------------------------------------------------------------~~~~~~GT~~y~AP 174 (364)
T d1omwa3 161 ------------------------------------------------------------------KPHASVGTHGYMAP 174 (364)
T ss_dssp ------------------------------------------------------------------CCCSCCSCGGGCCH
T ss_pred ------------------------------------------------------------------cccccccccccchh
Confidence 00245799999999
Q ss_pred ccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHHH-HHHHhhc--CCCCCC-CCCCCHHHHHHHHHccccCCCCCCC-
Q 002843 502 EELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALAA-AMSDLRD--RILPPS-FLSENPKEAGFCLWQLHPEPLSRPT- 575 (874)
Q Consensus 502 Evl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~~-~~~~l~~--~~lpp~-~~~~~p~l~dLi~~cL~~dP~~RPT- 575 (874)
|++.. ..|+.++|||||||+||||++|..||..... ....+.. ...++. ....++.+.+||.+||.+||++|||
T Consensus 175 E~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~ 254 (364)
T d1omwa3 175 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGC 254 (364)
T ss_dssp HHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTT
T ss_pred HHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCC
Confidence 99975 4689999999999999999999999843210 0111111 111222 2345688999999999999999999
Q ss_pred ----hhHHhhhHHHHhhHhhh
Q 002843 576 ----TREILQSEVTNEFQEVC 592 (874)
Q Consensus 576 ----a~EiL~hp~~~~~~~~~ 592 (874)
+.|+|+||||+++.+..
T Consensus 255 ~~~~a~eil~Hp~f~~i~~~~ 275 (364)
T d1omwa3 255 LGRGAQEVKESPFFRSLDWQM 275 (364)
T ss_dssp SSSTHHHHHTSGGGTTCCHHH
T ss_pred cccCHHHHHcCccccCCCHHH
Confidence 79999999999876543
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-39 Score=352.16 Aligned_cols=210 Identities=12% Similarity=0.099 Sum_probs=166.0
Q ss_pred HHHHHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-----------
Q 002843 256 AALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG----------- 323 (874)
Q Consensus 256 ~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~----------- 323 (874)
......+...+... .||+++.++.....++.. +++||||+||+|.++|+...
T Consensus 84 ~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~----------------~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~ 147 (325)
T d1rjba_ 84 REALMSELKMMTQLGSHENIVNLLGACTLSGPI----------------YLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 147 (325)
T ss_dssp CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC----------------EEEEECCTTCBHHHHHHTTTTCC--------
T ss_pred HHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE----------------EEEEEcCCCCcHHHHHHhccCCCcchhhhhc
Confidence 34455555555554 899999999886644432 46999999999999997643
Q ss_pred -----------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchh
Q 002843 324 -----------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSEN 392 (874)
Q Consensus 324 -----------~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~ 392 (874)
..+++.+++.|+.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.......
T Consensus 148 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~-------- 219 (325)
T d1rjba_ 148 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN-------- 219 (325)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT--------
T ss_pred cccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCCc--------
Confidence 2489999999999999999999999999999999999999999999999999974331000
Q ss_pred hhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCC
Q 002843 393 YRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSK 472 (874)
Q Consensus 393 ~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~ 472 (874)
T Consensus 220 -------------------------------------------------------------------------------- 219 (325)
T d1rjba_ 220 -------------------------------------------------------------------------------- 219 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH---HHHHHHhhcCCCC
Q 002843 473 SSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL---AAAMSDLRDRILP 548 (874)
Q Consensus 473 s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~---~~~~~~l~~~~lp 548 (874)
....+...||+.|||||++.++.|+.++|||||||+||||+| |.+||... ......+.....+
T Consensus 220 -------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~ 286 (325)
T d1rjba_ 220 -------------YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKM 286 (325)
T ss_dssp -------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCC
T ss_pred -------------eeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC
Confidence 000135578999999999999999999999999999999997 89988532 2223344444444
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 549 PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 549 p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+.....++.+.+||.+||+.||++|||+.||++|
T Consensus 287 ~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 287 DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 4444556789999999999999999999999987
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-39 Score=348.32 Aligned_cols=213 Identities=15% Similarity=0.171 Sum_probs=172.1
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.+++....+... +++||||+||+|.++|.+.+ .+++.+++.|++
T Consensus 58 ~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~----------------~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~ 120 (293)
T d1jksa_ 58 EDIEREVSILKEIQHPNVITLHEVYENKTDV----------------ILILELVAGGELFDFLAEKE-SLTEEEATEFLK 120 (293)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEEECSSEE----------------EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEEECCEE----------------EEEEEcCCCccccchhcccc-ccchhHHHHHHH
Confidence 4455677788888999999999887654443 46999999999999998776 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCC----cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSN----QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~----~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~ 412 (874)
||+.||+|||++|||||||||+|||++.++ .+|++|||+++.....
T Consensus 121 qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~------------------------------ 170 (293)
T d1jksa_ 121 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------------------------------ 170 (293)
T ss_dssp HHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTS------------------------------
T ss_pred HHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCC------------------------------
Confidence 999999999999999999999999998776 5999999998643200
Q ss_pred hhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccc
Q 002843 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (874)
Q Consensus 413 k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~ 492 (874)
......
T Consensus 171 --------------------------------------------------------------------------~~~~~~ 176 (293)
T d1jksa_ 171 --------------------------------------------------------------------------NEFKNI 176 (293)
T ss_dssp --------------------------------------------------------------------------CBCSCC
T ss_pred --------------------------------------------------------------------------cccccc
Confidence 001345
Q ss_pred cccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCC--C-CCCCCCHHHHHHHHHccc
Q 002843 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILP--P-SFLSENPKEAGFCLWQLH 567 (874)
Q Consensus 493 ~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lp--p-~~~~~~p~l~dLi~~cL~ 567 (874)
.||+.|+|||++.+..|+.++|||||||+||||++|..||.. ....+..+...... + .+...++.+.+||.+||+
T Consensus 177 ~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~ 256 (293)
T d1jksa_ 177 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 256 (293)
T ss_dssp CCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSC
T ss_pred CCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHcc
Confidence 788999999999998999999999999999999999999842 23334444443222 1 123456788999999999
Q ss_pred cCCCCCCChhHHhhhHHHHhhHh
Q 002843 568 PEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 568 ~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
+||++|||+.|+|+||||+....
T Consensus 257 ~dP~~R~s~~eil~hp~~~~~~~ 279 (293)
T d1jksa_ 257 KDPKKRMTIQDSLQHPWIKPKDT 279 (293)
T ss_dssp SSGGGSCCHHHHHHSTTTCC---
T ss_pred CChhHCcCHHHHhcCcccCCCCh
Confidence 99999999999999999986543
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.2e-39 Score=350.17 Aligned_cols=210 Identities=13% Similarity=0.107 Sum_probs=173.9
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..+++...||+++.++.....++.. +++||||+||+|..++.... .+++.+++.|+.|
T Consensus 50 ~~~~E~~il~~l~HpnIv~~~~~~~~~~~~----------------~ivmE~~~gg~l~~~~~~~~-~~~~~~~~~~~~q 112 (316)
T d1fota_ 50 HTNDERLMLSIVTHPFIIRMWGTFQDAQQI----------------FMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAE 112 (316)
T ss_dssp HHHHHHHHHHSCCBTTBCCEEEEEECSSEE----------------EEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCcChhheeeeEeeCCee----------------eeEeeecCCccccccccccc-cccccHHHHHHHH
Confidence 345677788999999999999987755443 45999999999999998876 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++|||||||||+||||+.++.+||+|||+++...+
T Consensus 113 i~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~------------------------------------ 156 (316)
T d1fota_ 113 VCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD------------------------------------ 156 (316)
T ss_dssp HHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS------------------------------------
T ss_pred HHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEecc------------------------------------
Confidence 99999999999999999999999999999999999999874320
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.....+||+.
T Consensus 157 ----------------------------------------------------------------------~~~~~~Gt~~ 166 (316)
T d1fota_ 157 ----------------------------------------------------------------------VTYTLCGTPD 166 (316)
T ss_dssp ----------------------------------------------------------------------CBCCCCSCTT
T ss_pred ----------------------------------------------------------------------ccccccCccc
Confidence 0024579999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC-
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP- 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP- 574 (874)
|||||++.+..|+.++|||||||+||||++|..||... ...+..+.....+ .....++.+.+++.+||.+||.+||
T Consensus 167 Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dp~~R~~ 245 (316)
T d1fota_ 167 YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELR-FPPFFNEDVKDLLSRLITRDLSQRLG 245 (316)
T ss_dssp TCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSCTTTCTT
T ss_pred ccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhhCHHhccc
Confidence 99999999999999999999999999999999998432 2233344332221 1123457899999999999999996
Q ss_pred ----ChhHHhhhHHHHhhHhh
Q 002843 575 ----TTREILQSEVTNEFQEV 591 (874)
Q Consensus 575 ----Ta~EiL~hp~~~~~~~~ 591 (874)
|++++|+||||+++.+.
T Consensus 246 ~~r~t~~~il~Hp~f~~i~~~ 266 (316)
T d1fota_ 246 NLQNGTEDVKNHPWFKEVVWE 266 (316)
T ss_dssp SSTTTTHHHHTSGGGSSCCHH
T ss_pred cchhhHHHHHcCcccccCCHH
Confidence 99999999999987654
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-39 Score=345.40 Aligned_cols=246 Identities=13% Similarity=0.028 Sum_probs=185.3
Q ss_pred CceEEEecCCCCcccccccccccccccccC-CChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCcccc
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (874)
|.|.||+|.+... -.....+++.++.. .+.+......+..++....||+++.++.....+.
T Consensus 21 ~fg~Vy~~~~~~~---~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~--------------- 82 (285)
T d1u59a_ 21 NFGSVRQGVYRMR---KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA--------------- 82 (285)
T ss_dssp TTEEEEEEEEC------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSS---------------
T ss_pred cCeEEEEEEEecC---CCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCe---------------
Confidence 4477888852100 01112233333332 2333445667788889999999999987644221
Q ss_pred CCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 301 ~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
.+++||||+||+|.+++......+++.+++.|+.||+.||+|||++|||||||||+|||++.++.+||+|||+++.+.
T Consensus 83 --~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~ 160 (285)
T d1u59a_ 83 --LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 160 (285)
T ss_dssp --EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred --EEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhccc
Confidence 257999999999999997765589999999999999999999999999999999999999999999999999997543
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
....
T Consensus 161 ~~~~---------------------------------------------------------------------------- 164 (285)
T d1u59a_ 161 ADDS---------------------------------------------------------------------------- 164 (285)
T ss_dssp TCSC----------------------------------------------------------------------------
T ss_pred cccc----------------------------------------------------------------------------
Confidence 1000
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHH
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAA 537 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~ 537 (874)
.........||+.|+|||++.++.|+.++|||||||+||||+| |..||.. ...
T Consensus 165 ------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~ 220 (285)
T d1u59a_ 165 ------------------------YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 220 (285)
T ss_dssp ------------------------EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH
T ss_pred ------------------------ccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHH
Confidence 0000134568899999999999999999999999999999998 8999853 233
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHH---hhhHHHHh
Q 002843 538 AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI---LQSEVTNE 587 (874)
Q Consensus 538 ~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~Ei---L~hp~~~~ 587 (874)
.+..+..+..++.....++.+.+||.+||+.||++|||+.+| |+|+|++-
T Consensus 221 ~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~ 273 (285)
T d1u59a_ 221 VMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 273 (285)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 455566655555445566889999999999999999999888 56676653
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.2e-39 Score=342.26 Aligned_cols=235 Identities=16% Similarity=0.095 Sum_probs=175.5
Q ss_pred CceEEEecCCCCcccccccccccccccccCC--ChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccc
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (874)
|+|.||+|.... ..+.+.++... +........+..++....||+++.++.... +..
T Consensus 20 ~fg~Vy~~~~~~--------~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~------------- 77 (276)
T d1uwha_ 20 SFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQ------------- 77 (276)
T ss_dssp SSCEEEEEESSS--------EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS-------------
T ss_pred CCcEEEEEEECC--------EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccE-------------
Confidence 346678776321 12333333322 223344556778888999999998876432 111
Q ss_pred cCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhc
Q 002843 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (874)
Q Consensus 300 ~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~ 379 (874)
.+++||||+||+|.++|...+..+++.+++.|+.||+.||+|||++|||||||||+||||+.++.+||+|||+++..
T Consensus 78 ---~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~ 154 (276)
T d1uwha_ 78 ---LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 154 (276)
T ss_dssp ---CEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC-
T ss_pred ---EEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeec
Confidence 25799999999999999876657999999999999999999999999999999999999999999999999998743
Q ss_pred cccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCc
Q 002843 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (874)
Q Consensus 380 ~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~ 459 (874)
.....
T Consensus 155 ~~~~~--------------------------------------------------------------------------- 159 (276)
T d1uwha_ 155 SRWSG--------------------------------------------------------------------------- 159 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCC---------------------------------------------------------------------------
Confidence 30000
Q ss_pred ccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC---CCCCCccchhHHHHHHHHhcCCCCchHH--
Q 002843 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLFFELFGRFDSERA-- 534 (874)
Q Consensus 460 ~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g---~~ys~kSDIwSLGVIL~ELltG~~p~~~-- 534 (874)
........||+.|||||++.+ .+|+.++|||||||+||||+||..||..
T Consensus 160 --------------------------~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~ 213 (276)
T d1uwha_ 160 --------------------------SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213 (276)
T ss_dssp --------------------------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred --------------------------cccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCC
Confidence 001135678999999999975 3589999999999999999999999853
Q ss_pred -HHHHHHHhhcCCCCCCC----CCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 535 -LAAAMSDLRDRILPPSF----LSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 535 -~~~~~~~l~~~~lpp~~----~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
.......+.....+|.. ....+.+.+||.+||+.||.+|||+.||+++
T Consensus 214 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 214 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp CHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 23334445555544432 2345679999999999999999999999987
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.5e-38 Score=344.45 Aligned_cols=212 Identities=13% Similarity=0.105 Sum_probs=164.4
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..+++...||+++.++.....++.. +++||||+||+|.+++......+++.+++.|+.
T Consensus 72 ~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~----------------~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~ 135 (299)
T d1jpaa_ 72 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPV----------------MIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR 135 (299)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEEEECSSSSC----------------EEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCccEEEEEeeCCEE----------------EEEEEecCCCcceeeeccccCCCCHHHHHHHHH
Confidence 3466778899999999999999876543332 569999999999999988666899999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++|||||||||+||||+.++.+||+|||+++.+.....
T Consensus 136 qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~-------------------------------- 183 (299)
T d1jpaa_ 136 GIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS-------------------------------- 183 (299)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------------------------------------
T ss_pred HHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCC--------------------------------
Confidence 999999999999999999999999999999999999999985441100
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
. ..........||+
T Consensus 184 ------------------------~------------------------------------------~~~~~~~~~~~t~ 197 (299)
T d1jpaa_ 184 ------------------------D------------------------------------------PTYTSALGGKIPI 197 (299)
T ss_dssp ------------------------------------------------------------------------------CG
T ss_pred ------------------------c------------------------------------------ceeeecccccCCc
Confidence 0 0000012446889
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|||||++.++.|+.++|||||||+||||+| |..||.. ....+..+.....++......+.+.+||.+||+.||++|
T Consensus 198 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R 277 (299)
T d1jpaa_ 198 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHR 277 (299)
T ss_dssp GGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTS
T ss_pred cccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHC
Confidence 9999999999999999999999999999998 8888843 233455565555555555667889999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
||+.||+++
T Consensus 278 Ps~~ei~~~ 286 (299)
T d1jpaa_ 278 PKFGQIVNT 286 (299)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 999999876
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.1e-38 Score=352.97 Aligned_cols=210 Identities=14% Similarity=0.069 Sum_probs=173.9
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.++.....+... +++||||.||+|.+++.+.+ .+++.+++.|+.|
T Consensus 87 ~~~~E~~il~~l~hpnIv~~~~~~~~~~~~----------------~~v~e~~~~g~l~~~l~~~~-~l~e~~~~~i~~q 149 (350)
T d1rdqe_ 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNL----------------YMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQ 149 (350)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEECSSEE----------------EEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcEeeccccccccccc----------------ccccccccccchhhhHhhcC-CCCHHHHHHHHHH
Confidence 345666788899999999998876654443 35999999999999998876 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||++|||||||||+||||+.++.+||+|||+++.+..
T Consensus 150 i~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~------------------------------------ 193 (350)
T d1rdqe_ 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------------------------------------ 193 (350)
T ss_dssp HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS------------------------------------
T ss_pred HHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeeccc------------------------------------
Confidence 99999999999999999999999999999999999999874320
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
......||+.
T Consensus 194 ----------------------------------------------------------------------~~~~~~Gt~~ 203 (350)
T d1rdqe_ 194 ----------------------------------------------------------------------RTWTLCGTPE 203 (350)
T ss_dssp ----------------------------------------------------------------------CBCCCEECGG
T ss_pred ----------------------------------------------------------------------ccccccCccc
Confidence 0024579999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCC-
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP- 574 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RP- 574 (874)
|||||++.+..|+.++|||||||+||||++|..||... ...+..+.....+ .....++.+.+||.+||++||.+|+
T Consensus 204 Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dP~kR~~ 282 (350)
T d1rdqe_ 204 ALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKDLLRNLLQVDLTKRFG 282 (350)
T ss_dssp GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCTTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred cCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCC-CCccCCHHHHHHHHHHhhhCHHhccc
Confidence 99999999999999999999999999999999998432 2233444433221 1234567899999999999999994
Q ss_pred ----ChhHHhhhHHHHhhHhh
Q 002843 575 ----TTREILQSEVTNEFQEV 591 (874)
Q Consensus 575 ----Ta~EiL~hp~~~~~~~~ 591 (874)
|+.|||+||||+.+.+.
T Consensus 283 ~~r~t~~ell~Hp~f~~~~~~ 303 (350)
T d1rdqe_ 283 NLKNGVNDIKNHKWFATTDWI 303 (350)
T ss_dssp SSTTTTHHHHTSGGGTTCCHH
T ss_pred cccccHHHHHcCccccCCCHH
Confidence 99999999999987544
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-39 Score=350.43 Aligned_cols=207 Identities=16% Similarity=0.133 Sum_probs=170.0
Q ss_pred HhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Q 002843 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (874)
Q Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL 342 (874)
..+.....||+++.++.....++.. +++||||+||+|.++|...+ .+++.+++.|+.||+.||
T Consensus 54 ~~l~~~~~hp~Iv~~~~~~~~~~~~----------------yivmEy~~~g~L~~~i~~~~-~~~e~~~~~~~~qi~~al 116 (320)
T d1xjda_ 54 RVLSLAWEHPFLTHMFCTFQTKENL----------------FFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGL 116 (320)
T ss_dssp HHHHHHTTCTTBCCEEEEEECSSEE----------------EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCcEEEEEEEEccCCce----------------eEEEeecCCCcHHHHhhccC-CCCHHHHHHHHHHHHHHH
Confidence 3455678999999999987765554 45999999999999998776 799999999999999999
Q ss_pred HHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccc
Q 002843 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (874)
Q Consensus 343 ~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~ 422 (874)
+|||++|||||||||+|||++.++++||+|||+++.....
T Consensus 117 ~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~---------------------------------------- 156 (320)
T d1xjda_ 117 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG---------------------------------------- 156 (320)
T ss_dssp HHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT----------------------------------------
T ss_pred HHHHhCCeeeccCcccceeecCCCceeccccchhhhcccc----------------------------------------
Confidence 9999999999999999999999999999999998743200
Q ss_pred cccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcc
Q 002843 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (874)
Q Consensus 423 s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APE 502 (874)
....+...||+.|+|||
T Consensus 157 ---------------------------------------------------------------~~~~~~~~gt~~y~aPE 173 (320)
T d1xjda_ 157 ---------------------------------------------------------------DAKTNTFCGTPDYIAPE 173 (320)
T ss_dssp ---------------------------------------------------------------TCCBCCCCSCGGGCCHH
T ss_pred ---------------------------------------------------------------cccccccCCCCCcCCHH
Confidence 00013457999999999
Q ss_pred cccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChh-HH
Q 002843 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR-EI 579 (874)
Q Consensus 503 vl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~-Ei 579 (874)
++.+..|+.++|||||||++|||++|..||.. ....+..+..... ......++.+.+||.+||.+||++||++. |+
T Consensus 174 ~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l 252 (320)
T d1xjda_ 174 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP-FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDI 252 (320)
T ss_dssp HHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCG
T ss_pred HHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCCccCCHHHHHHHHHhcccCCCCCcCHHHHH
Confidence 99999999999999999999999999999843 2333444443321 11123468899999999999999999995 89
Q ss_pred hhhHHHHhhHh
Q 002843 580 LQSEVTNEFQE 590 (874)
Q Consensus 580 L~hp~~~~~~~ 590 (874)
++||||+++..
T Consensus 253 ~~hpff~~~~~ 263 (320)
T d1xjda_ 253 RQHPLFREINW 263 (320)
T ss_dssp GGSGGGTTCCH
T ss_pred HhCchhccCCH
Confidence 99999998654
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-38 Score=333.60 Aligned_cols=214 Identities=15% Similarity=0.094 Sum_probs=165.7
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYI 334 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I 334 (874)
.......+..++....||+++.++.....++.. +++||||++|+|.+++......+++..++.|
T Consensus 43 ~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~----------------~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i 106 (263)
T d1sm2a_ 43 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI----------------CLVFEFMEHGCLSDYLRTQRGLFAAETLLGM 106 (263)
T ss_dssp CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC----------------EEEEECCTTCBHHHHHHTTTTCCCHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCCCcccccceeccCCce----------------EEEEEecCCCcHHHHhhccccCCCHHHHHHH
Confidence 344566777888899999999999886644332 5699999999999999877668999999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhh
Q 002843 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (874)
Q Consensus 335 ~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~ 414 (874)
+.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.......
T Consensus 107 ~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~------------------------------ 156 (263)
T d1sm2a_ 107 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY------------------------------ 156 (263)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC----------------------------------------
T ss_pred HHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCc------------------------------
Confidence 99999999999999999999999999999999999999999874431000
Q ss_pred hhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccc
Q 002843 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (874)
Q Consensus 415 ~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~G 494 (874)
.......|
T Consensus 157 ------------------------------------------------------------------------~~~~~~~g 164 (263)
T d1sm2a_ 157 ------------------------------------------------------------------------TSSTGTKF 164 (263)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------------------eeecceec
Confidence 00024578
Q ss_pred cccccCcccccCCCCCCccchhHHHHHHHHhcCC-CCchH--HHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCC
Q 002843 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR-FDSER--ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPL 571 (874)
Q Consensus 495 T~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG-~~p~~--~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~ 571 (874)
|+.|+|||++.+..|+.++|||||||+||||+|+ .+|+. .....+..+.....++.....++.+.+|+.+||++||+
T Consensus 165 t~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~ 244 (263)
T d1sm2a_ 165 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPE 244 (263)
T ss_dssp CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred CcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHccCCHh
Confidence 8999999999999999999999999999999995 55553 22334455555444444445567899999999999999
Q ss_pred CCCChhHHhhhHHHHhh
Q 002843 572 SRPTTREILQSEVTNEF 588 (874)
Q Consensus 572 ~RPTa~EiL~hp~~~~~ 588 (874)
+|||++|||+| ++.+
T Consensus 245 ~Rps~~~il~~--L~~i 259 (263)
T d1sm2a_ 245 DRPAFSRLLRQ--LAEI 259 (263)
T ss_dssp GSCCHHHHHHH--HHHH
T ss_pred HCcCHHHHHHH--HHHH
Confidence 99999999987 5444
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-38 Score=350.87 Aligned_cols=207 Identities=20% Similarity=0.238 Sum_probs=161.0
Q ss_pred hHHhhcCCCCCceeccceee--cCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHH
Q 002843 264 MMVASNASPKPVGVGTAVVS--NGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVA 340 (874)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~ 340 (874)
.+++...||+++.+++.... ..... -+++||||+||+|.++|.+.+ ..+++.+++.|++||+.
T Consensus 57 ~~~~~~~hpnIv~l~~~~~~~~~~~~~--------------~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~ 122 (335)
T d2ozaa1 57 LHWRASQCPHIVRIVDVYENLYAGRKC--------------LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 122 (335)
T ss_dssp HHHHHTTSTTBCCEEEEEEEEETTEEE--------------EEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCeEEEEEeecccCCCE--------------EEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHH
Confidence 45667789999998876542 11111 267999999999999998753 47999999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEec---CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQ---SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~---~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
||+|||++||+||||||+|||++. .+.+||+|||+++.....
T Consensus 123 al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~----------------------------------- 167 (335)
T d2ozaa1 123 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH----------------------------------- 167 (335)
T ss_dssp HHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCC-----------------------------------
T ss_pred HHHHHHHcCCccccccccccccccccccccccccccceeeeccCC-----------------------------------
Confidence 999999999999999999999986 457999999998743300
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
......+||+.
T Consensus 168 ---------------------------------------------------------------------~~~~~~~gt~~ 178 (335)
T d2ozaa1 168 ---------------------------------------------------------------------NSLTTPCYTPY 178 (335)
T ss_dssp ---------------------------------------------------------------------CCCCCCSCCCS
T ss_pred ---------------------------------------------------------------------CccccccCCcc
Confidence 00134579999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCCC------C-CCCCCCCHHHHHHHHHcccc
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRIL------P-PSFLSENPKEAGFCLWQLHP 568 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~l------p-p~~~~~~p~l~dLi~~cL~~ 568 (874)
|||||++.+..|+.++|||||||+||||+||..||.... .....+...+. | +.+...++.+.+||.+||++
T Consensus 179 y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~ 258 (335)
T d2ozaa1 179 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 258 (335)
T ss_dssp SCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCS
T ss_pred cCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccC
Confidence 999999999899999999999999999999999985421 11122222111 1 11123457789999999999
Q ss_pred CCCCCCChhHHhhhHHHHhh
Q 002843 569 EPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 569 dP~~RPTa~EiL~hp~~~~~ 588 (874)
||++|||+.|+|+||||...
T Consensus 259 dP~~R~s~~eil~hp~~~~~ 278 (335)
T d2ozaa1 259 EPTQRMTITEFMNHPWIMQS 278 (335)
T ss_dssp STTTSCCHHHHHHSHHHHTT
T ss_pred ChhHCcCHHHHHcCHHhhCC
Confidence 99999999999999999753
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-38 Score=340.04 Aligned_cols=204 Identities=17% Similarity=0.137 Sum_probs=155.2
Q ss_pred HhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------------CCCC
Q 002843 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGK 327 (874)
Q Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---------------~~ls 327 (874)
..+.....|++++.+......++.. .+++||||+||+|.++|.... ..++
T Consensus 68 ~~l~~~~~h~~iv~~~~~~~~~~~~---------------~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 132 (299)
T d1ywna1 68 KILIHIGHHLNVVNLLGACTKPGGP---------------LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132 (299)
T ss_dssp HHHHHHCCCTTBCCEEEEECSTTSC---------------CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBC
T ss_pred HHHHhhcCCCeEEEeeeeeccCCCe---------------EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCC
Confidence 3455555677777766654433221 257999999999999997532 2589
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccc
Q 002843 328 RIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTT 407 (874)
Q Consensus 328 e~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~ 407 (874)
+.+++.|+.||+.||+|||++|||||||||+||||+.++.+||+|||+++.......
T Consensus 133 ~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~----------------------- 189 (299)
T d1ywna1 133 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD----------------------- 189 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------CCSCTT-----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhhcccccc-----------------------
Confidence 999999999999999999999999999999999999999999999999974330000
Q ss_pred cchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccc
Q 002843 408 GIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQST 487 (874)
Q Consensus 408 ~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~ 487 (874)
..
T Consensus 190 ------------------------------------------------------------------------------~~ 191 (299)
T d1ywna1 190 ------------------------------------------------------------------------------YV 191 (299)
T ss_dssp ------------------------------------------------------------------------------SC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred ccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCC-CCchHH---HHHHHHHhhcCCCCCCCCCCCHHHHHHHH
Q 002843 488 SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR-FDSERA---LAAAMSDLRDRILPPSFLSENPKEAGFCL 563 (874)
Q Consensus 488 ~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG-~~p~~~---~~~~~~~l~~~~lpp~~~~~~p~l~dLi~ 563 (874)
..+...||+.|+|||++.+..|+.++|||||||++|||++| .+||.. .......+..+..++.....++.+.+||.
T Consensus 192 ~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 271 (299)
T d1ywna1 192 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 271 (299)
T ss_dssp CTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHH
T ss_pred ccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHH
Confidence 01356799999999999999999999999999999999986 456643 22334455555555555556788999999
Q ss_pred HccccCCCCCCChhHHhhh
Q 002843 564 WQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 564 ~cL~~dP~~RPTa~EiL~h 582 (874)
+||+.||++|||+.||++|
T Consensus 272 ~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 272 DCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHcCCChhHCcCHHHHHHH
Confidence 9999999999999999987
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-38 Score=340.94 Aligned_cols=211 Identities=14% Similarity=0.108 Sum_probs=164.7
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....||+++.++.....++.. +++||||.|+++..++.... .+++.+++.|++||
T Consensus 47 ~~~Ei~il~~l~hpnIv~~~~~~~~~~~~----------------~ivmE~~~~~~~~~~~~~~~-~l~~~~~~~~~~qi 109 (299)
T d1ua2a_ 47 ALREIKLLQELSHPNIIGLLDAFGHKSNI----------------SLVFDFMETDLEVIIKDNSL-VLTPSHIKAYMLMT 109 (299)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEECCTTCC----------------EEEEECCSEEHHHHHTTCCS-SCCSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEeEEEeeeccCCce----------------eehhhhhcchHHhhhhhccc-CCCHHHHHHHHHHH
Confidence 45566788888999999999887655443 46999999887776655444 79999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
+.||+|||++|||||||||+|||++.++.+||+|||+++......
T Consensus 110 l~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~----------------------------------- 154 (299)
T d1ua2a_ 110 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN----------------------------------- 154 (299)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC-----------------------------------
T ss_pred HHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCc-----------------------------------
Confidence 999999999999999999999999999999999999987433000
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......+||++|
T Consensus 155 --------------------------------------------------------------------~~~~~~~gt~~y 166 (299)
T d1ua2a_ 155 --------------------------------------------------------------------RAYTHQVVTRWY 166 (299)
T ss_dssp --------------------------------------------------------------------CCCCCSCCCCTT
T ss_pred --------------------------------------------------------------------ccccceecChhh
Confidence 001345789999
Q ss_pred cCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc---CC----C---------------CC----
Q 002843 499 ASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD---RI----L---------------PP---- 549 (874)
Q Consensus 499 ~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~---~~----l---------------pp---- 549 (874)
+|||++.+. .|+.++|||||||++|||++|.+||... ...+..+.+ .. . +.
T Consensus 167 ~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (299)
T d1ua2a_ 167 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLH 246 (299)
T ss_dssp CCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHH
T ss_pred ccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChH
Confidence 999998765 5899999999999999999999888321 111222211 00 0 00
Q ss_pred -CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 550 -SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 550 -~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.+...++.+.+||.+||.+||++||||.|+|+||||++..
T Consensus 247 ~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p 287 (299)
T d1ua2a_ 247 HIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 287 (299)
T ss_dssp HHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred HhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCC
Confidence 0123456789999999999999999999999999998643
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-38 Score=345.78 Aligned_cols=240 Identities=17% Similarity=0.182 Sum_probs=184.9
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
++|.||++.. ... ++..+.+.++.. ..+......+..++....||+++.++.....++..
T Consensus 17 ~fg~Vy~~~~----~~~-~~~~AiK~i~~~-~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~-------------- 76 (321)
T d1tkia_ 17 EFGIVHRCVE----TSS-KKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEEL-------------- 76 (321)
T ss_dssp SSEEEEEEEE----TTT-TEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEE--------------
T ss_pred CCeEEEEEEE----CCC-CcEEEEEEEcCC-cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE--------------
Confidence 3577888751 111 122333333332 23444455667788899999999999887765554
Q ss_pred CCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecC--CcEEEeccccchhc
Q 002843 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS--NQVKYIGPIIQKET 379 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~--~~vKLiDFGlar~~ 379 (874)
+++||||+||+|.++|...+..+++.+++.|+.||+.||+|||++||+||||||+|||++.+ ..+|++|||+++..
T Consensus 77 --~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~ 154 (321)
T d1tkia_ 77 --VMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp --EEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred --EEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhcc
Confidence 45999999999999998776579999999999999999999999999999999999999854 47999999998643
Q ss_pred cccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCc
Q 002843 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (874)
Q Consensus 380 ~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~ 459 (874)
...
T Consensus 155 ~~~----------------------------------------------------------------------------- 157 (321)
T d1tkia_ 155 KPG----------------------------------------------------------------------------- 157 (321)
T ss_dssp CTT-----------------------------------------------------------------------------
T ss_pred ccC-----------------------------------------------------------------------------
Confidence 200
Q ss_pred ccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH--HHH
Q 002843 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAA 537 (874)
Q Consensus 460 ~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~--~~~ 537 (874)
.......||+.|+|||++.+..|+.++|||||||+||||++|..||.. ...
T Consensus 158 ---------------------------~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~ 210 (321)
T d1tkia_ 158 ---------------------------DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ 210 (321)
T ss_dssp ---------------------------CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ---------------------------CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHH
Confidence 001345788999999999999999999999999999999999999843 233
Q ss_pred HHHHhhcCCC--C-CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 538 AMSDLRDRIL--P-PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 538 ~~~~l~~~~l--p-p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
.+..+..... + +.+...++.+.+||.+||.+||++|||+.|+|+||||+.
T Consensus 211 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~ 263 (321)
T d1tkia_ 211 IIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263 (321)
T ss_dssp HHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred HHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence 3444443322 1 122345778999999999999999999999999999975
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=5.7e-38 Score=336.33 Aligned_cols=208 Identities=14% Similarity=0.097 Sum_probs=168.2
Q ss_pred HHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 259 KAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 259 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
...+..++... .||+++.++.....++..+ ++||||+||+|.++|+.++ .+++.+++.|+.|
T Consensus 56 ~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~----------------ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~q 118 (277)
T d1phka_ 56 TLKEVDILRKVSGHPNIIQLKDTYETNTFFF----------------LVFDLMKKGELFDYLTEKV-TLSEKETRKIMRA 118 (277)
T ss_dssp HHHHHHHHHHHTTCTTBCCEEEEEECSSEEE----------------EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeEEEEeecccCcceE----------------EEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHH
Confidence 34455556565 4999999999877555444 5999999999999998876 7999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++|||||||||+|||++.++.+||+|||+++.+...
T Consensus 119 i~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~----------------------------------- 163 (277)
T d1phka_ 119 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG----------------------------------- 163 (277)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT-----------------------------------
T ss_pred HHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccCC-----------------------------------
Confidence 999999999999999999999999999999999999998743300
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
...+..+||+.
T Consensus 164 ---------------------------------------------------------------------~~~~~~~gt~~ 174 (277)
T d1phka_ 164 ---------------------------------------------------------------------EKLREVCGTPS 174 (277)
T ss_dssp ---------------------------------------------------------------------CCBCCCCSCGG
T ss_pred ---------------------------------------------------------------------CceeeeeccCC
Confidence 00034578999
Q ss_pred ccCcccccC------CCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhcCC---CCCCCCCCCHHHHHHHHHcc
Q 002843 498 YASPEELSG------GVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRDRI---LPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 498 Y~APEvl~g------~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~~~---lpp~~~~~~p~l~dLi~~cL 566 (874)
|+|||.+.+ ..|+.++||||+||+||||++|..||.+.. ..+..+.... ..+.....++.+.+|+.+||
T Consensus 175 y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L 254 (277)
T d1phka_ 175 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFL 254 (277)
T ss_dssp GCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHC
T ss_pred CCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHc
Confidence 999999864 347899999999999999999999984322 2233333322 22334466788999999999
Q ss_pred ccCCCCCCChhHHhhhHHHHh
Q 002843 567 HPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 567 ~~dP~~RPTa~EiL~hp~~~~ 587 (874)
.+||++|||+.|||+||||++
T Consensus 255 ~~~p~~R~s~~eil~h~~~~~ 275 (277)
T d1phka_ 255 VVQPQKRYTAEEALAHPFFQQ 275 (277)
T ss_dssp CSSGGGSCCHHHHTTSGGGCT
T ss_pred cCChhHCcCHHHHHcCHHHHH
Confidence 999999999999999999975
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-38 Score=334.43 Aligned_cols=253 Identities=13% Similarity=0.066 Sum_probs=187.6
Q ss_pred cCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCc
Q 002843 197 SHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPV 275 (874)
Q Consensus 197 ~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~ 275 (874)
++..++. +.|.+|+| |.||+|...+ ....+++.++.. .........+..++....||+++
T Consensus 11 ~~~~~~~~~~iG~G~f------------g~Vy~~~~~~------~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv 71 (272)
T d1qpca_ 11 PRETLKLVERLGAGQF------------GEVWMGYYNG------HTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV 71 (272)
T ss_dssp CGGGEEEEEEEEEETT------------EEEEEEEETT------TEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBC
T ss_pred CHHHeEEeEEEecCCC------------cEEEEEEECC------CCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEe
Confidence 3444444 55666644 6677776321 111222333322 23334566777888999999999
Q ss_pred eeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002843 276 GVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLD 354 (874)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRD 354 (874)
.++.... +.. .+++||||++|+|.+++... +..+++.+++.|+.||+.||.|||++||+|||
T Consensus 72 ~~~g~~~-~~~----------------~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrD 134 (272)
T d1qpca_ 72 RLYAVVT-QEP----------------IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134 (272)
T ss_dssp CEEEEEC-SSS----------------CEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred EEEeeec-cCC----------------eEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCc
Confidence 9986432 221 25699999999999988543 22699999999999999999999999999999
Q ss_pred CCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCcc
Q 002843 355 LKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKY 434 (874)
Q Consensus 355 LKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~ 434 (874)
|||+||||+.++.+||+|||+++.+.+...
T Consensus 135 iKp~NIll~~~~~~Kl~DFGla~~~~~~~~-------------------------------------------------- 164 (272)
T d1qpca_ 135 LRAANILVSDTLSCKIADFGLARLIEDNEY-------------------------------------------------- 164 (272)
T ss_dssp CSGGGEEECTTSCEEECCCTTCEECSSSCE--------------------------------------------------
T ss_pred cchhheeeecccceeeccccceEEccCCcc--------------------------------------------------
Confidence 999999999999999999999974331000
Q ss_pred CCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccc
Q 002843 435 GNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSN 514 (874)
Q Consensus 435 g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSD 514 (874)
...+...||+.|||||++.++.|+.++|
T Consensus 165 ----------------------------------------------------~~~~~~~gt~~y~APE~~~~~~~~~~sD 192 (272)
T d1qpca_ 165 ----------------------------------------------------TAREGAKFPIKWTAPEAINYGTFTIKSD 192 (272)
T ss_dssp ----------------------------------------------------ECCTTCCCCTTTSCHHHHHHCEECHHHH
T ss_pred ----------------------------------------------------ccccccCCcccccChHHHhCCCCCchhh
Confidence 0002456889999999999889999999
Q ss_pred hhHHHHHHHHhcCC-CCchH--HHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh--hHHHHh
Q 002843 515 IYSLGVLFFELFGR-FDSER--ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ--SEVTNE 587 (874)
Q Consensus 515 IwSLGVIL~ELltG-~~p~~--~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~--hp~~~~ 587 (874)
||||||+||||+|| .+|+. .....+..+.....++......+.+.+||.+||+.||++|||+.||++ ++||..
T Consensus 193 vwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts 270 (272)
T d1qpca_ 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (272)
T ss_dssp HHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence 99999999999996 44442 233345556655555444556678999999999999999999999998 788864
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-37 Score=333.53 Aligned_cols=209 Identities=12% Similarity=0.111 Sum_probs=164.8
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..++....||+++.++......... +++||||.+++|.+++......+++.+++.|+.
T Consensus 54 ~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~----------------~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~ 117 (283)
T d1mqba_ 54 VDFLGEAGIMGQFSHHNIIRLEGVISKYKPM----------------MIITEYMENGALDKFLREKDGEFSVLQLVGMLR 117 (283)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEECSSSSE----------------EEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEeeeeEEEecCCce----------------EEEEEecccCcchhhhhcccccccHHHHHHHHH
Confidence 3456777889999999999998875533322 469999999999999987766899999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||+++||||||||+||||+.++.+||+|||+++.+.....
T Consensus 118 ~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~-------------------------------- 165 (283)
T d1mqba_ 118 GIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE-------------------------------- 165 (283)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------------------------------
T ss_pred HHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCc--------------------------------
Confidence 999999999999999999999999999999999999999985431000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.........||+
T Consensus 166 --------------------------------------------------------------------~~~~~~~~~gt~ 177 (283)
T d1mqba_ 166 --------------------------------------------------------------------ATYTTSGGKIPI 177 (283)
T ss_dssp ----------------------------------------------------------------------------CCCG
T ss_pred --------------------------------------------------------------------cceEeccCCCCc
Confidence 000012446889
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcCCC-CchH--HHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRF-DSER--ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~-~p~~--~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|||||++.++.|+.++|||||||+||||+++. +|+. .....+..+..+..++......+.+.+||.+||+.||++|
T Consensus 178 ~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 257 (283)
T d1mqba_ 178 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARR 257 (283)
T ss_dssp GGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTS
T ss_pred cccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHC
Confidence 999999999999999999999999999999964 4432 2334455666666555555566789999999999999999
Q ss_pred CChhHHhh
Q 002843 574 PTTREILQ 581 (874)
Q Consensus 574 PTa~EiL~ 581 (874)
||+.||++
T Consensus 258 Pt~~eil~ 265 (283)
T d1mqba_ 258 PKFADIVS 265 (283)
T ss_dssp CCHHHHHH
T ss_pred cCHHHHHH
Confidence 99999986
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.6e-37 Score=334.29 Aligned_cols=213 Identities=16% Similarity=0.092 Sum_probs=169.7
Q ss_pred hHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHH
Q 002843 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLY 333 (874)
Q Consensus 255 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~ 333 (874)
+......+..++....||+++.++.....+... +++||||++|+|.++|... ...+++..++.
T Consensus 56 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~----------------~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~ 119 (287)
T d1opja_ 56 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF----------------YIITEFMTYGNLLDYLRECNRQEVSAVVLLY 119 (287)
T ss_dssp CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC----------------EEEEECCTTCBHHHHHHHSCTTTSCHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCEecCCccEeeCCee----------------EEEeecccCcchHHHhhhccccchHHHHHHH
Confidence 344566777889999999999998876533332 4699999999999999764 34799999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
|+.||+.||+|||++|||||||||+||||+.++.+||+|||+++....+..
T Consensus 120 i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~----------------------------- 170 (287)
T d1opja_ 120 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----------------------------- 170 (287)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSS-----------------------------
T ss_pred HHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCc-----------------------------
Confidence 999999999999999999999999999999999999999999874331000
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
...+...
T Consensus 171 -------------------------------------------------------------------------~~~~~~~ 177 (287)
T d1opja_ 171 -------------------------------------------------------------------------TAHAGAK 177 (287)
T ss_dssp -------------------------------------------------------------------------EEETTEE
T ss_pred -------------------------------------------------------------------------eeecccc
Confidence 0012346
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCc-hH--HHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCC
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS-ER--ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p-~~--~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP 570 (874)
||+.|+|||++.+..|+.++|||||||+||||++|..| +. ........+.....++.....++.+.+||.+||+.||
T Consensus 178 g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP 257 (287)
T d1opja_ 178 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 257 (287)
T ss_dssp ECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred ccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCH
Confidence 78899999999999999999999999999999996544 32 2333344555555555545567889999999999999
Q ss_pred CCCCChhHHhhhHHHHh
Q 002843 571 LSRPTTREILQSEVTNE 587 (874)
Q Consensus 571 ~~RPTa~EiL~hp~~~~ 587 (874)
++|||+.||++ +|+.
T Consensus 258 ~~Rps~~ei~~--~L~~ 272 (287)
T d1opja_ 258 SDRPSFAEIHQ--AFET 272 (287)
T ss_dssp GGSCCHHHHHH--HHHH
T ss_pred hHCcCHHHHHH--HHHH
Confidence 99999999964 4543
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-37 Score=334.97 Aligned_cols=217 Identities=15% Similarity=0.103 Sum_probs=164.2
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
+.+..-..+....||+++.+++......... ...-+++||||+|+++..+.......+++..++.|++|
T Consensus 56 ~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~-----------~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~q 124 (305)
T d1blxa_ 56 REVAVLRHLETFEHPNVVRLFDVCTVSRTDR-----------ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124 (305)
T ss_dssp HHHHHHHHHHHTCCTTBCCEEEEEEEEECSS-----------EEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCcceeeeeeccccccc-----------CceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHH
Confidence 3444444556668999999887643211100 00025799999998887666666558999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||+|||++|||||||||+|||++..+.+||+|||+++.....
T Consensus 125 i~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~----------------------------------- 169 (305)
T d1blxa_ 125 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ----------------------------------- 169 (305)
T ss_dssp HHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGG-----------------------------------
T ss_pred HHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhccc-----------------------------------
Confidence 999999999999999999999999999999999999987632200
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.......||+.
T Consensus 170 ---------------------------------------------------------------------~~~~~~~gT~~ 180 (305)
T d1blxa_ 170 ---------------------------------------------------------------------MALTSVVVTLW 180 (305)
T ss_dssp ---------------------------------------------------------------------GGGCCCCCCCT
T ss_pred ---------------------------------------------------------------------ccCCCcccChh
Confidence 00135679999
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc---CC-----------------------CCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD---RI-----------------------LPP 549 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~---~~-----------------------lpp 549 (874)
|+|||++.+.+|+.++|||||||++|||++|.+||.... ..+..+.. .. .+.
T Consensus 181 Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (305)
T d1blxa_ 181 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEK 260 (305)
T ss_dssp TCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGG
T ss_pred hcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhh
Confidence 999999999999999999999999999999999984221 11221111 00 001
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 550 ~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
.....++.+.+||.+||++||++|||+.|+|+||||+++.
T Consensus 261 ~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~ 300 (305)
T d1blxa_ 261 FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 300 (305)
T ss_dssp TCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred ccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCch
Confidence 1123456788999999999999999999999999998764
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-37 Score=329.73 Aligned_cols=207 Identities=13% Similarity=0.076 Sum_probs=161.9
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..+++...||+++.++.... ++. .+++||||+||+|.+++......+++.+++.++.
T Consensus 53 ~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~----------------~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~ 115 (273)
T d1mp8a_ 53 EKFLQEALTMRQFDHPHIVKLIGVIT-ENP----------------VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 115 (273)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEEC-SSS----------------CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEe-cCe----------------EEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHH
Confidence 34566778888999999999987643 221 2579999999999999887666899999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||.|||++|||||||||+|||++.++.+||+|||+++.+.....
T Consensus 116 qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~-------------------------------- 163 (273)
T d1mp8a_ 116 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY-------------------------------- 163 (273)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------------------------------------------
T ss_pred HHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCcc--------------------------------
Confidence 999999999999999999999999999999999999999874330000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
...+...||+
T Consensus 164 ----------------------------------------------------------------------~~~~~~~gt~ 173 (273)
T d1mp8a_ 164 ----------------------------------------------------------------------YKASKGKLPI 173 (273)
T ss_dssp -----------------------------------------------------------------------------CCG
T ss_pred ----------------------------------------------------------------------eeccceecCc
Confidence 0013456889
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
.|+|||++.+..|+.++|||||||+||||++ |.+|+.. ....+..+.....++.....++.+.+||.+||..||++|
T Consensus 174 ~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R 253 (273)
T d1mp8a_ 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 253 (273)
T ss_dssp GGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred ccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHC
Confidence 9999999999999999999999999999998 7888743 222344555555555555667889999999999999999
Q ss_pred CChhHHhhh
Q 002843 574 PTTREILQS 582 (874)
Q Consensus 574 PTa~EiL~h 582 (874)
||+.||+++
T Consensus 254 ps~~ei~~~ 262 (273)
T d1mp8a_ 254 PRFTELKAQ 262 (273)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 999999876
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=5.7e-37 Score=327.42 Aligned_cols=247 Identities=18% Similarity=0.219 Sum_probs=179.2
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChh---HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCcc
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD---AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (874)
|.|.||++.. .. .++..+.+.++.....+ ..+...+..++....||+++.++.....+.....
T Consensus 19 ~fg~Vy~a~~----~~-~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~--------- 84 (277)
T d1o6ya_ 19 GMSEVHLARD----LR-LHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP--------- 84 (277)
T ss_dssp SSEEEEEEEE----TT-TTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSE---------
T ss_pred CCeEEEEEEE----CC-CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCc---------
Confidence 3467888851 11 12233444444433222 2335567788899999999999887664433110
Q ss_pred ccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchh
Q 002843 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (874)
Q Consensus 299 ~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~ 378 (874)
..+++||||+|++|.+++...+ .+++.+++.|++||+.||+|||++|||||||||+|||++.++.++++|||+++.
T Consensus 85 ---~~~lvmE~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~ 160 (277)
T d1o6ya_ 85 ---LPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA 160 (277)
T ss_dssp ---EEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEE
T ss_pred ---eEEEEEECCCCCEehhhhcccC-CCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhh
Confidence 0257999999999999998876 799999999999999999999999999999999999999999999999998763
Q ss_pred ccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCC
Q 002843 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (874)
Q Consensus 379 ~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~ 458 (874)
......
T Consensus 161 ~~~~~~-------------------------------------------------------------------------- 166 (277)
T d1o6ya_ 161 IADSGN-------------------------------------------------------------------------- 166 (277)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hccccc--------------------------------------------------------------------------
Confidence 320000
Q ss_pred cccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH---H
Q 002843 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA---L 535 (874)
Q Consensus 459 ~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~---~ 535 (874)
........+||+.|+|||++.+..|+.++|||||||+||||+||.+||.. .
T Consensus 167 --------------------------~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~ 220 (277)
T d1o6ya_ 167 --------------------------SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 220 (277)
T ss_dssp --------------------------------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred --------------------------cccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHH
Confidence 00011456899999999999999999999999999999999999999843 2
Q ss_pred HHHHHHhhcCCCCCC--CCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHH
Q 002843 536 AAAMSDLRDRILPPS--FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (874)
Q Consensus 536 ~~~~~~l~~~~lpp~--~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~ 586 (874)
......+.....++. ....++.+.+||.+||++||.+||+..+.|.|+|++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r 273 (277)
T d1o6ya_ 221 SVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 273 (277)
T ss_dssp HHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence 333445555555443 234567899999999999999999666666788875
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-38 Score=334.53 Aligned_cols=192 Identities=17% Similarity=0.161 Sum_probs=157.0
Q ss_pred CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002843 270 ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHG-VNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ 348 (874)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~G-gsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~ 348 (874)
.||+++.+++....+... +++||||.| ++|.+++.+.+ .+++.+++.|++||+.||+|||++
T Consensus 67 ~h~nIv~~~~~~~~~~~~----------------~lv~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~al~~lH~~ 129 (273)
T d1xwsa_ 67 GFSGVIRLLDWFERPDSF----------------VLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNC 129 (273)
T ss_dssp SSCSBCCEEEEEECSSEE----------------EEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCccEEEEEEeeCCeE----------------EEEEEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 489999999876654443 459999986 68999998766 799999999999999999999999
Q ss_pred CCcccCCCCCceEEecC-CcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhccccccccccc
Q 002843 349 GVTFLDLKPSSFKLLQS-NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427 (874)
Q Consensus 349 gIIHRDLKPsNILL~~~-~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~ 427 (874)
|||||||||+|||++.+ +.+||+|||+++....
T Consensus 130 ~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~---------------------------------------------- 163 (273)
T d1xwsa_ 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---------------------------------------------- 163 (273)
T ss_dssp TEECSCCSGGGEEEETTTTEEEECCCTTCEECCS----------------------------------------------
T ss_pred CCccccCcccceEEecCCCeEEECccccceeccc----------------------------------------------
Confidence 99999999999999855 7899999999863220
Q ss_pred ccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC
Q 002843 428 SLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG 507 (874)
Q Consensus 428 ~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~ 507 (874)
...+...||+.|+|||++.+.
T Consensus 164 -----------------------------------------------------------~~~~~~~GT~~y~aPE~~~~~ 184 (273)
T d1xwsa_ 164 -----------------------------------------------------------TVYTDFDGTRVYSPPEWIRYH 184 (273)
T ss_dssp -----------------------------------------------------------SCBCCCCSCGGGSCHHHHHHS
T ss_pred -----------------------------------------------------------ccccccccCCCcCCHHHHcCC
Confidence 001345799999999999877
Q ss_pred CC-CCccchhHHHHHHHHhcCCCCchHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHH
Q 002843 508 VC-TTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (874)
Q Consensus 508 ~y-s~kSDIwSLGVIL~ELltG~~p~~~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~ 586 (874)
.+ +.++|||||||+||||++|..||....... +.....+ ...++.+.+||.+||.+||++|||+.|+|+||||+
T Consensus 185 ~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~---~~~~~~~--~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~ 259 (273)
T d1xwsa_ 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII---RGQVFFR--QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259 (273)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH---HCCCCCS--SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred CCCCcccccccceeeehhHhhCCCCCCCchHHh---hcccCCC--CCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhC
Confidence 65 678999999999999999999997654322 2222111 23457899999999999999999999999999998
Q ss_pred hh
Q 002843 587 EF 588 (874)
Q Consensus 587 ~~ 588 (874)
.+
T Consensus 260 ~~ 261 (273)
T d1xwsa_ 260 DV 261 (273)
T ss_dssp SC
T ss_pred CC
Confidence 64
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-36 Score=332.24 Aligned_cols=209 Identities=14% Similarity=0.032 Sum_probs=168.3
Q ss_pred HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHH
Q 002843 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIF 335 (874)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~ 335 (874)
......+..++....||+++.++.....+ . .+++||||.+++|.+++......+++.+++.|+
T Consensus 55 ~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~----------------~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~ 117 (317)
T d1xkka_ 55 NKEILDEAYVMASVDNPHVCRLLGICLTS-T----------------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 117 (317)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEEESS-S----------------EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCEeeEEEEEecC-C----------------eeEEEEeccCCcccccccccccCCCHHHHHHHH
Confidence 34456677888888999999998875522 2 245899999999999998877689999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
.||+.||+|||++|||||||||+|||++.++.+||+|||+++.......
T Consensus 118 ~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~------------------------------- 166 (317)
T d1xkka_ 118 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK------------------------------- 166 (317)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC-------------------------------
T ss_pred HHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecccccc-------------------------------
Confidence 9999999999999999999999999999999999999999985431000
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
........||
T Consensus 167 ----------------------------------------------------------------------~~~~~~~~gt 176 (317)
T d1xkka_ 167 ----------------------------------------------------------------------EYHAEGGKVP 176 (317)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ----------------------------------------------------------------------cccccccccC
Confidence 0000244689
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHHH--HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~~--~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
+.|+|||++.++.|+.++|||||||+||||+| |.+||... ......+..+..++......+.+.+|+.+||+.||.+
T Consensus 177 ~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~ 256 (317)
T d1xkka_ 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADS 256 (317)
T ss_dssp TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGG
T ss_pred ccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHhCCCChhh
Confidence 99999999999999999999999999999998 78887532 2234455555545544556688999999999999999
Q ss_pred CCChhHHhhh
Q 002843 573 RPTTREILQS 582 (874)
Q Consensus 573 RPTa~EiL~h 582 (874)
|||+.||++|
T Consensus 257 RPs~~eil~~ 266 (317)
T d1xkka_ 257 RPKFRELIIE 266 (317)
T ss_dssp SCCHHHHHHH
T ss_pred CcCHHHHHHH
Confidence 9999999988
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-36 Score=321.34 Aligned_cols=236 Identities=14% Similarity=0.092 Sum_probs=183.5
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
+.|.||+|...+. ...+.+.++. ...+......+..++....||+++.++.....++..
T Consensus 16 ~fg~Vy~~~~~~~------~~vAvK~l~~-~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~-------------- 74 (258)
T d1k2pa_ 16 QFGVVKYGKWRGQ------YDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPI-------------- 74 (258)
T ss_dssp TTEEEEEEEETTT------EEEEEEEEES-SSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSE--------------
T ss_pred CCeEEEEEEECCC------CEEEEEEECc-CcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCce--------------
Confidence 5578899874221 1122222222 233445566778888899999999998876533332
Q ss_pred CCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
+++||||++|+|.+++......+++..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.+
T Consensus 75 --~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 152 (258)
T d1k2pa_ 75 --FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 152 (258)
T ss_dssp --EEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSS
T ss_pred --EEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccC
Confidence 469999999999999877655899999999999999999999999999999999999999999999999999874331
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
...
T Consensus 153 ~~~----------------------------------------------------------------------------- 155 (258)
T d1k2pa_ 153 DEY----------------------------------------------------------------------------- 155 (258)
T ss_dssp SSC-----------------------------------------------------------------------------
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 000
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHH
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAA 538 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~ 538 (874)
.......||+.|+|||++.+..|+.++|||||||++|||+| |..||.. ....
T Consensus 156 -------------------------~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~ 210 (258)
T d1k2pa_ 156 -------------------------TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 210 (258)
T ss_dssp -------------------------CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH
T ss_pred -------------------------eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHH
Confidence 00124578899999999999999999999999999999998 7888743 3334
Q ss_pred HHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 539 MSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 539 ~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
...+.....++......+.+.+||.+||..||++|||+.|||+|
T Consensus 211 ~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 211 AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhCCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 45555554444444556789999999999999999999999998
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-36 Score=325.76 Aligned_cols=215 Identities=15% Similarity=0.148 Sum_probs=165.0
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.+...+..++....||+++.++.....++.. +++||||.|+.+..........+++.+++.|+.
T Consensus 46 ~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~----------------~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~ 109 (298)
T d1gz8a_ 46 STAIREISLLKELNHPNIVKLLDVIHTENKL----------------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 109 (298)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEEEEEETTEE----------------EEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcEEEeccccccccce----------------eEEEeecCCchhhhhhhhcccCCCHHHHHHHHH
Confidence 3455677788899999999999988765543 469999986544444344455799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++|||||||||+|||++.++.+|++|||+++....+.
T Consensus 110 qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~--------------------------------- 156 (298)
T d1gz8a_ 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--------------------------------- 156 (298)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS---------------------------------
T ss_pred HHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCc---------------------------------
Confidence 99999999999999999999999999999999999999987433100
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......||+
T Consensus 157 ----------------------------------------------------------------------~~~~~~~gt~ 166 (298)
T d1gz8a_ 157 ----------------------------------------------------------------------RTYTHEVVTL 166 (298)
T ss_dssp ----------------------------------------------------------------------BCTTCCBCCC
T ss_pred ----------------------------------------------------------------------ccceeecccc
Confidence 0013457899
Q ss_pred cccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHh-hc--C----C-------------CCC----
Q 002843 497 WYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDL-RD--R----I-------------LPP---- 549 (874)
Q Consensus 497 ~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l-~~--~----~-------------lpp---- 549 (874)
.|+|||++.... ++.++|||||||++|+|++|..||.... ..+..+ .. . . .+.
T Consensus 167 ~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (298)
T d1gz8a_ 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 246 (298)
T ss_dssp TTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCC
T ss_pred eeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccccccccccccc
Confidence 999999988766 5899999999999999999999984211 111111 10 0 0 000
Q ss_pred ----CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHh
Q 002843 550 ----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (874)
Q Consensus 550 ----~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~ 590 (874)
.....++.+.+|+.+||.+||++|||+.|+|+||||+++..
T Consensus 247 ~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~ 291 (298)
T d1gz8a_ 247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291 (298)
T ss_dssp CHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred chhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence 01233467889999999999999999999999999987643
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-36 Score=331.21 Aligned_cols=251 Identities=16% Similarity=0.174 Sum_probs=178.8
Q ss_pred ceEEEecCCCCcccccccccccccccccCC-ChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 223 kGvv~kg~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
.|.||++.. .. ..+..+.+.++... .....+...+..++....||+++.+......+.... .
T Consensus 21 fg~Vy~~~~----~~-~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~------------~ 83 (345)
T d1pmea_ 21 YGMVCSAYD----NV-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ------------M 83 (345)
T ss_dssp CCCEEEEEE----TT-TCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTT------------C
T ss_pred CeEEEEEEE----CC-CCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccc------------c
Confidence 377888851 11 12223333343322 222334566778889999999998887755433211 1
Q ss_pred CCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccc
Q 002843 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~ 381 (874)
..+.+|||+.||+|.+++..+ .+++.+++.|++||+.||+|||++|||||||||+||||+.++.+||+|||+++....
T Consensus 84 ~~~~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~ 161 (345)
T d1pmea_ 84 KDVYLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 161 (345)
T ss_dssp CCEEEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred ceEEEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence 123466777899999999876 599999999999999999999999999999999999999999999999999874330
Q ss_pred cccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCccc
Q 002843 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (874)
Q Consensus 382 ~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~ 461 (874)
...
T Consensus 162 ~~~----------------------------------------------------------------------------- 164 (345)
T d1pmea_ 162 DHD----------------------------------------------------------------------------- 164 (345)
T ss_dssp GGC-----------------------------------------------------------------------------
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 000
Q ss_pred ccccCcCCCCCCCCCcccccccccccccccccccccccCcccccC-CCCCCccchhHHHHHHHHhcCCCCchHHHH---H
Q 002843 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALA---A 537 (874)
Q Consensus 462 ~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g-~~ys~kSDIwSLGVIL~ELltG~~p~~~~~---~ 537 (874)
........+||+.|+|||++.. ..|+.++||||+||++|||++|..||.... .
T Consensus 165 -----------------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~ 221 (345)
T d1pmea_ 165 -----------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 221 (345)
T ss_dssp -----------------------BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred -----------------------cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHH
Confidence 0000135689999999999855 457899999999999999999998873211 1
Q ss_pred HHHH--hhc-------------------CCCCC--------CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 538 AMSD--LRD-------------------RILPP--------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 538 ~~~~--l~~-------------------~~lpp--------~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
.... +.. ...+. .+...++.+.+|+.+||.+||.+|||+.|+|+||||+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~ 301 (345)
T d1pmea_ 222 LNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 301 (345)
T ss_dssp HHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred HHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence 1000 000 00111 123445778999999999999999999999999999966
Q ss_pred Hhhh
Q 002843 589 QEVC 592 (874)
Q Consensus 589 ~~~~ 592 (874)
....
T Consensus 302 ~~~~ 305 (345)
T d1pmea_ 302 YDPS 305 (345)
T ss_dssp CCGG
T ss_pred CCCc
Confidence 5543
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.1e-36 Score=323.52 Aligned_cols=247 Identities=15% Similarity=0.083 Sum_probs=183.1
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChh-HHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCcccc
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (874)
|.|.||+|..............+++.+..+...+ ......+...+....||+++.+.......+..
T Consensus 25 ~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~------------- 91 (301)
T d1lufa_ 25 AFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM------------- 91 (301)
T ss_dssp SSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC-------------
T ss_pred CCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCce-------------
Confidence 3477888863111111111122333333332222 23456777888999999999998876543332
Q ss_pred CCCceEeeccCCCCHHHHHHhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCC
Q 002843 301 IGGLRQGSSDHGVNLREWLNARG-----------------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKP 357 (874)
Q Consensus 301 ~~~~lvMEy~~GgsL~~~L~~~~-----------------------~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKP 357 (874)
+++||||++|+|.++|.... ..+++.+++.|++||+.||+|||++|||||||||
T Consensus 92 ---~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp 168 (301)
T d1lufa_ 92 ---CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT 168 (301)
T ss_dssp ---EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred ---EEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcc
Confidence 46999999999999997532 1489999999999999999999999999999999
Q ss_pred CceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCc
Q 002843 358 SSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNK 437 (874)
Q Consensus 358 sNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~ 437 (874)
+||||+.++.+||+|||+++.+.....
T Consensus 169 ~NILld~~~~~Kl~DFGls~~~~~~~~----------------------------------------------------- 195 (301)
T d1lufa_ 169 RNCLVGENMVVKIADFGLSRNIYSADY----------------------------------------------------- 195 (301)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGC-----------------------------------------------------
T ss_pred cceEECCCCcEEEccchhheeccCCcc-----------------------------------------------------
Confidence 999999999999999999975431100
Q ss_pred cccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhH
Q 002843 438 IETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYS 517 (874)
Q Consensus 438 ~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwS 517 (874)
....+...||+.|+|||.+.+..|+.++||||
T Consensus 196 ------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS 227 (301)
T d1lufa_ 196 ------------------------------------------------YKADGNDAIPIRWMPPESIFYNRYTTESDVWA 227 (301)
T ss_dssp ------------------------------------------------BC----CCBCGGGCCHHHHHHCCCCHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCcCcCcCCHHHHccCCCChhhhhcc
Confidence 00013457889999999999999999999999
Q ss_pred HHHHHHHhcCCC-CchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 518 LGVLFFELFGRF-DSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 518 LGVIL~ELltG~-~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
|||+||||++|. +||.. ....+..+..+..++......+.+.+||.+||+.||++||||.||++ .++.
T Consensus 228 ~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~--~L~~ 298 (301)
T d1lufa_ 228 YGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR--ILQR 298 (301)
T ss_dssp HHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH--HHHH
T ss_pred chhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH--HHHH
Confidence 999999999984 56632 33445667777666666667788999999999999999999999954 4444
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-36 Score=331.53 Aligned_cols=217 Identities=14% Similarity=0.195 Sum_probs=166.6
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.....+..+++...||+++.++......+.... ...-+++|||| |.+|..+++.. .+++..++.|++
T Consensus 62 ~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~----------~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~~~~ 128 (346)
T d1cm8a_ 62 KRAYRELRLLKHMRHENVIGLLDVFTPDETLDD----------FTDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVY 128 (346)
T ss_dssp HHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT----------CCCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCeeEEEEEeccCccccc----------cceEEEEEecc-cccHHHHHHhc--cccHHHHHHHHH
Confidence 345567778888999999998887654332211 01136899999 67899888765 599999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++|||||||||+|||++.++.+|++|||+++....
T Consensus 129 qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~----------------------------------- 173 (346)
T d1cm8a_ 129 QMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS----------------------------------- 173 (346)
T ss_dssp HHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS-----------------------------------
T ss_pred HHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCC-----------------------------------
Confidence 999999999999999999999999999999999999999863220
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
..+..+||+
T Consensus 174 -----------------------------------------------------------------------~~~~~~~t~ 182 (346)
T d1cm8a_ 174 -----------------------------------------------------------------------EMTGYVVTR 182 (346)
T ss_dssp -----------------------------------------------------------------------SCCSSCSCG
T ss_pred -----------------------------------------------------------------------ccccccccc
Confidence 013457899
Q ss_pred cccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHHH--HHHHh---hc--------------------------
Q 002843 497 WYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALAA--AMSDL---RD-------------------------- 544 (874)
Q Consensus 497 ~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~~--~~~~l---~~-------------------------- 544 (874)
+|+|||++.+. .++.++|||||||+||||++|.+||..... .+..+ ..
T Consensus 183 ~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (346)
T d1cm8a_ 183 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELE 262 (346)
T ss_dssp GGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCC
T ss_pred cccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCccc
Confidence 99999999874 478999999999999999999988732111 01000 00
Q ss_pred -CCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 545 -RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 545 -~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
..+...+...++.+.+||.+||.+||.+|||+.|||+||||+.+.+..
T Consensus 263 ~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~~ 311 (346)
T d1cm8a_ 263 KKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTE 311 (346)
T ss_dssp CCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC---
T ss_pred ccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCcc
Confidence 011112334567889999999999999999999999999999876443
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=4.8e-36 Score=321.25 Aligned_cols=211 Identities=14% Similarity=0.155 Sum_probs=162.0
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.+...+..++....||+++.++.....++.. +++|||+.|+.|..+....+ .+++.+++.|+.
T Consensus 45 ~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~----------------~i~~e~~~~~~~~~~~~~~~-~l~~~~~~~i~~ 107 (286)
T d1ob3a_ 45 STTIREISILKELKHSNIVKLYDVIHTKKRL----------------VLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLL 107 (286)
T ss_dssp HHHHHHHHGGGGCCCTTBCCEEEEEECSSCE----------------EEEEECCSEEHHHHHHTSTT-CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcEEeeeeecccCCce----------------eEEEEeehhhhHHHHHhhcC-CcchhhhHHHHH
Confidence 3455677788899999999998887755543 45999999877766665554 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++|||||||||+|||++.++.+|++|||++.....+.
T Consensus 108 qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~--------------------------------- 154 (286)
T d1ob3a_ 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--------------------------------- 154 (286)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----------------------------------
T ss_pred HHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCc---------------------------------
Confidence 99999999999999999999999999999999999999987433100
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......|++
T Consensus 155 ----------------------------------------------------------------------~~~~~~~~~~ 164 (286)
T d1ob3a_ 155 ----------------------------------------------------------------------RKYTHEIVTL 164 (286)
T ss_dssp -----------------------------------------------------------------------------CCC
T ss_pred ----------------------------------------------------------------------cccceecccc
Confidence 0002446789
Q ss_pred cccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHH--HHHHHHhhc---CC-----------------C------
Q 002843 497 WYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRD---RI-----------------L------ 547 (874)
Q Consensus 497 ~Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~~~~~l~~---~~-----------------l------ 547 (874)
.|+|||++.+. .++.++|||||||++|||++|..||... ...+..+.. .. .
T Consensus 165 ~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (286)
T d1ob3a_ 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPL 244 (286)
T ss_dssp TTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCC
T ss_pred hhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCc
Confidence 99999999864 4799999999999999999999998421 111111110 00 0
Q ss_pred --CCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 548 --PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 548 --pp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
+..+...++.+.+||.+||++||++|||+.|+|+||||++
T Consensus 245 ~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 245 PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (286)
T ss_dssp CGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred chhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence 0012234567899999999999999999999999999974
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-36 Score=320.86 Aligned_cols=235 Identities=15% Similarity=0.087 Sum_probs=175.9
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
++|.||||... +...+.+.++.+ ........+..++....||+++.++.....+...
T Consensus 19 ~fg~Vy~~~~~-------~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~-------------- 75 (262)
T d1byga_ 19 EFGDVMLGDYR-------GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG-------------- 75 (262)
T ss_dssp SSCEEEEEEET-------TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--C--------------
T ss_pred CCeEEEEEEEC-------CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCc--------------
Confidence 44778888631 222333444333 2334456677888889999999998875432211
Q ss_pred CCceEeeccCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhcc
Q 002843 302 GGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~-~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~ 380 (874)
-+++||||+||+|.++|...+ ..+++..++.|+.||+.||.|||+.+||||||||+|||++.++.+|++|||+++...
T Consensus 76 -~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~ 154 (262)
T d1byga_ 76 -LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 154 (262)
T ss_dssp -CEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred -EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecC
Confidence 257999999999999996542 259999999999999999999999999999999999999999999999999987432
Q ss_pred ccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcc
Q 002843 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (874)
Q Consensus 381 ~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~ 460 (874)
..
T Consensus 155 ~~------------------------------------------------------------------------------ 156 (262)
T d1byga_ 155 ST------------------------------------------------------------------------------ 156 (262)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 00
Q ss_pred cccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHH
Q 002843 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAA 537 (874)
Q Consensus 461 ~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~ 537 (874)
.....+|+.|+|||++.++.|+.++|||||||++|||+| |.+|+.. ...
T Consensus 157 ----------------------------~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~ 208 (262)
T d1byga_ 157 ----------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 208 (262)
T ss_dssp ---------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG
T ss_pred ----------------------------CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH
Confidence 013356789999999999999999999999999999998 6777643 223
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 538 AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 538 ~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
....+.....++.....++.+.+||.+||+.||.+|||+.+++++ ++.+
T Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~--L~~i 257 (262)
T d1byga_ 209 VVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ--LEHI 257 (262)
T ss_dssp HHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH--HHHH
T ss_pred HHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH--HHHH
Confidence 355566666666555667889999999999999999999999774 4443
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-36 Score=321.81 Aligned_cols=255 Identities=15% Similarity=0.075 Sum_probs=186.7
Q ss_pred ccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCC
Q 002843 196 LSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKP 274 (874)
Q Consensus 196 ~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~ 274 (874)
++++.++. +.|.+|+| |.||+|...+. + . .+.+.+..+ ..+......+..++....||++
T Consensus 14 i~~~~~~i~~~iG~G~f------------g~Vy~~~~~~~----~-~-vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nI 74 (285)
T d1fmka3 14 IPRESLRLEVKLGQGCF------------GEVWMGTWNGT----T-R-VAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKL 74 (285)
T ss_dssp CCGGGEEEEEEEEECSS------------CEEEEEEETTT----E-E-EEEEECCTT-SSCHHHHHHHHHHHHHCCCTTB
T ss_pred cCHHHEEEeeEEeeCCC------------eEEEEEEECCC----C-E-EEEEEECcc-cCCHHHHHHHHHHHHhcccCCE
Confidence 34556665 66777655 56788763211 1 1 222333322 2344556778888999999999
Q ss_pred ceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002843 275 VGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFL 353 (874)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~-~~~lse~e~~~I~~QIl~aL~yLHs~gIIHR 353 (874)
+.+++... +... +++||||++|+|..++... ...+++.+++.|+.||+.||+|||++||+||
T Consensus 75 v~~~g~~~-~~~~----------------~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~ 137 (285)
T d1fmka3 75 VQLYAVVS-EEPI----------------YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 137 (285)
T ss_dssp CCEEEEEC-SSSC----------------EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred eEEEEEEe-cCCe----------------EEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecc
Confidence 99987643 2222 4699999999999998542 2369999999999999999999999999999
Q ss_pred CCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCc
Q 002843 354 DLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSK 433 (874)
Q Consensus 354 DLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~ 433 (874)
||||+||||+.++.+||+|||+++...++..
T Consensus 138 DlKp~NIll~~~~~~kl~DfGla~~~~~~~~------------------------------------------------- 168 (285)
T d1fmka3 138 DLRAANILVGENLVCKVADFGLARLIEDNEY------------------------------------------------- 168 (285)
T ss_dssp CCSGGGEEECGGGCEEECCCCTTC--------------------------------------------------------
T ss_pred cccceEEEECCCCcEEEcccchhhhccCCCc-------------------------------------------------
Confidence 9999999999999999999999874331000
Q ss_pred cCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCcc
Q 002843 434 YGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSS 513 (874)
Q Consensus 434 ~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kS 513 (874)
...+...||+.|+|||++.++.++.++
T Consensus 169 -----------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ks 195 (285)
T d1fmka3 169 -----------------------------------------------------TARQGAKFPIKWTAPEAALYGRFTIKS 195 (285)
T ss_dssp ------------------------------------------------------------CCGGGSCHHHHHHCCCCHHH
T ss_pred -----------------------------------------------------eeeccccccccccChHHHhCCCCCcHH
Confidence 001345789999999999999999999
Q ss_pred chhHHHHHHHHhcCCCCc-hH--HHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh--hHHHHhh
Q 002843 514 NIYSLGVLFFELFGRFDS-ER--ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ--SEVTNEF 588 (874)
Q Consensus 514 DIwSLGVIL~ELltG~~p-~~--~~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~--hp~~~~~ 588 (874)
|||||||+||||++|..| +. .....+..+.....++.....++.+.+||.+||+.||++||++.+|++ ++||...
T Consensus 196 DI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~ 275 (285)
T d1fmka3 196 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 275 (285)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred hhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence 999999999999996444 32 223345555555555555556688999999999999999999999987 6777543
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-35 Score=319.51 Aligned_cols=257 Identities=16% Similarity=0.154 Sum_probs=182.3
Q ss_pred ccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCccc--ccccccccccccccCCChhH-HHHHHHHhHHhh-cC
Q 002843 196 LSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFK--ERRGMIDTKAFVTTTMPSDA-ALKAAGAMMVAS-NA 270 (874)
Q Consensus 196 ~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~--~~~~~~~~~~~~~~~~~~d~-~~~~~~~~l~~~-~~ 270 (874)
++++.... |.|.+|+| |.||++.....-. ..+....+++.++.+..... .....+...+.. ..
T Consensus 10 i~~~~~~l~~~iG~G~f------------g~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~ 77 (299)
T d1fgka_ 10 LPRDRLVLGKPLGEGAF------------GQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77 (299)
T ss_dssp CCGGGEEEEEECC-----------------CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred ccHHHeEEeeEEeecCC------------cEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcC
Confidence 45555554 66666655 5577764211100 11112223333333332222 334444444444 48
Q ss_pred CCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------------CCCCHHHHHHHH
Q 002843 271 SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIF 335 (874)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---------------~~lse~e~~~I~ 335 (874)
||+++.+......++.. +++||||+||+|.++|.... ..+++.+++.|+
T Consensus 78 HpnIv~~~~~~~~~~~~----------------~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 141 (299)
T d1fgka_ 78 HKNIINLLGACTQDGPL----------------YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 141 (299)
T ss_dssp CTTBCCEEEEECSSSSC----------------EEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHH
T ss_pred CCeEEecccccccCCeE----------------EEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHH
Confidence 99999999887654432 45999999999999997543 258999999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 336 ~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
+||+.||+|||++|||||||||+|||++.++.+||+|||+++.......
T Consensus 142 ~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~------------------------------- 190 (299)
T d1fgka_ 142 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY------------------------------- 190 (299)
T ss_dssp HHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCT-------------------------------
T ss_pred HHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhcccccccc-------------------------------
Confidence 9999999999999999999999999999999999999999875431100
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
........||
T Consensus 191 ----------------------------------------------------------------------~~~~~~~~~~ 200 (299)
T d1fgka_ 191 ----------------------------------------------------------------------YKKTTNGRLP 200 (299)
T ss_dssp ----------------------------------------------------------------------TCCCTTSCCG
T ss_pred ----------------------------------------------------------------------ccccccCCCC
Confidence 0001345788
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
+.|+|||.+.++.|+.++|||||||+||||++ |.+||.. .......+..+..++.....++.+.+||.+||++||++
T Consensus 201 ~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~ 280 (299)
T d1fgka_ 201 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQ 280 (299)
T ss_dssp GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGG
T ss_pred hhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhH
Confidence 99999999999999999999999999999998 6777742 23344555555555554556688999999999999999
Q ss_pred CCChhHHhh
Q 002843 573 RPTTREILQ 581 (874)
Q Consensus 573 RPTa~EiL~ 581 (874)
|||+.|||+
T Consensus 281 Rps~~eil~ 289 (299)
T d1fgka_ 281 RPTFKQLVE 289 (299)
T ss_dssp SCCHHHHHH
T ss_pred CcCHHHHHH
Confidence 999999987
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-36 Score=319.17 Aligned_cols=211 Identities=12% Similarity=0.013 Sum_probs=166.3
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
....+..++....||+++.++..... .. -+++||||++|+|.+++......+++.+++.++.|
T Consensus 57 ~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~----------------~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~q 119 (273)
T d1u46a_ 57 DFIREVNAMHSLDHRNLIRLYGVVLT-PP----------------MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119 (273)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEECS-SS----------------CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEEEEEEee-cc----------------hheeeeeecCcchhhhhhcccCCCCHHHHHHHHHH
Confidence 45667788889999999999876542 22 15699999999999998765557999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 120 i~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~--------------------------------- 166 (273)
T d1u46a_ 120 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD--------------------------------- 166 (273)
T ss_dssp HHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC---------------------------------
T ss_pred HHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCC---------------------------------
Confidence 99999999999999999999999999999999999999885431100
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.........|+.+
T Consensus 167 -------------------------------------------------------------------~~~~~~~~~~~~~ 179 (273)
T d1u46a_ 167 -------------------------------------------------------------------HYVMQEHRKVPFA 179 (273)
T ss_dssp -------------------------------------------------------------------EEEC-----CCGG
T ss_pred -------------------------------------------------------------------cceecCccccCcc
Confidence 0000124467889
Q ss_pred ccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH--HHHHHHHhh-cCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 002843 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLR-DRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (874)
Q Consensus 498 Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~--~~~~~~~l~-~~~lpp~~~~~~p~l~dLi~~cL~~dP~~R 573 (874)
|+|||++.+..++.++|||||||++|||+| |..||.. ....+..+. ....++.....++.+.+||.+||++||++|
T Consensus 180 ~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 259 (273)
T d1u46a_ 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 259 (273)
T ss_dssp GCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred cCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHC
Confidence 999999999999999999999999999998 8999843 222334443 344444445566889999999999999999
Q ss_pred CChhHHhhhHHHHh
Q 002843 574 PTTREILQSEVTNE 587 (874)
Q Consensus 574 PTa~EiL~hp~~~~ 587 (874)
||+.||+ +++.+
T Consensus 260 Pt~~ei~--~~L~~ 271 (273)
T d1u46a_ 260 PTFVALR--DFLLE 271 (273)
T ss_dssp CCHHHHH--HHHHH
T ss_pred cCHHHHH--HHHHh
Confidence 9999985 45554
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-35 Score=321.42 Aligned_cols=220 Identities=14% Similarity=0.076 Sum_probs=171.6
Q ss_pred hhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHH
Q 002843 254 SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLY 333 (874)
Q Consensus 254 ~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~ 333 (874)
.+..+...+..++....||+++.++......... .+++||||+||+|.+++......+++.+++.
T Consensus 70 ~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~---------------~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~ 134 (311)
T d1r0pa_ 70 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS---------------PLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 134 (311)
T ss_dssp HHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTE---------------EEEEEECCTTCBHHHHHHCTTCCCBHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCc---------------eEEEEEEeecCchhhhhccccccchHHHHHH
Confidence 3445567788889999999999998765422111 2579999999999999987766889999999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhh
Q 002843 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (874)
Q Consensus 334 I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k 413 (874)
++.||+.||.|||+.+|+||||||+||||+.++.+||+|||+++.......
T Consensus 135 i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~----------------------------- 185 (311)
T d1r0pa_ 135 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF----------------------------- 185 (311)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTC-----------------------------
T ss_pred HHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhcccccc-----------------------------
Confidence 999999999999999999999999999999999999999999975431100
Q ss_pred hhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccc
Q 002843 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (874)
Q Consensus 414 ~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~ 493 (874)
..........
T Consensus 186 ----------------------------------------------------------------------~~~~~~~~~~ 195 (311)
T d1r0pa_ 186 ----------------------------------------------------------------------DSVHNKTGAK 195 (311)
T ss_dssp ----------------------------------------------------------------------CCTTCTTCSS
T ss_pred ----------------------------------------------------------------------ccceeccccc
Confidence 0000013457
Q ss_pred ccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH---HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCC
Q 002843 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL---AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (874)
Q Consensus 494 GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~---~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP 570 (874)
||+.|+|||++.+..++.++|||||||+||||+||..|+... ......+..+..++......+.+.+||.+||+.||
T Consensus 196 gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP 275 (311)
T d1r0pa_ 196 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKA 275 (311)
T ss_dssp CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred ccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCH
Confidence 899999999999999999999999999999999975554221 12233444444444444556789999999999999
Q ss_pred CCCCChhHHhhhHHHHhhH
Q 002843 571 LSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 571 ~~RPTa~EiL~hp~~~~~~ 589 (874)
++||++.||+++ ++.+.
T Consensus 276 ~~RPs~~ei~~~--L~~i~ 292 (311)
T d1r0pa_ 276 EMRPSFSELVSR--ISAIF 292 (311)
T ss_dssp GGSCCHHHHHHH--HHHHH
T ss_pred hHCcCHHHHHHH--HHHHH
Confidence 999999999987 44443
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-35 Score=320.81 Aligned_cols=206 Identities=17% Similarity=0.096 Sum_probs=167.0
Q ss_pred HHHHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhC-------------
Q 002843 257 ALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR------------- 322 (874)
Q Consensus 257 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~------------- 322 (874)
.....+...+... .||+++.++.....++.. +++||||+||+|.++|...
T Consensus 55 ~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~----------------~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~ 118 (309)
T d1fvra_ 55 RDFAGELEVLCKLGHHPNIINLLGACEHRGYL----------------YLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 118 (309)
T ss_dssp CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE----------------EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHT
T ss_pred HHHHHHHHHHHhccCCCCEeeEEEEEecCCee----------------EEEEEecCCCcHHHHHhhccccccchhhhccc
Confidence 3455666677765 699999999887755443 4599999999999999754
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccc
Q 002843 323 --GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSA 400 (874)
Q Consensus 323 --~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ 400 (874)
...+++.++++++.||+.||.|||++|||||||||+|||++.++.+||+|||+++.....
T Consensus 119 ~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~------------------ 180 (309)
T d1fvra_ 119 STASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY------------------ 180 (309)
T ss_dssp TBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEE------------------
T ss_pred cccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEcccccccccccc------------------
Confidence 247999999999999999999999999999999999999999999999999998632200
Q ss_pred hhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccc
Q 002843 401 EEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSN 480 (874)
Q Consensus 401 ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~ 480 (874)
T Consensus 181 -------------------------------------------------------------------------------- 180 (309)
T d1fvra_ 181 -------------------------------------------------------------------------------- 180 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCC-CchH--HHHHHHHHhhcCCCCCCCCCCCHH
Q 002843 481 TAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRF-DSER--ALAAAMSDLRDRILPPSFLSENPK 557 (874)
Q Consensus 481 ~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~-~p~~--~~~~~~~~l~~~~lpp~~~~~~p~ 557 (874)
.......||..|+|||.+.++.|+.++|||||||++|||++|. +||. .....+..+..+..++.....++.
T Consensus 181 ------~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 254 (309)
T d1fvra_ 181 ------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDE 254 (309)
T ss_dssp ------CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHH
T ss_pred ------ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCCccCCHH
Confidence 0002346788999999999999999999999999999999975 5663 233445566666555555566788
Q ss_pred HHHHHHHccccCCCCCCChhHHhhh
Q 002843 558 EAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 558 l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
+.+||.+||+.||++|||+.|||++
T Consensus 255 ~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 255 VYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHH
Confidence 9999999999999999999999987
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-35 Score=318.64 Aligned_cols=256 Identities=14% Similarity=0.126 Sum_probs=184.1
Q ss_pred cCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCC-ChhHHHHHHHHhHHhhc-CCCC
Q 002843 197 SHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASN-ASPK 273 (874)
Q Consensus 197 ~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~l~~~~-~~~~ 273 (874)
+++.+.. +.|.+|+| |.||+|..............+++.++... ..+......+..++... .||+
T Consensus 21 ~~~~~~l~~~iG~G~f------------g~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~Hpn 88 (311)
T d1t46a_ 21 PRNRLSFGKTLGAGAF------------GKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88 (311)
T ss_dssp CGGGEEEEEEEEECSS------------EEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTT
T ss_pred CHHHeEEeeEEeecCC------------eEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCC
Confidence 3444444 56666644 77888752111111122233334444333 33444456666677766 6999
Q ss_pred CceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC-----------------CCCCHHHHHHHHH
Q 002843 274 PVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-----------------HKGKRIECLYIFR 336 (874)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~-----------------~~lse~e~~~I~~ 336 (874)
++.++.....+.. .+++||||+||+|.++|.... ..+++.+++.|+.
T Consensus 89 Iv~~~g~~~~~~~----------------~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 152 (311)
T d1t46a_ 89 IVNLLGACTIGGP----------------TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY 152 (311)
T ss_dssp BCCEEEEECSSSS----------------CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHH
T ss_pred EEEEEEEEeeCCE----------------EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHH
Confidence 9999888653322 257999999999999997642 1589999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++|||||||||+|||++.++.+|++|||+++.......
T Consensus 153 qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~-------------------------------- 200 (311)
T d1t46a_ 153 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN-------------------------------- 200 (311)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT--------------------------------
T ss_pred HHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCCCc--------------------------------
Confidence 999999999999999999999999999999999999999874330000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
....+...||+
T Consensus 201 ---------------------------------------------------------------------~~~~~~~~gt~ 211 (311)
T d1t46a_ 201 ---------------------------------------------------------------------YVVKGNARLPV 211 (311)
T ss_dssp ---------------------------------------------------------------------SEECSSSEECG
T ss_pred ---------------------------------------------------------------------ceEeeecccCh
Confidence 00013457899
Q ss_pred cccCcccccCCCCCCccchhHHHHHHHHhcC-CCCchHH---HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA---LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 497 ~Y~APEvl~g~~ys~kSDIwSLGVIL~ELlt-G~~p~~~---~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
.|+|||++.++.++.++|||||||+||||+| |.+|+.. .......+..+..++.....++.+.+||.+||++||.+
T Consensus 212 ~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~ 291 (311)
T d1t46a_ 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK 291 (311)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred HHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhH
Confidence 9999999999899999999999999999998 5665532 12223333444444433445678999999999999999
Q ss_pred CCChhHHhh
Q 002843 573 RPTTREILQ 581 (874)
Q Consensus 573 RPTa~EiL~ 581 (874)
|||+.|||+
T Consensus 292 RPs~~~il~ 300 (311)
T d1t46a_ 292 RPTFKQIVQ 300 (311)
T ss_dssp SCCHHHHHH
T ss_pred CcCHHHHHH
Confidence 999999986
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-35 Score=317.51 Aligned_cols=222 Identities=13% Similarity=0.084 Sum_probs=160.3
Q ss_pred HHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHH
Q 002843 258 LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQ 337 (874)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~Q 337 (874)
+...+..++....||+++.++........... .+...-+++||||.++.+..+... ...+++.+++.|++|
T Consensus 55 ~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~--------~~~~~~~iv~e~~~~~~~~~~~~~-~~~~~~~~~~~i~~q 125 (318)
T d3blha1 55 TALREIKILQLLKHENVVNLIEICRTKASPYN--------RCKGSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQM 125 (318)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEEEC------------------CEEEEEECCCEEHHHHHTCT-TCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCccceEeeeeccccccc--------ccCceEEEEEeccCCCccchhhhc-ccccccHHHHHHHHH
Confidence 34556677888899999998877653322111 011123689999997766654444 447999999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhc
Q 002843 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (874)
Q Consensus 338 Il~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl 417 (874)
|+.||.|||++|||||||||+|||++.++.+|++|||+++.......
T Consensus 126 il~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~--------------------------------- 172 (318)
T d3blha1 126 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN--------------------------------- 172 (318)
T ss_dssp HHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC------------------------------------
T ss_pred HHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecccccc---------------------------------
Confidence 99999999999999999999999999999999999999874331000
Q ss_pred ccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccccc
Q 002843 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (874)
Q Consensus 418 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~ 497 (874)
.. .......+||++
T Consensus 173 ---------------------~~---------------------------------------------~~~~~~~~gT~~ 186 (318)
T d3blha1 173 ---------------------SQ---------------------------------------------PNRYTNRVVTLW 186 (318)
T ss_dssp --------------------------------------------------------------------CCCCCSCCSCGG
T ss_pred ---------------------cc---------------------------------------------cccccceecCHH
Confidence 00 000134589999
Q ss_pred ccCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHH--HH---HHHHhhcCCCCCCCC-------------------
Q 002843 498 YASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERAL--AA---AMSDLRDRILPPSFL------------------- 552 (874)
Q Consensus 498 Y~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~--~~---~~~~l~~~~lpp~~~------------------- 552 (874)
|+|||++.+. .|+.++|||||||++|||++|..||... .. .+..+.....+....
T Consensus 187 Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T d3blha1 187 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKR 266 (318)
T ss_dssp GCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCB
T ss_pred HhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccc
Confidence 9999999875 5899999999999999999999998421 11 122222111111100
Q ss_pred ---------CCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHh
Q 002843 553 ---------SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (874)
Q Consensus 553 ---------~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~ 587 (874)
...+.+.+||.+||.+||++|||+.|+|+||||+.
T Consensus 267 ~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~ 310 (318)
T d3blha1 267 KVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 310 (318)
T ss_dssp CHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred cchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence 01345679999999999999999999999999984
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.4e-35 Score=315.40 Aligned_cols=258 Identities=16% Similarity=0.119 Sum_probs=190.6
Q ss_pred ccCCCeeE-EEeccCCchhHHHHhhcCCceEEEecCCCCcccccccccccccccccCC-ChhHHHHHHHHhHHhhcCCCC
Q 002843 196 LSHGSIRT-KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPK 273 (874)
Q Consensus 196 ~~~~~~~~-~~~s~~~f~e~~~~~~~kgkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~l~~~~~~~~ 273 (874)
++++.+.. +.|.+|+| |.||+|......+.......+++.++... ..+......+..++....||+
T Consensus 17 i~~~~~~l~~~lG~G~f------------G~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~n 84 (308)
T d1p4oa_ 17 VAREKITMSRELGQGSF------------GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 84 (308)
T ss_dssp CCGGGEEEEEEEEECSS------------SEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTT
T ss_pred ecHHHeEEeeEEeeCCC------------eEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCC
Confidence 45556655 77777655 66888763111111112223333333332 223334567888899999999
Q ss_pred CceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCC---------CCCCHHHHHHHHHHHHHHHHH
Q 002843 274 PVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------HKGKRIECLYIFRQIVALVDY 344 (874)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~---------~~lse~e~~~I~~QIl~aL~y 344 (874)
++.+......+.. .+++||||++|+|.+++.... ..+++..+..|+.||+.||.|
T Consensus 85 Iv~~~~~~~~~~~----------------~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~ 148 (308)
T d1p4oa_ 85 VVRLLGVVSQGQP----------------TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAY 148 (308)
T ss_dssp BCCEEEEECSSSS----------------CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred EeeeeeEEecCCc----------------eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHH
Confidence 9999887653333 356999999999999996421 257899999999999999999
Q ss_pred HHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccc
Q 002843 345 HHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (874)
Q Consensus 345 LHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~ 424 (874)
||+++|+||||||+|||++.++++||+|||+++.+.+...
T Consensus 149 LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~---------------------------------------- 188 (308)
T d1p4oa_ 149 LNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY---------------------------------------- 188 (308)
T ss_dssp HHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGC----------------------------------------
T ss_pred HhhCCeeeceEcCCceeecCCceEEEeecccceeccCCcc----------------------------------------
Confidence 9999999999999999999999999999999975441100
Q ss_pred cccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccc
Q 002843 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (874)
Q Consensus 425 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl 504 (874)
....+...||+.|+|||.+
T Consensus 189 -------------------------------------------------------------~~~~~~~~~t~~y~aPe~l 207 (308)
T d1p4oa_ 189 -------------------------------------------------------------YRKGGKGLLPVRWMSPESL 207 (308)
T ss_dssp -------------------------------------------------------------EEGGGSSEECGGGCCHHHH
T ss_pred -------------------------------------------------------------eeeccceecccccCCHHHH
Confidence 0001345789999999999
Q ss_pred cCCCCCCccchhHHHHHHHHhcCCC-CchHH--HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhh
Q 002843 505 SGGVCTTSSNIYSLGVLFFELFGRF-DSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (874)
Q Consensus 505 ~g~~ys~kSDIwSLGVIL~ELltG~-~p~~~--~~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~ 581 (874)
.++.++.++|||||||+||||+||. +|+.. ....+..+..+..++......+.+.+||.+||+.||++|||+.+|++
T Consensus 208 ~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 287 (308)
T d1p4oa_ 208 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 287 (308)
T ss_dssp HHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 9999999999999999999999984 66532 33345555555555555556688999999999999999999999997
Q ss_pred h
Q 002843 582 S 582 (874)
Q Consensus 582 h 582 (874)
+
T Consensus 288 ~ 288 (308)
T d1p4oa_ 288 S 288 (308)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=3.3e-35 Score=320.79 Aligned_cols=210 Identities=14% Similarity=0.151 Sum_probs=157.2
Q ss_pred HHHHHHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 258 LKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 258 ~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
+...+..++... .||+++.++.......... -+++||||.+++|..+. +.+++.+++.|++
T Consensus 75 ~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~--------------~~~v~e~~~~~~L~~~~----~~l~e~~i~~i~~ 136 (328)
T d3bqca1 75 KIKREIKILENLRGGPNIITLADIVKDPVSRT--------------PALVFEHVNNTDFKQLY----QTLTDYDIRFYMY 136 (328)
T ss_dssp HHHHHHHHHHHHTTSTTBCCEEEEEECTTTCS--------------EEEEEECCCSCBGGGTT----TSCCHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcEEEEEEEecCCCc--------------eeEEEeecCCCcHHHHh----cCCCHHHHHHHHH
Confidence 334455555554 5999999887765333222 25799999999997763 2699999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCC-cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~-~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
||+.||+|||++|||||||||+|||++.++ .+|++|||+++.....
T Consensus 137 qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~--------------------------------- 183 (328)
T d3bqca1 137 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--------------------------------- 183 (328)
T ss_dssp HHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT---------------------------------
T ss_pred HHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCC---------------------------------
Confidence 999999999999999999999999999765 5999999998743200
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
......+||
T Consensus 184 -----------------------------------------------------------------------~~~~~~~~t 192 (328)
T d3bqca1 184 -----------------------------------------------------------------------QEYNVRVAS 192 (328)
T ss_dssp -----------------------------------------------------------------------CCCCSCCSC
T ss_pred -----------------------------------------------------------------------CcccccccC
Confidence 001345789
Q ss_pred ccccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHH----H--HHHHHHhhc------------C--------C--
Q 002843 496 KWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERA----L--AAAMSDLRD------------R--------I-- 546 (874)
Q Consensus 496 ~~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~----~--~~~~~~l~~------------~--------~-- 546 (874)
+.|+|||.+.+.. |+.++|||||||++|||++|..||.. . ...+..+.. . .
T Consensus 193 ~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 272 (328)
T d3bqca1 193 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILG 272 (328)
T ss_dssp GGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCC
T ss_pred ccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcc
Confidence 9999999988754 79999999999999999999888621 1 101111000 0 0
Q ss_pred -----------CCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhH
Q 002843 547 -----------LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 547 -----------lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
..+.....++.+.+||.+||++||++|||++|+|+||||+.+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~ 326 (328)
T d3bqca1 273 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 326 (328)
T ss_dssp CCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSC
T ss_pred cccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence 0011122346789999999999999999999999999998754
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-35 Score=325.53 Aligned_cols=216 Identities=16% Similarity=0.113 Sum_probs=158.1
Q ss_pred HHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHH--hCCCCCCHHHHHHHHHHHH
Q 002843 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLN--ARGHKGKRIECLYIFRQIV 339 (874)
Q Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~--~~~~~lse~e~~~I~~QIl 339 (874)
+..+++...||+++.+.......+.... . ..-+++||||+|+.+..+.. .....+++.+++.|++||+
T Consensus 63 Ei~il~~l~h~niv~~~~~~~~~~~~~~-------~---~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil 132 (350)
T d1q5ka_ 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKD-------E---VYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132 (350)
T ss_dssp HHHHHHHCCCTTBCCEEEEEEEC--CCS-------C---CEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCcEEEEEEecCccCC-------c---eEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHH
Confidence 4456777889999998877543322110 0 00267999998764443332 2334799999999999999
Q ss_pred HHHHHHHHCCCcccCCCCCceEEecCC-cEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcc
Q 002843 340 ALVDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (874)
Q Consensus 340 ~aL~yLHs~gIIHRDLKPsNILL~~~~-~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~ 418 (874)
.||+|||++|||||||||+||||+.++ .+||+|||+++.+...
T Consensus 133 ~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~------------------------------------ 176 (350)
T d1q5ka_ 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG------------------------------------ 176 (350)
T ss_dssp HHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTT------------------------------------
T ss_pred HHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCC------------------------------------
Confidence 999999999999999999999999775 8999999998643200
Q ss_pred cccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccc
Q 002843 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (874)
Q Consensus 419 ~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y 498 (874)
......+||+.|
T Consensus 177 --------------------------------------------------------------------~~~~~~~gt~~y 188 (350)
T d1q5ka_ 177 --------------------------------------------------------------------EPNVSYICSRYY 188 (350)
T ss_dssp --------------------------------------------------------------------SCCCSCCSCTTS
T ss_pred --------------------------------------------------------------------cccccccccccc
Confidence 000245789999
Q ss_pred cCcccccCC-CCCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhh---------------c----CCCCC-------
Q 002843 499 ASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLR---------------D----RILPP------- 549 (874)
Q Consensus 499 ~APEvl~g~-~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~---------------~----~~lpp------- 549 (874)
+|||++.+. .|+.++|||||||++|||++|.+||.... ..+..+. . ..++.
T Consensus 189 ~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (350)
T d1q5ka_ 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 268 (350)
T ss_dssp CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGG
T ss_pred cChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchh
Confidence 999998764 58999999999999999999999883211 1111110 0 01110
Q ss_pred --CCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhh
Q 002843 550 --SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (874)
Q Consensus 550 --~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~ 591 (874)
.....++.+.+||.+||.+||++|||+.|+|+||||+++.+.
T Consensus 269 ~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~ 312 (350)
T d1q5ka_ 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDP 312 (350)
T ss_dssp GTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCT
T ss_pred hhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccCC
Confidence 112345778999999999999999999999999999987654
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-35 Score=320.56 Aligned_cols=211 Identities=18% Similarity=0.152 Sum_probs=163.2
Q ss_pred HHhHHhhc-CCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 002843 262 GAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (874)
Q Consensus 262 ~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~ 340 (874)
+...+... .+|+++.+......+... +++||||.||+|.+++...+ .+++..++.+++||+.
T Consensus 78 E~~il~~l~h~pnIv~~~~~~~~~~~~----------------~~v~e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~ 140 (322)
T d1vzoa_ 78 ERQVLEHIRQSPFLVTLHYAFQTETKL----------------HLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVL 140 (322)
T ss_dssp HHHHHHHHHTCTTBCCEEEEEEETTEE----------------EEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCeEEEeeeeeccCCce----------------eeeeecccccHHHHHHHhcc-cccHHHHHHHHHHHHH
Confidence 33344444 447888888776655443 35999999999999998876 7899999999999999
Q ss_pred HHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccc
Q 002843 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (874)
Q Consensus 341 aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~ 420 (874)
||+|||++|||||||||+|||++.++.+||+|||+++.+.....
T Consensus 141 al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~------------------------------------ 184 (322)
T d1vzoa_ 141 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET------------------------------------ 184 (322)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG------------------------------------
T ss_pred HHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhccccc------------------------------------
Confidence 99999999999999999999999999999999999874431000
Q ss_pred cccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccC
Q 002843 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (874)
Q Consensus 421 ~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~A 500 (874)
.......|++.|+|
T Consensus 185 ------------------------------------------------------------------~~~~~~~g~~~~~~ 198 (322)
T d1vzoa_ 185 ------------------------------------------------------------------ERAYDFCGTIEYMA 198 (322)
T ss_dssp ------------------------------------------------------------------GGGCGGGSCCTTCC
T ss_pred ------------------------------------------------------------------ccccccccccccch
Confidence 00134578899999
Q ss_pred cccccCCC--CCCccchhHHHHHHHHhcCCCCchHHH------HHHHHHhhcCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 002843 501 PEELSGGV--CTTSSNIYSLGVLFFELFGRFDSERAL------AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (874)
Q Consensus 501 PEvl~g~~--ys~kSDIwSLGVIL~ELltG~~p~~~~------~~~~~~l~~~~lpp~~~~~~p~l~dLi~~cL~~dP~~ 572 (874)
||++.+.. ++.++|||||||+||||++|..||... ........ ...++.....++.+.+||.+||.+||.+
T Consensus 199 pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~~l~~dP~~ 277 (322)
T d1vzoa_ 199 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL-KSEPPYPQEMSALAKDLIQRLLMKDPKK 277 (322)
T ss_dssp HHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred hHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcc-cCCCCCcccCCHHHHHHHHHHcccCHHH
Confidence 99998653 688999999999999999999998321 11111111 2222333346788999999999999999
Q ss_pred CC-----ChhHHhhhHHHHhhHhhh
Q 002843 573 RP-----TTREILQSEVTNEFQEVC 592 (874)
Q Consensus 573 RP-----Ta~EiL~hp~~~~~~~~~ 592 (874)
|| |++|+|+||||+.+....
T Consensus 278 R~s~~~~t~~eil~Hpff~~i~~~~ 302 (322)
T d1vzoa_ 278 RLGCGPRDADEIKEHLFFQKINWDD 302 (322)
T ss_dssp STTSSTTTHHHHHTSGGGTTCCHHH
T ss_pred cCCCCcccHHHHHcCHhhcCCCHHH
Confidence 99 589999999999866443
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-35 Score=320.00 Aligned_cols=217 Identities=16% Similarity=0.224 Sum_probs=163.4
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.+...+..++....||+++.+........... ....+++||||.||+|.+++..+ .+++.+++.|++
T Consensus 62 ~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~-----------~~~~~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~ 128 (348)
T d2gfsa1 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLE-----------EFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIY 128 (348)
T ss_dssp HHHHHHHHHHHHCCCTTBCCCSEEECSCSSTT-----------TCCCCEEEEECCSEEHHHHHTTC--CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCeeeEEEEEeeccccc-----------cCceEEEEEeecCCchhhhcccc--cccHHHHHHHHH
Confidence 34566778888999999998877654322211 01124578889999999999664 699999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
||+.||+|||++|||||||||+|||++.++.+|++|||++.....
T Consensus 129 qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~----------------------------------- 173 (348)
T d2gfsa1 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----------------------------------- 173 (348)
T ss_dssp HHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTG-----------------------------------
T ss_pred HHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCc-----------------------------------
Confidence 999999999999999999999999999999999999998753220
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
......||+
T Consensus 174 -----------------------------------------------------------------------~~~~~~g~~ 182 (348)
T d2gfsa1 174 -----------------------------------------------------------------------EMTGYVATR 182 (348)
T ss_dssp -----------------------------------------------------------------------GGSSSCHHH
T ss_pred -----------------------------------------------------------------------ccccccccc
Confidence 003457899
Q ss_pred cccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchHHHH--HHHHHhhc---C----------------------CCC
Q 002843 497 WYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERALA--AAMSDLRD---R----------------------ILP 548 (874)
Q Consensus 497 ~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~~~~--~~~~~l~~---~----------------------~lp 548 (874)
.|+|||++.+.. ++.++|||||||++|+|++|.+||.... .....+.. . ..+
T Consensus 183 ~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (348)
T d2gfsa1 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP 262 (348)
T ss_dssp HTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCC
T ss_pred cccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCC
Confidence 999999987765 6899999999999999999999873211 11111110 0 000
Q ss_pred -----CCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhhHhhh
Q 002843 549 -----PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (874)
Q Consensus 549 -----p~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~~~~~ 592 (874)
..+...++.+.+||.+||++||.+|||+.|+|+||||++.....
T Consensus 263 ~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~ 311 (348)
T d2gfsa1 263 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311 (348)
T ss_dssp CCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTT
T ss_pred CcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCc
Confidence 01234567889999999999999999999999999999876543
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-34 Score=308.55 Aligned_cols=212 Identities=16% Similarity=0.145 Sum_probs=164.9
Q ss_pred HHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHH
Q 002843 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (874)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~ 336 (874)
.+...+..+++...||+++.+.......... +++||++.|++|..++...+ .+++.+++.+++
T Consensus 46 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~----------------~iv~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~ 108 (292)
T d1unla_ 46 SSALREICLLKELKHKNIVRLHDVLHSDKKL----------------TLVFEFCDQDLKKYFDSCNG-DLDPEIVKSFLF 108 (292)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEEEEECSSEE----------------EEEEECCSEEHHHHHHHTTT-CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcCCEEeeccccccccce----------------eEEeeecccccccccccccc-ccchhHHHHHHH
Confidence 4456677888999999999988776644432 46999999999998887665 799999999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhh
Q 002843 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (874)
Q Consensus 337 QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~k 416 (874)
|++.||+|||++|||||||||+|||++.++.+|++|||.++......
T Consensus 109 q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~--------------------------------- 155 (292)
T d1unla_ 109 QLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--------------------------------- 155 (292)
T ss_dssp HHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC---------------------------------
T ss_pred HHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCC---------------------------------
Confidence 99999999999999999999999999999999999999987433000
Q ss_pred cccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCcccccccccccccccccccc
Q 002843 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (874)
Q Consensus 417 l~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~ 496 (874)
.......+++
T Consensus 156 ----------------------------------------------------------------------~~~~~~~~~~ 165 (292)
T d1unla_ 156 ----------------------------------------------------------------------RCYSAEVVTL 165 (292)
T ss_dssp ----------------------------------------------------------------------SCCCSCCSCG
T ss_pred ----------------------------------------------------------------------ccceeecccc
Confidence 0002345678
Q ss_pred cccCcccccCCC-CCCccchhHHHHHHHHhcCCCCchH---HHHHHHHHhh---cCC-----------------------
Q 002843 497 WYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSER---ALAAAMSDLR---DRI----------------------- 546 (874)
Q Consensus 497 ~Y~APEvl~g~~-ys~kSDIwSLGVIL~ELltG~~p~~---~~~~~~~~l~---~~~----------------------- 546 (874)
.|+|||++.+.. ++.++|||||||++|||++|..||. .....+..+. ...
T Consensus 166 ~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (292)
T d1unla_ 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT 245 (292)
T ss_dssp GGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTT
T ss_pred chhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccccccccc
Confidence 999999998765 6899999999999999999987751 1111122211 110
Q ss_pred --CCCCCCCCCHHHHHHHHHccccCCCCCCChhHHhhhHHHHhh
Q 002843 547 --LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (874)
Q Consensus 547 --lpp~~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL~hp~~~~~ 588 (874)
........++.+.+|+.+||++||.+||||.|+|+||||+++
T Consensus 246 ~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~ 289 (292)
T d1unla_ 246 TSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSC
T ss_pred chhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCC
Confidence 001112334678899999999999999999999999999864
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-34 Score=314.20 Aligned_cols=240 Identities=14% Similarity=0.089 Sum_probs=167.1
Q ss_pred CceEEEecCCCCcccccccccccccccccCCChhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccC
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (874)
|.|.||||.. ++...+++.++.+..... ....+...+....||+++.++.....++....
T Consensus 15 ~fg~Vy~~~~-------~g~~vAvK~~~~~~~~~~-~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~------------ 74 (303)
T d1vjya_ 15 RFGEVWRGKW-------RGEEVAVKIFSSREERSW-FREAEIYQTVMLRHENILGFIAADNKDNGTWT------------ 74 (303)
T ss_dssp SSSEEEEEEE-------TTEEEEEEEECGGGHHHH-HHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE------------
T ss_pred CCeEEEEEEE-------CCEEEEEEEECccchhHH-HHHHHHHHHhhCCCCcCcceEEEEEeCCCcce------------
Confidence 3466788763 233334444433321111 11223334456689999999887664432110
Q ss_pred CCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCcccCCCCCceEEecCCcEEEecc
Q 002843 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT--------QGVTFLDLKPSSFKLLQSNQVKYIGP 373 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs--------~gIIHRDLKPsNILL~~~~~vKLiDF 373 (874)
-.+++||||++|+|.++|++. .+++.+++.++.|++.||+|||+ +|||||||||+||||+.++.+||+||
T Consensus 75 ~~~lv~Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DF 152 (303)
T d1vjya_ 75 QLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEec
Confidence 026799999999999999876 59999999999999999999997 59999999999999999999999999
Q ss_pred ccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCC
Q 002843 374 IIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPH 453 (874)
Q Consensus 374 Glar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 453 (874)
|+++....... .
T Consensus 153 Gl~~~~~~~~~-------------------------------------------------------~------------- 164 (303)
T d1vjya_ 153 GLAVRHDSATD-------------------------------------------------------T------------- 164 (303)
T ss_dssp TTCEEEETTTT-------------------------------------------------------E-------------
T ss_pred CccccccCCCc-------------------------------------------------------c-------------
Confidence 99875431000 0
Q ss_pred CCCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCC------CCCCccchhHHHHHHHHhcC
Q 002843 454 SHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG------VCTTSSNIYSLGVLFFELFG 527 (874)
Q Consensus 454 ~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~------~ys~kSDIwSLGVIL~ELlt 527 (874)
........+||+.|+|||++.+. .++.++|||||||+||||+|
T Consensus 165 -------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~t 213 (303)
T d1vjya_ 165 -------------------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213 (303)
T ss_dssp -------------------------------ECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------eeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhh
Confidence 00001356899999999998864 26789999999999999999
Q ss_pred CCCchH-----------------HHHHHHHHhhcCCCCCCCCCCC------HHHHHHHHHccccCCCCCCChhHHhhh
Q 002843 528 RFDSER-----------------ALAAAMSDLRDRILPPSFLSEN------PKEAGFCLWQLHPEPLSRPTTREILQS 582 (874)
Q Consensus 528 G~~p~~-----------------~~~~~~~~l~~~~lpp~~~~~~------p~l~dLi~~cL~~dP~~RPTa~EiL~h 582 (874)
|.+|+. ........+....+.|.+.... ..+.+|+.+||..||++|||+.||+++
T Consensus 214 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~ 291 (303)
T d1vjya_ 214 RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp TBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred CCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 976641 1112222333334434333221 247899999999999999999999764
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.5e-33 Score=303.63 Aligned_cols=216 Identities=12% Similarity=0.044 Sum_probs=154.5
Q ss_pred HHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccccCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHH
Q 002843 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (874)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QI 338 (874)
...+..++....|++.+..+.....++.. .+++||||. ++|.+++......+++.+++.++.||
T Consensus 49 ~~~E~~i~~~l~~~~~i~~~~~~~~~~~~---------------~~ivme~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi 112 (299)
T d1ckia_ 49 LHIESKIYKMMQGGVGIPTIRWCGAEGDY---------------NVMVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQM 112 (299)
T ss_dssp HHHHHHHHHHSTTSTTCCCEEEEEEETTE---------------EEEEEECCC-CBHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCcccEEEEEEecCCE---------------EEEEEEEcC-CchhhhhhhccCCCcHHHHHHHHHHH
Confidence 44556677777777766554443323322 256999995 67877777666689999999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCceEEec---CCcEEEeccccchhccccccCCCCcchhhhhhcccchhhhccccchhhhhh
Q 002843 339 VALVDYHHTQGVTFLDLKPSSFKLLQ---SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (874)
Q Consensus 339 l~aL~yLHs~gIIHRDLKPsNILL~~---~~~vKLiDFGlar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~ 415 (874)
+.||+|||++|||||||||+|||++. +..+|++|||+++.+.+...
T Consensus 113 ~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~------------------------------- 161 (299)
T d1ckia_ 113 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART------------------------------- 161 (299)
T ss_dssp HHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTT-------------------------------
T ss_pred HHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecccccc-------------------------------
Confidence 99999999999999999999999864 45699999999985441100
Q ss_pred hcccccccccccccCCCccCCccccccccccccccCCCCCCCCcccccccCcCCCCCCCCCccccccccccccccccccc
Q 002843 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (874)
Q Consensus 416 kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT 495 (874)
.. ..........+||
T Consensus 162 -------------------------~~----------------------------------------~~~~~~~~~~~gt 176 (299)
T d1ckia_ 162 -------------------------HQ----------------------------------------HIPYRENKNLTGT 176 (299)
T ss_dssp -------------------------CC----------------------------------------BCCCCBCCSCCCC
T ss_pred -------------------------cc----------------------------------------ceeccccCCcCCC
Confidence 00 0000111456899
Q ss_pred ccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHH-----HHHHHHhhc----CCCCCCCCCCCHHHHHHHHHcc
Q 002843 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL-----AAAMSDLRD----RILPPSFLSENPKEAGFCLWQL 566 (874)
Q Consensus 496 ~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~-----~~~~~~l~~----~~lpp~~~~~~p~l~dLi~~cL 566 (874)
+.|||||++.+..|+.++|||||||++|||++|..||... ......... ...+......++.+.+||.+||
T Consensus 177 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl 256 (299)
T d1ckia_ 177 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR 256 (299)
T ss_dssp SSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred ccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHc
Confidence 9999999999989999999999999999999999988321 111111111 1111112344577899999999
Q ss_pred ccCCCCCCChhHH---hhhHHHH
Q 002843 567 HPEPLSRPTTREI---LQSEVTN 586 (874)
Q Consensus 567 ~~dP~~RPTa~Ei---L~hp~~~ 586 (874)
..+|++||++.++ |+|+|.+
T Consensus 257 ~~~p~~RP~~~~i~~~l~~~~~~ 279 (299)
T d1ckia_ 257 SLRFDDKPDYSYLRQLFRNLFHR 279 (299)
T ss_dssp HSCTTCCCCHHHHHHHHHHHHHH
T ss_pred cCChhHCcCHHHHHHHHHHHHHH
Confidence 9999999998755 5566543
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-33 Score=308.00 Aligned_cols=246 Identities=13% Similarity=0.131 Sum_probs=166.4
Q ss_pred CceEEEecCCCCcccccccccccccccccCCC--hhHHHHHHHHhHHhhcCCCCCceeccceeecCcccCCcCCCCCccc
Q 002843 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (874)
Q Consensus 222 gkGvv~kg~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (874)
+.|+||+|.. .. .++..+.+.+..... ....+...+..++....||+++.+.......+....
T Consensus 29 ~fg~V~~~~d----~~-t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~---------- 93 (355)
T d2b1pa1 29 AQGIVCAAYD----AV-LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE---------- 93 (355)
T ss_dssp --CEEEEEEE----TT-TTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT----------
T ss_pred cCeEEEEEEE----CC-CCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEeccccccc----------
Confidence 3477888851 11 122333333333221 122334566678888999999999887654332110
Q ss_pred cCCCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhc
Q 002843 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (874)
Q Consensus 300 ~~~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~ 379 (874)
....|++||||.|+.| +.+. ..+++.+++.+++||+.||+|||++||+||||||+|||++.++.+|++|||+++..
T Consensus 94 ~~~~~iv~Ey~~~~l~-~~~~---~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~ 169 (355)
T d2b1pa1 94 FQDVYLVMELMDANLC-QVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_dssp CCEEEEEEECCSEEHH-HHHT---SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred CceeEEEEeccchHHH-Hhhh---cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcc
Confidence 0113689999986544 4443 25999999999999999999999999999999999999999999999999987632
Q ss_pred cccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCCc
Q 002843 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (874)
Q Consensus 380 ~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~~ 459 (874)
...
T Consensus 170 ~~~----------------------------------------------------------------------------- 172 (355)
T d2b1pa1 170 GTS----------------------------------------------------------------------------- 172 (355)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 200
Q ss_pred ccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHHHH--H
Q 002843 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALA--A 537 (874)
Q Consensus 460 ~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~~~--~ 537 (874)
...+..+||+.|+|||++.+..++.++||||+||++|||++|..||.... .
T Consensus 173 ---------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~ 225 (355)
T d2b1pa1 173 ---------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225 (355)
T ss_dssp -----------------------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ---------------------------cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHH
Confidence 00134578999999999999999999999999999999999999883211 1
Q ss_pred HHHHh----------------------hcCCCCC-----------C-CCC-------CCHHHHHHHHHccccCCCCCCCh
Q 002843 538 AMSDL----------------------RDRILPP-----------S-FLS-------ENPKEAGFCLWQLHPEPLSRPTT 576 (874)
Q Consensus 538 ~~~~l----------------------~~~~lpp-----------~-~~~-------~~p~l~dLi~~cL~~dP~~RPTa 576 (874)
.+..+ .....+. . ... .++.+.+||.+||++||++||||
T Consensus 226 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta 305 (355)
T d2b1pa1 226 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305 (355)
T ss_dssp HHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCH
T ss_pred HHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCH
Confidence 11111 0000000 0 000 12356899999999999999999
Q ss_pred hHHhhhHHHHhhHh
Q 002843 577 REILQSEVTNEFQE 590 (874)
Q Consensus 577 ~EiL~hp~~~~~~~ 590 (874)
+|||+||||+...+
T Consensus 306 ~elL~Hpw~~~~~~ 319 (355)
T d2b1pa1 306 DDALQHPYINVWYD 319 (355)
T ss_dssp HHHHTSTTTGGGCC
T ss_pred HHHhcCcccCCCCC
Confidence 99999999997544
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.97 E-value=7.5e-32 Score=290.29 Aligned_cols=180 Identities=12% Similarity=0.065 Sum_probs=138.7
Q ss_pred ceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEec-----CCcEEEeccccchh
Q 002843 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ-----SNQVKYIGPIIQKE 378 (874)
Q Consensus 304 ~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~-----~~~vKLiDFGlar~ 378 (874)
+++|||| |++|.+++...+..+++.++..|+.|++.||+|||++|||||||||+|||++. .+.+|++|||+++.
T Consensus 77 ~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~ 155 (293)
T d1csna_ 77 VLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 155 (293)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred EEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEE
Confidence 5699999 68999999887778999999999999999999999999999999999999974 57899999999985
Q ss_pred ccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCCCCCC
Q 002843 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (874)
Q Consensus 379 ~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~d~~~ 458 (874)
..+.....
T Consensus 156 ~~~~~~~~------------------------------------------------------------------------ 163 (293)
T d1csna_ 156 YRDPVTKQ------------------------------------------------------------------------ 163 (293)
T ss_dssp SBCTTTCC------------------------------------------------------------------------
T ss_pred cccCcccc------------------------------------------------------------------------
Confidence 44110000
Q ss_pred cccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH----
Q 002843 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA---- 534 (874)
Q Consensus 459 ~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~---- 534 (874)
..........+||+.|||||++.+..++.++|||||||++|||++|..||..
T Consensus 164 ------------------------~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~ 219 (293)
T d1csna_ 164 ------------------------HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 219 (293)
T ss_dssp ------------------------BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC
T ss_pred ------------------------ceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccch
Confidence 0000111456899999999999999999999999999999999999999831
Q ss_pred -HHHHHHHhh---cCCCCCC-CCCCCHHHHHHHHHccccCCCCCCChhHHh
Q 002843 535 -LAAAMSDLR---DRILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREIL 580 (874)
Q Consensus 535 -~~~~~~~l~---~~~lpp~-~~~~~p~l~dLi~~cL~~dP~~RPTa~EiL 580 (874)
.......+. ....++. .....+.+.+|+..|+..+|++||+...+.
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~ 270 (293)
T d1csna_ 220 TNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ 270 (293)
T ss_dssp CHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred hHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence 111122221 1111111 223456789999999999999999987764
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=1.5e-29 Score=278.26 Aligned_cols=180 Identities=18% Similarity=0.140 Sum_probs=131.2
Q ss_pred ceEeeccCCCC-HHHHH-HhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCceEEecCCc------EEEeccc
Q 002843 304 LRQGSSDHGVN-LREWL-NARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQ------VKYIGPI 374 (874)
Q Consensus 304 ~lvMEy~~Ggs-L~~~L-~~~~~~lse~e~~~I~~QIl~aL~yLHs-~gIIHRDLKPsNILL~~~~~------vKLiDFG 374 (874)
+++|+++.++. ...+. ......+++..+..+++||+.||+|||+ +||+||||||+||||+.++. +|++|||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg 177 (362)
T d1q8ya_ 98 HVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG 177 (362)
T ss_dssp EEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCT
T ss_pred eeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecc
Confidence 34566655443 33333 3334479999999999999999999998 89999999999999987653 9999999
Q ss_pred cchhccccccCCCCcchhhhhhcccchhhhccccchhhhhhhcccccccccccccCCCccCCccccccccccccccCCCC
Q 002843 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (874)
Q Consensus 375 lar~~~~~~~~~~~~~d~~~~r~r~~ei~dfg~~~~~~k~~kl~~~~~s~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 454 (874)
.+.....
T Consensus 178 ~s~~~~~------------------------------------------------------------------------- 184 (362)
T d1q8ya_ 178 NACWYDE------------------------------------------------------------------------- 184 (362)
T ss_dssp TCEETTB-------------------------------------------------------------------------
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 8752210
Q ss_pred CCCCcccccccCcCCCCCCCCCcccccccccccccccccccccccCcccccCCCCCCccchhHHHHHHHHhcCCCCchHH
Q 002843 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA 534 (874)
Q Consensus 455 d~~~~~~~~~~~~~dfg~s~~p~~~~~~~~~~~~~t~~~GT~~Y~APEvl~g~~ys~kSDIwSLGVIL~ELltG~~p~~~ 534 (874)
.....+||+.|+|||++.+..|+.++|||||||+++||++|+.||..
T Consensus 185 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~ 231 (362)
T d1q8ya_ 185 ---------------------------------HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 231 (362)
T ss_dssp ---------------------------------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred ---------------------------------ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCC
Confidence 00245789999999999999999999999999999999999988743
Q ss_pred HHH---------H---HHHhhc------------------C----CCCC------------C--C-CCCCHHHHHHHHHc
Q 002843 535 LAA---------A---MSDLRD------------------R----ILPP------------S--F-LSENPKEAGFCLWQ 565 (874)
Q Consensus 535 ~~~---------~---~~~l~~------------------~----~lpp------------~--~-~~~~p~l~dLi~~c 565 (874)
... . +..+.. . .... . + ...++.+.+||.+|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~m 311 (362)
T d1q8ya_ 232 DEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPM 311 (362)
T ss_dssp -------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGG
T ss_pred CccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHH
Confidence 211 0 000000 0 0000 0 0 01124578999999
Q ss_pred cccCCCCCCChhHHhhhHHHHhhH
Q 002843 566 LHPEPLSRPTTREILQSEVTNEFQ 589 (874)
Q Consensus 566 L~~dP~~RPTa~EiL~hp~~~~~~ 589 (874)
|.+||.+||||.|+|+||||++..
T Consensus 312 L~~dP~~Rpta~e~L~Hp~f~~~~ 335 (362)
T d1q8ya_ 312 LQLDPRKRADAGGLVNHPWLKDTL 335 (362)
T ss_dssp GCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred CCCChhHCcCHHHHhcCcccCCCC
Confidence 999999999999999999999543
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.48 E-value=4.5e-15 Score=148.00 Aligned_cols=69 Identities=13% Similarity=-0.000 Sum_probs=58.7
Q ss_pred CCceEeeccCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCceEEecCCcEEEeccccchhc
Q 002843 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (874)
Q Consensus 302 ~~~lvMEy~~GgsL~~~L~~~~~~lse~e~~~I~~QIl~aL~yLHs~gIIHRDLKPsNILL~~~~~vKLiDFGlar~~ 379 (874)
+.+++|||+++..+. .++...+..++.||+.+|.|||++||+||||||+|||+++ +.++++|||++...
T Consensus 84 ~~~lvme~~~~~~~~--------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~-~~~~liDFG~a~~~ 152 (191)
T d1zara2 84 GNAVLMELIDAKELY--------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE-EGIWIIDFPQSVEV 152 (191)
T ss_dssp TTEEEEECCCCEEGG--------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET-TEEEECCCTTCEET
T ss_pred CCEEEEEeecccccc--------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC-CCEEEEECCCcccC
Confidence 357899999987653 2556667889999999999999999999999999999985 45999999998643
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.45 E-value=9.8e-14 Score=151.23 Aligned_cols=117 Identities=17% Similarity=0.160 Sum_probs=87.0
Q ss_pred hccceeeeeceeEeEEec-ccCCCCCCCCeeEEEECCCCCEEEEecCCCc---EEEeeCCCCCCC-Cc----ccccCeee
Q 002843 754 GLCKYARYSKFEVQGMLR-TGEFNNSANVICSISFDRDEDHFAAAGVSKK---IKIFEFNALFND-SV----DVYYPAVE 824 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~-~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~---Ikiwd~~~~~~~-~~----~~~~p~~~ 824 (874)
+..+++...+.+.+.++. ...+.+|++.|.+|+|+|||++|||||.|++ |+|||+.++... .+ ........
T Consensus 205 g~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~ 284 (393)
T d1sq9a_ 205 GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLG 284 (393)
T ss_dssp SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------C
T ss_pred CcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceee
Confidence 456777777888888887 5678899999999999999999999999985 999999975211 00 00011111
Q ss_pred -ecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeee
Q 002843 825 -MSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFV 871 (874)
Q Consensus 825 -~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~ 871 (874)
..|.+.|.+|+|+| ++++||||+.||+|+|||+.+++. +++|..-|
T Consensus 285 ~~gH~~~V~~l~fsp-d~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v 334 (393)
T d1sq9a_ 285 EFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDI 334 (393)
T ss_dssp CBSBSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGC
T ss_pred eecccCceeeeccCC-CCCeeEEECCCCEEEEEECCCCCEEEEECCcCCcc
Confidence 24678899999999 588999999999999999998855 66665443
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.28 E-value=2.5e-12 Score=131.78 Aligned_cols=83 Identities=7% Similarity=0.092 Sum_probs=68.5
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEE
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKV 855 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~ 855 (874)
.+|.+.|.+|+|+|||++|||||.|++|||||+.+.... ........|.+.|.||+|+|..+.+||||+.||+|++
T Consensus 8 ~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~----~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~ 83 (342)
T d1yfqa_ 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN----VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE----EEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred CCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcc----eEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceee
Confidence 467999999999999999999999999999999864210 0112234577899999999977779999999999999
Q ss_pred EeCCCcc
Q 002843 856 CMSCRLS 862 (874)
Q Consensus 856 WD~~~~~ 862 (874)
||+....
T Consensus 84 w~~~~~~ 90 (342)
T d1yfqa_ 84 VDLIGSP 90 (342)
T ss_dssp ECSSSSS
T ss_pred eeccccc
Confidence 9998653
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.27 E-value=5.3e-12 Score=128.11 Aligned_cols=90 Identities=12% Similarity=0.148 Sum_probs=75.7
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCcee
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLS 832 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~ 832 (874)
+..+++...+.+.+.++. +|.+.|.+++|+|+|++|||||.|++|+|||+.+. .++..+. |.+.|.
T Consensus 227 ~~i~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~h~~~V~ 293 (317)
T d1vyhc1 227 KTIKMWDVSTGMCLMTLV-----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK--------RCMKTLNAHEHFVT 293 (317)
T ss_dssp SEEEEEETTTTEEEEEEE-----CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS--------CCCEEEECCSSCEE
T ss_pred CEEEEEECCCCcEEEEEe-----CCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCC--------cEEEEEcCCCCCEE
Confidence 445666667777777775 35889999999999999999999999999999876 3455554 567899
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEe
Q 002843 833 CVCWNNYIKNYLASADYDGVVKVCM 857 (874)
Q Consensus 833 ~l~wnp~~~~~laS~~~Dg~V~~WD 857 (874)
+|+|+| ++++||||+.||+|+|||
T Consensus 294 ~~~~s~-~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 294 SLDFHK-TAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp EEEECS-SSSCEEEEETTSEEEEEC
T ss_pred EEEEcC-CCCEEEEEeCCCeEEEeC
Confidence 999999 578999999999999998
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.26 E-value=5.6e-12 Score=134.34 Aligned_cols=94 Identities=13% Similarity=0.225 Sum_probs=68.4
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCC-Cccccc----------CeeeecCCCceeEEEEeCCCCCEEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFND-SVDVYY----------PAVEMSNRSKLSCVCWNNYIKNYLA 845 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~-~~~~~~----------p~~~~~~~~~v~~l~wnp~~~~~la 845 (874)
+|++.|+||+|+|||++||||+ |++|+|||+.++... ....+. ......+...|.+|+|+| ++++||
T Consensus 60 ~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~-~~~~l~ 137 (388)
T d1erja_ 60 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-DGKFLA 137 (388)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT-TSSEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECC-CCCcce
Confidence 4699999999999999999987 999999999875210 000000 011123456799999999 588999
Q ss_pred EeeCCCcEEEEeCCCccc---eeeeeeeee
Q 002843 846 SADYDGVVKVCMSCRLST---YCFRKKFVF 872 (874)
Q Consensus 846 S~~~Dg~V~~WD~~~~~~---~~~~~~f~~ 872 (874)
+|+.||+|++||...++. +.++...|.
T Consensus 138 s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~ 167 (388)
T d1erja_ 138 TGAEDRLIRIWDIENRKIVMILQGHEQDIY 167 (388)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred eccccccccccccccccccccccccccccc
Confidence 999999999999998754 444454443
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=1.2e-11 Score=131.19 Aligned_cols=86 Identities=10% Similarity=0.152 Sum_probs=69.5
Q ss_pred ceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeee---ecCCCceeEEEEeCC
Q 002843 763 KFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE---MSNRSKLSCVCWNNY 839 (874)
Q Consensus 763 ~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~---~~~~~~v~~l~wnp~ 839 (874)
+.+.+.+|.| ++.|+||+|+|||++||||| |++|+|||+.+.... .++.. ..|.+.|.||+|+|
T Consensus 41 ~~~~~~~~~H------~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~-----~~~~~~~~~~h~~~I~~v~~s~- 107 (337)
T d1gxra_ 41 HARQINTLNH------GEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK-----SPVSQLDCLNRDNYIRSCKLLP- 107 (337)
T ss_dssp EEEEEEEECC------SSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC-----SCSEEEECSCTTSBEEEEEECT-
T ss_pred CceEEEECCC------CCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCccc-----ceeEEeeecCCCCcEEEEEEcC-
Confidence 4566777765 89999999999999999998 899999999875221 12222 24567899999999
Q ss_pred CCCEEEEeeCCCcEEEEeCCCc
Q 002843 840 IKNYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 840 ~~~~laS~~~Dg~V~~WD~~~~ 861 (874)
++++||+|+.||+|+|||+...
T Consensus 108 dg~~l~s~~~dg~i~iwd~~~~ 129 (337)
T d1gxra_ 108 DGCTLIVGGEASTLSIWDLAAP 129 (337)
T ss_dssp TSSEEEEEESSSEEEEEECCCC
T ss_pred CCCEEEEeeccccccccccccc
Confidence 5789999999999999999753
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.23 E-value=1.7e-11 Score=126.71 Aligned_cols=84 Identities=14% Similarity=0.200 Sum_probs=70.2
Q ss_pred eeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCC
Q 002843 764 FEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKN 842 (874)
Q Consensus 764 ~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~ 842 (874)
+++..+|+ ||.+.|.+|+|+||+.+|||||.|++|+|||+.++ ..+..+. |.+.|.+|+|+| +..
T Consensus 45 ~~~~~tL~-----GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~--------~~~~~~~~~~~~v~~v~~~~-~~~ 110 (340)
T d1tbga_ 45 MRTRRTLR-----GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTT--------NKVHAIPLRSSWVMTCAYAP-SGN 110 (340)
T ss_dssp CCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTT--------EEEEEEECSCSCEEEEEECT-TSS
T ss_pred eeeeEEEC-----CCCCCEEEEEECCCCCEEEEEECCCceeeeecccc--------eeEEEEecccccEEeeEeec-cce
Confidence 34445554 56999999999999999999999999999999976 2344444 567899999999 578
Q ss_pred EEEEeeCCCcEEEEeCCCc
Q 002843 843 YLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 843 ~laS~~~Dg~V~~WD~~~~ 861 (874)
+||+|+.|++|.+|+....
T Consensus 111 ~l~~~~~d~~i~~~~~~~~ 129 (340)
T d1tbga_ 111 YVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp EEEEEETTCCEEEEESSSS
T ss_pred eeeeecccceeeccccccc
Confidence 9999999999999998754
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.16 E-value=7e-11 Score=122.02 Aligned_cols=106 Identities=12% Similarity=0.067 Sum_probs=82.4
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee---cCCCc
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM---SNRSK 830 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~---~~~~~ 830 (874)
+..+++...+.+++.++. +|.+.|.+|+|+|+|.+|||||.|++|++||+... .++... .+...
T Consensus 206 ~~v~i~d~~~~~~~~~~~-----~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~--------~~~~~~~~~~~~~~ 272 (340)
T d1tbga_ 206 ASAKLWDVREGMCRQTFT-----GHESDINAICFFPNGNAFATGSDDATCRLFDLRAD--------QELMTYSHDNIICG 272 (340)
T ss_dssp TEEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCTTCCSC
T ss_pred ceEEEEECCCCcEEEEEe-----CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccc--------ccccccccccccCc
Confidence 444555556666666665 35889999999999999999999999999999865 122221 23456
Q ss_pred eeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeeee
Q 002843 831 LSCVCWNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 831 v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
|.+++|+| ++.+||+|+.||+|+|||+.+++. +..|..-|.+
T Consensus 273 i~~~~~s~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~ 317 (340)
T d1tbga_ 273 ITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSC 317 (340)
T ss_dssp EEEEEECS-SSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred eEEEEECC-CCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 99999999 578999999999999999998754 6667766654
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.15 E-value=6.7e-11 Score=125.12 Aligned_cols=104 Identities=14% Similarity=0.174 Sum_probs=77.7
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeE
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSC 833 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~ 833 (874)
+..+++...+.+....++ +|...|++|+|+||+++||+|+.|+.|+|||+.+......-.........|.+.|.+
T Consensus 169 ~~i~i~d~~~~~~~~~~~-----~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~ 243 (311)
T d1nr0a1 169 NTVAIFEGPPFKFKSTFG-----EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 243 (311)
T ss_dssp SCEEEEETTTBEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEE
T ss_pred cccccccccccccccccc-----cccccccccccCccccccccccccccccccccccccccccccccccccccccccccc
Confidence 344555566666666665 348899999999999999999999999999998752111000011112345678999
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 834 VCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 834 l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
|+|+| ++++||||+.||+|+|||+.+++.
T Consensus 244 ~~~s~-~~~~l~tgs~Dg~v~iwd~~t~~~ 272 (311)
T d1nr0a1 244 LTWSP-DGTKIASASADKTIKIWNVATLKV 272 (311)
T ss_dssp EEECT-TSSEEEEEETTSEEEEEETTTTEE
T ss_pred cccCC-CCCEEEEEeCCCeEEEEECCCCcE
Confidence 99999 478999999999999999998754
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=6.9e-11 Score=125.10 Aligned_cols=73 Identities=11% Similarity=0.085 Sum_probs=66.0
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVC 856 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~W 856 (874)
.|.+.|.+|+|+|||++|||||.|++|+|||+.++ .++..+.+.+.|.+++|+| ++.+||+|+.||+|+||
T Consensus 263 ~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~--------~~~~~~~~~~~v~~~~~s~-d~~~l~t~s~D~~I~vW 333 (337)
T d1gxra_ 263 LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG--------ASIFQSKESSSVLSCDISV-DDKYIVTGSGDKKATVY 333 (337)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECSSCEEEEEECT-TSCEEEEEETTSCEEEE
T ss_pred ccccccceEEECCCCCEEEEEeCCCeEEEEECCCC--------CEEEEccCCCCEEEEEEeC-CCCEEEEEeCCCeEEEE
Confidence 46889999999999999999999999999999876 4556677888999999999 57899999999999999
Q ss_pred eC
Q 002843 857 MS 858 (874)
Q Consensus 857 D~ 858 (874)
|+
T Consensus 334 dl 335 (337)
T d1gxra_ 334 EV 335 (337)
T ss_dssp EE
T ss_pred EE
Confidence 97
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.11 E-value=1.2e-10 Score=123.82 Aligned_cols=117 Identities=12% Similarity=0.076 Sum_probs=80.9
Q ss_pred ccceeeeeceeEeEEec--ccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCC-----cccccCeeeecC
Q 002843 755 LCKYARYSKFEVQGMLR--TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDS-----VDVYYPAVEMSN 827 (874)
Q Consensus 755 l~~~~ry~~~~~~~~l~--~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~-----~~~~~p~~~~~~ 827 (874)
..+++...+...+..+. .....+|.+.|.+|+|+|+|++||||+.|++|+|||+.+..... ....+......|
T Consensus 228 ~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (388)
T d1erja_ 228 AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGH 307 (388)
T ss_dssp CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECC
T ss_pred eEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccc
Confidence 34555555566666665 23456789999999999999999999999999999998752211 011112222346
Q ss_pred CCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc---eeeeeeeee
Q 002843 828 RSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST---YCFRKKFVF 872 (874)
Q Consensus 828 ~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~---~~~~~~f~~ 872 (874)
...|.+++|+| ++.+||+|+.||+|+|||+.+++. +..|..-|.
T Consensus 308 ~~~v~~~~~s~-~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~ 354 (388)
T d1erja_ 308 KDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVI 354 (388)
T ss_dssp SSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred cceEEEEEECC-CCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEE
Confidence 67899999999 478999999999999999998755 555555443
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.09 E-value=1.9e-10 Score=117.78 Aligned_cols=107 Identities=19% Similarity=0.162 Sum_probs=77.1
Q ss_pred cceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEE
Q 002843 756 CKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCV 834 (874)
Q Consensus 756 ~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l 834 (874)
.+++..........+. ..+...|.+|+|+|||.+||+|+.|++|+|||+.+.. .....+ .|...|.++
T Consensus 143 v~~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~-------~~~~~~~~h~~~v~~~ 211 (287)
T d1pgua2 143 IQVFKLSDLEVSFDLK----TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE-------VKTSRWAFRTSKINAI 211 (287)
T ss_dssp EEEEETTEEEEEEECS----SCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-------EEECCSCCCSSCEEEE
T ss_pred eeeeeccccceeeeee----eccCCceeEEEeccCccccccccccccccceeecccc-------ccccccccccccccee
Confidence 3444444444444443 2357789999999999999999999999999998752 111112 346789999
Q ss_pred EEeCCC---------CCEEEEeeCCCcEEEEeCCCcc-c---eeeeeeeeee
Q 002843 835 CWNNYI---------KNYLASADYDGVVKVCMSCRLS-T---YCFRKKFVFT 873 (874)
Q Consensus 835 ~wnp~~---------~~~laS~~~Dg~V~~WD~~~~~-~---~~~~~~f~~~ 873 (874)
+|+|.. ..+||||+.||+|+|||+.+.. . +..|..-|.+
T Consensus 212 ~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~ 263 (287)
T d1pgua2 212 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNN 263 (287)
T ss_dssp EECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEE
T ss_pred eecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEE
Confidence 999843 4689999999999999998642 2 3455555554
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.09 E-value=1.1e-10 Score=120.17 Aligned_cols=76 Identities=12% Similarity=0.113 Sum_probs=62.5
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee--cCCCceeEEEEeCCCCCEEEEeeCCCc
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM--SNRSKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~--~~~~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
+.||.+.|.+|+|+|||++|||||.|++|+|||+.++. ++..+ .|...|.+++|+|. + .+++++.|++
T Consensus 8 ~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~--------~~~~~~~~h~~~v~~v~~~~~-g-~~~~~~~d~~ 77 (299)
T d1nr0a2 8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI--------SNRVFPDVHATMITGIKTTSK-G-DLFTVSWDDH 77 (299)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------EEECSSCSCSSCEEEEEECTT-S-CEEEEETTTE
T ss_pred cCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCc--------EEEEEcCCCCCcEEEEEeecc-c-eeecccceee
Confidence 45789999999999999999999999999999998762 22222 24567999999995 4 4667778999
Q ss_pred EEEEeCCC
Q 002843 853 VKVCMSCR 860 (874)
Q Consensus 853 V~~WD~~~ 860 (874)
|++||+..
T Consensus 78 v~~~~~~~ 85 (299)
T d1nr0a2 78 LKVVPAGG 85 (299)
T ss_dssp EEEECSSS
T ss_pred EEEeccCC
Confidence 99999874
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.06 E-value=1.8e-10 Score=123.82 Aligned_cols=95 Identities=13% Similarity=0.247 Sum_probs=73.7
Q ss_pred ccceeeee--ceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCce
Q 002843 755 LCKYARYS--KFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKL 831 (874)
Q Consensus 755 l~~~~ry~--~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v 831 (874)
..+++... ++..+.+|+ +|.+.|++|+|+|++++|||||.|++|+|||+.+.. . .+...+ .+...|
T Consensus 30 ~i~iw~~~~~~~~~~~~l~-----gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~-----~-~~~~~~~~~~~~v 98 (371)
T d1k8kc_ 30 EVHIYEKSGNKWVQVHELK-----EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT-----W-KPTLVILRINRAA 98 (371)
T ss_dssp EEEEEEEETTEEEEEEEEE-----CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE-----E-EEEEECCCCSSCE
T ss_pred EEEEEECCCCCEEEEEEec-----CCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccc-----c-ccccccccccccc
Confidence 34455553 445666665 459999999999999999999999999999998651 1 122222 356789
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEeCCCc
Q 002843 832 SCVCWNNYIKNYLASADYDGVVKVCMSCRL 861 (874)
Q Consensus 832 ~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~ 861 (874)
.|++|+| +.+.||+|+.|++|++|++...
T Consensus 99 ~~i~~~p-~~~~l~~~s~d~~i~i~~~~~~ 127 (371)
T d1k8kc_ 99 RCVRWAP-NEKKFAVGSGSRVISICYFEQE 127 (371)
T ss_dssp EEEEECT-TSSEEEEEETTSSEEEEEEETT
T ss_pred ccccccc-ccccceeecccCcceeeeeecc
Confidence 9999999 4789999999999999998754
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.05 E-value=2.7e-10 Score=120.31 Aligned_cols=91 Identities=7% Similarity=0.054 Sum_probs=71.5
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeC--CCc
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADY--DGV 852 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~--Dg~ 852 (874)
.+|++.|.+++|+|||++|||||.|++|+|||+.+.. +.....+. +.+.|.+|+|+|. +.+||+++. |+.
T Consensus 55 ~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~------~~~~~~~~~~~~~v~~v~~s~d-~~~l~~~~~~~~~~ 127 (311)
T d1nr0a1 55 TEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT------HILKTTIPVFSGPVKDISWDSE-SKRIAAVGEGRERF 127 (311)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT------CCEEEEEECSSSCEEEEEECTT-SCEEEEEECCSSCS
T ss_pred cCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccc------cccccccccccCcccccccccc-cccccccccccccc
Confidence 5679999999999999999999999999999998752 11122333 5678999999994 778888875 567
Q ss_pred EEEEeCCCccc---eeeeeeeeee
Q 002843 853 VKVCMSCRLST---YCFRKKFVFT 873 (874)
Q Consensus 853 V~~WD~~~~~~---~~~~~~f~~~ 873 (874)
++|||+.+++. +.+|...|.+
T Consensus 128 ~~v~~~~~~~~~~~l~~h~~~v~~ 151 (311)
T d1nr0a1 128 GHVFLFDTGTSNGNLTGQARAMNS 151 (311)
T ss_dssp EEEEETTTCCBCBCCCCCSSCEEE
T ss_pred cccccccccccccccccccccccc
Confidence 99999987543 6666666654
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.03 E-value=2.6e-10 Score=115.32 Aligned_cols=79 Identities=11% Similarity=0.161 Sum_probs=68.3
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcE
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVV 853 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V 853 (874)
|.||.+.|.+|+|+|++++|||||.|++|+|||+.++ ..+..+. |.+.|.+++|+| +..++++++.++++
T Consensus 13 L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~--------~~~~~~~~h~~~V~~~~~~~-~~~~~~~~~~~~~~ 83 (317)
T d1vyhc1 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG--------DFERTLKGHTDSVQDISFDH-SGKLLASCSADMTI 83 (317)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC--------CCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCC
T ss_pred EcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC--------CEEEEEeCCCCcEEEEeeec-cccccccccccccc
Confidence 4567999999999999999999999999999999876 2344444 567899999999 58899999999999
Q ss_pred EEEeCCCcc
Q 002843 854 KVCMSCRLS 862 (874)
Q Consensus 854 ~~WD~~~~~ 862 (874)
.+||....+
T Consensus 84 ~~~~~~~~~ 92 (317)
T d1vyhc1 84 KLWDFQGFE 92 (317)
T ss_dssp CEEETTSSC
T ss_pred ccccccccc
Confidence 999998653
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.03 E-value=2.8e-10 Score=117.35 Aligned_cols=75 Identities=15% Similarity=0.195 Sum_probs=61.0
Q ss_pred CCCC-CeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 777 NSAN-VICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 777 ~~~~-~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
||.+ +|.|++| ||++|||||.|++|+|||+.++ .++.++. |.+.|.+|+|+| .++||||+.||+|+
T Consensus 10 GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~--------~~~~~l~~H~~~V~~l~~s~--~~~l~s~s~D~~i~ 77 (355)
T d1nexb2 10 GHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK--------KFLLQLSGHDGGVWALKYAH--GGILVSGSTDRTVR 77 (355)
T ss_dssp CCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTT--------EEEEEEECCSSCEEEEEEET--TTEEEEEETTCCEE
T ss_pred CcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCC--------cEEEEEECCCCCEEEEEEcC--CCEEEEEecccccc
Confidence 4555 4577777 5789999999999999999876 3455555 567899999998 45899999999999
Q ss_pred EEeCCCccc
Q 002843 855 VCMSCRLST 863 (874)
Q Consensus 855 ~WD~~~~~~ 863 (874)
+||+...+.
T Consensus 78 iw~~~~~~~ 86 (355)
T d1nexb2 78 VWDIKKGCC 86 (355)
T ss_dssp EEETTTTEE
T ss_pred ccccccccc
Confidence 999987543
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.02 E-value=1.8e-10 Score=123.97 Aligned_cols=76 Identities=14% Similarity=0.209 Sum_probs=63.8
Q ss_pred CCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEEEEe
Q 002843 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKVCM 857 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD 857 (874)
-.+|.|++|+|||++||+|+.|+.|+|||+.+.. -..+..+. |.+.|.+|+|+| ++++||||+.|++|+|||
T Consensus 7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~------~~~~~~l~gH~~~V~~l~fsp-~~~~l~s~s~D~~i~vWd 79 (371)
T d1k8kc_ 7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK------WVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWT 79 (371)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE------EEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCC------EEEEEEecCCCCCEEEEEECC-CCCEEEEEECCCeEEEEe
Confidence 3789999999999999999999999999987641 01233444 567899999999 578999999999999999
Q ss_pred CCCc
Q 002843 858 SCRL 861 (874)
Q Consensus 858 ~~~~ 861 (874)
+..+
T Consensus 80 ~~~~ 83 (371)
T d1k8kc_ 80 LKGR 83 (371)
T ss_dssp EETT
T ss_pred eccc
Confidence 9764
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=4.6e-10 Score=112.34 Aligned_cols=75 Identities=13% Similarity=0.265 Sum_probs=62.4
Q ss_pred CCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 776 ~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
..|+..|.|++| ||++|||||.|++|||||+.++ .++..+. |.+.|.||+|++ ++||||+.||+|+
T Consensus 12 ~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~--------~~~~~l~~H~~~V~~v~~~~---~~l~s~s~D~~i~ 78 (293)
T d1p22a2 12 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL--------ECKRILTGHTGSVLCLQYDE---RVIITGSSDSTVR 78 (293)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC--------CEEEEECCCSSCEEEEECCS---SEEEEEETTSCEE
T ss_pred CCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCC--------cEEEEEecCCCCEeeeeccc---ceeeccccccccc
Confidence 356888998776 7999999999999999999876 3455555 567899999964 5999999999999
Q ss_pred EEeCCCccc
Q 002843 855 VCMSCRLST 863 (874)
Q Consensus 855 ~WD~~~~~~ 863 (874)
+||+..+..
T Consensus 79 ~~~~~~~~~ 87 (293)
T d1p22a2 79 VWDVNTGEM 87 (293)
T ss_dssp EEESSSCCE
T ss_pred ccccccccc
Confidence 999987644
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.01 E-value=2.6e-10 Score=123.54 Aligned_cols=85 Identities=13% Similarity=0.063 Sum_probs=64.6
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCCCEEEEeeCCCc-
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIKNYLASADYDGV- 852 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~~~laS~~~Dg~- 852 (874)
...+...|.+++|+||| +|||||.|++|+|||+.++... ... .+...+ .|...|.||+|+| ++.+||||+.|++
T Consensus 180 ~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~-~~~-~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~D~t~ 255 (393)
T d1sq9a_ 180 PMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPL-YNF-ESQHSMINNSNSIRSVKFSP-QGSLLAIAHDSNSF 255 (393)
T ss_dssp SSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEE-EEE-ECCC---CCCCCEEEEEECS-STTEEEEEEEETTE
T ss_pred ccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccc-ccc-ccccccccccceEEEccccc-ccceeeeecCCCCc
Confidence 34457789999999998 9999999999999999975210 000 111122 3567899999999 5889999999975
Q ss_pred --EEEEeCCCccc
Q 002843 853 --VKVCMSCRLST 863 (874)
Q Consensus 853 --V~~WD~~~~~~ 863 (874)
|+|||+.+++.
T Consensus 256 ~~i~lwd~~~g~~ 268 (393)
T d1sq9a_ 256 GCITLYETEFGER 268 (393)
T ss_dssp EEEEEEETTTCCE
T ss_pred ceeeeccccccee
Confidence 99999987643
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.01 E-value=4.7e-10 Score=115.27 Aligned_cols=78 Identities=17% Similarity=0.297 Sum_probs=62.3
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cC-CCceeEEEEeCCCCCEEEEeeCCC
Q 002843 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SN-RSKLSCVCWNNYIKNYLASADYDG 851 (874)
Q Consensus 774 ~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~-~~~v~~l~wnp~~~~~laS~~~Dg 851 (874)
.+.+|.+.|.+|+|+|+|.+|||||.|++|+|||+.+... .++... .+ ...|.+++|.+ +.+|+||+.||
T Consensus 219 ~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~------~~~~~~~~~~~~~v~~~~~~~--~~~l~s~s~D~ 290 (299)
T d1nr0a2 219 SWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD------HPIIIKGAHAMSSVNSVIWLN--ETTIVSAGQDS 290 (299)
T ss_dssp CCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTS------CCEEETTSSTTSCEEEEEEEE--TTEEEEEETTS
T ss_pred cccccccccccccccccccceEEEcCCCEEEEEECCCCCc------ceEEEecCCCCCcEEEEEECC--CCEEEEEeCCC
Confidence 3556799999999999999999999999999999987521 122222 22 34688888875 56999999999
Q ss_pred cEEEEeCC
Q 002843 852 VVKVCMSC 859 (874)
Q Consensus 852 ~V~~WD~~ 859 (874)
+|+|||+.
T Consensus 291 ~i~iWdl~ 298 (299)
T d1nr0a2 291 NIKFWNVP 298 (299)
T ss_dssp CEEEEECC
T ss_pred EEEEEecc
Confidence 99999984
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.99 E-value=3.2e-10 Score=116.21 Aligned_cols=85 Identities=7% Similarity=0.053 Sum_probs=65.8
Q ss_pred eceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCC
Q 002843 762 SKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYI 840 (874)
Q Consensus 762 ~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~ 840 (874)
.+++....|+ ||.+.|.+ +|++||++|||||.|++|||||+.++ .++..+. |...|.+++|+|.
T Consensus 4 ~~~~~~~~l~-----GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~--------~~~~~~~~h~~~V~~v~~~~~- 68 (342)
T d2ovrb2 4 GELKSPKVLK-----GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTG--------KCLRTLVGHTGGVWSSQMRDN- 68 (342)
T ss_dssp SCCCCCEEEE-----CSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTC--------CEEEECCCCSSCEEEEEEETT-
T ss_pred CCCCcCEEEC-----CcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCC--------CEEEEEeCCCCCEEEEEeCCC-
Confidence 4455555665 35776644 35567999999999999999999876 3455554 5578999999973
Q ss_pred CCEEEEeeCCCcEEEEeCCCccc
Q 002843 841 KNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 841 ~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
+|+||+.|+++++|+......
T Consensus 69 --~l~s~s~D~~~~~~~~~~~~~ 89 (342)
T d2ovrb2 69 --IIISGSTDRTLKVWNAETGEC 89 (342)
T ss_dssp --EEEEEETTSCEEEEETTTTEE
T ss_pred --ccccceecccccccccccccc
Confidence 999999999999999986533
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.92 E-value=2.1e-09 Score=109.71 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=60.8
Q ss_pred CCCCCCCeeEEEECCC----------CCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeEEEEeCCCCCE
Q 002843 775 FNNSANVICSISFDRD----------EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSCVCWNNYIKNY 843 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d----------~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~l~wnp~~~~~ 843 (874)
+.+|...|.+|+|+|+ +.+|||||.|++|+|||+.+.. ..+..+ .|.+.|++|+|+|. ..
T Consensus 201 ~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~-------~~~~~~~~h~~~V~~v~~~~~--~~ 271 (287)
T d1pgua2 201 WAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM-------KIIKALNAHKDGVNNLLWETP--ST 271 (287)
T ss_dssp SCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT-------CCEEETTSSTTCEEEEEEEET--TE
T ss_pred ccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCC-------eEEEEeCCCCCCeEEEEECCC--CE
Confidence 3467899999999875 5689999999999999987641 223333 36688999999984 47
Q ss_pred EEEeeCCCcEEEEeC
Q 002843 844 LASADYDGVVKVCMS 858 (874)
Q Consensus 844 laS~~~Dg~V~~WD~ 858 (874)
|+|++.||+|+|||+
T Consensus 272 l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 272 LVSSGADACIKRWNV 286 (287)
T ss_dssp EEEEETTSCEEEEEE
T ss_pred EEEEECCCeEEEEEE
Confidence 999999999999996
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.90 E-value=2.6e-09 Score=112.70 Aligned_cols=96 Identities=13% Similarity=0.198 Sum_probs=68.8
Q ss_pred cceeeeeceeEeEEecccCCCCCCCCeeEEEECCC-CCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCce--
Q 002843 756 CKYARYSKFEVQGMLRTGEFNNSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKL-- 831 (874)
Q Consensus 756 ~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d-~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v-- 831 (874)
.+++....++...++. .+..|...|.+|+|+|| +.+||||+.|++|+|||+++. ..+..+. |...|
T Consensus 184 v~~~d~~~~~~~~~~~--~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~--------~~~~~l~~~~~~v~~ 253 (325)
T d1pgua1 184 VVFYQGPPFKFSASDR--THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG--------EFLKYIEDDQEPVQG 253 (325)
T ss_dssp EEEEETTTBEEEEEEC--SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC--------CEEEECCBTTBCCCS
T ss_pred cccccccccccceecc--cccCCCCccEEeeeccccceeccccccccceeeeeeccc--------ccccccccccccccc
Confidence 3444444455554443 23567899999999997 578999999999999999876 2233333 23344
Q ss_pred --eEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 832 --SCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 832 --~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
.+++|. ++.+|||++.||+|+|||+.+++.
T Consensus 254 ~~~s~~~~--dg~~l~s~s~D~~i~iwd~~~~~~ 285 (325)
T d1pgua1 254 GIFALSWL--DSQKFATVGADATIRVWDVTTSKC 285 (325)
T ss_dssp CEEEEEES--SSSEEEEEETTSEEEEEETTTTEE
T ss_pred ceeeeecc--CCCEEEEEeCCCeEEEEECCCCCE
Confidence 455554 467999999999999999998754
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.85 E-value=3.9e-09 Score=111.30 Aligned_cols=98 Identities=6% Similarity=-0.011 Sum_probs=73.9
Q ss_pred cceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCCCCcccccCeeee-cCCCceeE
Q 002843 756 CKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM-SNRSKLSC 833 (874)
Q Consensus 756 ~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~-~~~~~v~~ 833 (874)
..+..+.+.+.+.+++ +|...|.+++|+|++.+ ++|||.|+.|++||+.+... ....... .+...|.|
T Consensus 141 ~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~-----~~~~~~~~~~~~~v~~ 210 (325)
T d1pgua1 141 GVFISWDSGNSLGEVS-----GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF-----SASDRTHHKQGSFVRD 210 (325)
T ss_dssp EEEEETTTCCEEEECC-----SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEE-----EEEECSSSCTTCCEEE
T ss_pred EEEEeecccccceeee-----ecccccccccccccccceEEEeeccccccccccccccc-----ceecccccCCCCccEE
Confidence 3444455555555554 46999999999999986 78999999999999886511 1111111 23456999
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 834 VCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 834 l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
|+|+|....+||+|+.||.|+|||+.+++.
T Consensus 211 v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~ 240 (325)
T d1pgua1 211 VEFSPDSGEFVITVGSDRKISCFDGKSGEF 240 (325)
T ss_dssp EEECSTTCCEEEEEETTCCEEEEETTTCCE
T ss_pred eeeccccceeccccccccceeeeeeccccc
Confidence 999998788999999999999999987754
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.76 E-value=4.7e-09 Score=106.79 Aligned_cols=79 Identities=19% Similarity=0.111 Sum_probs=64.9
Q ss_pred cCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCc
Q 002843 773 GEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (874)
Q Consensus 773 ~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~ 852 (874)
....+|...|++|+|+|++.+|||||.|++|+|||+.+. ..+.++.....+++++|+| ++++||+|+.|++
T Consensus 245 ~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~--------~~l~~~~~~~~~~~~~~s~-~~~~l~~a~sdd~ 315 (342)
T d1yfqa_ 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR--------KKIKNFAKFNEDSVVKIAC-SDNILCLATSDDT 315 (342)
T ss_dssp TTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT--------EEEEECCCCSSSEEEEEEE-CSSEEEEEEECTH
T ss_pred cCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCC--------cEEEEecCCCCCEEEEEEe-CCCEEEEEEcCCc
Confidence 345567889999999999999999999999999999975 3344555556677788888 4779999999999
Q ss_pred EEEEeCCC
Q 002843 853 VKVCMSCR 860 (874)
Q Consensus 853 V~~WD~~~ 860 (874)
+++|....
T Consensus 316 ~~~~~~~~ 323 (342)
T d1yfqa_ 316 FKTNAAID 323 (342)
T ss_dssp HHHCSSSC
T ss_pred EEEeeeeC
Confidence 99998753
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.71 E-value=2.3e-08 Score=101.94 Aligned_cols=93 Identities=11% Similarity=0.066 Sum_probs=69.7
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee------cC
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM------SN 827 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~------~~ 827 (874)
+..+++.....+....+.. ...|...+.+++|++ .+|||||.|++|+|||++++. .+.++ .+
T Consensus 237 ~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~s~s~Dg~i~iwd~~tg~--------~i~~~~~~~~~~~ 304 (342)
T d2ovrb2 237 STVKIWDIKTGQCLQTLQG--PNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGE--------FIRNLVTLESGGS 304 (342)
T ss_dssp SCEEEEETTTCCEEEEECS--TTSCSSCEEEEEECS--SEEEEEETTSEEEEEETTTCC--------EEEEEEECTTGGG
T ss_pred CEEEEEecccccccccccc--cceeeeceeecccCC--CeeEEEcCCCEEEEEECCCCC--------EEEEEecccCCCC
Confidence 3345555556666666652 235678888888865 699999999999999999861 12221 24
Q ss_pred CCceeEEEEeCCCCCEEEEeeCCCc----EEEEeCC
Q 002843 828 RSKLSCVCWNNYIKNYLASADYDGV----VKVCMSC 859 (874)
Q Consensus 828 ~~~v~~l~wnp~~~~~laS~~~Dg~----V~~WD~~ 859 (874)
.+.|.+|+|+| ++.+||+|+.||+ |++||+.
T Consensus 305 ~~~v~~v~~s~-~~~~la~g~~dGt~~~~l~~~Df~ 339 (342)
T d2ovrb2 305 GGVVWRIRASN-TKLVCAVGSRNGTEETKLLVLDFD 339 (342)
T ss_dssp TCEEEEEEECS-SEEEEEEECSSSSSCCEEEEEECC
T ss_pred CCCEEEEEECC-CCCEEEEEeCCCCCeeEEEEEeCC
Confidence 56799999999 5889999999997 9999986
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.65 E-value=5.4e-08 Score=99.72 Aligned_cols=99 Identities=13% Similarity=0.229 Sum_probs=75.4
Q ss_pred ceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEE
Q 002843 757 KYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVC 835 (874)
Q Consensus 757 ~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~ 835 (874)
+++...+.+.+.+.. ++...+.++.|+|++.++++|+.|++|+|||+.+. .++..+. |.+.|.+++
T Consensus 184 ~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~--------~~~~~~~~h~~~v~~~~ 250 (355)
T d1nexb2 184 IVWDVAQMKCLYILS-----GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG--------ELMYTLQGHTALVGLLR 250 (355)
T ss_dssp EEEETTTTEEEEEEC-----CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTC--------CEEEEECCCSSCCCEEE
T ss_pred eeeecccccceeeee-----ccccccccccccccceeeecccccceEEeeecccc--------ccccccccccccccccc
Confidence 444444555555554 23678899999999999999999999999999976 2334444 557899999
Q ss_pred EeCCCCCEEEEeeCCCcEEEEeCCCccc-eeeeeeee
Q 002843 836 WNNYIKNYLASADYDGVVKVCMSCRLST-YCFRKKFV 871 (874)
Q Consensus 836 wnp~~~~~laS~~~Dg~V~~WD~~~~~~-~~~~~~f~ 871 (874)
|++ ++||+|+.||+|++||+.+... +..+..-+
T Consensus 251 ~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 284 (355)
T d1nexb2 251 LSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNL 284 (355)
T ss_dssp ECS---SEEEEECTTSEEEEEETTTCCEEEEEECTTC
T ss_pred ccc---ceeeeeecccccccccccccceecccccCCc
Confidence 986 4899999999999999997644 55554433
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.63 E-value=3.7e-08 Score=102.35 Aligned_cols=78 Identities=8% Similarity=-0.063 Sum_probs=64.6
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCC--cEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSK--KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk--~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~ 854 (874)
.|.+.|.+++|+|||++||++|.+. .|+|||+.++. ......+...|.+++|+| ++.+||+++.|+.+.
T Consensus 40 ~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~--------~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~ 110 (360)
T d1k32a3 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK--------AEKFEENLGNVFAMGVDR-NGKFAVVANDRFEIM 110 (360)
T ss_dssp SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC--------EEECCCCCCSEEEEEECT-TSSEEEEEETTSEEE
T ss_pred cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCc--------EEEeeCCCceEEeeeecc-cccccceeccccccc
Confidence 4578899999999999999887664 89999999762 222234567899999999 578999999999999
Q ss_pred EEeCCCccc
Q 002843 855 VCMSCRLST 863 (874)
Q Consensus 855 ~WD~~~~~~ 863 (874)
+||+.+++.
T Consensus 111 ~~~~~~~~~ 119 (360)
T d1k32a3 111 TVDLETGKP 119 (360)
T ss_dssp EEETTTCCE
T ss_pred cccccccce
Confidence 999997654
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.59 E-value=3.1e-08 Score=98.59 Aligned_cols=94 Identities=9% Similarity=0.096 Sum_probs=66.3
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCC-CcccccCeeeec-CCCce
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFND-SVDVYYPAVEMS-NRSKL 831 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~-~~~~~~p~~~~~-~~~~v 831 (874)
+..+++.+...+.+.... ++...|.+ +++++.+||||+.|++|+|||+.+.... ......++..+. |.+.|
T Consensus 198 g~i~i~d~~~~~~~~~~~-----~~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V 270 (293)
T d1p22a2 198 NTIRLWDIECGACLRVLE-----GHEELVRC--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 270 (293)
T ss_dssp SCEEEEETTTCCEEEEEC-----CCSSCEEE--EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCC
T ss_pred CEEEEEecccceeeeeec-----ccceeeee--ccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCE
Confidence 334555555556665554 34666765 5667899999999999999998864221 112223444554 56789
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEe
Q 002843 832 SCVCWNNYIKNYLASADYDGVVKVCM 857 (874)
Q Consensus 832 ~~l~wnp~~~~~laS~~~Dg~V~~WD 857 (874)
.+|+|++ ++||||+.||+|+|||
T Consensus 271 ~~v~~d~---~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 271 FRLQFDE---FQIVSSSHDDTILIWD 293 (293)
T ss_dssp CCEEECS---SCEEECCSSSEEEEEC
T ss_pred EEEEEcC---CEEEEEecCCEEEEeC
Confidence 9999975 4799999999999998
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.54 E-value=6e-08 Score=106.11 Aligned_cols=98 Identities=13% Similarity=0.067 Sum_probs=72.7
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec----CCC
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS----NRS 829 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~----~~~ 829 (874)
+..+++--.+.+++++|..| ..|.+|+|||||++||++|.|++|+|||+.+... ..+.++. +..
T Consensus 42 g~v~vwD~~t~~~~~~l~~g------~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~------~~~~~i~~~~~~~~ 109 (426)
T d1hzua2 42 GQIALVDGDSKKIVKVIDTG------YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEP------TKVAEIKIGIEARS 109 (426)
T ss_dssp TEEEEEETTTCSEEEEEECC------SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSC------EEEEEEECCSEEEE
T ss_pred CEEEEEECCCCcEEEEEeCC------CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCce------eEEEEEeCCCCCcc
Confidence 45577777888999999863 4589999999999999999999999999998621 1112222 223
Q ss_pred ceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 830 KLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 830 ~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
-+.+++|+|+.+.+++++..|++|++||..++..
T Consensus 110 ~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~ 143 (426)
T d1hzua2 110 VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP 143 (426)
T ss_dssp EEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE
T ss_pred eEEeeeecCCCCEEEEeecCCCeEEEEcCCccce
Confidence 3567788885443445666799999999998644
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=98.48 E-value=2.8e-07 Score=101.71 Aligned_cols=98 Identities=14% Similarity=0.058 Sum_probs=72.3
Q ss_pred hccceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCC----C
Q 002843 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR----S 829 (874)
Q Consensus 754 ~l~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~----~ 829 (874)
+-..++--.+.++++++..| ..|.+|+|||||++||+++.|++|+|||+.+... ..+.++... +
T Consensus 42 g~v~v~D~~t~~v~~~~~~g------~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~------~~~~~i~~~~~~~~ 109 (432)
T d1qksa2 42 GQIALIDGSTYEIKTVLDTG------YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP------TTVAEIKIGSEARS 109 (432)
T ss_dssp TEEEEEETTTCCEEEEEECS------SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC------CEEEEEECCSEEEE
T ss_pred CEEEEEECCCCcEEEEEeCC------CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCc------eEEEEEecCCCCCC
Confidence 34567777888999999862 3599999999999999999999999999998621 112233322 2
Q ss_pred ceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 830 KLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 830 ~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
-+.+.+|+|+.+.++|+++.|++|+|||+.+++.
T Consensus 110 ~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~ 143 (432)
T d1qksa2 110 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP 143 (432)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE
T ss_pred eEEecccCCCCCEEEEEcCCCCeEEEEeCccccc
Confidence 3455566775444558888899999999998754
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.42 E-value=8.6e-08 Score=104.83 Aligned_cols=91 Identities=15% Similarity=0.134 Sum_probs=64.7
Q ss_pred eEeEEecccCCCCCCCCeeEEEECCCCCEEE-------EecCCCcEEEeeCCCCCCCCcccccCeee----ecCCCceeE
Q 002843 765 EVQGMLRTGEFNNSANVICSISFDRDEDHFA-------AAGVSKKIKIFEFNALFNDSVDVYYPAVE----MSNRSKLSC 833 (874)
Q Consensus 765 ~~~~~l~~~~~~~~~~~V~si~F~~d~~~lA-------T~g~dk~Ikiwd~~~~~~~~~~~~~p~~~----~~~~~~v~~ 833 (874)
+...+|. +|+..|.+|+|+|||.+|| +|+.|++|+|||++++..... . .|..+ -.+...|.+
T Consensus 294 ~~~~~l~-----g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~-~-~~~~~~~~~~~~~~rv~~ 366 (426)
T d1hzua2 294 KKVAELQ-----GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQ-V-LPIAEWADLGEGAKRVVQ 366 (426)
T ss_dssp SEEEEEE-----CSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCE-E-ECHHHHHCCCSSCCCEEE
T ss_pred eEeEEEe-----cCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeE-E-eccchhcccCCCCccEEE
Confidence 4455554 4588999999999999999 577899999999998621100 0 01111 123456889
Q ss_pred EEEeCCCCCEEEEe----eCCCcEEEEeCCCcc
Q 002843 834 VCWNNYIKNYLASA----DYDGVVKVCMSCRLS 862 (874)
Q Consensus 834 l~wnp~~~~~laS~----~~Dg~V~~WD~~~~~ 862 (874)
++|||+.+.+++|+ +.||+|+|||..+++
T Consensus 367 ~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k 399 (426)
T d1hzua2 367 PEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 399 (426)
T ss_dssp EEECSSSSEEEEEECCCTTSCCEEEEEETTTTE
T ss_pred EEECCCCCEEEEEEecCCCCCCeEEEEECCCCe
Confidence 99999766565664 468999999999875
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=98.21 E-value=2.6e-06 Score=85.68 Aligned_cols=94 Identities=11% Similarity=0.022 Sum_probs=74.4
Q ss_pred cceeeeeceeEeEEecccCCCCCCCCeeEEEECCCCCEE-EEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEE
Q 002843 756 CKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHF-AAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCV 834 (874)
Q Consensus 756 ~~~~ry~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~l-AT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l 834 (874)
.+.+-..+.+++++++.| ..+.+|+|+|||++| ++++.+++|++||+.+. ..+..+..+.....+
T Consensus 14 v~v~D~~t~~~~~~i~~g------~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~--------~~~~~~~~~~~~~~~ 79 (301)
T d1l0qa2 14 ISVIDVTSNKVTATIPVG------SNPMGAVISPDGTKVYVANAHSNDVSIIDTATN--------NVIATVPAGSSPQGV 79 (301)
T ss_dssp EEEEETTTTEEEEEEECS------SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--------EEEEEEECSSSEEEE
T ss_pred EEEEECCCCeEEEEEECC------CCceEEEEeCCCCEEEEEECCCCEEEEEECCCC--------ceeeeeecccccccc
Confidence 345566778899998863 346899999999985 78889999999999986 344555556678899
Q ss_pred EEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 835 CWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 835 ~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
+|++.....++++..++.+.+||..+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (301)
T d1l0qa2 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTV 108 (301)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred ccccccccccccccccceeeeccccccee
Confidence 99997666777788899999999987643
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=98.18 E-value=8.3e-07 Score=91.03 Aligned_cols=71 Identities=1% Similarity=-0.094 Sum_probs=57.3
Q ss_pred EEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeee--cCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 785 ISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM--SNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 785 i~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~--~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
+||+++|+|||+++.|++|.|||+++. ..+.++ .+...+.+|+|+|+.+.++++++.|+.|.+||+.+++
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~--------~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~ 73 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASD--------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 73 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTT--------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCC--------CEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCe
Confidence 589999999999999999999999986 333333 3445688999999655455788889999999999764
Q ss_pred c
Q 002843 863 T 863 (874)
Q Consensus 863 ~ 863 (874)
.
T Consensus 74 ~ 74 (346)
T d1jmxb_ 74 N 74 (346)
T ss_dssp E
T ss_pred e
Confidence 3
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.08 E-value=3e-06 Score=87.37 Aligned_cols=80 Identities=11% Similarity=0.100 Sum_probs=62.8
Q ss_pred CCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec-CCCceeEEEEeCCCCCEEEEee-----
Q 002843 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS-NRSKLSCVCWNNYIKNYLASAD----- 848 (874)
Q Consensus 775 ~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~-~~~~v~~l~wnp~~~~~laS~~----- 848 (874)
+.+|...|.+++|+|||++||+++.++.|++||+.+.. ....+. +...+.+++|+|+ +.+||.++
T Consensus 81 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~spd-g~~la~~~~~~~~ 151 (360)
T d1k32a3 81 FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK--------PTVIERSREAMITDFTISDN-SRFIAYGFPLKHG 151 (360)
T ss_dssp CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------EEEEEECSSSCCCCEEECTT-SCEEEEEEEECSS
T ss_pred eeCCCceEEeeeecccccccceeccccccccccccccc--------eeeeeecccccccchhhccc-eeeeeeecccccc
Confidence 44568999999999999999999999999999998762 222233 4457889999994 77888543
Q ss_pred -----CCCcEEEEeCCCccc
Q 002843 849 -----YDGVVKVCMSCRLST 863 (874)
Q Consensus 849 -----~Dg~V~~WD~~~~~~ 863 (874)
.++.+.+||+.+++.
T Consensus 152 ~~~~~~~~~~~v~d~~~~~~ 171 (360)
T d1k32a3 152 ETDGYVMQAIHVYDMEGRKI 171 (360)
T ss_dssp TTCSCCEEEEEEEETTTTEE
T ss_pred ceeeccccceeeeccccCce
Confidence 455799999997644
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=98.07 E-value=6.9e-06 Score=82.46 Aligned_cols=77 Identities=5% Similarity=0.006 Sum_probs=58.8
Q ss_pred CCCeeEEEECCCCCEEEEec---CCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEE
Q 002843 779 ANVICSISFDRDEDHFAAAG---VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKV 855 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g---~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~ 855 (874)
...+.+++|+++|.+++.++ .+++|++||..+. ..+..+.....+.+|+|+|+.+.++++++.|++|+|
T Consensus 199 ~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~--------~~~~~~~~~~~~~~va~spdg~~l~va~~~~~~i~v 270 (301)
T d1l0qa2 199 EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN--------KITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSV 270 (301)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT--------EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred cCCcceeeccccccccccccccceeeeeeeeecCCC--------eEEEEEcCCCCEEEEEEeCCCCEEEEEECCCCeEEE
Confidence 45577899999999866554 3468999999876 223344556678999999964444578889999999
Q ss_pred EeCCCccc
Q 002843 856 CMSCRLST 863 (874)
Q Consensus 856 WD~~~~~~ 863 (874)
||+.+++.
T Consensus 271 ~D~~t~~~ 278 (301)
T d1l0qa2 271 IDTATNTI 278 (301)
T ss_dssp EETTTTEE
T ss_pred EECCCCeE
Confidence 99998754
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.04 E-value=4.4e-06 Score=85.07 Aligned_cols=76 Identities=8% Similarity=-0.060 Sum_probs=63.1
Q ss_pred CCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEE
Q 002843 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVC 856 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~W 856 (874)
++...+.+++++|++.+++++ +++|++||+.+. ..+..+.+...+.+++|+| ++.+|++|+.||+|.||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~--------~~~~~~~~~~~~~~~~~s~-dG~~l~v~~~~~~i~v~ 306 (337)
T d1pbyb_ 238 IMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN--------ASIKRVPLPHSYYSVNVST-DGSTVWLGGALGDLAAY 306 (337)
T ss_dssp ECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT--------EEEEEEECSSCCCEEEECT-TSCEEEEESBSSEEEEE
T ss_pred CCCcceEEEEecccceEEEEc--cccEEEEECCCC--------cEEEEEcCCCCEEEEEECC-CCCEEEEEeCCCcEEEE
Confidence 457888999999999998876 589999999986 2334445566789999999 57799999999999999
Q ss_pred eCCCccc
Q 002843 857 MSCRLST 863 (874)
Q Consensus 857 D~~~~~~ 863 (874)
|+.+++.
T Consensus 307 D~~t~~~ 313 (337)
T d1pbyb_ 307 DAETLEK 313 (337)
T ss_dssp ETTTCCE
T ss_pred ECCCCcE
Confidence 9998654
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=97.99 E-value=1.4e-05 Score=81.69 Aligned_cols=87 Identities=9% Similarity=0.078 Sum_probs=62.0
Q ss_pred eeEeEEecccCCCCCCCCeeEEEECCCCCEE-EEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCC
Q 002843 764 FEVQGMLRTGEFNNSANVICSISFDRDEDHF-AAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKN 842 (874)
Q Consensus 764 ~~~~~~l~~~~~~~~~~~V~si~F~~d~~~l-AT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~ 842 (874)
++.+.++.+ .+.|.+|+|+|||++| ++++.|++|++|++....... ...........+.+|+|+|+ +.
T Consensus 27 l~~~~~~~~------~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~----~~~~~~~~~~~p~~l~~spD-g~ 95 (333)
T d1ri6a_ 27 LTLTQVVDV------PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL----TFAAESALPGSLTHISTDHQ-GQ 95 (333)
T ss_dssp EEEEEEEEC------SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE----EEEEEEECSSCCSEEEECTT-SS
T ss_pred eEEEEEEcC------CCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcE----EEeeecccCCCceEEEEcCC-CC
Confidence 455555555 6789999999999986 667779999999998641110 11112233456788999995 77
Q ss_pred EEEEeeC-CCcEEEEeCCCc
Q 002843 843 YLASADY-DGVVKVCMSCRL 861 (874)
Q Consensus 843 ~laS~~~-Dg~V~~WD~~~~ 861 (874)
+|+++++ +++|.+|+....
T Consensus 96 ~l~v~~~~~~~v~~~~~~~~ 115 (333)
T d1ri6a_ 96 FVFVGSYNAGNVSVTRLEDG 115 (333)
T ss_dssp EEEEEETTTTEEEEEEEETT
T ss_pred EEeecccCCCceeeeccccc
Confidence 8888887 679999998754
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=97.96 E-value=6.3e-06 Score=84.24 Aligned_cols=76 Identities=7% Similarity=-0.008 Sum_probs=62.5
Q ss_pred CCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEe
Q 002843 778 SANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCM 857 (874)
Q Consensus 778 ~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD 857 (874)
+...+.++.+++++.++|+++ +..|++||..+. ..+..+.+...+.+|+|+| ++.+|++++.||.|+|||
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~--------~~~~~~~~~~~~~~va~s~-DG~~l~v~~~d~~v~v~D 319 (346)
T d1jmxb_ 250 LTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQR--------KLIKAANLDHTYYCVAFDK-KGDKLYLGGTFNDLAVFN 319 (346)
T ss_dssp CSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTT--------EEEEEEECSSCCCEEEECS-SSSCEEEESBSSEEEEEE
T ss_pred ccceeEEEEEeCCCCEEEEec-CCeEEEEECCCC--------cEEEEEcCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEE
Confidence 477888999999999998877 457999999876 3344445556789999999 477999999999999999
Q ss_pred CCCccc
Q 002843 858 SCRLST 863 (874)
Q Consensus 858 ~~~~~~ 863 (874)
+.+++.
T Consensus 320 ~~t~~~ 325 (346)
T d1jmxb_ 320 PDTLEK 325 (346)
T ss_dssp TTTTEE
T ss_pred CccCCE
Confidence 998754
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.65 E-value=2.7e-05 Score=79.03 Aligned_cols=64 Identities=8% Similarity=-0.068 Sum_probs=48.7
Q ss_pred CEEEEecCCCcEEEeeCCCCCCCCcccccCeeeec--C-CCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCccc
Q 002843 792 DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS--N-RSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 792 ~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~--~-~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~~ 863 (874)
+||+||+.|++|+|||+.+. ..+.++. . ...+.+++|+|+.+.++++++.|+.|.+||+.+++.
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~--------~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~ 68 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKM--------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET 68 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT--------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE
T ss_pred eEEEEEcCCCEEEEEECCCC--------eEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcE
Confidence 58999999999999999986 2223332 2 234789999996443447788899999999998755
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=97.60 E-value=5.8e-05 Score=82.66 Aligned_cols=66 Identities=11% Similarity=0.007 Sum_probs=54.3
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 788 DRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 788 ~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
++++-+++|.+.|++|.|||.++. ..+..+..+..+..++||| ++.+||+++.||+|++||+.+++
T Consensus 29 ~~~~~~~v~~~d~g~v~v~D~~t~--------~v~~~~~~g~~~~~v~fSp-DG~~l~~~s~dg~v~~~d~~t~~ 94 (432)
T d1qksa2 29 DLENLFSVTLRDAGQIALIDGSTY--------EIKTVLDTGYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKE 94 (432)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTC--------CEEEEEECSSCEEEEEECT-TSCEEEEEETTSEEEEEETTSSS
T ss_pred CCCcEEEEEEcCCCEEEEEECCCC--------cEEEEEeCCCCeeEEEECC-CCCEEEEEcCCCCEEEEEeeCCC
Confidence 445455799999999999999987 3445555556789999999 58899999999999999998754
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.36 E-value=0.00022 Score=77.68 Aligned_cols=91 Identities=15% Similarity=0.185 Sum_probs=66.4
Q ss_pred eeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecC---------CCcEEEeeCCCCCCCCcccccCeeeecCCCceeEE
Q 002843 764 FEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGV---------SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCV 834 (874)
Q Consensus 764 ~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~---------dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l 834 (874)
.+....+..-.+..+...|.+++|||||++||.++. ++.+.|||+.+...... ..+...+..+
T Consensus 46 ~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l--------~~~~~~~~~~ 117 (470)
T d2bgra1 46 GNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITE--------ERIPNNTQWV 117 (470)
T ss_dssp CCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS--------SCCCTTEEEE
T ss_pred CCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCccccc--------ccCCcccccc
Confidence 333334444456667788999999999999998864 45678999998621111 1245678999
Q ss_pred EEeCCCCCEEEEeeCCCcEEEEeCCCccce
Q 002843 835 CWNNYIKNYLASADYDGVVKVCMSCRLSTY 864 (874)
Q Consensus 835 ~wnp~~~~~laS~~~Dg~V~~WD~~~~~~~ 864 (874)
+||| ++..||.. .|+.+.+|++.+++..
T Consensus 118 ~~SP-DG~~ia~~-~~~~l~~~~~~~g~~~ 145 (470)
T d2bgra1 118 TWSP-VGHKLAYV-WNNDIYVKIEPNLPSY 145 (470)
T ss_dssp EECS-STTCEEEE-ETTEEEEESSTTSCCE
T ss_pred cccc-CcceeeEe-ecccceEEECCCCcee
Confidence 9999 57788885 4788999999987553
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.31 E-value=0.00013 Score=75.01 Aligned_cols=75 Identities=7% Similarity=-0.030 Sum_probs=56.1
Q ss_pred CeeEEEECCCCCEEEEecCC----------CcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCC-EEEEeeC
Q 002843 781 VICSISFDRDEDHFAAAGVS----------KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKN-YLASADY 849 (874)
Q Consensus 781 ~V~si~F~~d~~~lAT~g~d----------k~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~-~laS~~~ 849 (874)
....++|+||+.+++.++.+ .+|.+||..+. ..+..+.....+.+++|+|+.+. ++|+++.
T Consensus 250 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~--------~~~~~~~~~~~~~~~a~spDG~~~l~v~~~~ 321 (355)
T d2bbkh_ 250 GWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG--------ERLAKFEMGHEIDSINVSQDEKPLLYALSTG 321 (355)
T ss_dssp SSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC--------CEEEEEEEEEEECEEEECCSSSCEEEEEETT
T ss_pred ceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCC--------cEEEEecCCCCEEEEEEcCCCCeEEEEEECC
Confidence 34568999999986554433 47999999976 23334444556889999997555 4678888
Q ss_pred CCcEEEEeCCCccc
Q 002843 850 DGVVKVCMSCRLST 863 (874)
Q Consensus 850 Dg~V~~WD~~~~~~ 863 (874)
|++|.|||+.+++.
T Consensus 322 d~~i~v~D~~tg~~ 335 (355)
T d2bbkh_ 322 DKTLYIHDAESGEE 335 (355)
T ss_dssp TTEEEEEETTTCCE
T ss_pred CCEEEEEECCCCCE
Confidence 99999999998864
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=97.18 E-value=0.00054 Score=71.05 Aligned_cols=66 Identities=6% Similarity=-0.036 Sum_probs=51.3
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCC-EEEEeeCCCcEEEEeCCCccc
Q 002843 790 DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKN-YLASADYDGVVKVCMSCRLST 863 (874)
Q Consensus 790 d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~-~laS~~~Dg~V~~WD~~~~~~ 863 (874)
++..++++..+++|.+||..++ ..+..+.+...+.+++|+|+.+. ++++++.|++|+|||+.+++.
T Consensus 287 ~~~~~~~~~~~~~v~~~d~~t~--------~~~~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~ 353 (373)
T d2madh_ 287 EQSAWKLHAAAKEVTSVTGLVG--------QTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCceEEeecCCCeEEEEECCCC--------cEEEEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCE
Confidence 3344556777889999999876 34555666778899999996554 458899999999999998855
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=97.04 E-value=0.00065 Score=70.42 Aligned_cols=77 Identities=8% Similarity=-0.106 Sum_probs=55.6
Q ss_pred CCCCCeeEEEECCCCCEEEEe-----cCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeC--
Q 002843 777 NSANVICSISFDRDEDHFAAA-----GVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY-- 849 (874)
Q Consensus 777 ~~~~~V~si~F~~d~~~lAT~-----g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~-- 849 (874)
.+...+.+++|+|||+.++.. +.+.+|.|||..++ ..+.++... ....++|+| ++.+||.+++
T Consensus 18 ~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg--------~~~~~~~~~-~~~~~a~Sp-DG~~l~va~~~~ 87 (373)
T d2madh_ 18 AADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSG--------SILGHVNGG-FLPNPVAAH-SGSEFALASTSF 87 (373)
T ss_pred cCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCC--------CEEEEEeCC-CCccEEEcC-CCCEEEEEeecC
Confidence 357889999999999986543 34567999998876 223333222 234799999 5778877754
Q ss_pred --------CCcEEEEeCCCccc
Q 002843 850 --------DGVVKVCMSCRLST 863 (874)
Q Consensus 850 --------Dg~V~~WD~~~~~~ 863 (874)
|++|.|||+.+++.
T Consensus 88 ~~~~~~~~~~~v~v~D~~t~~~ 109 (373)
T d2madh_ 88 SRIAKGKRTDYVEVFDPVTFLP 109 (373)
T ss_pred CcccccccceEEEEEECCCCcE
Confidence 57899999998765
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=96.89 E-value=0.0019 Score=65.04 Aligned_cols=90 Identities=14% Similarity=0.082 Sum_probs=58.8
Q ss_pred eEeEEec-ccCCCCCCCCeeEEEECCCCCE-EEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCC
Q 002843 765 EVQGMLR-TGEFNNSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKN 842 (874)
Q Consensus 765 ~~~~~l~-~~~~~~~~~~V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~ 842 (874)
....++. .............++|++|+++ ++++..+.++.+|++...-.. ........+...+.+++|+|+ +.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~spD-Gk 288 (333)
T d1ri6a_ 214 ECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSV----LSKEGFQPTETQPRGFNVDHS-GK 288 (333)
T ss_dssp EEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCC----EEEEEEEECSSSCCCEEECTT-SS
T ss_pred eeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCE----EEEEEEeCCCCCeeEEEEeCC-CC
Confidence 3444444 2333445678889999999997 777788899999998754110 011111223456789999996 55
Q ss_pred EEEEe-eCCCcEEEEeCC
Q 002843 843 YLASA-DYDGVVKVCMSC 859 (874)
Q Consensus 843 ~laS~-~~Dg~V~~WD~~ 859 (874)
+|+++ ..+++|+||++.
T Consensus 289 ~l~va~~~~~~v~v~~id 306 (333)
T d1ri6a_ 289 YLIAAGQKSHHISVYEIV 306 (333)
T ss_dssp EEEEECTTTCEEEEEEEE
T ss_pred EEEEEECCCCeEEEEEEE
Confidence 55554 557899999553
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.79 E-value=0.00072 Score=70.88 Aligned_cols=93 Identities=9% Similarity=-0.066 Sum_probs=57.4
Q ss_pred eceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEec----------CCCcEEEeeCCCCCCC-CcccccCeeeecCCCc
Q 002843 762 SKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG----------VSKKIKIFEFNALFND-SVDVYYPAVEMSNRSK 830 (874)
Q Consensus 762 ~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g----------~dk~Ikiwd~~~~~~~-~~~~~~p~~~~~~~~~ 830 (874)
...++++++..+ . ...++|+|||++|++++ .|++|.+||..++... .+..+.... ......
T Consensus 54 ~~~~~~~~~~~~-----~--~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~-~~~g~~ 125 (368)
T d1mdah_ 54 GCGVTLGHSLGA-----F--LSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR-FSVGPR 125 (368)
T ss_dssp TTTEEEEEEEEC-----T--TCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS-CCBSCC
T ss_pred CCCcEEEEEeCC-----C--CCcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccce-ecccCC
Confidence 455666666531 1 12589999999988754 4788999999986210 001110000 011122
Q ss_pred eeEEEEeCCCCCEEEEee-CCCcEEEEeCCCccc
Q 002843 831 LSCVCWNNYIKNYLASAD-YDGVVKVCMSCRLST 863 (874)
Q Consensus 831 v~~l~wnp~~~~~laS~~-~Dg~V~~WD~~~~~~ 863 (874)
..+++|+|+. .+|+.++ .+++|.+||+.+++.
T Consensus 126 p~~~a~SpDG-k~l~va~~~~~~v~~~d~~~~~~ 158 (368)
T d1mdah_ 126 VHIIGNCASS-ACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp TTSEEECTTS-SCEEEEECSSSCEEEEEETTTEE
T ss_pred ccceEECCCC-CEEEEEeCCCCeEEEEECCCCcE
Confidence 3579999964 4565555 579999999997644
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.58 E-value=0.0015 Score=66.73 Aligned_cols=93 Identities=13% Similarity=0.031 Sum_probs=57.9
Q ss_pred eceeEeEEecccCCCCCCCCeeEEEECCCCCEEEEec----------CCCcEEEeeCCCCCCC-CcccccCeeeecCCCc
Q 002843 762 SKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG----------VSKKIKIFEFNALFND-SVDVYYPAVEMSNRSK 830 (874)
Q Consensus 762 ~~~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g----------~dk~Ikiwd~~~~~~~-~~~~~~p~~~~~~~~~ 830 (874)
.+.++++++..| .+..++|||||++|+.++ .|++|+|||+.++... ....+.. ........
T Consensus 36 ~tg~~~~~~~~g-------~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~-~~~~~~~~ 107 (355)
T d2bbkh_ 36 EAGRVIGMIDGG-------FLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA-PRFLVGTY 107 (355)
T ss_dssp TTTEEEEEEEEC-------SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC-CCCCBSCC
T ss_pred CCCcEEEEEECC-------CCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCc-ceeecCCC
Confidence 356677777632 234799999999887654 4789999999986211 0000000 00011223
Q ss_pred eeEEEEeCCCCCEEEEee--CCCcEEEEeCCCccc
Q 002843 831 LSCVCWNNYIKNYLASAD--YDGVVKVCMSCRLST 863 (874)
Q Consensus 831 v~~l~wnp~~~~~laS~~--~Dg~V~~WD~~~~~~ 863 (874)
...++|+|. +.+++.++ .+..+.+||..++..
T Consensus 108 ~~~~~~s~d-g~~~~v~~~~~~~~~~~~~~~~~~~ 141 (355)
T d2bbkh_ 108 PWMTSLTPD-GKTLLFYQFSPAPAVGVVDLEGKAF 141 (355)
T ss_dssp GGGEEECTT-SSEEEEEECSSSCEEEEEETTTTEE
T ss_pred CceEEEecC-CCeeEEecCCCCceeeeeecCCCcE
Confidence 467899995 55555554 467899999997643
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.35 E-value=0.0021 Score=67.11 Aligned_cols=73 Identities=7% Similarity=-0.058 Sum_probs=52.4
Q ss_pred eEEEECCCCCEEEEec--C-------CCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCC-EEEEeeCCCc
Q 002843 783 CSISFDRDEDHFAAAG--V-------SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKN-YLASADYDGV 852 (874)
Q Consensus 783 ~si~F~~d~~~lAT~g--~-------dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~-~laS~~~Dg~ 852 (874)
..++++|++..+..+. . ..+|.+||..+. .++..+.....+.+++|+|+.+. +++++..|++
T Consensus 267 ~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~--------~~~~~~~~~~~~~~~a~spDG~~~ly~s~~~~~~ 338 (368)
T d1mdah_ 267 QMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG--------QTSGPISNGHDSDAIIAAQDGASDNYANSAGTEV 338 (368)
T ss_dssp SCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC--------CEEECCEEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred eeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCC--------cEeEEecCCCceeEEEECCCCCEEEEEEeCCCCe
Confidence 4688999999743332 1 236999999986 22333333456789999997666 4578888999
Q ss_pred EEEEeCCCccc
Q 002843 853 VKVCMSCRLST 863 (874)
Q Consensus 853 V~~WD~~~~~~ 863 (874)
|.|||+.+++.
T Consensus 339 v~v~D~~tgk~ 349 (368)
T d1mdah_ 339 LDIYDAASDQD 349 (368)
T ss_dssp EEEEESSSCEE
T ss_pred EEEEECCCCCE
Confidence 99999998765
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=95.33 E-value=0.038 Score=56.11 Aligned_cols=81 Identities=9% Similarity=0.078 Sum_probs=62.4
Q ss_pred eeEeEEecccCCCCCCCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCE
Q 002843 764 FEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNY 843 (874)
Q Consensus 764 ~~~~~~l~~~~~~~~~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~ 843 (874)
.++++++.. ..++.+|||+|||.+++|...+++|..||...... ........+.+|+|.|+ +++
T Consensus 18 ~~v~~~~p~------~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~---------~~~~~~~~~~gla~~~d-G~l 81 (302)
T d2p4oa1 18 AKIITSFPV------NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ---------IHATVEGKVSGLAFTSN-GDL 81 (302)
T ss_dssp EEEEEEECT------TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE---------EEEECSSEEEEEEECTT-SCE
T ss_pred ccEEEECCC------CCCcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEE---------EEEcCCCCcceEEEcCC-CCe
Confidence 457777764 34899999999999999999999999999764311 11123467899999994 778
Q ss_pred EEEeeCCCcEEEEeCCC
Q 002843 844 LASADYDGVVKVCMSCR 860 (874)
Q Consensus 844 laS~~~Dg~V~~WD~~~ 860 (874)
++++..++.+.+|+...
T Consensus 82 ~v~~~~~~~~~~~~~~~ 98 (302)
T d2p4oa1 82 VATGWNADSIPVVSLVK 98 (302)
T ss_dssp EEEEECTTSCEEEEEEC
T ss_pred EEEecCCceEEEEEecc
Confidence 88888888888888754
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.09 E-value=0.012 Score=63.40 Aligned_cols=74 Identities=7% Similarity=0.021 Sum_probs=52.5
Q ss_pred EEEECCCCCEEEEecCCCcEEEeeCCCCCCCCc-ccccCeeeecCCCceeEEEEeCCCCCEEEEe---------eCCCcE
Q 002843 784 SISFDRDEDHFAAAGVSKKIKIFEFNALFNDSV-DVYYPAVEMSNRSKLSCVCWNNYIKNYLASA---------DYDGVV 853 (874)
Q Consensus 784 si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~-~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~---------~~Dg~V 853 (874)
++.|.+|++|+... |+.|.+||+.++..... +.+ .+ -.+...|.+++|||+ +.+||.+ ++++.+
T Consensus 21 ~~~W~~d~~~~~~~--~~~~~~~~~~t~~~~~~~~~~-~~--~~~~~~i~~~~~SpD-g~~i~~~~~~~~~~r~s~~~~~ 94 (470)
T d2bgra1 21 SLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENS-TF--DEFGHSINDYSISPD-GQFILLEYNYVKQWRHSYTASY 94 (470)
T ss_dssp CCEECSSSEEEEES--SSCEEEEETTTCCEEEEECTT-TT--TTSSSCCCEEEECTT-SSEEEEEEEEEECSSSCEEEEE
T ss_pred CCEeCCCCEEEEEc--CCcEEEEECCCCCEEEEEchh-hh--hhccCccceeEECCC-CCEEEEEECCcceeeeccCceE
Confidence 67899999998764 67899999998732211 111 00 112356999999995 7788877 446788
Q ss_pred EEEeCCCccc
Q 002843 854 KVCMSCRLST 863 (874)
Q Consensus 854 ~~WD~~~~~~ 863 (874)
.|||+.+++.
T Consensus 95 ~l~d~~~~~~ 104 (470)
T d2bgra1 95 DIYDLNKRQL 104 (470)
T ss_dssp EEEETTTTEE
T ss_pred EEEECCCCcc
Confidence 9999998754
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=94.48 E-value=0.035 Score=54.87 Aligned_cols=28 Identities=14% Similarity=0.027 Sum_probs=24.2
Q ss_pred CcccCCCCCceEEecCCcEEEeccccch
Q 002843 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 350 IIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
++|+|+.|.|||++.++.+-|+||+.+.
T Consensus 185 l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 185 FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred EEEeeccCcceeecCCceEEEeechhcc
Confidence 7899999999999876666799998775
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=92.66 E-value=0.049 Score=59.32 Aligned_cols=77 Identities=13% Similarity=0.058 Sum_probs=51.8
Q ss_pred eeEEEECCCCCE-EEEecCCCcEEEeeCCCCC---CCCcccccCee-eecCCCceeEEEEeCCCCCEEEEeeCCCcEEEE
Q 002843 782 ICSISFDRDEDH-FAAAGVSKKIKIFEFNALF---NDSVDVYYPAV-EMSNRSKLSCVCWNNYIKNYLASADYDGVVKVC 856 (874)
Q Consensus 782 V~si~F~~d~~~-lAT~g~dk~Ikiwd~~~~~---~~~~~~~~p~~-~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~W 856 (874)
-..|+++|||+| +|+++.|.+|.|||+++.. ....+....+. +....-.....+|.+ .++.++|...|..|..|
T Consensus 260 PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~-~g~~yts~~~ds~v~kw 338 (441)
T d1qnia2 260 PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDG-RGNAYTTLFIDSQVCKW 338 (441)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECS-SSEEEEEETTTTEEEEE
T ss_pred ccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecC-CceEEEcccccceEEEe
Confidence 346999999998 7899999999999998742 11111000010 000011134568998 47788898889999999
Q ss_pred eCC
Q 002843 857 MSC 859 (874)
Q Consensus 857 D~~ 859 (874)
++.
T Consensus 339 ~~~ 341 (441)
T d1qnia2 339 NIA 341 (441)
T ss_dssp EHH
T ss_pred ccc
Confidence 985
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=92.34 E-value=0.085 Score=57.33 Aligned_cols=38 Identities=13% Similarity=0.052 Sum_probs=28.9
Q ss_pred ecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCCcc
Q 002843 825 MSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMSCRLS 862 (874)
Q Consensus 825 ~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~~~ 862 (874)
+.....-..+..+|+.+.+++|+..|++|+|||+.+..
T Consensus 254 IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~ 291 (441)
T d1qnia2 254 IPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLD 291 (441)
T ss_dssp ECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHH
T ss_pred EeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhh
Confidence 33333356799999766667888999999999998753
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=91.65 E-value=0.31 Score=50.72 Aligned_cols=81 Identities=12% Similarity=-0.048 Sum_probs=50.9
Q ss_pred CCCeeEEEECCCCCEEEEe-cCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEe
Q 002843 779 ANVICSISFDRDEDHFAAA-GVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCM 857 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~-g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD 857 (874)
...+.+++|+|||++++++ ....+|.+|++...-. .....++......+....++|+|..+...++.-.+++|.+||
T Consensus 144 ~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~--~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~ 221 (365)
T d1jofa_ 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE--VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC--EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCc--eeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEE
Confidence 3457899999999985444 4455888888664210 000011111122356788999996443445555689999999
Q ss_pred CCCc
Q 002843 858 SCRL 861 (874)
Q Consensus 858 ~~~~ 861 (874)
+...
T Consensus 222 ~~~~ 225 (365)
T d1jofa_ 222 IDPA 225 (365)
T ss_dssp ECTT
T ss_pred ecCC
Confidence 9754
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=90.07 E-value=0.42 Score=48.67 Aligned_cols=81 Identities=21% Similarity=0.227 Sum_probs=57.0
Q ss_pred eeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecC-CCceeEEEEeCCCCCEEEEeeCCCcEEEEeCCC
Q 002843 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSN-RSKLSCVCWNNYIKNYLASADYDGVVKVCMSCR 860 (874)
Q Consensus 782 V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~-~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~~~ 860 (874)
--.|+++.+|.++++....+.|.+||.++. .+..++.. ....++++|.|+.+.+.++.+..|+|.--|+..
T Consensus 228 pdGiavD~~GnlyVa~~~~g~I~~~dp~~g--------~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~ 299 (314)
T d1pjxa_ 228 ADGMDFDEDNNLLVANWGSSHIEVFGPDGG--------QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECTTCB--------SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred ceeeEEecCCcEEEEEcCCCEEEEEeCCCC--------EEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence 457999999998777777889999998865 12223332 356889999996555667777789888888764
Q ss_pred -ccc-eeeeeee
Q 002843 861 -LST-YCFRKKF 870 (874)
Q Consensus 861 -~~~-~~~~~~f 870 (874)
|+. ++.+.+|
T Consensus 300 ~G~~~~~~~~~~ 311 (314)
T d1pjxa_ 300 NGKKQYCETLKF 311 (314)
T ss_dssp CBCCCGGGSCTT
T ss_pred CChhhhcccccc
Confidence 433 4444444
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=90.07 E-value=0.084 Score=56.22 Aligned_cols=28 Identities=21% Similarity=0.166 Sum_probs=24.2
Q ss_pred CCcccCCCCCceEEecCCcEEEeccccch
Q 002843 349 GVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 349 gIIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
.++|+|+.|.|||++++ .++|+||-.+.
T Consensus 224 ~LiHGDl~~gNIlv~~~-~~~vID~E~a~ 251 (392)
T d2pula1 224 TLIHGDLHTGSIFASEH-ETKVIDPEFAF 251 (392)
T ss_dssp EEECSCCCGGGEEECSS-CEEECCCTTCE
T ss_pred ceeccCCcCCceeEcCC-ceEEechhhcc
Confidence 58999999999999865 48999997765
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=87.60 E-value=0.74 Score=44.15 Aligned_cols=72 Identities=8% Similarity=-0.003 Sum_probs=44.1
Q ss_pred CCCeeEEEECCCCCEEEEecCCC---cEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEE
Q 002843 779 ANVICSISFDRDEDHFAAAGVSK---KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKV 855 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk---~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~ 855 (874)
...|.+-+|||||++||=..... .+-+.+..+.. ......+.....+..|+|..+.++.....++...+
T Consensus 38 ~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~ 109 (269)
T d2hqsa1 38 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--------VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNL 109 (269)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred CCceeeeEECCCCCEEEEEEeeccCcceeeeecccCc--------eeEEeeeecccccceecCCCCeeeEeeecCCccce
Confidence 56688999999999988543332 35555655441 11223345678899999975545545544554444
Q ss_pred EeC
Q 002843 856 CMS 858 (874)
Q Consensus 856 WD~ 858 (874)
+..
T Consensus 110 ~~~ 112 (269)
T d2hqsa1 110 YVM 112 (269)
T ss_dssp EEE
T ss_pred eec
Confidence 433
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=87.28 E-value=0.37 Score=46.44 Aligned_cols=53 Identities=9% Similarity=0.199 Sum_probs=37.3
Q ss_pred CCCeeEEEECCCCCEEE---EecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCC
Q 002843 779 ANVICSISFDRDEDHFA---AAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNY 839 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lA---T~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~ 839 (874)
...+....|+|||++|| .-+....|.+|++... .+.........+...+|||+
T Consensus 213 ~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~--------~~~~lt~~~g~~~~p~WSP~ 268 (269)
T d2hqsa1 213 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR--------FKARLPATDGQVKFPAWSPY 268 (269)
T ss_dssp SSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC--------CEEECCCSSSEEEEEEECCC
T ss_pred CccccceEECCCCCEEEEEEcCCCCcEEEEEECCCC--------CEEEEeCCCCcEEeEEeCCC
Confidence 55667889999999876 4344568899998865 22222234556889999996
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=86.87 E-value=0.75 Score=45.93 Aligned_cols=78 Identities=12% Similarity=0.137 Sum_probs=58.2
Q ss_pred CCCeeEEEECCCCCEEEEecCCCcEEEeeCCCCCCCCcccccCeeeecCCCceeEEEEeCCCCCEEEEeeCCCcEEEEeC
Q 002843 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKVCMS 858 (874)
Q Consensus 779 ~~~V~si~F~~d~~~lAT~g~dk~Ikiwd~~~~~~~~~~~~~p~~~~~~~~~v~~l~wnp~~~~~laS~~~Dg~V~~WD~ 858 (874)
...+.+|+|+|||.++++...+..|.+|+...... ...++...........+++.+ +.+++++.+.++.|..+|.
T Consensus 67 ~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~n~i~~~~-~g~~~v~~~~~~~i~~~~~ 141 (302)
T d2p4oa1 67 EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG----TVETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDV 141 (302)
T ss_dssp SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS----CEEEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEET
T ss_pred CCCcceEEEcCCCCeEEEecCCceEEEEEeccccc----ceeeccccCCccccceeEEcc-CCCEEeeccccccceeeec
Confidence 45689999999999999888888999988765311 112333334445688999998 4778888888888888888
Q ss_pred CCc
Q 002843 859 CRL 861 (874)
Q Consensus 859 ~~~ 861 (874)
..+
T Consensus 142 ~~~ 144 (302)
T d2p4oa1 142 VQP 144 (302)
T ss_dssp TTT
T ss_pred cCC
Confidence 754
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=86.75 E-value=0.15 Score=51.98 Aligned_cols=44 Identities=18% Similarity=0.147 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHH----CCCcccCCCCCceEEecCCcEEEeccccch
Q 002843 334 IFRQIVALVDYHHT----QGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (874)
Q Consensus 334 I~~QIl~aL~yLHs----~gIIHRDLKPsNILL~~~~~vKLiDFGlar 377 (874)
.+..+...+.-.+. .||||+|+.++||+++.+...-|+||+.+.
T Consensus 165 ~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 165 EIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp HHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence 33334444444443 379999999999999987777899999764
|