Your job contains 1 sequence.
>002849
MMDTVGDDNWGNEWEKRDIGFIDFEDYKSECSYNPSEEDPVQISFPFPFIDGKPQSVSVG
ETAVDSITIKNTTREPVELWSKIYASTPENTFTLSVMKPPSPGSDSGTNRGFVEFFTLEE
RMIQPGQTLTIWLSCKPKGIGLHTTVLQFDVEDRIERVVFLLAEDKISQSLASKRPYSRG
GRKKQFSVDKYVVGSRPARYRGQIYQNRLPRYDIPNHIRELIERKQIPDAITDGLTLKNY
TSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIFAKH
AYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRVNMRRLYQATDAA
QELDTEFLFPSESSGIRLIESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTG
KTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRP
YEDVNADHIRFCFFDEQIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDE
AGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPY
CHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLF
FGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKAL
ESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRA
ISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPEREEFADEDPTAAECWNHEEEI
PQSFQEDNWNQEPFQAENLKPVKDEDEWSDGWHL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002849
(874 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2200996 - symbol:SDE3 "SILENCING DEFECTIVE" sp... 3013 0. 2
UNIPROTKB|F1NNW1 - symbol:MOV10 "Putative helicase MOV-10... 790 8.2e-123 2
UNIPROTKB|Q5ZKD7 - symbol:MOV10 "Putative helicase MOV-10... 785 2.8e-122 2
UNIPROTKB|Q9BXT6 - symbol:MOV10L1 "Putative helicase Mov1... 934 3.2e-119 2
MGI|MGI:1891384 - symbol:Mov10l1 "Moloney leukemia virus ... 915 4.1e-119 2
UNIPROTKB|E1BZJ8 - symbol:MOV10L1 "Uncharacterized protei... 943 6.7e-119 2
UNIPROTKB|F1RXR7 - symbol:MOV10L1 "Uncharacterized protei... 907 4.7e-118 2
UNIPROTKB|G3X7G5 - symbol:MOV10L1 "Uncharacterized protei... 922 7.6e-118 2
ZFIN|ZDB-GENE-061013-333 - symbol:zgc:154086 "zgc:154086"... 886 3.7e-116 2
RGD|1304735 - symbol:Mov10l1 "Mov10l1, Moloney leukemia v... 911 2.1e-91 1
ZFIN|ZDB-GENE-030131-9089 - symbol:mov10b.1 "Moloney leuk... 849 5.6e-88 2
ZFIN|ZDB-GENE-060526-371 - symbol:mov10b.2 "Moloney leuke... 840 7.2e-84 1
ZFIN|ZDB-GENE-091230-8 - symbol:mov10a "Moloney leukemia ... 828 1.3e-82 1
UNIPROTKB|Q0V8H6 - symbol:MOV10 "Putative helicase MOV-10... 812 6.6e-81 1
UNIPROTKB|F1SBP9 - symbol:MOV10 "Uncharacterized protein"... 810 1.1e-80 1
UNIPROTKB|F1P7T4 - symbol:MOV10 "Uncharacterized protein"... 805 3.7e-80 1
UNIPROTKB|J9P7Z9 - symbol:MOV10 "Uncharacterized protein"... 805 3.7e-80 1
MGI|MGI:97054 - symbol:Mov10 "Moloney leukemia virus 10" ... 797 2.6e-79 1
RGD|1598327 - symbol:Mov10 "Moloney leukemia virus 10" sp... 787 3.0e-78 1
UNIPROTKB|Q9HCE1 - symbol:MOV10 "Putative helicase MOV-10... 786 3.8e-78 1
FB|FBgn0033889 - symbol:CG6701 species:7227 "Drosophila m... 615 2.1e-57 2
FB|FBgn0041164 - symbol:armi "armitage" species:7227 "Dro... 412 1.9e-54 2
FB|FBgn0034187 - symbol:CG6967 species:7227 "Drosophila m... 474 4.3e-54 2
UNIPROTKB|E2R8C1 - symbol:HELZ "Uncharacterized protein" ... 513 3.4e-52 3
UNIPROTKB|F1RSM3 - symbol:HELZ "Uncharacterized protein" ... 511 3.2e-51 3
UNIPROTKB|F1NPN9 - symbol:LOC100857488 "Uncharacterized p... 544 3.8e-51 2
UNIPROTKB|P42694 - symbol:HELZ "Probable helicase with zi... 509 6.8e-51 3
MGI|MGI:1925705 - symbol:Helz "helicase with zinc finger ... 511 8.7e-51 3
UNIPROTKB|I6L9H4 - symbol:HELZ "Probable helicase with zi... 535 4.8e-50 2
UNIPROTKB|J3QS41 - symbol:HELZ "Probable helicase with zi... 535 3.7e-49 2
RGD|1307049 - symbol:Helz "helicase with zinc finger" spe... 536 4.2e-48 2
FB|FBgn0036451 - symbol:CG9425 species:7227 "Drosophila m... 512 8.0e-46 2
ZFIN|ZDB-GENE-040426-2419 - symbol:helz "helicase with zi... 507 2.0e-45 2
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 479 4.6e-42 1
ASPGD|ASPL0000056713 - symbol:AN0646 species:162425 "Emer... 395 1.4e-41 2
SGD|S000004685 - symbol:NAM7 "ATP-dependent RNA helicase ... 370 2.3e-40 2
UNIPROTKB|G4ND47 - symbol:MGG_00976 "Regulator-nonsense t... 461 3.7e-40 1
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 457 1.0e-39 1
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 457 1.1e-39 1
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 397 1.2e-39 3
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 367 2.3e-39 3
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 453 2.8e-39 1
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 451 2.9e-39 1
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 459 5.8e-39 2
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 457 2.0e-38 2
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 457 2.0e-38 2
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 457 2.1e-38 2
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 353 2.3e-38 3
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 441 4.8e-38 1
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 441 4.8e-38 1
UNIPROTKB|F1MKC7 - symbol:Bt.110099 "Uncharacterized prot... 396 3.8e-37 3
TAIR|locus:2056896 - symbol:AT2G03270 species:3702 "Arabi... 305 3.9e-37 2
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 440 7.6e-36 2
RGD|1306056 - symbol:Pric285 "peroxisomal proliferator-ac... 424 1.8e-35 1
DICTYBASE|DDB_G0271732 - symbol:DDB_G0271732 "AN1-type zi... 339 4.9e-35 3
SGD|S000001500 - symbol:HCS1 "Hexameric DNA polymerase al... 299 6.0e-35 2
UNIPROTKB|E1C0Z0 - symbol:HELZ2 "Uncharacterized protein"... 417 8.8e-35 1
UNIPROTKB|E2R760 - symbol:IGHMBP2 "Uncharacterized protei... 269 2.8e-34 2
UNIPROTKB|E2R8W1 - symbol:IGHMBP2 "Uncharacterized protei... 269 2.9e-34 2
UNIPROTKB|P38935 - symbol:IGHMBP2 "DNA-binding protein SM... 260 1.3e-33 2
ZFIN|ZDB-GENE-070912-617 - symbol:si:dkey-97a13.6 "si:dke... 405 1.9e-33 1
UNIPROTKB|F1RY71 - symbol:IGHMBP2 "Uncharacterized protei... 279 5.7e-33 2
UNIPROTKB|Q9BYK8 - symbol:HELZ2 "Helicase with zinc finge... 399 8.1e-33 1
TAIR|locus:2130384 - symbol:MAA3 "MAGATAMA 3" species:370... 363 8.7e-33 2
RGD|68325 - symbol:Ighmbp2 "immunoglobulin mu binding pro... 270 1.0e-32 2
UNIPROTKB|Q9EQN5 - symbol:Ighmbp2 "DNA-binding protein SM... 270 1.0e-32 2
UNIPROTKB|F1MHU8 - symbol:IGHMBP2 "Uncharacterized protei... 277 3.1e-32 2
UNIPROTKB|Q60560 - symbol:IGHMBP2 "DNA-binding protein SM... 268 3.5e-32 2
UNIPROTKB|E1BY42 - symbol:E1BY42 "Uncharacterized protein... 262 3.5e-32 2
MGI|MGI:99954 - symbol:Ighmbp2 "immunoglobulin mu binding... 265 9.5e-32 2
UNIPROTKB|E2RBM4 - symbol:PRIC285 "Uncharacterized protei... 410 2.9e-31 3
POMBASE|SPAC6G9.10c - symbol:sen1 "ATP-dependent 5' to 3'... 332 5.6e-30 2
ZFIN|ZDB-GENE-070402-1 - symbol:setx "senataxin" species:... 311 8.4e-29 2
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 325 1.8e-28 3
UNIPROTKB|E1C4T7 - symbol:Gga.18015 "Uncharacterized prot... 336 2.2e-28 4
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 320 2.5e-28 3
MGI|MGI:2443480 - symbol:Setx "senataxin" species:10090 "... 325 5.3e-28 4
DICTYBASE|DDB_G0268924 - symbol:DDB_G0268924 "Helicase SE... 354 6.6e-28 2
TAIR|locus:2018561 - symbol:AT1G65810 species:3702 "Arabi... 310 7.7e-28 3
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 284 7.8e-28 3
CGD|CAL0006154 - symbol:orf19.6199 species:5476 "Candida ... 257 8.6e-28 2
UNIPROTKB|Q5AAW1 - symbol:HCS1 "Putative uncharacterized ... 257 8.6e-28 2
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 364 1.9e-27 2
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 263 2.3e-27 3
UNIPROTKB|F1S0U6 - symbol:SETX "Uncharacterized protein" ... 313 3.6e-27 3
GENEDB_PFALCIPARUM|MAL7P1.12 - symbol:MAL7P1.12 "erythroc... 364 3.9e-27 2
UNIPROTKB|Q8IC35 - symbol:MAL7P1.12 "Erythrocyte membrane... 364 3.9e-27 2
UNIPROTKB|E1BAS6 - symbol:SETX "Uncharacterized protein" ... 301 5.2e-27 3
UNIPROTKB|F1PHA4 - symbol:SETX "Uncharacterized protein" ... 308 1.3e-26 3
POMBASE|SPBC29A10.10c - symbol:SPBC29A10.10c "tRNA-splici... 306 2.2e-26 3
TAIR|locus:2059088 - symbol:AT2G19120 "AT2G19120" species... 294 5.2e-26 3
UNIPROTKB|F1RMM8 - symbol:LOC100519780 "Uncharacterized p... 336 5.6e-26 1
TAIR|locus:2126480 - symbol:AT4G30100 species:3702 "Arabi... 291 6.3e-26 4
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 350 1.0e-25 3
CGD|CAL0003335 - symbol:SEN1 species:5476 "Candida albica... 318 5.1e-25 2
TAIR|locus:2173033 - symbol:AT5G52090 species:3702 "Arabi... 249 6.3e-25 2
UNIPROTKB|J9NRI6 - symbol:DNA2 "Uncharacterized protein" ... 316 6.8e-25 1
RGD|1306791 - symbol:Dna2 "DNA replication helicase 2 hom... 319 9.6e-25 1
UNIPROTKB|G4NIZ8 - symbol:MGG_02784 "DNA-binding protein ... 294 1.3e-24 3
DICTYBASE|DDB_G0274399 - symbol:DDB_G0274399 "DNA2/NAM7 h... 289 2.4e-24 2
WARNING: Descriptions of 68 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2200996 [details] [associations]
symbol:SDE3 "SILENCING DEFECTIVE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0009616
"virus induced gene silencing" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR026127 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG1112 EMBL:AC005106 GO:GO:0003724 GO:GO:0035194
GO:GO:0009616 HOGENOM:HOG000239755 EMBL:AF339908 EMBL:AK117698
IPI:IPI00521883 PIR:C86189 RefSeq:NP_172037.1 UniGene:At.15329
UniGene:At.42398 ProteinModelPortal:Q8GYD9 SMR:Q8GYD9 STRING:Q8GYD9
PaxDb:Q8GYD9 PRIDE:Q8GYD9 EnsemblPlants:AT1G05460.1 GeneID:837047
KEGG:ath:AT1G05460 GeneFarm:2423 TAIR:At1g05460 InParanoid:Q8GYD9
OMA:DEREGNN PhylomeDB:Q8GYD9 ProtClustDB:CLSN2682016
Genevestigator:Q8GYD9 GermOnline:AT1G05460 PANTHER:PTHR10887:SF165
Uniprot:Q8GYD9
Length = 1002
Score = 3013 (1065.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 567/871 (65%), Positives = 702/871 (80%)
Query: 7 DDNWGNEWEKRDIGFIDFEDYKSECSYNPSEEDPVQISFPFPFIDGKPQSVSVGETAVDS 66
DD + +K +IGFID+++ S YNP +E PV +S PFPF KPQSV+VGET+ DS
Sbjct: 9 DDEYSVIADKGEIGFIDYQNDGSSGCYNPFDEGPVVVSVPFPFKKEKPQSVTVGETSFDS 68
Query: 67 ITIKNTTREPVELWSKIYASTPENTFTLSVMKPPSPGSDSGTNRGFVEFFTLEERMIQPG 126
T+KNT EPV+LW+KIYAS PE++FTLS++KPPS SD + F E FTLE+RM++PG
Sbjct: 69 FTVKNTMDEPVDLWTKIYASNPEDSFTLSILKPPSKDSDLKERQCFYETFTLEDRMLEPG 128
Query: 127 QTLTIWLSCKPKGIGLHTTVLQFDV-EDRIERVVFLLAEDKISQSLASKRPYSRGGR--K 183
TLTIW+SCKPK IGLHTTV+ D DR+ERVVFLLAEDKIS SL S RPYSR R K
Sbjct: 129 DTLTIWVSCKPKDIGLHTTVVTVDWGSDRVERVVFLLAEDKISSSLTSNRPYSRSRRAPK 188
Query: 184 KQFSVDKYVVGSRPARYRGQIYQNRLPRYDIPNHIRELIERKQIPDAITDGLTLKNYTSF 243
K F+VD YV GSRP++ + ++NRLP Y+IP IRE+IE K+ PD + +GLT +NY ++
Sbjct: 189 KDFAVDDYVKGSRPSKVVERSFRNRLPLYEIPKEIREMIENKEFPDDLNEGLTARNYANY 248
Query: 244 FKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIFAKHAYE 303
+KTLLIMEE+QL+EDMRAYDMENV++ R+G+YLSL VPGLAERRPSLV+GDFIF +HAY+
Sbjct: 249 YKTLLIMEELQLEEDMRAYDMENVSMKRRGIYLSLEVPGLAERRPSLVHGDFIFVRHAYD 308
Query: 304 D-TSSAYQGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRVNMRRLYQATDAAQE 362
D T AYQGF+HRVEADEVH+KFAS+F H ++YNV+FTYNR+N RRLYQA DAA+
Sbjct: 309 DGTDHAYQGFVHRVEADEVHMKFASEFHQRHTAGSVYNVRFTYNRINTRRLYQAVDAAEM 368
Query: 363 LDTEFLFPSESSGIRLIESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKT 422
LD FLFPS SG R+I++ VPIS LN EQ+CSIE +LG KGAPPY+I+GPPGTGKT
Sbjct: 369 LDPNFLFPSLHSGKRMIKTKPFVPISPALNAEQICSIEMVLGCKGAPPYVIHGPPGTGKT 428
Query: 423 MTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYE 482
MTLVEAI+QLY T+ +AR+LVCAPSNSAADH+LEK+L + V +++NEIFRLNA +R YE
Sbjct: 429 MTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEIFRLNAATRSYE 488
Query: 483 DVNADHIRFCFFDEQIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAG 542
++ + IRFCFFDE IFKCPPL AL Y++++STYMSASL+ AEGV+RGHF+HI LDEAG
Sbjct: 489 EIKPEIIRFCFFDELIFKCPPLKALTRYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAG 548
Query: 543 QASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCH 602
QASEPE+M+ +S+ C +TVVVLAGDP QLGPVIYSR+AE+ G+GKSYLERLFEC+ YC
Sbjct: 549 QASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCE 608
Query: 603 GNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFG 662
G+ENYVTKLV+NYR HP+IL LPSKLFY+ EL+A K+++ S A LNFLPNKEFP++F+G
Sbjct: 609 GDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLASLNFLPNKEFPMVFYG 668
Query: 663 IQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALES 722
IQGCDEREG+NPSWFNRIE+SKV+E I++LT+ + EEDIGVITPYRQQV+K+ + L+
Sbjct: 669 IQGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEEDIGVITPYRQQVMKIKEVLDR 728
Query: 723 LYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAIS 782
L M ++KVGSVEQFQGQE+QVII+STVRSTIKHN+FDR +CLGFLSNPRRFNVA+TRAIS
Sbjct: 729 LDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAIS 788
Query: 783 LLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPEREEFADEDPTAAECWNHEEEIPQ 842
LL+IIGNPHI+ KD W++LLW C DNN+YQGC LPE+EEF +E P E ++ + P
Sbjct: 789 LLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPEQEEFVEE-PFKQEGSSNGPQYPP 847
Query: 843 SFQEDNWNQEPFQAENLKPVKDEDEWSDGWH 873
E WN + N + EWSDGW+
Sbjct: 848 ---EAEWNNSG-ELNN-GGANENGEWSDGWN 873
Score = 65 (27.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 824 ADEDPTAAECWNHEEEIPQSFQ-EDNWNQEPFQAENLKPVKDEDEWSDGW 872
A+E+ ++ WN+ + + D WN N K +DEWSDGW
Sbjct: 862 ANENGEWSDGWNNNGGTKEKNEWSDGWNS------NGGGTKKKDEWSDGW 905
Score = 62 (26.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 846 EDNWNQEPFQAENLKPVKDEDEWSDGW 872
E+ N F+ K+EDEWSDGW
Sbjct: 975 EEIKNGGKFETRGDFVAKEEDEWSDGW 1001
Score = 60 (26.2 bits), Expect = 0., Sum P(2) = 0.
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 807 SDNNSYQGCALPEREEFAD--EDPTAAECWNHE--EEIPQSFQEDNWNQEPFQAENLKPV 862
SD + G +++E++D ++ N E PQ QE WN + +N
Sbjct: 885 SDGWNSNGGGTKKKDEWSDGWDNNGGTNGINQEGSSNAPQDPQEAEWNDSG-EVKN-GGT 942
Query: 863 KDEDEWSDGWH 873
K++D SDGW+
Sbjct: 943 KEKDVRSDGWN 953
>UNIPROTKB|F1NNW1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 OMA:VRFFKLD IPI:IPI00594294
EMBL:AADN02045008 Ensembl:ENSGALT00000002368 Uniprot:F1NNW1
Length = 735
Score = 790 (283.2 bits), Expect = 8.2e-123, Sum P(2) = 8.2e-123
Identities = 197/483 (40%), Positives = 285/483 (59%)
Query: 238 KNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIF 297
+NY F+ LL +EEIQL+ D+R YD++ V +++ L L VPG+AE RPS++ GD +F
Sbjct: 99 ENYKQKFELLLHLEEIQLEMDIRRYDLQEVPMVQNRALLLLNVPGVAENRPSVLRGDHLF 158
Query: 298 AKHAYEDTSSA---YQGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRVNMRRLY 354
A + E SS Y+G++H VE + V L F+ ++ ++V FT+NR+ ++ +
Sbjct: 159 ASLSSERDSSPRVLYKGYVHGVELERVQLGFSPKLMKKFVNDLKFDVTFTFNRLPLQVQH 218
Query: 355 QATDAAQE--LDTEFLFPSESSGIRLIESNTLVPI----SCNLNEEQMCSIEKIL-GLKG 407
+A A + LD+ LFPS S R + + P NEEQ +++ I+ G+
Sbjct: 219 RAAAMAMQKGLDS-VLFPSASCQ-RSLFTGIFQPRWFDRKVEANEEQCQAVKHIVTGMSR 276
Query: 408 APPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVR 467
PYLI+GPPGTGKT+TLVEAI Q+++ +DAR+L CAPSNSAAD L +++L +
Sbjct: 277 PAPYLIFGPPGTGKTVTLVEAIKQVWSCFKDARILACAPSNSAADLLCQRLL----TNIA 332
Query: 468 ENEIFRLNAPSRPYEDVNADHIRFCFFD--EQIFKCPPLAALVCYRIIISTYMSASLIYA 525
I+R+ A S Y+DV AD C +D E+ + P L YRI+I+T ++A + +
Sbjct: 333 PRYIYRIMASSANYKDVPADVRPCCNWDDSEKCYVYPSKKLLKPYRILITTLVTAGRLVS 392
Query: 526 EGVDRGHFSHIFLDEAGQASEPESMVPISSYCKK---DT-----VVVLAGDPMQLGPVIY 577
G+FSH+F+DE G A EPES+V I+ DT +VLAGDP QLGPV+
Sbjct: 393 ANFPPGYFSHVFIDECGHAVEPESVVAIAGLLTTMDPDTNRNGGQLVLAGDPQQLGPVLR 452
Query: 578 SREAETYGMGKSYLERLFECEP-YCHGNENY----VTKLVRNYRSHPQILHLPSKLFYEE 632
S A +G+G S LERL Y +E Y VTKL+ NYRSH IL +P++LFY+
Sbjct: 453 SPLAAQHGLGTSLLERLMLHNALYAKSDEGYNPQFVTKLLWNYRSHKAILKVPNELFYDS 512
Query: 633 ELIACK-DESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEII 689
EL A + E Y + LPN+ P++F G+ G DERE +PS+FN E+ VV+ +
Sbjct: 513 ELKAYEGSEPDVRNFYCTWEELPNRGVPIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYL 572
Query: 690 QKL 692
QKL
Sbjct: 573 QKL 575
Score = 438 (159.2 bits), Expect = 8.2e-123, Sum P(2) = 8.2e-123
Identities = 94/194 (48%), Positives = 131/194 (67%)
Query: 651 LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLT-STGN-----LSEEDIG 704
LPN+ P++F G+ G DERE +PS+FN E+ VV+ +QKL S G +S ++IG
Sbjct: 534 LPNRGVPIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKEIG 593
Query: 705 VITPYRQQVLKLNKALESL-----YMPDI---KVGSVEQFQGQERQVIIVSTVRSTIKHN 756
+I+PYR+QV K+ A+ S +PDI KVGSVE+FQGQER+VI++STVRS ++
Sbjct: 594 IISPYRKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTVRSCSEYL 653
Query: 757 DFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCA 816
D+ LGFL NP+R NVA+TRA +LLI++GN ++SKDP+WH+ L YC D +Y+G
Sbjct: 654 QLDQTFRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKDPHWHRFLRYCRDEGAYRG-- 711
Query: 817 LPEREEFADEDPTA 830
P EE +ED A
Sbjct: 712 YPYEEEPPEEDSLA 725
>UNIPROTKB|Q5ZKD7 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4
CTD:4343 EMBL:AJ720147 IPI:IPI00594294 RefSeq:NP_001012861.1
UniGene:Gga.1182 ProteinModelPortal:Q5ZKD7 STRING:Q5ZKD7
PRIDE:Q5ZKD7 GeneID:419872 KEGG:gga:419872 InParanoid:Q5ZKD7
NextBio:20822865 Uniprot:Q5ZKD7
Length = 967
Score = 785 (281.4 bits), Expect = 2.8e-122, Sum P(2) = 2.8e-122
Identities = 197/483 (40%), Positives = 284/483 (58%)
Query: 238 KNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIF 297
+NY F+ LL +EEIQL+ D+R YD++ V +++ L L VPG+AE RPS++ GD +F
Sbjct: 331 ENYKQKFELLLHLEEIQLEVDIRRYDLQEVPMVQNRALLLLNVPGVAENRPSVLRGDHLF 390
Query: 298 AKHAYEDTSSA---YQGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRVNMRRLY 354
A + E SS Y+G++H VE + V L F+ ++ ++V FT+NR+ ++ +
Sbjct: 391 ASLSSERDSSPRVLYKGYVHGVELERVQLGFSPKLMKKFVNDLKFDVTFTFNRLPLQVQH 450
Query: 355 QATDAAQE--LDTEFLFPSESSGIRLIESNTLVPI----SCNLNEEQMCSIEKIL-GLKG 407
+A A + LD+ LFPS S R + + P NEEQ +++ I+ G+
Sbjct: 451 RAAAMAMQKGLDS-VLFPSASCQ-RSLFTGIFQPRWFDRKVEANEEQCQAVKHIVTGMSR 508
Query: 408 APPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVR 467
PYLI+GPPGTGKT+TLVEAI Q+++ +DAR+L CAPSNSAAD L +++L +
Sbjct: 509 PAPYLIFGPPGTGKTVTLVEAIKQVWSCFKDARILACAPSNSAADLLCQRLL----TNIA 564
Query: 468 ENEIFRLNAPSRPYEDVNADHIRFCFFD--EQIFKCPPLAALVCYRIIISTYMSASLIYA 525
I+R+ A S Y+DV AD C +D E+ + P L YRI+I+T ++A + +
Sbjct: 565 PRYIYRIMASSANYKDVPADVRPCCNWDDSEKCYVYPSKKLLKPYRILITTLVTAGRLVS 624
Query: 526 EGVDRGHFSHIFLDEAGQASEPESMVPISSYCKK---DT-----VVVLAGDPMQLGPVIY 577
G+FSH+F+DE G A EPES+V I+ DT +VLAGDP QLGPV
Sbjct: 625 ANFPPGYFSHVFIDECGHAVEPESVVAIAGLLTTMDPDTNPNGGQLVLAGDPQQLGPVPR 684
Query: 578 SREAETYGMGKSYLERLFECEP-YCHGNENY----VTKLVRNYRSHPQILHLPSKLFYEE 632
S A +G+G S LERL Y +E Y VTKL+ NYRSH IL +P++LFY+
Sbjct: 685 SPLAAQHGLGTSLLERLMLHNALYAKSDEGYNPQFVTKLLWNYRSHKAILKVPNELFYDS 744
Query: 633 ELIACK-DESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEII 689
EL A + E Y + LPN+ P++F G+ G DERE +PS+FN E+ VV+ +
Sbjct: 745 ELKAYEGSEPDVRNFYCTWEELPNRGVPIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYL 804
Query: 690 QKL 692
QKL
Sbjct: 805 QKL 807
Score = 438 (159.2 bits), Expect = 2.8e-122, Sum P(2) = 2.8e-122
Identities = 94/194 (48%), Positives = 131/194 (67%)
Query: 651 LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLT-STGN-----LSEEDIG 704
LPN+ P++F G+ G DERE +PS+FN E+ VV+ +QKL S G +S ++IG
Sbjct: 766 LPNRGVPIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKEIG 825
Query: 705 VITPYRQQVLKLNKALESL-----YMPDI---KVGSVEQFQGQERQVIIVSTVRSTIKHN 756
+I+PYR+QV K+ A+ S +PDI KVGSVE+FQGQER+VI++STVRS ++
Sbjct: 826 IISPYRKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTVRSCSEYL 885
Query: 757 DFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCA 816
D+ LGFL NP+R NVA+TRA +LLI++GN ++SKDP+WH+ L YC D +Y+G
Sbjct: 886 QLDQTFRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKDPHWHRFLRYCRDEGAYRG-- 943
Query: 817 LPEREEFADEDPTA 830
P EE +ED A
Sbjct: 944 YPYEEEPPEEDSLA 957
>UNIPROTKB|Q9BXT6 [details] [associations]
symbol:MOV10L1 "Putative helicase Mov10l1" species:9606
"Homo sapiens" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000287 "magnesium ion
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0007281 "germ cell development" evidence=IEP] [GO:0005622
"intracellular" evidence=IC] GO:GO:0007275 GO:GO:0005524
GO:GO:0000287 GO:GO:0007283 GO:GO:0003723 GO:GO:0005622
GO:GO:0007281 eggNOG:COG1112 GO:GO:0004004 EMBL:AL022328
EMBL:AF285604 EMBL:AK000033 EMBL:AK090740 EMBL:CR456466
EMBL:AL034546 EMBL:BC150137 EMBL:BC152539 EMBL:AL133068
IPI:IPI00005638 IPI:IPI00178391 IPI:IPI00215671 IPI:IPI00853536
PIR:T42668 RefSeq:NP_001157576.1 RefSeq:NP_001157577.1
RefSeq:NP_001157578.1 RefSeq:NP_061868.1 UniGene:Hs.62880
ProteinModelPortal:Q9BXT6 SMR:Q9BXT6 STRING:Q9BXT6
PhosphoSite:Q9BXT6 DMDM:22095856 PaxDb:Q9BXT6 PeptideAtlas:Q9BXT6
PRIDE:Q9BXT6 DNASU:54456 Ensembl:ENST00000262794
Ensembl:ENST00000354853 Ensembl:ENST00000395843
Ensembl:ENST00000395852 Ensembl:ENST00000395858
Ensembl:ENST00000545383 GeneID:54456 KEGG:hsa:54456 UCSC:uc003bjj.3
UCSC:uc003bjl.3 UCSC:uc003bjm.1 CTD:54456 GeneCards:GC22P050528
HGNC:HGNC:7201 HPA:HPA019034 MIM:605794 neXtProt:NX_Q9BXT6
PharmGKB:PA30909 HOVERGEN:HBG052382 InParanoid:Q9BXT6 KO:K13983
OMA:NMSGVTL OrthoDB:EOG49GKFV PhylomeDB:Q9BXT6 GenomeRNAi:54456
NextBio:56697 ArrayExpress:Q9BXT6 Bgee:Q9BXT6 CleanEx:HS_MOV10L1
Genevestigator:Q9BXT6 GermOnline:ENSG00000073146 InterPro:IPR026125
PANTHER:PTHR10887:SF6 Uniprot:Q9BXT6
Length = 1211
Score = 934 (333.8 bits), Expect = 3.2e-119, Sum P(2) = 3.2e-119
Identities = 208/444 (46%), Positives = 284/444 (63%)
Query: 391 LNEEQMCSIEKILGLKGAP-PYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
LNE Q ++++IL P PY+++GPPGTGKT+T++EA+LQ++ D+R+LVCAPSNS
Sbjct: 745 LNENQKLAVKRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHFALPDSRILVCAPSNS 804
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIR-FCFFDEQIFKCPPLAALV 508
AAD + ++ K ++ + R+NA R +E++ D ++ +C E I+K
Sbjct: 805 AADLVCLRLHESKVLQPAT--MVRVNATCR-FEEIVIDAVKPYCRDGEDIWKASR----- 856
Query: 509 CYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGD 568
+RIII+T S+ L Y GV GHF+H+F+DEAGQASEPE ++P+ +VLAGD
Sbjct: 857 -FRIIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPECLIPLGLMSDISGQIVLAGD 915
Query: 569 PMQLGPVIYSREAETYGMGKSYLERLFECEPY---------CHG-NENYVTKLVRNYRSH 618
PMQLGPVI SR A YG+ S+LERL Y C N VTKLV+NYRSH
Sbjct: 916 PMQLGPVIKSRLAMAYGLNVSFLERLMSRPAYQRDENAFGACGAHNPLLVTKLVKNYRSH 975
Query: 619 PQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNPSW 676
+L LPS+LFY EL C D ++ T+ L + LP K FP++F G++G + REG +PSW
Sbjct: 976 EALLMLPSRLFYHRELEVCADPTV-VTSLLGWEKLPKKGFPLIFHGVRGSEAREGKSPSW 1034
Query: 677 FNRIEVSKVVEIIQKLTST--GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVE 734
FN E +V+ L + +S DIGVITPYR+QV K+ L ++ + DIKVGSVE
Sbjct: 1035 FNPAEAVQVLRYCCLLAHSISSQVSASDIGVITPYRKQVEKIRILLRNVDLMDIKVGSVE 1094
Query: 735 QFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVS 794
+FQGQE VII+STVRS + DR + LGFLSN +RFNVA+TR +LLI++GNPH++
Sbjct: 1095 EFQGQEYLVIIISTVRSNEDRFEDDR-YFLGFLSNSKRFNVAITRPKALLIVLGNPHVLV 1153
Query: 795 KDPYWHQLLWYCSDNNSYQGCALP 818
+DP + LL Y N Y GC LP
Sbjct: 1154 RDPCFGALLEYSITNGVYMGCDLP 1177
Score = 260 (96.6 bits), Expect = 3.2e-119, Sum P(2) = 3.2e-119
Identities = 78/264 (29%), Positives = 127/264 (48%)
Query: 122 MIQPGQTLTIWLSCKPKGIGLHTTVLQFDVED----RIERVVFLLAEDKISQSLASKRPY 177
++ PG I + C K G +L D R V + E+ + +A++ P+
Sbjct: 404 LVPPGGKTFIVVICDGKNPGRCKELLLLCFSDFLIGRYLEVNVISGEESL---IAAREPF 460
Query: 178 SRGGRKKQFSVDK----YVVGSRPARYRGQIYQNRLPRYDIPNHIRELIERK----QIPD 229
S K ++ VV ++ R Q+ + LP+Y IP+ +R+ +E+K
Sbjct: 461 SWKKLKSSQALTSAKTTVVVTAQKRNSRRQL-PSFLPQYPIPDRLRKCVEQKIDILTFQP 519
Query: 230 AITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPS 289
+ + L + NY F TLL +EEI + +++ Y+M + L R G L L VPGLAE RPS
Sbjct: 520 LLAELLNMSNYKEKFSTLLWLEEIYAEMELKEYNMSGIILRRNGDLLVLEVPGLAEGRPS 579
Query: 290 LVNGDFIFAK-HAYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRV 348
L GD + K Y + Y ++ + ++V LK +F+ + E + +V+FTYNR
Sbjct: 580 LYAGDKLILKTQEYNGHAIEYISYVTEIHEEDVTLKINPEFEQAYNFEPM-DVEFTYNRT 638
Query: 349 NMRRLYQATDAAQELDTEFLFPSE 372
RR + A + L + LFP E
Sbjct: 639 TSRRCHFALEHVIHLGVKVLFPEE 662
Score = 40 (19.1 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 821 EEFADEDPTAAECWNHEEEIPQSFQ 845
EE + P WNH ++ S Q
Sbjct: 661 EEIILQSPQVTGNWNHAQDTKSSGQ 685
Score = 37 (18.1 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 621 ILHLPSKLFYEEELI 635
++HL K+ + EE+I
Sbjct: 650 VIHLGVKVLFPEEII 664
>MGI|MGI:1891384 [details] [associations]
symbol:Mov10l1 "Moloney leukemia virus 10-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045786 "negative regulation
of cell cycle" evidence=IDA] MGI:MGI:1891384 GO:GO:0005524
GO:GO:0005737 GO:GO:0008283 GO:GO:0007283 GO:GO:0007517
GO:GO:0004386 eggNOG:COG1112 GO:GO:0045786 CTD:54456
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AF285587 EMBL:AF340211 EMBL:AY303754
EMBL:AK084786 IPI:IPI00118099 IPI:IPI00227971 IPI:IPI00453884
RefSeq:NP_112550.2 UniGene:Mm.358791 ProteinModelPortal:Q99MV5
SMR:Q99MV5 STRING:Q99MV5 PhosphoSite:Q99MV5 PaxDb:Q99MV5
PRIDE:Q99MV5 DNASU:83456 GeneID:83456 KEGG:mmu:83456
HOGENOM:HOG000015363 InParanoid:Q99MV5 NextBio:350584
CleanEx:MM_MOV10L1 Genevestigator:Q99MV5
GermOnline:ENSMUSG00000015365 Uniprot:Q99MV5
Length = 1187
Score = 915 (327.2 bits), Expect = 4.1e-119, Sum P(2) = 4.1e-119
Identities = 209/444 (47%), Positives = 282/444 (63%)
Query: 391 LNEEQMCSIEKILGLKGAP-PYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
LNE Q ++ +IL P PY+++GPPGTGKT+T++EA+LQ++ D+R+LVCAPSNS
Sbjct: 747 LNENQKLAVRRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHYALPDSRILVCAPSNS 806
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIR-FCFFDEQIFKCPPLAALV 508
AAD + + L E V + + R+NA R +E+ D I+ +C E I++
Sbjct: 807 AADLVCLR-LHESKVP-KPAAMVRVNATCR-FEETIIDAIKPYCRDGEDIWRASR----- 858
Query: 509 CYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGD 568
+RIII+T SA L Y GV G+F+H+F+DEAGQASEPE ++P+ + +VLAGD
Sbjct: 859 -FRIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGD 917
Query: 569 PMQLGPVIYSREAETYGMGKSYLERLFECEPY---------CHG-NENYVTKLVRNYRSH 618
PMQLGPVI SR A YG+ S LERL Y C N VTKLV+NYRSH
Sbjct: 918 PMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDENAFGACGAYNPLLVTKLVKNYRSH 977
Query: 619 PQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNPSW 676
+L LPS+LFY EL C D + T+ L + LP K FP++F G++G + REG +PSW
Sbjct: 978 SALLALPSRLFYHRELEVCADPKV-VTSLLGWEKLPRKGFPLIFHGVRGNEAREGRSPSW 1036
Query: 677 FNRIEVSKVVEIIQKLTST--GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVE 734
F+ E +V+ L + +S +DIGVITPYR+QV K+ L ++ + DIKVGSVE
Sbjct: 1037 FSPAEAVQVMRYCCLLARSVSSQVSSKDIGVITPYRKQVEKIKILLRNVDLTDIKVGSVE 1096
Query: 735 QFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVS 794
+FQGQE VI++STVRS + DR + LGFLSN +RFNVA+TR +LLII+GNPH++
Sbjct: 1097 EFQGQEYLVIVISTVRSNEDRFEDDR-YFLGFLSNSKRFNVAITRPKALLIILGNPHVLV 1155
Query: 795 KDPYWHQLLWYCSDNNSYQGCALP 818
+DP + LL Y N Y GC LP
Sbjct: 1156 RDPCFGALLEYSVSNGVYTGCDLP 1179
Score = 278 (102.9 bits), Expect = 4.1e-119, Sum P(2) = 4.1e-119
Identities = 81/261 (31%), Positives = 127/261 (48%)
Query: 122 MIQPGQTLTIWLSCKPKGIGLHTTVLQFDVED-RIERVVFLLAEDKISQSLASKRPYS-R 179
+I PG+ I ++C K G +L D I R + + +A + P+S +
Sbjct: 344 LIPPGEKTHIVVTCSAKNPGRCKELLLLCFSDFLIGRHLEVSVVSSEEALIAVREPFSWK 403
Query: 180 GGRKKQFSVDK---YVVGSRPARYRGQIYQNRLPRYDIPNHIRELIERK----QIPDAIT 232
+ Q V VV ++ R Q+ + LP+Y IP+ +++ +E+K +
Sbjct: 404 KPKSSQTLVSAKTTVVVTTQKRNSRRQL-PSFLPQYPIPDRLKKCVEQKIDILTFQPLLA 462
Query: 233 DGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSLVN 292
+ L + NY F TLL +EEI + +++ Y+M V L RKG L L VPGLAE RPSL
Sbjct: 463 ELLNMSNYKEKFSTLLWLEEIHAEIELKEYNMSRVVLKRKGDLLVLEVPGLAESRPSLYA 522
Query: 293 GDFIFAK-HAYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRVNMR 351
GD + K Y Y G++ + ++V LK F+ + E + +V+FTYNR R
Sbjct: 523 GDKLILKSQEYNGHVIEYIGYVMEIHEEDVTLKLNPGFEQMYNFEPM-DVEFTYNRTTSR 581
Query: 352 RLYQATDAAQELDTEFLFPSE 372
R + A + L + LFP E
Sbjct: 582 RCHYALEQVIHLGVKVLFPEE 602
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 943 (337.0 bits), Expect = 6.7e-119, Sum P(2) = 6.7e-119
Identities = 207/443 (46%), Positives = 290/443 (65%)
Query: 391 LNEEQMCSIEKILGLKGAP-PYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
LN++Q ++++IL + P PY+++GPPGTGKT+T+VEAILQ++ T D+R+LVCAPSN+
Sbjct: 752 LNKQQKLAVKRILSGECRPTPYILFGPPGTGKTITVVEAILQIHFTLPDSRILVCAPSNA 811
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIR-FCFFDEQIFKCPPLAALV 508
A D + ++ ++ ++ + R+NA R E ++ D ++ +C + I+K V
Sbjct: 812 ATDLICLRL--HQSNLLKPGAMVRVNATCRSTEQID-DIVKPYCKDGDDIWKA------V 862
Query: 509 CYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGD 568
+RIII+T SA + Y G GHF+H+ LDEAGQASEPES++PI + + +VL GD
Sbjct: 863 WFRIIITTCSSAGMFYQTGTRLGHFTHVILDEAGQASEPESLIPIGLISEVNGQIVLVGD 922
Query: 569 PMQLGPVIYSREAETYGMGKSYLERLFECEPYCH--------GNEN--YVTKLVRNYRSH 618
P QLGP+I SR A +G+ S LERL + Y G+ N +TKLV NYRSH
Sbjct: 923 PKQLGPLIKSRIAVAFGLNISLLERLISRDMYLRDEDAFSADGSYNPLLITKLVNNYRSH 982
Query: 619 PQILHLPSKLFYEEELIACKDESI-SCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWF 677
+L LPSKLFY +EL C D S+ S + LP K FP++F G++G + REG +PSWF
Sbjct: 983 SALLALPSKLFYHKELEVCADTSVVSSLLHWEKLPRKGFPLIFHGVRGKETREGHSPSWF 1042
Query: 678 NRIEVSKVVEIIQKLTSTGNL--SEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQ 735
N E +V++ L ++ S DIGVITPYR+QV K+ L S+ + DIKVG+VE+
Sbjct: 1043 NPTEAVQVMQYCCHLAKNESIAVSVTDIGVITPYRKQVEKIKFLLRSIDLSDIKVGTVEE 1102
Query: 736 FQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSK 795
FQGQE V I+STVRS + + ++CLGFLSNP+RFNVA+TRA +LLI+IGNPH++ K
Sbjct: 1103 FQGQECMVTILSTVRS-YEDTFAEEEYCLGFLSNPKRFNVAITRAKALLIVIGNPHLLVK 1161
Query: 796 DPYWHQLLWYCSDNNSYQGCALP 818
DP + LL Y NN+Y GC LP
Sbjct: 1162 DPCFCALLEYSLMNNAYIGCDLP 1184
Score = 248 (92.4 bits), Expect = 6.7e-119, Sum P(2) = 6.7e-119
Identities = 80/267 (29%), Positives = 125/267 (46%)
Query: 119 EERMIQPGQTLTIWLSCKPKGIGLHTTVLQFDVED-RIERVVFLLAEDKISQSLASKRPY 177
EE +I PG + + C G +L D I R + ++ +A P+
Sbjct: 338 EEIVIPPGGKTFVVIICTAINPGYSKELLLLGFSDFTIGRCIETTVTNEAELLIAPVEPF 397
Query: 178 SRGGRKKQF-SVD---KYVVGSRPARYRGQIYQNRLPRYDIPNHIRELIERK----QIPD 229
S RK SV K V + R + + + LP Y IPN +R +E+K
Sbjct: 398 S--ARKVDITSVPQQKKTTVIAPKYRRNSRKFPSFLPHYTIPNELRRCVEQKLDILSFQP 455
Query: 230 AITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPS 289
+ L L+NY + F TLL +EEI + +++ +DM VTL R G L L VPG+ E RP
Sbjct: 456 LLAAHLNLENYEAKFSTLLWLEEIYQEMEIKKFDMCGVTLKRNGNLLVLEVPGVEEGRPH 515
Query: 290 LVNGDFIFAK-HAYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRV 348
L GD + K Y + Y ++ + ++V LK +DF+ + E + +V+F + R+
Sbjct: 516 LAAGDKVILKSQVYSEHIIEYIAYVTEICNEDVTLKCNADFERAYNSEPM-DVEFVHCRI 574
Query: 349 NMRRLYQATDAAQ---ELDTEFLFPSE 372
RR A + A+ E + E LFP +
Sbjct: 575 PSRRCQLAVEQAKCLGEKELEVLFPEK 601
Score = 47 (21.6 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 457 KILGEKAVEVRENEIFRLNAPSRPYEDVNADHI-RFCFFDEQIFKC 501
K LGEK +EV E L +P + V ++I +C D+ + +C
Sbjct: 587 KCLGEKELEVLFPEKLILQSP----QAVKTENISEYCGVDDGLEQC 628
>UNIPROTKB|F1RXR7 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:BX321913 Ensembl:ENSSSCT00000001066
Uniprot:F1RXR7
Length = 1211
Score = 907 (324.3 bits), Expect = 4.7e-118, Sum P(2) = 4.7e-118
Identities = 201/445 (45%), Positives = 282/445 (63%)
Query: 391 LNEEQMCSIEKILGLKGAP-PYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
LNE Q ++++IL P PY+++GPPGTGKT+T++EA+LQ++ D+R+LVCAPSNS
Sbjct: 743 LNENQQLAVKRILSGDCRPLPYVLFGPPGTGKTVTVIEAVLQVFHALPDSRILVCAPSNS 802
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIR-FCFFDEQIFKCPPLAALV 508
AAD + ++ + + R + R+NA R +E+ D I+ +C E +++
Sbjct: 803 AADLVCLRLHESRGL--RPGAMVRVNATCR-FEETILDAIKPYCRDGEDVWRASR----- 854
Query: 509 CYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGD 568
+R++I+T SA L Y G+ GHF+H+F+DEAGQASEPE ++P+ D ++LAGD
Sbjct: 855 -FRVVITTCSSAGLFYQIGLRVGHFTHVFVDEAGQASEPECLIPLGLISDIDGQIILAGD 913
Query: 569 PMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENY----------VTKLVRNYRSH 618
PMQLGPVI SR A YG+ S LERL Y + + VTKLV+NYRSH
Sbjct: 914 PMQLGPVIKSRLAMAYGLNVSMLERLMARPAYLRDEDAFGACGAYNPLLVTKLVKNYRSH 973
Query: 619 PQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNPSW 676
+L LPS+LFY EL C D + T+ L + LP K FP++F G++G + REG +PSW
Sbjct: 974 SALLALPSRLFYHRELEVCADPKV-VTSLLGWEKLPRKGFPLVFHGVRGTEAREGRSPSW 1032
Query: 677 FNRIEVSKVVEIIQKLTST--GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVE 734
FN E +V+ L + +S DIGVITPYR+QV K+ L ++ + ++KVGSVE
Sbjct: 1033 FNPTEAVQVMRYCCLLARSVSSQVSAGDIGVITPYRKQVEKIKILLRNVGLAEVKVGSVE 1092
Query: 735 QFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHI-V 793
+FQGQE VII+STVRS + DR + LGFLSN +RFNVA+TR +LLI++GNPH+ V
Sbjct: 1093 EFQGQEYLVIIISTVRSNEDRFEDDR-YFLGFLSNSKRFNVAITRPKALLIVLGNPHVLV 1151
Query: 794 SKDPYWHQLLWYCSDNNSYQGCALP 818
+DP + LL Y + Y GC LP
Sbjct: 1152 RQDPCFGALLEYSITSGVYTGCNLP 1176
Score = 276 (102.2 bits), Expect = 4.7e-118, Sum P(2) = 4.7e-118
Identities = 82/263 (31%), Positives = 127/263 (48%)
Query: 122 MIQPGQTLTIWLSCKPKGIGLHTTVLQFDVEDRIERVVFLLAEDKISQS---LASKRPYS 178
+I PG + +C K G +L D + V L D +S+ +A + P+S
Sbjct: 405 LIPPGGKTMLVTTCDAKNPGRCRELLLLCFSDFV--VGRFLEVDVVSEEESLVAVREPFS 462
Query: 179 -RGGRKKQFSVDK---YVVGSRPARYRGQIYQNRLPRYDIPNHIRELIERKQ----IPDA 230
+ R S VV ++ R Q+ + LP+Y P+ +++ +E+K
Sbjct: 463 WKKSRTSPASASTKTTVVVTTQKRNSRRQL-PSFLPQYPTPDRLKKCVEQKMDILTFQPL 521
Query: 231 ITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSL 290
+ + L + NY F TLL +EEI + ++R Y+M VTL R G L L VPGLAE RPSL
Sbjct: 522 LAELLNMSNYKEKFSTLLWLEEIHAEMELREYNMSGVTLKRNGGLLVLEVPGLAESRPSL 581
Query: 291 VNGDFIFAKHA-YEDTSSAYQGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRVN 349
GD + K Y+ Y G++ + + V LK +F+ + E + +V+FTYNR
Sbjct: 582 YAGDKLILKTPEYDGHVIEYIGYVVEIREENVTLKLNPEFEQTYNFEPM-DVEFTYNRTT 640
Query: 350 MRRLYQATDAAQELDTEFLFPSE 372
RR + A + L + LFP E
Sbjct: 641 SRRCHFALEQVVHLGAKVLFPEE 663
Score = 55 (24.4 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 12/45 (26%), Positives = 18/45 (40%)
Query: 821 EEFADEDPTAAECWNHEEEIPQSFQEDNWNQEPFQAENLKPVKDE 865
EE + P W+H + PQ Q + N + KP +E
Sbjct: 662 EEVILQSPQVTWNWSHARDPPQDGQSTSKNNRKATKDQTKPAPEE 706
>UNIPROTKB|G3X7G5 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:DAAA02015125 EMBL:DAAA02015122
EMBL:DAAA02015123 EMBL:DAAA02015124 Ensembl:ENSBTAT00000027109
Uniprot:G3X7G5
Length = 1214
Score = 922 (329.6 bits), Expect = 7.6e-118, Sum P(2) = 7.6e-118
Identities = 204/444 (45%), Positives = 281/444 (63%)
Query: 391 LNEEQMCSIEKILGLKGAP-PYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
LNE Q ++ +IL P PY+++GPPGTGKT+T++EAILQ++ D+R+LVCAPSNS
Sbjct: 748 LNENQKLAVRRILSGDCRPIPYVLFGPPGTGKTVTIIEAILQVFHALPDSRILVCAPSNS 807
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIR-FCFFDEQIFKCPPLAALV 508
AAD + ++ +A+ R + R+NA R +E+ + IR +C E ++K
Sbjct: 808 AADLVCLRLHESRAL--RPGTMVRVNATCR-FEETITEAIRPYCRDGEDVWKASR----- 859
Query: 509 CYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGD 568
+R++I+T SA L Y G+ GHF+H+F+DEAGQASEPE ++P+ +VLAGD
Sbjct: 860 -FRVLITTCSSAGLFYQIGLRVGHFTHVFVDEAGQASEPECLIPLGLVSDVSGQIVLAGD 918
Query: 569 PMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENY----------VTKLVRNYRSH 618
PMQLGPVI SR A YG+ S LERL Y + + VTKLV+NYRSH
Sbjct: 919 PMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDEDAFGACGAYNPLLVTKLVKNYRSH 978
Query: 619 PQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNPSW 676
+L LPS+LFY EL C D ++ + L + LP K FP++F G++G + REG +PSW
Sbjct: 979 SALLALPSRLFYHRELEVCADPTV-VASLLGWEKLPRKGFPLIFHGVRGNEAREGRSPSW 1037
Query: 677 FNRIEVSKVVEIIQKLTST--GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVE 734
FN E +V+ L + +S DIGVITPYR+QV K+ L ++ + DIKVGSVE
Sbjct: 1038 FNPAEAVQVMRYCCMLARSVSSQVSARDIGVITPYRKQVEKIKILLRNVDLMDIKVGSVE 1097
Query: 735 QFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVS 794
+FQGQE V+I+STVRS + DR + LGFLSN +RFNVA+TR +LLI++GNPH++
Sbjct: 1098 EFQGQEYLVVIISTVRSNEDRFEDDR-YFLGFLSNSKRFNVAITRPKALLIVLGNPHVLV 1156
Query: 795 KDPYWHQLLWYCSDNNSYQGCALP 818
+DP + LL Y N Y GC LP
Sbjct: 1157 RDPCFGALLEYSITNGVYTGCDLP 1180
Score = 259 (96.2 bits), Expect = 7.6e-118, Sum P(2) = 7.6e-118
Identities = 79/261 (30%), Positives = 124/261 (47%)
Query: 122 MIQPGQTLTIWLSCKPKGIGLHTTVLQFDVEDRI-ERVVFLLAEDKISQSLASKRPYS-R 179
+I G I ++C K G +L I R + + + +A + P+S +
Sbjct: 407 LIPAGGETRIVITCDAKNSGRCRELLLLCFSSFIIGRYLEVNVVSEEESLIAVREPFSWK 466
Query: 180 GGRKKQF--SVDKYVVGSRPARYRGQIYQNRLPRYDIPNHIRELIERK----QIPDAITD 233
+ Q S VV + R + + LP+Y IP+ +++ +E+K + +
Sbjct: 467 KSKSSQVLASTKTTVVVTTQKRNSRRQLPSFLPQYPIPDRLKKCVEQKIDILTFQPLLAE 526
Query: 234 GLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSLVNG 293
L + NY F TLL +EEI + +++ Y+M VTL R G L L VPGLAE RPSL G
Sbjct: 527 LLNMSNYKEKFSTLLWLEEIHAEIELKEYNMSGVTLKRNGDLLVLEVPGLAESRPSLYAG 586
Query: 294 DFIFAK-HAYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRVNMRR 352
D + K Y Y G++ + ++V LK +F+ + E + +V+FTYNR RR
Sbjct: 587 DKLILKTQEYNGHVIEYIGYVVEIHEEDVTLKLNPEFEQAYNFEPM-DVEFTYNRTTSRR 645
Query: 353 LYQATDAAQELDT-EFLFPSE 372
+ A + L E LFP E
Sbjct: 646 CHFALEQVIHLGAKEVLFPEE 666
>ZFIN|ZDB-GENE-061013-333 [details] [associations]
symbol:zgc:154086 "zgc:154086" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-061013-333 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR025223 Pfam:PF14444
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 HOGENOM:HOG000015363 EMBL:BC124807
IPI:IPI00611882 RefSeq:NP_001070795.1 UniGene:Dr.40096
ProteinModelPortal:Q08BA5 GeneID:768184 KEGG:dre:768184
NextBio:20918499 Uniprot:Q08BA5
Length = 1106
Score = 886 (316.9 bits), Expect = 3.7e-116, Sum P(2) = 3.7e-116
Identities = 191/437 (43%), Positives = 279/437 (63%)
Query: 390 NLNEEQMCSIEKILGLKGAP-PYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSN 448
+LN Q ++ +IL + P PY+++GPPGTGKT+TL+EAILQ++ +R+LVC PSN
Sbjct: 672 DLNAAQKQAVRRILSGESRPTPYVLFGPPGTGKTITLIEAILQVHHRISCSRVLVCTPSN 731
Query: 449 SAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPPLAALV 508
SAAD + ++ + + + R+NA RP E ++ + ++ E I A+
Sbjct: 732 SAADLICMRL--HHSGFLHSASLARVNATCRPEESMSEELRQYARAGEDIRH----ASF- 784
Query: 509 CYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGD 568
+RI++ST SA + Y G+ GHF+H+F+DEAGQA+EPE+++P+S + +VLAGD
Sbjct: 785 -HRIVVSTCSSAGMFYQIGLRVGHFTHVFVDEAGQATEPETLIPLSLLSETSGQIVLAGD 843
Query: 569 PMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENY----VTKLVRNYRSHPQILHL 624
P QLGPV+ SR A +G+G S LERL Y G + VTKL+ NYRSH +L L
Sbjct: 844 PKQLGPVVKSRLASVFGLGVSLLERLMGNSLYACGERGFNPLLVTKLLYNYRSHEALLDL 903
Query: 625 PSKLFYEEEL-IACKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVS 683
PS+LFY EL + + ++ + N LP + FP++F G++G + REG NPSWFN E
Sbjct: 904 PSRLFYAGELCVRAQRAAVDSLCHWNKLPTRGFPLIFHGVRGSEMREGCNPSWFNPAEAV 963
Query: 684 KVVEIIQKLTST--GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQER 741
+V+ +L +S DIGVI PYR+QV K+ L+ + + ++KVGSVE+FQGQE
Sbjct: 964 QVMMYCCQLAKRLYNPISAADIGVIAPYRKQVEKIRVLLQRVGLGEVKVGSVEEFQGQEF 1023
Query: 742 QVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQ 801
++I+STVRS + + + LGFLSNP+RFNVA+TRA +LLI+IGNPH++ K+P +
Sbjct: 1024 LIMILSTVRSNESLLNEELQCMLGFLSNPKRFNVAITRAKALLIVIGNPHVLIKEPCFSA 1083
Query: 802 LLWYCSDNNSYQGCALP 818
LL Y DN ++ GC P
Sbjct: 1084 LLQYSYDNRAFIGCDPP 1100
Score = 279 (103.3 bits), Expect = 3.7e-116, Sum P(2) = 3.7e-116
Identities = 91/330 (27%), Positives = 155/330 (46%)
Query: 55 QSVSV--GETAVDSITIKNTTREPVELWSKIYASTPENTFTLSVMKPPSPGSDSGTNRGF 112
QSV + G+ + I ++N E +L + A ++ SV + S D GT
Sbjct: 279 QSVCLLMGDCSELLIWVQNCGSERQQLQRCVCAGW-DSAQQFSV-RSVSRCEDGGTEAPP 336
Query: 113 VEFFTLEERM-IQPGQTLTIWLSCKPKGIGLHTTVL-----QFDVEDRIERVVFLLAEDK 166
V LEE + I PGQ + + + C K +G + +L F + R+E V + E
Sbjct: 337 VRM--LEEPLDIHPGQKMCVCVCCTAKTLGRSSELLLLHFSSFTIGRRLELSVSSVEEQL 394
Query: 167 ISQSLASKRPYSRGGRKKQFSVDKYVVGSRPARYRGQIYQNRLPRYDIPNHIRELIERKQ 226
++ S+ P + + V P R + N L Y +P +RE +E ++
Sbjct: 395 LNPSMPYCSPSAPAQLPQPLQVLTVSAPPTPLRLTRRHLPNFLGNYGVPQALRECVEAQK 454
Query: 227 ----IPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPG 282
+ A+ + L+L+ F LL +EE+Q + ++R + + L R +YL L VPG
Sbjct: 455 DVLVVQPALAEALSLRTMLPRFSALLWLEELQAEREIREFSLTGAILRRGAVYLHLEVPG 514
Query: 283 LAERRPSLVNGD-FIFAKHAYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHRDENLYNV 341
LAE RPSL GD + K Y ++ + ++V L+ ++FQ ++ E L +V
Sbjct: 515 LAEGRPSLFIGDKVVLKKPCSGGVVIEYIAYVTEISDEDVSLRVNAEFQSSYLGEPL-DV 573
Query: 342 QFTYNRVNMRRLYQATDAAQELDTEFLFPS 371
+F++NR+ MRR + A + ++ LFPS
Sbjct: 574 EFSFNRLTMRRCHCALEQSKHFGENILFPS 603
Score = 38 (18.4 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 251 EEIQLKEDMRAYDMENVTLMRKGLYLSLVVP-GLAE 285
EE +L+ED+ + + +R G+ L V GL +
Sbjct: 23 EEQRLREDLMPDGVAQIRQVRTGVVTHLCVDYGLID 58
>RGD|1304735 [details] [associations]
symbol:Mov10l1 "Mov10l1, Moloney leukemia virus 10-like 1,
homolog (mouse)" species:10116 "Rattus norvegicus" [GO:0007281
"germ cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] RGD:1304735
GeneTree:ENSGT00550000074391 InterPro:IPR026125
PANTHER:PTHR10887:SF6 IPI:IPI00560261 Ensembl:ENSRNOT00000050620
ArrayExpress:F1M357 Uniprot:F1M357
Length = 550
Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
Identities = 207/444 (46%), Positives = 283/444 (63%)
Query: 391 LNEEQMCSIEKILGLKGAP-PYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
LNE Q ++ +IL P PY+++GPPGTGKT+T++EA+LQ++ D+R+LVCAPSNS
Sbjct: 110 LNENQKLAVRRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHYALPDSRILVCAPSNS 169
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIR-FCFFDEQIFKCPPLAALV 508
AAD + + L E V ++ + R+NA R +E+ + I+ +C E I++
Sbjct: 170 AADLVCLR-LHESKV-LKPAAMVRVNATCR-FEETIIEAIKPYCRDGEDIWRASR----- 221
Query: 509 CYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGD 568
+RIII+T SA L Y GV G+F+H+F+DEAGQASEPE ++P+ + +VLAGD
Sbjct: 222 -FRIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGD 280
Query: 569 PMQLGPVIYSREAETYGMGKSYLERLFECEPY---------CHG-NENYVTKLVRNYRSH 618
PMQLGPVI SR A YG+ S LERL Y C N VTKLV+NYRSH
Sbjct: 281 PMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDENAFGACGAYNPLLVTKLVKNYRSH 340
Query: 619 PQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNPSW 676
+L LPS+LFY EL C D + T+ L + LP K FP++F G++G + REG +PSW
Sbjct: 341 SALLALPSRLFYHRELEVCADPKV-VTSLLGWEKLPRKGFPLIFHGVRGNEAREGRSPSW 399
Query: 677 FNRIEVSKVVEIIQKLTS--TGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVE 734
F+ E +V+ L + +S +DIGVITPYR+QV K+ L ++ + DIKVGSVE
Sbjct: 400 FSPAEAVQVMRYCCLLARNVSSQVSSKDIGVITPYRKQVEKIKILLRNVDLTDIKVGSVE 459
Query: 735 QFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVS 794
+FQGQE VI++STVRS + DR + LGFLSN +RFNVA+TR +LLI++GNPH++
Sbjct: 460 EFQGQEYLVIVISTVRSNEDRFEDDR-YFLGFLSNSKRFNVAITRPKALLIVLGNPHVLV 518
Query: 795 KDPYWHQLLWYCSDNNSYQGCALP 818
+DP + LL Y N Y GC LP
Sbjct: 519 RDPCFGALLEYSVTNGVYTGCDLP 542
>ZFIN|ZDB-GENE-030131-9089 [details] [associations]
symbol:mov10b.1 "Moloney leukemia virus 10,
homolog, b.1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003593
SMART:SM00382 ZFIN:ZDB-GENE-030131-9089 GO:GO:0005524 GO:GO:0003723
GO:GO:0004386 GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:BX323059 EMBL:BC171375
IPI:IPI00801311 RefSeq:NP_001037807.2 UniGene:Dr.74181
ProteinModelPortal:Q1LXK4 STRING:Q1LXK4 Ensembl:ENSDART00000086946
GeneID:556024 KEGG:dre:556024 CTD:556024 HOGENOM:HOG000239755
InParanoid:Q1LXK4 OMA:NLVGECY OrthoDB:EOG4SXNC4 NextBio:20881283
Bgee:Q1LXK4 Uniprot:Q1LXK4
Length = 1013
Score = 849 (303.9 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 204/513 (39%), Positives = 309/513 (60%)
Query: 235 LTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMR---KGLYLSLVVPGLAERRPSLV 291
L+ NY F LL +EE Q++ D++ Y+ ++V+++R K L L L +PG++E RPS++
Sbjct: 361 LSFNNYMDRFDLLLYLEEDQMRMDIKRYNKKDVSMVRDRDKKL-LVLELPGVSENRPSVL 419
Query: 292 NGDFIFAKHAYEDTSS---AYQGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRV 348
GD + + E +S Y+G++HRVE D+V L F+ D ++V+FT NR+
Sbjct: 420 RGDHLLLTKSEELQNSNVTKYKGYVHRVELDQVKLGFSKRLLERFIDNMKFSVEFTINRL 479
Query: 349 NMRRLYQATD-AAQELDTEFLFPSESSGIRLIESNTLVPISCNL--NEEQMCSIEKILGL 405
+R ++A Q + LFP S + + + L L N EQ ++ I+
Sbjct: 480 PLRLQHRAVHMVVQHHLKDVLFPVASRRLNPVSPSALRLFDQKLEKNPEQKTAVCNIVAG 539
Query: 406 KGAP-PYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAV 464
P PYL++GPPGTGKT+T+VEAI Q+ AR+L CAPSNSAAD L EK++ + V
Sbjct: 540 TSKPAPYLVFGPPGTGKTVTIVEAIKQVEKNTGGARILACAPSNSAADQLGEKLITSQHV 599
Query: 465 EVRENEIFRLNAPSRPYEDVNA--DHIRFCFFDEQIFKCPPLAALVCYRIIISTYMSASL 522
+ R I+R+ A SR +++ ++ + IF C L+ Y+I++ T ++A
Sbjct: 600 DARN--IYRIYASSRNPKEIPKVLENNSNVEGENIIFPCKE--DLMPYKIVVCTLVTAGR 655
Query: 523 IYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDT-VVVLAGDPMQLGPVIYSREA 581
+ + G GHFSHIF+DEAG A EPE ++ ++ +T +VLAGDP QLGP++ S A
Sbjct: 656 LVSGGFPVGHFSHIFVDEAGHAVEPEIVISVAGLLNAETGQLVLAGDPKQLGPILRSPFA 715
Query: 582 ETYGMGKSYLERLF-ECEPYCHGN---EN-YVTKLVRNYRSHPQILHLPSKLFYEEELIA 636
YG+G S LERL + E Y G+ +N YVTKL++NYRSHP IL +P++LFY+ EL A
Sbjct: 716 IKYGLGLSLLERLMTQNELYQKGDTGFDNRYVTKLLQNYRSHPSILKVPNELFYDNELKA 775
Query: 637 CKDESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTS 694
C DE IS Y + LP + FPV+F G+ G DERE ++PS+FN E+ K+++ ++KL
Sbjct: 776 CADE-ISSRQYCTWEHLPKRGFPVIFHGVVGKDERESTSPSFFNTSEIDKIMDYLKKLLL 834
Query: 695 T------GNLSEEDIGVITPYRQQVLKLNKALE 721
T +S +DIG+I PYR+QV K+ +A++
Sbjct: 835 TQAKKGIAKISPKDIGIIAPYRKQVEKIRQAIK 867
Score = 532 (192.3 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 115/236 (48%), Positives = 160/236 (67%)
Query: 603 GNEN-YVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVL 659
G +N YVTKL++NYRSHP IL +P++LFY+ EL AC DE IS Y + LP + FPV+
Sbjct: 741 GFDNRYVTKLLQNYRSHPSILKVPNELFYDNELKACADE-ISSRQYCTWEHLPKRGFPVI 799
Query: 660 FFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTST------GNLSEEDIGVITPYRQQV 713
F G+ G DERE ++PS+FN E+ K+++ ++KL T +S +DIG+I PYR+QV
Sbjct: 800 FHGVVGKDERESTSPSFFNTSEIDKIMDYLKKLLLTQAKKGIAKISPKDIGIIAPYRKQV 859
Query: 714 ------LKLNKALESLY-MPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGF 766
+K+++ L+SL + ++KVGSVE+FQGQER+VIIVSTVRS+ +H D K +GF
Sbjct: 860 EKIRQAIKIHRELKSLSGIEELKVGSVEEFQGQERKVIIVSTVRSSKEHIILDDKFNIGF 919
Query: 767 LSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPEREE 822
L N +RFNVAVTRA +LLI++GNP I+ D W + + YC Y G + EE
Sbjct: 920 LKNEKRFNVAVTRAKALLIMVGNPIILRTDEIWGRFMNYCIQERGYTGYDITHLEE 975
Score = 49 (22.3 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 27/134 (20%), Positives = 60/134 (44%)
Query: 112 FVEFFTLEERM---------IQPGQTLTIWLSCKPKGIGLHTTVLQFDVEDRIER----- 157
++++FTL++ ++P +T + L K IG++ L F+ ++ +
Sbjct: 208 YLQYFTLDDSQRVRKDNPHRLEPNETYEVILRFKSDQIGVYPATLAFEFKENQDTRPFHI 267
Query: 158 VVFLLAEDK--ISQSLASKRPY--SR--GGRKKQFSVDKYVVGSRPARYRGQIYQNRLP- 210
V F+ A+ + ++ L P+ R + ++S+D+ G +P + +P
Sbjct: 268 VRFIEAQHRSELTAQLGPTEPFRPKRLDTNQPMKWSIDE---GFKPESSSQNFLKFVVPL 324
Query: 211 -RYDIPNHIRELIE 223
Y+ P++ LIE
Sbjct: 325 DNYNCPSYTSALIE 338
>ZFIN|ZDB-GENE-060526-371 [details] [associations]
symbol:mov10b.2 "Moloney leukemia virus 10,
homolog, b.2" species:7955 "Danio rerio" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] ZFIN:ZDB-GENE-060526-371
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0000932
GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:BX323059
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 IPI:IPI00611260
RefSeq:NP_001037805.1 UniGene:Dr.94434 ProteinModelPortal:Q1LXK5
Ensembl:ENSDART00000078491 GeneID:555950 KEGG:dre:555950 CTD:555950
InParanoid:Q1LXK5 NextBio:20881245 Uniprot:Q1LXK5
Length = 1015
Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
Identities = 202/523 (38%), Positives = 308/523 (58%)
Query: 225 KQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMR---KGLYLSLVVP 281
K + + LT NY F LL +EE Q+ D++ Y+ ++VTL R K L + L +P
Sbjct: 355 KDLQSLLQSPLTFDNYAERFDLLLYLEECQMHVDIKRYNKDSVTLHRDRDKRL-MGLNLP 413
Query: 282 GLAERRPSLVNGDFIFAKHAYEDTSS---AYQGFIHRVEADEVHLKFASDFQLN-HRDEN 337
G++E RPS++ GD + + E T S Y+G++HRVE D+V L + F + + D+
Sbjct: 414 GVSENRPSVLRGDHLLLTKSEEVTFSNVTKYKGYVHRVELDQVKLGLSKRFLKDVYIDKM 473
Query: 338 LYNVQFTYNRVNMRRLYQATD-AAQELDTEFLFPSESSGIRLIESNTLVPISCNL--NEE 394
+ V+FT NR+ +R ++A A Q + LFP S + + L L N +
Sbjct: 474 KFRVEFTVNRIPVRLQHRAVHMAVQHNLKDVLFPMASRSLNPVSPPALRLFDRKLEYNFQ 533
Query: 395 QMCSIEKILGLKGAP-PYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADH 453
Q ++ I+ P PYL++GPPGTGKT+T+VEAI Q+ DA +L CAPSNSAAD
Sbjct: 534 QYSAVCNIVAGTSKPAPYLVFGPPGTGKTVTIVEAIKQVEKNIPDAYILACAPSNSAADQ 593
Query: 454 LLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPPLAALVCYRII 513
L EK++ + V+ ++I+RL A SR +D+ C DE++ P L+ Y+I+
Sbjct: 594 LCEKLITSEHVDA--HKIYRLYASSRNQKDIPKILKDNCNVDEEMIDFPCKEDLMSYKIL 651
Query: 514 ISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDT-VVVLAGDPMQL 572
I T ++A + G HF+H F+DEAG A E E+++ ++ + +VLAGDP QL
Sbjct: 652 ICTLVTAGRLVTGGFSEDHFTHNFVDEAGHAVESETIISVAGLLNAEKGQLVLAGDPKQL 711
Query: 573 GPVIYSREAETYGMGKSYLERLF-ECEPYCHGN---EN-YVTKLVRNYRSHPQILHLPSK 627
GP++ S A +G+ S LERL + + Y G+ +N YV+KL+ NYRSHP IL +P++
Sbjct: 712 GPILRSPLAINHGLDVSLLERLMTQNDLYKRGDVEFDNRYVSKLIMNYRSHPYILEVPNR 771
Query: 628 LFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKV 685
LFY+ EL AC DE IS Y + LP+K FPV+F G+ G DERE ++PS+FN E++ +
Sbjct: 772 LFYDGELKACADE-ISSNQYCMWEHLPSKGFPVIFHGVPGKDERESNSPSFFNIYEINIL 830
Query: 686 VEIIQKLTST------GNLSEEDIGVITPYRQQVLKLNKALES 722
V+ ++KL T + +DIG+I PYR+QV K+ +A+++
Sbjct: 831 VDYLKKLLLTQPKKGISRIFPKDIGIIAPYRKQVEKIKRAIDA 873
Score = 522 (188.8 bits), Expect = 5.5e-47, P = 5.5e-47
Identities = 113/255 (44%), Positives = 164/255 (64%)
Query: 604 NENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFF 661
+ YV+KL+ NYRSHP IL +P++LFY+ EL AC DE IS Y + LP+K FPV+F
Sbjct: 748 DNRYVSKLIMNYRSHPYILEVPNRLFYDGELKACADE-ISSNQYCMWEHLPSKGFPVIFH 806
Query: 662 GIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTST------GNLSEEDIGVITPYRQQVLK 715
G+ G DERE ++PS+FN E++ +V+ ++KL T + +DIG+I PYR+QV K
Sbjct: 807 GVPGKDERESNSPSFFNIYEINILVDYLKKLLLTQPKKGISRIFPKDIGIIAPYRKQVEK 866
Query: 716 LNKALESL-----YM--PDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLS 768
+ +A+++ YM ++KVGSVE+FQGQER+VI+VSTVRS++K+ D +GFL
Sbjct: 867 IKRAIDADKDFQDYMGIDNLKVGSVEEFQGQERKVIMVSTVRSSVKYISLDETFNIGFLK 926
Query: 769 NPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPEREEFADEDP 828
N +RFNVAVTRA SLLI++GNP I+ D W + + +C + Y G ++ E D +
Sbjct: 927 NEKRFNVAVTRAKSLLIMVGNPMILRTDESWGRFIDFCLERGGYTGISITSVERIDDVES 986
Query: 829 TAAECWNHEEEIPQS 843
+EE +S
Sbjct: 987 RLLALNIQDEETEES 1001
>ZFIN|ZDB-GENE-091230-8 [details] [associations]
symbol:mov10a "Moloney leukemia virus 10, homolog, a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-091230-8
GO:GO:0005524 GO:GO:0017111 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:CU469362
IPI:IPI00481619 RefSeq:XP_002662576.2 UniGene:Dr.155704
Ensembl:ENSDART00000064826 GeneID:566858 KEGG:dre:566858 CTD:566858
NextBio:20888414 Bgee:E7FAV9 Uniprot:E7FAV9
Length = 1001
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 206/556 (37%), Positives = 316/556 (56%)
Query: 199 RYRGQIYQNRLPRYDIPN--HIRELIERK--QIPDAITDGLTLKNYTSFFKTLLIMEEIQ 254
+YR Y L +Y + + H+ +++ ++ + L +KNY+ F LL +EEIQ
Sbjct: 313 QYRYPAYLKELAKYKLEDSEHLPASLKQHLPRVRRLLDTQLCMKNYSERFHLLLHLEEIQ 372
Query: 255 LKEDMRAYDM--ENVTLMRKGLYLSLV-VPGLAERRPSLVNGDF--IFAKHAYEDTSSAY 309
++ D++ YD+ + +TL + L ++ VPG+AE RPS++ GD + + Y
Sbjct: 373 MEVDIKKYDLYGKTMTLDKTNKKLLILKVPGVAENRPSVLRGDKLNVCLSDDRNQPITVY 432
Query: 310 QGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRVNMRRLYQATD-AAQELDTEFL 368
+G++HRVE D+V L F+ + ++V+F NR +R ++A + A Q L
Sbjct: 433 EGYVHRVELDKVILGFSRKLLQKFVNNMKFDVEFNINRFPLRLQHRAVELAVQHALGNVL 492
Query: 369 FPSES-SGIRLIESNTLVPISCNLNEEQMCSIEKILGLKGAP-PYLIYGPPGTGKTMTLV 426
FPS+ +G + ++ N EQ +++ IL P PYLI+GPPGTGKT+T+V
Sbjct: 493 FPSDKDTGHSELPHLSMFNKDLENNPEQKAAVQHILSGSSRPAPYLIFGPPGTGKTVTVV 552
Query: 427 EAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNA 486
EAI Q+ ++ + +L CAPSNSA D L E++LG V + I+RL APSR V
Sbjct: 553 EAIKQVDKSKAQSHILACAPSNSACDLLCERLLGH----VDAHRIYRLCAPSRDPRTVPQ 608
Query: 487 DHIRFCFFDE--QIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQA 544
++ ++E F P L+ Y II+ T ++A + + GV GHF+HIF+DEAGQA
Sbjct: 609 KLLKHSNWNEAQDSFLLPSKETLIGYSIIVVTLVTAGRLVSGGVAMGHFTHIFIDEAGQA 668
Query: 545 SEPESMVPISSYCKK-DTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHG 603
EPE ++ I+ +VLAGDP QLGPV+ S A+ +G+G+S LERL +
Sbjct: 669 VEPECIIGIAGLLDPLKGQLVLAGDPQQLGPVLRSPLAQLHGLGQSLLERLMKRNALYQK 728
Query: 604 NEN--------YVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPN 653
+++ +VTKL+RNYRSHP IL +P++LFYE EL ++ + A+ + LP
Sbjct: 729 SQDDNSKYDSRFVTKLLRNYRSHPAILKIPNELFYENELQVFANQ-MEREAFCQWEHLPR 787
Query: 654 KEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTST-GN-----LSEEDIGVIT 707
K FPV+F G+ G DERE ++PS+FN E+ +V + L T G L DIG+I
Sbjct: 788 KGFPVVFHGVMGKDEREANSPSFFNVTEIEVIVNYLNNLMQTQGKKGLPKLGPNDIGIIA 847
Query: 708 PYRQQVLKLNKALESL 723
PYR+QV K+ KAL ++
Sbjct: 848 PYRKQVEKIRKALNTV 863
Score = 525 (189.9 bits), Expect = 2.4e-47, P = 2.4e-47
Identities = 113/236 (47%), Positives = 153/236 (64%)
Query: 604 NENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFF 661
+ +VTKL+RNYRSHP IL +P++LFYE EL ++ + A+ + LP K FPV+F
Sbjct: 737 DSRFVTKLLRNYRSHPAILKIPNELFYENELQVFANQ-MEREAFCQWEHLPRKGFPVVFH 795
Query: 662 GIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTST----G--NLSEEDIGVITPYRQQVLK 715
G+ G DERE ++PS+FN E+ +V + L T G L DIG+I PYR+QV K
Sbjct: 796 GVMGKDEREANSPSFFNVTEIEVIVNYLNNLMQTQGKKGLPKLGPNDIGIIAPYRKQVEK 855
Query: 716 LNKALESL----YMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPR 771
+ KAL ++ DIKVGSVE+FQGQER+VIIVSTVRS++ + D+ +GFLSN +
Sbjct: 856 IRKALNTVGELKKWKDIKVGSVEEFQGQERKVIIVSTVRSSVNYVKMDQDFNIGFLSNEK 915
Query: 772 RFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPEREEFADED 827
RFNVA+TRA LLI++GNP I+SKDP W + + YC Y G + E +ED
Sbjct: 916 RFNVAMTRAKGLLIVVGNPVILSKDPTWQKFIQYCEQEQGYTGFDYKDAE--GEED 969
>UNIPROTKB|Q0V8H6 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 EMBL:BT026242 EMBL:BC148151
IPI:IPI00691419 RefSeq:NP_001069307.1 UniGene:Bt.2939
ProteinModelPortal:Q0V8H6 STRING:Q0V8H6 Ensembl:ENSBTAT00000018997
GeneID:523206 KEGG:bta:523206 CTD:4343 InParanoid:Q0V8H6
OMA:VRFFKLD NextBio:20873687 Uniprot:Q0V8H6
Length = 1003
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 202/535 (37%), Positives = 303/535 (56%)
Query: 223 ERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLM-----RKGLYLS 277
E +I + L +NY + LL +EE+Q++ D+R YD+E+V + R L+
Sbjct: 319 EIAEIKAQLQTTLKWRNYEVKLRLLLHLEELQMEHDIRHYDLESVPMTWDPIDRNPRLLT 378
Query: 278 LVVPGLAERRPSLVNGDFIFA---KHAYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHR 334
L VPG+AE RPS++ GD +FA + + Y+GF+H+VE D V L F++
Sbjct: 379 LEVPGVAESRPSVLRGDHLFALLSSETHHEDPVTYKGFVHKVELDRVKLSFSTSLLSRFV 438
Query: 335 DENLYNVQFTYNRVNMRRLYQATDAAQELDTE-FLFPSESSGIRLIESNTLVPI---SCN 390
D + V FT+NR +R ++A + E LFP S G+ L+ S+ + + S
Sbjct: 439 DGLTFKVNFTFNRQPLRVQHRALELTGRWPLEPMLFPVASRGVPLLPSDVKLKLYDRSLE 498
Query: 391 LNEEQMCSIEKI-LGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
N EQ+ +++ I +G PY+I+GPPGTGKT+TLVEAI Q+ A +L CAPSNS
Sbjct: 499 SNPEQLQAMKHIVMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNS 558
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQI--FKCPPLAAL 507
AD L +++ V + + I+RL APSR V D C +D + F P L
Sbjct: 559 GADLLCQRL----RVHL-PSSIYRLLAPSRDIHLVPEDIKPCCNWDAKKGDFVFPSKKKL 613
Query: 508 VCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCK-KDT----- 561
YR++I+T ++AS + + HF+HIF+DEAG A EPES+V I+ + K+
Sbjct: 614 QEYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHAMEPESLVAIAGLMEVKEADNPGG 673
Query: 562 VVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEP-YCHG----NENYVTKLVRNYR 616
+VLAGDP QLGPV+ + +G+G S LERL Y G N ++TKL+RNYR
Sbjct: 674 QLVLAGDPRQLGPVLRCPLTQKHGLGYSLLERLLTFNALYKKGPDGYNPQFITKLLRNYR 733
Query: 617 SHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNP 674
SHP IL +P++L+Y+ EL AC D + + + LP ++FP++F G+ G DEREG++P
Sbjct: 734 SHPTILDVPNRLYYDGELQACADV-VDRERFCRWEGLPRQDFPIIFHGVMGKDEREGNSP 792
Query: 675 SWFNRIEVSKVVEIIQKLTSTGN------LSEEDIGVITPYRQQVLKLNKALESL 723
S+FN E + V +++L + + LS +GVI+PYR+QV K+ + L
Sbjct: 793 SFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKL 847
Score = 515 (186.3 bits), Expect = 3.1e-46, P = 3.1e-46
Identities = 107/233 (45%), Positives = 151/233 (64%)
Query: 604 NENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFF 661
N ++TKL+RNYRSHP IL +P++L+Y+ EL AC D + + + LP ++FP++F
Sbjct: 721 NPQFITKLLRNYRSHPTILDVPNRLYYDGELQACADV-VDRERFCRWEGLPRQDFPIIFH 779
Query: 662 GIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGN------LSEEDIGVITPYRQQV-- 713
G+ G DEREG++PS+FN E + V +++L + + LS +GVI+PYR+QV
Sbjct: 780 GVMGKDEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRSVGVISPYRKQVEK 839
Query: 714 -----LKLNKALESLY-MPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFL 767
KL+K L L + D+KVGSVE+FQGQER VI++STVRS+ D LGFL
Sbjct: 840 IRYCITKLDKQLRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFL 899
Query: 768 SNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPER 820
NP+RFNVAVTRA +LLI++GNP ++ DP W L +C +N Y GC P +
Sbjct: 900 KNPKRFNVAVTRAKALLIVVGNPLLLGHDPDWKVFLEFCKENGGYTGCPFPAK 952
>UNIPROTKB|F1SBP9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035279 "mRNA cleavage involved in gene silencing by
miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:CU861480 RefSeq:XP_003481536.1 UniGene:Ssc.19573
Ensembl:ENSSSCT00000007422 GeneID:100521086 KEGG:ssc:100521086
Uniprot:F1SBP9
Length = 1001
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 204/535 (38%), Positives = 303/535 (56%)
Query: 223 ERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLM-----RKGLYLS 277
E +I + L +NY + LL +EE+Q++ D+R YD+E+V + + L+
Sbjct: 319 EIAEIKAQLEAALKWRNYEVKLRLLLHLEELQMEHDIRHYDLESVPMTWDPIDQNPRLLT 378
Query: 278 LVVPGLAERRPSLVNGDFIFA---KHAYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHR 334
L VPG+AE RPS++ GD +FA +++ + Y+GF+HRVE D V L F++
Sbjct: 379 LEVPGVAESRPSVLRGDHLFAVLSSETHQEDAVTYKGFVHRVELDRVKLSFSASLLDRFV 438
Query: 335 DENLYNVQFTYNRVNMRRLYQATDAAQELDT-EFLFPSESSGIRLIESNTLVPI---SCN 390
D + V FT+NR +R ++A + LFP S G+ L+ S+ + + S
Sbjct: 439 DGLTFKVNFTFNRQPLRVQHRALELTGRWPLWPMLFPVASRGVPLLPSDVKLKLYDRSLE 498
Query: 391 LNEEQMCSIEKI-LGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
N EQ+ +++ I +G PY+I+GPPGTGKT+TLVEAI Q+ A +L CAPSNS
Sbjct: 499 SNPEQLQAMKHIVMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNS 558
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQI--FKCPPLAAL 507
AD L +++ V + + I+RL APSR V D C +D Q + P L
Sbjct: 559 GADLLCQRL----RVHL-PSSIYRLLAPSRDIRLVPEDIKPCCNWDAQKGDYVFPAKKKL 613
Query: 508 VCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCK-KDT----- 561
YR++I+T ++AS + + HF+HIF+DEAG + EPES+V I+ + K+
Sbjct: 614 QEYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHSMEPESLVAIAGLLEVKEADNPGG 673
Query: 562 VVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEP-YCHG----NENYVTKLVRNYR 616
+VLAGDP QLGPV+ + +G+G S LERL Y G N ++TKL+RNYR
Sbjct: 674 QLVLAGDPRQLGPVLRCPLTQKHGLGYSLLERLLTYNALYKKGPDGYNPQFITKLLRNYR 733
Query: 617 SHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNP 674
SHP IL +P++L+YE EL AC D + + + LP + FP++F G+ G DEREG++P
Sbjct: 734 SHPTILDIPNQLYYEGELQACADV-VDRERFCRWEGLPRQGFPIIFHGVMGKDEREGNSP 792
Query: 675 SWFNRIEVSKVVEII-QKLTSTGN-----LSEEDIGVITPYRQQVLKLNKALESL 723
S+FN E + V + Q LTS+ LS +GVI+PYR+QV K+ + L
Sbjct: 793 SFFNPEEAATVTSYLKQLLTSSSKKGKARLSPRSVGVISPYRKQVEKIRHCITKL 847
Score = 524 (189.5 bits), Expect = 3.1e-47, P = 3.1e-47
Identities = 119/281 (42%), Positives = 167/281 (59%)
Query: 604 NENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFF 661
N ++TKL+RNYRSHP IL +P++L+YE EL AC D + + + LP + FP++F
Sbjct: 721 NPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADV-VDRERFCRWEGLPRQGFPIIFH 779
Query: 662 GIQGCDEREGSNPSWFNRIEVSKVVEII-QKLTSTGN-----LSEEDIGVITPYRQQV-- 713
G+ G DEREG++PS+FN E + V + Q LTS+ LS +GVI+PYR+QV
Sbjct: 780 GVMGKDEREGNSPSFFNPEEAATVTSYLKQLLTSSSKKGKARLSPRSVGVISPYRKQVEK 839
Query: 714 -----LKLNKALESLY-MPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFL 767
KL+K L L + D+KVGSVE+FQGQER VI++STVRS+ D LGFL
Sbjct: 840 IRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFL 899
Query: 768 SNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPEREEFADED 827
NP+RFNVAVTRA +LLI++GNP ++ DP W L +C +N Y GC P + + +
Sbjct: 900 KNPKRFNVAVTRAKALLIVVGNPLLLGHDPDWKAFLEFCKENGGYTGCPFPAKLDL-QQG 958
Query: 828 PTAAECWNHEEEIPQSFQEDNWNQEPFQAENLKPVKDEDEW 868
+ + P + + N P + E P++ E EW
Sbjct: 959 QNLLQ--GLSKLSPSTSGPRSHNYLPQEGEGGLPLQVEPEW 997
>UNIPROTKB|F1P7T4 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:AAEX03011080 EMBL:AAEX03011081 RefSeq:XP_540337.3
Ensembl:ENSCAFT00000021339 GeneID:483219 KEGG:cfa:483219
Uniprot:F1P7T4
Length = 1003
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 200/535 (37%), Positives = 304/535 (56%)
Query: 223 ERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLM-----RKGLYLS 277
E +I + L ++Y F+ LL +EE+Q++ D+R YD+E+V + + L+
Sbjct: 319 EIAEIKAQLETALQWRSYEVKFRLLLHLEELQMEHDIRHYDLESVPMTWDPVDQNPRLLT 378
Query: 278 LVVPGLAERRPSLVNGDFIFA---KHAYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHR 334
L VPG+ E RPS++ GD +FA +++ Y+GF+H+VE D V L F++
Sbjct: 379 LEVPGVTESRPSVLRGDHLFALLSSETHQEDPVTYKGFVHKVELDRVKLSFSTSLLSRFV 438
Query: 335 DENLYNVQFTYNRVNMRRLYQATDAAQELDT-EFLFPSESSGIRLIESNTLVPI---SCN 390
D + V FT+NR +R ++A + LFP S G+ L+ S+ + + S
Sbjct: 439 DGLTFKVNFTFNRQPLRVQHRALELTGRWPLWPMLFPVASRGVPLLPSDVKLKLYDRSLE 498
Query: 391 LNEEQMCSIEKIL-GLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
N EQ+ +++ I+ G PY+I+GPPGTGKT+TLVEAI Q+ A +L CAPSNS
Sbjct: 499 SNPEQLQAMKYIIMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNS 558
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQI--FKCPPLAAL 507
AD L +++ V + + I+RL APSR V D C +D + + P L
Sbjct: 559 GADLLCQRL----RVHL-PSSIYRLLAPSRDIRMVPEDIKPCCNWDAKKGDYVFPAKKKL 613
Query: 508 VCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCK-KDT----- 561
YR++I+T ++AS + + HF+HIF+DEAG + EPES+V I+ + K+T
Sbjct: 614 QEYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHSMEPESLVAIAGLMEVKETDNPGG 673
Query: 562 VVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEP-YCHGNENY----VTKLVRNYR 616
+VLAGDP QLGPV+ S + +G+G S LERL Y G+ Y +TKL+RNYR
Sbjct: 674 QLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNALYKKGSNGYNPQFITKLLRNYR 733
Query: 617 SHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNP 674
SHP IL +P++L+YE EL AC D + + ++ LP + FP++F G+ G DEREG++P
Sbjct: 734 SHPTILDIPNQLYYEGELQACADV-VDRERFCHWEGLPRQGFPIIFHGVMGKDEREGNSP 792
Query: 675 SWFNRIEVSKVVEIIQKLTSTGN------LSEEDIGVITPYRQQVLKLNKALESL 723
S+FN E + V ++ L + + LS +GVI+PYR+QV K+ + L
Sbjct: 793 SFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRHCITKL 847
Score = 512 (185.3 bits), Expect = 6.8e-46, P = 6.8e-46
Identities = 108/233 (46%), Positives = 150/233 (64%)
Query: 604 NENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFF 661
N ++TKL+RNYRSHP IL +P++L+YE EL AC D + + ++ LP + FP++F
Sbjct: 721 NPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADV-VDRERFCHWEGLPRQGFPIIFH 779
Query: 662 GIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGN------LSEEDIGVITPYRQQV-- 713
G+ G DEREG++PS+FN E + V ++ L + + LS +GVI+PYR+QV
Sbjct: 780 GVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEK 839
Query: 714 -----LKLNKALESLY-MPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFL 767
KL+K L L + D+KVGSVE+FQGQER VI++STVRS+ D LGFL
Sbjct: 840 IRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFL 899
Query: 768 SNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPER 820
NP+RFNVAVTRA +LLI++GNP ++ DP W L +C +N Y GC P +
Sbjct: 900 KNPKRFNVAVTRAKALLIVVGNPLLLGHDPDWKVFLEFCKENGGYTGCPFPAK 952
>UNIPROTKB|J9P7Z9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:AAEX03011080 EMBL:AAEX03011081
Ensembl:ENSCAFT00000044224 Uniprot:J9P7Z9
Length = 983
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 200/535 (37%), Positives = 304/535 (56%)
Query: 223 ERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLM-----RKGLYLS 277
E +I + L ++Y F+ LL +EE+Q++ D+R YD+E+V + + L+
Sbjct: 299 EIAEIKAQLETALQWRSYEVKFRLLLHLEELQMEHDIRHYDLESVPMTWDPVDQNPRLLT 358
Query: 278 LVVPGLAERRPSLVNGDFIFA---KHAYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHR 334
L VPG+ E RPS++ GD +FA +++ Y+GF+H+VE D V L F++
Sbjct: 359 LEVPGVTESRPSVLRGDHLFALLSSETHQEDPVTYKGFVHKVELDRVKLSFSTSLLSRFV 418
Query: 335 DENLYNVQFTYNRVNMRRLYQATDAAQELDT-EFLFPSESSGIRLIESNTLVPI---SCN 390
D + V FT+NR +R ++A + LFP S G+ L+ S+ + + S
Sbjct: 419 DGLTFKVNFTFNRQPLRVQHRALELTGRWPLWPMLFPVASRGVPLLPSDVKLKLYDRSLE 478
Query: 391 LNEEQMCSIEKIL-GLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
N EQ+ +++ I+ G PY+I+GPPGTGKT+TLVEAI Q+ A +L CAPSNS
Sbjct: 479 SNPEQLQAMKYIIMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNS 538
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQI--FKCPPLAAL 507
AD L +++ V + + I+RL APSR V D C +D + + P L
Sbjct: 539 GADLLCQRL----RVHL-PSSIYRLLAPSRDIRMVPEDIKPCCNWDAKKGDYVFPAKKKL 593
Query: 508 VCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCK-KDT----- 561
YR++I+T ++AS + + HF+HIF+DEAG + EPES+V I+ + K+T
Sbjct: 594 QEYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHSMEPESLVAIAGLMEVKETDNPGG 653
Query: 562 VVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEP-YCHGNENY----VTKLVRNYR 616
+VLAGDP QLGPV+ S + +G+G S LERL Y G+ Y +TKL+RNYR
Sbjct: 654 QLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNALYKKGSNGYNPQFITKLLRNYR 713
Query: 617 SHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNP 674
SHP IL +P++L+YE EL AC D + + ++ LP + FP++F G+ G DEREG++P
Sbjct: 714 SHPTILDIPNQLYYEGELQACADV-VDRERFCHWEGLPRQGFPIIFHGVMGKDEREGNSP 772
Query: 675 SWFNRIEVSKVVEIIQKLTSTGN------LSEEDIGVITPYRQQVLKLNKALESL 723
S+FN E + V ++ L + + LS +GVI+PYR+QV K+ + L
Sbjct: 773 SFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRHCITKL 827
Score = 512 (185.3 bits), Expect = 6.3e-46, P = 6.3e-46
Identities = 108/233 (46%), Positives = 150/233 (64%)
Query: 604 NENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFF 661
N ++TKL+RNYRSHP IL +P++L+YE EL AC D + + ++ LP + FP++F
Sbjct: 701 NPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADV-VDRERFCHWEGLPRQGFPIIFH 759
Query: 662 GIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGN------LSEEDIGVITPYRQQV-- 713
G+ G DEREG++PS+FN E + V ++ L + + LS +GVI+PYR+QV
Sbjct: 760 GVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEK 819
Query: 714 -----LKLNKALESLY-MPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFL 767
KL+K L L + D+KVGSVE+FQGQER VI++STVRS+ D LGFL
Sbjct: 820 IRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFL 879
Query: 768 SNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPER 820
NP+RFNVAVTRA +LLI++GNP ++ DP W L +C +N Y GC P +
Sbjct: 880 KNPKRFNVAVTRAKALLIVVGNPLLLGHDPDWKVFLEFCKENGGYTGCPFPAK 932
>MGI|MGI:97054 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISO] InterPro:IPR003593 SMART:SM00382
MGI:MGI:97054 GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
HOVERGEN:HBG052500 EMBL:X52574 EMBL:AK004542 EMBL:BC053743
EMBL:X75819 IPI:IPI00130328 PIR:A39611 RefSeq:NP_001156912.1
RefSeq:NP_001156913.1 RefSeq:NP_032645.2 UniGene:Mm.1597
ProteinModelPortal:P23249 SMR:P23249 DIP:DIP-48575N STRING:P23249
PhosphoSite:P23249 PaxDb:P23249 PRIDE:P23249
Ensembl:ENSMUST00000168015 GeneID:17454 KEGG:mmu:17454
NextBio:292100 Bgee:P23249 Genevestigator:P23249
GermOnline:ENSMUSG00000002227 Uniprot:P23249
Length = 1004
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 202/535 (37%), Positives = 302/535 (56%)
Query: 223 ERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLM-----RKGLYLS 277
E +I + L +NY + LL +EE+Q++ D+R YD+++V + + L+
Sbjct: 320 EVAEIKAQLETTLKSRNYEVKLRLLLHLEELQMEHDIRHYDLDSVPMTWDPVDQNPRLLT 379
Query: 278 LVVPGLAERRPSLVNGDFIFA---KHAYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHR 334
L VPG+AE RPS++ GD +FA +D Y+GF+H+VE D V L F++
Sbjct: 380 LEVPGVAESRPSVLRGDHLFALLSSETQQDDPVTYKGFVHKVELDRVKLSFSTSLLSRFV 439
Query: 335 DENLYNVQFTYNRVNMRRLYQATD-AAQELDTEFLFPSESSGIRLIESNT---LVPISCN 390
D + V FT+NR +R ++A + + + LFP S G+ L+ S+ L S
Sbjct: 440 DGLTFKVNFTFNRQPLRVQHRALELTGRWVLWPMLFPVASRGVSLLPSDVKFKLYDRSLE 499
Query: 391 LNEEQMCSIEKIL-GLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
N EQ+ +++ I+ G PY+I+GPPGTGKT+TLVEAI Q+ A +L CAPSNS
Sbjct: 500 SNPEQLQAMKHIVRGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNS 559
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQI--FKCPPLAAL 507
AD L +++ V + + I+RL APSR V D C +D + + P L
Sbjct: 560 GADLLCQRL----RVHL-PSSIYRLLAPSRDIRMVPEDIKTCCNWDAKKGEYVYPAKKHL 614
Query: 508 VCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCK-KDT----- 561
YR++I+T ++AS + + HF+HIF+DEAG EPES+V I+ K+T
Sbjct: 615 QQYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMDVKETGNPGG 674
Query: 562 VVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEP-YCHGNENY----VTKLVRNYR 616
+VLAGDP QLGPV+ S A +G+G S LERL Y G Y +TKL+RNYR
Sbjct: 675 QLVLAGDPRQLGPVLRSPLALKHGLGYSLLERLLAYNSLYKKGPNGYDPQFITKLLRNYR 734
Query: 617 SHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNP 674
SHP IL +P++L+Y+ EL AC D + + + LP + FP++F G+ G DEREG++P
Sbjct: 735 SHPTILDIPNQLYYDGELQACADV-VDRERFCRWEGLPQQGFPIIFHGVMGKDEREGNSP 793
Query: 675 SWFNRIEVSKVVEIIQKLTSTGN------LSEEDIGVITPYRQQVLKLNKALESL 723
S+FN E + V +++L + + LS ++GVI+PYR+QV K+ + L
Sbjct: 794 SFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRNVGVISPYRKQVEKIRYCITKL 848
Score = 508 (183.9 bits), Expect = 1.9e-45, P = 1.9e-45
Identities = 113/278 (40%), Positives = 163/278 (58%)
Query: 607 YVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQ 664
++TKL+RNYRSHP IL +P++L+Y+ EL AC D + + + LP + FP++F G+
Sbjct: 725 FITKLLRNYRSHPTILDIPNQLYYDGELQACADV-VDRERFCRWEGLPQQGFPIIFHGVM 783
Query: 665 GCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGN------LSEEDIGVITPYRQQV----- 713
G DEREG++PS+FN E + V +++L + + LS ++GVI+PYR+QV
Sbjct: 784 GKDEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRNVGVISPYRKQVEKIRY 843
Query: 714 --LKLNKALESLY-MPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNP 770
KL++ L L + D+KVGSVE+FQGQER VI++STVRS+ D LGFL NP
Sbjct: 844 CITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNP 903
Query: 771 RRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPEREEFADEDPTA 830
+RFNVAVTRA +LLI++GNP ++ DP W L +C +N Y GC P + +
Sbjct: 904 KRFNVAVTRAKALLIVVGNPLLLGHDPDWKTFLEFCKENGGYTGCPFPAKLDLQQGQDLL 963
Query: 831 AECWNHEEEIPQSFQEDNWNQEPFQAENLKPVKDEDEW 868
+ N QE + E P++ E EW
Sbjct: 964 QGLSKLSPSTSGPRRHQNLPQER-EGEGGLPLQVEPEW 1000
>RGD|1598327 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA;ISO] InterPro:IPR003593 SMART:SM00382
RGD:1598327 GO:GO:0005524 GO:GO:0017111 GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:CH474015 OrthoDB:EOG4SXNC4
CTD:4343 IPI:IPI00192859 RefSeq:NP_001101181.1 UniGene:Rn.3508
Ensembl:ENSRNOT00000018061 GeneID:310756 KEGG:rno:310756
UCSC:RGD:1598327 NextBio:662562 Uniprot:D3ZUC2
Length = 1004
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 200/535 (37%), Positives = 299/535 (55%)
Query: 223 ERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLM-----RKGLYLS 277
E +I + L +NY + LL +EE+Q++ D+R YD+E+V + + L+
Sbjct: 320 EVAEIKAQLETTLKSRNYEVKLRLLLHLEELQMEHDIRHYDLESVPMTWDPVDQNPRLLT 379
Query: 278 LVVPGLAERRPSLVNGDFIFA---KHAYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHR 334
L VPG+ E RPS++ GD +FA ++ Y+GF+H+VE D V L F+
Sbjct: 380 LEVPGVTESRPSVLRGDHLFALLSSEIQQEDPVTYKGFVHKVELDRVKLSFSPSLLSRFV 439
Query: 335 DENLYNVQFTYNRVNMRRLYQATD-AAQELDTEFLFPSESSGIRLIESNT---LVPISCN 390
D + V FT+NR +R ++A + + + LFP S G+ L+ S+ L S
Sbjct: 440 DGLTFKVNFTFNRQPLRVQHRALELTGRWVLWPTLFPVASRGVSLLPSDVKFKLYDRSLE 499
Query: 391 LNEEQMCSIEKIL-GLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
N EQ+ +++ I+ G PY+I+GPPGTGKT+TLVEAI Q+ A +L C PSNS
Sbjct: 500 SNPEQLQAMKHIVRGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACTPSNS 559
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQI--FKCPPLAAL 507
AD L +++ V + + I+RL APSR V D C +D + + P L
Sbjct: 560 GADLLCQRL----RVHL-PSSIYRLLAPSRDIRMVPEDIKTCCNWDPKKGEYVYPAKKHL 614
Query: 508 VCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCK-KDT----- 561
YR++I+T ++AS + + HF+HIF+DEAG EPES+V I+ K+T
Sbjct: 615 QQYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMDVKETGNPGG 674
Query: 562 VVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEP-YCHGNENY----VTKLVRNYR 616
+VLAGDP QLGPV+ S A+ +G+G S LERL Y G Y +TKL+RNYR
Sbjct: 675 QLVLAGDPRQLGPVLRSPLAQKHGLGYSLLERLLTYNSLYKKGPNGYDPQFITKLLRNYR 734
Query: 617 SHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGSNP 674
SHP IL +P++L+Y+ EL AC D + + + LP + FP++F G+ G DEREG++P
Sbjct: 735 SHPTILDIPNQLYYDGELQACADV-VDRERFCRWEGLPQQGFPIIFHGVMGKDEREGNSP 793
Query: 675 SWFNRIEVSKVVEIIQKLTSTGN------LSEEDIGVITPYRQQVLKLNKALESL 723
S+FN E + V +++L + + LS +GVI+PYR+QV K+ + L
Sbjct: 794 SFFNPEEAATVTSYLRQLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKL 848
Score = 504 (182.5 bits), Expect = 3.3e-44, Sum P(2) = 3.3e-44
Identities = 105/230 (45%), Positives = 149/230 (64%)
Query: 607 YVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQ 664
++TKL+RNYRSHP IL +P++L+Y+ EL AC D + + + LP + FP++F G+
Sbjct: 725 FITKLLRNYRSHPTILDIPNQLYYDGELQACADV-VDRERFCRWEGLPQQGFPIIFHGVM 783
Query: 665 GCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGN------LSEEDIGVITPYRQQV----- 713
G DEREG++PS+FN E + V +++L + + LS +GVI+PYR+QV
Sbjct: 784 GKDEREGNSPSFFNPEEAATVTSYLRQLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRY 843
Query: 714 --LKLNKALESLY-MPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNP 770
KL++ L L + D+KVGSVE+FQGQER VI++STVRS+ D LGFL NP
Sbjct: 844 CITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNP 903
Query: 771 RRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPER 820
+RFNVAVTRA +LLI++GNP ++ DP W L +C +N Y GC P +
Sbjct: 904 KRFNVAVTRAKALLIVVGNPLLLGHDPDWKTFLEFCKENGGYTGCPFPAK 953
Score = 40 (19.1 bits), Expect = 3.3e-44, Sum P(2) = 3.3e-44
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 17 RDIGFIDFEDYKSECSYNPSEEDPV 41
RDI + ED K+ C+++P + + V
Sbjct: 584 RDIRMVP-EDIKTCCNWDPKKGEYV 607
>UNIPROTKB|Q9HCE1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0007219 GO:GO:0006351
GO:GO:0003723 GO:GO:0004386 GO:GO:0000932 GO:GO:0035279
eggNOG:COG1112 InterPro:IPR026122 PANTHER:PTHR10887:SF17
EMBL:AL603832 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 CTD:4343
OMA:VRFFKLD EMBL:AB046851 EMBL:AK074174 EMBL:AL833353 EMBL:BC002548
EMBL:BC004499 EMBL:BC009312 IPI:IPI00444452 IPI:IPI00444454
IPI:IPI00929442 RefSeq:NP_001123551.1 RefSeq:NP_066014.1
UniGene:Hs.514941 ProteinModelPortal:Q9HCE1 SMR:Q9HCE1
DIP:DIP-44158N IntAct:Q9HCE1 STRING:Q9HCE1 PhosphoSite:Q9HCE1
DMDM:24638063 PaxDb:Q9HCE1 PRIDE:Q9HCE1 DNASU:4343
Ensembl:ENST00000357443 Ensembl:ENST00000369645
Ensembl:ENST00000413052 Ensembl:ENST00000544796 GeneID:4343
KEGG:hsa:4343 UCSC:uc001eck.3 GeneCards:GC01P113215 HGNC:HGNC:7200
MIM:610742 neXtProt:NX_Q9HCE1 PharmGKB:PA30908 HOVERGEN:HBG052500
InParanoid:Q9HCE1 PhylomeDB:Q9HCE1 ChiTaRS:MOV10 GenomeRNAi:4343
NextBio:17098 ArrayExpress:Q9HCE1 Bgee:Q9HCE1 CleanEx:HS_MOV10
Genevestigator:Q9HCE1 GermOnline:ENSG00000155363 Uniprot:Q9HCE1
Length = 1003
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 200/537 (37%), Positives = 299/537 (55%)
Query: 223 ERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLM-----RKGLYLS 277
E +I + L +NY + LL +EE+Q++ D+R YD+E+V + + L+
Sbjct: 319 EIAEIKAQLETALKWRNYEVKLRLLLHLEELQMEHDIRHYDLESVPMTWDPVDQNPRLLT 378
Query: 278 LVVPGLAERRPSLVNGDFIFA---KHAYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHR 334
L VPG+ E RPS++ GD +FA +++ Y+GF+H+VE D V L F+
Sbjct: 379 LEVPGVTESRPSVLRGDHLFALLSSETHQEDPITYKGFVHKVELDRVKLSFSMSLLSRFV 438
Query: 335 DENLYNVQFTYNRVNMRRLYQATD-AAQELDTEFLFPSESSGIRLIESNTLVPI---SCN 390
D + V FT+NR +R ++A + + L LFP + L+ S+ + + S
Sbjct: 439 DGLTFKVNFTFNRQPLRVQHRALELTGRWLLWPMLFPVAPRDVPLLPSDVKLKLYDRSLE 498
Query: 391 LNEEQMCSIEKIL-GLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
N EQ+ ++ I+ G PY+I+GPPGTGKT+TLVEAI Q+ A +L CAPSNS
Sbjct: 499 SNPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNS 558
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFD----EQIFKCPPLA 505
AD L +++ V + + I+RL APSR V D C +D E +F P
Sbjct: 559 GADLLCQRL----RVHL-PSSIYRLLAPSRDIRMVPEDIKPCCNWDAKKGEYVF--PAKK 611
Query: 506 ALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCK-KDT--- 561
L YR++I+T ++A + + HF+HIF+DEAG EPES+V I+ + K+T
Sbjct: 612 KLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGDP 671
Query: 562 --VVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEP-YCHGNENY----VTKLVRN 614
+VLAGDP QLGPV+ S + +G+G S LERL Y G + Y +TKL+RN
Sbjct: 672 GGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLLRN 731
Query: 615 YRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQGCDEREGS 672
YRSHP IL +P++L+YE EL AC D + + + LP + FP++F G+ G DEREG+
Sbjct: 732 YRSHPTILDIPNQLYYEGELQACADV-VDRERFCRWAGLPRQGFPIIFHGVMGKDEREGN 790
Query: 673 NPSWFNRIEVSKVVEIIQKLTSTGN------LSEEDIGVITPYRQQVLKLNKALESL 723
+PS+FN E + V ++ L + + LS +GVI+PYR+QV K+ + L
Sbjct: 791 SPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKL 847
Score = 504 (182.5 bits), Expect = 5.2e-45, P = 5.2e-45
Identities = 107/230 (46%), Positives = 148/230 (64%)
Query: 607 YVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF--LPNKEFPVLFFGIQ 664
++TKL+RNYRSHP IL +P++L+YE EL AC D + + + LP + FP++F G+
Sbjct: 724 FITKLLRNYRSHPTILDIPNQLYYEGELQACADV-VDRERFCRWAGLPRQGFPIIFHGVM 782
Query: 665 GCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGN------LSEEDIGVITPYRQQV----- 713
G DEREG++PS+FN E + V ++ L + + LS +GVI+PYR+QV
Sbjct: 783 GKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRY 842
Query: 714 --LKLNKALESLY-MPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNP 770
KL++ L L + D+KVGSVE+FQGQER VI++STVRS+ D LGFL NP
Sbjct: 843 CITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNP 902
Query: 771 RRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPER 820
+RFNVAVTRA +LLII+GNP ++ DP W L +C +N Y GC P +
Sbjct: 903 KRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKENGGYTGCPFPAK 952
>FB|FBgn0033889 [details] [associations]
symbol:CG6701 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
FlyBase:FBgn0033889 ChiTaRS:CG6701 EMBL:AY128442
ProteinModelPortal:Q8MQQ9 STRING:Q8MQQ9 PRIDE:Q8MQQ9
InParanoid:Q8MQQ9 ArrayExpress:Q8MQQ9 Bgee:Q8MQQ9 Uniprot:Q8MQQ9
Length = 1261
Score = 615 (221.5 bits), Expect = 2.1e-57, Sum P(2) = 2.1e-57
Identities = 173/518 (33%), Positives = 274/518 (52%)
Query: 335 DENLYNVQFTYNRVNMRRLYQATDA---AQELDTE-FLFPSE------SSGIRLIESNTL 384
D Y + F R MR Y+A + D + LFP E +SG+ + +N L
Sbjct: 479 DNTTYTLIFRPLRAVMRYQYRALQQLSFTRHSDVQRILFPGEIPNTPLASGVLQL-NNKL 537
Query: 385 VPISCNLNEEQMCSIEKI-LGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLV 443
+ + N EQM ++ +I L + PY+++GPPGTGKT T+VEAI QLY R + +LV
Sbjct: 538 I----STNPEQMQAVRQIALSPRLKAPYIVFGPPGTGKTSTIVEAIYQLYINRPETHILV 593
Query: 444 CAPSNSAADHLLEKILGE--KAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQ-IFK 500
A SN+A D + ++L KA + + + R+ + + N D + + + +
Sbjct: 594 LAGSNTACDEVALRLLRAIAKAPQSQPRPLTRIFSANCDRRIDNIDDLLLEYSNMYTVHF 653
Query: 501 CPPLAALVCYRIIISTYMSASLIYAEGVDRGH-FSHIFLDEAGQASEPESMVPISSYCKK 559
P + A+ YRI+I T A + G + ++H+F+DEA ++E E ++ I+
Sbjct: 654 YPAVQAVHQYRIVICTLSLAGKLSTGGFAANNVYTHVFVDEAAASTEAEVLMGITCTLSP 713
Query: 560 DTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYC---HG--NENYVTKLVRN 614
++L+GD QLGPV+ S+ A +G+G + ERL + + Y G N + T+L+RN
Sbjct: 714 TLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLLQRKCYQVEEDGSYNASVQTRLIRN 773
Query: 615 YRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF-LPNKEFPVLFFGIQGCDEREGSN 673
+RSHP+I+ L + ++YE L I C + F LPN FP++F + G S+
Sbjct: 774 FRSHPEIVSLYNNMYYEGHLRTEAPMEIVCRFHNWFYLPNATFPIMFHSVFGTTMNTKSS 833
Query: 674 PSWFNRIEVSKVVEIIQKLTSTG----NLSEEDIGVITPYRQQVLKLNKALESLYMPDIK 729
S N E+ V++ ++ L G L + DIG+I+PY+ Q ++ + L I
Sbjct: 834 VSLCNNKEIDVVMDYVKDLMYFGLNGEKLLQTDIGIISPYKNQYQRIQEQLNMRNWSQID 893
Query: 730 VGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGN 789
GSVE FQG+E+ VIIVS VRS F K LGFL+N RR NV ++R ISLLI+IGN
Sbjct: 894 CGSVELFQGKEKHVIIVSFVRS------FTPK--LGFLNNERRLNVLLSRPISLLILIGN 945
Query: 790 PHIVSKDPYWHQLLWYCSDNNSYQGCALPEREEFADED 827
P +S++ + ++ C + + G E++ +ED
Sbjct: 946 PRTLSQNSDFQHIIEMCRNRKTLVG------EQYLNED 977
Score = 44 (20.5 bits), Expect = 2.1e-57, Sum P(2) = 2.1e-57
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 235 LTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSL 278
+T +N T +TLL +E+I+ + + + L + G LS+
Sbjct: 338 ITQENLTGTLRTLLQVEDIERLQHYLSLKQSEMELHQFGRELSV 381
>FB|FBgn0041164 [details] [associations]
symbol:armi "armitage" species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS;IMP] [GO:0007319 "negative
regulation of oskar mRNA translation" evidence=IMP] [GO:0000578
"embryonic axis specification" evidence=NAS;IMP] [GO:0016325
"oocyte microtubule cytoskeleton organization" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007317 "regulation of
pole plasm oskar mRNA localization" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0003678 "DNA helicase activity"
evidence=NAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007318 "pole plasm protein
localization" evidence=IMP] [GO:0070725 "Yb body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005524
GO:GO:0005737 EMBL:AE014296 GO:GO:0016246 GO:GO:0000184
GO:GO:0030424 GO:GO:0043025 GO:GO:0030425 GO:GO:0007616
GO:GO:0045202 GO:GO:0007318 eggNOG:COG1112 EMBL:AY598469
RefSeq:NP_001014556.1 RefSeq:NP_647816.2 ProteinModelPortal:Q6J5K9
SMR:Q6J5K9 IntAct:Q6J5K9 STRING:Q6J5K9 PaxDb:Q6J5K9 GeneID:38427
KEGG:dme:Dmel_CG11513 UCSC:CG11513-RA CTD:38427 FlyBase:FBgn0041164
InParanoid:Q6J5K9 OMA:ITISTCT OrthoDB:EOG4DZ094 PhylomeDB:Q6J5K9
GenomeRNAi:38427 NextBio:808602 Bgee:Q6J5K9 GermOnline:CG11513
GO:GO:0070725 GO:GO:0003678 GO:GO:0046843 GO:GO:0031023
InterPro:IPR026122 PANTHER:PTHR10887:SF17 Uniprot:Q6J5K9
Length = 1274
Score = 412 (150.1 bits), Expect = 1.9e-54, Sum P(2) = 1.9e-54
Identities = 101/255 (39%), Positives = 146/255 (57%)
Query: 591 LERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLN- 649
L+R E Y N +TKL+ NYR+ P I+ + S+LFY++ELI E S + L
Sbjct: 1013 LQRFPESSGY---NPLVLTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESRLLS 1069
Query: 650 -----FLPNKEFP----VLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSE 700
F K+ P F+GI G + + +PSWFN EV +V + L N++
Sbjct: 1070 KLRCVFESEKDIPQAHGTFFYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYRA-NVTA 1128
Query: 701 EDIGVITPYRQQVLKLNKAL--ESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDF 758
+ IG+ITPY++QV L + MP K+GSVE+FQGQER +I++STVRS+ +
Sbjct: 1129 DQIGIITPYQKQVKMLRSMFIGTDVVMP--KIGSVEEFQGQERDIILISTVRSSEEILRM 1186
Query: 759 DRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALP 818
D + LGF+ +R NVAV+RA +++II GNPH+++ D W QL+ +C NN+Y GC LP
Sbjct: 1187 DARFSLGFVRCSKRLNVAVSRARAMMIIFGNPHLLAVDECWRQLILFCVKNNAYFGCDLP 1246
Query: 819 ERE-EFADEDPTAAE 832
+ DE P E
Sbjct: 1247 QMVINQKDEVPVCLE 1261
Score = 376 (137.4 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 109/282 (38%), Positives = 150/282 (53%)
Query: 390 NLNEEQMCSIEKIL-GLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSN 448
+LN Q ++ IL G PY+++GPPG+GKTMTL+E +LQL AR+LV PSN
Sbjct: 783 SLNSIQKRAVFNILRGEAENIPYVLFGPPGSGKTMTLIETLLQLVRNLPGARILVGTPSN 842
Query: 449 SAADHLLEKILGEKAVE-------VRENEIFR-LNAPS-RPY---EDVNADHIRFC---- 492
S+AD + ++++ KA+ V N++ + L P Y DV A + C
Sbjct: 843 SSADLVTKRLIDSKALLQGDFIRLVSYNQVEKDLIPPEIMSYCATSDVGA--VGSCEDKM 900
Query: 493 FFDEQIFKCPPLAALV-CYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMV 551
E K A + +RI IST + G GHF+H+ DEAGQ +EPE+MV
Sbjct: 901 MVTESGLKLRCQAKFIGTHRITISTCTTLGNFLQLGFPAGHFTHVLFDEAGQCTEPETMV 960
Query: 552 PISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPY---------CH 602
PI KK + VVL+GDP QL ++ SR A G S+LERL E PY
Sbjct: 961 PIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERLLERSPYRKDLQRFPESS 1020
Query: 603 G-NENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESIS 643
G N +TKL+ NYR+ P I+ + S+LFY++ELI E S
Sbjct: 1021 GYNPLVLTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDS 1062
Score = 240 (89.5 bits), Expect = 1.9e-54, Sum P(2) = 1.9e-54
Identities = 62/181 (34%), Positives = 103/181 (56%)
Query: 208 RLPRYDIPNHIRELI---ERKQ-IPDAI-------TDGLTLKNYTSFFKTLLIMEEIQLK 256
RL +++P +R++ ER+Q + AI T+ L++K Y F+ LL +EEI+
Sbjct: 573 RLGCFEVPKELRQICLTSERRQEMIKAIEQHYSFLTEPLSIKTYMHRFRLLLHLEEIECF 632
Query: 257 EDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIFAKHAYED----TSSAYQGF 312
+ R YD + +R G +L+L + LAERRPSLV GD + + + D T+ +Y+G
Sbjct: 633 VNFRNYDRDRAHFLRDGEFLTLQIENLAERRPSLVIGDTLRVINPWSDPDSQTTKSYEGI 692
Query: 313 IHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRVNMRRLYQA-TDAAQELDTEFLFPS 371
IH+V D + LKF S FQ + E+ Y ++F ++R + R+ + A + + +FLFPS
Sbjct: 693 IHKVLFDRILLKFHSSFQEKYNGED-YRLEFYFSRYSFRKQHHAISKIVGVMGEDFLFPS 751
Query: 372 E 372
+
Sbjct: 752 K 752
Score = 37 (18.1 bits), Expect = 4.1e-33, Sum P(2) = 4.1e-33
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 451 ADHLLEKILGEKAVEVRENEIFRL 474
A+ E G KA E EN + RL
Sbjct: 43 AESQSETTEGGKAAETTENHLKRL 66
>FB|FBgn0034187 [details] [associations]
symbol:CG6967 species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS] UCSC:CG6967-RC
FlyBase:FBgn0034187 NextBio:801049 EMBL:AY119610
ProteinModelPortal:Q8MRI1 PRIDE:Q8MRI1 InParanoid:Q8MRI1
PhylomeDB:Q8MRI1 ArrayExpress:Q8MRI1 Bgee:Q8MRI1 Uniprot:Q8MRI1
Length = 825
Score = 474 (171.9 bits), Expect = 4.3e-54, Sum P(2) = 4.3e-54
Identities = 110/314 (35%), Positives = 183/314 (58%)
Query: 507 LVCYRIIISTYMSASLIYAEGVDR-GHFSHIFLDEAGQASEPESMVPISSYCKK-DTVVV 564
+V Y II++T + + + + + R F+HIF+DEAG ++EPE+++ I + D V+
Sbjct: 444 IVKYGIIVATLCTVARLVTDTLGRYNFFTHIFIDEAGASTEPEALIGIMGIKQTADCHVI 503
Query: 565 LAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYC---HGN--ENYVTKLVRNYRSHP 619
L+GD QLG VI S A + G+ +S +ERL + + Y +GN N +L RNYRSHP
Sbjct: 504 LSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSDENGNYDRNRQMRLCRNYRSHP 563
Query: 620 QILHLPSKLFYEEELIA-CKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFN 678
QI+ L ++L+Y EL A ++ A + L N +FP++F G RE ++ S +N
Sbjct: 564 QIVRLFNELYYNGELKAQAPAMDVNLAANWSVLTNPQFPIIFQATHGVTNREQNSTSSYN 623
Query: 679 RIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQG 738
+E + +++L + + +ED+G++ PY Q + K L+S P+++VGSVE +QG
Sbjct: 624 NLEAEVICWYVKRLINDRVVGQEDVGIVAPYTAQGKLVTKLLQSKGYPNVEVGSVETYQG 683
Query: 739 QERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPY 798
+E+ +II S V+S F +GF+ NPRR NV ++RA +LLI++GNP +
Sbjct: 684 REKTIIIASLVKS------FTN---MGFMCNPRRVNVLLSRAKALLILVGNPVTLRHHSD 734
Query: 799 WHQLLWYCSDNNSY 812
+ ++ C + +Y
Sbjct: 735 FKFVINECKKHGTY 748
Score = 161 (61.7 bits), Expect = 4.3e-54, Sum P(2) = 4.3e-54
Identities = 36/82 (43%), Positives = 52/82 (63%)
Query: 392 NEEQMCSIEKIL-GLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSA 450
N EQ+ ++++I+ G PY+++GPPGTGKT T+VEAILQL + +R+LV A SNSA
Sbjct: 312 NAEQLEAVQRIVAGPSTQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSA 371
Query: 451 ADHLLEKILGEKAVEVRENEIF 472
D + K+ +R E F
Sbjct: 372 CDTIALKLCEYIESNIRLQEHF 393
>UNIPROTKB|E2R8C1 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:AAEX03006372 EMBL:AAEX03006373 EMBL:AAEX03006374
RefSeq:XP_862371.2 Ensembl:ENSCAFT00000018141 GeneID:490907
KEGG:cfa:490907 Uniprot:E2R8C1
Length = 1944
Score = 513 (185.6 bits), Expect = 3.4e-52, Sum P(3) = 3.4e-52
Identities = 160/515 (31%), Positives = 263/515 (51%)
Query: 309 YQGFIHRVEADEVHLKFASDF--QLNHR-DENLY-NVQFTYNRVNMRRLYQATDAAQELD 364
Y+ I + + L+ + + +LN R D ++ +QF NR+ + ++ A D + D
Sbjct: 555 YEATIEEKTKEYIFLRISRECCEELNLRPDYDIQVELQFQLNRLPLCEMHYALDRIK--D 612
Query: 365 TEFLFPSESSGIRLIESNTLV---PISCNLNEEQ---MCSIEKILGLKGAPPYLIYGPPG 418
LFP + + S + LN +Q + +I L ++ PP LI GP G
Sbjct: 613 NGVLFPDTTMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ-LPPVLIIGPYG 671
Query: 419 TGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI--FRLNA 476
TGKT TL +A+ + +E R+L+C SNSAAD ++ L VE + R+
Sbjct: 672 TGKTFTLAQAVKHILQQQE-TRILICTHSNSAADLYIKDYL-HPYVEAGNPQARPLRVYF 729
Query: 477 PSRPYEDVNADHIRFCFFDE--QIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFS 534
+R + V+ ++C F+ P ++ +R+++ T ++ + ++ G F+
Sbjct: 730 RNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFT 789
Query: 535 HIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERL 594
HI LDEA QA E E+++P++ K+T +VLAGD MQL P +YS A + S L+RL
Sbjct: 790 HILLDEAAQAMECETIMPLA-LATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL 848
Query: 595 FECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNK 654
+E P L NYRSH I++ S+LFYE +L+A + A+ +F
Sbjct: 849 YEHYP---AEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQP----AHKDF---- 897
Query: 655 EFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKL-----TSTGNLSEEDIGVITPY 709
+P+ FF +G D +E ++ +++N EV +VVE +++L + G L + IGV+TPY
Sbjct: 898 -YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPY 956
Query: 710 RQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRS--TIKHND--FDRKHCL- 764
QV ++ L + D+ V V QG++ +V+ +STVR+ T KH +K L
Sbjct: 957 ADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLL 1016
Query: 765 ---------GFLSNPRRFNVAVTRAISLLIIIGNP 790
GFLSN + N A+TRA SL+ ++G+P
Sbjct: 1017 EDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDP 1051
Score = 101 (40.6 bits), Expect = 3.4e-52, Sum P(3) = 3.4e-52
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 765 GFLSNPRRFNVAVTRAISLLIIIGNPHIVSK----DPYWHQLLWYCSDNNSYQG 814
GFLSN + N A+TRA SL+ ++G+P + +W + + C DNNS G
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHDNNSLHG 1079
Score = 64 (27.6 bits), Expect = 3.4e-52, Sum P(3) = 3.4e-52
Identities = 36/163 (22%), Positives = 65/163 (39%)
Query: 144 TTVLQFDVEDRI-ERVVFLLAEDKISQSLASKRPYSRGGRKKQFSVDKYVVGSRPARYRG 202
T V F +E + +RV+ A + + L + K+ S K ++ P
Sbjct: 364 TIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNETT- 422
Query: 203 QIYQNRLPRYDIPNHIRELIERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAY 262
+ ++ L RY IP +L + + LT NY S LL +EEI +++ +
Sbjct: 423 DLEKSLLIRYQIPLSADQLFTQS----VLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKF 478
Query: 263 DMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIFAKHAYEDT 305
+++ + L+ V G + + G F + EDT
Sbjct: 479 NLKVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDT 521
Score = 61 (26.5 bits), Expect = 7.1e-52, Sum P(3) = 7.1e-52
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 127 QTLTIWLSCKPKGIGLHTTVLQFDVEDRIERVVFLLAED---KISQSLASKRPYSRGGRK 183
QT T L+CKP + L+ L +D ++ + A D ++SQ + GG+
Sbjct: 279 QTWTFALTCKPARM-LYRVALLYDAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKM 337
Query: 184 KQFSVDKYV 192
Q +D YV
Sbjct: 338 AQNGLDHYV 346
>UNIPROTKB|F1RSM3 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:CU466377 EMBL:CU639426 EMBL:CU929837 RefSeq:XP_003131321.1
UniGene:Ssc.13421 Ensembl:ENSSSCT00000018802 GeneID:100524104
KEGG:ssc:100524104 Uniprot:F1RSM3
Length = 1944
Score = 511 (184.9 bits), Expect = 3.2e-51, Sum P(3) = 3.2e-51
Identities = 160/515 (31%), Positives = 262/515 (50%)
Query: 309 YQGFIHRVEADEVHLKFASDF--QLNHRDENLYNV--QFTYNRVNMRRLYQATDAAQELD 364
Y+ I + + L+ + + +LN R ++ V QF NR+ + ++ A D + D
Sbjct: 555 YEATIEEKTKEYIFLRISRECCEELNLRPDHDTQVELQFQLNRLPLCEMHYALDRIK--D 612
Query: 365 TEFLFPSESSGIRLIESNTLV---PISCNLNEEQ---MCSIEKILGLKGAPPYLIYGPPG 418
LFP + + S + LN +Q + +I L ++ PP LI GP G
Sbjct: 613 NGVLFPDITMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ-LPPVLIIGPYG 671
Query: 419 TGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI--FRLNA 476
TGKT TL +A+ + +E R+L+C SNSAAD ++ L VE + R+
Sbjct: 672 TGKTFTLAQAVKHILQQQE-TRILICTHSNSAADLYIKDYL-HPYVEAGNPQARPLRVYF 729
Query: 477 PSRPYEDVNADHIRFCFFDE--QIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFS 534
+R + V+ ++C F+ P ++ +R+++ T ++ + ++ G F+
Sbjct: 730 RNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFT 789
Query: 535 HIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERL 594
HI LDEA QA E E+++P++ K+T +VLAGD MQL P +YS A + S L+RL
Sbjct: 790 HILLDEAAQAMECETIMPLA-LATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL 848
Query: 595 FECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNK 654
+E P L NYRSH I++ S+LFYE +L+A + A+ +F
Sbjct: 849 YEHYP---AEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQP----AHKDF---- 897
Query: 655 EFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKL-----TSTGNLSEEDIGVITPY 709
+P+ FF +G D +E ++ +++N EV +VVE +++L + G L + IGV+TPY
Sbjct: 898 -YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPY 956
Query: 710 RQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRS--TIKHND--FDRKHCL- 764
QV ++ L + D+ V V QG++ +V+ +STVR+ T KH +K L
Sbjct: 957 ADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLL 1016
Query: 765 ---------GFLSNPRRFNVAVTRAISLLIIIGNP 790
GFLSN + N A+TRA SL+ ++G+P
Sbjct: 1017 EDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDP 1051
Score = 97 (39.2 bits), Expect = 3.2e-51, Sum P(3) = 3.2e-51
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 765 GFLSNPRRFNVAVTRAISLLIIIGNPHIVSK----DPYWHQLLWYCSDNNSYQG 814
GFLSN + N A+TRA SL+ ++G+P + +W + + C +NNS G
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHG 1079
Score = 61 (26.5 bits), Expect = 3.2e-51, Sum P(3) = 3.2e-51
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 127 QTLTIWLSCKPKGIGLHTTVLQFDVEDRIERVVFLLAED---KISQSLASKRPYSRGGRK 183
QT T L+CKP + L+ L +D ++ + A D ++SQ + GG+
Sbjct: 279 QTWTFALTCKPARM-LYRVALLYDAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKM 337
Query: 184 KQFSVDKYV 192
Q +D YV
Sbjct: 338 AQNGLDHYV 346
>UNIPROTKB|F1NPN9 [details] [associations]
symbol:LOC100857488 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:AADN02030025 IPI:IPI00575663
Ensembl:ENSGALT00000005876 Uniprot:F1NPN9
Length = 1931
Score = 544 (196.6 bits), Expect = 3.8e-51, Sum P(2) = 3.8e-51
Identities = 168/543 (30%), Positives = 272/543 (50%)
Query: 309 YQGFIHRVEADEVHLKFASDF--QLNHR-D-ENLYNVQFTYNRVNMRRLYQATDAAQELD 364
Y+ I D + L+ + + +LN R D E +QF NR+ + ++ A D + D
Sbjct: 543 YEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLCEMHYALDRIK--D 600
Query: 365 TEFLFPSESSGIRLIESNTLV---PISCNLNEEQ---MCSIEKILGLKGAPPYLIYGPPG 418
LFP S + S + LN +Q + +I L ++ PP LI GP G
Sbjct: 601 NSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ-LPPVLIIGPYG 659
Query: 419 TGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI--FRLNA 476
TGKT TL +A+ + ++ +R+L+C SNSAAD ++ L VE + R+
Sbjct: 660 TGKTFTLAQAVKHILQQQDTSRILICTHSNSAADLYIKDYL-HPYVEAGNPQARPLRVYF 718
Query: 477 PSRPYEDVNADHIRFCFFDE--QIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFS 534
+R + V+ ++C F+ P ++ R+++ T ++ + ++ G F+
Sbjct: 719 RNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQLDLEPGFFT 778
Query: 535 HIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERL 594
HI LDEA QA E E+++P++ K+T +VLAGD MQL P +YS A + S L+RL
Sbjct: 779 HILLDEAAQAMECETIMPLA-LANKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL 837
Query: 595 FECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNK 654
+E P L NYRSH I++ S+LFYE +L+A + A+ +F
Sbjct: 838 YEHYP---AEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQP----AHKDF---- 886
Query: 655 EFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKL-----TSTGNLSEEDIGVITPY 709
+P+ FF +G D +E ++ +++N EV +VVE +++L + G L + IGV+TPY
Sbjct: 887 -YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPY 945
Query: 710 RQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRS--TIKHND--FDRKHCL- 764
QV ++ L + D+ V V QG++ +V+ +STVR+ T KH RK L
Sbjct: 946 ADQVFRIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLL 1005
Query: 765 ---------GFLSNPRRFNVAVTRAISLLIIIGNPHIVSK----DPYWHQLLWYCSDNNS 811
GFLSN + N A+TRA SL+ ++G+P + +W + + C +N S
Sbjct: 1006 EDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENES 1065
Query: 812 YQG 814
G
Sbjct: 1066 LHG 1068
Score = 74 (31.1 bits), Expect = 3.8e-51, Sum P(2) = 3.8e-51
Identities = 39/165 (23%), Positives = 70/165 (42%)
Query: 144 TTVLQFDVEDRI-ERVVFLLAEDKISQSLASKRPYSRGGRKKQFSVDKYVVGSRPARYRG 202
T V F +E + +RV+ A + + L R K+ S K +V P
Sbjct: 352 TVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNETT- 410
Query: 203 QIYQNRLPRYDIPNHIRELIERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAY 262
++ ++ L RY IP +L + + LT NY S LL +EEI +++ +
Sbjct: 411 ELEKSLLTRYQIPLSADQLFTQS----VLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKF 466
Query: 263 DMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIFAKHAYEDTSS 307
+++ V L + S ++ G++ NG +F + +T S
Sbjct: 467 NIK-VQLQ---IVASFMLTGVSGGAKYAQNGQ-LFGRFKLTETLS 506
Score = 61 (26.5 bits), Expect = 8.9e-50, Sum P(2) = 8.9e-50
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 127 QTLTIWLSCKPKGIGLHTTVLQFDVEDRIERVVFLLAED---KISQSLASKRPYSRGGRK 183
QT T L+CKP + L+ L +D ++ + A D ++SQ + GG+
Sbjct: 267 QTWTFALTCKPARM-LYRVALLYDAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKM 325
Query: 184 KQFSVDKYV 192
Q +D Y+
Sbjct: 326 VQNGIDHYI 334
>UNIPROTKB|P42694 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 HOVERGEN:HBG031603
OrthoDB:EOG4NP72K EMBL:D29677 EMBL:AC005544 EMBL:AC007448
IPI:IPI00000897 UniGene:Hs.370140 UniGene:Hs.569824
ProteinModelPortal:P42694 SMR:P42694 IntAct:P42694 STRING:P42694
PhosphoSite:P42694 DMDM:221222452 PaxDb:P42694 PRIDE:P42694
Ensembl:ENST00000358691 UCSC:uc002jfx.4 GeneCards:GC17M065066
HGNC:HGNC:16878 HPA:HPA028276 MIM:606699 neXtProt:NX_P42694
InParanoid:P42694 OMA:YRVALLY ChiTaRS:HELZ ArrayExpress:P42694
Bgee:P42694 CleanEx:HS_HELZ Genevestigator:P42694
GermOnline:ENSG00000198265 Uniprot:P42694
Length = 1942
Score = 509 (184.2 bits), Expect = 6.8e-51, Sum P(3) = 6.8e-51
Identities = 159/515 (30%), Positives = 261/515 (50%)
Query: 309 YQGFIHRVEADEVHLKFASDF--QLNHRDE--NLYNVQFTYNRVNMRRLYQATDAAQELD 364
Y+ I + + L+ + + +LN R + +QF NR+ + ++ A D + D
Sbjct: 555 YEATIEEKTKEYIFLRLSRECCEELNLRPDCDTQVELQFQLNRLPLCEMHYALDRIK--D 612
Query: 365 TEFLFPSESSGIRLIESNTLV---PISCNLNEEQ---MCSIEKILGLKGAPPYLIYGPPG 418
LFP S + S + LN +Q + +I L ++ PP LI GP G
Sbjct: 613 NGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQ-LPPVLIIGPYG 671
Query: 419 TGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI--FRLNA 476
TGKT TL +A+ + +E R+L+C SNSAAD ++ L VE + R+
Sbjct: 672 TGKTFTLAQAVKHILQQQE-TRILICTHSNSAADLYIKDYL-HPYVEAGNPQARPLRVYF 729
Query: 477 PSRPYEDVNADHIRFCFFDE--QIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFS 534
+R + V+ ++C F+ P ++ +R+++ T ++ + ++ G F+
Sbjct: 730 RNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFT 789
Query: 535 HIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERL 594
HI LDEA QA E E+++P++ ++T +VLAGD MQL P +YS A + S L+RL
Sbjct: 790 HILLDEAAQAMECETIMPLA-LATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL 848
Query: 595 FECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNK 654
+E P L NYRSH I++ S+LFYE +L+A + A+ +F
Sbjct: 849 YEHYP---AEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQP----AHKDF---- 897
Query: 655 EFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKL-----TSTGNLSEEDIGVITPY 709
+P+ FF +G D +E ++ +++N EV +VVE +++L + G L + IGV+TPY
Sbjct: 898 -YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPY 956
Query: 710 RQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRS--TIKHND--FDRKHCL- 764
QV ++ L + D+ V V QG++ +V+ +STVR+ T KH +K L
Sbjct: 957 ADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLL 1016
Query: 765 ---------GFLSNPRRFNVAVTRAISLLIIIGNP 790
GFLSN + N A+TRA SL+ ++G+P
Sbjct: 1017 EDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDP 1051
Score = 92 (37.4 bits), Expect = 6.8e-51, Sum P(3) = 6.8e-51
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 765 GFLSNPRRFNVAVTRAISLLIIIGNPHIVSK----DPYWHQLLWYCSDNNSYQG 814
GFLSN + N A+TRA SL+ ++G+P + +W + + C +N+S G
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSLHG 1079
Score = 65 (27.9 bits), Expect = 6.8e-51, Sum P(3) = 6.8e-51
Identities = 36/163 (22%), Positives = 65/163 (39%)
Query: 144 TTVLQFDVEDRI-ERVVFLLAEDKISQSLASKRPYSRGGRKKQFSVDKYVVGSRPARYRG 202
T V F +E + +RV+ A + + L + K+ S K ++ P
Sbjct: 364 TIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNETT- 422
Query: 203 QIYQNRLPRYDIPNHIRELIERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAY 262
+ ++ L RY IP +L + + LT NY S LL +EEI +++ +
Sbjct: 423 DLEKSLLIRYQIPLSADQLFTQS----VLDKSLTKSNYQSRLHDLLYIEEIAQYKEISKF 478
Query: 263 DMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIFAKHAYEDT 305
+++ + L+ V G + + G F + EDT
Sbjct: 479 NLKVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDT 521
Score = 61 (26.5 bits), Expect = 1.8e-50, Sum P(3) = 1.8e-50
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 127 QTLTIWLSCKPKGIGLHTTVLQFDVEDRIERVVFLLAED---KISQSLASKRPYSRGGRK 183
QT T L+CKP + L+ L +D ++ + A D ++SQ + GG+
Sbjct: 279 QTWTFALTCKPARM-LYRVALLYDAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKM 337
Query: 184 KQFSVDKYV 192
Q +D YV
Sbjct: 338 AQNGLDHYV 346
>MGI|MGI:1925705 [details] [associations]
symbol:Helz "helicase with zinc finger domain" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:1925705
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 CTD:9931
HOGENOM:HOG000231202 HOVERGEN:HBG031603 EMBL:AB093209 EMBL:AL645947
EMBL:BC021818 EMBL:BC076626 EMBL:BC130582 EMBL:AK033094
IPI:IPI00453654 IPI:IPI00649664 IPI:IPI00915056 RefSeq:NP_938040.1
UniGene:Mm.272047 UniGene:Mm.394603 UniGene:Mm.490425
ProteinModelPortal:Q6DFV5 SMR:Q6DFV5 IntAct:Q6DFV5 STRING:Q6DFV5
PhosphoSite:Q6DFV5 PaxDb:Q6DFV5 PRIDE:Q6DFV5
Ensembl:ENSMUST00000075012 Ensembl:ENSMUST00000106746 GeneID:78455
KEGG:mmu:78455 UCSC:uc007mav.1 GeneTree:ENSGT00550000074391
InParanoid:Q8BZZ6 NextBio:348914 Bgee:Q6DFV5 Genevestigator:Q6DFV5
Uniprot:Q6DFV5
Length = 1964
Score = 511 (184.9 bits), Expect = 8.7e-51, Sum P(3) = 8.7e-51
Identities = 161/515 (31%), Positives = 263/515 (51%)
Query: 309 YQGFIHRVEADEVHLKFASDF--QLNHR-DENLY-NVQFTYNRVNMRRLYQATDAAQELD 364
Y+ I D V L+ + + +L+ R D ++ +QF NR+ + ++ A D + D
Sbjct: 555 YEATIEEKTKDYVFLRISRECCEELSLRPDCDIQVELQFQLNRLPLCEMHYALDRIK--D 612
Query: 365 TEFLFPSESSGIRLIESNTLV---PISCNLNEEQ---MCSIEKILGLKGAPPYLIYGPPG 418
LFP S + S + LN +Q + +I L ++ PP LI GP G
Sbjct: 613 NAVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ-LPPVLIIGPYG 671
Query: 419 TGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI--FRLNA 476
TGKT TL +A + +E R+L+C SNSAAD ++ L VE + R+
Sbjct: 672 TGKTFTLAQAAKHILQQQE-TRILICTHSNSAADLYIKDYL-HPYVEAGNPQARPLRVYF 729
Query: 477 PSRPYEDVNADHIRFCFFD--EQIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFS 534
+R + V+ ++C + F+ P ++ +R+++ T ++ + ++ G F+
Sbjct: 730 RNRWVKTVHPVVHQYCLISSTQSTFQMPQKEDILKHRVVVVTLSTSQYLCQLDLEPGFFT 789
Query: 535 HIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERL 594
H+ LDEA QA E E+++P++ K+T +VLAGD MQL P +YS A + S L+RL
Sbjct: 790 HVLLDEAAQAMECETIMPLA-LATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL 848
Query: 595 FECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNK 654
+E P L NYRSH I++ S+LFYE +L+A + A+ +F
Sbjct: 849 YEHYP---AEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQP----AHKDF---- 897
Query: 655 EFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKL-----TSTGNLSEEDIGVITPY 709
+P+ FF +G D +E ++ +++N EV +VVE +++L + G L + IGV+TPY
Sbjct: 898 -YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPY 956
Query: 710 RQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRS--TIKHND--FDRKHCL- 764
QV ++ L + D+ V V QG++ +V+ +STVR+ T KH +K L
Sbjct: 957 ADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLL 1016
Query: 765 ---------GFLSNPRRFNVAVTRAISLLIIIGNP 790
GFLSN + N A+TRA SL+ ++G+P
Sbjct: 1017 EDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDP 1051
Score = 92 (37.4 bits), Expect = 8.7e-51, Sum P(3) = 8.7e-51
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 765 GFLSNPRRFNVAVTRAISLLIIIGNPHIVSK----DPYWHQLLWYCSDNNSYQG 814
GFLSN + N A+TRA SL+ ++G+P + +W + + C +N+S G
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPVALCSIGRCRKFWERFIALCHENHSLHG 1079
Score = 62 (26.9 bits), Expect = 8.7e-51, Sum P(3) = 8.7e-51
Identities = 37/164 (22%), Positives = 67/164 (40%)
Query: 144 TTVLQFDVEDRI-ERVVFLLAE-DKISQSLASKRPYSRGGRKKQFSVDKYVVGSRPARYR 201
T V F +E + +RV+ A + + + +KR K+ S K +V P
Sbjct: 364 TIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKRQLVTTA-KRWDSSSKTIVDFEPNETT 422
Query: 202 GQIYQNRLPRYDIPNHIRELIERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRA 261
+ ++ L RY IP +L + + LT NY + LL +EEI +++
Sbjct: 423 -DLEKSLLIRYQIPLSADQLFTQS----VLDKSLTKTNYQARLHDLLYIEEIAQYKEVSR 477
Query: 262 YDMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIFAKHAYEDT 305
++++ + L+ V G + + G F + EDT
Sbjct: 478 FNLKVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDT 521
Score = 61 (26.5 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 127 QTLTIWLSCKPKGIGLHTTVLQFDVEDRIERVVFLLAED---KISQSLASKRPYSRGGRK 183
QT T L+CKP + L+ L +D ++ + A D ++SQ + GG+
Sbjct: 279 QTWTFALTCKPARM-LYRVALLYDAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKM 337
Query: 184 KQFSVDKYV 192
Q +D YV
Sbjct: 338 AQNGLDHYV 346
>UNIPROTKB|I6L9H4 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
UniGene:Hs.370140 UniGene:Hs.569824 HGNC:HGNC:16878 ChiTaRS:HELZ
EMBL:BC094881 ProteinModelPortal:I6L9H4 Ensembl:ENST00000579953
Uniprot:I6L9H4
Length = 1163
Score = 535 (193.4 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 164/543 (30%), Positives = 273/543 (50%)
Query: 309 YQGFIHRVEADEVHLKFASDF--QLNHRDE--NLYNVQFTYNRVNMRRLYQATDAAQELD 364
Y+ I + + L+ + + +LN R + +QF NR+ + ++ A D + D
Sbjct: 555 YEATIEEKTKEYIFLRLSRECCEELNLRPDCDTQVELQFQLNRLPLCEMHYALDRIK--D 612
Query: 365 TEFLFPSESSGIRLIESNTLV---PISCNLNEEQ---MCSIEKILGLKGAPPYLIYGPPG 418
LFP S + S + LN +Q + +I L ++ PP LI GP G
Sbjct: 613 NGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQ-LPPVLIIGPYG 671
Query: 419 TGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI--FRLNA 476
TGKT TL +A+ + +E +R+L+C SNSAAD ++ L VE + R+
Sbjct: 672 TGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYL-HPYVEAGNPQARPLRVYF 730
Query: 477 PSRPYEDVNADHIRFCFFDE--QIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFS 534
+R + V+ ++C F+ P ++ +R+++ T ++ + ++ G F+
Sbjct: 731 RNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFT 790
Query: 535 HIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERL 594
HI LDEA QA E E+++P++ ++T +VLAGD MQL P +YS A + S L+RL
Sbjct: 791 HILLDEAAQAMECETIMPLA-LATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL 849
Query: 595 FECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNK 654
+E P L NYRSH I++ S+LFYE +L+A + A+ +F
Sbjct: 850 YEHYP---AEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQP----AHKDF---- 898
Query: 655 EFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKL-----TSTGNLSEEDIGVITPY 709
+P+ FF +G D +E ++ +++N EV +VVE +++L + G L + IGV+TPY
Sbjct: 899 -YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPY 957
Query: 710 RQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRS--TIKHND--FDRKHCL- 764
QV ++ L + D+ V V QG++ +V+ +STVR+ T KH +K L
Sbjct: 958 ADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLL 1017
Query: 765 ---------GFLSNPRRFNVAVTRAISLLIIIGNPHIVSK----DPYWHQLLWYCSDNNS 811
GFLSN + N A+TRA SL+ ++G+P + +W + + C +N+S
Sbjct: 1018 EDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSS 1077
Query: 812 YQG 814
G
Sbjct: 1078 LHG 1080
Score = 65 (27.9 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 36/163 (22%), Positives = 65/163 (39%)
Query: 144 TTVLQFDVEDRI-ERVVFLLAEDKISQSLASKRPYSRGGRKKQFSVDKYVVGSRPARYRG 202
T V F +E + +RV+ A + + L + K+ S K ++ P
Sbjct: 364 TIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNETT- 422
Query: 203 QIYQNRLPRYDIPNHIRELIERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAY 262
+ ++ L RY IP +L + + LT NY S LL +EEI +++ +
Sbjct: 423 DLEKSLLIRYQIPLSADQLFTQS----VLDKSLTKSNYQSRLHDLLYIEEIAQYKEISKF 478
Query: 263 DMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIFAKHAYEDT 305
+++ + L+ V G + + G F + EDT
Sbjct: 479 NLKVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDT 521
Score = 61 (26.5 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 127 QTLTIWLSCKPKGIGLHTTVLQFDVEDRIERVVFLLAED---KISQSLASKRPYSRGGRK 183
QT T L+CKP + L+ L +D ++ + A D ++SQ + GG+
Sbjct: 279 QTWTFALTCKPARM-LYRVALLYDAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKM 337
Query: 184 KQFSVDKYV 192
Q +D YV
Sbjct: 338 AQNGLDHYV 346
>UNIPROTKB|J3QS41 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
HGNC:HGNC:16878 ChiTaRS:HELZ Ensembl:ENST00000580168 Uniprot:J3QS41
Length = 1943
Score = 535 (193.4 bits), Expect = 3.7e-49, Sum P(2) = 3.7e-49
Identities = 164/543 (30%), Positives = 273/543 (50%)
Query: 309 YQGFIHRVEADEVHLKFASDF--QLNHRDE--NLYNVQFTYNRVNMRRLYQATDAAQELD 364
Y+ I + + L+ + + +LN R + +QF NR+ + ++ A D + D
Sbjct: 555 YEATIEEKTKEYIFLRLSRECCEELNLRPDCDTQVELQFQLNRLPLCEMHYALDRIK--D 612
Query: 365 TEFLFPSESSGIRLIESNTLV---PISCNLNEEQ---MCSIEKILGLKGAPPYLIYGPPG 418
LFP S + S + LN +Q + +I L ++ PP LI GP G
Sbjct: 613 NGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQ-LPPVLIIGPYG 671
Query: 419 TGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI--FRLNA 476
TGKT TL +A+ + +E +R+L+C SNSAAD ++ L VE + R+
Sbjct: 672 TGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYL-HPYVEAGNPQARPLRVYF 730
Query: 477 PSRPYEDVNADHIRFCFFDE--QIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFS 534
+R + V+ ++C F+ P ++ +R+++ T ++ + ++ G F+
Sbjct: 731 RNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFT 790
Query: 535 HIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERL 594
HI LDEA QA E E+++P++ ++T +VLAGD MQL P +YS A + S L+RL
Sbjct: 791 HILLDEAAQAMECETIMPLA-LATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL 849
Query: 595 FECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNK 654
+E P L NYRSH I++ S+LFYE +L+A + A+ +F
Sbjct: 850 YEHYP---AEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQP----AHKDF---- 898
Query: 655 EFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKL-----TSTGNLSEEDIGVITPY 709
+P+ FF +G D +E ++ +++N EV +VVE +++L + G L + IGV+TPY
Sbjct: 899 -YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPY 957
Query: 710 RQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRS--TIKHND--FDRKHCL- 764
QV ++ L + D+ V V QG++ +V+ +STVR+ T KH +K L
Sbjct: 958 ADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLL 1017
Query: 765 ---------GFLSNPRRFNVAVTRAISLLIIIGNPHIVSK----DPYWHQLLWYCSDNNS 811
GFLSN + N A+TRA SL+ ++G+P + +W + + C +N+S
Sbjct: 1018 EDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSS 1077
Query: 812 YQG 814
G
Sbjct: 1078 LHG 1080
Score = 65 (27.9 bits), Expect = 3.7e-49, Sum P(2) = 3.7e-49
Identities = 36/163 (22%), Positives = 65/163 (39%)
Query: 144 TTVLQFDVEDRI-ERVVFLLAEDKISQSLASKRPYSRGGRKKQFSVDKYVVGSRPARYRG 202
T V F +E + +RV+ A + + L + K+ S K ++ P
Sbjct: 364 TIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNETT- 422
Query: 203 QIYQNRLPRYDIPNHIRELIERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAY 262
+ ++ L RY IP +L + + LT NY S LL +EEI +++ +
Sbjct: 423 DLEKSLLIRYQIPLSADQLFTQS----VLDKSLTKSNYQSRLHDLLYIEEIAQYKEISKF 478
Query: 263 DMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIFAKHAYEDT 305
+++ + L+ V G + + G F + EDT
Sbjct: 479 NLKVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDT 521
Score = 61 (26.5 bits), Expect = 9.7e-49, Sum P(2) = 9.7e-49
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 127 QTLTIWLSCKPKGIGLHTTVLQFDVEDRIERVVFLLAED---KISQSLASKRPYSRGGRK 183
QT T L+CKP + L+ L +D ++ + A D ++SQ + GG+
Sbjct: 279 QTWTFALTCKPARM-LYRVALLYDAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKM 337
Query: 184 KQFSVDKYV 192
Q +D YV
Sbjct: 338 AQNGLDHYV 346
>RGD|1307049 [details] [associations]
symbol:Helz "helicase with zinc finger" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 RGD:1307049
GO:GO:0008270 GO:GO:0003676 CTD:9931 OrthoDB:EOG4NP72K OMA:YRVALLY
GeneTree:ENSGT00550000074391 IPI:IPI00364329 RefSeq:NP_001099318.2
ProteinModelPortal:D4ADZ6 Ensembl:ENSRNOT00000030300 GeneID:287773
KEGG:rno:287773 Uniprot:D4ADZ6
Length = 1964
Score = 536 (193.7 bits), Expect = 4.2e-48, Sum P(2) = 4.2e-48
Identities = 166/543 (30%), Positives = 273/543 (50%)
Query: 309 YQGFIHRVEADEVHLKFASDF--QLNHRDE--NLYNVQFTYNRVNMRRLYQATDAAQELD 364
Y+ I D V L+ + + +L+ R + +QF NR+ + ++ A D + D
Sbjct: 555 YEATIEEKTKDYVFLRISRECCEELSLRPDCDTQVELQFQLNRLPLCEMHYALDRIK--D 612
Query: 365 TEFLFPSESSGIRLIESNTLV---PISCNLNEEQ---MCSIEKILGLKGAPPYLIYGPPG 418
LFP S + S + LN +Q + +I L ++ PP LI GP G
Sbjct: 613 NGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLCIQ-LPPVLIIGPYG 671
Query: 419 TGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI--FRLNA 476
TGKT TL +A+ + +E +R+L+C SNSAAD ++ L VE + R+
Sbjct: 672 TGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYL-HPYVEAGNAQARPLRVYF 730
Query: 477 PSRPYEDVNADHIRFCFFDE--QIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFS 534
+R + V+ ++C F+ P ++ +R+++ T ++ + ++ G F+
Sbjct: 731 RNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFT 790
Query: 535 HIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERL 594
HI LDEA QA E E+++P++ K+T +VLAGD MQL P +YS A + S L+RL
Sbjct: 791 HILLDEAAQAMECETIMPLA-LATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL 849
Query: 595 FECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNK 654
+E P L NYRSH I++ S+LFYE +L+A + A+ +F
Sbjct: 850 YEHYP---AEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQP----AHKDF---- 898
Query: 655 EFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKL-----TSTGNLSEEDIGVITPY 709
+P+ FF +G D +E ++ +++N EV +VVE +++L + G L + IGV+TPY
Sbjct: 899 -YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPY 957
Query: 710 RQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRS--TIKHND--FDRKHCL- 764
QV ++ L + D+ V V QG++ +V+ +STVR+ T KH +K L
Sbjct: 958 ADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLL 1017
Query: 765 ---------GFLSNPRRFNVAVTRAISLLIIIGNPHIVSK----DPYWHQLLWYCSDNNS 811
GFLSN + N A+TRA SL+ ++G+P + +W + + C +N+S
Sbjct: 1018 EDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPVALCSIGRCRKFWERFIALCHENHS 1077
Query: 812 YQG 814
G
Sbjct: 1078 LHG 1080
Score = 54 (24.1 bits), Expect = 4.2e-48, Sum P(2) = 4.2e-48
Identities = 20/69 (28%), Positives = 30/69 (43%)
Query: 127 QTLTIWLSCKPKGIGLHTTVLQFDVEDRIERVVFLLAED---KISQSLASKRPYSRGGRK 183
QT T L+CKP + L L +D ++ + A D ++SQ + GG
Sbjct: 279 QTWTFALTCKPARM-LCRVALLYDAHRPHFSIIAISAGDSTAQVSQEVPENCQEWIGGEM 337
Query: 184 KQFSVDKYV 192
Q +D YV
Sbjct: 338 AQNGLDHYV 346
>FB|FBgn0036451 [details] [associations]
symbol:CG9425 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR003593
InterPro:IPR007087 InterPro:IPR011990 InterPro:IPR015880
Pfam:PF00642 PROSITE:PS00028 SMART:SM00355 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0017111 eggNOG:COG1112
GeneTree:ENSGT00550000074391 RefSeq:NP_996084.1 UniGene:Dm.11708
ProteinModelPortal:Q7KUL0 SMR:Q7KUL0 STRING:Q7KUL0 PaxDb:Q7KUL0
PRIDE:Q7KUL0 EnsemblMetazoa:FBtr0075693 EnsemblMetazoa:FBtr0333074
EnsemblMetazoa:FBtr0333075 GeneID:39613 KEGG:dme:Dmel_CG9425
UCSC:CG9425-RB FlyBase:FBgn0036451 InParanoid:Q7KUL0 OMA:WINELSG
OrthoDB:EOG46HDRH PhylomeDB:Q7KUL0 ChiTaRS:CG9425 GenomeRNAi:39613
NextBio:814517 ArrayExpress:Q7KUL0 Bgee:Q7KUL0 Uniprot:Q7KUL0
Length = 2103
Score = 512 (185.3 bits), Expect = 8.0e-46, Sum P(2) = 8.0e-46
Identities = 163/520 (31%), Positives = 265/520 (50%)
Query: 307 SAYQGFIHRVEADEVHLKFAS---DFQLNHRDENL-YNVQFTYNRVNMRRLYQATDAAQE 362
+ Y+ I + ++LK ++ + D L ++QF NR+ + A D
Sbjct: 717 AVYEALIEDKGKNVIYLKLSAKCVEAMALQADTELEVDIQFQLNRMPYCEWHNAVDKIT- 775
Query: 363 LDTEFLFPSES--SGIRLIESNTLVPISCN--LNEEQMCSIEKI---LGLKGAPPYLIYG 415
D +FP+ I SC LN +Q ++ I L +K PP L+ G
Sbjct: 776 -DFRLIFPATELEPSIPWTPKKQWAD-SCEPKLNAKQREAVNAITTALSIK-LPPILLIG 832
Query: 416 PPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVE-VRENEIFRL 474
P GTGKT TL +AI QL T+ +A++L+C SNSAAD +++ L E ++E R+
Sbjct: 833 PFGTGKTYTLAQAIKQLL-TQPEAKILICTHSNSAADLYIKEYLHPWIEEGLKEATPLRV 891
Query: 475 NAPSRPYEDVNADHIRFCFFDEQ-IFKCPPLAALVCYRIIISTYMSASLIYAE-GVDRGH 532
R VN ++C D F P + ++ +RI++ T +S S+ A G+ +G
Sbjct: 892 YYHKRWSATVNGVVQKYCITDGVGNFLRPTVEDIMRHRIVVVT-LSISMELATLGLPKGL 950
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLE 592
F+HIFLDEA QA E E+++P++ T +VLAGD MQ+ P ++S A+ + S LE
Sbjct: 951 FTHIFLDEAAQAMECEAIMPLA-LANDSTRIVLAGDHMQMSPELFSAFAKERKLHISLLE 1009
Query: 593 RLFECEPYCHGNENYVTKLV--RNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF 650
RL++ H N+ K++ NYR+H I+ S+LFYE++L+A +
Sbjct: 1010 RLYD-----HYPSNFPCKILLCENYRAHEAIIRFTSELFYEQKLVASGKQPRH------- 1057
Query: 651 LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKL-----TSTGNLSEEDIGV 705
++ +P+ FF +G D ++ ++ +++N EV +VVE + +L ++ G L++ IG+
Sbjct: 1058 --DRFYPLTFFTTRGEDVQDKNSTAFYNNAEVYEVVERVSELRKRWPSAWGKLNDTSIGI 1115
Query: 706 ITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVR--------------- 750
+TPY QV ++ L M I V V QG++ + + +STVR
Sbjct: 1116 MTPYSDQVFRIRSELRKRRMGGISVERVLNVQGKQFRAVFLSTVRTRRTCMPQGSAPGSA 1175
Query: 751 STIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNP 790
ST D D + GFLSN + N A+TRA SL+ ++G+P
Sbjct: 1176 STTSIGDADADY--GFLSNSKLLNTAITRAQSLVAVVGDP 1213
Score = 59 (25.8 bits), Expect = 8.0e-46, Sum P(2) = 8.0e-46
Identities = 30/103 (29%), Positives = 39/103 (37%)
Query: 217 HIRELIERKQIPDAIT----------DGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMEN 266
H REL+ER P A T LT NY S LL +EEI E + Y++
Sbjct: 585 HERELLERYPCPRAATFTLTQSTIVEKRLTQNNYRSRIHELLSVEEIARYEQIARYNVRT 644
Query: 267 VTLMRKGLYLSLVVPGLAERRPSLVNGDFIF---AKHAYEDTS 306
+ L+ + + SL F K EDTS
Sbjct: 645 RLTVASNYILTPAGMATSTAKYSLAGELFALMRLGKDISEDTS 687
>ZFIN|ZDB-GENE-040426-2419 [details] [associations]
symbol:helz "helicase with zinc finger"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR011539 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 ZFIN:ZDB-GENE-040426-2419 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676
GO:GO:0004386 eggNOG:COG1112 EMBL:BC066461 IPI:IPI00500029
RefSeq:NP_998431.1 UniGene:Dr.35354 ProteinModelPortal:Q6NYU2
GeneID:406550 KEGG:dre:406550 CTD:9931 HOGENOM:HOG000231202
HOVERGEN:HBG031603 OrthoDB:EOG4NP72K NextBio:20818112
ArrayExpress:Q6NYU2 Uniprot:Q6NYU2
Length = 1860
Score = 507 (183.5 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 164/518 (31%), Positives = 258/518 (49%)
Query: 309 YQGFIHRVEADEVHLKFASDF--QLNH-RDENLY-NVQFTYNRVNMRRLYQATDAAQELD 364
Y+ I D + L+ + +L D+ L +QF NR+ + ++ A D + D
Sbjct: 548 YEALIEEKTKDYIFLRVCKECCDELGLVADQELQVELQFQLNRLPLCEMHYALDRVR--D 605
Query: 365 TEFLFPSESSGIRLIESNTLV---PISCNLNEEQMCSIEKI---LGLKGAPPYLIYGPPG 418
LFP S + S + LN +Q +I I L + PP LI GP G
Sbjct: 606 NSILFPDISLTPTIPWSPNRQWDEQLDPRLNAKQKEAILAITTPLSIN-LPPVLIIGPYG 664
Query: 419 TGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI--FRLNA 476
TGKT TL +A+ + E +R+L+C SNSAAD ++ L VE R+
Sbjct: 665 TGKTFTLAQAVKHILKQPE-SRVLICTHSNSAADLYIKDYL-HPYVEAGNPHARPLRVYF 722
Query: 477 PSRPYEDVNADHIRFCFFDEQ--IFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFS 534
+R + V+ ++C F+ P + +R+++ T ++ + ++ G F+
Sbjct: 723 RNRWVKTVHPLVQQYCLISGAHFTFQMPTRQDVERHRVVVVTLSTSQYLCQLDLEPGIFT 782
Query: 535 HIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERL 594
HI LDEA QA E E+++P++ K T VVLAGD MQL P +YS A + S L+RL
Sbjct: 783 HILLDEAAQAMECETIMPLA-LAVKSTRVVLAGDHMQLSPFVYSEFARERNLHVSLLDRL 841
Query: 595 FECEPYCHGNENYVTKLV--RNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLP 652
+E H Y +++ NYRSH I++ S LFYE +L+A + P
Sbjct: 842 YE-----HYPSEYPCRILLCENYRSHEAIINYTSDLFYEGKLMASGKQP----------P 886
Query: 653 NKEF-PVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKL-----TSTGNLSEEDIGVI 706
+K+F P+ FF +G D +E ++ +++N EV ++VE ++++ S G L E IGV+
Sbjct: 887 HKDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEEMRKKWPVSWGKLEEGSIGVV 946
Query: 707 TPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRS--TIKHND--FDRKH 762
+PY QV ++ L M ++ V V QG++ +V+ +STVR+ T KH RK
Sbjct: 947 SPYADQVFRIRAELRKKRMSEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKRKE 1006
Query: 763 CL----------GFLSNPRRFNVAVTRAISLLIIIGNP 790
L GFLSN + N A+TRA SL+ ++G+P
Sbjct: 1007 QLVEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDP 1044
Score = 341 (125.1 bits), Expect = 3.5e-27, Sum P(2) = 3.5e-27
Identities = 143/521 (27%), Positives = 236/521 (45%)
Query: 335 DENLY-NVQFTYNRVNMRRLYQATDAAQELDTEF----LFPSESSGIRLIESNTLVPISC 389
D+ L +QF NR+ + ++ A D ++ F L P+ L P
Sbjct: 577 DQELQVELQFQLNRLPLCEMHYALDRVRDNSILFPDISLTPTIPWSPNRQWDEQLDPRLN 636
Query: 390 NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
+E + +I L + PP LI GP GTGKT TL +A+ + E +R+L+C SNS
Sbjct: 637 AKQKEAILAITTPLSIN-LPPVLIIGPYGTGKTFTLAQAVKHILKQPE-SRVLICTHSNS 694
Query: 450 AADHLLEKILGEKAVEVRENEI--FRLNAPSRPYEDVNADHIRFCFFDEQ--IFKCPPLA 505
AAD ++ L VE R+ +R + V+ ++C F+ P
Sbjct: 695 AADLYIKDYL-HPYVEAGNPHARPLRVYFRNRWVKTVHPLVQQYCLISGAHFTFQMPTRQ 753
Query: 506 ALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVL 565
+ +R+++ T ++ + ++ G F+HI LDEA QA E E+++P++ K T VVL
Sbjct: 754 DVERHRVVVVTLSTSQYLCQLDLEPGIFTHILLDEAAQAMECETIMPLA-LAVKSTRVVL 812
Query: 566 AGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLV--RNYRSHPQILH 623
AGD MQL P +YS A + S L+RL+E H Y +++ NYRSH I++
Sbjct: 813 AGDHMQLSPFVYSEFARERNLHVSLLDRLYE-----HYPSEYPCRILLCENYRSHEAIIN 867
Query: 624 LPSKLFYEEELIAC------KD-----------ESI---SCTAYLNFLPNKEFPVLFFGI 663
S LFYE +L+A KD E + + TAY N N E +F +
Sbjct: 868 YTSDLFYEGKLMASGKQPPHKDFYPLTFFTARGEDVQEKNSTAYYN---NAE---VFEIV 921
Query: 664 QGCDEREGSNP-SWFNRIEVSKVVEII----QKLTSTGNLSEEDIGVITPYRQQVLKLN- 717
+ +E P SW ++E + + Q L ++ + ++ R VL +
Sbjct: 922 ERVEEMRKKWPVSW-GKLEEGSIGVVSPYADQVFRIRAELRKKRMSEVSVER--VLNVQG 978
Query: 718 KALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAV 777
K L++ ++ + + +Q I ++ + D + GFLSN + N A+
Sbjct: 979 KQFRVLFLSTVRT----RHTCKHKQTAI-KRKEQLVEDSTEDLDY--GFLSNYKLLNTAI 1031
Query: 778 TRAISLLIIIGNPHIVSK----DPYWHQLLWYCSDNNSYQG 814
TRA SL+ ++G+P + +W + C +N+S G
Sbjct: 1032 TRAQSLVAVVGDPIALCSVGRCRKFWETFISICHENHSLHG 1072
Score = 59 (25.8 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 43/181 (23%), Positives = 73/181 (40%)
Query: 128 TLTIWLSCKPKGIGLHTTVLQFDVEDRI-ERVVFLLAEDKISQSLASKRPYSRGGRKKQF 186
T+ I S + G T V E + +RV+ A + + L R K+
Sbjct: 339 TVEIAFSTEIFGTFRQTVVFDLGCEPVLMQRVMVDAASIEDLEHLLQARQQLLMTAKRWD 398
Query: 187 SVDKYVVGSRPARYRGQIYQNRLPRYDIPNHIRELIERKQIPDAITDGLTLKNYTSFFKT 246
S K +V P + ++ L RY IP +L + + LT NY
Sbjct: 399 SSCKTIVEFVPNENM-DLERSLLTRYQIPLSADQLFTQSVLDKT----LTRDNYQPRLHD 453
Query: 247 LLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIFAKHAYEDTS 306
LL +EEI +++ ++++ V L L S ++ G++ NG +FA+ +T
Sbjct: 454 LLYIEEIAQYKEVTKFNIK-VNLQ---LVTSFMLTGISGGAKYAQNGQ-LFARFKLTETL 508
Query: 307 S 307
S
Sbjct: 509 S 509
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 479 (173.7 bits), Expect = 4.6e-42, P = 4.6e-42
Identities = 151/454 (33%), Positives = 228/454 (50%)
Query: 390 NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
+LN Q+ +++ L P LI GPPGTGKT+T + QL +LVCAPSN+
Sbjct: 451 DLNRSQVYAVKHALQ---RPLSLIQGPPGTGKTVTSATIVYQLVKLH-GGTVLVCAPSNT 506
Query: 450 AADHLLEKI--LGEKAVEV----RE------------NEIFRL--NAPSRPYEDVNADHI 489
A D L EKI K V V RE N+I + N+ + + + +
Sbjct: 507 AVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLKDETG 566
Query: 490 RFCFFDEQIFKCPPLAA----LVCYRIIISTYMSASLIYAEG-VDRGHFSHIFLDEAGQA 544
DE+ ++ AA L +I T + A +G + R F+ I +DE+ Q+
Sbjct: 567 ELSSADEKRYRNLKRAAENQLLEAADVICCTCVGAG----DGRLSRVKFTSILIDESMQS 622
Query: 545 SEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGN 604
+EPE MVP+ K+ ++L GD QLGPV+ ++A G+ +S ERL G
Sbjct: 623 TEPECMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-----GI 674
Query: 605 ENYVTKLVRNYRSHPQILHLPSKLFYEEEL---IACKDESISCTAYLNF-LPNKEFPVLF 660
+ +L YR HP++ PS FYE L + +D + L+F P E P+ F
Sbjct: 675 RPF--RLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLK----LDFPWPQPERPMFF 728
Query: 661 FGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ------VL 714
QG +E GS S+ NR E + V +I + G + E IG+ITPY Q +
Sbjct: 729 LVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAG-IKPEQIGIITPYEGQRAYLVQYM 787
Query: 715 KLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFN 774
+ +L S +I++ SV+ FQG+E+ +II+S VRS + + +GFL++PRR N
Sbjct: 788 QYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRS-------NERQGIGFLNDPRRLN 840
Query: 775 VAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSD 808
VA+TRA +II+GNP +++K W+ LL + D
Sbjct: 841 VALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYKD 874
>ASPGD|ASPL0000056713 [details] [associations]
symbol:AN0646 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
HOGENOM:HOG000205990 OMA:MFYEGSL ProteinModelPortal:C8VS08
EnsemblFungi:CADANIAT00002030 Uniprot:C8VS08
Length = 1077
Score = 395 (144.1 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 103/288 (35%), Positives = 158/288 (54%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLE 592
F + +DE+ Q++EPE M+P+ CK+ VVL GD QLGPVI +++A G+ +S E
Sbjct: 583 FRTVLIDESTQSAEPECMIPLVLGCKQ---VVLVGDHQQLGPVIMNKKAAKAGLNQSLFE 639
Query: 593 RL--FECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF 650
RL C P +L YR HP + PS +FYE L ++F
Sbjct: 640 RLVILGCSPI---------RLNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDF 690
Query: 651 -LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPY 709
P + P++F+ G +E S S+ NR E + V +I+ + G + +DIG+ITPY
Sbjct: 691 PWPILDSPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAG-VQPKDIGIITPY 749
Query: 710 RQQVLKLNKALESL------YMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHC 763
Q + ++++ + +I+V SV+ FQG+E+ II+S VRS ND
Sbjct: 750 EGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRS----NDHQG--- 802
Query: 764 LGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNS 811
+GFLS+PRR NVA+TRA L+I+GNP ++SK P W+ LL + + ++
Sbjct: 803 IGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKERHT 850
Score = 133 (51.9 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 46/116 (39%), Positives = 59/116 (50%)
Query: 385 VPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVC 444
VP LN Q+ +++ +L P LI GPPGTGKT+T I L A ++LVC
Sbjct: 418 VPGLPELNGSQINAVKSVLQ---RPLSLIQGPPGTGKTVTSATIIYHL-AKLNGGQVLVC 473
Query: 445 APSNSAADHLLEKI--LGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQI 498
APSN A D L E+I G K V R+ A SR EDV + + F EQ+
Sbjct: 474 APSNVAVDQLCERIHRTGLKTV--------RVTAKSR--EDVESP-VGFLSLHEQV 518
>SGD|S000004685 [details] [associations]
symbol:NAM7 "ATP-dependent RNA helicase of the SFI
superfamily" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IMP] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IGI;IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005844 "polysome" evidence=TAS] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;TAS]
[GO:0006449 "regulation of translational termination" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006452 "translational frameshifting" evidence=IMP] [GO:0008186
"RNA-dependent ATPase activity" evidence=TAS] InterPro:IPR003593
InterPro:IPR018999 Pfam:PF09416 SMART:SM00382 SGD:S000004685
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
GO:GO:0030466 EMBL:BK006946 EMBL:Z49259 GO:GO:0005844 GO:GO:0008298
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0004004
GO:GO:0070478 GO:GO:0006449 GeneTree:ENSGT00550000074391
EMBL:X62394 EMBL:M76659 PIR:S23408 RefSeq:NP_013797.1 PDB:2XZL
PDBsum:2XZL ProteinModelPortal:P30771 SMR:P30771 DIP:DIP-2373N
IntAct:P30771 MINT:MINT-492322 STRING:P30771 PaxDb:P30771
PeptideAtlas:P30771 EnsemblFungi:YMR080C GeneID:855104
KEGG:sce:YMR080C CYGD:YMR080c HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL OrthoDB:EOG405W86 EvolutionaryTrace:P30771
NextBio:978431 Genevestigator:P30771 GermOnline:YMR080C
Uniprot:P30771
Length = 971
Score = 370 (135.3 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 99/281 (35%), Positives = 153/281 (54%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLE 592
F + +DE+ QASEPE ++PI K+ V+L GD QLGPVI R+A G+ +S E
Sbjct: 566 FRTVLIDESTQASEPECLIPIVKGAKQ---VILVGDHQQLGPVILERKAADAGLKQSLFE 622
Query: 593 RLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEEL---IACKDESISCTAYLN 649
RL G+ +L YR +P + PS +FYE L + + ++ + +
Sbjct: 623 RLISL-----GH--VPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFP- 674
Query: 650 FLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPY 709
P + P++F+ G +E + S+ NRIE II KL G + E IGVITPY
Sbjct: 675 -WPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDG-VKPEQIGVITPY 732
Query: 710 RQQ------VLKLNKALES-LYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKH 762
Q +++N +L+ LY+ ++V SV+ FQG+E+ II+S VR+ + +
Sbjct: 733 EGQRAYILQYMQMNGSLDKDLYIK-VEVASVDAFQGREKDYIILSCVRA-------NEQQ 784
Query: 763 CLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLL 803
+GFL +PRR NV +TRA L+I+GNP ++++ W+ LL
Sbjct: 785 AIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLL 825
Score = 146 (56.5 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 44/104 (42%), Positives = 54/104 (51%)
Query: 385 VPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVC 444
+P LN Q ++ +L P LI GPPGTGKT+T + L +D R+LVC
Sbjct: 403 IPNFAQLNSSQSNAVSHVLQ---RPLSLIQGPPGTGKTVTSATIVYHLSKIHKD-RILVC 458
Query: 445 APSNSAADHLLEKI--LGEKAVEVRENEIFRLNAPSRPYEDVNA 486
APSN A DHL K+ LG K V RL A SR EDV +
Sbjct: 459 APSNVAVDHLAAKLRDLGLKVV--------RLTAKSR--EDVES 492
Score = 41 (19.5 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 433 YATREDARLLVCAPSNSAADHLLEKILGEKAVEV 466
Y +DA S + +L KILG + V++
Sbjct: 358 YDRMQDALKKFAIDKKSISGYLYYKILGHQVVDI 391
>UNIPROTKB|G4ND47 [details] [associations]
symbol:MGG_00976 "Regulator-nonsense transcripts 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 EMBL:CM001235 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
KO:K14326 RefSeq:XP_003717973.1 ProteinModelPortal:G4ND47
SMR:G4ND47 EnsemblFungi:MGG_00976T0 GeneID:2674784
KEGG:mgr:MGG_00976 Uniprot:G4ND47
Length = 1105
Score = 461 (167.3 bits), Expect = 3.7e-40, P = 3.7e-40
Identities = 150/453 (33%), Positives = 227/453 (50%)
Query: 390 NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
+LN Q+ +I+ +L P LI GPPGTGKT+T I L A +++LVCAPSN
Sbjct: 451 DLNGSQISAIKAVLS---TPLSLIQGPPGTGKTVTSATIIYHL-AKMNGSQVLVCAPSNV 506
Query: 450 AADHLLEKI--LGEKAVEV----REN-----------EIFRLNAPS---RPYEDVNADHI 489
A D L E++ G K V + RE+ E R+N + + + ++
Sbjct: 507 AVDQLCERVHRTGLKVVRLTAKSREDVESSVSFLALHEQVRMNDTNPELAKLQQLKSELG 566
Query: 490 RFCFFDEQIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGH-------FSHIFLDEAG 542
DE+ FK AA R I+S +A ++ V G F ++ +DE+
Sbjct: 567 ELSSQDEKKFKQLTKAA---EREILS---NADVVCCTCVGAGDPRLAKLKFRNVLIDEST 620
Query: 543 QASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCH 602
Q++EPE M+P+ CK+ VVL GD QLGPVI +++A G+ +S ERL +
Sbjct: 621 QSAEPECMIPLVLGCKQ---VVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL----- 672
Query: 603 GNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF-LPNKEFPVLFF 661
G +L YR HP + PS +FYE L ++F P + P++F+
Sbjct: 673 GLTPI--RLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVADMPMMFW 730
Query: 662 GIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALE 721
G +E S S+ NR E S V +++ + G + DIGV+TPY Q + ++
Sbjct: 731 SNLGNEEISASGTSYLNRTEASNVEKLVTRFFKAG-VKPGDIGVVTPYEGQRSYIVSTMQ 789
Query: 722 SL------YMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNV 775
+ +++V SV+ FQG+E+ I++S VRS + +GFLS+PRR NV
Sbjct: 790 NTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRS-------NESQGIGFLSDPRRLNV 842
Query: 776 AVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSD 808
A+TRA ++IIGNP ++SK WH LL + D
Sbjct: 843 ALTRAKYGVVIIGNPKVLSKHELWHHLLIHFRD 875
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 457 (165.9 bits), Expect = 1.0e-39, P = 1.0e-39
Identities = 147/444 (33%), Positives = 222/444 (50%)
Query: 390 NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
+LN Q+ +++ +L P LI GPPGTGKT+T + L A + + +LVCAPSN
Sbjct: 469 DLNHSQVYAVKTVLQ---RPLSLIQGPPGTGKTVTSATIVYHL-ARQGNGPVLVCAPSNI 524
Query: 450 AADHLLEKI--LGEKAVEVRENEIFRLNAPSR---PYEDV-NADHIRFCFFDEQIF-KCP 502
A D L EKI G K V + +++P + + N D + +Q+ +
Sbjct: 525 AVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETG 584
Query: 503 PLAAL--VCYRIIIST-----YMSASLIYAEGVDRG-------HFSHIFLDEAGQASEPE 548
L++ YR + T M+A +I V G F I +DE+ QA+EPE
Sbjct: 585 ELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPE 644
Query: 549 SMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYV 608
MVP+ K+ ++L GD QLGPV+ ++A G+ +S ERL G
Sbjct: 645 CMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL-----GIRPI- 695
Query: 609 TKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL-PNKEFPVLFFGIQGCD 667
+L YR HP + PS +FYE L + +F P + P+ F+ QG +
Sbjct: 696 -RLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQE 754
Query: 668 EREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ------VLKLNKALE 721
E S S+ NR E + V +I KL G + IG+ITPY Q ++ + +L
Sbjct: 755 EIASSGTSYLNRTEAANVEKITTKLLKAG-AKPDQIGIITPYEGQRSYLVQYMQFSGSLH 813
Query: 722 SLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAI 781
+ ++++ SV+ FQG+E+ II+S VR+ +H +GFL++PRR NVA+TRA
Sbjct: 814 TKLYQEVEIASVDAFQGREKDFIILSCVRAN-EHQG------IGFLNDPRRLNVALTRAR 866
Query: 782 SLLIIIGNPHIVSKDPYWHQLLWY 805
+II+GNP +SK P W+ LL Y
Sbjct: 867 YGVIIVGNPKALSKQPLWNHLLNY 890
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 457 (165.9 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 147/444 (33%), Positives = 222/444 (50%)
Query: 390 NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
+LN Q+ +++ +L P LI GPPGTGKT+T + L A + + +LVCAPSN
Sbjct: 480 DLNHSQVYAVKTVLQ---RPLSLIQGPPGTGKTVTSATIVYHL-ARQGNGPVLVCAPSNI 535
Query: 450 AADHLLEKI--LGEKAVEVRENEIFRLNAPSR---PYEDV-NADHIRFCFFDEQIF-KCP 502
A D L EKI G K V + +++P + + N D + +Q+ +
Sbjct: 536 AVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETG 595
Query: 503 PLAAL--VCYRIIIST-----YMSASLIYAEGVDRG-------HFSHIFLDEAGQASEPE 548
L++ YR + T M+A +I V G F I +DE+ QA+EPE
Sbjct: 596 ELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPE 655
Query: 549 SMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYV 608
MVP+ K+ ++L GD QLGPV+ ++A G+ +S ERL G
Sbjct: 656 CMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL-----GIRPI- 706
Query: 609 TKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL-PNKEFPVLFFGIQGCD 667
+L YR HP + PS +FYE L + +F P + P+ F+ QG +
Sbjct: 707 -RLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQE 765
Query: 668 EREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ------VLKLNKALE 721
E S S+ NR E + V +I KL G + IG+ITPY Q ++ + +L
Sbjct: 766 EIASSGTSYLNRTEAANVEKITTKLLKAG-AKPDQIGIITPYEGQRSYLVQYMQFSGSLH 824
Query: 722 SLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAI 781
+ ++++ SV+ FQG+E+ II+S VR+ +H +GFL++PRR NVA+TRA
Sbjct: 825 TKLYQEVEIASVDAFQGREKDFIILSCVRAN-EHQG------IGFLNDPRRLNVALTRAR 877
Query: 782 SLLIIIGNPHIVSKDPYWHQLLWY 805
+II+GNP +SK P W+ LL Y
Sbjct: 878 YGVIIVGNPKALSKQPLWNHLLNY 901
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 397 (144.8 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 105/285 (36%), Positives = 150/285 (52%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLE 592
F HI +DE+ QASEPE ++P+ K+ V+L GD QLGPV+ ++ G+ +S E
Sbjct: 700 FPHILIDESTQASEPECLIPLMMGAKQ---VILVGDHRQLGPVLLCKKVVDAGLSQSLFE 756
Query: 593 RLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLP 652
RL H E +L YR HP + PS YE +L++ + + P
Sbjct: 757 RLISLG---HHPE----RLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKFPWP 809
Query: 653 NKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ 712
+ P+ FF G +E S S+ N E S +I+ K G+L + IG+ITPY Q
Sbjct: 810 QPKDPMFFFNCTGSEEISSSGTSFINTTEASICEKIVTKFLELGSLPGQ-IGIITPYEGQ 868
Query: 713 -------VLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLG 765
+ K K LY I+V SV+ FQG+E+ II+S VRS ND+ +G
Sbjct: 869 RAYITSHMQKSGKLNLELYK-SIEVASVDSFQGREKDYIILSCVRS----NDYQG---IG 920
Query: 766 FLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNN 810
FL +PRR NVA+TRA LII+GN ++SKDP W+ L+ + + N
Sbjct: 921 FLQDPRRLNVALTRARFGLIILGNAKVLSKDPLWNSLISHFKNKN 965
Score = 124 (48.7 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 35/80 (43%), Positives = 45/80 (56%)
Query: 391 LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQL--YATREDARLLVCAPSN 448
LNE Q+ ++ K+L AP LI GPPGTGKT+ I L Y D ++LVC PSN
Sbjct: 537 LNESQISAVNKVLT---APLSLIQGPPGTGKTVISSFIIHHLVKYVKGND-KVLVCTPSN 592
Query: 449 SAADHLLEKI--LGEKAVEV 466
A D L K+ +G K V +
Sbjct: 593 VAIDQLTGKLHEIGLKVVRL 612
Score = 39 (18.8 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 837 EEEIPQSFQEDNWNQEPFQAENLKP 861
+++ PQ Q+ Q+P Q + +P
Sbjct: 1124 QQQQPQQQQQPQQQQQPQQPQQQQP 1148
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 367 (134.2 bits), Expect = 2.3e-39, Sum P(3) = 2.3e-39
Identities = 101/286 (35%), Positives = 153/286 (53%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLE 592
F + +DE+ QA+EPE ++P+ K+ VVL GD QLGPVI ++A G+ +S E
Sbjct: 650 FRQVLIDESTQATEPECLIPLVLGVKQ---VVLVGDHCQLGPVIMCKKAARAGLAQSLFE 706
Query: 593 RLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF-- 650
RL G + +L YR HP + PS FYE L T ++F
Sbjct: 707 RLVTL-----GIKPI--RLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPW 759
Query: 651 -LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPY 709
+PN+ P+ F+ G +E S S+ NR E + V +++ +G + + IGVITPY
Sbjct: 760 PVPNR--PMFFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQ-IGVITPY 816
Query: 710 RQQ------VLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHC 763
Q + N +L +I+V SV+ FQG+E+ II+S VRS +H
Sbjct: 817 EGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSN-EHQG------ 869
Query: 764 LGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDN 809
+GFL++PRR NVA+TRA ++I+GNP ++SK P W+ LL + ++
Sbjct: 870 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 915
Score = 145 (56.1 bits), Expect = 2.3e-39, Sum P(3) = 2.3e-39
Identities = 69/247 (27%), Positives = 111/247 (44%)
Query: 240 YTSFFKTLLIMEEIQLKEDMRAYDMENVTL-----MRKGLYLSLVVPGLAERRPSLVNGD 294
Y + F L+ +E K + EN+T+ + K V P E LV GD
Sbjct: 321 YQNVFAPLIKLEADYDKMMKESQSKENLTVRWDIGLNKKRVAYFVFPK-EENELRLVPGD 379
Query: 295 FIFAKHAYEDTSSAYQ--GFIHRVEA-DEVHLKFASDFQLNHRDENLYNVQFTYNRVNMR 351
+ +++ + ++Q G + ++ A +EV L+ ++ + + ++V F + +
Sbjct: 380 ELRLRYSGDAVHPSWQSVGHVIKLTAQEEVALELRANQGVPIDVNHGFSVDFVWKSTSFD 439
Query: 352 RLYQATD--AAQELDTEFLFPSESSGIRL---IESNTL-----VPISCNLNEEQMCSIEK 401
R+ A A E + G + + NTL VP LN Q+ +++
Sbjct: 440 RMQGAMKNFAVDETSVSGYIYHQLLGHEVEAQMVRNTLPRRFGVPGLPELNASQVNAVKS 499
Query: 402 ILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKI--L 459
+L P LI GPPGTGKT+T AI+ A + ++LVCAPSN A D L EKI
Sbjct: 500 VLQ---KPISLIQGPPGTGKTVTSA-AIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISAT 555
Query: 460 GEKAVEV 466
G K V +
Sbjct: 556 GLKVVRL 562
Score = 46 (21.3 bits), Expect = 2.3e-39, Sum P(3) = 2.3e-39
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 3 DTVGDDNWGNEWEKRDIGFIDFEDYKSECSYNPSEEDPVQIS 44
DTV D+ E+ + D++D+ S ++ P+ D + I+
Sbjct: 16 DTVADEYTFLEFNTQGDSEFDYQDFGSPTAW-PTPSDSISIA 56
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 453 (164.5 bits), Expect = 2.8e-39, P = 2.8e-39
Identities = 146/444 (32%), Positives = 222/444 (50%)
Query: 390 NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
+LN Q+ +++ +L P LI GPPGTGKT+T + L A + + +LVCAPSN
Sbjct: 450 DLNHSQVYAVKTVLQ---RPLSLIQGPPGTGKTVTSATIVYHL-ARQGNGPVLVCAPSNI 505
Query: 450 AADHLLEKI--LGEKAVEVRENEIFRLNAPSR---PYEDV-NADHIRFCFFDEQIF-KCP 502
A D L EKI G K V + +++P + + N D + +Q+ +
Sbjct: 506 AVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETG 565
Query: 503 PLAAL--VCYRIIIST-----YMSASLIYAEGVDRG-------HFSHIFLDEAGQASEPE 548
L++ YR + T M+A +I V G F I +DE+ QA+EPE
Sbjct: 566 ELSSSDEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPE 625
Query: 549 SMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYV 608
MVP+ K+ ++L GD QLGPV+ ++A G+ +S ERL G
Sbjct: 626 CMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL-----GIRPI- 676
Query: 609 TKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL-PNKEFPVLFFGIQGCD 667
+L YR HP + PS +FYE L + +F P + P+ F+ QG +
Sbjct: 677 -RLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRLKKGFDFQWPQPDKPMFFYVTQGQE 735
Query: 668 EREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ------VLKLNKALE 721
E S S+ NR E + V +I +L G + IG+ITPY Q ++ + +L
Sbjct: 736 EIASSGTSYLNRTEAANVEKITTRLLKAG-AKPDQIGIITPYEGQRSYLVQYMQFSGSLH 794
Query: 722 SLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAI 781
+ ++++ SV+ FQG+E+ II+S VR+ +H +GFL++PRR NVA+TRA
Sbjct: 795 TKLYQEVEIASVDAFQGREKDFIILSCVRAN-EHQG------IGFLNDPRRLNVALTRAR 847
Query: 782 SLLIIIGNPHIVSKDPYWHQLLWY 805
+II+GNP +SK P W+ LL Y
Sbjct: 848 YGVIIVGNPKALSKQPLWNHLLNY 871
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 451 (163.8 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 146/467 (31%), Positives = 227/467 (48%)
Query: 379 IESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATRED 438
+ S+ VP LN Q ++ +L P LI GPPGTGKT+T + L +
Sbjct: 381 LPSDLSVPNLPKLNASQSEAVRAVLS---KPLSLIQGPPGTGKTVTSASVVYHLATMQSR 437
Query: 439 AR-----LLVCAPSNSAADHLLEKI--LGEKAVEV----REN-----EIFRLNAPSRPYE 482
R +LVCAPSN A D L EKI G + V V RE+ L+ + Y+
Sbjct: 438 KRKSHSPVLVCAPSNVAVDQLAEKIHRTGLRVVRVAAKSREDIESSVSFLSLHEQIKNYK 497
Query: 483 ---------DVNADHIRFCFFDEQIFKCPPLAA----LVCYRIIISTYMSASLIYAEGVD 529
+ +++ DE+ + AA L +I T + A +
Sbjct: 498 FNPELQRLLKLRSENNELSIQDEKKLRILVAAAEKELLRAAHVICCTCVGAG---DRRIS 554
Query: 530 RGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKS 589
+ F + +DEA QASEPE M+P+ K+ VVL GD QLGPV+ +++ + +S
Sbjct: 555 KYKFRSVLIDEATQASEPECMIPLVLGAKQ---VVLVGDHQQLGPVVMNKKVALASLSQS 611
Query: 590 YLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLN 649
ERL GN + +LV YR HP + PS FYE L S +++
Sbjct: 612 LFERLIIL-----GNSPF--RLVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERIARHVD 664
Query: 650 FLP--NKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVIT 707
F P + P++F+ G +E S S+ NR E S +I+ + N+ E IG++T
Sbjct: 665 F-PWIQPDSPLMFYANFGQEELSASGTSFLNRTEASTCEKIVTTFLRS-NVLPEQIGIVT 722
Query: 708 PY---RQ---QVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRK 761
PY R Q ++ N +++ ++V SV+ FQG+E+ II+S VRS+ +H
Sbjct: 723 PYDGQRSYIVQYMQNNGSMQKDLYKAVEVASVDAFQGREKDFIILSCVRSS-EHQG---- 777
Query: 762 HCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSD 808
+GF+++PRR NVA+TRA +I++GNP +++K W+ + +C +
Sbjct: 778 --IGFVNDPRRLNVALTRAKYGVIVLGNPKVLAKHALWYHFVLHCKE 822
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 459 (166.6 bits), Expect = 5.8e-39, Sum P(2) = 5.8e-39
Identities = 147/450 (32%), Positives = 224/450 (49%)
Query: 390 NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
+LN Q+ +++ +L P LI GPPGTGKT+T + L A + + +LVCAPSN
Sbjct: 476 DLNHSQVYAVKTVLQ---RPLSLIQGPPGTGKTVTSATIVYHL-ARQGNGPVLVCAPSNI 531
Query: 450 AADHLLEKI--LGEKAVEVRENEIFRLNAPSR---PYEDV-NADHIRFCFFDEQIF-KCP 502
A D L EKI G K V + +++P + + N D + +Q+ +
Sbjct: 532 AVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETG 591
Query: 503 PLAAL--VCYRIIIST-----YMSASLIYAEGVDRG-------HFSHIFLDEAGQASEPE 548
L++ YR + T M+A +I V G F I +DE+ QA+EPE
Sbjct: 592 ELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPE 651
Query: 549 SMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYV 608
MVP+ K+ ++L GD QLGPV+ ++A G+ +S ERL G
Sbjct: 652 CMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL-----GIRPI- 702
Query: 609 TKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL-PNKEFPVLFFGIQGCD 667
+L YR HP + PS +FYE L + +F P + P+ F+ QG +
Sbjct: 703 -RLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQE 761
Query: 668 EREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ------VLKLNKALE 721
E S S+ NR E + V +I KL G + IG+ITPY Q ++ + +L
Sbjct: 762 EIASSGTSYLNRTEAANVEKITTKLLKAG-AKPDQIGIITPYEGQRSYLVQYMQFSGSLH 820
Query: 722 SLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAI 781
+ ++++ SV+ FQG+E+ II+S VR+ +H +GFL++PRR NVA+TRA
Sbjct: 821 TKLYQEVEIASVDAFQGREKDFIILSCVRAN-EHQG------IGFLNDPRRLNVALTRAR 873
Query: 782 SLLIIIGNPHIVSKDPYWHQLLWYCSDNNS 811
+II+GNP +SK P W+ LL Y + +
Sbjct: 874 YGVIIVGNPKALSKQPLWNHLLSYYKEQKA 903
Score = 41 (19.5 bits), Expect = 5.8e-39, Sum P(2) = 5.8e-39
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 105 DSGTNRGFVEFFTLEERMIQPGQTLTIWL 133
D G N+ + FFTL + + IWL
Sbjct: 329 DLGLNKKRIAFFTLPKTDSGNEDLVIIWL 357
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 457 (165.9 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 147/444 (33%), Positives = 222/444 (50%)
Query: 390 NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
+LN Q+ +++ +L P LI GPPGTGKT+T + L A + + +LVCAPSN
Sbjct: 479 DLNHSQVYAVKTVLQ---RPLSLIQGPPGTGKTVTSATIVYHL-ARQGNGPVLVCAPSNI 534
Query: 450 AADHLLEKI--LGEKAVEVRENEIFRLNAPSR---PYEDV-NADHIRFCFFDEQIF-KCP 502
A D L EKI G K V + +++P + + N D + +Q+ +
Sbjct: 535 AVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETG 594
Query: 503 PLAAL--VCYRIIIST-----YMSASLIYAEGVDRG-------HFSHIFLDEAGQASEPE 548
L++ YR + T M+A +I V G F I +DE+ QA+EPE
Sbjct: 595 ELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPE 654
Query: 549 SMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYV 608
MVP+ K+ ++L GD QLGPV+ ++A G+ +S ERL G
Sbjct: 655 CMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL-----GIRPI- 705
Query: 609 TKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL-PNKEFPVLFFGIQGCD 667
+L YR HP + PS +FYE L + +F P + P+ F+ QG +
Sbjct: 706 -RLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQE 764
Query: 668 EREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ------VLKLNKALE 721
E S S+ NR E + V +I KL G + IG+ITPY Q ++ + +L
Sbjct: 765 EIASSGTSYLNRTEAANVEKITTKLLKAG-AKPDQIGIITPYEGQRSYLVQYMQFSGSLH 823
Query: 722 SLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAI 781
+ ++++ SV+ FQG+E+ II+S VR+ +H +GFL++PRR NVA+TRA
Sbjct: 824 TKLYQEVEIASVDAFQGREKDFIILSCVRAN-EHQG------IGFLNDPRRLNVALTRAR 876
Query: 782 SLLIIIGNPHIVSKDPYWHQLLWY 805
+II+GNP +SK P W+ LL Y
Sbjct: 877 YGVIIVGNPKALSKQPLWNHLLNY 900
Score = 38 (18.4 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 105 DSGTNRGFVEFFTLEERMIQPGQTLTIWL 133
D G N+ + +FTL + + IWL
Sbjct: 332 DLGLNKKRIAYFTLPKTDSGNEDLVIIWL 360
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 457 (165.9 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 147/444 (33%), Positives = 222/444 (50%)
Query: 390 NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
+LN Q+ +++ +L P LI GPPGTGKT+T + L A + + +LVCAPSN
Sbjct: 481 DLNHSQVYAVKTVLQ---RPLSLIQGPPGTGKTVTSATIVYHL-ARQGNGPVLVCAPSNI 536
Query: 450 AADHLLEKI--LGEKAVEVRENEIFRLNAPSR---PYEDV-NADHIRFCFFDEQIF-KCP 502
A D L EKI G K V + +++P + + N D + +Q+ +
Sbjct: 537 AVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETG 596
Query: 503 PLAAL--VCYRIIIST-----YMSASLIYAEGVDRG-------HFSHIFLDEAGQASEPE 548
L++ YR + T M+A +I V G F I +DE+ QA+EPE
Sbjct: 597 ELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPE 656
Query: 549 SMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYV 608
MVP+ K+ ++L GD QLGPV+ ++A G+ +S ERL G
Sbjct: 657 CMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL-----GIRPI- 707
Query: 609 TKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL-PNKEFPVLFFGIQGCD 667
+L YR HP + PS +FYE L + +F P + P+ F+ QG +
Sbjct: 708 -RLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQE 766
Query: 668 EREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ------VLKLNKALE 721
E S S+ NR E + V +I KL G + IG+ITPY Q ++ + +L
Sbjct: 767 EIASSGTSYLNRTEAANVEKITTKLLKAG-AKPDQIGIITPYEGQRSYLVQYMQFSGSLH 825
Query: 722 SLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAI 781
+ ++++ SV+ FQG+E+ II+S VR+ +H +GFL++PRR NVA+TRA
Sbjct: 826 TKLYQEVEIASVDAFQGREKDFIILSCVRAN-EHQG------IGFLNDPRRLNVALTRAR 878
Query: 782 SLLIIIGNPHIVSKDPYWHQLLWY 805
+II+GNP +SK P W+ LL Y
Sbjct: 879 YGVIIVGNPKALSKQPLWNHLLNY 902
Score = 38 (18.4 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 105 DSGTNRGFVEFFTLEERMIQPGQTLTIWL 133
D G N+ + +FTL + + IWL
Sbjct: 334 DLGLNKKRIAYFTLPKTDSGNEDLVIIWL 362
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 457 (165.9 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 147/444 (33%), Positives = 222/444 (50%)
Query: 390 NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
+LN Q+ +++ +L P LI GPPGTGKT+T + L A + + +LVCAPSN
Sbjct: 482 DLNHSQVYAVKTVLQ---RPLSLIQGPPGTGKTVTSATIVYHL-ARQGNGPVLVCAPSNI 537
Query: 450 AADHLLEKI--LGEKAVEVRENEIFRLNAPSR---PYEDV-NADHIRFCFFDEQIF-KCP 502
A D L EKI G K V + +++P + + N D + +Q+ +
Sbjct: 538 AVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETG 597
Query: 503 PLAAL--VCYRIIIST-----YMSASLIYAEGVDRG-------HFSHIFLDEAGQASEPE 548
L++ YR + T M+A +I V G F I +DE+ QA+EPE
Sbjct: 598 ELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPE 657
Query: 549 SMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYV 608
MVP+ K+ ++L GD QLGPV+ ++A G+ +S ERL G
Sbjct: 658 CMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL-----GIRPI- 708
Query: 609 TKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL-PNKEFPVLFFGIQGCD 667
+L YR HP + PS +FYE L + +F P + P+ F+ QG +
Sbjct: 709 -RLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQE 767
Query: 668 EREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ------VLKLNKALE 721
E S S+ NR E + V +I KL G + IG+ITPY Q ++ + +L
Sbjct: 768 EIASSGTSYLNRTEAANVEKITTKLLKAG-AKPDQIGIITPYEGQRSYLVQYMQFSGSLH 826
Query: 722 SLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAI 781
+ ++++ SV+ FQG+E+ II+S VR+ +H +GFL++PRR NVA+TRA
Sbjct: 827 TKLYQEVEIASVDAFQGREKDFIILSCVRAN-EHQG------IGFLNDPRRLNVALTRAR 879
Query: 782 SLLIIIGNPHIVSKDPYWHQLLWY 805
+II+GNP +SK P W+ LL Y
Sbjct: 880 YGVIIVGNPKALSKQPLWNHLLNY 903
Score = 38 (18.4 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 105 DSGTNRGFVEFFTLEERMIQPGQTLTIWL 133
D G N+ + +FTL + + IWL
Sbjct: 335 DLGLNKKRIAYFTLPKTDSGNEDLVIIWL 363
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 353 (129.3 bits), Expect = 2.3e-38, Sum P(3) = 2.3e-38
Identities = 98/289 (33%), Positives = 150/289 (51%)
Query: 536 IFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLF 595
+ +DE+ QA+EPE +V I ++ +VL GD QLGPV+ ++A G+ +S ERL
Sbjct: 607 VLIDESTQATEPEILVSIMRGVRQ---LVLVGDHCQLGPVVICKKAAIAGLSQSLFERLV 663
Query: 596 ECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEEL---IACKDESISCTAYLNFLP 652
G + +L YR HP + PS +FY+ L + D ++ + P
Sbjct: 664 LL-----GIRPF--RLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWPKP 716
Query: 653 NKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ 712
NK P F+ G +E S S+ NR E + V +++ KL G + IGVIT Y Q
Sbjct: 717 NK--PAFFWHCSGSEELSASGTSFLNRTEAANVEKLVSKLIKAG-VQPHQIGVITSYEGQ 773
Query: 713 ------VLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGF 766
+ L S ++++ SV+ FQG+E+ IIV+ VRS ND +GF
Sbjct: 774 RSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRS----NDILG---IGF 826
Query: 767 LSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLL-WYCSDNNSYQG 814
LS+PRR NVA+TRA L+++GN ++++ WH+L+ Y S Y+G
Sbjct: 827 LSDPRRLNVAITRAKYGLVLVGNAKVLARHDLWHELINHYKSKEMLYEG 875
Score = 153 (58.9 bits), Expect = 2.3e-38, Sum P(3) = 2.3e-38
Identities = 56/215 (26%), Positives = 95/215 (44%)
Query: 270 MRKGLYLSLVVPGLAERRPSLVNGDFIFAKHAYEDTSSAYQ--GFIHRV---EADEVHLK 324
+R+ + +P A+ L GD + KH+ S + G + ++ DEV ++
Sbjct: 309 LRQSVLAFFHLPQFADGVMKLAKGDELRLKHSQTVDGSEWTKIGSVFKIPDNHGDEVGIE 368
Query: 325 FASDFQLNHRDENL-YNVQFTYNRVNMRRLYQATDAA---QELDTEFLF------PSESS 374
+ + + + V +N R Y+A A + + +L+ P+E
Sbjct: 369 IRGAVDKSVMESRIMFTVDVVWNATTFERQYKALAALLNDSKAISPYLYQKLLGHPAEEM 428
Query: 375 GIRL-IESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLY 433
++ + V LN QM +++++L P LI GPPGTGKT+ + L
Sbjct: 429 MLKFDLPRRLSVAGLPELNSSQMQAVKQVLT---RPLSLIQGPPGTGKTVVSATIVYHL- 484
Query: 434 ATREDARLLVCAPSNSAADHLLEKI--LGEKAVEV 466
+ + +LVC+PSN A DHL EKI G K V +
Sbjct: 485 VQKTEGNVLVCSPSNIAVDHLAEKIHKTGLKVVRL 519
Score = 40 (19.1 bits), Expect = 2.3e-38, Sum P(3) = 2.3e-38
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 11 GNEWEKRDIGFIDFEDYKSECSYNPSEEDPVQ 42
G + D+ F D ED +S+ + +EE Q
Sbjct: 57 GTDGTTNDLPFHDVEDDESDSEKSLTEEQHEQ 88
Score = 39 (18.8 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 442 LVCAPSNSAADHLLEKI 458
++C +SAAD L KI
Sbjct: 586 VICCTCSSAADARLSKI 602
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 441 (160.3 bits), Expect = 4.8e-38, P = 4.8e-38
Identities = 147/450 (32%), Positives = 217/450 (48%)
Query: 386 PISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCA 445
P LN Q ++ +L P LI GPPGTGKT+T I L + ++LVCA
Sbjct: 436 PKLTELNVSQTNAVRTVLQ---RPLSLIQGPPGTGKTVTSATIIYHLSKLNKQ-KILVCA 491
Query: 446 PSNSAADHLLEKI--LGEKAVEVR-------ENEIFRLNAPSRPYEDVNADHIRFCFFDE 496
PSN A DHL K+ LG V + E+ + L + + + +
Sbjct: 492 PSNVAVDHLAAKLDLLGLNVVRLTAKSREDVESSVSHLALHNLVNSNAKGELKKLIKLKN 551
Query: 497 QIFKCPPLAALVCYRIIISTYMS----ASLIYAEGV---DRG----HFSHIFLDEAGQAS 545
Q+ + ++ S+ M A ++ V DR F + +DE+ QAS
Sbjct: 552 QVGELSVADTNNYLKLSRSSEMKVLNKAEVVCCTCVGAADRRLSQFRFKTVLIDESTQAS 611
Query: 546 EPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNE 605
EPE ++PI K+ V+L GD QLGPVI ++A G+ +S ERL G+
Sbjct: 612 EPEVLIPIVKGAKQ---VILVGDHQQLGPVILDKKAADAGLKQSLFERLVFL-----GH- 662
Query: 606 NYVTKLVRNYRSHPQILHLPSKLFYEEEL---IACKDESISCTAYLNFLPNKEFPVLFFG 662
+L YR HP + PS +FYE L + D I + + P + P++F+
Sbjct: 663 -VPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFP--WPVIDTPMMFWA 719
Query: 663 IQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ------VLKL 716
G +E S S+ NR+E V +II KL G + E IGVITPY Q + +
Sbjct: 720 NYGREELSASGNSYLNRVEAMNVEKIITKLFKDG-IKPEQIGVITPYEGQRAYLVQFMSV 778
Query: 717 NKAL---ESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRF 773
N L Y+ ++++ SV+ FQG+E+ II+S VR+ ND +GFLS+PRR
Sbjct: 779 NSTLLDKRDQYL-NVEITSVDAFQGREKDFIILSCVRA----ND---SQSIGFLSDPRRL 830
Query: 774 NVAVTRAISLLIIIGNPHIVSKDPYWHQLL 803
NVA+TRA L+I+GNP + ++ W+ LL
Sbjct: 831 NVALTRAKYGLVILGNPRSLCRNRLWNHLL 860
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 441 (160.3 bits), Expect = 4.8e-38, P = 4.8e-38
Identities = 147/450 (32%), Positives = 217/450 (48%)
Query: 386 PISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCA 445
P LN Q ++ +L P LI GPPGTGKT+T I L + ++LVCA
Sbjct: 436 PKLTELNVSQTNAVRTVLQ---RPLSLIQGPPGTGKTVTSATIIYHLSKLNKQ-KILVCA 491
Query: 446 PSNSAADHLLEKI--LGEKAVEVR-------ENEIFRLNAPSRPYEDVNADHIRFCFFDE 496
PSN A DHL K+ LG V + E+ + L + + + +
Sbjct: 492 PSNVAVDHLAAKLDLLGLNVVRLTAKSREDVESSVSHLALHNLVNSNAKGELKKLIKLKN 551
Query: 497 QIFKCPPLAALVCYRIIISTYMS----ASLIYAEGV---DRG----HFSHIFLDEAGQAS 545
Q+ + ++ S+ M A ++ V DR F + +DE+ QAS
Sbjct: 552 QVGELSVADTNNYLKLSRSSEMKVLNKAEVVCCTCVGAADRRLSQFRFKTVLIDESTQAS 611
Query: 546 EPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNE 605
EPE ++PI K+ V+L GD QLGPVI ++A G+ +S ERL G+
Sbjct: 612 EPEVLIPIVKGAKQ---VILVGDHQQLGPVILDKKAADAGLKQSLFERLVFL-----GH- 662
Query: 606 NYVTKLVRNYRSHPQILHLPSKLFYEEEL---IACKDESISCTAYLNFLPNKEFPVLFFG 662
+L YR HP + PS +FYE L + D I + + P + P++F+
Sbjct: 663 -VPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFP--WPVIDTPMMFWA 719
Query: 663 IQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ------VLKL 716
G +E S S+ NR+E V +II KL G + E IGVITPY Q + +
Sbjct: 720 NYGREELSASGNSYLNRVEAMNVEKIITKLFKDG-IKPEQIGVITPYEGQRAYLVQFMSV 778
Query: 717 NKAL---ESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRF 773
N L Y+ ++++ SV+ FQG+E+ II+S VR+ ND +GFLS+PRR
Sbjct: 779 NSTLLDKRDQYL-NVEITSVDAFQGREKDFIILSCVRA----ND---SQSIGFLSDPRRL 830
Query: 774 NVAVTRAISLLIIIGNPHIVSKDPYWHQLL 803
NVA+TRA L+I+GNP + ++ W+ LL
Sbjct: 831 NVALTRAKYGLVILGNPRSLCRNRLWNHLL 860
>UNIPROTKB|F1MKC7 [details] [associations]
symbol:Bt.110099 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:DAAA02049790 EMBL:DAAA02049791
EMBL:DAAA02049792 EMBL:DAAA02049793 EMBL:DAAA02049794
EMBL:DAAA02049795 EMBL:DAAA02049796 EMBL:DAAA02049797
EMBL:DAAA02049798 EMBL:DAAA02049799 IPI:IPI00698970
Ensembl:ENSBTAT00000006233 Uniprot:F1MKC7
Length = 1941
Score = 396 (144.5 bits), Expect = 3.8e-37, Sum P(3) = 3.8e-37
Identities = 129/413 (31%), Positives = 208/413 (50%)
Query: 403 LGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAP--SNSAADHLLEKILG 460
+ LKG PY I G+G+ V +L+ E RL V SN+ + +
Sbjct: 667 MNLKG--PYRISNIFGSGRR---VAHVLE----EESQRLAVVTSILSNNILGVFIT-VYR 716
Query: 461 EKAVEVRENEIF--RLNAPSRPYEDVNADHIRFCFFDE--QIFKCPPLAALVCYRIIIST 516
AV+ E+ R+ +R + V+ ++C F+ P ++ +R+++ T
Sbjct: 717 HPAVQPSSPELKMQRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVT 776
Query: 517 YMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVI 576
++ + ++ G F+HI LDEA QA E E+++P++ + T VVLAGD MQL P +
Sbjct: 777 LNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLA-LATRHTRVVLAGDHMQLSPFV 835
Query: 577 YSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIA 636
YS A + S L+RL+E P L NYRSH I++ S+LFYE +L+A
Sbjct: 836 YSEFARERNLHVSLLDRLYEHYP---AEFPCRILLCENYRSHEAIINYTSELFYEGKLMA 892
Query: 637 CKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKL---- 692
+ A+ F +P+ FF +G D +E ++ +++N EV +VVE +++L
Sbjct: 893 SGKQP----AHKEF-----YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKW 943
Query: 693 -TSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRS 751
+ G L + IGV+TPY QV ++ L + D+ V V QG++ +V+ +STVR+
Sbjct: 944 PVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRT 1003
Query: 752 --TIKHND--FDRKHCL----------GFLSNPRRFNVAVTRAISLLIIIGNP 790
T KH +K L GFLSN + N A+TRA SL+ ++G+P
Sbjct: 1004 RHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDP 1056
Score = 97 (39.2 bits), Expect = 3.8e-37, Sum P(3) = 3.8e-37
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 765 GFLSNPRRFNVAVTRAISLLIIIGNPHIVSK----DPYWHQLLWYCSDNNSYQG 814
GFLSN + N A+TRA SL+ ++G+P + +W + + C +NNS G
Sbjct: 1031 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHG 1084
Score = 50 (22.7 bits), Expect = 3.8e-37, Sum P(3) = 3.8e-37
Identities = 19/69 (27%), Positives = 30/69 (43%)
Query: 127 QTLTIWLSCKPKGIGLHTTVLQFDVEDRIERVVFLLAED---KISQSLASKRPYSRGGRK 183
QT T L+CKP + L L +D ++ + A D ++SQ + GG+
Sbjct: 279 QTWTFALTCKPARM-LCRVALLYDAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKM 337
Query: 184 KQFSVDKYV 192
+D YV
Sbjct: 338 APNGLDHYV 346
>TAIR|locus:2056896 [details] [associations]
symbol:AT2G03270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AC005313 EMBL:AC006284 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 UniGene:At.10455 UniGene:At.71239 EMBL:AY045820
EMBL:AY091361 IPI:IPI00521943 PIR:T02699 RefSeq:NP_565299.1
ProteinModelPortal:O81047 SMR:O81047 STRING:O81047 PaxDb:O81047
PRIDE:O81047 EnsemblPlants:AT2G03270.1 GeneID:814856
KEGG:ath:AT2G03270 TAIR:At2g03270 InParanoid:O81047 OMA:GHPSRVS
PhylomeDB:O81047 ProtClustDB:CLSN2687941 ArrayExpress:O81047
Genevestigator:O81047 Uniprot:O81047
Length = 639
Score = 305 (112.4 bits), Expect = 3.9e-37, Sum P(2) = 3.9e-37
Identities = 92/307 (29%), Positives = 152/307 (49%)
Query: 513 IISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQL 572
+I T ++ +L +D F + +DE QA E + + K + +LAGD +QL
Sbjct: 345 VILTTLTGAL--TRKLDNRTFDLVIIDEGAQALEVACWIALL----KGSRCILAGDHLQL 398
Query: 573 GPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEE 632
P I S EAE G+G++ ERL + +G+E + L YR H I++ SK Y+
Sbjct: 399 PPTIQSAEAERKGLGRTLFERLADL----YGDE-IKSMLTVQYRMHELIMNWSSKELYDN 453
Query: 633 ELIACKDESISCTAYLNFLPNK---EFPVLFFGIQGCD--EREGSNPSWFNRIEVSKVVE 687
++ A + L + E +L GCD E++ S +N E +
Sbjct: 454 KITAHSSVASHMLFDLENVTKSSSTEATLLLVDTAGCDMEEKKDEEESTYNEGEAEVAMA 513
Query: 688 IIQKLTSTGNLSEEDIGVITPYRQQV--LKLNKALESLYMPDIKVGSVEQFQGQERQVII 745
++L +G + DIG+ITPY QV L++ + E + D+++ +V+ FQG+E++ II
Sbjct: 514 HAKRLMESG-VQPSDIGIITPYAAQVMLLRILRGKEEK-LKDMEISTVDGFQGREKEAII 571
Query: 746 VSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWY 805
+S VRS K +GFL + RR NVAVTR+ I+ + VS D + +++ Y
Sbjct: 572 ISMVRSNSKKE-------VGFLKDQRRMNVAVTRSRRQCCIVCDTETVSSDAFLKRMIEY 624
Query: 806 CSDNNSY 812
++ Y
Sbjct: 625 FEEHGEY 631
Score = 176 (67.0 bits), Expect = 3.9e-37, Sum P(2) = 3.9e-37
Identities = 57/192 (29%), Positives = 93/192 (48%)
Query: 292 NGDFIFAKHAYEDTSSA--YQGFIHRVEADEVHLKF--ASDFQLNH--RDENLYNVQFTY 345
N D + K D S+ QG ++R++ + + F + LN R E L N + TY
Sbjct: 83 NHDVVVLKLNKSDLGSSPLAQGVVYRLKDSSITVVFDEVPEEGLNTSLRLEKLAN-EVTY 141
Query: 346 NRVN--MRRLYQATDAAQELD-TEFLFPSESSGIRLIESNTLVPISCNLNEEQMCSIEKI 402
R+ + +L + D LF + + + P + NL++ Q +I K
Sbjct: 142 RRMKDTLIQLSKGVLRGPASDLVPVLFGERQPSVSKKDVKSFTPFNKNLDQSQKDAITKA 201
Query: 403 LGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEK 462
L K +L++GPPGTGKT T+VE +LQ + +++L CA SN A D+++E+++ K
Sbjct: 202 LSSKDV--FLLHGPPGTGKTTTVVEIVLQ--EVKRGSKILACAASNIAVDNIVERLVPHK 257
Query: 463 AVEVRENEIFRL 474
VR RL
Sbjct: 258 VKLVRVGHPARL 269
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 440 (159.9 bits), Expect = 7.6e-36, Sum P(2) = 7.6e-36
Identities = 130/423 (30%), Positives = 219/423 (51%)
Query: 391 LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSA 450
LNE Q+ +I + L + LI GPPGTGKT T+ I + A D ++LVC PS++A
Sbjct: 3556 LNESQLAAINE--SLVHSSITLIQGPPGTGKTHTITSLISIILAINPDFKILVCGPSHAA 3613
Query: 451 ADHLLEKILGEKAVEVRENE----IFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPPLAA 506
D + ++++ + + R + + R+ + + D C F+ ++ + +
Sbjct: 3614 VDEVAKRVIIKGLLNDRGEKYIPTMVRIGLKDNIQDPIVHD---ICVFNRRLDEKKMI-- 3668
Query: 507 LVCYRIIISTYMSASLIYAEGVDRGHFSH--IFLDEAGQASEPESMVPISSYCKKDTVVV 564
L I ST +SAS + + F + +DEA Q+ E ++P+S K ++
Sbjct: 3669 LEHSSICFST-LSAS---GSNLVQSSFKPNVVIVDEATQSCETSCIIPLSLGAKSMKKLI 3724
Query: 565 LAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHL 624
L GDP+QL P I+S+E+ G+G S ERL + P V+ L YR HP I
Sbjct: 3725 LVGDPVQLPPTIFSKESIHCGLGISLFERLSKVLP--------VSMLNVQYRMHPLISKF 3776
Query: 625 PSKLFYEEELIACKDESISCTAY-LNFLPNKEFPVL-FFGIQGCDEREGSNPSWFNRIEV 682
PS FY + ++ D +S AY L F N+++ + FF + E G S N++E+
Sbjct: 3777 PSSQFYHD-ILKDGDNVVSSDAYSLRFHENQDYGAIRFFDVTDSREERGKT-SIKNQLEI 3834
Query: 683 SKVVEIIQKLTSTGNLSEE-DIGVITPYRQQVLKLNKALESLYMP-DIKVGSVEQFQGQE 740
+ V +I+KLT +++ G++TPY+ Q ++ A + L + +I++ +++ FQG E
Sbjct: 3835 TMVFTLIKKLTQDHPETKQYSFGIVTPYKLQRKEIEDAYKQLNLSLNIEIKTIDSFQGSE 3894
Query: 741 RQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWH 800
+ ++I+S VR+ +GFLS+ RR NV++TRA L IIGN ++ D W
Sbjct: 3895 KDIMIMSCVRN----------ESIGFLSDRRRINVSITRAKYGLFIIGNATLLKLDRTWG 3944
Query: 801 QLL 803
+L+
Sbjct: 3945 ELI 3947
Score = 48 (22.0 bits), Expect = 7.6e-36, Sum P(2) = 7.6e-36
Identities = 24/118 (20%), Positives = 48/118 (40%)
Query: 150 DVEDRIERVVFLLAEDKISQSLASKRPYSRGGRKKQFS-VDKYVVGSRPARYRGQIYQNR 208
D D +E ++LAE K Q ++ + +KK F ++ ++ Q+Y N+
Sbjct: 34 DFNDELENAKYVLAESKDEQDRTFEQRIA-AIKKKAFDDFNELSESDEASQLDFQLY-NK 91
Query: 209 LPRYDIPNHIRELIERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMEN 266
R + ++K + D G+ K+ K++ ++ Q + DM N
Sbjct: 92 FIRLRVMIEFSNEYQKKCLGDFF--GMDAKSKDQLLKSMNEIKVFQNSAPLNFPDMIN 147
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 424 (154.3 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 158/563 (28%), Positives = 265/563 (47%)
Query: 331 LNHRDENLYNVQFTYNRVNMRRLYQATDAAQELDTEFLFPSESSGIRLIESNTLVPISCN 390
L +D + VQF + + R ++A DA E+ + P + + P S
Sbjct: 704 LQAQDSPVLEVQFQIDPLIFRFWHRAVDALPEVC--LVVPDLPACT--LPHPWPTPPSFR 759
Query: 391 LNEEQMCSIEKILGLK--GA---PPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCA 445
N +Q ++ I G + G+ PP LIYGP GTGKT TL A L++ + ++L+C
Sbjct: 760 GNHKQKLAVGLIAGRRPEGSKHIPPLLIYGPFGTGKTYTLAMAALEV-VQQPHTKVLICT 818
Query: 446 PSNSAAD-HLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFF--DEQIFKCP 502
+NSAAD ++ E G +E R+ RP ++ +++C D Q F+ P
Sbjct: 819 HTNSAADIYVREYFHGYVNSGHQEAAPLRVMYADRPPRQTDSTTLQYCCLTEDRQAFRPP 878
Query: 503 PLAALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTV 562
L+ +R++++T A + V G FSHIF+DEA Q E E+++P+S Y T
Sbjct: 879 TFPELLRHRLVVTTTSQARELQ---VPAGFFSHIFIDEAAQMLECEALIPLS-YALTLTR 934
Query: 563 VVLAGDPMQLGPVIYSREAETYGMGKSYLERLF-ECEPYCHGNENYVTKLV--RNYRSHP 619
VVLAGD MQ+ P ++S + G L RLF + H + +++V NYRS
Sbjct: 935 VVLAGDHMQVTPRLFSVPRDK-AAGHMLLHRLFLYYQQEVHKIAQH-SRIVFHENYRSTA 992
Query: 620 QILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNR 679
I++ S+ FY K I + + P + +P++F + G E++ S SW N
Sbjct: 993 AIINFVSRHFY-----VAKGNPIQASGKVPRHP-QHYPLMFCHVAGSPEQDMSRTSWLNS 1046
Query: 680 IEVSKVVEIIQKLTST-----GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVE 734
EV++VVE +Q++ +T G + I ++ + QV L + L + ++ VGS E
Sbjct: 1047 AEVTQVVEKVQEIYNTWPHCWGPREQRHICAVS-HGAQVSALRQELRRRNLGEVSVGSFE 1105
Query: 735 QFQGQERQVIIVSTV--RSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHI 792
G+E +V+++S+V R+++ F + PR N +TRA S L+ +G+
Sbjct: 1106 ILPGREFRVVVLSSVHNRNSLLSPGAPTSE---FFTEPRVLNTVMTRAQSQLVAVGDAVA 1162
Query: 793 VSKD----PYWHQLLWYCSDNNSY--QGCALPEREE-FADEDPTAA---ECWNHEEEIPQ 842
+ W + C +++S + +L + E+ A A+ W+ E E
Sbjct: 1163 LCSSGACRKLWKNFIRECIEHHSIFPEDLSLEQIEQGVAQRQNWASLMLRAWDTEAEHKP 1222
Query: 843 SFQEDNWNQEPFQAENLKPVKDE 865
+ Q+ Q P + VK E
Sbjct: 1223 TAQD---LQRPIAEGTMVTVKAE 1242
Score = 367 (134.2 bits), Expect = 2.0e-28, Sum P(3) = 2.0e-28
Identities = 100/289 (34%), Positives = 152/289 (52%)
Query: 536 IFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLF 595
I +DEAG A+EPE+++P+ + K + VV+L GD QL PV+ + + GM +S ER
Sbjct: 2652 ILIDEAGMATEPETLIPLVCFSKTEKVVLL-GDHKQLRPVVKNEQLRNLGMDRSLFER-- 2708
Query: 596 ECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKE 655
Y H + L YR H I PS FY +L D + L + +
Sbjct: 2709 ----Y-HRD---AIMLDTQYRMHKDICSFPSMEFYGGKLKTWSDLKRP-PSLLGHVGKQS 2759
Query: 656 FPVLFFGIQGCDER------EGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPY 709
PV+F +QG +++ EG+ S N EV++VV II++LT + +D+ V+TPY
Sbjct: 2760 CPVIFGSVQGYEQKLLVSTEEGNENSRANPEEVTEVVRIIKQLTLDRTVDPKDVAVLTPY 2819
Query: 710 RQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDR-------KH 762
Q +++ L + + V S+ + QG E + +IVSTVR T +D D+ K
Sbjct: 2820 NAQAAAISRGLMQRGVTGVTVTSITKSQGSEWRYVIVSTVR-TCPRSDMDQRPTKSWLKK 2878
Query: 763 CLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNS 811
LGF+ +P + NVA+TRA L IIG+ ++ P WH+LL +C NS
Sbjct: 2879 FLGFVVDPHQVNVAITRAQEGLCIIGDHLLLRCCPLWHRLLGFCEAQNS 2927
Score = 61 (26.5 bits), Expect = 2.0e-28, Sum P(3) = 2.0e-28
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATR-----------EDARL-----LVCAPSNSAADHLL 455
+I GPPGTGKT+ + + + E+ +L L C PSN + D +L
Sbjct: 2465 VIQGPPGTGKTVVGFHIVYWFHRSNQEQMPTGSSPSEEEKLGGPCVLYCGPSNKSVD-VL 2523
Query: 456 EKILGEKAVEVRENEIF 472
+L K E+R ++
Sbjct: 2524 GGLLLRKKTEMRPLRVY 2540
Score = 39 (18.8 bits), Expect = 2.0e-28, Sum P(3) = 2.0e-28
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 29 SECSYNPSEEDPV 41
++C Y P +ED V
Sbjct: 1735 ADCYYEPPDEDSV 1747
Score = 37 (18.1 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 255 LKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSLVN 292
LKE + VT+ GL ++V P +++ +N
Sbjct: 1303 LKELLDESRQMTVTVREDGLLDTMVCPASSQKARQYIN 1340
>DICTYBASE|DDB_G0271732 [details] [associations]
symbol:DDB_G0271732 "AN1-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51061
SMART:SM00382 dictyBase:DDB_G0271732 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000006 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
OMA:HARQRIS RefSeq:XP_645520.1 ProteinModelPortal:Q75JA0
PRIDE:Q75JA0 EnsemblProtists:DDB0232283 GeneID:8618149
KEGG:ddi:DDB_G0271732 InParanoid:Q75JA0 ProtClustDB:CLSZ2846906
Uniprot:Q75JA0
Length = 1024
Score = 339 (124.4 bits), Expect = 4.9e-35, Sum P(3) = 4.9e-35
Identities = 106/325 (32%), Positives = 162/325 (49%)
Query: 512 IIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQ 571
+I+ST AS +G+D +F + +DE QA E +PI +K ++LAGD Q
Sbjct: 399 VILSTNTGASDSSLKGID--NFDWVVIDECAQALEASCWIPI----QKGNKLLLAGDHQQ 452
Query: 572 LGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVR-NYRSHPQILHLPSKLFY 630
L P I+S EA G+ + ER+ + +G++ V++L+ YR + +I+ S FY
Sbjct: 453 LPPTIHSMEAAKMGLSITLFERIIKQ----YGDQ--VSRLLNVQYRMNHKIMDWSSMEFY 506
Query: 631 EEELIACKDES--ISCTAYLNFLPNK---EFPVLFFGIQGCDEREGSNP---SWFNRIEV 682
++IA K S + T + N P+L GCD E + S FN EV
Sbjct: 507 NSKMIADKSVSNHLLVTGDSPKIRNTLTTTCPLLMIDTSGCDMEESQDDEGESKFNNGEV 566
Query: 683 SKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQ 742
V I+KL G + DIGVITPY QV L L Y +++G+V+ FQG+E+
Sbjct: 567 IVVKRHIEKLIECG-VKPNDIGVITPYNGQVKLLKSYLSKKYS-SMEIGTVDGFQGREKD 624
Query: 743 VIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQL 802
VII+S VRS D H +GFL+ RR NVA+TRA ++++ + +S ++
Sbjct: 625 VIIISMVRSNT-----DAPHKVGFLTEDRRTNVAITRARKHVVVVCDTDTISSHEPLKRM 679
Query: 803 LWYCSDNNSYQGCALPEREEFADED 827
+ Y N ++ +EF D
Sbjct: 680 VDYFKLNGLFRSALEYIEDEFLPSD 704
Score = 134 (52.2 bits), Expect = 4.9e-35, Sum P(3) = 4.9e-35
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 387 ISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAP 446
I+ LN+ Q +I + L I+GPPGTGKT T+VE I+QL + ++L C P
Sbjct: 231 INKGLNQSQKEAI--LFSLSSNDVACIHGPPGTGKTTTVVEFIVQLI--KSGKKVLACGP 286
Query: 447 SNSAADHLLEKIL 459
SN + D++LEK+L
Sbjct: 287 SNLSVDNMLEKLL 299
Score = 43 (20.2 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 137 PKGIGLHTTVLQFDVE-DRIERVVFLLAEDKIS--QSLASKRPYSRGGRKKQFSVDKYVV 193
P G G TTV++F V+ + + V +S L YS F ++ +
Sbjct: 258 PPGTGKTTTVVEFIVQLIKSGKKVLACGPSNLSVDNMLEKLLEYSNSSSCNGFLINATRI 317
Query: 194 GSRPARYRGQIYQNRL 209
G P R Q+ ++ L
Sbjct: 318 G-HPTRILPQLLKHTL 332
Score = 41 (19.5 bits), Expect = 4.9e-35, Sum P(3) = 4.9e-35
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 835 NHE---EEIPQSFQEDNWNQEPFQAEN 858
NHE +E Q ED N E Q EN
Sbjct: 842 NHENDNDEDEQDEDEDEENDEDEQKEN 868
>SGD|S000001500 [details] [associations]
symbol:HCS1 "Hexameric DNA polymerase alpha-associated DNA
helicase A" species:4932 "Saccharomyces cerevisiae" [GO:0003677
"DNA binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IC] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0033203 "DNA helicase A
complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 SGD:S000001500 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 EMBL:BK006944 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:X74152 GO:GO:0006273 GO:GO:0043141
HOGENOM:HOG000185831 OrthoDB:EOG444PTN GO:GO:0033203 EMBL:Z28017
PIR:S34700 RefSeq:NP_012908.1 ProteinModelPortal:P34243 SMR:P34243
DIP:DIP-1383N IntAct:P34243 MINT:MINT-399891 STRING:P34243
PaxDb:P34243 EnsemblFungi:YKL017C GeneID:853852 KEGG:sce:YKL017C
CYGD:YKL017c GeneTree:ENSGT00700000104572 OMA:QGGDFPE
SABIO-RK:P34243 NextBio:975085 Genevestigator:P34243
GermOnline:YKL017C TIGRFAMs:TIGR00376 Uniprot:P34243
Length = 683
Score = 299 (110.3 bits), Expect = 6.0e-35, Sum P(2) = 6.0e-35
Identities = 93/324 (28%), Positives = 168/324 (51%)
Query: 511 RIIISTYMSASL-----IYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVL 565
RI+++T +S +Y + + F + +DE QA EP+ +P+ ++ + +VL
Sbjct: 362 RIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQAMEPQCWIPLIAHQNQFHKLVL 421
Query: 566 AGDPMQLGPVIYSREAET--YGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILH 623
AGD QL P I + + + + + + +R+ + P + V L YR + +I+
Sbjct: 422 AGDNKQLPPTIKTEDDKNVIHNLETTLFDRIIKIFP----KRDMVKFLNVQYRMNQKIME 477
Query: 624 LPSKLFYEEELIACKDESISCTAYLNF-----LPNKE-----FPVLFFGIQGCDEREGSN 673
PS Y +L+A D +++ ++ P+++ P++++ QG + +E ++
Sbjct: 478 FPSHSMYNGKLLA--DATVANRLLIDLPTVDATPSEDDDDTKIPLIWYDTQGDEFQETAD 535
Query: 674 P-----SWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKAL-ESLYMPD 727
S +N E++ V E I+ L S N+ E IGVI+PY QV L K + + L + D
Sbjct: 536 EATILGSKYNEGEIAIVKEHIENLRSF-NVPENSIGVISPYNAQVSHLKKLIHDELKLTD 594
Query: 728 IKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIII 787
I++ +V+ FQG+E+ VII+S VRS K F+ +GFL RR NVA+TR L+++
Sbjct: 595 IEISTVDGFQGREKDVIILSLVRSNEK---FE----VGFLKEERRLNVAMTRPRRQLVVV 647
Query: 788 GNPHIVSKDPYWHQLLW--YCSDN 809
GN ++ + + W +C +N
Sbjct: 648 GNIEVLQRCGNKYLKSWSEWCEEN 671
Score = 163 (62.4 bits), Expect = 6.0e-35, Sum P(2) = 6.0e-35
Identities = 50/149 (33%), Positives = 76/149 (51%)
Query: 344 TYNRVN--MRRLYQATDAAQELDTEFLFPSESSGIRLIES--NTLVPISCNLNEEQMCSI 399
TYNR+ MR+L + + Q+ ++L +E I S N ++ NLN+ Q +I
Sbjct: 158 TYNRMESTMRKLSEISSPIQDKIIQYLV-NERPFIPNTNSFQNIKSFLNPNLNDSQKTAI 216
Query: 400 EKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKIL 459
+ +I+GPPGTGKT TL+E I QL + R+L+C PSN + D +LE++
Sbjct: 217 NFAINNDLT---IIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERL- 272
Query: 460 GEKAVEVRENEIFRLNAPSRPYEDVNADH 488
V N + R+ P+R D N H
Sbjct: 273 ---TPLVPNNLLLRIGHPARLL-DSNKRH 297
Score = 39 (18.8 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 164 EDKISQSLASKRPY 177
+DKI Q L ++RP+
Sbjct: 177 QDKIIQYLVNERPF 190
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 417 (151.9 bits), Expect = 8.8e-35, P = 8.8e-35
Identities = 152/554 (27%), Positives = 256/554 (46%)
Query: 330 QLNHRDENLYNV--QFTYNRVNMRRLYQATDAAQELDTEFLFPSESS-GIRLIESNTLVP 386
+LN + + +NV QF +++ R+ +QA D LD + P +S I +
Sbjct: 456 ELNLKPKTSHNVEIQFQIDQLLFRQWHQAVDRL--LDERLVLPDVASCSIPFCLQEPQIG 513
Query: 387 ISCNLNEEQMCSIEKILGL----KGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLL 442
N +Q +I I G + PP LIYGP GTGKT TL A L++ + + R+L
Sbjct: 514 -----NSKQKLAISFIAGQATSRRQVPPLLIYGPFGTGKTFTLAMATLEVIR-QPNTRVL 567
Query: 443 VCAPSNSAADHLLEKILGEKAVEVRENEI-FRLNAPSRPYEDVNADHIRFCFF--DEQIF 499
+C +NSAAD + + + + R+ A RP + +C D++ F
Sbjct: 568 ICTHTNSAADIYIREYFHKYVTNGHPWAVPLRIIATDRPINLTDPTTQMYCCLTKDQRSF 627
Query: 500 KCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKK 559
+ P + + III+T M + + V G+F+HI +DEA Q E E+++P+S Y
Sbjct: 628 RHPTREEIDKHPIIITTSMLSKHLK---VAPGYFTHIMIDEAAQMLECEALIPLS-YATF 683
Query: 560 DTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLV--RNYRS 617
+T +VLAGD MQ+ P ++ A+ + L RLF+ ++++ NYRS
Sbjct: 684 ETRIVLAGDHMQITPKLFC-VADGQSAYHTLLNRLFQFYQKEKHEVAMKSRIIFNENYRS 742
Query: 618 HPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKE-FPVLFFGIQGCDEREGSNPSW 676
I+ SK FY I K +I + N P+ E +P++F + G ER+ S SW
Sbjct: 743 TAGIIEFVSKHFY----IG-KGNAIHASG--NIPPHPEIYPLMFCHVPGVAERDMSMISW 795
Query: 677 FNRIEVSKVVEIIQKLTST-----GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVG 731
N E+++VVE ++++ G ++ I V++ + QV + + L +P++ V
Sbjct: 796 HNASEITQVVEKVEEIYQRWPHEWGAQDQKRICVVS-HGVQVSAIRQELRKKQLPEVVVE 854
Query: 732 SVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPH 791
+ E G+E +VII+STV T + H F + R N +TRA S +I++G+
Sbjct: 855 NYENLPGREFRVIIISTVH-TSESLRVSASHNHEFFNEARVLNTIMTRAQSQVIVVGDAV 913
Query: 792 IVSK----DPYWHQLLWYCSDNNSYQGCALPEREEFADEDPTAAECWNHEEEIPQSFQED 847
+ W + + C + S L + + C E + D
Sbjct: 914 ALCSHGQCSKVWKRFIQECIEKGSISPANLTMAQIKQAACDKESWCRRSPEGNDEDSDTD 973
Query: 848 NWNQEPFQAENLKP 861
+W+ E E++ P
Sbjct: 974 SWSSE---TESMNP 984
Score = 379 (138.5 bits), Expect = 2.7e-31, Sum P(4) = 2.7e-31
Identities = 102/319 (31%), Positives = 167/319 (52%)
Query: 507 LVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLA 566
L C+ +I+ T SAS A +++ + I +DE ++EPE+++P+ S+ K VVL
Sbjct: 2247 LACHDVILCTCSSAS---AGSLEKLNVKQILIDECAMSTEPETLIPLVSH-KHAEKVVLL 2302
Query: 567 GDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPS 626
GD QL PV+ + ++ GM S ER Y + L YR H I PS
Sbjct: 2303 GDHKQLKPVVNNDFCKSLGMETSLFER------Y----QKQAWMLDTQYRMHKNICEFPS 2352
Query: 627 KLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDE------REGSNPSWFNRI 680
+ FYE L C + + + L N+ P++F ++G ++ EG+ S N
Sbjct: 2353 QEFYEHRLKTCP-QLLRIPSVLYHKNNRCCPIIFGHVEGKEQSLVISTEEGNENSKANPE 2411
Query: 681 EVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQE 740
EV + V ++LT G + + I +++PY QV ++NK L + + V ++ + QG E
Sbjct: 2412 EVEQAVRTAKQLTLDGTIRPQSIAILSPYNAQVSEINKRLLKEGIRGVTVCTIMKSQGSE 2471
Query: 741 RQVIIVSTVRSTIKHN-------DFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIV 793
+ +I+STVRS +H + +KH LGF+++P + NVA+TRA L IIGN +++
Sbjct: 2472 WRYVILSTVRSCSRHEIDKKPTKSWQKKH-LGFVTDPNQVNVAITRAQEGLCIIGNRYLL 2530
Query: 794 SKDPYWHQLLWYCSDNNSY 812
+P W +LL + D+N Y
Sbjct: 2531 ECNPLWRRLLQHYIDHNCY 2549
Score = 66 (28.3 bits), Expect = 2.7e-31, Sum P(4) = 2.7e-31
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 352 RLYQATDAAQELDTEFLFPSESSGI---RLIESNTL-VPISCN-LNEEQMCSIEKILGLK 406
+L A+D A+ + PS++ + ++++ + +P S LN Q + +L
Sbjct: 2024 KLQNASDLAKSIALGHEPPSKALTVTKSKILQQKSFDLPGSQRKLNPSQN---KAVLNAL 2080
Query: 407 GAPPYLIYGPPGTGKTMTLVEAILQLYATREDA 439
P LI GPPGTGKT+ + + E+A
Sbjct: 2081 TKPFTLIQGPPGTGKTVVGTHIVYWFHKLNEEA 2113
Score = 49 (22.3 bits), Expect = 2.7e-31, Sum P(4) = 2.7e-31
Identities = 18/96 (18%), Positives = 42/96 (43%)
Query: 218 IRELIERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLS 277
IR+ + +KQ+P+ + + +N ++I+ + E +R N + L+
Sbjct: 839 IRQELRKKQLPEVVVENY--ENLPGREFRVIIISTVHTSESLRVSASHNHEFFNEARVLN 896
Query: 278 LVVPGLAERRPSLVNGDFIFAKHAYEDTSSAYQGFI 313
++ + +V GD + A ++ S ++ FI
Sbjct: 897 TIMTRAQSQ--VIVVGDAV-ALCSHGQCSKVWKRFI 929
Score = 45 (20.9 bits), Expect = 2.7e-31, Sum P(4) = 2.7e-31
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 441 LLVCAPSNSAADHLLEKILGEKAVE 465
+L C PSN + D + E ++ K+++
Sbjct: 2133 ILYCGPSNKSVDVVAEILMKMKSLK 2157
Score = 39 (18.8 bits), Expect = 2.8e-30, Sum P(4) = 2.8e-30
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 22 IDFEDYKSECSYNPSEEDPVQISFP 46
+D E K SY E++PV + P
Sbjct: 1303 VDVEAKKRGVSYYAPEQEPVHMLPP 1327
Score = 38 (18.4 bits), Expect = 3.6e-30, Sum P(4) = 3.6e-30
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 280 VPGLAERRPSLVN 292
VPG+AER S+++
Sbjct: 782 VPGVAERDMSMIS 794
>UNIPROTKB|E2R760 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA] [GO:0032575
"ATP-dependent 5'-3' RNA helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575
PANTHER:PTHR10887:SF23 EMBL:AAEX03011604 Ensembl:ENSCAFT00000038980
NextBio:20858044 Uniprot:E2R760
Length = 992
Score = 269 (99.8 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 103/315 (32%), Positives = 147/315 (46%)
Query: 532 HFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYL 591
HF + +DE QA E +P+ K +LAGD QL P S +A G+ S +
Sbjct: 367 HFDVVVIDECAQALEASCWIPLLKARK----CILAGDHKQLPPTTVSHKAALAGLSLSLM 422
Query: 592 ERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL 651
ERL E E HG V L YR H I+ S+ Y +L A S++ L L
Sbjct: 423 ERLAE-E---HG-ARVVRTLTVQYRMHQAIMRWASEALYHGQLTA--HPSVA-GHLLRDL 474
Query: 652 PN----KE--FPVLFFGIQGC---DEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEED 702
P +E P+L GC + + + S N EV V IQ L G + D
Sbjct: 475 PGVAATEETGIPLLLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAG-VQASD 533
Query: 703 IGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKH 762
I VITPY QV L ++L + P++++ SV+ FQG+E++ +++S VRS +RK
Sbjct: 534 IAVITPYNLQVDLLRQSLAHRH-PELEIKSVDGFQGREKEAVVLSFVRS-------NRKG 585
Query: 763 CLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPEREE 822
+GFL+ RR NVAVTRA + ++ + VS H L D+ + G R
Sbjct: 586 EVGFLAEDRRINVAVTRARRHVAVVCDSRTVSN----HAFLKTLVDHFTEHG---EVRTA 638
Query: 823 FADEDPTAAECWNHE 837
F D E ++HE
Sbjct: 639 FEYLDDIIPENYSHE 653
Score = 194 (73.4 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 80/240 (33%), Positives = 116/240 (48%)
Query: 267 VTLMRKGLYLSLVVPGLAERR-------PS--LVNGDFIFAKHAYEDTSSAYQGFIHRVE 317
V+ R GLY L+V L RR PS +GD + Y++ + G + R+
Sbjct: 52 VSSQRTGLYGRLLVT-LEPRRCTSAAVLPSNSFTSGDIV---GLYDEGNQLATGILTRIT 107
Query: 318 ADEVHLKF-AS-DFQLN-HRD-ENLYNVQFTYNRVNMRRLYQATDAAQELDT-------E 366
V + F AS DFQL+ RD E Y + N + +RL +A ++ + E
Sbjct: 108 QRSVTVAFDASHDFQLSLDRDRERAYRLLKLANDITYKRLKKALITLKKYHSGPASSLIE 167
Query: 367 FLFPSESSGIRLIESNTLVPISCN--LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMT 424
LF + SNT P+ CN L+ Q ++ L K +I+GPPGTGKT T
Sbjct: 168 VLFGGSAPSPA---SNTEPPLFCNTSLDASQKEAVSFALSQKELA--IIHGPPGTGKTTT 222
Query: 425 LVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDV 484
+VE ILQ A R+ ++L CAPSN A D+L+E++ K +I RL P+R E +
Sbjct: 223 VVEIILQ--AVRQGLKVLCCAPSNIAVDNLVERLARCK------QKILRLGHPARLLESI 274
>UNIPROTKB|E2R8W1 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
CTD:3508 OMA:HARQRIS PANTHER:PTHR10887:SF23 EMBL:AAEX03011604
RefSeq:XP_540807.2 Ensembl:ENSCAFT00000017093 GeneID:483686
KEGG:cfa:483686 Uniprot:E2R8W1
Length = 1010
Score = 269 (99.8 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 103/315 (32%), Positives = 147/315 (46%)
Query: 532 HFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYL 591
HF + +DE QA E +P+ K +LAGD QL P S +A G+ S +
Sbjct: 367 HFDVVVIDECAQALEASCWIPLLKARK----CILAGDHKQLPPTTVSHKAALAGLSLSLM 422
Query: 592 ERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL 651
ERL E E HG V L YR H I+ S+ Y +L A S++ L L
Sbjct: 423 ERLAE-E---HG-ARVVRTLTVQYRMHQAIMRWASEALYHGQLTA--HPSVA-GHLLRDL 474
Query: 652 PN----KE--FPVLFFGIQGC---DEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEED 702
P +E P+L GC + + + S N EV V IQ L G + D
Sbjct: 475 PGVAATEETGIPLLLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAG-VQASD 533
Query: 703 IGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKH 762
I VITPY QV L ++L + P++++ SV+ FQG+E++ +++S VRS +RK
Sbjct: 534 IAVITPYNLQVDLLRQSLAHRH-PELEIKSVDGFQGREKEAVVLSFVRS-------NRKG 585
Query: 763 CLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPEREE 822
+GFL+ RR NVAVTRA + ++ + VS H L D+ + G R
Sbjct: 586 EVGFLAEDRRINVAVTRARRHVAVVCDSRTVSN----HAFLKTLVDHFTEHG---EVRTA 638
Query: 823 FADEDPTAAECWNHE 837
F D E ++HE
Sbjct: 639 FEYLDDIIPENYSHE 653
Score = 194 (73.4 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 80/240 (33%), Positives = 116/240 (48%)
Query: 267 VTLMRKGLYLSLVVPGLAERR-------PS--LVNGDFIFAKHAYEDTSSAYQGFIHRVE 317
V+ R GLY L+V L RR PS +GD + Y++ + G + R+
Sbjct: 52 VSSQRTGLYGRLLVT-LEPRRCTSAAVLPSNSFTSGDIV---GLYDEGNQLATGILTRIT 107
Query: 318 ADEVHLKF-AS-DFQLN-HRD-ENLYNVQFTYNRVNMRRLYQATDAAQELDT-------E 366
V + F AS DFQL+ RD E Y + N + +RL +A ++ + E
Sbjct: 108 QRSVTVAFDASHDFQLSLDRDRERAYRLLKLANDITYKRLKKALITLKKYHSGPASSLIE 167
Query: 367 FLFPSESSGIRLIESNTLVPISCN--LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMT 424
LF + SNT P+ CN L+ Q ++ L K +I+GPPGTGKT T
Sbjct: 168 VLFGGSAPSPA---SNTEPPLFCNTSLDASQKEAVSFALSQKELA--IIHGPPGTGKTTT 222
Query: 425 LVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDV 484
+VE ILQ A R+ ++L CAPSN A D+L+E++ K +I RL P+R E +
Sbjct: 223 VVEIILQ--AVRQGLKVLCCAPSNIAVDNLVERLARCK------QKILRLGHPARLLESI 274
>UNIPROTKB|P38935 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0032797
"SMN complex" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0030424 "axon" evidence=ISS] [GO:0030426 "growth
cone" evidence=ISS] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006260 "DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006310 "DNA recombination" evidence=TAS] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006412
GO:GO:0006260 GO:GO:0008219 GO:GO:0030424 GO:GO:0008270
GO:GO:0006281 GO:GO:0051260 GO:GO:0006351 GO:GO:0043022
GO:GO:0000122 GO:GO:0030426 GO:GO:0006310 GO:GO:0003697
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Orphanet:98920 EMBL:AP000808 Gene3D:4.10.1110.10 GO:GO:0032575
EMBL:L14754 EMBL:L24544 EMBL:BC025299 EMBL:M64979 IPI:IPI00009379
PIR:A47500 RefSeq:NP_002171.2 UniGene:Hs.503048 PDB:1MSZ PDB:2LRR
PDB:4B3F PDB:4B3G PDBsum:1MSZ PDBsum:2LRR PDBsum:4B3F PDBsum:4B3G
ProteinModelPortal:P38935 SMR:P38935 IntAct:P38935 STRING:P38935
PhosphoSite:P38935 DMDM:229462778 PaxDb:P38935 PRIDE:P38935
Ensembl:ENST00000255078 GeneID:3508 KEGG:hsa:3508 UCSC:uc001ook.1
CTD:3508 GeneCards:GC11P068671 H-InvDB:HIX0009884
H-InvDB:HIX0171377 HGNC:HGNC:5542 MIM:600502 MIM:604320
neXtProt:NX_P38935 PharmGKB:PA29731 HOVERGEN:HBG077019
InParanoid:P38935 OMA:HARQRIS OrthoDB:EOG4GHZNJ PhylomeDB:P38935
EvolutionaryTrace:P38935 GenomeRNAi:3508 NextBio:13764
ArrayExpress:P38935 Bgee:P38935 CleanEx:HS_IGHMBP2
Genevestigator:P38935 GermOnline:ENSG00000132740
PANTHER:PTHR10887:SF23 Uniprot:P38935
Length = 993
Score = 260 (96.6 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 105/347 (30%), Positives = 157/347 (45%)
Query: 504 LAALVCYRIIISTYMSASLIYAEG----VDRGHFSHIFLDEAGQASEPESMVPISSYCKK 559
L +L ++++T AS A+G + +F + +DE QA E +P+ K
Sbjct: 339 LESLTSANVVLATNTGAS---ADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARK- 394
Query: 560 DTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHP 619
+LAGD QL P S +A G+ S +ERL E Y V L YR H
Sbjct: 395 ---CILAGDHKQLPPTTVSHKAALAGLSLSLMERL--AEEY---GARVVRTLTVQYRMHQ 446
Query: 620 QILHLPSKLFYEEELIACKDESISCTAYLNFLPN----KE--FPVLFFGIQGC---DERE 670
I+ S Y +L A S++ L LP +E P+L GC + E
Sbjct: 447 AIMRWASDTMYLGQLTA--HSSVA-RHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEE 503
Query: 671 GSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKV 730
S N EV V IQ L G + DI V++PY QV L ++L + P++++
Sbjct: 504 EDEQSKGNPGEVRLVSLHIQALVDAG-VPARDIAVVSPYNLQVDLLRQSLVHRH-PELEI 561
Query: 731 GSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNP 790
SV+ FQG+E++ +I+S VRS +RK +GFL+ RR NVAVTRA + +I +
Sbjct: 562 KSVDGFQGREKEAVILSFVRS-------NRKGEVGFLAEDRRINVAVTRARRHVAVICDS 614
Query: 791 HIVSKDPYWHQLLWYCSDNNSYQGCALPEREEFADEDPTAAECWNHE 837
V+ + L+ Y + + R F D E ++HE
Sbjct: 615 RTVNNHAFLKTLVEYFTQHGEV-------RTAFEYLDDIVPENYSHE 654
Score = 197 (74.4 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 76/235 (32%), Positives = 112/235 (47%)
Query: 267 VTLMRKGLYLSLVV---P---GLAERRPS--LVNGDFIFAKHAYEDTSSAYQGFIHRVEA 318
V+ R GLY L+V P G A PS +GD + A + S G + RV
Sbjct: 52 VSSQRTGLYGRLLVTFEPRRYGSAAALPSNSFTSGDIVGLYDAANEGSQLATGILTRVTQ 111
Query: 319 DEVHLKF--ASDFQLNHRDENLYNVQFTYNRVNMRRLYQATDAAQELDT-------EFLF 369
V + F + DFQL+ EN Y + N V RRL +A A ++ + E LF
Sbjct: 112 KSVTVAFDESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLF 171
Query: 370 PSESSGIRLIESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAI 429
S+ E + L + L+ Q ++ + L +I+GPPGTGKT T+VE I
Sbjct: 172 -GRSAPSPASEIHPLTFFNTCLDTSQKEAV--LFALSQKELAIIHGPPGTGKTTTVVEII 228
Query: 430 LQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDV 484
LQ A ++ ++L CAPSN A D+L+E++ + + I RL P+R E +
Sbjct: 229 LQ--AVKQGLKVLCCAPSNIAVDNLVERLA------LCKQRILRLGHPARLLESI 275
>ZFIN|ZDB-GENE-070912-617 [details] [associations]
symbol:si:dkey-97a13.6 "si:dkey-97a13.6"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 ZFIN:ZDB-GENE-070912-617
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391 EMBL:BX663525
IPI:IPI00499390 RefSeq:XP_699251.2 UniGene:Dr.89869
Ensembl:ENSDART00000017829 GeneID:570654 KEGG:dre:570654
NextBio:20890238 Uniprot:E7F3B1
Length = 2781
Score = 405 (147.6 bits), Expect = 1.9e-33, P = 1.9e-33
Identities = 151/529 (28%), Positives = 247/529 (46%)
Query: 289 SLVNGDFIFAKHAYEDTSSAYQGFIHRVEADEVHLKF------ASDFQLNHRDENLYNVQ 342
+LVN A + E + Y+ F+ + E HL S+ +L VQ
Sbjct: 429 ALVNCKSTKASMSAEHRNHVYEAFVMKETVGEGHLSLELSTQCVSELELRKETTCEMEVQ 488
Query: 343 FTYNRVNMRRLYQATDAAQELDTEFLFPSESSGIRLIESNTLVPISCN----LNEEQMCS 398
F NR++ +++QA D +L + P S N VP++ LN +Q +
Sbjct: 489 FQLNRLSFCQIHQAIDRLPDLHN--VLPDFS--------NCCVPVNLTKQSQLNNKQQIA 538
Query: 399 IEKILGL----KGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHL 454
+ ILG K A P LIYGP GTGKT+ L A +L A R ++L+C +NS+AD
Sbjct: 539 LNFILGKCEDDKVAAPLLIYGPFGTGKTLCLASAAKEL-AHRSQNKVLICTYTNSSADLY 597
Query: 455 LEKILGEKAVEVREN-EIFRLNAPSRPYEDVNADHI--RFCFF--DEQIFKCPPLAALVC 509
+ + + ++ R+ A + D I ++C D Q F P + L
Sbjct: 598 VREHFHPYIINGHPTLKLLRIKANKGGSAIIATDDITRKYCLCSRDGQSFILPARSDLES 657
Query: 510 YRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDP 569
+RIII+T A ++ + +G F+HI +DEA Q E E+++ + K T VVLAGD
Sbjct: 658 HRIIITTTSIARHLHELKLPKGFFTHILIDEASQMLEGEALMALG-LADKHTRVVLAGDH 716
Query: 570 MQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLV--RNYRSHPQILHLPSK 627
MQ+ P ++S + + L RLF N ++++ NYRS +I+ S
Sbjct: 717 MQMAPKLFS-VTDDKRSEHTLLNRLFHYYQDQSINIAKKSRIIFNENYRSTTEIVDFVST 775
Query: 628 LFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQG-CDEREG-SNPSWFNRIEVSKV 685
FY + I + + ++ P + P++F ++G C ++ SW N EV+ V
Sbjct: 776 YFYVSDGIKARGD-------VHPHPRLK-PLIFHHVRGECHLSSTITSTSWLNYAEVNSV 827
Query: 686 VEIIQKLTST-----GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQE 740
V ++Q L + G+ + I V++ QQV + L + V ++ QG++
Sbjct: 828 VNMVQVLLTDWPMEWGDKDPKQICVLSE-GQQVAAIRIHLRRKGFYGVSVQNLANIQGKQ 886
Query: 741 RQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGN 789
+VII++TV + K D C F + R N A+TRA SL+++IG+
Sbjct: 887 FRVIIITTVHTRDKLLQLDSS-CPEFFDDIRALNTALTRAQSLVVVIGD 934
Score = 289 (106.8 bits), Expect = 2.8e-23, Sum P(3) = 2.8e-23
Identities = 87/295 (29%), Positives = 138/295 (46%)
Query: 536 IFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLF 595
I +DE A+EP+++VP+ S+ K VVL GD QL P++ + GM +S ER
Sbjct: 2493 ILIDECAMATEPQTLVPLVSF--KPEKVVLLGDHKQLRPIVKNNHVRRLGMTRSLFERYM 2550
Query: 596 ECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKE 655
+ L YR H +I PS+ +Y + L E S +
Sbjct: 2551 D----------RAIMLDTQYRMHEEICKFPSEAYYNDMLKTVVRERTSVLNAETEGRRQS 2600
Query: 656 FPVLFFGIQG------CDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPY 709
+LF I+G G+ S N EV K VEI +L + G + EDI +++PY
Sbjct: 2601 KRILFGDIRGEEIGLVVSTARGNENSKANFDEVKKAVEICIQLVTVGRVRPEDIAILSPY 2660
Query: 710 RQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRST-------IKHNDFDRKH 762
QV ++ + L + V ++ + QG E Q +I+S VRS + ++ KH
Sbjct: 2661 NAQVAQIRERLSDFELKGFTVTTITKSQGSEWQYVILSIVRSCPSDEIEPMPSREWLSKH 2720
Query: 763 CLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCAL 817
+GF+ + + NV +TRA L I+GN +++ P W +LL + S + GC +
Sbjct: 2721 -IGFVGDENQINVGITRAQVGLCILGNQAVLNCSPAWQKLLKHYSGH----GCVV 2770
Score = 92 (37.4 bits), Expect = 2.8e-23, Sum P(3) = 2.8e-23
Identities = 34/88 (38%), Positives = 45/88 (51%)
Query: 391 LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMT---LVEAILQLYA---------TRED 438
LNE Q ++EK L K +I GPPGTGKT+ +V QL + T +D
Sbjct: 2290 LNESQFKALEKALNGKFT---IIQGPPGTGKTVVGAYIVYWFSQLNSRNLWRLKDPTDKD 2346
Query: 439 AR--LLVCAPSNSAADHLLEKIL--GEK 462
R +L C PSN + D + E +L GEK
Sbjct: 2347 KREVILYCGPSNKSVDVVAEYLLKFGEK 2374
Score = 41 (19.5 bits), Expect = 4.9e-18, Sum P(3) = 4.9e-18
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 421 KTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEK----ILGEKAVEVRENEI 471
++++ EA++ Y+ D+ +P D +L++ +LG + VE + +I
Sbjct: 1801 RSLSCREALVGHYSLHLDSYTHASSPIRRYIDVVLQRLMHAVLGNRPVEYSQTDI 1855
Score = 39 (18.8 bits), Expect = 2.8e-23, Sum P(3) = 2.8e-23
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 223 ERKQIPDAITDGLT--LKNYTSFFKTLLIMEE 252
++ Q P+ + GL LK Y F++L ++E+
Sbjct: 1705 QQTQFPNT-SPGLVNRLKKYNEKFESLQVLEK 1735
>UNIPROTKB|F1RY71 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0051260 GO:GO:0043022 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:CU694814 RefSeq:XP_003122472.2
Ensembl:ENSSSCT00000014076 GeneID:100520173 KEGG:ssc:100520173
Uniprot:F1RY71
Length = 987
Score = 279 (103.3 bits), Expect = 5.7e-33, Sum P(2) = 5.7e-33
Identities = 107/347 (30%), Positives = 159/347 (45%)
Query: 504 LAALVCYRIIISTYMSASLIYAEG----VDRGHFSHIFLDEAGQASEPESMVPISSYCKK 559
L +L R++++T AS ++G + GHF + +DE QA E VP+ K
Sbjct: 336 LESLTAARVVLATNAGAS---SDGPLKLLPDGHFDVVVIDECAQALEASCWVPLLKARK- 391
Query: 560 DTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHP 619
+LAGD QL P I S +A G+ S +ERL E + L YR H
Sbjct: 392 ---CILAGDHKQLPPTIISHKAALAGLALSLMERLVE-----ERGAGVLRMLTVQYRMHQ 443
Query: 620 QILHLPSKLFYEEELIACKDESISCTAYLNFLPN----KE--FPVLFFGIQGC---DERE 670
I S+ Y L A S++ L LP +E P+L GC + E
Sbjct: 444 AIAQWASEALYHGRLTA--HASVA-GHLLRDLPGVAATEETGIPLLLVDTAGCGLFELEE 500
Query: 671 GSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKV 730
S N EV V +Q L G + D+ VITPY QV L ++L + P++++
Sbjct: 501 EDEQSKGNPGEVRLVRLHVQALVDAG-VPAGDVAVITPYNLQVDLLRQSLAQRH-PELEI 558
Query: 731 GSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNP 790
SV+ FQG+E++ +I+S VRS +RK +GFL+ RR NVAVTRA + ++ +
Sbjct: 559 KSVDGFQGREKEAVILSFVRS-------NRKGEVGFLAEDRRINVAVTRARRHVAVVCDS 611
Query: 791 HIVSKDPYWHQLLWYCSDNNSYQGCALPEREEFADEDPTAAECWNHE 837
VS + L+ Y +++ R F D E ++HE
Sbjct: 612 RTVSNHAFLKTLVAYFAEHGEV-------RTAFEYLDDLVPENYSHE 651
Score = 171 (65.3 bits), Expect = 5.7e-33, Sum P(2) = 5.7e-33
Identities = 82/260 (31%), Positives = 118/260 (45%)
Query: 251 EEIQLKE-DMRAYDMEN--VTLMRKGLYLSLVVPGLAERR-------PS--LVNGDFIFA 298
E + LKE R + V+ R GLY L+V RR PS +GD +
Sbjct: 33 ENVSLKELQSRGVCLLKLQVSSQRTGLYGRLLVT-FEPRRCASAAVLPSNSFTSGDIV-- 89
Query: 299 KHAYEDTSSAYQGFIHRVEAD--EVHLKFASDFQLNHRDENLYNVQFTYNRVNMRRLYQA 356
Y++ S G + R+ V L + DFQL+ E Y + N V +RL +A
Sbjct: 90 -GLYDEDSQLATGVLTRITQKLVTVALDASHDFQLSLDRERSYRLLKLANDVTYKRLKKA 148
Query: 357 TDAAQELDT-------EFLF----PSESSGIR-LIESNTLVPISCNLNEEQMCSIEKILG 404
Q+ + E LF PS +S I L NT + S +E + +
Sbjct: 149 LTTLQKYHSGPASALIEVLFGASAPSPASDIPPLTFYNTALDAS---QKEAV-----LFA 200
Query: 405 LKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAV 464
L +I+GPPGTGKT T+VE ILQ A ++ +++L CAPSN A D+L+E++ K
Sbjct: 201 LSQKELAIIHGPPGTGKTTTVVEIILQ--AVKQGSKVLCCAPSNVAVDNLVERLARWK-- 256
Query: 465 EVRENEIFRLNAPSRPYEDV 484
I RL P+R E +
Sbjct: 257 ----QRIVRLGHPARLLESI 272
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 399 (145.5 bits), Expect = 8.1e-33, P = 8.1e-33
Identities = 143/504 (28%), Positives = 235/504 (46%)
Query: 341 VQFTYNRVNMRRLYQATDAAQELDTEFLFPSESSGIRLIESNTLVPISCNLNEEQMCSIE 400
VQF + + R +QA D E E L + L ++ P+ N +Q ++
Sbjct: 469 VQFQIDPMTFRLWHQAVDTLPE---EQLVVPDLPTCALPRPWSVPPLRRG-NRKQELAVA 524
Query: 401 KILGL-----KGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAAD-HL 454
I G + PP LIYGP GTGKT TL A L++ R + ++L+C +NSAAD ++
Sbjct: 525 LIAGWGPGDGRRVPPLLIYGPFGTGKTYTLAMASLEVIR-RPETKVLICTHTNSAADIYI 583
Query: 455 LEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFF--DEQIFKCPPLAALVCYRI 512
E + E R+ RP + +++C D Q F+ P A L +R+
Sbjct: 584 REYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRV 643
Query: 513 IISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQL 572
+++T A + V G FSHI +DEA Q E E++ P++ Y T +VLAGD MQ+
Sbjct: 644 VVTTTSQARELR---VPVGFFSHILIDEAAQMLECEALTPLA-YASHGTRLVLAGDHMQV 699
Query: 573 GPVIYSREAETYGMGKSYLERLFEC-EPYCHGNENYVTKLV--RNYRSHPQILHLPSKLF 629
P ++S A + L RLF C + H ++LV NYR I+ S+ F
Sbjct: 700 TPRLFS-VARARAAEHTLLHRLFLCYQQETHEVARQ-SRLVFHENYRCTDAIVSFISRHF 757
Query: 630 YEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEII 689
Y K I + P + +P++F + G +R+ S SW N E+++VVE +
Sbjct: 758 Y-----VAKGNPIHARGKVPPHP-RHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVEKV 811
Query: 690 QKLTST-----GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVI 744
Q+ +T G + I V++ + QV L + L + + VGS E G++ +V+
Sbjct: 812 QEAYNTWPSCWGGREQRCICVVS-HGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVV 870
Query: 745 IVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSK----DPYWH 800
++STV T + F ++ R N +TRA S L+++G+ + W
Sbjct: 871 VLSTVH-TCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWE 929
Query: 801 QLLWYCSDNNSY--QGCALPEREE 822
+ C + +S +G ++ + E+
Sbjct: 930 SFIRECVERHSVCPEGLSMEQVEQ 953
Score = 331 (121.6 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 95/284 (33%), Positives = 147/284 (51%)
Query: 536 IFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLF 595
I +DEAG A+EPE+++P+ + + + VV+L GD QL PV+ + + G+ +S ER
Sbjct: 2357 ILVDEAGMATEPETLIPLVQFPQAEKVVLL-GDHKQLRPVVKNERLQNLGLDRSLFERYH 2415
Query: 596 ECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKE 655
E H L YR H I PS FY+ +L + + L +
Sbjct: 2416 ED---AH-------MLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRP-PSVLGHAGKES 2464
Query: 656 FPVLFFGIQGCDER------EGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPY 709
PV+F +QG + EG+ S N EV++VV I ++LT + +DI V+TPY
Sbjct: 2465 CPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVEPQDIAVLTPY 2524
Query: 710 RQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDR-------KH 762
Q +++KAL + + V S+ + QG E + ++VSTVR+ K +D D+ K
Sbjct: 2525 NAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAK-SDLDQRPTKSWLKK 2583
Query: 763 CLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYC 806
LGF+ +P + NVAVTRA L +IG+ ++ P W LL +C
Sbjct: 2584 FLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFC 2627
Score = 63 (27.2 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 31/123 (25%), Positives = 54/123 (43%)
Query: 377 RLIESNTL-VPISCN-LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYA 434
R +E T +P + LN Q ++ + L P +I GPPGTGKT+ + + +
Sbjct: 2137 RFLERQTYNIPGGRHKLNPSQNVAVREALE---KPFTVIQGPPGTGKTIVGLHIVFWFHK 2193
Query: 435 T-----------REDARL-----LVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPS 478
+ R + RL L C PSN + D L +L + +E++ ++ A +
Sbjct: 2194 SNQEQVQPGGPPRGEKRLGGPCILYCGPSNKSVDVLAGLLL--RRMELKPLRVYSEQAEA 2251
Query: 479 RPY 481
+
Sbjct: 2252 SEF 2254
Score = 42 (19.8 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 227 IPDAITDGLTLKNYTSFFKTLLIMEEIQ 254
+P + D TL T+ +K LL + E+Q
Sbjct: 1811 LPGTVPDPHTLAVETALWKQLLELVELQ 1838
>TAIR|locus:2130384 [details] [associations]
symbol:MAA3 "MAGATAMA 3" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009875 "pollen-pistil interaction" evidence=IMP]
[GO:0010183 "pollen tube guidance" evidence=IMP] PROSITE:PS51198
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0004386 GO:GO:0009553 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:Z97339 GO:GO:0010183 EMBL:AL161542 EMBL:EU915246
IPI:IPI00522212 PIR:E71420 RefSeq:NP_193292.3 UniGene:At.33168
ProteinModelPortal:B6SFA4 SMR:B6SFA4 PaxDb:B6SFA4 PRIDE:B6SFA4
EnsemblPlants:AT4G15570.1 GeneID:827233 KEGG:ath:AT4G15570
GeneFarm:2417 TAIR:At4g15570 HOGENOM:HOG000030627 KO:K10706
OMA:TIMREFT PhylomeDB:B6SFA4 ProtClustDB:CLSN2680970
Genevestigator:B6SFA4 GO:GO:0009875 InterPro:IPR026852
PANTHER:PTHR10887:SF27 Uniprot:B6SFA4
Length = 818
Score = 363 (132.8 bits), Expect = 8.7e-33, Sum P(2) = 8.7e-33
Identities = 134/460 (29%), Positives = 216/460 (46%)
Query: 440 RLLVCAPSNSAADHLLEKILG----EKAVEVRENEIFRLNAPSR-PYEDVNADHI----R 490
R+LVCAPSNSA D ++ ++L ++ + +I R+ + V+ DH+ R
Sbjct: 376 RVLVCAPSNSALDEIVLRLLSSGLRDENAQTYTPKIVRIGLKAHHSVASVSLDHLVAQKR 435
Query: 491 FCFFDEQI-------FKCPPLAALVCYRIIISTY-MSASLIYAEGVDRGHFSHIFLDEAG 542
D+ A L I+ +T S S + A+ +RG F + +DEA
Sbjct: 436 GSAIDKPKQGTTGTDIDSIRTAILEEAAIVFATLSFSGSALLAKS-NRG-FDVVIIDEAA 493
Query: 543 QASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCH 602
QA EP +++P+++ CK+ V L GDP QL + S A+ G G S ERL +
Sbjct: 494 QAVEPATLIPLATRCKQ---VFLVGDPKQLPATVISTVAQDSGYGTSMFERLQKA----- 545
Query: 603 GNENYVTKLVRN-YRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEF-PVLF 660
Y K+++ YR HP+I PSK FYE L D T ++ + F P F
Sbjct: 546 ---GYPVKMLKTQYRMHPEIRSFPSKQFYEGALEDGSDIEAQTTR--DWHKYRCFGPFCF 600
Query: 661 FGI-QGCDERE-GSNPSWFNRIEVSKVVEIIQKL-TSTGNL-SEEDIGVITPYRQQVLKL 716
F I +G + + G+ S N EV V+ I +L T L S + +I+PY QV
Sbjct: 601 FDIHEGKESQHPGATGSRVNLDEVEFVLLIYHRLVTMYPELKSSSQLAIISPYNYQVKTF 660
Query: 717 NKALESLYMPD----IKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRR 772
+ ++ + + + +V+ FQG+E+ V I S VR+ N+ + +GFLSN RR
Sbjct: 661 KDRFKEMFGTEAEKVVDINTVDGFQGREKDVAIFSCVRA----NENGQ---IGFLSNSRR 713
Query: 773 FNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPEREEFADEDPTAAE 832
NV +TRA S ++++G+ + DP W L+ N + P F++E+ +
Sbjct: 714 MNVGITRAKSSVLVVGSAATLKSDPLWKNLIESAEQRNRLFKVSKPLNNFFSEENLETMK 773
Query: 833 CWNHEEEIPQS-FQEDNWNQEPFQAENLKPVKDEDEWSDG 871
+ EIP + ED ++ + P +D++ DG
Sbjct: 774 L-TEDMEIPDAPLYED-------ESLPVAPYGGDDDFGDG 805
Score = 78 (32.5 bits), Expect = 8.7e-33, Sum P(2) = 8.7e-33
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 390 NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAI 429
NLN+ Q +I+ +GL LI GPPGTGKT T++ +
Sbjct: 257 NLNKSQKEAID--VGLSRKSFVLIQGPPGTGKTQTILSIL 294
>RGD|68325 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2" species:10116
"Rattus norvegicus" [GO:0000049 "tRNA binding" evidence=IEA;ISO;ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA;ISO;IDA] [GO:0003723 "RNA binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO;ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation" evidence=ISO]
[GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0032797 "SMN complex"
evidence=IEA;ISO] [GO:0043022 "ribosome binding"
evidence=IEA;ISO;ISS] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=IEA;ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 RGD:68325 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0030424 GO:GO:0001078 GO:GO:0008270 GO:GO:0051260
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OrthoDB:EOG4GHZNJ
PANTHER:PTHR10887:SF23 EMBL:AF199411 IPI:IPI00190206
RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 270 (100.1 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 91/284 (32%), Positives = 137/284 (48%)
Query: 532 HFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYL 591
+F + +DE QA E +P+ K +LAGD QL P S +A G+ +S +
Sbjct: 367 YFDVVVVDECAQALEASCWIPLLKAPK----CILAGDHKQLPPTTVSHKAALAGLSRSLM 422
Query: 592 ERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL 651
ERL E HG V L YR H I S+ Y +L A + L +
Sbjct: 423 ERLAEK----HGAA-VVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGV 477
Query: 652 PNKE---FPVLFFGIQGC---DEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGV 705
+ E P+L GC + E + S N EV V IQ L G + DI V
Sbjct: 478 ADTEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAG-VQAGDIAV 536
Query: 706 ITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLG 765
I PY QV L ++L + + P++++ SV+ FQG+E++ +I++ VRS +RK +G
Sbjct: 537 IAPYNLQVDLLRQSLSNKH-PELEIKSVDGFQGREKEAVILTFVRS-------NRKGEVG 588
Query: 766 FLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDN 809
FL+ RR NVAVTRA + +I + H V+ + L+ Y +++
Sbjct: 589 FLAEDRRINVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEH 632
Score = 178 (67.7 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 61/204 (29%), Positives = 98/204 (48%)
Query: 289 SLVNGDFIFAKHAYEDTSSAYQGFIHRVEADEVHLKF--ASDFQLNHRDENLYNVQFTYN 346
S +GD + + ++S G + R+ V + F + DFQLN EN Y + N
Sbjct: 82 SFTSGDIV-GLYDTNESSQLATGVLTRITQKSVIVAFDESHDFQLNLDRENTYRLLKLAN 140
Query: 347 RVNMRRLYQATDAAQELDT---EFLFPSESSGIRLIESNTLVPIS---CNLNEEQMCSIE 400
V +RL +A ++ + L G + + P++ L+ Q ++
Sbjct: 141 DVTYKRLKKALLTLKKYHSGPASSLIDVLLGGSTPSPATEIPPLTFYNTTLDPSQKEAVS 200
Query: 401 KILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILG 460
L K +I+GPPGTGKT T+VE ILQ A ++ ++L CAPSN A D+L+E++
Sbjct: 201 FALAQKEVA--IIHGPPGTGKTTTVVEIILQ--AVKQGLKVLCCAPSNIAVDNLVERLA- 255
Query: 461 EKAVEVRENEIFRLNAPSRPYEDV 484
+ + +I RL P+R E V
Sbjct: 256 -----LCKKQILRLGHPARLLESV 274
>UNIPROTKB|Q9EQN5 [details] [associations]
symbol:Ighmbp2 "DNA-binding protein SMUBP-2" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 RGD:68325 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0030424 GO:GO:0001078
GO:GO:0008270 GO:GO:0051260 GO:GO:0043621 GO:GO:0043022
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 GO:GO:0032797 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:AF199411
IPI:IPI00190206 RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 270 (100.1 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 91/284 (32%), Positives = 137/284 (48%)
Query: 532 HFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYL 591
+F + +DE QA E +P+ K +LAGD QL P S +A G+ +S +
Sbjct: 367 YFDVVVVDECAQALEASCWIPLLKAPK----CILAGDHKQLPPTTVSHKAALAGLSRSLM 422
Query: 592 ERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL 651
ERL E HG V L YR H I S+ Y +L A + L +
Sbjct: 423 ERLAEK----HGAA-VVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGV 477
Query: 652 PNKE---FPVLFFGIQGC---DEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGV 705
+ E P+L GC + E + S N EV V IQ L G + DI V
Sbjct: 478 ADTEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAG-VQAGDIAV 536
Query: 706 ITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLG 765
I PY QV L ++L + + P++++ SV+ FQG+E++ +I++ VRS +RK +G
Sbjct: 537 IAPYNLQVDLLRQSLSNKH-PELEIKSVDGFQGREKEAVILTFVRS-------NRKGEVG 588
Query: 766 FLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDN 809
FL+ RR NVAVTRA + +I + H V+ + L+ Y +++
Sbjct: 589 FLAEDRRINVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEH 632
Score = 178 (67.7 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 61/204 (29%), Positives = 98/204 (48%)
Query: 289 SLVNGDFIFAKHAYEDTSSAYQGFIHRVEADEVHLKF--ASDFQLNHRDENLYNVQFTYN 346
S +GD + + ++S G + R+ V + F + DFQLN EN Y + N
Sbjct: 82 SFTSGDIV-GLYDTNESSQLATGVLTRITQKSVIVAFDESHDFQLNLDRENTYRLLKLAN 140
Query: 347 RVNMRRLYQATDAAQELDT---EFLFPSESSGIRLIESNTLVPIS---CNLNEEQMCSIE 400
V +RL +A ++ + L G + + P++ L+ Q ++
Sbjct: 141 DVTYKRLKKALLTLKKYHSGPASSLIDVLLGGSTPSPATEIPPLTFYNTTLDPSQKEAVS 200
Query: 401 KILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILG 460
L K +I+GPPGTGKT T+VE ILQ A ++ ++L CAPSN A D+L+E++
Sbjct: 201 FALAQKEVA--IIHGPPGTGKTTTVVEIILQ--AVKQGLKVLCCAPSNIAVDNLVERLA- 255
Query: 461 EKAVEVRENEIFRLNAPSRPYEDV 484
+ + +I RL P+R E V
Sbjct: 256 -----LCKKQILRLGHPARLLESV 274
>UNIPROTKB|F1MHU8 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0051260 GO:GO:0043022
GO:GO:0000049 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:DAAA02063651 IPI:IPI01017505
RefSeq:XP_003584325.1 RefSeq:XP_003588118.1 UniGene:Bt.103594
Ensembl:ENSBTAT00000044489 GeneID:618606 KEGG:bta:618606
Uniprot:F1MHU8
Length = 981
Score = 277 (102.6 bits), Expect = 3.1e-32, Sum P(2) = 3.1e-32
Identities = 108/347 (31%), Positives = 160/347 (46%)
Query: 504 LAALVCYRIIISTYMSASLIYAEG----VDRGHFSHIFLDEAGQASEPESMVPISSYCKK 559
L +L ++++T AS A+G + HF + +DE QA E +P+ K
Sbjct: 336 LESLAAASVVLATNTGAS---ADGPLKLLPDSHFDMVVIDECAQALEASCWIPLLKARK- 391
Query: 560 DTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHP 619
+LAGD QL P I S +A G+ S +ERL E HG + L YR H
Sbjct: 392 ---CILAGDHKQLPPTIVSHKAALAGLSLSLMERLAER----HG-AGALRMLTVQYRMHQ 443
Query: 620 QILHLPSKLFYEEELIACKDESISCTAYLNFLPN----KE--FPVLFFGIQGC---DERE 670
I S+ Y +L A S++ L LP +E P+L GC + E
Sbjct: 444 AIARWASEALYHGQLTA--HPSVA-GHLLRDLPGVAATEETGVPLLLVDTAGCGLLELEE 500
Query: 671 GSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKV 730
S N EV V +Q L G + DI VITPY QV L ++L +P++++
Sbjct: 501 DDEQSKGNPGEVRLVGLHVQALVDAG-VRAADIAVITPYNLQVDLLRQSLAHR-LPELEI 558
Query: 731 GSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNP 790
SV+ FQG+E++ +I+S VRS +RK +GFL+ RR NVAVTRA + ++ +
Sbjct: 559 RSVDGFQGREKEAVILSFVRS-------NRKGEVGFLAEDRRINVAVTRARRHVAVVCDS 611
Query: 791 HIVSKDPYWHQLLWYCSDNNSYQGCALPEREEFADEDPTAAECWNHE 837
VS + L+ Y +++ R F D E ++HE
Sbjct: 612 RTVSNHAFLKTLVDYLTEHGEV-------RTAFEYLDDIVPENYSHE 651
Score = 166 (63.5 bits), Expect = 3.1e-32, Sum P(2) = 3.1e-32
Identities = 74/258 (28%), Positives = 119/258 (46%)
Query: 251 EEIQLKE-DMRAYDMEN--VTLMRKGLYLSLVVPGLAERR-------PS--LVNGDFIFA 298
E + LKE R + V+ R GLY L++ L RR PS +GD +
Sbjct: 33 ENVSLKELQSRGVCLLKLQVSSQRTGLYGRLLIT-LEPRRCVSAAVLPSNSFTSGDIV-- 89
Query: 299 KHAYEDTSSAYQGFIHRVEADEVHLKF--ASDFQLNHRDENLYNVQFTYNRVNMRRLYQA 356
Y+++ G + R+ V + F + D QL+ E+ Y + N V +RL +A
Sbjct: 90 -GLYDESGQLATGILTRITQKAVTVAFDESHDSQLSLDQEHSYRLLKLANDVTYKRLKKA 148
Query: 357 TDAAQELDT-------EFLFPSESSGIRLIESNTLVPIS-CN--LNEEQMCSIEKILGLK 406
+ ++ E LF + + + P++ CN L+ Q ++ + L
Sbjct: 149 LISLKKHHAGPASSLIEVLFGASDPS----PPSEMPPLTFCNPALDASQQEAV--LFALS 202
Query: 407 GAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEV 466
+I+GPPGTGKT T+VE ILQ A + +++L CAPSN A D+L+E++ K
Sbjct: 203 QKELAIIHGPPGTGKTTTVVEIILQ--AVKRGSKVLCCAPSNVAVDNLVERLAQWK---- 256
Query: 467 RENEIFRLNAPSRPYEDV 484
I RL P+R + +
Sbjct: 257 --QRILRLGHPARLLDSI 272
>UNIPROTKB|Q60560 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:10036
"Mesocricetus auratus" [GO:0000049 "tRNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=ISS] [GO:0043022 "ribosome binding"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0030424 GO:GO:0008270 GO:GO:0006351
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
PANTHER:PTHR10887:SF23 EMBL:L15625 PIR:T48845
ProteinModelPortal:Q60560 SMR:Q60560 Uniprot:Q60560
Length = 989
Score = 268 (99.4 bits), Expect = 3.5e-32, Sum P(2) = 3.5e-32
Identities = 96/314 (30%), Positives = 149/314 (47%)
Query: 506 ALVCYRIIISTYMSASLIYAEG----VDRGHFSHIFLDEAGQASEPESMVPISSYCKKDT 561
+L ++++T AS ++G + HF + +DE QA E +P+ K
Sbjct: 340 SLTAADVVLATNTGAS---SDGPLKLLPENHFDVVVVDECAQALEASCWIPLLKAPK--- 393
Query: 562 VVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQI 621
+LAGD QL P S +A G+ +S +ERL E HG V L YR H I
Sbjct: 394 -CILAGDHRQLPPTTISHKAALAGLSRSLMERLVEK----HG-AGAVRMLTVQYRMHQAI 447
Query: 622 LHLPSKLFYEEELIACKDESISCTAYLNFLPNKE---FPVLFFGIQGC---DEREGSNPS 675
S+ Y +L A + L + + E P+L GC + E + S
Sbjct: 448 TRWASEAMYHGQLTAHPSVAGHLLKDLPGVADTEETSVPLLLIDTAGCGLLELDEEDSQS 507
Query: 676 WFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQ 735
N EV V IQ L G + DI VI PY QV L ++L + + P++++ SV+
Sbjct: 508 KGNPGEVRLVTLHIQALVDAG-VHAGDIAVIAPYNLQVDLLRQSLSNKH-PELEIKSVDG 565
Query: 736 FQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSK 795
FQG+E++ +I++ VRS +RK +GFL+ RR NVAVTRA + +I + V+
Sbjct: 566 FQGREKEAVILTFVRS-------NRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNN 618
Query: 796 DPYWHQLLWYCSDN 809
+ L+ Y +++
Sbjct: 619 HAFLKTLVDYFTEH 632
Score = 175 (66.7 bits), Expect = 3.5e-32, Sum P(2) = 3.5e-32
Identities = 65/204 (31%), Positives = 96/204 (47%)
Query: 289 SLVNGDFIFAKHAYEDTSSAYQGFIHRVEADEVHLKF--ASDFQLNHRDENLYNVQFTYN 346
S +GD + A E + A G + R+ V + F + DFQLN EN Y + N
Sbjct: 82 SFTSGDIVGLYDANESSQLA-TGVLTRITQKSVTVAFDESHDFQLNLDRENTYRLLKLAN 140
Query: 347 RVNMRRLYQA--------TDAAQELDTEFLFPSESSGIRLIESNTLVPISCNLNEEQMCS 398
V +RL +A + A L L S S I T + + ++++ S
Sbjct: 141 DVTYKRLKKALMTLKKYHSGPASSLIDVLLGGSSPSPTTEIPPFTFYNTALDPSQKEAVS 200
Query: 399 IEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKI 458
L K +I+GPPGTGKT T+VE ILQ A ++ ++L CAPSN A D+L+E++
Sbjct: 201 FA--LAQKEVA--IIHGPPGTGKTTTVVEIILQ--AVKQGLKILCCAPSNVAVDNLVERL 254
Query: 459 LGEKAVEVRENEIFRLNAPSRPYE 482
+ + I RL P+R E
Sbjct: 255 A------LCKKRILRLGHPARLLE 272
>UNIPROTKB|E1BY42 [details] [associations]
symbol:E1BY42 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51061 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:AADN02040052 EMBL:AADN02040053
IPI:IPI00595444 Ensembl:ENSGALT00000006901 Uniprot:E1BY42
Length = 976
Score = 262 (97.3 bits), Expect = 3.5e-32, Sum P(2) = 3.5e-32
Identities = 102/317 (32%), Positives = 147/317 (46%)
Query: 505 AALVCYRIIISTYMSASLIYAEG----VDRGHFSHIFLDEAGQASEPESMVPISSYCKKD 560
AAL ++++T AS ++G + +F + +DE QA E +P+ K
Sbjct: 336 AALTHASVVLATNTGAS---SDGPLKLLPENYFDLVVIDECAQALEASCWIPLLKAPK-- 390
Query: 561 TVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQ 620
+LAGD QL P I S +A G+ S +ER+ E +G E V L YR H
Sbjct: 391 --CILAGDHKQLPPTIISHKAAAKGLSLSLMERVIER----YG-EKVVKMLTVQYRMHEA 443
Query: 621 ILHLPSKLFYEEELIACKDESISCTAYLNFLPN----KE--FPVLFFGIQGC-------- 666
I+ S Y L A S++ L LP +E P+L GC
Sbjct: 444 IMQWASSEMYGGRLTA--HPSVA-QHLLKDLPGVTCTEETTIPLLLIDTAGCGLLELEVE 500
Query: 667 DEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMP 726
DE+ NP EV V IQ L G + D+ V+ PY QV L + L Y P
Sbjct: 501 DEQSKGNPG-----EVQLVGLHIQALVDAG-VKARDVAVVAPYNLQVDMLREHLCHRY-P 553
Query: 727 DIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLII 786
++++ SV+ FQG+E++ +I+S VRS +RK +GFL+ RR NVAVTRA + I
Sbjct: 554 ELEIKSVDGFQGREKEAVILSFVRS-------NRKGEVGFLAEDRRINVAVTRARRHVAI 606
Query: 787 IGNPHIVSKDPYWHQLL 803
I + V + +LL
Sbjct: 607 ICDSRTVGSQAFLGRLL 623
Score = 181 (68.8 bits), Expect = 3.5e-32, Sum P(2) = 3.5e-32
Identities = 64/187 (34%), Positives = 94/187 (50%)
Query: 311 GFIHRVEADEVHLKF--ASDFQLNHRDENLYNV-----QFTYNRV----NMRRLYQATDA 359
G I RV + V + F + D L+ E+ Y + TYNR+ N + Y A
Sbjct: 100 GIITRVTSKAVTVAFEESRDGMLSVDHESSYRLLKLANDITYNRIKKALNTLKQYHGGPA 159
Query: 360 AQELDTEF--LFPSESSGIRLIESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGPP 417
+ +D F L PS SS E+ L + +L+ Q ++ L K +++GPP
Sbjct: 160 SDLIDVLFFSLDPSPSS-----ETKPLKLYNDSLDASQREAVSFSLAQKELA--IVHGPP 212
Query: 418 GTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAP 477
GTGKT T+VE ILQ A ++ ++L CAPSN A D+L+E++ G KA I RL P
Sbjct: 213 GTGKTTTVVEIILQ--AVQQGLKVLCCAPSNVAVDNLVERLAGYKA------RILRLGHP 264
Query: 478 SRPYEDV 484
+R E +
Sbjct: 265 ARLLEPI 271
Score = 43 (20.2 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 6/25 (24%), Positives = 16/25 (64%)
Query: 597 CEPYCHGNENYVTKLVRNYRSHPQI 621
C+ G++ ++ +L+ ++R H Q+
Sbjct: 608 CDSRTVGSQAFLGRLLEHFRQHGQV 632
>MGI|MGI:99954 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006412 "translation"
evidence=NAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IMP]
[GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032575 "ATP-dependent 5'-3' RNA helicase activity"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=ISO;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154
SMART:SM00382 SMART:SM00393 MGI:MGI:99954 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006412 GO:GO:0030424 GO:GO:0043025
GO:GO:0008270 GO:GO:0051260 GO:GO:0006351 GO:GO:0043621
GO:GO:0043022 GO:GO:0030426 GO:GO:0021522 GO:GO:0030529
GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:L10075
IPI:IPI00113033 PIR:S35633 UniGene:Mm.3179
ProteinModelPortal:P40694 SMR:P40694 IntAct:P40694 STRING:P40694
PhosphoSite:P40694 PaxDb:P40694 PRIDE:P40694 UCSC:uc008fwa.1
InParanoid:P40694 CleanEx:MM_IGHMBP2 Genevestigator:P40694
GermOnline:ENSMUSG00000024831 Uniprot:P40694
Length = 993
Score = 265 (98.3 bits), Expect = 9.5e-32, Sum P(2) = 9.5e-32
Identities = 93/317 (29%), Positives = 147/317 (46%)
Query: 532 HFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYL 591
+F + +DE QA E +P+ K +LAGD QL P S A G+ +S +
Sbjct: 367 YFDVVVVDECAQALEASCWIPLLKAPK----CILAGDHRQLPPTTVSHRAALAGLSRSLM 422
Query: 592 ERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL 651
ERL E HG V L YR H I+ S+ Y + + + L +
Sbjct: 423 ERLAEK----HG-AGVVRMLTVQYRMHQAIMCWASEAMYHGQFTSHPSVAGHLLKDLPGV 477
Query: 652 PNKE---FPVLFFGIQGC---DEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGV 705
+ E P+L GC + E + S N EV V IQ L G + DI V
Sbjct: 478 TDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAG-VQAGDIAV 536
Query: 706 ITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLG 765
I PY QV L ++L + + P++++ SV+ FQG+E++ ++++ VRS +RK +G
Sbjct: 537 IAPYNLQVDLLRQSLSNKH-PELEIKSVDGFQGREKEAVLLTFVRS-------NRKGEVG 588
Query: 766 FLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPEREEFAD 825
FL+ RR NVAVTRA + +I + H V+ + L+ Y +++ + A ++
Sbjct: 589 FLAEDRRINVAVTRARRHVAVICDSHTVNNHAFLETLVDYFTEHGEVR-TAFEYLDDIVP 647
Query: 826 EDPTAAECWNHEEEIPQ 842
E+ T H +P+
Sbjct: 648 ENYTHEGSQGHSR-VPK 663
Score = 174 (66.3 bits), Expect = 9.5e-32, Sum P(2) = 9.5e-32
Identities = 65/207 (31%), Positives = 101/207 (48%)
Query: 289 SLVNGDFIFAKHAYEDTSSAYQGFIHRVEADEVHLKF--ASDFQLNHRDENLYNVQFTYN 346
S +GD + E++ A G + R+ V + F + D QLN EN Y + N
Sbjct: 82 SFTSGDIVGLYDTNENSQLA-TGVLTRITQKSVTVAFDESHDLQLNLDRENTYRLLKLAN 140
Query: 347 RVNMRRLYQATDAAQELDTEFLFPSESSGIRLIESNT------LVPIS---CNLNEEQMC 397
V +RL +A ++ + P+ S L+ S+T + P+S L+ Q
Sbjct: 141 DVTYKRLKKALMTLKKYHSG---PASSLIDILLGSSTPSPAMEIPPLSFYNTTLDLSQKE 197
Query: 398 SIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEK 457
++ L K +I+GPPGTGKT T+VE ILQ A ++ ++L CAPSN A D+L+E+
Sbjct: 198 AVSFALAQKELA--IIHGPPGTGKTTTVVEIILQ--AVKQGLKVLCCAPSNIAVDNLVER 253
Query: 458 ILGEKAVEVRENEIFRLNAPSRPYEDV 484
+ + + I RL P+R E V
Sbjct: 254 LA------LCKKRILRLGHPARLLESV 274
>UNIPROTKB|E2RBM4 [details] [associations]
symbol:PRIC285 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AAEX03014158 Ensembl:ENSCAFT00000020582 OMA:RCQYAHS
Uniprot:E2RBM4
Length = 2919
Score = 410 (149.4 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 146/467 (31%), Positives = 225/467 (48%)
Query: 341 VQFTYNRVNMRRLYQATDAAQELDTEFLFPSESSGIRLIESNTLVPISCNLNEEQMCSIE 400
VQF + + R +QA DA E E L + L + P + N +Q ++
Sbjct: 716 VQFQVDPLTFRFWHQAVDALPE---ERLVVPDLPTCNLPHPLPIPP-AMQGNRKQKLAVA 771
Query: 401 KILGLK-GA--P--PYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAAD-HL 454
I G G P P LIYGP GTGKT TL A L++ + ++L+C +NSAAD ++
Sbjct: 772 FIAGSSPGGRRPIAPLLIYGPFGTGKTYTLAMASLEVIR-QPHTKVLICTHTNSAADIYI 830
Query: 455 LEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFF--DEQIFKCPPLAALVCYRI 512
E G + E R+ RP +A +++C D + F+ P A L +RI
Sbjct: 831 EEHFHGYVSSGHPEAAPLRVMYTDRPPSQTDATVLQYCCLTQDRRAFRAPTRAELEQHRI 890
Query: 513 IISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQL 572
+++T A + V G FSHI +DEA Q E E++ P+ Y T VVLAGD MQ+
Sbjct: 891 VVTTTSQARELR---VPAGFFSHILIDEAAQMLECEALTPLR-YAAPGTRVVLAGDHMQV 946
Query: 573 GPVIYSREAETYGMGKSYLERLFE-CEPYCHGNENYVTKLV--RNYRSHPQILHLPSKLF 629
P ++S G + L RLF+ + H ++L+ +NYRS IL S+ F
Sbjct: 947 TPRLFS-VPRAQAAGHTLLYRLFQHYQREAHEVAQR-SRLIFHQNYRSTEAILSFVSRHF 1004
Query: 630 YEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEII 689
Y K I + + P P++F + G ER+ S+ SW N EV++VVE +
Sbjct: 1005 Y-----VAKGSPIHASGRVPPHPRLH-PLMFCHVAGNPERDLSSTSWLNAAEVAQVVEQV 1058
Query: 690 QKL-----TSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVI 744
+ L + G ++ I V++ + QV L + L + + VGS E G+E +V+
Sbjct: 1059 RDLHDGWPSCWGAREQKHICVVS-HGAQVTALRQELRKRNLGQVSVGSFEILPGREFRVV 1117
Query: 745 IVSTVRSTIKHNDF--DRKHCLGFLSNPRRFNVAVTRAISLLIIIGN 789
++STV + H+ LGF ++ R N +TRA S ++ +GN
Sbjct: 1118 VLSTVHN---HHSLLSSGTASLGFFTDARVLNTIMTRAQSQVVAVGN 1161
Score = 340 (124.7 bits), Expect = 7.5e-26, Sum P(4) = 7.5e-26
Identities = 98/315 (31%), Positives = 163/315 (51%)
Query: 510 YRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDP 569
+R+I+ T A+ +D I +DEAG A+EPE+++P+ ++ K + VV+L GD
Sbjct: 2604 HRVILCTCSCAASASLRKLD---VRQILIDEAGMATEPETLIPLVAFSKAEKVVLL-GDH 2659
Query: 570 MQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLF 629
QL PV+ + + + G+ +S ER Y H + + L YR H I PS F
Sbjct: 2660 KQLRPVVKNEQLQNLGLDRSLFER------Y-HVDAHM---LDTQYRMHEGICAFPSMEF 2709
Query: 630 YEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDER------EGSNPSWFNRIEVS 683
YE++L + + L + + V+F +QG ++ EG+ S N EV+
Sbjct: 2710 YEKKLKTWQGLRRP-PSILGHIGKESCSVIFGHVQGHEQSLLVSTDEGNENSKANPEEVA 2768
Query: 684 KVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQV 743
VV I ++LT + +D+ ++TPY Q +++K L + + V S+ + QG E +
Sbjct: 2769 AVVRIAKQLTLGRTVEPKDVAILTPYNAQAAEISKRLVREGVSGVTVCSITKSQGSEWRY 2828
Query: 744 IIVSTVRSTIKHNDFDR-------KHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKD 796
++VSTVR T + +D D+ K LGF+ +P + NVA+TRA L +IG+ ++S
Sbjct: 2829 VLVSTVR-TCQESDLDQRPTKSWLKRFLGFVVDPNQVNVAITRAREGLCVIGDHRLLSCC 2887
Query: 797 PYWHQLLWYCSDNNS 811
P W + L +C S
Sbjct: 2888 PLWRRFLDFCEAQRS 2902
Score = 68 (29.0 bits), Expect = 7.5e-26, Sum P(4) = 7.5e-26
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDAR---------------LLVCAPSNSAADHLLE 456
+I GPPGTGKT+ + + + E+ +L C PSN + D L
Sbjct: 2441 VIQGPPGTGKTVVAFHIVFWFHKSNEEQTGACDTPREKQLGGPCILYCGPSNKSVDVLAG 2500
Query: 457 KILGEKAVEVRENEIFRLNAPSRPY 481
+L +A E++ ++ A + +
Sbjct: 2501 LLLSRRA-ELKPLRVYSEQAEATEF 2524
Score = 42 (19.8 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 119 EERMIQPGQTLTIWLSCKPKGIGLHT 144
EER +PGQ + L C+ + H+
Sbjct: 273 EERTARPGQAPRVKLYCRACLVTCHS 298
Score = 41 (19.5 bits), Expect = 7.5e-26, Sum P(4) = 7.5e-26
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 176 PYSRGGRKKQFSVDKYVVGSRPARYR 201
P +G RK++ +V ++ GS P R
Sbjct: 758 PAMQGNRKQKLAV-AFIAGSSPGGRR 782
Score = 40 (19.1 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 14/55 (25%), Positives = 21/55 (38%)
Query: 771 RRFNVAVTRAIS--LLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQG-CALPEREE 822
R N AV A+ +I G P +H + W+ N G C P ++
Sbjct: 2425 RSQNRAVRAALKKQFTVIQGPPGTGKTVVAFHIVFWFHKSNEEQTGACDTPREKQ 2479
Score = 38 (18.4 bits), Expect = 4.7e-31, Sum P(3) = 4.7e-31
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 807 SDNNSYQGCALPEREEFADEDPTAAECWNHEEEI 840
+ N+ G E + D + T ++ W + E+
Sbjct: 1270 ASRNAVAGLTATENRDPEDPEDTESDFWPSDTEL 1303
>POMBASE|SPAC6G9.10c [details] [associations]
symbol:sen1 "ATP-dependent 5' to 3' DNA/RNA helicase
Sen1" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006369
"termination of RNA polymerase II transcription" evidence=ISO]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0035649 "Nrd1 complex"
evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0043144 "snoRNA processing"
evidence=ISO] InterPro:IPR024714 PomBase:SPAC6G9.10c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006397
GO:GO:0008033 eggNOG:COG1112 GO:GO:0006364 GO:GO:0006369
GO:GO:0043144 GO:GO:0043141 GO:GO:0016180 KO:K10706 GO:GO:0035649
PIR:T39072 RefSeq:NP_594119.1 ProteinModelPortal:Q92355
EnsemblFungi:SPAC6G9.10c.1 GeneID:2541556 KEGG:spo:SPAC6G9.10c
OrthoDB:EOG4BCHWF NextBio:20802652 GO:GO:0032575 InterPro:IPR024481
PANTHER:PTHR10887:SF164 Pfam:PF12726 Uniprot:Q92355
Length = 1687
Score = 332 (121.9 bits), Expect = 5.6e-30, Sum P(2) = 5.6e-30
Identities = 96/279 (34%), Positives = 142/279 (50%)
Query: 532 HFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYL 591
+FS + +DEA QA E ++++P+ KK +L GDP QL P + S++A + +S
Sbjct: 1371 NFSTVIIDEAAQAVELDTIIPLRYGAKK---CILVGDPNQLPPTVLSKKAASLNYSQSLF 1427
Query: 592 ERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL 651
R+ + N + L YR HP I H PSK FY+ L D T + +
Sbjct: 1428 VRIQK------NFSNQMCLLSIQYRMHPDISHFPSKKFYDSRL-EDGDNMAEKTQQVWHV 1480
Query: 652 PNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTG---NLSEEDIGVITP 708
K F ++G ER + S +N EV +V ++ +L + N + IGVITP
Sbjct: 1481 NPKFTQYRLFDVRG-KERTSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFTGR-IGVITP 1538
Query: 709 YRQQVLKLNKALESLY----MPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCL 764
YR Q+ +L +A + Y M I + +V+ FQGQE+ +I S V+S KH +
Sbjct: 1539 YRSQLHELRRAFKVKYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHG-------I 1591
Query: 765 GFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLL 803
GFL + RR NVA+TRA S L+IIGN + D W L+
Sbjct: 1592 GFLRDFRRLNVALTRARSSLLIIGNMETLKTDDLWGSLV 1630
Score = 94 (38.1 bits), Expect = 5.6e-30, Sum P(2) = 5.6e-30
Identities = 37/111 (33%), Positives = 53/111 (47%)
Query: 391 LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLV---EAIL-------------QLYA 434
+NE Q +I L G LI GPPGTGKT T++ A+L Q +
Sbjct: 1130 VNEPQAKAIMCALDNNGFT--LIQGPPGTGKTKTIIGIISALLVDLSRYHITRPNQQSKS 1187
Query: 435 TREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVN 485
T ++L+CAPSN+A D +L ++ +E E I R+ P E +N
Sbjct: 1188 TESKQQILLCAPSNAAVDEVLLRLKRGFLLENGEKYIPRVVRIGNP-ETIN 1237
>ZFIN|ZDB-GENE-070402-1 [details] [associations]
symbol:setx "senataxin" species:7955 "Danio rerio"
[GO:0006302 "double-strand break repair" evidence=IEA]
InterPro:IPR026121 ZFIN:ZDB-GENE-070402-1 GO:GO:0006302
InterPro:IPR024481 Pfam:PF12726 GeneTree:ENSGT00580000081652
PANTHER:PTHR10887:SF15 EMBL:CU927918 IPI:IPI00481119
Ensembl:ENSDART00000082314 Ensembl:ENSDART00000149777
Uniprot:E7FBJ2
Length = 2368
Score = 311 (114.5 bits), Expect = 8.4e-29, Sum P(2) = 8.4e-29
Identities = 96/302 (31%), Positives = 148/302 (49%)
Query: 512 IIISTYMSASLIYAEGVDR--GH--FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAG 567
+I T ++ I E R GH FS + +DEA QA E E+++P+ C V+L G
Sbjct: 1930 VICCTLSTSGSIVLENAFRRLGHEPFSCVIIDEASQAKETETLIPMLYRCPS---VILVG 1986
Query: 568 DPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENY--VTKLVRNYRSHPQILHLP 625
DP QL P + S++A+ +G +S + RL C+ N + L YR HP I P
Sbjct: 1987 DPNQLPPTVVSQKAKEFGFDQSLMARL--CKSLHPSNSKLPPILLLSMQYRMHPDICEFP 2044
Query: 626 SKLFYEEELIA-CKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSK 684
SK Y L C+ C+ F P K F V+ G + +E S+ N EVS
Sbjct: 2045 SKYIYNSALKNDCETAQKRCSLSWPFKPYKVFDVM----DGRETKE--RDSFINHKEVS- 2097
Query: 685 VVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMP---DIKVGSVEQFQGQER 741
+V ++ KL +GVITPY Q ++ A+++ + ++V +V+ FQG+E
Sbjct: 2098 LVGLLLKLLCKEQAVR--VGVITPYNAQKHRILDAIKTSGINKQLQVEVDTVDGFQGREM 2155
Query: 742 QVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQ 801
IIVS VR++ + +GF+ N +R NV +TRA L I+G+ + + W
Sbjct: 2156 DCIIVSCVRASSEMGS------IGFVGNRQRMNVTITRAKFSLFILGHLRTLREQSDWGA 2209
Query: 802 LL 803
L+
Sbjct: 2210 LI 2211
Score = 108 (43.1 bits), Expect = 8.4e-29, Sum P(2) = 8.4e-29
Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 397 CSIEKILGLKGAPPYL-IYGPPGTGKTMTLVEAILQLY--ATREDA------------RL 441
C I I + P +L I+GPPGTGK+ T+ + +L AT A R+
Sbjct: 1725 CGIAMIHRKQKTPKFLLIHGPPGTGKSKTIGGLLYKLLSSATNSSATVGNLHSKSRRTRV 1784
Query: 442 LVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVN 485
L+CAPSN+A D L++K+ + + + + +NAP D+N
Sbjct: 1785 LLCAPSNAAIDSLMKKV-----ILIFKEKCRNINAPQGNCGDIN 1823
Score = 40 (19.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 446 PSNSAADHLLEK 457
PSN+A DHL K
Sbjct: 1334 PSNAANDHLFLK 1345
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 325 (119.5 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 96/304 (31%), Positives = 157/304 (51%)
Query: 512 IIISTYMSASLIYAEGVDRGH----FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAG 567
+I T ++ + E RG FS + +DEAGQ+ E E++ P+ C K +VL G
Sbjct: 2127 VICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLSPLIHRCNK---LVLVG 2183
Query: 568 DPMQLGPVIYSREAETYGMGKSYLERLFEC-EPYCHGN---ENYVTKLVRNYRSHPQILH 623
DP QL P + S +A+ YG +S + R + E N V +L YR HP I
Sbjct: 2184 DPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICL 2243
Query: 624 LPSKLFYEEELIACK-DESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEV 682
PS Y + L + E+I C++ F P F V G G ++R+ N S+ N E+
Sbjct: 2244 FPSNYVYNKNLKTNRLTETIRCSSEWPFQPYLVFDV---G-DGSEQRD--NDSYINVQEI 2297
Query: 683 SKVVEIIQKLTSTG-NLSEEDIGVITPYRQQVLKLNKALESLY--MPDIKVGSVEQFQGQ 739
V+EII+ + ++S +IG+IT Y+ Q + K LE + +V +V+ FQG+
Sbjct: 2298 KLVMEIIKLIKEKRKDISFRNIGIITHYKAQKTMIQKDLEKEFDKKGPAEVDTVDAFQGR 2357
Query: 740 ERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYW 799
++ IIV+ VR++ +GFL++ +R NV +TRA L I+G+ + ++ +W
Sbjct: 2358 QKDCIIVTCVRASAVQGS------IGFLASLQRLNVTITRAKYSLFILGHLRTLMENQHW 2411
Query: 800 HQLL 803
++L+
Sbjct: 2412 YELI 2415
Score = 104 (41.7 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 34/107 (31%), Positives = 57/107 (53%)
Query: 412 LIYGPPGTGKTMTLVEAILQLY--------------ATREDARLLVCAPSNSAADHLLEK 457
LI+GPPGTGK+ T+V + +L A + R+LVCAPSN+A D L++K
Sbjct: 1937 LIHGPPGTGKSKTIVGLLYRLLTESQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 1996
Query: 458 ILGE--KAVEVRENEIFR---LNAPSR-PYEDVNADHIRFCFFDEQI 498
I+ E + + ++N + +N P + +N + ++F D Q+
Sbjct: 1997 IILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINTEVLKFSL-DSQV 2042
Score = 66 (28.3 bits), Expect = 8.4e-26, Sum P(2) = 8.4e-26
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 213 DIPNHIRELIERKQIPDAITDGLT 236
D+P+HI+E++ RK+I DA D L+
Sbjct: 2049 DLPSHIQEMLRRKEILDAQLDELS 2072
Score = 45 (20.9 bits), Expect = 2.6e-28, Sum P(4) = 2.6e-28
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 299 KHAYEDTSSAYQGFIHRVEADEV 321
+H+ +D S Y G++H+ V
Sbjct: 1804 RHSVQDRSHYYCGYVHKFRRTSV 1826
Score = 40 (19.1 bits), Expect = 2.6e-28, Sum P(4) = 2.6e-28
Identities = 8/38 (21%), Positives = 22/38 (57%)
Query: 239 NYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYL 276
+Y +++ L+ +EE +L + + + + V L+ + Y+
Sbjct: 1765 DYKKYWEFLIYLEESELAKQLHPKENDLVFLVPEKKYM 1802
Score = 40 (19.1 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 13/45 (28%), Positives = 27/45 (60%)
Query: 151 VEDRIERVVFLLAE-DKISQSLASKRPYSRGGRKKQFS-VDKYVV 193
+++ + R L A+ D++S+ +R RGGR+ Q +D+++V
Sbjct: 2054 IQEMLRRKEILDAQLDELSR----QRALCRGGREMQRQELDEHIV 2094
Score = 39 (18.8 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 315 RVEADEVHLKFASDFQLNHRDENLYN 340
+V+ DE+ K + + HR L N
Sbjct: 776 KVQKDEICAKLSHVLKKQHRKSTLVN 801
Score = 38 (18.4 bits), Expect = 4.2e-28, Sum P(4) = 4.2e-28
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 245 KTLLIMEEIQLKEDMRAYDMENVTLMRKG 273
K+ L+ I L+E+ D+EN + +G
Sbjct: 796 KSTLVNNIIDLEENAATSDLENCSGTDRG 824
Score = 38 (18.4 bits), Expect = 1.4e-21, Sum P(4) = 1.4e-21
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 323 LKFASDFQLNHR 334
LKF+ D Q++HR
Sbjct: 2034 LKFSLDSQVSHR 2045
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 336 (123.3 bits), Expect = 2.2e-28, Sum P(4) = 2.2e-28
Identities = 100/291 (34%), Positives = 153/291 (52%)
Query: 521 SLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSRE 580
S + +G+D FS + +DEAGQ+ E E+++P+ C K +VL GDP QL P I S +
Sbjct: 2188 SAFWRQGLDP--FSCVIVDEAGQSCEVETLIPLIHRCNK---LVLVGDPRQLPPTIKSIK 2242
Query: 581 AETYGMGKSYLERLFE-CEPYCHGN---ENYVTKLVRNYRSHPQILHLPSKLFYEEELIA 636
A+ YG G+S + RL E N V +L YR HP I PS Y++ L
Sbjct: 2243 AQEYGYGQSLMARLQRHLEEQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYIYDKTLKT 2302
Query: 637 CK-DESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTST 695
K E C++ F P F V G G +ER+ S+ N EV V+EII+ +
Sbjct: 2303 DKATEENRCSSEWPFQPYLVFDV---G-DGHEERD--KDSFSNPQEVKLVLEIIRTIKEK 2356
Query: 696 G-NLSEEDIGVITPYRQQVLKLNKALESLYMPDI--KVGSVEQFQGQERQVIIVSTVRST 752
+L IG+ITPY Q K+ + L+ ++ + +V +V+ FQG+E+ IIV+ VR+
Sbjct: 2357 RKDLGLRRIGIITPYSAQKKKIQEELDRVFKNNSPGEVDTVDAFQGREKDCIIVTCVRAN 2416
Query: 753 IKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLL 803
K +GFL++ +R NV +TRA L I+G + ++ W++L+
Sbjct: 2417 ------SSKGSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKDWNKLI 2461
Score = 102 (41.0 bits), Expect = 2.2e-28, Sum P(4) = 2.2e-28
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYA--TREDA-----------RLLVCAPSNSAADHLLEKI 458
LI+GPPGTGK+ T+V + ++ TR + R LVCAPSN+A D L++KI
Sbjct: 1984 LIHGPPGTGKSKTIVGLLSRVLRENTRNEKTSKKNAKIKQNRFLVCAPSNAAIDELMKKI 2043
Query: 459 L 459
+
Sbjct: 2044 I 2044
Score = 38 (18.4 bits), Expect = 2.2e-28, Sum P(4) = 2.2e-28
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 235 LTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSL 278
+ + Y +F T + + E + +EN + K YL L
Sbjct: 1759 IRFQGYNDYFNTFFPLMMLNAFETLAQEWVENQKMKDKTYYLHL 1802
Score = 37 (18.1 bits), Expect = 2.2e-28, Sum P(4) = 2.2e-28
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 56 SVSVGETAVDSITIKNTTREPVELWSKIYASTP 88
SVS A S ++N ++P L S+ + P
Sbjct: 1619 SVSSSRNAAFSKDLENVEKQPPALKSRASIAKP 1651
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 320 (117.7 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 97/305 (31%), Positives = 157/305 (51%)
Query: 512 IIISTYMSASLIYAEGVDRGH----FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAG 567
II T ++ + E RG FS + +DEAGQ+ E E++ P+ C K ++L G
Sbjct: 2150 IICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCNK---LILVG 2206
Query: 568 DPMQLGPVIYSREAETYGMGKSYLER---LFECEPYCHG--NENYVTKLVRNYRSHPQIL 622
DP QL P + S +A+ YG +S + R L E E H + + +L YR HP I
Sbjct: 2207 DPKQLPPTVISMKAQEYGYDQSMMARFCRLLE-ENVEHNMISRLPILQLTVQYRMHPDIC 2265
Query: 623 HLPSKLFYEEELIACKD-ESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIE 681
PS Y L + E+I C++ F P F V G G + R+ N S+ N E
Sbjct: 2266 LFPSNYVYNRNLKTNRQTEAIRCSSDWPFQPYLVFDV---G-DGSERRD--NDSYINVQE 2319
Query: 682 VSKVVEIIQKLTSTG-NLSEEDIGVITPYRQQVLKLNKALESLY--MPDIKVGSVEQFQG 738
+ V+EII+ + ++S +IG+IT Y+ Q + K L+ + +V +V+ FQG
Sbjct: 2320 IKLVMEIIKLIKDKRKDVSFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDAFQG 2379
Query: 739 QERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPY 798
+++ +IV+ VR+ N +GFL++ +R NV +TRA L I+G+ + ++ +
Sbjct: 2380 RQKDCVIVTCVRA----NSIQGS--IGFLASLQRLNVTITRAKYSLFILGHLRTLMENQH 2433
Query: 799 WHQLL 803
W+QL+
Sbjct: 2434 WNQLI 2438
Score = 105 (42.0 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 34/107 (31%), Positives = 59/107 (55%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATRE---------DA-----RLLVCAPSNSAADHLLEK 457
LI+GPPGTGK+ T+V + +L + +A R+LVCAPSN+A D L++K
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2019
Query: 458 ILGE--KAVEVRENEIFR---LNAPSR-PYEDVNADHIRFCFFDEQI 498
I+ E + + ++N + +N P + +N++ ++F D Q+
Sbjct: 2020 IILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINSEVLKFSL-DSQV 2065
Score = 49 (22.3 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 432 LYATREDARLL-VCAPSNSAADHLLEKILGEKAVEVRENEIFR 473
L+ T+ D + +C+ + L+E I G+ VEV E+ + R
Sbjct: 1496 LFLTQNDPEDMDLCSQMENDNYKLIELIHGKDTVEVEEDSVSR 1538
Score = 43 (20.2 bits), Expect = 7.6e-23, Sum P(2) = 7.6e-23
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 207 NRLPRYDIPNHIRELIERKQIPDAITDGLT 236
N + ++P+H++ + +RK+ D D L+
Sbjct: 2066 NHRMKKELPSHVQAMHKRKEFLDYQLDELS 2095
Score = 43 (20.2 bits), Expect = 2.0e-21, Sum P(3) = 2.0e-21
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 323 LKFASDFQLNHR 334
LKF+ D Q+NHR
Sbjct: 2057 LKFSLDSQVNHR 2068
Score = 42 (19.8 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 20/89 (22%), Positives = 31/89 (34%)
Query: 284 AERRPSLVNGDFIFAKHAYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHRD----ENLY 339
A + S N DF A TS +V+ DE+ K + + HR +N
Sbjct: 754 ALEKVSTSNEDFSLKDDALAKTSKRKT----KVQKDEICAKLSHVIKKQHRKSTLVDNTI 809
Query: 340 NVQFTYNRVNMRRLYQATDAAQELDTEFL 368
N+ N+ Y D + F+
Sbjct: 810 NLDENLTVSNIESFYSRKDTGVQKGDGFI 838
Score = 37 (18.1 bits), Expect = 8.2e-28, Sum P(3) = 8.2e-28
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 245 KTLLIMEEIQLKEDMRAYDMEN 266
K LL +E+Q++ +R +N
Sbjct: 1340 KKLLTSQELQMQRQIRPKSQKN 1361
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 325 (119.5 bits), Expect = 5.3e-28, Sum P(4) = 5.3e-28
Identities = 96/304 (31%), Positives = 156/304 (51%)
Query: 512 IIISTYMSASLIYAEGVDRGH----FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAG 567
+I T ++ + E RG FS + +DEAGQ+ E E++ P+ C K ++L G
Sbjct: 2126 VICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLSPLIHRCNK---LILVG 2182
Query: 568 DPMQLGPVIYSREAETYGMGKSYLERLFEC-EPYCHGN---ENYVTKLVRNYRSHPQILH 623
DP QL P + S +A+ YG +S + R + E N V +L YR HP I
Sbjct: 2183 DPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICL 2242
Query: 624 LPSKLFYEEELIACK-DESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEV 682
PS Y + L + ESI C++ F P F V G G + R+ N S+ N E+
Sbjct: 2243 FPSNYVYNKNLKTNRLTESIRCSSEWPFQPYLVFDV---G-DGSERRD--NDSYINVQEI 2296
Query: 683 SKVVEIIQKLTSTG-NLSEEDIGVITPYRQQVLKLNKALESLY--MPDIKVGSVEQFQGQ 739
V+EII+ + ++S +IG+IT Y+ Q + K LE + +V +V+ FQG+
Sbjct: 2297 KLVMEIIKLIKEKRKDISFRNIGIITHYKAQKTMIQKDLEKEFDKKGPAEVDTVDAFQGR 2356
Query: 740 ERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYW 799
++ IIV+ VR++ +GFL++ +R NV +TRA L I+G+ + ++ +W
Sbjct: 2357 QKDCIIVTCVRASAVQGS------IGFLASLQRLNVTITRAKYSLFILGHLRTLMENQHW 2410
Query: 800 HQLL 803
++L+
Sbjct: 2411 YELI 2414
Score = 104 (41.7 bits), Expect = 5.3e-28, Sum P(4) = 5.3e-28
Identities = 34/107 (31%), Positives = 58/107 (54%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATRE---------DA-----RLLVCAPSNSAADHLLEK 457
LI+GPPGTGK+ T+V + +L + +A R+LVCAPSN+A D L++K
Sbjct: 1936 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 1995
Query: 458 ILGE--KAVEVRENEIFR---LNAPSR-PYEDVNADHIRFCFFDEQI 498
I+ E + + ++N + +N P + +N + ++F D Q+
Sbjct: 1996 IILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINTEVLKFSL-DSQV 2041
Score = 68 (29.0 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 207 NRLPRYDIPNHIRELIERKQIPDAITDGLT 236
N + D+P+HI+E++ RK+I DA D L+
Sbjct: 2042 NHRMKKDLPSHIQEMLRRKEILDAQLDELS 2071
Score = 44 (20.5 bits), Expect = 5.3e-28, Sum P(4) = 5.3e-28
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 299 KHAYEDTSSAYQGFIHRVEADEV 321
+H +D S Y G++H+ V
Sbjct: 1803 RHGMQDCSHYYCGYVHKFRRTSV 1825
Score = 43 (20.2 bits), Expect = 8.8e-22, Sum P(4) = 8.8e-22
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 323 LKFASDFQLNHR 334
LKF+ D Q+NHR
Sbjct: 2033 LKFSLDSQVNHR 2044
Score = 38 (18.4 bits), Expect = 5.3e-28, Sum P(4) = 5.3e-28
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 39 DPVQISFPFPFIDGKPQSVSVGETA 63
D V +S +DG +V VGE A
Sbjct: 1437 DVVMVSASEDPVDGGAVTVQVGEVA 1461
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 354 (129.7 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 114/371 (30%), Positives = 182/371 (49%)
Query: 391 LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSA 450
LN Q SIE L KG LI GPPGTGKT T+ + L A + ++LVC PS+++
Sbjct: 1243 LNTSQFNSIETSLSTKGIT--LIQGPPGTGKTTTIYYLLSILLAINPEFKILVCGPSHAS 1300
Query: 451 ADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNAD-HIRFCFFDEQIFKCPPLAALVC 509
D + ++ +K + + E+++ D H F Q K +
Sbjct: 1301 VDEIAKRCSKKKLIGLDGKPYLPNMVRIGKKENISPDCHSISIFNKTQREKSDSI----- 1355
Query: 510 YR--IIISTYMSASLIYAEGVDRGHFSHIFL-DEAGQASEPESMVPIS-SYCKKDTVVVL 565
YR I+ ST +S S +E V + I L DE+ Q++EP S++P+ +K ++L
Sbjct: 1356 YRASIVFST-LSGS--GSETVKNNFRADIILVDESTQSTEPSSIIPLCIGNIEK---LIL 1409
Query: 566 AGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLP 625
GDP+QL P I+S E+ G+ S ERL + P V L YR HP I P
Sbjct: 1410 VGDPLQLPPTIFSTESAENGLNISLFERLSKVLP--------VEMLHVQYRMHPTISRFP 1461
Query: 626 SKLFYEEELIACKDESISCTAYL--NFLPNKEF-PVLFFGIQGCDEREGSNPSWFNRIEV 682
S FY + L+ +++ Y NF + ++ P+ F+ + E G S N++E+
Sbjct: 1462 SNQFYRDRLL--DGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKR-SLKNKLEI 1518
Query: 683 SKVVEIIQKLTST-GNLSEEDIGVITPYRQQVLKLNKALESLYMP-DIKVGSVEQFQGQE 740
+ V +I+KL + G+ITPY+ Q ++ + + P +I+ +++ FQG E
Sbjct: 1519 TMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLNIETSTIDGFQGSE 1578
Query: 741 RQVIIVSTVRS 751
+ +II+S VRS
Sbjct: 1579 KDIIILSCVRS 1589
Score = 298 (110.0 bits), Expect = 8.0e-21, Sum P(3) = 8.0e-21
Identities = 93/314 (29%), Positives = 149/314 (47%)
Query: 563 VVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQIL 622
++L GDP+QL P I+S E+ G+ S ERL + P V L YR HP I
Sbjct: 1407 LILVGDPLQLPPTIFSTESAENGLNISLFERLSKVLP--------VEMLHVQYRMHPTIS 1458
Query: 623 HLPSKLFYEEELIACKDESISCTAYL--NFLPNKEF-PVLFFGIQGCDEREGSNPSWFNR 679
PS FY + L+ +++ Y NF + ++ P+ F+ + E G S N+
Sbjct: 1459 RFPSNQFYRDRLL--DGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKR-SLKNK 1515
Query: 680 IEVSKVVEIIQKLTST-GNLSEEDIGVITPYRQQVLKLNKALESLYMP-DIKVGSVEQFQ 737
+E++ V +I+KL + G+ITPY+ Q ++ + + P +I+ +++ FQ
Sbjct: 1516 LEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLNIETSTIDGFQ 1575
Query: 738 GQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDP 797
G E+ +II+S VRS +R +GFLS+ RR NVA+TRA L +IGN ++ KD
Sbjct: 1576 GSEKDIIILSCVRS-------ER---IGFLSDRRRINVALTRAKFGLFVIGNSKLLKKDR 1625
Query: 798 YWHQLLWYCSDNNSYQGCALPEREEFADEDPTAAECWNHEEEI-PQSFQEDNWNQEPFQA 856
W Y NS + ++ + N I P S ED ++ E
Sbjct: 1626 TWGPFCQYVHSINSMVSID-SKGISVLEQQIQEYDYLNPNGLIQPHSDSEDEYDDEDEDE 1684
Query: 857 ENLKPVKDEDEWSD 870
+ + D+D+ D
Sbjct: 1685 DEDEDEDDDDDDDD 1698
Score = 52 (23.4 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 17/72 (23%), Positives = 31/72 (43%)
Query: 35 PSEEDPVQISFPF---PFIDGKPQSVSVGETAVDSITIKNTTREPVELWSKIYASTPENT 91
PS P+ P P I PQ+++ ++ ++ ++ TT + +TP T
Sbjct: 612 PSLSAPINPGKPNEAQPTIKQIPQTIASTKSVIEPDSLSPTTTTTTTTTTTTTTTTPTTT 671
Query: 92 FTLSVMKPPSPG 103
S+ P +PG
Sbjct: 672 TLPSLPAPINPG 683
Score = 49 (22.3 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 36/182 (19%), Positives = 72/182 (39%)
Query: 215 PNHIRELIERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMR--K 272
P E I + D++ D ++NY F++ + +E+ LK + + + + ++
Sbjct: 295 PQITTETINSSILIDSLED---IENYFPTFQSKI--QEVLLKSSSKFFLLRKINNVKYTA 349
Query: 273 GLYLSLVVPGLAERRPSLVNGDFIFAKHAYEDTSSA--------YQGFIHRVEADEVHLK 324
+++S P +R L + K ED + I+++ +D +L
Sbjct: 350 SIHVSSKFPTFFQRNDLLYYNNNNNNKDEDEDEDEGEDEDEDDIIKRNIYQLYSDYSNLN 409
Query: 325 FASDFQLNHRDENLYNVQFTYNRVNMRRLYQATDAAQELDTE-FLFPSESSGIRLIESNT 383
F +F + +Q R+ + Q LD E +FPS+ LIE T
Sbjct: 410 FLIEFSFFFKRLTSNRIQKIRGRIEIETSVQFEMPISFLDIEKCIFPSKLKK-ELIEFRT 468
Query: 384 LV 385
++
Sbjct: 469 VL 470
Score = 39 (18.8 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 48 PFIDGKPQSVSVGETAV--DSITIKNTTREPVELWSKIYASTPENTFTL----SVMKPPS 101
P I PQ+V+ ++ + DS++ TT +TP T T S+ P +
Sbjct: 560 PTIKQIPQTVASTKSVIGSDSLSPTITTTNTTTSIRPTTTTTPTTTTTTTSLPSLSAPIN 619
Query: 102 PG 103
PG
Sbjct: 620 PG 621
Score = 39 (18.8 bits), Expect = 8.0e-21, Sum P(3) = 8.0e-21
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 448 NSAADHLLEKILGEKAVEVRENEIFRLNAPSRP 480
NS L+ K+L + ++ +NE +N+ S P
Sbjct: 909 NSERLTLISKLLFNEIYQLIKNEKVLINSSSTP 941
>TAIR|locus:2018561 [details] [associations]
symbol:AT1G65810 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
EMBL:CP002684 GO:GO:0004386 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI01019905 RefSeq:NP_176757.1
UniGene:At.52388 ProteinModelPortal:F4IBK8 SMR:F4IBK8 PRIDE:F4IBK8
EnsemblPlants:AT1G65810.1 GeneID:842892 KEGG:ath:AT1G65810
OMA:DSEINKR ArrayExpress:F4IBK8 Uniprot:F4IBK8
Length = 1050
Score = 310 (114.2 bits), Expect = 7.7e-28, Sum P(3) = 7.7e-28
Identities = 100/307 (32%), Positives = 151/307 (49%)
Query: 536 IFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLF 595
+ +DEA Q E ES +P+ + +++ GD QL +I S A +G+S ERL
Sbjct: 556 LVIDEAAQLKECESAIPLQLRGLQHAILI--GDEKQLPAMIKSNIASEADLGRSLFERLV 613
Query: 596 ECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAY-LNFLPNK 654
G+ + + YR HP I P++ FY+ +++ S+ +Y FLP K
Sbjct: 614 LL-----GHNKQLLNM--QYRMHPSISIFPNREFYDMKILDAP--SVRLRSYEKKFLPEK 664
Query: 655 EF-PVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDI--GVITPYRQ 711
+ P F I E+ G S N +EVS V EI+ KL S + I GVI+PY+
Sbjct: 665 MYGPYSFINIAYGREQFGEGYSSKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYKA 724
Query: 712 QVLKLNKALESLYMPD----IKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFL 767
QV + + + Y + + V SV+ FQG E +II+STVRS + +GFL
Sbjct: 725 QVFAIQERIGEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRS-------NGNGAIGFL 777
Query: 768 SNPRRFNVAVTRAISLLIIIGNPHIVSKD-PYWHQLLWYCSDNNSYQGCALPEREEFADE 826
SN +R NVA+TRA L I+GN ++ + W QL+ D+ + C A+E
Sbjct: 778 SNQQRTNVALTRARYCLWILGNEATLTNNRSVWRQLV----DDAKARNCF-----HNAEE 828
Query: 827 DPTAAEC 833
D + A+C
Sbjct: 829 DESLAQC 835
Score = 92 (37.4 bits), Expect = 7.7e-28, Sum P(3) = 7.7e-28
Identities = 53/236 (22%), Positives = 95/236 (40%)
Query: 231 ITDGLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSL 290
+T +T + T + LL + ++ D R ++++ + L+LV G+ E P L
Sbjct: 107 VTLQMTNEYMTKGGQNLLEVNDLIAVTDKRPIRIDDLRFSHEPYLLALVC-GVNENNPHL 165
Query: 291 VNGDFIFAKHAYEDTSSAYQGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRV-- 348
+ + +K D + R + + L F +N N
Sbjct: 166 IT--ILASKPIIFDDDDDIKTSSKRGKGERKSLSFFGVNLINMMTNIRIWTALHPNPEGG 223
Query: 349 NMRRLYQATDAAQELDT-EFLFPSESSGIRLIESNTLVPISCNLNEEQMCSIEKILGLKG 407
N++ + + + E+D + E+S + + + + S LN Q +I + L K
Sbjct: 224 NLKLISRVLQSNNEVDGGSCVSCKENSESVVSDYSARMLRSFKLNSSQEDAILRCLEAKS 283
Query: 408 APPY----LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKIL 459
LI+GPPGTGKT T +L R R L CAP+N A + +++
Sbjct: 284 CNHSNNIKLIWGPPGTGKTKTTSVLLLNFLKMR--CRTLTCAPTNIAVLEVCSRLV 337
Score = 45 (20.9 bits), Expect = 7.7e-28, Sum P(3) = 7.7e-28
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 437 EDARLLVCAPSNSAADHL---LEKILGEKAVEVRENE 470
++A LL C S+SA H+ ++ ++ ++A +++E E
Sbjct: 532 DNAYLLFCTASSSARLHMSSPIQLLVIDEAAQLKECE 568
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 284 (105.0 bits), Expect = 7.8e-28, Sum P(3) = 7.8e-28
Identities = 86/267 (32%), Positives = 132/267 (49%)
Query: 564 VLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILH 623
+L GDP QL P S+ A + S +RL C G V K YR HP I
Sbjct: 1635 ILVGDPQQLPPTTISKVATKFQYEISLFQRLMNC-----GMAPTVLKT--QYRMHPMISK 1687
Query: 624 LPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWF---NRI 680
PSK+FY EL K+ Y N ++ P++F+ + D+ S+F N
Sbjct: 1688 FPSKIFYRGELEDGKNVREYKQDYYNDSASRFGPLVFYDL--FDKHGEVRSSFFSLRNPT 1745
Query: 681 EVSKVVEIIQKLTST-GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQ 739
EV I+ +L S N + +IGVITPY+ Q + L A + Y +++V +++ FQG+
Sbjct: 1746 EVKLAKLIVDQLISNYPNTKDLEIGVITPYKSQSVDLFNAFKG-YQ-NVEVSTIDGFQGK 1803
Query: 740 ERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYW 799
E+ +I S+VR+ H+ H +GFLS+ RR NV +TRA ++I+GN ++S + W
Sbjct: 1804 EKDFVIFSSVRA---HSG----HSIGFLSDIRRMNVGLTRAKYSMVILGNSSLLSNNDDW 1856
Query: 800 HQLLWYCSDNNSYQGCALPEREEFADE 826
L+ +D C P + D+
Sbjct: 1857 GNLV---NDLRQTNNCYFPISSKSIDK 1880
Score = 256 (95.2 bits), Expect = 8.0e-25, Sum P(3) = 8.0e-25
Identities = 94/311 (30%), Positives = 146/311 (46%)
Query: 454 LLEKILGEKAVEVRENEIFRLNAPSRPYE-DVNADHIRFCFFDEQIFKCPP-LAALVCYR 511
L E++ ++ ++R NEI +LN Y D+ F EQ L + R
Sbjct: 1526 LAERLKQQEDNKLR-NEITKLNYTREKYNNDLKLAKDEERRFHEQYSNTKRNLYINIIGR 1584
Query: 512 --IIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDP 569
II+ST + Y + +F + +DEA QA E +++P+ KK +L GDP
Sbjct: 1585 SQIILSTLSGSGYDYLFTATK-NFDLVIVDEAAQAVELSTLIPLRHDVKK---CILVGDP 1640
Query: 570 MQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLF 629
QL P S+ A + S +RL C G V K YR HP I PSK+F
Sbjct: 1641 QQLPPTTISKVATKFQYEISLFQRLMNC-----GMAPTVLKT--QYRMHPMISKFPSKIF 1693
Query: 630 YEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWF---NRIEVSKVV 686
Y EL K+ Y N ++ P++F+ + D+ S+F N EV
Sbjct: 1694 YRGELEDGKNVREYKQDYYNDSASRFGPLVFYDL--FDKHGEVRSSFFSLRNPTEVKLAK 1751
Query: 687 EIIQKLTST-GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVII 745
I+ +L S N + +IGVITPY+ Q + L A + Y +++V +++ FQG+E+ +I
Sbjct: 1752 LIVDQLISNYPNTKDLEIGVITPYKSQSVDLFNAFKG-YQ-NVEVSTIDGFQGKEKDFVI 1809
Query: 746 VSTVRSTIKHN 756
S+VR+ H+
Sbjct: 1810 FSSVRAHSGHS 1820
Score = 131 (51.2 bits), Expect = 7.8e-28, Sum P(3) = 7.8e-28
Identities = 43/151 (28%), Positives = 70/151 (46%)
Query: 337 NLYNVQFTYNRVNMRRLYQATDAAQE--LDTEFLFP-------SESSGIRLIESNTLVPI 387
N++N+Q + + R Y A + L T + P SS I +
Sbjct: 1309 NIWNIQKVTSLSTISREYMALHMVGKIPLGTSIISPHLYINSNDSSSSTFKIPDKLFQKL 1368
Query: 388 SCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYAT--------REDA 439
+LNE Q+ +I L G L+ GPPGTGKT T++ ++L ++ T D
Sbjct: 1369 RSSLNESQLSAIASTLKNLGGFS-LLQGPPGTGKTKTIL-SLLSVFTTVLTNIEKSHSDP 1426
Query: 440 RLLVCAPSNSAADHLLEKILGEKAVEVRENE 470
++LVCAPSN+A D + +I + ++ N+
Sbjct: 1427 KILVCAPSNAAVDEIALRIKKDGLIDKNGNK 1457
Score = 48 (22.0 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 201 RGQIYQNRLPRYDIPNHIRELIER-KQIPD-AITDGLTLKNYTSFFKTLLIMEEIQLKED 258
R +I + + + +I I++L ER KQ D + + +T NYT +++L +D
Sbjct: 1506 RLKIIKIKEKQVEIDKQIKDLAERLKQQEDNKLRNEITKLNYTREKYN----NDLKLAKD 1561
Query: 259 MRAYDMENVTLMRKGLYLSLVVPGLAERRPSLVNG---DFIF 297
E + ++ LY++++ G ++ S ++G D++F
Sbjct: 1562 EERRFHEQYSNTKRNLYINII--GRSQIILSTLSGSGYDYLF 1601
Score = 45 (20.9 bits), Expect = 7.8e-28, Sum P(3) = 7.8e-28
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 223 ERKQIPDAITDGLTLKNYTSFFKTLLIME 251
E K +P D LK+Y F+ LLI E
Sbjct: 1156 ELKPVPGTFDD---LKHYIDIFQPLLIEE 1181
Score = 41 (19.5 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 454 LLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFF 494
L+E L A+E+R+ F LN+ + ED++ + C F
Sbjct: 443 LMEHSLLYSAIELRKRLQFLLNSELK--EDIDRELSNPCDF 481
>CGD|CAL0006154 [details] [associations]
symbol:orf19.6199 species:5476 "Candida albicans" [GO:0043141
"ATP-dependent 5'-3' DNA helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0033203 "DNA helicase
A complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR004483 SMART:SM00382
CGD:CAL0006154 GO:GO:0005524 GO:GO:0003677 GO:GO:0017111
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000038
EMBL:AACQ01000037 TIGRFAMs:TIGR00376 RefSeq:XP_718706.1
RefSeq:XP_718790.1 ProteinModelPortal:Q5AAW1 STRING:Q5AAW1
GeneID:3639532 GeneID:3639630 KEGG:cal:CaO19.13579
KEGG:cal:CaO19.6199 Uniprot:Q5AAW1
Length = 719
Score = 257 (95.5 bits), Expect = 8.6e-28, Sum P(2) = 8.6e-28
Identities = 97/311 (31%), Positives = 155/311 (49%)
Query: 533 FSHIFLDEAGQASEPESMVPI--SSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKS- 589
F I +DE Q+ EP+ +P+ S+ K+ +V+AGD MQL P I ++++ + S
Sbjct: 405 FDTIIIDEVSQSLEPQCWIPLLLSNRFKR---LVIAGDNMQLPPTIKTQKSNSSSPSSSS 461
Query: 590 -----YLERLFE-CEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESIS 643
LF+ +CHG E Y L YR + I+ PS Y+ +L C D+S+
Sbjct: 462 SSASILATTLFDRLMKHCHG-EKYKKLLDVQYRMNKSIMQFPSMQLYDNQL-KC-DDSVR 518
Query: 644 CTAYLNFLPNKEF------PVLFFGIQGCDEREG-----SNPSWFNRIEVSKVVEIIQKL 692
+ ++ LP E +++ QG + E S +N +E+ V I+KL
Sbjct: 519 EISLVD-LPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKKL 577
Query: 693 TSTGNLSEEDIGVITPYRQQVLKLNKALE------SLYMPD----IKVGSVEQFQGQERQ 742
S+G + +DIGVI PY QV L K + S D I++ +V+ FQG+E++
Sbjct: 578 LSSG-VQPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEISTVDGFQGREKE 636
Query: 743 VIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQL 802
VII++ VRS ND R+ +GFLS RR NVA+TR L ++G+ ++++
Sbjct: 637 VIILTLVRS----ND-SRE--IGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQSGNKFLQ 689
Query: 803 LW--YCSDNNS 811
W + D N+
Sbjct: 690 SWSKFVEDGNN 700
Score = 140 (54.3 bits), Expect = 8.6e-28, Sum P(2) = 8.6e-28
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 391 LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSA 450
LN Q +I+ + + +I+GPPGTGKT TL+E I QL T + ++LVC PSN +
Sbjct: 222 LNASQRQAID--FAINDSNITIIHGPPGTGKTYTLIELIQQL--TSKGEKVLVCGPSNIS 277
Query: 451 ADHLLEKILGEKAVEVRENEIFRLNAPSR 479
D +LE+ LG+K ++ + R+ P+R
Sbjct: 278 VDTILER-LGDKYEPMK---LIRIGHPAR 302
>UNIPROTKB|Q5AAW1 [details] [associations]
symbol:HCS1 "Putative uncharacterized protein HCS1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR004483 SMART:SM00382 CGD:CAL0006154 GO:GO:0005524
GO:GO:0003677 GO:GO:0017111 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AACQ01000038 EMBL:AACQ01000037
TIGRFAMs:TIGR00376 RefSeq:XP_718706.1 RefSeq:XP_718790.1
ProteinModelPortal:Q5AAW1 STRING:Q5AAW1 GeneID:3639532
GeneID:3639630 KEGG:cal:CaO19.13579 KEGG:cal:CaO19.6199
Uniprot:Q5AAW1
Length = 719
Score = 257 (95.5 bits), Expect = 8.6e-28, Sum P(2) = 8.6e-28
Identities = 97/311 (31%), Positives = 155/311 (49%)
Query: 533 FSHIFLDEAGQASEPESMVPI--SSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKS- 589
F I +DE Q+ EP+ +P+ S+ K+ +V+AGD MQL P I ++++ + S
Sbjct: 405 FDTIIIDEVSQSLEPQCWIPLLLSNRFKR---LVIAGDNMQLPPTIKTQKSNSSSPSSSS 461
Query: 590 -----YLERLFE-CEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESIS 643
LF+ +CHG E Y L YR + I+ PS Y+ +L C D+S+
Sbjct: 462 SSASILATTLFDRLMKHCHG-EKYKKLLDVQYRMNKSIMQFPSMQLYDNQL-KC-DDSVR 518
Query: 644 CTAYLNFLPNKEF------PVLFFGIQGCDEREG-----SNPSWFNRIEVSKVVEIIQKL 692
+ ++ LP E +++ QG + E S +N +E+ V I+KL
Sbjct: 519 EISLVD-LPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKKL 577
Query: 693 TSTGNLSEEDIGVITPYRQQVLKLNKALE------SLYMPD----IKVGSVEQFQGQERQ 742
S+G + +DIGVI PY QV L K + S D I++ +V+ FQG+E++
Sbjct: 578 LSSG-VQPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEISTVDGFQGREKE 636
Query: 743 VIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQL 802
VII++ VRS ND R+ +GFLS RR NVA+TR L ++G+ ++++
Sbjct: 637 VIILTLVRS----ND-SRE--IGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQSGNKFLQ 689
Query: 803 LW--YCSDNNS 811
W + D N+
Sbjct: 690 SWSKFVEDGNN 700
Score = 140 (54.3 bits), Expect = 8.6e-28, Sum P(2) = 8.6e-28
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 391 LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSA 450
LN Q +I+ + + +I+GPPGTGKT TL+E I QL T + ++LVC PSN +
Sbjct: 222 LNASQRQAID--FAINDSNITIIHGPPGTGKTYTLIELIQQL--TSKGEKVLVCGPSNIS 277
Query: 451 ADHLLEKILGEKAVEVRENEIFRLNAPSR 479
D +LE+ LG+K ++ + R+ P+R
Sbjct: 278 VDTILER-LGDKYEPMK---LIRIGHPAR 302
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 364 (133.2 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 113/384 (29%), Positives = 186/384 (48%)
Query: 379 IESNTLVPISC--NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATR 436
+E +L+ C LN Q ++E L KG LI GPPGTGKT T+ + L A
Sbjct: 1580 MEIPSLLRSMCIQELNTSQFSAVETSLSTKGIT--LIQGPPGTGKTTTIYYLLSILLAIN 1637
Query: 437 EDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDE 496
++LVC PS+++ D + ++ L + V + ++++ D R FD
Sbjct: 1638 PKFKILVCGPSHASVDEVAKRCLKKSLVNIDGKPYLPNMVRIGKLQNISPDCHRISLFD- 1696
Query: 497 QIFKCPPLA-ALVCYRIIISTYMSASLIYAEGVDRGHFSH--IFLDEAGQASEPESMVPI 553
K P A++ II +SAS R +F + +DE+ Q+SEP S++P+
Sbjct: 1697 ---KTPAQRKAIIRNATIIFATLSAS---GSKPIRSNFKANIVLVDESTQSSEPASLIPL 1750
Query: 554 S-SYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLV 612
+K ++L GDP+QL P I+S E+ G+ S ERL + P V L
Sbjct: 1751 CIGNIEK---LILVGDPLQLPPTIFSSESAKNGLNISLFERLSKVLP--------VEMLN 1799
Query: 613 RNYRSHPQILHLPSKLFYEEELIACKDESISCTAYL--NFLPNKEF-PVLFFGIQGCDER 669
YR HP I PS FY++ L+ +++ Y NF + ++ P+ F+ + E
Sbjct: 1800 TQYRMHPTISRFPSNQFYKDRLL--DGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEE 1857
Query: 670 EGSNPSWFNRIEVSKVVEIIQKLTST-GNLSEEDIGVITPYRQQVLKLNKALESLYMP-D 727
G S N++E++ V +I+KL + G+ITPY+ Q ++ + + P +
Sbjct: 1858 SGKR-SLKNKLEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLN 1916
Query: 728 IKVGSVEQFQGQERQVIIVSTVRS 751
I+ +++ QG E+ +II+S VRS
Sbjct: 1917 IETSTIDGVQGSEKDIIILSCVRS 1940
Score = 304 (112.1 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 93/317 (29%), Positives = 154/317 (48%)
Query: 563 VVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQIL 622
++L GDP+QL P I+S E+ G+ S ERL + P V L YR HP I
Sbjct: 1758 LILVGDPLQLPPTIFSSESAKNGLNISLFERLSKVLP--------VEMLNTQYRMHPTIS 1809
Query: 623 HLPSKLFYEEELIACKDESISCTAYL--NFLPNKEF-PVLFFGIQGCDEREGSNPSWFNR 679
PS FY++ L+ +++ Y NF + ++ P+ F+ + E G S N+
Sbjct: 1810 RFPSNQFYKDRLL--DGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKR-SLKNK 1866
Query: 680 IEVSKVVEIIQKLTST-GNLSEEDIGVITPYRQQVLKLNKALESLYMP-DIKVGSVEQFQ 737
+E++ V +I+KL + G+ITPY+ Q ++ + + P +I+ +++ Q
Sbjct: 1867 LEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLNIETSTIDGVQ 1926
Query: 738 GQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDP 797
G E+ +II+S VRS +R +GFLS+ RR NVA+TRA L +IGN ++ KD
Sbjct: 1927 GSEKDIIILSCVRS-------ER---IGFLSDRRRINVALTRAKFGLFVIGNSKLLKKDR 1976
Query: 798 YWHQLLWYCSDNNSY-----QGCALPERE--EFADEDPTAAECWNHEEEIPQSFQEDNWN 850
W Y NS +G ++ E++ E+ +P ++ + E ED
Sbjct: 1977 TWGPFCQYVHSINSMVSIDSKGISVLEQQIQEYDSLNPNGLIEFHSDSEDDYDDSEDEEE 2036
Query: 851 QEPFQAENLKPVKDEDE 867
E E ++ ++DE
Sbjct: 2037 DEDEDNEEIQEHDEDDE 2053
Score = 47 (21.6 bits), Expect = 6.9e-27, Sum P(3) = 6.9e-27
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 85 ASTPENTFTLSVMKPPSPGSDSGTNRGFVEFFTLEERMIQ 124
A +P T +S++ PSP S++ T F +L+ +++
Sbjct: 1089 APSPTTTSQISIV--PSPSSNNNTTTTFENDHSLKHSLLK 1126
Score = 41 (19.5 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 61 ETAVD--SITIKNTTREPVELWSKIYASTPENTFTLSVMKPP 100
E +D SI I N E VEL K + E T + + K P
Sbjct: 982 EAFIDQKSIDILNYIPEQVELNIKSKSKKTEYTMNVELFKLP 1023
Score = 39 (18.8 bits), Expect = 6.9e-27, Sum P(3) = 6.9e-27
Identities = 19/67 (28%), Positives = 27/67 (40%)
Query: 26 DYKSECSYNPSEEDPVQISFPFPFIDGKPQSVSVGETAVDSITIKNT-TREPVELWSKIY 84
D + + +P+E PV + P P I P S S T + T +T T P +
Sbjct: 760 DSTTTTTASPTEIKPVPVPVPPPTIT-TPTSTST-PTPTSTPTPTSTPTPTPTSTPTPTP 817
Query: 85 ASTPENT 91
TP T
Sbjct: 818 IPTPTPT 824
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 263 (97.6 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 91/291 (31%), Positives = 142/291 (48%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLE 592
F + +DEA QA EP+ +P+ K V+LAGD MQL P + S+ S E
Sbjct: 383 FDAVIIDEASQALEPQCWIPLLGMNK----VILAGDHMQLSPNVQSKRPYI-----SMFE 433
Query: 593 RLFECEPYCHGNENYVTKLVRN--YRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF 650
RL + + G+ + K N YR H I PS FY+ +L+ ++ L
Sbjct: 434 RLVKSQ----GD---LVKCFLNIQYRMHELISKFPSDTFYDSKLVPAEEVKKRLLMDLEN 486
Query: 651 LPNKEF---PVLFFGIQGC---DEREGSNPSWF-----NRIEVSKVVEIIQKLTSTGNLS 699
+ E P+ F+ G D+R +++ N E V I L G L
Sbjct: 487 VEETELTDSPIYFYDTLGNYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLEAG-LE 545
Query: 700 EEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFD 759
+DI V+TPY QV + + L+ + ++++GSV++ QG+E++ II S VRS ND
Sbjct: 546 AKDIAVVTPYNAQVALIRQLLKEKGI-EVEMGSVDKVQGREKEAIIFSLVRS----NDV- 599
Query: 760 RKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVS-KDPYWHQLLWYCSDN 809
R+ +GFL+ RR NVA+TR L +IG+ + V ++HQ + + +N
Sbjct: 600 RE--VGFLAEKRRLNVAITRPKRHLCVIGDSNTVKWASEFFHQWVDFLEEN 648
Score = 126 (49.4 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 35/88 (39%), Positives = 49/88 (55%)
Query: 391 LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSA 450
LN Q +++ + +K LI+GPPGTGKT TLVE I QL + R+LVC SN A
Sbjct: 210 LNASQKKAVKFSIAVKELS--LIHGPPGTGKTHTLVEIIQQLVLRNK--RILVCGASNLA 265
Query: 451 ADHLLEKILGEKAVEVRENEIFRLNAPS 478
D++++++ VR RL PS
Sbjct: 266 VDNIVDRLSSSGIPMVRLGHPARL-LPS 292
Score = 46 (21.3 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 7 DDNWGNEWEKRDIGFIDFEDYKSE 30
D++W ++ R+I F+D E KSE
Sbjct: 11 DEDWIQKFGDREIEFVD-EAQKSE 33
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 313 (115.2 bits), Expect = 3.6e-27, Sum P(3) = 3.6e-27
Identities = 93/304 (30%), Positives = 153/304 (50%)
Query: 512 IIISTYMSASLIYAEGVDRGH----FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAG 567
II T ++ + E RG FS + +DEAGQ+ E E++ P+ C K +VL G
Sbjct: 2144 IICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNK---LVLVG 2200
Query: 568 DPMQLGPVIYSREAETYGMGKSYLERLFEC--EPYCHG--NENYVTKLVRNYRSHPQILH 623
DP QL P + S +A+ YG +S + R ++ E H + +L YR HP I
Sbjct: 2201 DPKQLPPTVISMKAQDYGYDQSMMARFYKLLEENVEHNVIGRLPILQLTVQYRMHPDICL 2260
Query: 624 LPSKLFYEEELIACK-DESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEV 682
PS Y L E+ C++ F P F V G G + R+ N S+ N E+
Sbjct: 2261 FPSNYIYNRNLKTNSLTEASRCSSDWPFQPYLVFDV---G-DGSERRD--NDSYVNVQEI 2314
Query: 683 SKVVEIIQKLTSTG-NLSEEDIGVITPYRQQVLKLNKALESLY--MPDIKVGSVEQFQGQ 739
V+EII+ + +++ +IG+IT Y+ Q + K L+ + +V +V+ FQG+
Sbjct: 2315 KLVMEIIKLIKDKRRDVTFRNIGIITHYKAQKTLIQKDLDKEFDRKGPAEVDTVDGFQGR 2374
Query: 740 ERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYW 799
++ +IV+ VR+ +GFL++ +R NV +TRA L I+G+ + ++ +W
Sbjct: 2375 QKDCVIVTCVRAKTSQGS------IGFLASLQRLNVTITRAKYSLFILGHLRTLRENDHW 2428
Query: 800 HQLL 803
+QL+
Sbjct: 2429 NQLI 2432
Score = 105 (42.0 bits), Expect = 3.6e-27, Sum P(3) = 3.6e-27
Identities = 36/107 (33%), Positives = 55/107 (51%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATRE---------DA-----RLLVCAPSNSAADHLLEK 457
LI+GPPGTGK+ T+V + +L + +A R+LVCAPSN+A D L++K
Sbjct: 1954 LIHGPPGTGKSKTIVGLLYRLLTENQRRGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2013
Query: 458 IL---GEKAVEVRE--NEIFRLNAPSR-PYEDVNADHIRFCFFDEQI 498
I+ EK + R +N P + +N + +RF D Q+
Sbjct: 2014 IILEFKEKCKDKRNPLGNCGDINLVRLGPEKSINNEVLRFSL-DSQV 2059
Score = 46 (21.3 bits), Expect = 4.4e-21, Sum P(3) = 4.4e-21
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 207 NRLPRYDIPNHIRELIERKQIPDAITDGLT 236
N + D+P++++E+ RK+ D D L+
Sbjct: 2060 NHRMKKDLPSYVQEMHRRKEFLDHQLDELS 2089
Score = 41 (19.5 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 319 DEVHLKFASDFQLNHR 334
+EV L+F+ D Q+NHR
Sbjct: 2048 NEV-LRFSLDSQVNHR 2062
Score = 40 (19.1 bits), Expect = 1.8e-20, Sum P(3) = 1.8e-20
Identities = 9/39 (23%), Positives = 20/39 (51%)
Query: 432 LYATREDARLL-VCAPSNSAADHLLEKILGEKAVEVREN 469
++ T+ D + +C+ L+E + G+ V+V E+
Sbjct: 1490 IFLTQRDPEDMDLCSQMEEGNAQLIEVVHGKDTVQVEED 1528
Score = 38 (18.4 bits), Expect = 3.6e-27, Sum P(3) = 3.6e-27
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 22 IDFEDYKSECSYNPSEEDPVQIS 44
ID + K + NP EDPV+ S
Sbjct: 1156 IDVKKPKRKRYENPVAEDPVRPS 1178
>GENEDB_PFALCIPARUM|MAL7P1.12 [details] [associations]
symbol:MAL7P1.12 "erythrocyte
membrane-associated antigen" species:5833 "Plasmodium falciparum"
[GO:0016020 "membrane" evidence=ISS] GO:GO:0016020
InterPro:IPR014001 SMART:SM00487 EMBL:AL844506
RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35 IntAct:Q8IC35
MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA GeneID:2655186
KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 364 (133.2 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 145/530 (27%), Positives = 233/530 (43%)
Query: 300 HAYEDTSS--AYQGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRVNMRRLYQAT 357
H+Y S A G ++ A+ +K DFQ N +N N +
Sbjct: 1685 HSYNKYSKYIAQNGKLNEEIANYEKIKM--DFQNNESLKNNTMSDDILNDYSKEAKNPYE 1742
Query: 358 DAAQELDTEFLFPSESSGIR--LIESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYG 415
D E + + S+ I LIES L P + LN+ Q + L + L+ G
Sbjct: 1743 DLLNESINKQIGNSQVEDIDKYLIESINL-PTNLPLNDSQKLACLSALTRRLT---LVQG 1798
Query: 416 PPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVR----ENEI 471
PPGTGKT I + + ++L A SN AA++L+E + VR +
Sbjct: 1799 PPGTGKTHVACAIIDSWHKQNSNKKILAVADSNVAANNLVEGLKKRNIQAVRVGAGSDSD 1858
Query: 472 FRLNA--PSRPYEDVNADHIRFCFFDEQIFKCPP-LAALVCYRIIISTYMSASLIYAEGV 528
F A Y+D+ + ++ K L A+ Y ++I+T + + E
Sbjct: 1859 FHEEAIMEFHRYKDLLKLRKNNMQKEAKVMKALLFLEAVKKYNVVIATCVGSG---HEIF 1915
Query: 529 DRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGK 588
D F + +DE Q+ EP +++P+ YC +VL GD QL P I S +A G+ K
Sbjct: 1916 DNEKFERVIIDECAQSIEPSNLIPLGHYCNN---LVLIGDHKQLPPTIISPDAIKLGLDK 1972
Query: 589 SYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYL 648
S LER + V L R H I P+ FY+ +L +
Sbjct: 1973 SLLER------FVMAKIAPVHLLNTQRRMHLSICVFPNFHFYDNKLKTANVTEENRPIIK 2026
Query: 649 NFL-PNKEFPVLFFGIQ----GCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDI 703
FL PN + + F + G S FN E+ ++ +++ + + G +S ++I
Sbjct: 2027 GFLWPNPKCRLAFIDVSIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIINEGCVSVDEI 2086
Query: 704 GVITPYRQQVLKLNKALESLYMPD----IKVGSVEQFQGQERQVIIVSTVRSTIKHNDFD 759
G++T Y Q +KL KA++ + + I++ S++ FQG+E+ +I+ S VRS +N+
Sbjct: 2087 GILTAYDAQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNA-NNE-- 2143
Query: 760 RKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPY-WHQLL-WYCS 807
LGFL + RR NV +TRA +I+ G+ ++ DP W L W S
Sbjct: 2144 ----LGFLRDARRLNVMLTRAKRGVILFGDQFTLANDPANWLPWLKWISS 2189
Score = 37 (18.1 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 69 IKNTTREPVELWSKIYASTPENTFTLSVMKPPSPGSDSGTNRGFVE 114
I NT L++K +S +N +++ + G N+ F E
Sbjct: 980 INNTGSNNNTLYNKYMSSNSKNFDDGNMLNQNKFNKNQGANKNFNE 1025
>UNIPROTKB|Q8IC35 [details] [associations]
symbol:MAL7P1.12 "Erythrocyte membrane-associated antigen"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016020 InterPro:IPR014001 SMART:SM00487
EMBL:AL844506 RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35
IntAct:Q8IC35 MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA
GeneID:2655186 KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 364 (133.2 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 145/530 (27%), Positives = 233/530 (43%)
Query: 300 HAYEDTSS--AYQGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRVNMRRLYQAT 357
H+Y S A G ++ A+ +K DFQ N +N N +
Sbjct: 1685 HSYNKYSKYIAQNGKLNEEIANYEKIKM--DFQNNESLKNNTMSDDILNDYSKEAKNPYE 1742
Query: 358 DAAQELDTEFLFPSESSGIR--LIESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYG 415
D E + + S+ I LIES L P + LN+ Q + L + L+ G
Sbjct: 1743 DLLNESINKQIGNSQVEDIDKYLIESINL-PTNLPLNDSQKLACLSALTRRLT---LVQG 1798
Query: 416 PPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVR----ENEI 471
PPGTGKT I + + ++L A SN AA++L+E + VR +
Sbjct: 1799 PPGTGKTHVACAIIDSWHKQNSNKKILAVADSNVAANNLVEGLKKRNIQAVRVGAGSDSD 1858
Query: 472 FRLNA--PSRPYEDVNADHIRFCFFDEQIFKCPP-LAALVCYRIIISTYMSASLIYAEGV 528
F A Y+D+ + ++ K L A+ Y ++I+T + + E
Sbjct: 1859 FHEEAIMEFHRYKDLLKLRKNNMQKEAKVMKALLFLEAVKKYNVVIATCVGSG---HEIF 1915
Query: 529 DRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGK 588
D F + +DE Q+ EP +++P+ YC +VL GD QL P I S +A G+ K
Sbjct: 1916 DNEKFERVIIDECAQSIEPSNLIPLGHYCNN---LVLIGDHKQLPPTIISPDAIKLGLDK 1972
Query: 589 SYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYL 648
S LER + V L R H I P+ FY+ +L +
Sbjct: 1973 SLLER------FVMAKIAPVHLLNTQRRMHLSICVFPNFHFYDNKLKTANVTEENRPIIK 2026
Query: 649 NFL-PNKEFPVLFFGIQ----GCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDI 703
FL PN + + F + G S FN E+ ++ +++ + + G +S ++I
Sbjct: 2027 GFLWPNPKCRLAFIDVSIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIINEGCVSVDEI 2086
Query: 704 GVITPYRQQVLKLNKALESLYMPD----IKVGSVEQFQGQERQVIIVSTVRSTIKHNDFD 759
G++T Y Q +KL KA++ + + I++ S++ FQG+E+ +I+ S VRS +N+
Sbjct: 2087 GILTAYDAQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNA-NNE-- 2143
Query: 760 RKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPY-WHQLL-WYCS 807
LGFL + RR NV +TRA +I+ G+ ++ DP W L W S
Sbjct: 2144 ----LGFLRDARRLNVMLTRAKRGVILFGDQFTLANDPANWLPWLKWISS 2189
Score = 37 (18.1 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 69 IKNTTREPVELWSKIYASTPENTFTLSVMKPPSPGSDSGTNRGFVE 114
I NT L++K +S +N +++ + G N+ F E
Sbjct: 980 INNTGSNNNTLYNKYMSSNSKNFDDGNMLNQNKFNKNQGANKNFNE 1025
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 301 (111.0 bits), Expect = 5.2e-27, Sum P(3) = 5.2e-27
Identities = 92/304 (30%), Positives = 153/304 (50%)
Query: 512 IIISTYMSASLIYAEGVDRGH----FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAG 567
II T ++ + E RG FS + +DEAGQ+ E E++ P+ C K +VL G
Sbjct: 2140 IICCTLSTSGGLLLEAAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNK---LVLVG 2196
Query: 568 DPMQLGPVIYSREAETYGMGKSYLERLFEC--EPYCHG--NENYVTKLVRNYRSHPQILH 623
DP QL P + S +A+ YG +S + R + E H V +L YR HP I
Sbjct: 2197 DPKQLPPTVISVKAQDYGYDQSMMARFHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICL 2256
Query: 624 LPSKLFYEEELIACKD-ESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEV 682
PS Y+ L + E+ C++ F P F V G G + R+ N S+ N E+
Sbjct: 2257 FPSSYIYDGILRTNRGTETSRCSSDWPFQPYLVFDV---G-DGLERRD--NDSYVNVQEI 2310
Query: 683 SKVVEIIQKLTSTG-NLSEEDIGVITPYRQQVLKLNKALESLY--MPDIKVGSVEQFQGQ 739
V+E+I+ + +++ +IG+IT Y+ Q + K L+ + +V +V+ FQG+
Sbjct: 2311 KLVMELIKLIKDKRRDVTFRNIGIITHYKAQKTMIQKDLDKEFDRKGAAEVDTVDAFQGR 2370
Query: 740 ERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYW 799
++ +IV+ VR+ +GFL++ +R NV +TRA L I+G+ + ++ +W
Sbjct: 2371 QKDCVIVTCVRANATQGS------IGFLASLQRLNVTITRAKYSLFILGHLRTLVENRHW 2424
Query: 800 HQLL 803
+ L+
Sbjct: 2425 YHLI 2428
Score = 104 (41.7 bits), Expect = 5.2e-27, Sum P(3) = 5.2e-27
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 412 LIYGPPGTGKTMTLVEAILQL--------YATR------EDARLLVCAPSNSAADHLLEK 457
LI+GPPGTGK+ T+V + +L Y+ + R+LVCAPSN+A D L++K
Sbjct: 1950 LIHGPPGTGKSKTIVGILYRLLTENQRRGYSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2009
Query: 458 ILGE 461
I+ E
Sbjct: 2010 IILE 2013
Score = 81 (33.6 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 39/150 (26%), Positives = 63/150 (42%)
Query: 303 EDTSSAYQGFIHRVEADEV-HL-KFASDFQLNHRDENLYNVQ-----FTYNR-VNMRRLY 354
ED Y G++H+ V H KF + +D N+ F + V +R
Sbjct: 1821 EDACEYYCGYVHKFRRTSVMHNGKFECSVSIQTQDNLPVNLNELVKCFVISSLVTTQRKL 1880
Query: 355 QATD---AAQELDTEFLFPSE----SSGIRLIESNTLVPISCNLNEEQMCSIEKILGL-K 406
+A +L L P+ + + S +V + NE+Q +IE + K
Sbjct: 1881 KAMSLLSGRNQLARAILNPNPMDFCTKDLPTATSERIVAYLKDFNEDQKKAIETACAMVK 1940
Query: 407 GAPPY----LIYGPPGTGKTMTLVEAILQL 432
+P LI+GPPGTGK+ T+V + +L
Sbjct: 1941 HSPSVAKICLIHGPPGTGKSKTIVGILYRL 1970
Score = 53 (23.7 bits), Expect = 9.4e-22, Sum P(3) = 9.4e-22
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 207 NRLPRYDIPNHIRELIERKQIPDAITDGLT 236
N + D+P+H++E+ +RK+ D D L+
Sbjct: 2056 NHRMKKDLPSHVQEMHKRKEFLDHQLDELS 2085
Score = 50 (22.7 bits), Expect = 5.2e-27, Sum P(3) = 5.2e-27
Identities = 31/145 (21%), Positives = 58/145 (40%)
Query: 35 PSEEDPVQISFPF----PFIDGKPQSVSVGETAVDSITIKNTTREPVELWSKIYASTPEN 90
P+ + + PF PF+ P ++ ++ +K + E++ P +
Sbjct: 1654 PNNSNRQVLRVPFGESRPFLTSSPVNILTSSQSISDTFVKEVLKWRYEMFVNFDQCGPPS 1713
Query: 91 TFTLSV-MKPPSPGSDSGTNRGFVEFFTLEERMIQPGQTLTI-WLSC--KPKGIGLHTTV 146
+ S+ + P D G F FF L ++ +T+ W+S K K LH
Sbjct: 1714 SLCQSIERRVPIRFQDCGDY--FNVFFPL--MVLNTFETVAQEWISSPNKEKFHQLHLRK 1769
Query: 147 LQFDVEDRIERVVFLLAEDKISQSL 171
D + E VV+L E ++++ L
Sbjct: 1770 FPGDYKKYWEFVVYL-EECELAKQL 1793
Score = 44 (20.5 bits), Expect = 8.0e-21, Sum P(3) = 8.0e-21
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 319 DEVHLKFASDFQLNHR 334
+EV LKF+ D Q+NHR
Sbjct: 2044 NEV-LKFSLDSQVNHR 2058
Score = 43 (20.2 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 245 KTLLIMEEIQLKEDMRAYDMEN 266
K LL +++QL+ MR+ +N
Sbjct: 1346 KKLLTSQDLQLQRQMRSKSQQN 1367
Score = 38 (18.4 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 151 VEDRIERVVFLLAEDKISQSLASKRPYSRGGRKKQ 185
V++ +R FL D L+ +R RGGR+ Q
Sbjct: 2067 VQEMHKRKEFL---DHQLDELSRQRALCRGGRESQ 2098
Score = 37 (18.1 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 432 LYATREDARLL-VCAPSNSAADHLLEKILGEKAVEVRE 468
++ T+ D + +C+ D L+E I G+ V+ E
Sbjct: 1485 IFLTQRDPEDMDLCSQIERENDKLIEVIHGKDTVQGEE 1522
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 308 (113.5 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 91/304 (29%), Positives = 153/304 (50%)
Query: 512 IIISTYMSASLIYAEGVDRGH----FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAG 567
+I T ++ + E RG FS + +DEAGQ+ E E++ P+ C K ++L G
Sbjct: 2173 VICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNK---LILVG 2229
Query: 568 DPMQLGPVIYSREAETYGMGKSYLERLFEC-EPYCHGN---ENYVTKLVRNYRSHPQILH 623
DP QL P + S +A+ YG +S + R ++ E N V +L YR HP I
Sbjct: 2230 DPKQLPPTVISMKAQEYGYDQSMMARFYKLLEDNVEHNMIGRLPVLQLTVQYRMHPDICL 2289
Query: 624 LPSKLFYEEELIACKD-ESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEV 682
PS Y L + E+ C++ F P F V G G + R+ N S+ N E+
Sbjct: 2290 FPSNYVYNRSLKTNRQTETNRCSSDWPFQPYLVFDV---G-DGSERRD--NDSYVNVQEI 2343
Query: 683 SKVVEIIQKLTSTG-NLSEEDIGVITPYRQQVLKLNKALESLY--MPDIKVGSVEQFQGQ 739
V+EII+ + +++ +IG+IT Y+ Q + K L+ + +V +V+ FQG+
Sbjct: 2344 KLVMEIIKLIKDKRRDVTFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDGFQGR 2403
Query: 740 ERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYW 799
++ +IV+ VR+ +GFL++ +R NV +TRA L I+G+ + ++ +W
Sbjct: 2404 QKDCVIVTCVRANAMQGS------IGFLASLQRLNVTITRAKYSLFILGHLRTLMENQHW 2457
Query: 800 HQLL 803
+ L+
Sbjct: 2458 NHLI 2461
Score = 103 (41.3 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATRE---------DA-----RLLVCAPSNSAADHLLEK 457
LI+GPPGTGK+ T+V + +L + +A R+LVCAPSN+A D L++K
Sbjct: 1983 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2042
Query: 458 ILGE 461
I+ E
Sbjct: 2043 IILE 2046
Score = 53 (23.7 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 207 NRLPRYDIPNHIRELIERKQIPDAITDGLT 236
N + D+P+H++E+ RK+ D D L+
Sbjct: 2089 NHRMKKDLPSHVQEMHRRKEFLDRQLDELS 2118
Score = 44 (20.5 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 319 DEVHLKFASDFQLNHR 334
+EV LKF+ D Q+NHR
Sbjct: 2077 NEV-LKFSLDSQVNHR 2091
Score = 39 (18.8 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 25/79 (31%), Positives = 32/79 (40%)
Query: 3 DTVGDDNWGNEWEK--RDIGFIDF-EDYKSECSYNPSEEDPVQISFPFPFIDGKPQSVSV 59
D D N E EK R D D+ E Y SEE +++ +PQS SV
Sbjct: 1110 DQEPDKNSVQEGEKNSRSTDIADLMNDWGYETDY-VSEEVIKKVAEGIEK-HTEPQSSSV 1167
Query: 60 GETAVDSITIKNTTREPVE 78
GE I +K R+ E
Sbjct: 1168 GEFC--KIEVKKRKRKRFE 1184
Score = 37 (18.1 bits), Expect = 8.4e-20, Sum P(3) = 8.4e-20
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 151 VEDRIERVVFLLAEDKISQSLASKRPYSRGGRKKQ 185
V++ R FL D+ L+ +R RGGR+ Q
Sbjct: 2100 VQEMHRRKEFL---DRQLDELSRQRALCRGGREIQ 2131
>POMBASE|SPBC29A10.10c [details] [associations]
symbol:SPBC29A10.10c "tRNA-splicing endonuclease
positive effector (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0035649 "Nrd1 complex" evidence=ISO] [GO:0043144 "snoRNA
processing" evidence=ISO] InterPro:IPR024714 PomBase:SPBC29A10.10c
GO:GO:0005524 GO:GO:0005634 EMBL:CU329671 GO:GO:0008033
eggNOG:COG1112 GO:GO:0006364 GO:GO:0004004 GO:GO:0006369
GO:GO:0043144 GO:GO:0016180 KO:K10706 GO:GO:0035649
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
OrthoDB:EOG4MPMZ6 PIR:T40065 RefSeq:NP_596055.1
ProteinModelPortal:O94387 EnsemblFungi:SPBC29A10.10c.1
GeneID:2540523 KEGG:spo:SPBC29A10.10c NextBio:20801650
Uniprot:O94387
Length = 1944
Score = 306 (112.8 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 87/278 (31%), Positives = 145/278 (52%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLE 592
F + +DEA QA E S++P+ C+ V+ GDP QL P + S+ + +G +S
Sbjct: 1510 FRTVIIDEAAQAVELSSIIPLKYGCES---CVMVGDPNQLPPTVLSKTSAKFGYSQSLYV 1566
Query: 593 RLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLP 652
R+F+ H NE+ ++ YR +P+I PSK FY +L+ ++S +
Sbjct: 1567 RMFKQ----H-NESACLLSIQ-YRMNPEISRFPSKFFYNSKLL--DGPNMSAVTSRPWHE 1618
Query: 653 NKEFPVL-FFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTG-NLS-EEDIGVITPY 709
+ + + FF + G + S S +N E S ++ + ++L N+ E IGV+TPY
Sbjct: 1619 DPQLGIYRFFNVHGTEAFSNSK-SLYNVEEASFILLLYERLIQCYLNIDFEGKIGVVTPY 1677
Query: 710 RQQVLKLNKALE----SLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLG 765
R QV +L + S+ + + +V+ FQGQE+ +II S VRS++ +G
Sbjct: 1678 RSQVQQLRSQFQRKYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMSGG-------IG 1730
Query: 766 FLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLL 803
FL + RR NVA+TRA S L I+GN + ++ ++ L+
Sbjct: 1731 FLQDLRRLNVALTRAKSSLYIVGNSKPLMQEDIFYSLI 1768
Score = 94 (38.1 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 38/139 (27%), Positives = 63/139 (45%)
Query: 347 RVNMRRLYQATDAAQELDTEFLFPSESSGIRLIESNTLVPISCNLNEEQMCSIEKILGLK 406
R ++L+ AT + +E R++++N + + N +++ I K G+
Sbjct: 1214 RFTAQKLFNATTSLREFAALKSLRHLPLSQRILDAN-VTRLPSNFTDDKKQKIMKSYGVN 1272
Query: 407 GAPPYLIY------------GPPGTGKTMTLVEAI----------LQLYA---TREDAR- 440
Y IY GPPGTGKT T++ I LQ TR+ ++
Sbjct: 1273 EPQAYAIYASSVNDGFTLIQGPPGTGKTKTILGMIGAVLTSSSQGLQFNVPGQTRKTSKN 1332
Query: 441 -LLVCAPSNSAADHLLEKI 458
+L+CAPSN+A D +L +I
Sbjct: 1333 KILICAPSNAAIDEILLRI 1351
Score = 44 (20.5 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 7/23 (30%), Positives = 16/23 (69%)
Query: 15 EKRDIGFIDFEDYKSECSYNPSE 37
++R I F+DF+ K++ +P++
Sbjct: 1017 QRRQIQFLDFDSLKTKNVVHPTQ 1039
Score = 44 (20.5 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 241 TSFFKTLLIMEEIQL-KEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIFAK 299
TS KT+ I++E++L + + Y M+ + G ++ LA+ L + F+
Sbjct: 354 TSLLKTISIIDEVELINKILINYTMQYKKELEVGFKNVQLLQSLADIFSVLFSEYFMIFP 413
Query: 300 HAYEDTSSAYQGF-IHRVEADEVHLKFASDFQLNHRDENLYNVQF 343
H+ D S + F +H A +KF F+L + EN +V++
Sbjct: 414 HS--DQSLQNKVFELHSTLA----IKFDELFRLLNL-ENEESVEW 451
Score = 39 (18.8 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 436 REDARLLVCAPSNSAADHLLEKI 458
RE A++ P SA +HL EK+
Sbjct: 925 RESAKV----PRTSAGNHLSEKL 943
>TAIR|locus:2059088 [details] [associations]
symbol:AT2G19120 "AT2G19120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0004386 GO:GO:0004519
eggNOG:COG1112 EMBL:AC002392 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI00542366 PIR:T00533
RefSeq:NP_179502.1 UniGene:At.52824 ProteinModelPortal:O64476
SMR:O64476 PaxDb:O64476 PRIDE:O64476 EnsemblPlants:AT2G19120.1
GeneID:816429 KEGG:ath:AT2G19120 TAIR:At2g19120
HOGENOM:HOG000084788 InParanoid:O64476 OMA:DWAALIS PhylomeDB:O64476
ProtClustDB:CLSN2683158 ArrayExpress:O64476 Genevestigator:O64476
Uniprot:O64476
Length = 1090
Score = 294 (108.6 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 102/302 (33%), Positives = 146/302 (48%)
Query: 512 IIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQ 571
I+ +T S+ + G F + +DEA QASE + P++ + VL GDP Q
Sbjct: 755 IVFTTVSSSGRKLFSRLTHG-FDMVVIDEAAQASEVGVLPPLALGAAR---CVLVGDPQQ 810
Query: 572 LGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYE 631
L + S+ A T +S ER F+ C L YR HPQI PS+ FY+
Sbjct: 811 LPATVISKAAGTLLYSRSLFER-FQLAG-CP-----TLLLTVQYRMHPQIRDFPSRYFYQ 863
Query: 632 EELIACKD-ESISCTAYLNFLPNKEF-PVLFFGIQ-GCDEREGSNPSWFNRIEVSKVVEI 688
L KD ESIS + + P LFF I G + G + S+ N E V +
Sbjct: 864 GRL---KDSESISSAPDEIYYKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCVGV 920
Query: 689 ---IQKLTSTGNLSEEDIGVITPYRQQV--LK--LNKALESLYMPDIKVGSVEQFQGQER 741
+QK + + +GVITPY+ Q+ LK AL + +I + +V+ FQGQER
Sbjct: 921 YMHLQKTLKSLGAGKVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQGQER 980
Query: 742 QVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQ 801
VII+S VR++ H +GF+S+ RR NVA+TRA L ++GN + K W
Sbjct: 981 DVIIMSCVRAS--------GHGVGFVSDIRRMNVALTRARRALWVMGNASALMKSEDWAA 1032
Query: 802 LL 803
L+
Sbjct: 1033 LI 1034
Score = 76 (31.8 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 440 RLLVCAPSNSAADHLLEKILGEKAVEVRENEIFR 473
R+LVCAPSN+A D LL ++L ++ E ++R
Sbjct: 580 RMLVCAPSNAATDELLSRVLDRGFID-GEMRVYR 612
Score = 61 (26.5 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 404 GLKGAPPY---LIYGPPGTGKTMTL 425
G+K P+ L+ GPPGTGKT T+
Sbjct: 488 GVKKQEPWPFTLVQGPPGTGKTHTV 512
Score = 38 (18.4 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 103 GSDSGTNRGFVEFFTLEERMIQPGQTLTIW 132
G+ SG + FTL + G+T T+W
Sbjct: 484 GTSSGVKKQEPWPFTLVQGPPGTGKTHTVW 513
>UNIPROTKB|F1RMM8 [details] [associations]
symbol:LOC100519780 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
OMA:FRAAHIM PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:FP102633 Ensembl:ENSSSCT00000003670 Uniprot:F1RMM8
Length = 2879
Score = 336 (123.3 bits), Expect = 5.6e-26, P = 5.6e-26
Identities = 132/477 (27%), Positives = 213/477 (44%)
Query: 331 LNHRDENLYNVQFTYNRVNMRRLYQATDAAQELDTEFLFPSESSGIRLIESNTLVPISCN 390
L + VQF + + R +QA DA E E+L S L + ++P
Sbjct: 703 LQPETRRILEVQFQLDPLAFPRWHQAVDALPE---EWLVLPNLSACALPCPSPILPAPQG 759
Query: 391 LNEEQMCSIEKILGL-----KGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCA 445
N Q + + G + P L+ GP GTGKT L A L++ + ++L+C
Sbjct: 760 -NSRQKLVMAIVAGTSPGDTRPVAPLLVCGPFGTGKTYALAMASLEVIR-QPGTKVLICT 817
Query: 446 PSNSAADHLLEKILGEKAVEVRENEI-FRLNAPSRPYEDVNADHIRFCFF--DEQIFKCP 502
+NS AD + + I R+ P+ P +A +R+C D Q F+ P
Sbjct: 818 HTNSTADSYIAEYFHPYTSRGHPEAIPLRVMDPTCPPRQTDAVTLRYCCLTEDRQAFRPP 877
Query: 503 PLAALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTV 562
A L +R++++ SA+ V G FSHIF+DEA Q E E++ P+ Y T
Sbjct: 878 TRAELEQHRVVVA---SATQARGLRVPAGFFSHIFIDEAAQMLEWEALTPLR-YATPGTR 933
Query: 563 VVLAGDPMQLGPVIYSREAETYGMGKSYLERL---FECEPYCHGNENYVTKLVRNYRSHP 619
VVLAGD M++ P ++S A G + L RL F + + V L +NYRS
Sbjct: 934 VVLAGDHMRVAPRLFSAAAGRIA-GPTLLHRLLQHFREQAPAVAQRSCVI-LCKNYRSTE 991
Query: 620 QILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNR 679
I+ S+ F + + P++ +P+LF G E++ S SW N
Sbjct: 992 AIVRFVSRHFS-----MASGSRPHASGKIPPHPHR-YPLLFCHAAGVPEQDVSMTSWLNA 1045
Query: 680 IEVSKVVEIIQKLTST-----GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVE 734
EV +VVE +Q++ +T G ++DI V++ QV L + L + + V S E
Sbjct: 1046 AEVVQVVEKVQEVYNTWPHCWGLREQKDICVVS-CGAQVSALRQELRKRDLGQVSVCSFE 1104
Query: 735 QFQGQERQVIIVSTVRSTIKHNDF--DRKHCLGFLSNPRRFNVAVTRAISLLIIIGN 789
G+ +V+++STV + H R F ++ + +T A S ++ +G+
Sbjct: 1105 ILPGRAFRVVVLSTVHN---HRSLLSQRAPAPEFFTDACVLHTVMTHAQSQVVAVGD 1158
Score = 314 (115.6 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
Identities = 96/316 (30%), Positives = 164/316 (51%)
Query: 510 YRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDP 569
+R+++ T A+ V+ I +DEAG ASEPE+++P+ S+ + + VV+L GD
Sbjct: 2566 HRVLLCTCSCAASASLRDVN---IRQILVDEAGLASEPETLIPLVSFSQVEKVVLL-GDH 2621
Query: 570 MQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLF 629
QL PV+ S + + G+ +S L+R Y + L Y H I PS F
Sbjct: 2622 KQLRPVVKSEQLQNLGLDRSLLQR------Y----RRDASMLDLQYCVHESICAFPSMEF 2671
Query: 630 YEEELIACKDESISCTAYLNFLPNKEFPVLFFG-IQGCDE------REGSNPSWFNRIEV 682
Y+++L + + + L + KE + FG +Q +E EG S N+ +
Sbjct: 2672 YKKKLKTWQGLRLP-PSILGY--GKENCSVIFGDVQSPEESLVVSTEEGRENSKVNKEQA 2728
Query: 683 SKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQ 742
+ VV + ++L S G + +D+ ++TPY QVL+++K LE + + V S+ + QG++ +
Sbjct: 2729 ALVVCLAKQLVS-GRVDPKDMAILTPYHAQVLEISKRLEEARVAGVTVCSITKSQGRQWR 2787
Query: 743 VIIVSTVRSTIKHNDFDRK-------HCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSK 795
++VSTVR T + +D D + LGFL +P + NVA+TRA L ++G+ ++
Sbjct: 2788 YVLVSTVR-TCQESDLDLRPTKSWLQKSLGFLVDPNQVNVALTRAQEGLWVVGDRLLLRC 2846
Query: 796 DPYWHQLLWYCSDNNS 811
P W + L +C S
Sbjct: 2847 CPLWSRFLDFCEAQKS 2862
Score = 74 (31.1 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDAR---------------LLVCAPSNSAADHLLE 456
+I+GPPGTGKT+ + L + E A LL+C+PS+ + D L E
Sbjct: 2403 VIHGPPGTGKTVVGLHIAYWLCQSNEQAAARGPHGGDEQMGGPCLLLCSPSSKSVDVLAE 2462
Query: 457 KILGEKAVEVRENEIF 472
+L +A E++ ++
Sbjct: 2463 LLLSRRA-ELKPLRVY 2477
>TAIR|locus:2126480 [details] [associations]
symbol:AT4G30100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002687 EMBL:AL161576
GO:GO:0004519 eggNOG:COG1112 EMBL:AL078464 KO:K10706
InterPro:IPR026852 PANTHER:PTHR10887:SF27 HOGENOM:HOG000084788
ProtClustDB:CLSN2683158 IPI:IPI00535923 PIR:T08986
RefSeq:NP_194739.1 UniGene:At.31859 ProteinModelPortal:Q9SZW3
SMR:Q9SZW3 STRING:Q9SZW3 PaxDb:Q9SZW3 PRIDE:Q9SZW3
EnsemblPlants:AT4G30100.1 GeneID:829133 KEGG:ath:AT4G30100
TAIR:At4g30100 InParanoid:Q9SZW3 PhylomeDB:Q9SZW3
ArrayExpress:Q9SZW3 Genevestigator:Q9SZW3 Uniprot:Q9SZW3
Length = 1311
Score = 291 (107.5 bits), Expect = 6.3e-26, Sum P(4) = 6.3e-26
Identities = 102/319 (31%), Positives = 152/319 (47%)
Query: 512 IIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQ 571
I+ +T S+ + G F + +DEA QASE + P++ + VL GDP Q
Sbjct: 918 IVFTTVSSSGRKLFSRLTHG-FDMVVIDEAAQASEVGVLPPLALGAAR---CVLVGDPQQ 973
Query: 572 LGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYE 631
L + S+ A T +S ER F+ C L YR HPQI PS+ FY+
Sbjct: 974 LPATVISKAAGTLLYSRSLFER-FQLAG-CP-----TLLLTVQYRMHPQIRDFPSRYFYQ 1026
Query: 632 EELIACKDESISCTAYLNFLPNKEF-PVLFFGIQ-GCDEREGSNPSWFN----RIEVSKV 685
L ES+S + + P LFF I G + G + S+ N R V
Sbjct: 1027 GRLT--DSESVSTAPDEIYYKDSVLKPYLFFDISHGRESHRGGSVSYENIDEARFCVGVY 1084
Query: 686 VEIIQKLTSTGNLSEEDIGVITPYRQQV--LKLN--KALESLYMPDIKVGSVEQFQGQER 741
+ + + L S G + +GVITPY+ Q+ LK+ AL + +I + +V+ FQGQER
Sbjct: 1085 LHLQRTLKSLGG-GKVSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQGQER 1143
Query: 742 QVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQ 801
VII+S VR++ H +GF+++ RR NVA+TRA L ++GN + K W
Sbjct: 1144 DVIIMSCVRAS--------NHGVGFVADIRRMNVALTRAKRALWVMGNASALMKCEDWAA 1195
Query: 802 LLWYCSDNNSYQGC-ALPE 819
L+ N + +LP+
Sbjct: 1196 LITDAKARNCFMEMESLPK 1214
Score = 76 (31.8 bits), Expect = 6.3e-26, Sum P(4) = 6.3e-26
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 440 RLLVCAPSNSAADHLLEKILGEKAVEVRENEIFR 473
R+LVCAPSN+A D LL ++L ++ E ++R
Sbjct: 743 RMLVCAPSNAATDELLSRVLDRGFID-GEMRVYR 775
Score = 61 (26.5 bits), Expect = 6.3e-26, Sum P(4) = 6.3e-26
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 404 GLKGAPPY---LIYGPPGTGKTMTL 425
G+K P+ L+ GPPGTGKT T+
Sbjct: 652 GVKRQDPWPFTLVQGPPGTGKTHTV 676
Score = 50 (22.7 bits), Expect = 6.3e-26, Sum P(4) = 6.3e-26
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 15 EKRDIGFID-FEDYKSECSYNPSEEDPVQISFPFPFIDGKPQSVS-VGETAVDSITIKNT 72
E+R+ G+ D + +EC + E D +S P P +G+ V V T I +
Sbjct: 469 ERRERGWYDVILNSVNECKWAFKEGDVAVLSNPVPESEGEHDDVGRVAGTVRRYIPVD-- 526
Query: 73 TREP 76
TR+P
Sbjct: 527 TRDP 530
Score = 41 (19.5 bits), Expect = 6.9e-24, Sum P(4) = 6.9e-24
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 103 GSDSGTNRGFVEFFTLEERMIQPGQTLTIW 132
G+ SG R FTL + G+T T+W
Sbjct: 648 GTSSGVKRQDPWPFTLVQGPPGTGKTHTVW 677
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 350 (128.3 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 108/369 (29%), Positives = 180/369 (48%)
Query: 391 LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSA 450
LN Q +IE L KG LI GPPGTGKT T+ + L A ++LVC PS+++
Sbjct: 1395 LNASQFNAIETSLSKKGIT--LIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGPSHAS 1452
Query: 451 ADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPPLAALVCY 510
D + ++ L + + V ++++ D R +D+ + +
Sbjct: 1453 VDEVAKRCLKKSLINVDGKPYLPNMVRIGKLQNISPDCHRISPYDKTPAQRKEIIRNA-- 1510
Query: 511 RIIISTYMSASLIYAEGVDRGHFSH--IFLDEAGQASEPESMVPIS-SYCKKDTVVVLAG 567
I+ ST +SAS G R +F + +DE+ Q+SEP S++P+ +K ++L G
Sbjct: 1511 NIVFST-LSAS---GSGSVRSNFKANIVLVDESTQSSEPASLIPLCIGNIEK---LILVG 1563
Query: 568 DPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSK 627
DP+QL P I+S + G+ S ERL + P V L YR HP I PS
Sbjct: 1564 DPLQLPPTIFSSGSAENGLNISLFERLSKVLP--------VEMLNTQYRMHPTISRFPSN 1615
Query: 628 LFYEEELIACKDESISCTAYL--NFLPNKEF-PVLFFGIQGCDEREGSNPSWFNRIEVSK 684
FY++ L+ +++ Y NF + ++ P+ F+ + E G S N++E++
Sbjct: 1616 QFYKDRLL--DGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKR-SLKNKLEITM 1672
Query: 685 VVEIIQKLTST-GNLSEEDIGVITPYRQQVLKLNKALESLYMP-DIKVGSVEQFQGQERQ 742
V +I+KL + G+ITPY+ Q ++ + + P +I+ +++ QG E+
Sbjct: 1673 VFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLNIETSTIDGVQGSEKD 1732
Query: 743 VIIVSTVRS 751
+II+S VRS
Sbjct: 1733 IIILSCVRS 1741
Score = 289 (106.8 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 91/317 (28%), Positives = 157/317 (49%)
Query: 563 VVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQIL 622
++L GDP+QL P I+S + G+ S ERL + P V L YR HP I
Sbjct: 1559 LILVGDPLQLPPTIFSSGSAENGLNISLFERLSKVLP--------VEMLNTQYRMHPTIS 1610
Query: 623 HLPSKLFYEEELIACKDESISCTAYL--NFLPNKEF-PVLFFGIQGCDEREGSNPSWFNR 679
PS FY++ L+ +++ Y NF + ++ P+ F+ + E G S N+
Sbjct: 1611 RFPSNQFYKDRLL--DGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKR-SLKNK 1667
Query: 680 IEVSKVVEIIQKLTST-GNLSEEDIGVITPYRQQVLKLNKALESLYMP-DIKVGSVEQFQ 737
+E++ V +I+KL + G+ITPY+ Q ++ + + P +I+ +++ Q
Sbjct: 1668 LEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLNIETSTIDGVQ 1727
Query: 738 GQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDP 797
G E+ +II+S VRS +R +GFLS+ RR NVA+TRA L +IGN ++ KD
Sbjct: 1728 GSEKDIIILSCVRS-------ER---IGFLSDRRRINVALTRAKFGLFVIGNSKLLKKDR 1777
Query: 798 YWHQLLWYCSDNNSY-----QGCALPERE--EFADEDPTAAECWNHEEEIPQSFQEDNWN 850
W Y NS +G ++ E++ E+ +P ++ + E + D +
Sbjct: 1778 TWGPFCQYVHSINSMVSIDSKGISVLEQQIQEYDSLNPNGLIEFHSDSED----EYDGKD 1833
Query: 851 QEPFQAENLKPVKDEDE 867
+E + E+ + +++ DE
Sbjct: 1834 EEEDEDEDNEEIQEHDE 1850
Score = 49 (22.3 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 802 LLWYCSDN-NSYQGCALPEREEFADEDPTAAECWNHEEEIPQSFQEDNWNQEPFQAENLK 860
L+ + SD+ + Y G ++E DED E H+E+ +S + NQE ++L
Sbjct: 1818 LIEFHSDSEDEYDG-----KDEEEDEDEDNEEIQEHDED-DESNRIKKINQEGEDNDDLD 1871
Query: 861 PVKDEDEW 868
D+DE+
Sbjct: 1872 D--DDDEY 1877
Score = 42 (19.8 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 461 EKAVEVRENEIFRLNAPSRPYEDVNADHIRFC 492
+K V+ + F L++ S + +N H RFC
Sbjct: 740 DKNFTVKNSPTF-LDSRSEAFNLLNTHHQRFC 770
Score = 39 (18.8 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 234 GLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRK 272
GL +K Y F LL +E +KE D +T + +
Sbjct: 376 GL-IKKYPGFKSELLSVETF-IKESQTNIDSVKITTLNQ 412
Score = 37 (18.1 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 10/49 (20%), Positives = 22/49 (44%)
Query: 822 EFADEDPTAAECWNHEEEIPQSFQEDNWNQEPFQAENLKPVKDEDEWSD 870
EF + + + EE+ + +E + E ++ +K + E E +D
Sbjct: 1820 EFHSDSEDEYDGKDEEEDEDEDNEEIQEHDEDDESNRIKKINQEGEDND 1868
>CGD|CAL0003335 [details] [associations]
symbol:SEN1 species:5476 "Candida albicans" [GO:0035649 "Nrd1
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0031126 "snoRNA
3'-end processing" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR014016 InterPro:IPR024714 PROSITE:PS51198
CGD:CAL0003335 GO:GO:0005524 GO:GO:0005634 GO:GO:0008033
GO:GO:0004386 eggNOG:COG1112 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_723003.1 RefSeq:XP_723150.1 ProteinModelPortal:Q5ANG6
STRING:Q5ANG6 GeneID:3635255 GeneID:3635333 KEGG:cal:CaO19.13359
KEGG:cal:CaO19.5938 Uniprot:Q5ANG6
Length = 2018
Score = 318 (117.0 bits), Expect = 5.1e-25, Sum P(2) = 5.1e-25
Identities = 94/288 (32%), Positives = 146/288 (50%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLE 592
F + +DEA Q E +++P+ CKK ++ GDP QL P + S+ A +Y +Y +
Sbjct: 1535 FDQVIIDEACQCLELSAIIPLRYGCKK---CIMVGDPNQLPPTVLSQAAASY----NYEQ 1587
Query: 593 RLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLP 652
LF H + Y+ + YR HP I PS FY +L KD LN P
Sbjct: 1588 SLFVRMQKNHPDSVYMLDV--QYRMHPMISKFPSSEFYNSKL---KDGDGMLE--LNTRP 1640
Query: 653 -NKEFPVL---FFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTST--GNLSEEDIGVI 706
+K+ P+ FF I G E+ S FN E +++ KL + IG+I
Sbjct: 1641 WHKDPPLTPYRFFDILGKHEKNELTRSLFNTDEAIVALQLTDKLMQLLPQDKFSGKIGII 1700
Query: 707 TPYRQQVLKLNKALESLY----MPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKH 762
+PY++Q+ K+ + Y + +I +V+ FQGQE+++II+S VR++ N
Sbjct: 1701 SPYKEQIRKIKEVFVRKYGKPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGN------ 1754
Query: 763 CLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNN 810
+GFLS+ RR NVA+TRA + L I+GN +S++ W +LL + N
Sbjct: 1755 -VGFLSDVRRMNVALTRAKTTLWILGNKDSLSRNEVWKKLLTDAGERN 1801
Score = 63 (27.2 bits), Expect = 5.1e-25, Sum P(2) = 5.1e-25
Identities = 10/22 (45%), Positives = 18/22 (81%)
Query: 437 EDARLLVCAPSNSAADHLLEKI 458
+ A++L+CAPSN+A D L+ ++
Sbjct: 1359 DKAKILICAPSNAAVDELVLRL 1380
Score = 62 (26.9 bits), Expect = 6.5e-25, Sum P(2) = 6.5e-25
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSA 450
LI GPPGTGKT T++ + + ++ +++ + S S+
Sbjct: 1316 LIQGPPGTGKTKTILGIVGYSLSQEKNNKVIDISGSGSS 1354
>TAIR|locus:2173033 [details] [associations]
symbol:AT5G52090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0004519 eggNOG:COG1112
EMBL:AB015478 KO:K10706 IPI:IPI00525648 RefSeq:NP_200022.1
UniGene:At.65668 ProteinModelPortal:Q9FJ83 SMR:Q9FJ83 PRIDE:Q9FJ83
EnsemblPlants:AT5G52090.1 GeneID:835285 KEGG:ath:AT5G52090
TAIR:At5g52090 HOGENOM:HOG000083772 InParanoid:Q9FJ83 OMA:TACEASE
PhylomeDB:Q9FJ83 ProtClustDB:CLSN2686886 Genevestigator:Q9FJ83
Uniprot:Q9FJ83
Length = 676
Score = 249 (92.7 bits), Expect = 6.3e-25, Sum P(2) = 6.3e-25
Identities = 94/316 (29%), Positives = 150/316 (47%)
Query: 512 IIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQ 571
II+ T A+ + E G+ + +DEA Q E ES+ + + +++ GD Q
Sbjct: 345 IILCTASGAAEMNVERT--GNVELLVVDEAAQLKECESVAALQLPGLRHAILI--GDEFQ 400
Query: 572 LGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYE 631
L ++++ E G+S ERL G+ ++ + YR HP I P+K FY
Sbjct: 401 LPAMVHNEMCEKAKFGRSLFERLVLL-----GHNKHLLDV--QYRMHPSISRFPNKEFYG 453
Query: 632 EELIACKD-ESISCTAYLN-FLPNKEFPVLFFGIQGCDERE-GSNPSWFNRIEVSKVVEI 688
+ KD E++ + Y FL F F G + E G S N +EV+ + EI
Sbjct: 454 GRI---KDAENVKESIYQKRFLKGNMFDSFSFINVGRGKEEFGDGHSPKNMVEVAVISEI 510
Query: 689 IQKL--TSTGNLSEEDIGVITPYRQQVLKLNKALESLYMP------DIKVGSVEQFQGQE 740
I L S + +GV++PY+ Q+ + + + Y + V SV+ FQG E
Sbjct: 511 ISNLYKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFTLNVRSVDGFQGGE 570
Query: 741 RQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVS-KDPYW 799
+II+STVRS N + +GFL+N +R NVA+TRA L +IGN ++ W
Sbjct: 571 EDIIIISTVRS----NGNGK---VGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIW 623
Query: 800 HQLLWYCSDNNSYQGC 815
L+ S++ + +GC
Sbjct: 624 ATLI---SESRT-RGC 635
Score = 120 (47.3 bits), Expect = 6.3e-25, Sum P(2) = 6.3e-25
Identities = 50/169 (29%), Positives = 77/169 (45%)
Query: 345 YNRVNMRRLYQATDAAQELDTEFLFPSESSGIRLIESNTLVPI--SCNLNEEQMCSIEKI 402
+N ++ L ++ A TE F SE+ G S+ ++ I S LN Q +I
Sbjct: 14 HNEADISTLTKSVLQANTEGTEQCFCSENDG----RSDLVLDIIRSTKLNSSQEDAILGC 69
Query: 403 LGLKGAPPY----LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKI 458
L + LI+GPP TGKT T+ + L R + +VCAP+N+A + ++
Sbjct: 70 LETRNCTHKNSVKLIWGPPRTGKTKTVATLLFALLKLR--CKTVVCAPTNTAIVQVTSRL 127
Query: 459 LGE-KAVEVRENEIFRLN----APSRPYEDVNA-DHIRF-CFFDEQIFK 500
L K EN +RL + +R +N DH+ F DE+I K
Sbjct: 128 LSLFKENSTAENATYRLGNIILSGNRDRMGINKNDHVLLDVFLDERIGK 176
Score = 39 (18.8 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 67 ITIKNTTREPVELWSKIYASTPENTFTLSVMKPPSPGSD 105
+T+ TR +W+ ++ +T T SV++ + G++
Sbjct: 1 MTLTTNTR----IWNALHNEADISTLTKSVLQANTEGTE 35
>UNIPROTKB|J9NRI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Ensembl:ENSCAFT00000046272 Uniprot:J9NRI6
Length = 640
Score = 316 (116.3 bits), Expect = 6.8e-25, P = 6.8e-25
Identities = 141/510 (27%), Positives = 238/510 (46%)
Query: 349 NMRRLYQATDAAQEL-DT--EFLFPSESSGIRLI----ESNTLVPISCNLNEEQMCSIEK 401
N+ +L + T +Q+L D +F P S + + +T+ I LN+ Q +++K
Sbjct: 156 NLSKLMENTCVSQKLRDLIIDFREPQFISYLSSVLPYDAKDTVACILKGLNKPQRQAMKK 215
Query: 402 ILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGE 461
+L K LI G PGTGKT T+ + LY +L+ + ++SA D++L K+
Sbjct: 216 VLLSKDYT--LIVGMPGTGKTTTICTLVRILYTC--GFSVLLTSYTHSAVDNILLKLAKF 271
Query: 462 KAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPPLAALVC-------YRIII 514
K RL + ++D+ F +E+I + P+ +L +RI+
Sbjct: 272 KI------GFLRLGRTQKVHQDIQK------FTEEEICRSKPIKSLALLEELYNSHRIVA 319
Query: 515 STYMSASL-IYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLG 573
+T M + I++ R F +DEA Q S+P + P+ + ++ VL GD QL
Sbjct: 320 TTCMGINHPIFS----RKTFDFCIVDEASQISQPICLGPLF-FSQR---FVLVGDHQQLP 371
Query: 574 PVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEE 633
P++ +REA GM +S +RL + N+N V +L YR + +I+ L +KL Y+ +
Sbjct: 372 PLVLNREARALGMSESLFKRLEQ-------NKNAVVQLTVQYRMNSKIMSLSNKLTYDGK 424
Query: 634 LIACKDESISCTAYLNFLPNKEFPVLFFGIQG-----CDEREGSNPSWF---------NR 679
L D+ + L L + + + F+ E +NP F +
Sbjct: 425 LECGSDKVANAVVNLPNLKDVKLELEFYADYSENPWMIGAFEPNNPVCFLNTDKVPAPEQ 484
Query: 680 IE---VSKVVE--IIQKLTST---GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVG 731
+E VS + E +I LTS DIG+I PYRQQ+ +N L + ++V
Sbjct: 485 VEKGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSSIRMVEVN 544
Query: 732 SVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPH 791
+V+++QG+++ +I+VS VRS K L + RR NVA+TRA LI++G
Sbjct: 545 TVDKYQGRDKSIILVSFVRSN-KDGPIGE-----LLKDWRRLNVAITRAKHKLILLGCVP 598
Query: 792 IVSKDPYWHQLLWYCSDNNSYQGCALPERE 821
+++ P +LL + + LP E
Sbjct: 599 SLNRYPPLGKLLHHLNSEKLIMD--LPSEE 626
>RGD|1306791 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO;ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=ISO;ISS] [GO:0004518 "nuclease activity" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=ISO;ISS]
[GO:0006264 "mitochondrial DNA replication" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA;ISO] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISO;ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISO;ISS] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO;ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO;ISS] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA;ISO] [GO:0045740 "positive regulation of DNA
replication" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
RGD:1306791 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0006284
GO:GO:0003677 GO:GO:0051539 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043137 GO:GO:0005760 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 IPI:IPI00368049
ProteinModelPortal:D3ZG52 Ensembl:ENSRNOT00000000438
UCSC:RGD:1306791 OrthoDB:EOG4CZBF7 Uniprot:D3ZG52
Length = 1059
Score = 319 (117.4 bits), Expect = 9.6e-25, P = 9.6e-25
Identities = 145/507 (28%), Positives = 236/507 (46%)
Query: 349 NMRRLYQATDAAQ---ELDTEFLFPSE----SSGIRLIESNTLVPISCNLNEEQMCSIEK 401
N+ +L + TD+++ EL +F P SS + +T+ I LN+ Q +++K
Sbjct: 577 NLSKLMENTDSSKRLRELIIDFKEPQFIAYLSSVLPHDAKDTVANILKGLNKPQRQAMKK 636
Query: 402 ILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGE 461
+L K LI G PGTGKT T+ + L A +L+ + ++SA D++L K+
Sbjct: 637 VLLSKDYT--LIVGMPGTGKTTTICALVRILSAC--GFSVLLTSYTHSAVDNILLKLAKF 692
Query: 462 KAVEVRENEIFRLNAPSRPYEDVNADHIRFCF---FDEQIFKCPPLAALVCYRIIISTYM 518
K +R + +++ + + + +R E+++ P+ A C I +
Sbjct: 693 KIGFLRLGQSHKVHPDIQKFTEEEMCRLRSIASLAHLEELYNSHPVVATTCMGISHPMF- 751
Query: 519 SASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYS 578
R F +DEA Q S+P + P+ + ++ VL GD QL P++ +
Sbjct: 752 ----------SRKTFDFCIVDEASQISQPICLGPLF-FSRR---FVLVGDHKQLPPLVLN 797
Query: 579 REAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACK 638
REA GM +S +RL NE+ V +L YR + +I+ L +KL YE +L C
Sbjct: 798 REARALGMSESLFKRL-------ERNESAVVQLTIQYRMNRKIMSLSNKLTYEGKL-ECG 849
Query: 639 DESISCTAYLNFLPNKEFPVLFFGIQGCDER------EGSNPSWF---------NRIE-- 681
+ ++ A + LPN + L F D E NP F +IE
Sbjct: 850 SDRVA-NAVIT-LPNLKDVRLEFYADYSDNPWLAGVFEPDNPVCFLNTDKVPAPEQIENG 907
Query: 682 -VSKVVE--IIQKLTST---GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQ 735
VS V E +I LTST S DIG+I PYRQQ+ + L + ++V +V++
Sbjct: 908 GVSNVTEARLIVFLTSTFIKAGCSPSDIGIIAPYRQQLRTITDLLARSSVGMVEVNTVDK 967
Query: 736 FQGQERQVIIVSTVRSTIKHNDFDRKHCLG-FLSNPRRFNVAVTRAISLLIIIGNPHIVS 794
+QG+++ +I+VS VRS + LG L + RR NVA+TRA LI++G+ +
Sbjct: 968 YQGRDKSLILVSFVRS-------NEDGTLGELLKDWRRLNVAITRAKHKLILLGSVSSLK 1020
Query: 795 KDPYWHQLLWYCSDNNSYQGCALPERE 821
+ P +L + + LP RE
Sbjct: 1021 RFPPLEKLFDHLNAEQLISN--LPSRE 1045
>UNIPROTKB|G4NIZ8 [details] [associations]
symbol:MGG_02784 "DNA-binding protein SMUBP-2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR024714 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0008033 GO:GO:0004386 EMBL:CM001237
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_003720957.1 EnsemblFungi:MGG_02784T0 GeneID:2682672
KEGG:mgr:MGG_02784 Uniprot:G4NIZ8
Length = 2037
Score = 294 (108.6 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 91/299 (30%), Positives = 145/299 (48%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLE 592
F + +DEA Q E +++P+ K +L GDP QL P + S+ A YG +S
Sbjct: 1574 FETVIIDEAAQCVELSALIPLKYGASK---CILVGDPKQLPPTVLSQSAARYGYDQSLFV 1630
Query: 593 RLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLP 652
R+ + P G V L YR HP+I PSK FYE L D A L P
Sbjct: 1631 RMQQNHP---GK---VHLLDCQYRMHPEISLYPSKEFYEGLLADGSD-----MAKLRQQP 1679
Query: 653 NKEFPVL----FFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEE---DIGV 705
+ P+L FF ++G ER S N E++ ++I K + S + IG+
Sbjct: 1680 WHDNPLLGPYRFFDVEGIQERGSRGQSLVNTNEINVAIQIYTKFQADYASSIDMKGKIGI 1739
Query: 706 ITPYRQQVLKLNKALESLY----MPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRK 761
ITPY+ Q+ L + + + + DI+ + + FQG+E ++II S VR++
Sbjct: 1740 ITPYKAQLFALRQKFQERWGEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGG----- 1794
Query: 762 HCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSY-QGCALPE 819
+GF+++ RR NV +TRA S L I+G+ + + +W++L+ + Y QG + +
Sbjct: 1795 --IGFMTDIRRMNVGLTRARSSLWILGDSRALRQGEFWNKLIEDSKARDRYTQGSIISQ 1851
Score = 96 (38.9 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 42/141 (29%), Positives = 64/141 (45%)
Query: 324 KFASDFQLNHRDENLYNVQFTYNRVNMRRLYQATDAAQELD--TEFLFPSESSGIRLIES 381
+FASD L D L ++ T N + R + A ++ Q D TE L +E S I +
Sbjct: 1260 RFASDHLLPGND--LRGLRIT-NMTTVEREFAALESLQYYDLMTEVL-DAEPSPILNFSN 1315
Query: 382 NTLVPISCN--LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATR-ED 438
+ + N LN Q +I G L+ GPPGTGKT T++ + L +
Sbjct: 1316 DRIQSYQDNYQLNRGQAAAIINAKENDGFT--LVQGPPGTGKTKTIIAMVGALLTGKISR 1373
Query: 439 ARLLVCAPSNSAADHLLEKIL 459
A P+N A + + +K+L
Sbjct: 1374 APPTRIKPANGADEPMAQKLL 1394
Score = 61 (26.5 bits), Expect = 5.4e-21, Sum P(3) = 5.4e-21
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 440 RLLVCAPSNSAADHLLEKI 458
+LLVCAPSN+A D L+ ++
Sbjct: 1392 KLLVCAPSNAAVDELVLRL 1410
Score = 38 (18.4 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 58 SVGETAVDSITIKNTTREPVELWSKIYASTP 88
S E+ IK TTR V+ + ++ S P
Sbjct: 1168 SKDESTAKPFDIKITTRTSVDKFLEVATSMP 1198
>DICTYBASE|DDB_G0274399 [details] [associations]
symbol:DDB_G0274399 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0274399 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000012 GO:GO:0004386 eggNOG:COG1112 RefSeq:XP_644230.1
ProteinModelPortal:Q86AS0 EnsemblProtists:DDB0237968 GeneID:8619659
KEGG:ddi:DDB_G0274399 OMA:LIMISLH Uniprot:Q86AS0
Length = 967
Score = 289 (106.8 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 87/252 (34%), Positives = 130/252 (51%)
Query: 563 VVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQIL 622
VVL GDP QL I S A Y +S +RL E +N L YR H I
Sbjct: 612 VVLVGDPKQLPATIISPLAIKYKYDQSLFQRLQE--------KNSPHMLTTQYRMHSLIR 663
Query: 623 HLPSKLFYEEELIACKDESISCTAYLNFLPNKEF-PVLFFGIQGCDEREGSNPSWFNRIE 681
PS+ FY++ L+ + T Y + N F P++F+ + E + S FN E
Sbjct: 664 AFPSRHFYQDLLLDGPNIPSRATHYHS---NPFFGPLVFYDLSWSTETKPGGGSVFNEHE 720
Query: 682 VSKVVEIIQKLTSTGNLSEED----IGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQ 737
+ + Q T +ED IG+I+PYRQQVL L + ++ Y P I + +V+ FQ
Sbjct: 721 CKMAMYLFQLFTKV--YPDEDFASRIGIISPYRQQVLALREIFKN-Y-PGISIDTVDGFQ 776
Query: 738 GQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDP 797
G+ER++II S VR+ ++ +GFLS+ RR NVA+TR S L+I+GN +S +
Sbjct: 777 GREREIIIFSCVRAPVEEGAG-----IGFLSDVRRMNVALTRPRSSLLILGNTKALSINK 831
Query: 798 YWHQLLWYCSDN 809
W++L+ + +N
Sbjct: 832 DWNELIQHTQNN 843
Score = 268 (99.4 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 80/229 (34%), Positives = 116/229 (50%)
Query: 531 GHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSY 590
G F + +DEA QA E +++PI CKK VVL GDP QL I S A Y +S
Sbjct: 583 GGFDIVIIDEAAQAVETSTLIPIQHGCKK---VVLVGDPKQLPATIISPLAIKYKYDQSL 639
Query: 591 LERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF 650
+RL E +N L YR H I PS+ FY++ L+ + T Y +
Sbjct: 640 FQRLQE--------KNSPHMLTTQYRMHSLIRAFPSRHFYQDLLLDGPNIPSRATHYHS- 690
Query: 651 LPNKEF-PVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEED----IGV 705
N F P++F+ + E + S FN E + + Q T +ED IG+
Sbjct: 691 --NPFFGPLVFYDLSWSTETKPGGGSVFNEHECKMAMYLFQLFTKV--YPDEDFASRIGI 746
Query: 706 ITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIK 754
I+PYRQQVL L + ++ Y P I + +V+ FQG+ER++II S VR+ ++
Sbjct: 747 ISPYRQQVLALREIFKN-Y-PGISIDTVDGFQGREREIIIFSCVRAPVE 793
Score = 78 (32.5 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 30/105 (28%), Positives = 54/105 (51%)
Query: 388 SCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAI-LQLYATREDARLLVCAP 446
S N+ Q+ ++ L+G LI GPPGTGKT ++ I + L++T V +
Sbjct: 332 SSTYNDSQLNALTS--ALEGNAITLIQGPPGTGKTHVILGLISVLLHSTIVPK---VKSG 386
Query: 447 SNSAADHLLEKILGEKAVEVREN-EIFRLNAPSRPYEDVNADHIR 490
N+ DHLL+ ++ + + E +++ + S+P+ + HIR
Sbjct: 387 GNNLGDHLLK----DRELSMAEKRDLWNI---SQPWFNKEFPHIR 424
Score = 61 (26.5 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 9/20 (45%), Positives = 16/20 (80%)
Query: 440 RLLVCAPSNSAADHLLEKIL 459
R+L+CAPSN A D ++ +++
Sbjct: 463 RILLCAPSNGAVDEIVSRLI 482
>TAIR|locus:2152627 [details] [associations]
symbol:AT5G37030 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002688 GO:GO:0004519 KO:K10706
IPI:IPI00540124 RefSeq:NP_198519.1 UniGene:At.55172
ProteinModelPortal:F4K5V7 SMR:F4K5V7 PRIDE:F4K5V7
EnsemblPlants:AT5G37030.1 GeneID:833673 KEGG:ath:AT5G37030
Uniprot:F4K5V7
Length = 638
Score = 309 (113.8 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 121/410 (29%), Positives = 190/410 (46%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILG--EKAVEVRE- 468
LI+GP KT T+ +L L R + +VCAP+N+A + ++L K E
Sbjct: 229 LIWGPL---KTKTVATLLLVLLKLR--CKTVVCAPTNTAIVEVTSRLLALSNKYSEHATY 283
Query: 469 --NEIFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPPLAALVC-YRIIISTYMSASLIYA 525
IF L + + D++R F D +I K L C ++ + + + L+
Sbjct: 284 GLGNIF-LAGNQKRMRIKDTDYLRNVFLDHRISKLRKLFLSTCGWKQSLESIID--LLEN 340
Query: 526 EGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYG 585
G+ + +DEA Q E ES+ + + +++ GD QL ++++ + E
Sbjct: 341 TETKTGNIEVLVVDEAAQLKECESVAALQLPGLRHAILI--GDEFQLPAMVHNDQCEKAK 398
Query: 586 MGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEEL--IACKDESIS 643
G+S ERL G++ ++ + YR HP I P K FY + A ESI
Sbjct: 399 FGRSLFERLVLL-----GHKKHLLDV--QYRMHPSISRFPYKEFYGGRIKDAANVQESIY 451
Query: 644 CTAYLNFLPNKEFPVLFFGIQGCDE-REGSNPSWFNRIEVSKVVEIIQKL--TSTGNLSE 700
+L F + G +G +E +G +P N +EV+ V EII L S +
Sbjct: 452 QKRFLQGNMFGSFSFINVG-RGKEEFGDGDSPK--NMVEVAVVSEIISNLFKVSRERKMK 508
Query: 701 EDIGVITPYRQQVLKLNKALESLYMP------DIKVGSVEQFQGQERQVIIVSTVRSTIK 754
+GVITPY+ QV + + + Y + V SV+ FQG E +II+STVRS
Sbjct: 509 MSVGVITPYKGQVRAIQERIRDKYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRS--- 565
Query: 755 HNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKD-PYWHQLL 803
N + +GFLSN +R NVA+TRA L +IGN +++ W L+
Sbjct: 566 -NSNGK---VGFLSNRQRANVALTRARHCLWVIGNESTLARSGSIWANLI 611
>TAIR|locus:2166173 [details] [associations]
symbol:AT5G37150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004386
KO:K10706 IPI:IPI01020555 RefSeq:NP_198531.2 UniGene:At.55176
ProteinModelPortal:F4K5W5 SMR:F4K5W5 PRIDE:F4K5W5
EnsemblPlants:AT5G37150.1 GeneID:833688 KEGG:ath:AT5G37150
OMA:RSVDEYY Uniprot:F4K5W5
Length = 839
Score = 250 (93.1 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 96/323 (29%), Positives = 152/323 (47%)
Query: 512 IIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQ 571
II+ T A+ + E G+ + +DEA Q E ES+ + + +++ GD Q
Sbjct: 508 IILCTASGAAEMNVERT--GNVELLVVDEAAQLKECESVAALQLPGLRHAILI--GDEFQ 563
Query: 572 LGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYE 631
L ++++ E G+S ERL G+ ++ + YR HP I P+K FY
Sbjct: 564 LPAMVHNEMCEKAKFGRSLFERLVLL-----GHNKHLLDV--QYRMHPSISRFPNKEFYG 616
Query: 632 EELIACKD-ESISCTAYLN-FLPNKEFPVLFFGIQGCDERE-GSNPSWFNRIEVSKVVEI 688
+ KD E++ + Y FL F F G + E G S N +EV+ V EI
Sbjct: 617 GRI---KDAENVKESIYQKRFLQGNMFGSFSFINVGRGKEEFGDGHSPKNMVEVAVVSEI 673
Query: 689 IQKL--TSTGNLSEEDIGVITPYRQQVLKLNKALESLYMP------DIKVGSVEQFQGQE 740
I L S + +GV++PY+ Q+ + + + Y + V SV+ FQG E
Sbjct: 674 ISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFALNVRSVDGFQGGE 733
Query: 741 RQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVS-KDPYW 799
+II+STVRS N + +GFL+N +R NVA+TRA L +IGN ++ W
Sbjct: 734 EDIIIISTVRS----NSNGK---VGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIW 786
Query: 800 HQLLWYCSDNNSYQGCALPEREE 822
L+ S++ + +GC +E
Sbjct: 787 ATLI---SESRT-RGCFYDATDE 805
Score = 114 (45.2 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 33/96 (34%), Positives = 50/96 (52%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGE-KAVEVRENE 470
LI+GPPGTGKT T+ + L R + +VCAP+N+A + ++L K EN
Sbjct: 246 LIWGPPGTGKTKTVATLLFALLKLR--CKTVVCAPTNTAIVQVASRLLSLFKENSTSENA 303
Query: 471 IFRLN----APSRPYEDVNA-DHIRF-CFFDEQIFK 500
+RL + +R ++ DH+ F DE+I K
Sbjct: 304 TYRLGNIILSGNRDRMGIHKNDHVLLDVFLDERIGK 339
>UNIPROTKB|F6UZP1 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH Ensembl:ENSCAFT00000021752
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Uniprot:F6UZP1
Length = 1021
Score = 318 (117.0 bits), Expect = 7.0e-24, Sum P(2) = 7.0e-24
Identities = 141/510 (27%), Positives = 238/510 (46%)
Query: 349 NMRRLYQATDAAQEL-DT--EFLFPSESSGIRLI----ESNTLVPISCNLNEEQMCSIEK 401
N+ +L + T +Q+L D +F P S + + +T+ I LN+ Q +++K
Sbjct: 545 NLSKLMENTCVSQKLRDLIIDFREPQFISYLSSVLPYDAKDTVACILKGLNKPQRQAMKK 604
Query: 402 ILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGE 461
+L K LI G PGTGKT T+ + LY +L+ + ++SA D++L K+
Sbjct: 605 VLLSKDYT--LIVGMPGTGKTTTICTLVRILYTC--GFSVLLTSYTHSAVDNILLKLAKF 660
Query: 462 KAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPPLAALVC-------YRIII 514
K RL + ++D+ F +E+I + P+ +L +RI+
Sbjct: 661 KI------GFLRLGRTQKVHQDIQK------FTEEEICRSKPIKSLALLEELYNSHRIVA 708
Query: 515 STYMSASL-IYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLG 573
+T M + I++ R F +DEA Q S+P + P+ + ++ VL GD QL
Sbjct: 709 TTCMGINHPIFS----RKTFDFCIVDEASQISQPICLGPLF-FSQR---FVLVGDHQQLP 760
Query: 574 PVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEE 633
P++ +REA GM +S +RL + N+N V +L YR + +I+ L +KL Y+ +
Sbjct: 761 PLVLNREARALGMSESLFKRLEQ-------NKNAVVQLTVQYRMNSKIMSLSNKLTYDGK 813
Query: 634 LIACKDESISCTAYLNFLPNKEFPVLFFGIQG-----CDEREGSNPSWF---------NR 679
L D+ + L L + + + F+ E +NP F +
Sbjct: 814 LECGSDKVANAVVNLPNLKDVKLELEFYADYSENPWMIGAFEPNNPVCFLNTDKVPAPEQ 873
Query: 680 IE---VSKVVE--IIQKLTST---GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVG 731
+E VS + E +I LTS DIG+I PYRQQ+ +N L + ++V
Sbjct: 874 VEKGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSSIRMVEVN 933
Query: 732 SVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPH 791
+V+++QG+++ +I+VS VRS K L + RR NVA+TRA LI++G
Sbjct: 934 TVDKYQGRDKSIILVSFVRSN-KDGPIGE-----LLKDWRRLNVAITRAKHKLILLGCVP 987
Query: 792 IVSKDPYWHQLLWYCSDNNSYQGCALPERE 821
+++ P +LL + + LP E
Sbjct: 988 SLNRYPPLGKLLHHLNSEKKIMD--LPSEE 1015
Score = 44 (20.5 bits), Expect = 7.0e-24, Sum P(2) = 7.0e-24
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 273 GLYLSLVVPGLAERRPSLVNGDF-----IF-AKHAYEDTSSAYQGFIHRVEADEVHLK 324
G L L +P L R N DF F A D SS G + +++ + HLK
Sbjct: 345 GTELILRIPTLYWHRAGCTNCDFERCRSFFRAVEQQTDDSSVPIGMLPKIKEETQHLK 402
>WB|WBGene00001016 [details] [associations]
symbol:dna-2 species:6239 "Caenorhabditis elegans"
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0006259 "DNA
metabolic process" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005634 GO:GO:0009792
eggNOG:COG1112 GO:GO:0017108 GO:GO:0000014 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OMA:EHESLCH GO:GO:0043141 EMBL:Z50070
PIR:T22132 RefSeq:NP_496515.1 ProteinModelPortal:Q20371 SMR:Q20371
STRING:Q20371 PaxDb:Q20371 PRIDE:Q20371 EnsemblMetazoa:F43G6.1a
GeneID:174809 KEGG:cel:CELE_F43G6.1 UCSC:F43G6.1a CTD:174809
WormBase:F43G6.1a HOGENOM:HOG000016745 InParanoid:Q20371
NextBio:885596 ArrayExpress:Q20371 Uniprot:Q20371
Length = 1105
Score = 320 (117.7 bits), Expect = 7.0e-24, Sum P(2) = 7.0e-24
Identities = 143/528 (27%), Positives = 247/528 (46%)
Query: 311 GF--IHRVEADEVHLKFASDFQLNHRDE-----NLYNVQFTYNRV--NMRRLYQATDAAQ 361
GF I V D+ +K ++D + R E + Y T++ N+ L Q + +
Sbjct: 592 GFALIDEVSDDQQIVKISTDKTIKSRYEAPFHLDKYTSMSTHSTTLGNLVYLLQNDEIGK 651
Query: 362 ELDT---EFLFP--SESSGIRLIESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGP 416
L + L P +++G L + + I LN EQ ++ L + ++ G
Sbjct: 652 RLRNILVDLLPPIIMDATGFNLTPAIKKIIIKAKLNNEQRKAVVHALATEDF--MMVEGL 709
Query: 417 PGTGKTMTLVEAILQ-LYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLN 475
PG+GKT TL+ ++Q L AT + ++L+ A ++SA D++L K+ E A E +I RL
Sbjct: 710 PGSGKT-TLISVLIQCLVATNK--KVLLAAFTHSAVDNILTKLTKEVAAE----KILRLG 762
Query: 476 APSRPYEDVNADHIRFCFFDE----------QIFKCPPLAALVCYRIIISTYMSASLIYA 525
+ S +D+ ++ +E ++ K P+ A C+ + L+++
Sbjct: 763 SSSSIKDDIKKMTLKAKLENETSEEYYAAVRKVMKTTPIVACTCHHV------PRELLFS 816
Query: 526 EGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYG 585
HF + +DEA EP ++P+ + K VL GD QL P++ SR+A+ G
Sbjct: 817 YR----HFDVVIVDEASMVLEP-LLLPVLATSNK---FVLVGDCKQLTPLVVSRKAKQEG 868
Query: 586 MGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCT 645
G S +E+L + P V L YR + +I L SKLFYE LI C +ES+S +
Sbjct: 869 AGISTMEKLQQSHP------GVVVSLTSQYRMNREISVLSSKLFYENRLI-CGNESVSRS 921
Query: 646 A------YLNFLPNKEFPV------------LFFGIQG-------CDEREGSNPSWFNRI 680
+ Y+ + + + +F Q C++ EG N
Sbjct: 922 SLDRTGDYIVAMDDGSDHIRKALSGDIKDSCVFLDTQSTINSKMQCEDGEGGGMC--NDG 979
Query: 681 EVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQE 740
E + E+ Q+ +G + +IGV++ YR+QV + L S +++V +++ +QG+E
Sbjct: 980 EAKLISELCQQFVMSG-VKPHEIGVMSAYRRQVDHIRGILNS---DELEVNTIDSYQGRE 1035
Query: 741 RQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIG 788
++VII S + N+ +K L L + RR NVA+TRA L+++G
Sbjct: 1036 KRVIIWSLTWT----NNSTKKSEL--LKDERRVNVALTRARQKLVVVG 1077
Score = 43 (20.2 bits), Expect = 7.0e-24, Sum P(2) = 7.0e-24
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 16 KRDIGFIDFEDYKSECS-YNPSEED 39
++D F D D+K+ CS Y +EE+
Sbjct: 451 RQDSRFCDKCDHKTMCSFYQKTEEN 475
>UNIPROTKB|P51530 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0043504 "mitochondrial
DNA repair" evidence=IDA] [GO:0006264 "mitochondrial DNA
replication" evidence=IDA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IDA] [GO:0045740 "positive regulation of DNA
replication" evidence=IDA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IDA] [GO:0006284 "base-excision repair"
evidence=IDA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=IDA] [GO:0005760
"gamma DNA polymerase complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000076 "DNA replication checkpoint"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IDA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000729 "DNA double-strand
break processing" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] [GO:0032201 "telomere
maintenance via semi-conservative replication" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0032508 "DNA
duplex unwinding" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0042645 GO:GO:0000084 GO:GO:0016890
eggNOG:COG1112 GO:GO:0045740 GO:GO:0000722 GO:GO:0000729
GO:GO:0017108 Reactome:REACT_383 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:D42046 EMBL:AL136233
EMBL:BC041115 EMBL:BC053574 EMBL:BC063664 EMBL:BC111740
EMBL:BC028188 IPI:IPI00216142 IPI:IPI00816670 IPI:IPI00816801
PIR:T50697 RefSeq:NP_001073918.2 UniGene:Hs.532446
ProteinModelPortal:P51530 SMR:P51530 STRING:P51530
PhosphoSite:P51530 DMDM:119370373 PaxDb:P51530 PRIDE:P51530
Ensembl:ENST00000358410 Ensembl:ENST00000399179
Ensembl:ENST00000549829 GeneID:1763 KEGG:hsa:1763 UCSC:uc021prt.1
GeneCards:GC10M070173 HGNC:HGNC:2939 HPA:HPA037487 MIM:601810
neXtProt:NX_P51530 InParanoid:P51530 GenomeRNAi:1763 NextBio:7187
ArrayExpress:P51530 Bgee:P51530 CleanEx:HS_DNA2
Genevestigator:P51530 GermOnline:ENSG00000138346 GO:GO:0032201
Uniprot:P51530
Length = 1060
Score = 311 (114.5 bits), Expect = 7.1e-24, P = 7.1e-24
Identities = 160/601 (26%), Positives = 276/601 (45%)
Query: 264 MENVTLMRKGLYL-SLVVPGLAERRPSLVNGDFIFAKHAYEDTSSAYQGFIHRVEADEV- 321
ME+V ++ G YL + A +L+ GD + + +G++ + V
Sbjct: 485 MEHVKIVCDGQYLHNFQCKHGAIPVTNLMAGDRVIVSGEERSLFALSRGYVKEINMTTVT 544
Query: 322 -----HLKFASDFQLNHRDENLYNVQFTYNRVNMRRLYQATDAAQEL-DT--EFLFPSES 373
+L + L D+ N N+ +L + T +++L D +F P
Sbjct: 545 CLLDRNLSVLPESTLFRLDQEEKNCDIDTPLGNLSKLMENTFVSKKLRDLIIDFREPQFI 604
Query: 374 SGIRLI----ESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAI 429
S + + +T+ I LN+ Q +++K+L K LI G PGTGKT T+ +
Sbjct: 605 SYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSKDYT--LIVGMPGTGKTTTICTLV 662
Query: 430 LQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPY---EDVNA 486
LYA +L+ + ++SA D++L K+ K +R +I +++ + + E +
Sbjct: 663 RILYAC--GFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQIQKVHPAIQQFTEQEICRS 720
Query: 487 DHIRFCFFDEQIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASE 546
I+ E+++ + A C I I++ + F +DEA Q S+
Sbjct: 721 KSIKSLALLEELYNSQLIVATTCMGI-------NHPIFSRKI----FDFCIVDEASQISQ 769
Query: 547 PESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNEN 606
P + P+ + ++ VL GD QL P++ +REA GM +S +RL + N++
Sbjct: 770 PICLGPLF-FSRR---FVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ-------NKS 818
Query: 607 YVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPV-LFFGIQG 665
V +L YR + +I+ L +KL YE +L C + ++ A +N K+ + L F
Sbjct: 819 AVVQLTVQYRMNSKIMSLSNKLTYEGKL-ECGSDKVA-NAVINLRHFKDVKLELEFYADY 876
Query: 666 CDER------EGSNPSWF---------NRIE---VSKVVE--IIQKLTST---GNLSEED 702
D E +NP F ++E VS V E +I LTS S D
Sbjct: 877 SDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSD 936
Query: 703 IGVITPYRQQVLKLNKAL-ESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRK 761
IG+I PYRQQ+ +N L S+ M ++V +V+++QG+++ +++VS VRS ++
Sbjct: 937 IGIIAPYRQQLKIINDLLARSIGM--VEVNTVDKYQGRDKSIVLVSFVRS-------NKD 987
Query: 762 HCLG-FLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPER 820
+G L + RR NVA+TRA LI++G ++ P +LL + N+ LP R
Sbjct: 988 GTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHL--NSEKLIIDLPSR 1045
Query: 821 E 821
E
Sbjct: 1046 E 1046
>UNIPROTKB|J3KPX5 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 OMA:EHESLCH ProteinModelPortal:J3KPX5
Ensembl:ENST00000399180 Uniprot:J3KPX5
Length = 1146
Score = 311 (114.5 bits), Expect = 8.0e-24, P = 8.0e-24
Identities = 160/601 (26%), Positives = 276/601 (45%)
Query: 264 MENVTLMRKGLYL-SLVVPGLAERRPSLVNGDFIFAKHAYEDTSSAYQGFIHRVEADEV- 321
ME+V ++ G YL + A +L+ GD + + +G++ + V
Sbjct: 571 MEHVKIVCDGQYLHNFQCKHGAIPVTNLMAGDRVIVSGEERSLFALSRGYVKEINMTTVT 630
Query: 322 -----HLKFASDFQLNHRDENLYNVQFTYNRVNMRRLYQATDAAQEL-DT--EFLFPSES 373
+L + L D+ N N+ +L + T +++L D +F P
Sbjct: 631 CLLDRNLSVLPESTLFRLDQEEKNCDIDTPLGNLSKLMENTFVSKKLRDLIIDFREPQFI 690
Query: 374 SGIRLI----ESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAI 429
S + + +T+ I LN+ Q +++K+L K LI G PGTGKT T+ +
Sbjct: 691 SYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSKDYT--LIVGMPGTGKTTTICTLV 748
Query: 430 LQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPY---EDVNA 486
LYA +L+ + ++SA D++L K+ K +R +I +++ + + E +
Sbjct: 749 RILYAC--GFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQIQKVHPAIQQFTEQEICRS 806
Query: 487 DHIRFCFFDEQIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASE 546
I+ E+++ + A C I I++ + F +DEA Q S+
Sbjct: 807 KSIKSLALLEELYNSQLIVATTCMGI-------NHPIFSRKI----FDFCIVDEASQISQ 855
Query: 547 PESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNEN 606
P + P+ + ++ VL GD QL P++ +REA GM +S +RL + N++
Sbjct: 856 PICLGPLF-FSRR---FVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ-------NKS 904
Query: 607 YVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPV-LFFGIQG 665
V +L YR + +I+ L +KL YE +L C + ++ A +N K+ + L F
Sbjct: 905 AVVQLTVQYRMNSKIMSLSNKLTYEGKL-ECGSDKVA-NAVINLRHFKDVKLELEFYADY 962
Query: 666 CDER------EGSNPSWF---------NRIE---VSKVVE--IIQKLTST---GNLSEED 702
D E +NP F ++E VS V E +I LTS S D
Sbjct: 963 SDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSD 1022
Query: 703 IGVITPYRQQVLKLNKAL-ESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRK 761
IG+I PYRQQ+ +N L S+ M ++V +V+++QG+++ +++VS VRS ++
Sbjct: 1023 IGIIAPYRQQLKIINDLLARSIGM--VEVNTVDKYQGRDKSIVLVSFVRS-------NKD 1073
Query: 762 HCLG-FLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPER 820
+G L + RR NVA+TRA LI++G ++ P +LL + N+ LP R
Sbjct: 1074 GTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHL--NSEKLIIDLPSR 1131
Query: 821 E 821
E
Sbjct: 1132 E 1132
>TAIR|locus:2162858 [details] [associations]
symbol:AT5G35970 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] EMBL:CP002688 GO:GO:0009570 GO:GO:0003677
GO:GO:0009941 InterPro:IPR014001 SMART:SM00487 IPI:IPI00520082
RefSeq:NP_198446.3 UniGene:At.45828 ProteinModelPortal:F4K1G7
SMR:F4K1G7 PRIDE:F4K1G7 EnsemblPlants:AT5G35970.1 GeneID:833589
KEGG:ath:AT5G35970 OMA:DHFQREL Uniprot:F4K1G7
Length = 961
Score = 238 (88.8 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 88/286 (30%), Positives = 132/286 (46%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLE 592
F + +DEAGQ+ EP +PI K+ +L+GDP QL PV+ SR+A G+G S LE
Sbjct: 662 FDLVVIDEAGQSIEPSCWIPILQG-KR---CILSGDPCQLAPVVLSRKALEGGLGVSLLE 717
Query: 593 RLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEEL-----IACK---DESISC 644
R H TKL YR + I SK Y L +A D
Sbjct: 718 RAASL----HDGV-LATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFVK 772
Query: 645 TAYLNFLP----NKEFPVLFFGIQGCDER--EGSNPSWFNRIEVSKVVEIIQKLTSTGNL 698
++ P + P + GC+ER S +N E VV + L G +
Sbjct: 773 ATWITQCPLVLLDTRMPYGSLSV-GCEERLDPAGTGSLYNEGEADIVVNHVISLIYAG-V 830
Query: 699 SEEDIGVITPYRQQVLKLNKALESLYMPD-IKVGSVEQFQGQERQVIIVSTVRSTIKHND 757
S I V +PY QV L + L+ + D ++V +++ FQG+E +I+S VRS N+
Sbjct: 831 SPMAIAVQSPYVAQVQLLRERLDDFPVADGVEVATIDSFQGREADAVIISMVRS----NN 886
Query: 758 FDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLL 803
+GFL + RR NVA+TRA + ++ + + + + +LL
Sbjct: 887 LG---AVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLL 929
Score = 123 (48.4 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 386 PISCNLNEEQMCSIEKILGL-KGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVC 444
P+S + Q +I LG+ K P ++ GPPGTGKT L E I A ++ R+LV
Sbjct: 482 PVSKLFDSSQRRAIA--LGVNKKRPVMIVQGPPGTGKTGMLKEVIT--LAVQQGERVLVT 537
Query: 445 APSNSAADHLLEKIL 459
AP+N+A D+++EK+L
Sbjct: 538 APTNAAVDNMVEKLL 552
Score = 37 (18.1 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 457 KILGEKAVEVRENEIFRLNAPSRPYEDV 484
K+L E A + E+ R A ++P + V
Sbjct: 222 KLLKEIANSAQHREVARKAAQAKPVQGV 249
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 229 (85.7 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 73/217 (33%), Positives = 110/217 (50%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLE 592
FS + +DEAGQ+ E E++ P+ C K +VL GDP QL P + S +A+ YG +S +
Sbjct: 24 FSCVIVDEAGQSCEVETLSPLIHRCNK---LVLVGDPKQLPPTVISMKAQEYGYDQSMMA 80
Query: 593 RLFEC-EPYCHGN---ENYVTKLVRNYRSHPQILHLPSKLFYEEELIACK-DESISCTAY 647
R + E N V +L YR HP I PS Y + L + E+I C++
Sbjct: 81 RFCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTETIRCSSE 140
Query: 648 LNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTG-NLSEEDIGVI 706
F P F V G G ++R+ N S+ N E+ V+EII+ + ++S +IG+I
Sbjct: 141 WPFQPYLVFDV---G-DGSEQRD--NDSYINVQEIKLVMEIIKLIKEKRKDISFRNIGII 194
Query: 707 TPYRQQVLKLNKALESLYMPDIKVGSVEQFQ-GQERQ 742
T Y+ Q + K LE + D K G ++ G+ RQ
Sbjct: 195 THYKAQKTMIQKDLEKEF--D-KKGLLQPIMMGESRQ 228
Score = 112 (44.5 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 24/75 (32%), Positives = 47/75 (62%)
Query: 729 KVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIG 788
+V +V+ FQG+++ IIV+ VR++ +GFL++ +R NV +TRA L I+G
Sbjct: 274 EVDTVDAFQGRQKDCIIVTCVRASAVQGS------IGFLASLQRLNVTITRAKYSLFILG 327
Query: 789 NPHIVSKDPYWHQLL 803
+ + ++ +W++L+
Sbjct: 328 HLRTLMENQHWYELI 342
>TAIR|locus:2135472 [details] [associations]
symbol:AT4G05540 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 GO:GO:0004386
KO:K10706 IPI:IPI00530269 RefSeq:NP_567301.2 UniGene:At.54170
ProteinModelPortal:F4JGH5 SMR:F4JGH5 PRIDE:F4JGH5
EnsemblPlants:AT4G05540.1 GeneID:825906 KEGG:ath:AT4G05540
OMA:WVIGNER Uniprot:F4JGH5
Length = 689
Score = 254 (94.5 bits), Expect = 3.8e-23, Sum P(2) = 3.8e-23
Identities = 92/292 (31%), Positives = 137/292 (46%)
Query: 512 IIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQ 571
II T A+ + AE G + +DEA Q E ES+ + V++ GD +Q
Sbjct: 412 IIFCTASGAAEMTAERA--GSIDMLVVDEAAQLKECESVAALQLQGLHHAVLI--GDELQ 467
Query: 572 LGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYE 631
L ++ S E +S ERL G++ ++ + YR HP I P+ FY
Sbjct: 468 LPAMVQSEVCEKAKFVRSLFERLDSL-----GHKKHLLNV--QYRMHPSISLFPNMEFYG 520
Query: 632 EELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDERE-GSNPSWFNRIEVSKVVEIIQ 690
++ + S T FL F F G + E G S N +E++ V EI+
Sbjct: 521 GKISDAEIVKES-TYQKRFLQGNMFGSFSFINVGLGKEEFGDGHSPKNMVEIAVVSEILT 579
Query: 691 KL--TSTGNLSEEDIGVITPYRQQVLKLNKALESLY--MPD----IKVGSVEQFQGQERQ 742
L S+ ++ +GVI+PY+ QV + + + Y + D + V SV+ FQG E
Sbjct: 580 NLLKVSSETKTKMSVGVISPYKAQVSAIQERIGDKYTSVSDNLFTLNVRSVDGFQGGEED 639
Query: 743 VIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVS 794
+II+STVRS N +GFLSN +R NVA+TRA L +IGN +S
Sbjct: 640 IIIISTVRSNCNGN-------IGFLSNRQRANVALTRARHCLWVIGNERTLS 684
Score = 98 (39.6 bits), Expect = 3.8e-23, Sum P(2) = 3.8e-23
Identities = 39/148 (26%), Positives = 64/148 (43%)
Query: 316 VEADEVHLKFASDFQLNHRDENLYNVQFTYNRVNMRRLYQATDAAQELDTEFLFPSESSG 375
+ DE + F S F L + N + +N L ++ A DTE S + G
Sbjct: 39 ISIDEQY-SFRSGFFLIYLTTNTRIWKALHNGDGNLSLIKSVLQANTADTEQSVSSRNWG 97
Query: 376 IRLIESNTLVPISCNLNEEQMCSIEKILGLKG----APPYLIYGPPGTGKTMTLVEAILQ 431
+++ + S NLN Q +I L + LI+GPPGTG T T+ +
Sbjct: 98 NHVLD----IIRSANLNSSQESAILACLETREIRDKTSVKLIWGPPGTGNTKTVATLLFA 153
Query: 432 LYATREDARLLVCAPSNSAADHLLEKIL 459
L + + +VC P+N+A + ++L
Sbjct: 154 LLSL--SCKTVVCTPTNTAVVAVASRLL 179
>ZFIN|ZDB-GENE-070424-144 [details] [associations]
symbol:si:ch211-183d5.1 "si:ch211-183d5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR026855 ZFIN:ZDB-GENE-070424-144
GO:GO:0004386 PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AL935128 IPI:IPI00492493 Ensembl:ENSDART00000144897
Uniprot:F1QAI5
Length = 517
Score = 276 (102.2 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 93/311 (29%), Positives = 144/311 (46%)
Query: 510 YRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDP 569
Y +++ T SA + E + F I +DE A+EPE+ +P+ S+ + +VL GD
Sbjct: 179 YDVVLCTCSSA--LKPELREVMDFRQILIDECAMATEPEAFIPLVSHNPQQ--IVLLGDH 234
Query: 570 MQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLF 629
Q+ P++ + GM KS ER + L YR H +I PS F
Sbjct: 235 QQIRPIVQCGHVKNKGMEKSLFERYMDL----------ANMLDTQYRMHAEICSFPSDEF 284
Query: 630 YEEELIACKDESISCTAYLNFLPNKEFPVLFFG-IQGCD------EREGSNPSWFNRIEV 682
Y+ +L + C LN +KE + FG I+G + +G+ S N E
Sbjct: 285 YDGKLKTGAERGPCCL--LN--KSKEPTAMLFGHIEGKEVSLVVSTEKGNENSMANTEEA 340
Query: 683 SKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQ 742
+ V + L +S E I ++TPY QV ++ LE + ++ V +V + QG E
Sbjct: 341 EQAVCVADLLIKQSGVSPEHIAILTPYNAQVSEIKMTLEKKNVRNVTVCTVMKSQGSEWP 400
Query: 743 VIIVSTVRSTIKHNDFD----RKHC------LGFLSNPRRFNVAVTRAISLLIIIGNPHI 792
+IVSTVRS +D R H LGF+++ + NVA+TRA L I+GN +
Sbjct: 401 YVIVSTVRSC-STSDIQAYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGNSDL 459
Query: 793 VSKDPYWHQLL 803
+ W +LL
Sbjct: 460 LRCCELWDRLL 470
Score = 68 (29.0 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 410 PY-LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEK---IL----GE 461
P+ +I GPPGTGKT+ + + Q + +D + P+++ D K IL
Sbjct: 16 PFTVIQGPPGTGKTVVGIHIVFQFFKKNKDF-MTSFKPNHTNPDGNPPKKPAILYCGPSN 74
Query: 462 KAVEVRENEIFRLNAPSRP 480
K+V++ ++ +L+ +P
Sbjct: 75 KSVDIVAEQLLKLSGVLKP 93
>TAIR|locus:2018536 [details] [associations]
symbol:AT1G65780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 GO:GO:0004386
KO:K10706 InterPro:IPR026852 PANTHER:PTHR10887:SF27 IPI:IPI00534309
RefSeq:NP_176754.1 UniGene:At.52386 ProteinModelPortal:F4IBK4
SMR:F4IBK4 PRIDE:F4IBK4 EnsemblPlants:AT1G65780.1 GeneID:842889
KEGG:ath:AT1G65780 Uniprot:F4IBK4
Length = 1065
Score = 266 (98.7 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 88/281 (31%), Positives = 140/281 (49%)
Query: 536 IFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLF 595
+ +DEA Q E ES +P+ + ++L GD QL ++ S+ A G G+S ERL
Sbjct: 567 LVIDEAAQLKECESSIPMQLPGLRH--LILVGDERQLPAMVESQIALEAGFGRSLFERLA 624
Query: 596 ECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLN-FLPNK 654
G++ Y+ + YR H I P+K Y ++++ ++ Y +LP +
Sbjct: 625 LL-----GHKKYMLNI--QYRMHCSISSFPNKELYGKKILDAP--TVRQRNYTKQYLPGE 675
Query: 655 EF-PVLFFGIQ-GCDER-EGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEE--DIGVITPY 709
+ P F I G +E EG S N +EV V II L ++ ++GVI+PY
Sbjct: 676 MYGPYSFINIAYGREEYGEGEGRSLKNNVEVVVVAAIIANLLQVSEKTKTRINVGVISPY 735
Query: 710 RQQVLKLNKALESLYMPD------IKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHC 763
+ QV+ + + ++ + D +++ +V+ FQG E +IIVSTVRS N R
Sbjct: 736 KAQVIAIQEKIQETSIGDAGGLFSLRIRTVDGFQGGEEDIIIVSTVRS----NGVGR--- 788
Query: 764 LGFLSNPRRFNVAVTRAISLLIIIGNPH-IVSKDPYWHQLL 803
+GFL N RR NV +TRA L I+GN +++ W L+
Sbjct: 789 VGFLGNRRRTNVLLTRARFCLWILGNEATLMNSKSVWRNLI 829
Score = 84 (34.6 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKIL 459
LI+GPPGTGKT T ++L R L C P+N + + ++L
Sbjct: 263 LIWGPPGTGKTKTT--SVLLFTLLNAKCRTLTCGPTNVSVLEVASRVL 308
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 299 (110.3 bits), Expect = 5.0e-22, Sum P(2) = 5.0e-22
Identities = 120/465 (25%), Positives = 217/465 (46%)
Query: 305 TSSAYQGFIHR--VEADEVHLKFASDF--QLNHRDENLYNVQFTYNRVNMRRLYQATDAA 360
TS+ QG +H+ + D ++ F LN ++ + N V R Q A+
Sbjct: 1099 TSNLMQGSLHQQSIVCDLLYSNPTHFFTKSLNSSTQSSIHYNKISNSVTFIRSIQEFKAS 1158
Query: 361 QELDTEFLFPSESSGI--RLIESNTLVPISCN--LNEEQMCSIEKILGLKGAPPYLIYGP 416
+ P ++ + ++++ + C LNE Q+ +I+ L G LI GP
Sbjct: 1159 PFIKNLIFNPGCNNNLNQKMMKFPPTLETICKEKLNESQLNAIKSSLVESGIT--LIQGP 1216
Query: 417 PGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLN- 475
PGTGKT T+ + L A + ++LVC PS+++ D + ++ L K + + +IF+ N
Sbjct: 1217 PGTGKTTTINYLLSVLLAIDKKFKILVCGPSHASVDEVAKRCL--KNLLNSDGQIFKPNM 1274
Query: 476 APSRPYEDVNADHIRFCFFDEQIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFSH 535
+ E ++ + + ++ + + + I+ ST + ++ + +FS
Sbjct: 1275 VRTGRKEKISPECQKISLKNKNSSR--RINLIKSASIVFSTLAGSG---SKAIFE-NFSP 1328
Query: 536 --IFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLER 593
+ +DE+ Q+SEP S++P+S K ++L GDP+QL P I+S++ G+ S ER
Sbjct: 1329 DIVLIDESTQSSEPTSIIPLSLGSVKK--LILVGDPVQLPPTIFSKQGADCGLKISLFER 1386
Query: 594 LFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPN 653
L + V L YR HP S+ FY L ++ SI F +
Sbjct: 1387 LAKSID--------VQFLNTQYRMHPVTSKFISEEFYNGTLKDGENVSIDSYNNCKFHFD 1438
Query: 654 KEF-PVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTST-GNLSEEDIGVITPYRQ 711
F P+ FF + +++ S N+ E+ KV +I++L + G+ITPY+
Sbjct: 1439 PSFGPMKFFDLPKSNQKV-IKKSIMNQDEIDKVFTLIKELIEKYPECKKLSFGIITPYKL 1497
Query: 712 QVLKLNKALESL--YMPDIKVGSVEQFQGQERQVIIVSTVRSTIK 754
Q+ ++ + L + +I V +++ QG E+ +II+S VRS K
Sbjct: 1498 QMNQIKEQLNRSEHHNLNISVSTIDGVQGSEKDIIIMSCVRSIEK 1542
Score = 291 (107.5 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 97/305 (31%), Positives = 156/305 (51%)
Query: 514 ISTYMSASLIYAEGVDRG------HFSH--IFLDEAGQASEPESMVPISSYCKKDTVVVL 565
I+ SAS++++ G +FS + +DE+ Q+SEP S++P+S K ++L
Sbjct: 1301 INLIKSASIVFSTLAGSGSKAIFENFSPDIVLIDESTQSSEPTSIIPLSLGSVKK--LIL 1358
Query: 566 AGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLP 625
GDP+QL P I+S++ G+ S ERL + V L YR HP
Sbjct: 1359 VGDPVQLPPTIFSKQGADCGLKISLFERLAKSID--------VQFLNTQYRMHPVTSKFI 1410
Query: 626 SKLFYEEELIACKD-ESISCTAYLN--FLPNKEF-PVLFFGIQGCDEREGSNPSWFNRIE 681
S+ FY L KD E++S +Y N F + F P+ FF + +++ S N+ E
Sbjct: 1411 SEEFYNGTL---KDGENVSIDSYNNCKFHFDPSFGPMKFFDLPKSNQKV-IKKSIMNQDE 1466
Query: 682 VSKVVEIIQKLTST-GNLSEEDIGVITPYRQQVLKLNKALESL--YMPDIKVGSVEQFQG 738
+ KV +I++L + G+ITPY+ Q+ ++ + L + +I V +++ QG
Sbjct: 1467 IDKVFTLIKELIEKYPECKKLSFGIITPYKLQMNQIKEQLNRSEHHNLNISVSTIDGVQG 1526
Query: 739 QERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPY 798
E+ +II+S VRS K +GFLS+ RR NVA+TRA L +IG +++KD
Sbjct: 1527 SEKDIIIMSCVRSIEKFG-------IGFLSDRRRINVALTRAKLGLYVIGTYKVLAKDNT 1579
Query: 799 WHQLL 803
W + L
Sbjct: 1580 WEKFL 1584
Score = 52 (23.4 bits), Expect = 5.0e-22, Sum P(2) = 5.0e-22
Identities = 31/127 (24%), Positives = 55/127 (43%)
Query: 24 FEDYKSECSYNPSEEDPVQISFPFPFIDGKPQSVSVGETAVDSITIKNTTR-EPV-EL-W 80
F D KSE + N + DP + + QS + + + + R E V EL +
Sbjct: 854 FNDLKSELAKNKIKFDPRCLEKSKVTMIQDFQSKISPIIKIPNFQLNESERLETVLELLF 913
Query: 81 SKIYASTPENTFTL-SVMKPPSPGSDSGTNRGFVE----FFTLEERMIQPGQTLTIWLSC 135
+I+ T ++ S+ S +D+ N ++ + ++ I P +TL + LSC
Sbjct: 914 IEIHQLFKNETISVHSIGTKKSNNNDNNNNNTKIKADYIYSYVDVISISPDETLNLILSC 973
Query: 136 KPKGIGL 142
+P I L
Sbjct: 974 EPSKIPL 980
Score = 46 (21.3 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 231 ITD-GLTLKNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPS 289
+TD + SFF+ +I+E I ++ +R +++ + K + L +VP L PS
Sbjct: 629 VTDRNIASSIQNSFFR--IIVEFIHMENSIRLKKFKDINELFKDISLPKLVPLLPT--PS 684
Query: 290 L 290
L
Sbjct: 685 L 685
Score = 44 (20.5 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 344 TYNRVNMRRLYQATDAAQELDTEFLFPSESSGIRLIESNTLVPISCNLNEEQMCSIEKI 402
++NR+ M + D++ +L FL +G+ L S+ V N NE Q+ +E +
Sbjct: 363 SFNRLEMFLSNKFKDSSIQLYGSFL-----TGLSLEGSDLDVNFKINQNENQVTHLEVV 416
>TAIR|locus:2166163 [details] [associations]
symbol:AT5G37140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00534313 RefSeq:NP_198530.1 UniGene:At.55175
ProteinModelPortal:F4K5W4 SMR:F4K5W4 PRIDE:F4K5W4
EnsemblPlants:AT5G37140.1 GeneID:833686 KEGG:ath:AT5G37140
OMA:TEAKYEH ArrayExpress:F4K5W4 Uniprot:F4K5W4
Length = 692
Score = 242 (90.2 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 94/303 (31%), Positives = 144/303 (47%)
Query: 531 GHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSY 590
G + +DEA Q E ES+ + + V++ GD +QL P + EA+ G+S
Sbjct: 383 GSVDLLVVDEAAQLKECESVAALQLSGLRHAVLI--GDELQL-PAMVHNEAK---FGRSL 436
Query: 591 LERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDES-ISCTAYLN 649
ERL G+ ++ + YR HP I P+K FY + KD + + + Y
Sbjct: 437 FERLVLL-----GHNKHLLNV--QYRMHPSISRFPNKEFYGGRI---KDAANVQESIYQK 486
Query: 650 -FLPNKEFPVLFFGIQGCDERE-GSNPSWFNRIEVSKVVEIIQKL--TSTGNLSEEDIGV 705
FL F F G E E G S N +EV+ + EII L S+ + +GV
Sbjct: 487 RFLQGNMFGSFSFINVGRGEEEFGDGHSPKNMVEVAVISEIISNLFKVSSERRIKMSVGV 546
Query: 706 ITPYRQQVLKLNKALESLYMP-----DIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDR 760
++PY+ QV + + + Y + V SV+ FQG E +II+STVRS N +
Sbjct: 547 VSPYKGQVRAIQERTTNKYSSLSGLFTLNVRSVDGFQGGEEDIIIISTVRS----NGNGK 602
Query: 761 KHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVS-KDPYWHQLLWYCSDNNSYQGCALPE 819
+GFL+N +R NVA+TRA L +IGN ++ W +L+ S++ + GC
Sbjct: 603 ---VGFLNNRQRANVALTRARHCLWVIGNETTLALSGSSWAKLI---SESRTL-GCFYDA 655
Query: 820 REE 822
+E
Sbjct: 656 ADE 658
Score = 97 (39.2 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 388 SCNLNEEQMCSIEKILGLKGA----PPYLIYGPPGTGKTMTLVEAILQLYATREDARLLV 443
S LN Q +I L ++ LI+GPPGTGKT T+ A L + + +V
Sbjct: 71 SAKLNSSQEAAILSCLKIRNCNHKHSVKLIWGPPGTGKTKTV--ATLLFCLLKLSCKTVV 128
Query: 444 CAPSNSAADHLLEKIL 459
CAP+N+A + ++L
Sbjct: 129 CAPTNTAIVEVTSRLL 144
>TAIR|locus:2166183 [details] [associations]
symbol:AT5G37160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00521499 RefSeq:NP_198532.1 UniGene:At.55177
ProteinModelPortal:F4K5W6 SMR:F4K5W6 PRIDE:F4K5W6
EnsemblPlants:AT5G37160.1 GeneID:833689 KEGG:ath:AT5G37160
OMA:WAELISE Uniprot:F4K5W6
Length = 871
Score = 244 (91.0 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 96/319 (30%), Positives = 150/319 (47%)
Query: 512 IIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPIS--SYCKKDTVVVLAGDP 569
II T S + I + G + +DE Q E ES+ + C +L GD
Sbjct: 541 IIFCTASSVANINPARI--GSVDLLVVDETAQLKECESVAALQLPGLCH----ALLIGDE 594
Query: 570 MQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLF 629
QL ++++ E + G+S ERL G+ ++ + YR HP I P+K F
Sbjct: 595 YQLPAMVHNEECDKAKFGRSLFERLVLI-----GHSKHLLNV--QYRMHPSISRFPNKEF 647
Query: 630 YEEELI--ACKDESISCTAYLNFLPNKEFPVLFFGIQGCDE-REGSNPSWFNRIEVSKVV 686
Y + A ESI +L F + G +G +E +G +P N +EV+ +
Sbjct: 648 YGGRITDAANVQESIYEKRFLQGNMFGTFSFINVG-RGKEEFGDGHSPK--NMVEVAVIS 704
Query: 687 EIIQKL--TSTGNLSEEDIGVITPYRQQVLKLNKALESLY-------MPDIKVGSVEQFQ 737
+II L S+ + +GVI+PY+ QV + + + Y + + V SV+ FQ
Sbjct: 705 KIISNLFKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKYNSLSVDQLFTLNVQSVDGFQ 764
Query: 738 GQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVS-KD 796
G E VII+STVR + N +GFLSN +R NVA+TRA L +IGN ++
Sbjct: 765 GGEVDVIIISTVRCNVNGN-------VGFLSNRQRANVALTRARHCLWVIGNGTTLALSG 817
Query: 797 PYWHQLLWYCSDNNSYQGC 815
W +L+ S++ + +GC
Sbjct: 818 SIWAELI---SESRT-RGC 832
Score = 98 (39.6 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 51/211 (24%), Positives = 87/211 (41%)
Query: 261 AYDMENVTLMRKGLYLSLVVPGLAERRPSLVNGD-----FIFAKHAYEDTSSAYQGFIHR 315
A D + + G ++L L E RP + + D ++F+ Y D+ + F
Sbjct: 112 ADDKNEIYEPKCGDIIALSPLSLTEERPRIDDLDPLLLGYVFS--VYGDSKISVH-FSRS 168
Query: 316 VEADEVHLKFASDFQLN-HRDENLYNVQFTYNRVNMRRLYQATDAAQELDTEFLFPSESS 374
+ E H F +N + ++N + L Q+ TE F E+
Sbjct: 169 ISQSEKHTFCTGVFLINITTNTRIWNA--LHKDAADSTLIQSVLQEDASATEQCFSCEND 226
Query: 375 GIRLIESNTLVPI--SCNLNEEQMCSIEKILGLKGAPPY----LIYGPPGTGKTMTLVEA 428
+ +S+ +V I S LN Q +I L + LI+GPPGTGKT T+
Sbjct: 227 -VDGSDSDRVVDIIRSAKLNSSQEAAILGFLKTRNCKHKESVKLIWGPPGTGKTKTVATL 285
Query: 429 ILQLYATREDARLLVCAPSNSAADHLLEKIL 459
+ L + + +VCAP+N+ + ++L
Sbjct: 286 LSTLMQLK--CKTVVCAPTNTTIVAVASRLL 314
Score = 44 (20.5 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 424 TLVEAILQLYATREDARLLVCAPSNSAADHLLEK 457
T+V +L + ++ +VCAP+NSA ++ +
Sbjct: 305 TIVAVASRLLSLSKET--IVCAPTNSAIAEVVSR 336
>FB|FBgn0030170 [details] [associations]
symbol:CG2990 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=ISS] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:AE014298 GO:GO:0006200
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
KO:K10742 GeneTree:ENSGT00550000074852 OMA:EHESLCH
FlyBase:FBgn0030170 EMBL:BT088860 RefSeq:NP_727386.1
UniGene:Dm.17561 SMR:Q8IRL9 STRING:Q8IRL9
EnsemblMetazoa:FBtr0071415 GeneID:31934 KEGG:dme:Dmel_CG2990
UCSC:CG2990-RB InParanoid:Q8IRL9 GenomeRNAi:31934 NextBio:776017
Uniprot:Q8IRL9
Length = 1100
Score = 183 (69.5 bits), Expect = 7.3e-21, Sum P(3) = 7.3e-21
Identities = 86/338 (25%), Positives = 147/338 (43%)
Query: 311 GFIHRVEADEVHLKFASDFQLNHRDENL----YNVQ-F-TYNRVNMRRLYQATDAAQELD 364
GFI +EA + L+ D + +E ++ Q F T+N N+ L + QEL
Sbjct: 548 GFIVSIEARRLDLRLERDLSQRYSEETFIIDKHDSQSFATFNFTNLGMLLSEGERFQELR 607
Query: 365 TEFLFPSESSGIRLIESNTLVP-ISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTM 423
+ +++ L LN ++ + L + LI G PGTGKT
Sbjct: 608 DIIVAKKPPEQHKVLPKIILTKGAPILLNLNKVQQNAALRALTTSSHLLIKGLPGTGKTQ 667
Query: 424 TLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYED 483
TLV + L+ + +L+ A ++SA D+L+ ++L +R R++ + E+
Sbjct: 668 TLVALVRLLHLLGKS--VLITAQTHSAVDNLIMRLLPFGLPMMRLGSGSRIH---KQLEE 722
Query: 484 VNADHI-RFCFFDEQIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAG 542
++ + + + C E++ K AL I+ T + + R F + +DEA
Sbjct: 723 ISEERLTKDCKTVEELEK-----ALGQPSIVGVTCLGCGHPLFQ---RRQFDYCIVDEAT 774
Query: 543 QASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCH 602
Q +P + P+ +C K VL GDP QL P++ S+EA G ++ +RL
Sbjct: 775 QVLQPTVLRPLI-HCSK---FVLVGDPEQLPPIVRSKEARQRGADETLFQRL-------- 822
Query: 603 GNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDE 640
+E L YR + I L ++L Y +L DE
Sbjct: 823 DSEKATAVLSLQYRMNKTITRLANELTYGGDLKCASDE 860
Score = 161 (61.7 bits), Expect = 7.3e-21, Sum P(3) = 7.3e-21
Identities = 43/131 (32%), Positives = 72/131 (54%)
Query: 678 NRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQ 737
N E V+ +++ L +G + IGVI PYR QV +L K L S D++ +V+QFQ
Sbjct: 944 NYCEAGIVMHLLRYLLKSGYEASR-IGVIAPYRAQV-ELFKKLASKLDTDLECNTVDQFQ 1001
Query: 738 GQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDP 797
G+++ +II S ++ +D +R L + RR VA+TRA + LI++G+ + +
Sbjct: 1002 GRDKNLIIYSCSKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCLEQYG 1061
Query: 798 YWHQLLWYCSD 808
+ QL + D
Sbjct: 1062 PFRQLFKHIPD 1072
Score = 43 (20.2 bits), Expect = 7.3e-21, Sum P(3) = 7.3e-21
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 39 DPVQISFPFPFIDGKPQSVSVGE 61
DP+ +SF ++ G+P SV + E
Sbjct: 243 DPI-VSFVAQYVKGEPPSVLLPE 264
Score = 39 (18.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 409 PPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEK 462
P +LI G TG +++LQ D+ V + LL+K+L +K
Sbjct: 148 PDFLISGTTVTGSLFCKRKSVLQERFRGLDSGNSVMV-IGTLVHELLQKVLRQK 200
>CGD|CAL0002159 [details] [associations]
symbol:DNA2 species:5476 "Candida albicans" [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA] [GO:0000733 "DNA strand renaturation"
evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0017108 "5'-flap endonuclease activity" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
CGD:CAL0002159 Pfam:PF08696 eggNOG:COG1112 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
InterPro:IPR022765 Pfam:PF01930 EMBL:AACQ01000161 EMBL:AACQ01000157
RefSeq:XP_712310.1 RefSeq:XP_712454.1 ProteinModelPortal:Q59RL2
STRING:Q59RL2 GeneID:3645932 GeneID:3646072 KEGG:cal:CaO19.1192
KEGG:cal:CaO19.8783 Uniprot:Q59RL2
Length = 1426
Score = 283 (104.7 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 126/461 (27%), Positives = 213/461 (46%)
Query: 385 VPISCNLNEEQMCSIEKILGLKGAPPY-LIYGPPGTGKTMTLVEAILQLYATREDARLLV 443
+P + N +Q+ +++K+ A Y LI G PGTGKT + + I L A R+ +L+
Sbjct: 961 IPDAETFNPDQIAALKKVFS---ADDYSLIVGMPGTGKTTVIAQLIKVLVAQRKS--VLL 1015
Query: 444 CAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPP 503
+ +NSA D++L K+ K +++ E R+ P R ++D+ D+I E FK
Sbjct: 1016 TSYTNSAVDNILLKL---KDLDI---EFLRIGYPQRVHKDIK-DYI-----PE--FK--- 1058
Query: 504 LAALVCYRIIISTYMSASLIYAEGVD--------RGHFSHIFLDEAGQASEPESMVPISS 555
++ Y ++TYM +I + R F + +DEA Q + P S+ P+
Sbjct: 1059 -DSITTYEQYVNTYMRPKVIATTCLSITDVCFNLRYSFDYCIVDEASQITLPVSLGPLR- 1116
Query: 556 YCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLER-LFECEPYCHGNENYVTKLVRN 614
+ KK V+ GD QL P++ + K L R LF H + V+ L
Sbjct: 1117 FAKK---FVMVGDHDQLQPLVTHPDKRV----KQELSRSLFSLLAKEHPDS--VSHLTYQ 1167
Query: 615 YRSHPQILHLPSKLFYEEELIACKDESISCTAY-------LN-FL-----PNKEF----- 656
YR + I+++ + L Y +L C E ++ + LN F+ P+ ++
Sbjct: 1168 YRMNSDIMNVCNTLIYNNKL-KCGSEQVAQNSLKIPHPEVLNSFIGEDVSPDSQWIHKIF 1226
Query: 657 ----PVLFFGIQGCDE-REGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQ 711
VLF E N E + +I+ L G + E++IGV++ YR
Sbjct: 1227 DEKNNVLFLDYDAVPAVEENVGEMVINTKEALLIQQIVNALVH-GGVKEDEIGVMSFYRA 1285
Query: 712 QVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPR 771
Q+ L K L +L D+++ + +Q+QG++++ II+S VRS +RK + R
Sbjct: 1286 QLSVLKKNLNNL--KDLEILTADQYQGRDKECIIISLVRSN------ERKFAGDLMKEYR 1337
Query: 772 RFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSY 812
R NVA TRA + LII+G+ +S + + Y + Y
Sbjct: 1338 RLNVATTRAKTKLIILGSRFTLSTNELTKTFIDYLENEKWY 1378
>SGD|S000000978 [details] [associations]
symbol:ECM32 "DNA dependent ATPase/DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0006449 "regulation of translational
termination" evidence=IMP] [GO:0005844 "polysome" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] SGD:S000000978 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 GO:GO:0003723 EMBL:BK006939 GO:GO:0005844
eggNOG:COG1112 GeneTree:ENSGT00700000104467 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 EMBL:U18922 GO:GO:0003724 PIR:S30862
RefSeq:NP_011103.1 ProteinModelPortal:P32644 SMR:P32644
DIP:DIP-5404N IntAct:P32644 MINT:MINT-499764 STRING:P32644
PaxDb:P32644 PeptideAtlas:P32644 EnsemblFungi:YER176W GeneID:856923
KEGG:sce:YER176W CYGD:YER176w HOGENOM:HOG000094475 OMA:KDTPRGT
OrthoDB:EOG4P8JS8 NextBio:983389 Genevestigator:P32644
GermOnline:YER176W GO:GO:0006449 Uniprot:P32644
Length = 1121
Score = 140 (54.3 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 728 IKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIII 787
+ V +V+ FQG E+ II S VR N+ + K +GFL + RR NVA+TRA LI++
Sbjct: 1036 LHVATVDSFQGHEKSFIIFSCVR-----NNTENK--IGFLRDKRRLNVALTRAKHGLIVV 1088
Query: 788 GNPHIVSK-DPYWHQLLWYCSD 808
GN +++ K DP W + Y +
Sbjct: 1089 GNKNVLRKGDPLWKDYITYLEE 1110
Score = 136 (52.9 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 57/184 (30%), Positives = 81/184 (44%)
Query: 536 IFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLF 595
+ +DEA Q+SE ++VP+S ++ V V GD QL + ET S ER+
Sbjct: 817 VIMDEATQSSEASTLVPLSLPGIRNFVFV--GDEKQLSSFSNIPQLET-----SLFERVL 869
Query: 596 ECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKE 655
+G L YR HP+I P K Y EL KD T P +
Sbjct: 870 S-----NGTYKNPLMLDTQYRMHPKISEFPIKKIYNGEL---KD---GVTDEQKAWPGVQ 918
Query: 656 FPVLFFGIQ-GCDEREGSNP------SWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITP 708
P+ F+ G + R S ++ N+ E ++V+IIQ L + E+IGVITP
Sbjct: 919 HPLFFYQCDLGPESRVRSTQRDIVGFTYENKHECVEIVKIIQILMLDKKVPLEEIGVITP 978
Query: 709 YRQQ 712
Y Q
Sbjct: 979 YSAQ 982
Score = 111 (44.1 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 382 NTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARL 441
N L S LN Q ++E +L ++ GPPGTGKT T+ E I+Q+ +
Sbjct: 640 NRLKFSSDKLNRSQKTAVEHVLNNSIT---ILQGPPGTGKTSTIEEIIIQVIERFHAFPI 696
Query: 442 LVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADH 488
L A SN A D++ EKI+ E +++ I R+ + + + + DH
Sbjct: 697 LCVAASNIAIDNIAEKIM-ENRPQIK---ILRILSKKKE-QQYSDDH 738
>UNIPROTKB|E1BMP7 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9913 "Bos taurus" [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
[GO:0043139 "5'-3' DNA helicase activity" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISS] [GO:0004518 "nuclease
activity" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0033567
"DNA replication, Okazaki fragment processing" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0000076 "DNA
replication checkpoint" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] [GO:0043504 "mitochondrial DNA repair" evidence=IEA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 GO:GO:0045740 GO:GO:0000729
GO:GO:0017108 GO:GO:0000076 GO:GO:0043137 EMBL:DAAA02061817
IPI:IPI00688022 NextBio:20878938 GO:GO:0005760 GO:GO:0043139
GO:GO:0043142 GO:GO:0033567 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 Uniprot:E1BMP7
Length = 1061
Score = 280 (103.6 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 130/483 (26%), Positives = 226/483 (46%)
Query: 349 NMRRLYQATDAAQEL-DT--EFLFP---SESSGIRLIES-NTLVPISCNLNEEQMCSIEK 401
N+ +L + T A+Q+L D +F P S S + E+ +T+ I LN+ Q +++K
Sbjct: 577 NLSKLMENTRASQKLRDLIIDFREPQFISYLSSVLPHEAKDTVACILKGLNKPQRQAMKK 636
Query: 402 ILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGE 461
+L K LI G PGTGKT T+ + LYA +L+ + ++SA D++L K+
Sbjct: 637 VLLSKDYT--LIVGMPGTGKTTTICTLVRILYAC--GFSVLLTSYTHSAVDNILLKLAKF 692
Query: 462 KAVEVRENEIFRLNAPSRPY--EDV-NADHIRFCFFDEQIFKCPPLAALVCYRIIISTYM 518
K +R +I +++ + + E++ + I+ E+++ + A C I +
Sbjct: 693 KIGFLRLGQIQKVHPDIQKFTEEEICRSKSIKSLALLEELYNSQLIVATTCMGINHPIF- 751
Query: 519 SASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYS 578
R F +DEA Q S+P + P+ + ++ VL GD QL P++ +
Sbjct: 752 ----------SRKTFDFCIVDEASQISQPVCLGPLF-FSRR---FVLVGDHQQLPPLVLN 797
Query: 579 REAETYGMGKSYLERLFECE--------PYCHGNE-----NYVT---KL-VRNYRSHPQI 621
REA GM +S +RL + + Y ++ N +T KL + + +
Sbjct: 798 REARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAV 857
Query: 622 LHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIE 681
++LP+ + EL D S + F PN PV F E + I
Sbjct: 858 INLPNFKDVKLELEFYADYSENPWLIAAFEPNN--PVCFLNTHKVPAPEQVEKGGVSNIM 915
Query: 682 VSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQER 741
+K+V + + DIG+I PYRQQ+ ++ L + ++V +V+++QG+++
Sbjct: 916 EAKLVVFLTSVFIKAGCKPSDIGIIAPYRQQLKVISDLLAQSSVGMVEVNTVDRYQGRDK 975
Query: 742 QVIIVSTVRSTIKHNDFDRKHCLG-FLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWH 800
+++VS VRS + LG L + RR NVA+TRA LI++G +S+ P
Sbjct: 976 SIVVVSFVRS-------NEDGTLGELLKDWRRLNVAITRAKHKLILLGCVPSLSRYPPLR 1028
Query: 801 QLL 803
+LL
Sbjct: 1029 KLL 1031
>UNIPROTKB|Q4S102 [details] [associations]
symbol:GSTENG00025786001 "Chromosome 5 SCAF14773, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] [GO:0005760 "gamma DNA polymerase complex"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0006284 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0017108 GO:GO:0043137 GO:GO:0043142 GO:GO:0006264
PANTHER:PTHR10887:SF14 HOVERGEN:HBG081456 EMBL:CAAE01014773
ProteinModelPortal:Q4S102 STRING:Q4S102 Uniprot:Q4S102
Length = 1043
Score = 290 (107.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 114/416 (27%), Positives = 194/416 (46%)
Query: 391 LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSA 450
LN+ Q +++K+L K LI G PGTGKT T+ + L+A +L+ + ++SA
Sbjct: 633 LNKPQKQAMKKVLLSKDYT--LIVGMPGTGKTTTICTLVRILHAC--GFSVLLTSYTHSA 688
Query: 451 ADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPPLAALVCY 510
D++L K+ + +R + +++ PY + +A + + L L
Sbjct: 689 VDNILLKLKRFRVGFLRLGQGQKVHPDILPYTEESARK-------KGVHTLSELEQLYNK 741
Query: 511 RIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPM 570
+++ T I R F +DEA Q S+P + P+ Y ++ VL GD
Sbjct: 742 ELVVGTTCLG--IRHPLFTRRRFDFCIVDEASQISQPVCVGPLF-YARR---FVLVGDHQ 795
Query: 571 QLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFY 630
QL P++ ++EA + GM +S +RL E H + V +L YR + QI+ L + L Y
Sbjct: 796 QLPPIVQNQEARSLGMDESLFKRL-EL----H--RDAVVQLNVQYRMNRQIMSLSNSLMY 848
Query: 631 EEELIACKDESISCTAYLNFLPN--KEF--------------PVLFFGIQGCDEREGSNP 674
E L + + + L LP+ E PV F E
Sbjct: 849 EGRLECGSERTATSLITLPLLPSVLPELGSLAWIQATLLPSNPVCFLDCSAVPALETVEQ 908
Query: 675 SWF-NRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSV 733
N E + + +++ L G DIGVI PYRQQ+ ++ L++ ++V +V
Sbjct: 909 GGISNHTEAALIHKLLLLLIKAG-CKPGDIGVIAPYRQQLRTISGLLQASAFTGVEVNTV 967
Query: 734 EQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGN 789
+++QG+++ +I++S VRST + L + RR NVA+TRA S L+++G+
Sbjct: 968 DRYQGRDKSLILLSFVRSTAEEGPLGE-----LLKDWRRLNVAITRAKSKLLMLGS 1018
Score = 41 (19.5 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 77 VELWSKIYAS-TPENTFTLSVMKPPSPGSDSGTNRGFVEFFTLEERMIQP 125
+E W+K Y S + LS+ + P D+ E +EE + P
Sbjct: 176 LEHWAKEYLSPSSPKAVRLSI-RAPGQCQDAAALLTITELVDIEENVWSP 224
>UNIPROTKB|K7DXW3 [details] [associations]
symbol:DNA2 "DNA replication nuclease DNA2" species:9913
"Bos taurus" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:DAAA02061817
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
Ensembl:ENSBTAT00000003395 Uniprot:K7DXW3
Length = 1137
Score = 280 (103.6 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 130/483 (26%), Positives = 226/483 (46%)
Query: 349 NMRRLYQATDAAQEL-DT--EFLFP---SESSGIRLIES-NTLVPISCNLNEEQMCSIEK 401
N+ +L + T A+Q+L D +F P S S + E+ +T+ I LN+ Q +++K
Sbjct: 653 NLSKLMENTRASQKLRDLIIDFREPQFISYLSSVLPHEAKDTVACILKGLNKPQRQAMKK 712
Query: 402 ILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGE 461
+L K LI G PGTGKT T+ + LYA +L+ + ++SA D++L K+
Sbjct: 713 VLLSKDYT--LIVGMPGTGKTTTICTLVRILYAC--GFSVLLTSYTHSAVDNILLKLAKF 768
Query: 462 KAVEVRENEIFRLNAPSRPY--EDV-NADHIRFCFFDEQIFKCPPLAALVCYRIIISTYM 518
K +R +I +++ + + E++ + I+ E+++ + A C I +
Sbjct: 769 KIGFLRLGQIQKVHPDIQKFTEEEICRSKSIKSLALLEELYNSQLIVATTCMGINHPIF- 827
Query: 519 SASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYS 578
R F +DEA Q S+P + P+ + ++ VL GD QL P++ +
Sbjct: 828 ----------SRKTFDFCIVDEASQISQPVCLGPLF-FSRR---FVLVGDHQQLPPLVLN 873
Query: 579 REAETYGMGKSYLERLFECE--------PYCHGNE-----NYVT---KL-VRNYRSHPQI 621
REA GM +S +RL + + Y ++ N +T KL + + +
Sbjct: 874 REARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAV 933
Query: 622 LHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIE 681
++LP+ + EL D S + F PN PV F E + I
Sbjct: 934 INLPNFKDVKLELEFYADYSENPWLIAAFEPNN--PVCFLNTHKVPAPEQVEKGGVSNIM 991
Query: 682 VSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQER 741
+K+V + + DIG+I PYRQQ+ ++ L + ++V +V+++QG+++
Sbjct: 992 EAKLVVFLTSVFIKAGCKPSDIGIIAPYRQQLKVISDLLAQSSVGMVEVNTVDRYQGRDK 1051
Query: 742 QVIIVSTVRSTIKHNDFDRKHCLG-FLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWH 800
+++VS VRS + LG L + RR NVA+TRA LI++G +S+ P
Sbjct: 1052 SIVVVSFVRS-------NEDGTLGELLKDWRRLNVAITRAKHKLILLGCVPSLSRYPPLR 1104
Query: 801 QLL 803
+LL
Sbjct: 1105 KLL 1107
>SGD|S000004422 [details] [associations]
symbol:SEN1 "Presumed helicase and subunit of the Nrd1
complex (Nrd1p-Nab3p-Sen1p)" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043144
"snoRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IMP;IDA] [GO:0031126 "snoRNA
3'-end processing" evidence=IMP] [GO:0006378 "mRNA polyadenylation"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA;IMP] [GO:0016180 "snRNA processing"
evidence=IEA;IMP] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0035649 "Nrd1 complex" evidence=IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
InterPro:IPR024714 SGD:S000004422 GO:GO:0005524 GO:GO:0005634
GO:GO:0019904 GO:GO:0006378 EMBL:BK006945 GO:GO:0008033
eggNOG:COG1112 EMBL:U20939 EMBL:U21094 GO:GO:0006364 GO:GO:0006369
GO:GO:0031126 GO:GO:0043141 KO:K00088 RefSeq:NP_013536.3
GeneID:851152 KEGG:sce:YLR432W GO:GO:0016180 KO:K10706
RefSeq:NP_013534.3 GeneID:851150 KEGG:sce:YLR430W GO:GO:0035649
GO:GO:0032575 InterPro:IPR024481 PANTHER:PTHR10887:SF164
Pfam:PF12726 EMBL:M74589 PIR:S53416 ProteinModelPortal:Q00416
SMR:Q00416 DIP:DIP-881N IntAct:Q00416 MINT:MINT-427565
STRING:Q00416 PaxDb:Q00416 PeptideAtlas:Q00416 EnsemblFungi:YLR430W
CYGD:YLR430w GeneTree:ENSGT00580000081652 HOGENOM:HOG000246755
OMA:SAIIPLR OrthoDB:EOG4MPMZ6 NextBio:967924 Genevestigator:Q00416
GermOnline:YLR430W Uniprot:Q00416
Length = 2231
Score = 272 (100.8 bits), Expect = 4.9e-20, Sum P(3) = 4.9e-20
Identities = 95/330 (28%), Positives = 152/330 (46%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLE 592
F + +DEA Q +E S++P+ Y K ++V GDP QL P + S A + +S
Sbjct: 1584 FDTVIIDEACQCTELSSIIPLR-YGGKRCIMV--GDPNQLPPTVLSGAASNFKYNQSLFV 1640
Query: 593 RLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLP 652
R+ + + Y+ + YR HP I PS FY+ L KD LN P
Sbjct: 1641 RMEK------NSSPYLLDV--QYRMHPSISKFPSSEFYQGRL---KDGP--GMDILNKRP 1687
Query: 653 NKEF----PVLFFGI-QGCDEREGSNPSWFNRIEVSKVVEIIQKL-TSTGNLSE--EDIG 704
+ P FF I G E+ S+ N E+ +E++ L N + IG
Sbjct: 1688 WHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIG 1747
Query: 705 VITPYRQQVLKLNKALESLY----MPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDR 760
+I+PYR+Q+ K+ K + I +++ FQGQE+++I++S VR+ D
Sbjct: 1748 IISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRAD------DT 1801
Query: 761 KHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPER 820
K +GFL + RR NVA+TRA + + ++G+ ++K W L+ D + C
Sbjct: 1802 KSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKDRS----CLAYAC 1857
Query: 821 EEFADEDPTAAECWNHEEEIP-QSFQEDNW 849
F D A+ + +P S QED++
Sbjct: 1858 SGFLDPRNNRAQSILRKFNVPVPSEQEDDY 1887
Score = 76 (31.8 bits), Expect = 4.9e-20, Sum P(3) = 4.9e-20
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 370 PSESSGIRLIESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAI 429
PS + E T V S LN Q +I + +G LI GPPGTGKT T++ I
Sbjct: 1315 PSPPVNVDAAEIET-VKKSYKLNTSQAEAIVNSVSKEGFS--LIQGPPGTGKTKTILGII 1371
Query: 430 LQLYATRE-DARLLVCAP--SNSA-ADHLLEK 457
+T+ + ++ P NS+ + LL+K
Sbjct: 1372 GYFLSTKNASSSNVIKVPLEKNSSNTEQLLKK 1403
Score = 54 (24.1 bits), Expect = 3.7e-17, Sum P(4) = 3.7e-17
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 440 RLLVCAPSNSAADHL 454
++L+CAPSN+A D +
Sbjct: 1405 KILICAPSNAAVDEI 1419
Score = 49 (22.3 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 53 KPQSVSVGETAVDSITIKNTTRE 75
KPQ V VG + V ++ IK+ T E
Sbjct: 1436 KPQLVRVGRSDVVNVAIKDLTLE 1458
Score = 40 (19.1 bits), Expect = 3.7e-17, Sum P(4) = 3.7e-17
Identities = 21/86 (24%), Positives = 39/86 (45%)
Query: 238 KNYTSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSL-VNGDFI 296
+N+ SF K L + EI + M+ +E +GL +V + + +PS VN D
Sbjct: 1266 RNH-SFSKFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVGQILQAKPSPPVNVDAA 1324
Query: 297 ---FAKHAYEDTSSAYQGFIHRVEAD 319
K +Y+ +S + ++ V +
Sbjct: 1325 EIETVKKSYKLNTSQAEAIVNSVSKE 1350
Score = 38 (18.4 bits), Expect = 4.9e-20, Sum P(3) = 4.9e-20
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 149 FDVEDRIERVVFLL 162
FDVE R+E ++ +L
Sbjct: 692 FDVEGRLEGILAIL 705
>UNIPROTKB|E1BQD2 [details] [associations]
symbol:C4H4orf21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AADN02009328
IPI:IPI00577016 Ensembl:ENSGALT00000019715 Uniprot:E1BQD2
Length = 913
Score = 271 (100.5 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 79/232 (34%), Positives = 129/232 (55%)
Query: 528 VDRGHFSHIFLDEAGQASEPESMVPISSY-CKKDTVVVLAGDPMQLGPVIYSREA-ETYG 585
+D F + LDE Q +EP S++PI+ + C+K +VL GDP QL P I E+ G
Sbjct: 616 LDTLKFPVVVLDECSQMTEPTSLLPIARFQCEK---LVLVGDPKQLPPTIQGSESIHEKG 672
Query: 586 MGKSYLERLFECEPYCHGNENYVTKLVRN-YRSHPQILHLPSKLFYEEELIACKDESISC 644
+ ++ +RL C G++ T L+R YR HP I + ++LFYE LI E
Sbjct: 673 LEQTLFDRL--C---LMGHK---TILLRTQYRCHPAISAIANELFYEGNLIDGVSEK-ER 723
Query: 645 TAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIG 704
+ L++LP + F+ + G ++ E N S++N EV V+ IQ L ++G + +G
Sbjct: 724 SPLLDWLPT----LCFYSVNGLEQIERDN-SFYNMAEVHFTVKFIQALIASG-IDGSAVG 777
Query: 705 VITPYRQQVLKLNKALESLY---MP--DIKVGSVEQFQGQERQVIIVSTVRS 751
VIT Y+ Q+ KL L S++ P ++V +V+ FQG E++++++S VR+
Sbjct: 778 VITFYKSQMYKLQNLLRSIHSEAFPVKAVQVSTVDAFQGAEKEIVVLSCVRT 829
Score = 240 (89.5 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 67/204 (32%), Positives = 115/204 (56%)
Query: 609 TKLVRN-YRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCD 667
T L+R YR HP I + ++LFYE LI E + L++LP + F+ + G +
Sbjct: 688 TILLRTQYRCHPAISAIANELFYEGNLIDGVSEK-ERSPLLDWLPT----LCFYSVNGLE 742
Query: 668 EREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLY--- 724
+ E N S++N EV V+ IQ L ++G + +GVIT Y+ Q+ KL L S++
Sbjct: 743 QIERDN-SFYNMAEVHFTVKFIQALIASG-IDGSAVGVITFYKSQMYKLQNLLRSIHSEA 800
Query: 725 --MPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAIS 782
+ ++V +V+ FQG E++++++S VR+ R+ GF + +R NVA+TRA
Sbjct: 801 FPVKAVQVSTVDAFQGAEKEIVVLSCVRT--------RQ--TGFTDSEKRMNVALTRAKR 850
Query: 783 LLIIIGNPHIVSKDPYWHQLLWYC 806
L+I+GN +SK+ + +++ +C
Sbjct: 851 HLLIVGNLACLSKNRLYERVINHC 874
Score = 51 (23.0 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 25/86 (29%), Positives = 41/86 (47%)
Query: 409 PPYLIYGPPGTGKTMTLVEAIL---QLYAT---REDA-----RLLVCAPSNSAADHLLEK 457
P +I+G G GK+ L IL QL+ + +E A +LL+ + +N A D +L
Sbjct: 466 PITIIHGVFGAGKSFLLSVVILFLVQLFESSEAKEGAELAPWKLLIASSTNVAVDRILLC 525
Query: 458 ILGEKAVE--VRENEIFRLNAPSRPY 481
+L + E +R I ++ PY
Sbjct: 526 LL-DLGFEDFIRVGSIRKITKAILPY 550
Score = 47 (21.6 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 540 EAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREA 581
E Q+ ES VP+ + + V+V+ + G + Y+ +A
Sbjct: 156 EDEQSESKESCVPVCDHMRPAKVLVVKKEGQNKGRLFYACDA 197
>UNIPROTKB|E2QSH2 [details] [associations]
symbol:E2QSH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
Ensembl:ENSCAFT00000021752 Uniprot:E2QSH2
Length = 1040
Score = 271 (100.5 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 130/487 (26%), Positives = 224/487 (45%)
Query: 349 NMRRLYQATDAAQEL-DT--EFLFPSESSGIRLI----ESNTLVPISCNLNEEQMCSIEK 401
N+ +L + T +Q+L D +F P S + + +T+ I LN+ Q +++K
Sbjct: 576 NLSKLMENTCVSQKLRDLIIDFREPQFISYLSSVLPYDAKDTVACILKGLNKPQRQAMKK 635
Query: 402 ILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGE 461
+L K LI G PGTGKT T+ + LY +L+ + ++SA D++L K+
Sbjct: 636 VLLSKDYT--LIVGMPGTGKTTTICTLVRILYTC--GFSVLLTSYTHSAVDNILLKLAKF 691
Query: 462 KAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPPLAALVC-------YRIII 514
K RL + ++D+ F +E+I + P+ +L +RI+
Sbjct: 692 KI------GFLRLGRTQKVHQDIQK------FTEEEICRSKPIKSLALLEELYNSHRIVA 739
Query: 515 STYMSASL-IYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLG 573
+T M + I++ R F +DEA Q S+P + P+ + ++ VL GD QL
Sbjct: 740 TTCMGINHPIFS----RKTFDFCIVDEASQISQPICLGPLF-FSQR---FVLVGDHQQLP 791
Query: 574 PVIYSREAETYGMGKSYLERLFECE--------PYCHGNE-----NYVT---KL-VRNYR 616
P++ +REA GM +S +RL + + Y ++ N +T KL + +
Sbjct: 792 PLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGSDK 851
Query: 617 SHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSW 676
+++LP+ + EL D S + F PN PV F E
Sbjct: 852 VANAVVNLPNLKDVKLELEFYADYSENPWMIGAFEPNN--PVCFLNTDKVPAPEQVEKGG 909
Query: 677 FNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQF 736
+ I +K++ + + DIG+I PYRQQ+ +N L + ++V +V+++
Sbjct: 910 VSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSSIRMVEVNTVDKY 969
Query: 737 QGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVSKD 796
QG+++ +I+VS VRS K L + RR NVA+TRA LI++G +++
Sbjct: 970 QGRDKSIILVSFVRSN-KDGPIGE-----LLKDWRRLNVAITRAKHKLILLGCVPSLNRY 1023
Query: 797 PYWHQLL 803
P +LL
Sbjct: 1024 PPLGKLL 1030
>RGD|1589127 [details] [associations]
symbol:LOC684558 "similar to regulator of nonsense transcripts
1" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0044530 "supraspliceosomal complex" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=IEA]
GO:GO:0006260 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 IPI:IPI00767398
PRIDE:F1LY19 Ensembl:ENSRNOT00000027268 Uniprot:F1LY19
Length = 391
Score = 257 (95.5 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 60/166 (36%), Positives = 94/166 (56%)
Query: 652 PNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQ 711
P + P+ F+ QG +E S S+ NR E + V +I KL G + IG+ITPY
Sbjct: 13 PQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAG-AKPDQIGIITPYEG 71
Query: 712 Q------VLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLG 765
Q ++ + +L + ++++ SV+ FQG+E+ II+S VR+ +H +G
Sbjct: 72 QRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRAN-EHQG------IG 124
Query: 766 FLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNS 811
FL++PRR NVA+TRA +II+GNP +SK P W+ LL Y + +
Sbjct: 125 FLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKA 170
>UNIPROTKB|F1PCI1 [details] [associations]
symbol:C4orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AAEX03016829
Ensembl:ENSCAFT00000018553 Uniprot:F1PCI1
Length = 1024
Score = 258 (95.9 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 77/226 (34%), Positives = 125/226 (55%)
Query: 533 FSHIFLDEAGQASEPESMVPISSY-CKKDTVVVLAGDPMQLGPVIYSREA-ETYGMGKSY 590
F + LDE Q +EP S++PI+ + C+K ++L GDP QL P I +A G+ ++
Sbjct: 724 FPVVVLDECSQITEPASLLPIARFECEK---LILVGDPKQLSPTIQGSDAAHENGLEQTL 780
Query: 591 LERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF 650
+RL C G++ + + YR HP I + + LFYE L+ E+ L +
Sbjct: 781 FDRL--C---LMGHKPVLLRT--QYRCHPAISDISNDLFYEGNLVDGISET-ERGPLLEW 832
Query: 651 LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYR 710
LP + F+ I+G ++ E N S+ N E + +++IQ L ++G ++ IGVIT Y+
Sbjct: 833 LPT----LCFYNIKGPEQIERDN-SFHNVAEAAFTLKLIQSLIASG-IAGSMIGVITLYK 886
Query: 711 QQVLKLNKALESLYM--PDIK---VGSVEQFQGQERQVIIVSTVRS 751
Q+ KL L ++ PDIK V +V+ FQG E+++II+S VR+
Sbjct: 887 SQMYKLCHLLSAVDFDNPDIKAVQVSTVDAFQGAEKEIIILSCVRT 932
Score = 233 (87.1 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 69/202 (34%), Positives = 114/202 (56%)
Query: 611 LVRN-YRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDER 669
L+R YR HP I + + LFYE L+ E+ L +LP + F+ I+G ++
Sbjct: 793 LLRTQYRCHPAISDISNDLFYEGNLVDGISET-ERGPLLEWLPT----LCFYNIKGPEQI 847
Query: 670 EGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYM--PD 727
E N S+ N E + +++IQ L ++G ++ IGVIT Y+ Q+ KL L ++ PD
Sbjct: 848 ERDN-SFHNVAEAAFTLKLIQSLIASG-IAGSMIGVITLYKSQMYKLCHLLSAVDFDNPD 905
Query: 728 IK---VGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLL 784
IK V +V+ FQG E+++II+S VR+ R+ +GF+ + +R NVA+TR L
Sbjct: 906 IKAVQVSTVDAFQGAEKEIIILSCVRT--------RQ--VGFIDSEKRMNVALTRGRRHL 955
Query: 785 IIIGNPHIVSKDPYWHQLLWYC 806
+I+GN + K+ W +++ +C
Sbjct: 956 LIVGNLACLRKNRLWGRVIQHC 977
Score = 61 (26.5 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 34/151 (22%), Positives = 66/151 (43%)
Query: 345 YNRVNMRRLYQATDAAQELDTEFLFPSESSGIRLIESNTLVPISCNLNEEQMCSIEKILG 404
++ +N + + +A +L +E + ++ + ++ L+ I+ + + K +
Sbjct: 508 FSNINTKFELLSLEATLQLASELI---QAHNLNKDQATALIQIAQMMASHENAEEVKKVQ 564
Query: 405 LKGAPPYLIYGPPGTGKTMTLVEAIL---QLYATRE-----DAR---LLVCAPSNSAADH 453
P +I+G G GK+ L IL QL+ E + R LL+ + +N A D
Sbjct: 565 THTLPITIIHGVFGAGKSYLLAVVILFFVQLFEKSEVLTVGNVRPWKLLISSSTNVAVDR 624
Query: 454 LLEKILG---EKAVEVRENEIFRLNAPSRPY 481
+L +L EK V V + ++ P PY
Sbjct: 625 VLLGLLSLGFEKFVRV--GSVRKIAKPILPY 653
>UNIPROTKB|E1BG37 [details] [associations]
symbol:E1BG37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 EMBL:DAAA02016483 IPI:IPI00912094
Ensembl:ENSBTAT00000017567 OMA:HKLGTNK Uniprot:E1BG37
Length = 933
Score = 251 (93.4 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 74/226 (32%), Positives = 126/226 (55%)
Query: 533 FSHIFLDEAGQASEPESMVPISSY-CKKDTVVVLAGDPMQLGPVIYSREA-ETYGMGKSY 590
F + LDE Q +EP S++PI+ + C+K ++L GDP QL P I +A G+ ++
Sbjct: 626 FPVVVLDECSQMTEPASLLPIARFECEK---LILVGDPKQLPPTIQGSDAAHENGLEQTL 682
Query: 591 LERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF 650
+RL C G++ + + YR HP I + + LFYE L+ E+ + L +
Sbjct: 683 FDRL--C---LMGHKPILLRT--QYRCHPTISAIANDLFYEGNLMNGISET-ERSPLLEW 734
Query: 651 LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYR 710
LP + F+ ++G ++ E N S+ N E + +++IQ L ++G ++ IGVIT Y+
Sbjct: 735 LPT----LCFYNVKGLEQIERGN-SFHNVAEAAFTLKLIQSLIASG-IAGSMIGVITLYK 788
Query: 711 QQVLKLNKALESLYM--PDIK---VGSVEQFQGQERQVIIVSTVRS 751
Q+ KL L ++ P++K V +V+ FQG E+++II+S VR+
Sbjct: 789 SQMYKLCHLLSAMDFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRT 834
Score = 228 (85.3 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 66/202 (32%), Positives = 115/202 (56%)
Query: 611 LVRN-YRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDER 669
L+R YR HP I + + LFYE L+ E+ + L +LP + F+ ++G ++
Sbjct: 695 LLRTQYRCHPTISAIANDLFYEGNLMNGISET-ERSPLLEWLPT----LCFYNVKGLEQI 749
Query: 670 EGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYM--PD 727
E N S+ N E + +++IQ L ++G ++ IGVIT Y+ Q+ KL L ++ P+
Sbjct: 750 ERGN-SFHNVAEAAFTLKLIQSLIASG-IAGSMIGVITLYKSQMYKLCHLLSAMDFDHPN 807
Query: 728 IK---VGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLL 784
+K V +V+ FQG E+++II+S VR+ R+ +GF+ + +R NVA+TR L
Sbjct: 808 LKAVQVSTVDAFQGAEKEIIILSCVRT--------RQ--VGFIDSEKRMNVALTRGRRHL 857
Query: 785 IIIGNPHIVSKDPYWHQLLWYC 806
+I+GN + K+ W +++ +C
Sbjct: 858 LIVGNLACLRKNRLWGRVIQHC 879
Score = 67 (28.6 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 37/151 (24%), Positives = 67/151 (44%)
Query: 345 YNRVNMRRLYQATDAAQELDTEFLFPSESSGIRLIESNTLVPISCNLNEEQMCSIEKILG 404
++ +N + + +A +L +E + + + ++ L+ I+ + Q K L
Sbjct: 410 FSNINTKFELLSIEATLKLASELI---QVHKLNKDQAAALIQIAQMMASRQSVEEAKELA 466
Query: 405 LKGAPPYLIYGPPGTGKTMTLVEAIL---QLYATRE-----DAR---LLVCAPSNSAADH 453
+ P +I+G G GK+ L IL QL+ E +AR LL+ + +N A D
Sbjct: 467 IHTLPITIIHGVFGAGKSYLLAVVILFFVQLFEKCEALTVGNARPWKLLISSSTNVAVDR 526
Query: 454 LLEKILG---EKAVEVRENEIFRLNAPSRPY 481
+L +L EK V V + ++ P PY
Sbjct: 527 VLLGLLSLGFEKFVRV--GSVRKIAKPVLPY 555
>WB|WBGene00016566 [details] [associations]
symbol:eri-7 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0019079 "viral
genome replication" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR003593 SMART:SM00382 GO:GO:0000166 GO:GO:0000003
GO:GO:0017111 InterPro:IPR014001 SMART:SM00487 EMBL:FO080509
GeneTree:ENSGT00700000104572 PIR:T28788 RefSeq:NP_491374.2
ProteinModelPortal:O01976 SMR:O01976 EnsemblMetazoa:C41D11.7
GeneID:172047 KEGG:cel:CELE_C41D11.7 UCSC:C41D11.7.1 CTD:172047
WormBase:C41D11.7 InParanoid:O01976 OMA:NDEEMIN NextBio:873807
ArrayExpress:O01976 Uniprot:O01976
Length = 625
Score = 141 (54.7 bits), Expect = 6.2e-19, Sum P(3) = 6.2e-19
Identities = 41/128 (32%), Positives = 67/128 (52%)
Query: 675 SWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESL-----YMPDIK 729
S+ N E + Q+L G + DI +ITPY+ Q + K +E Y ++
Sbjct: 389 SYANLAEAKIAIGHYQRLLKYG-VQPSDIAIITPYKGQTSLVTKLMEEFGAETGYTDFVQ 447
Query: 730 --VGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIII 787
+G+V+ QG+E +V+I + VRS RK +GF+S RR NV +TRA + I
Sbjct: 448 TTIGTVDSVQGKEYEVVIFTMVRSN------PRK-TMGFVSELRRLNVVITRAKRHFMFI 500
Query: 788 GNPHIVSK 795
GN +++++
Sbjct: 501 GNGYLLAE 508
Score = 118 (46.6 bits), Expect = 6.2e-19, Sum P(3) = 6.2e-19
Identities = 38/126 (30%), Positives = 66/126 (52%)
Query: 538 LDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFEC 597
+DEA Q E ++ + Y K +V+AGDP QL ++++ EA+ +G+ S ++R+ E
Sbjct: 237 IDEAAQVMEAQTWPAV--YKMKR--IVMAGDPKQLPALVFTDEAKAFGLQNSVMDRILEK 292
Query: 598 EPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEEL---IACKDESISCTAYLNFLPNK 654
+ N +++ L YRS+ +I + FY +L + C + S+ LN P K
Sbjct: 293 K----NNFSWIM-LENQYRSNAKIATWSNTCFYHNQLKTDVKCHEYSLH--TILNPQP-K 344
Query: 655 EFPVLF 660
+F LF
Sbjct: 345 KFRNLF 350
Score = 102 (41.0 bits), Expect = 6.2e-19, Sum P(3) = 6.2e-19
Identities = 35/125 (28%), Positives = 59/125 (47%)
Query: 363 LDTEFLFPSESSGIRLIESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKT 422
L++ P E + +E +P S NE+Q +I+ L + I GPPGTGKT
Sbjct: 41 LESHMTDPIELNSFDSMEKEAGIPFS---NEKQRTAIKMALN-ENRKLVCIQGPPGTGKT 96
Query: 423 MTLVEAILQLYATREDARLLVCAPSNSAADHL---LEKILGEKAVEVRENEIFRLNAPSR 479
TL + +L ++ +++V AP+ A ++ +K L ++V E+ + N
Sbjct: 97 FTLTLLLCRLIQQKK--QVVVLAPTREALANIRMMTKKTLKRMGIKVHEHALMDTNE--- 151
Query: 480 PYEDV 484
Y DV
Sbjct: 152 -YRDV 155
>CGD|CAL0001700 [details] [associations]
symbol:orf19.702 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006449 "regulation of translational termination"
evidence=IEA] InterPro:IPR003593 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00382 CGD:CAL0001700 GO:GO:0005524 GO:GO:0008270
GO:GO:0005622 GO:GO:0017111 eggNOG:COG1112 EMBL:AACQ01000183
EMBL:AACQ01000182 RefSeq:XP_711775.1 RefSeq:XP_711793.1
ProteinModelPortal:Q59PZ8 GeneID:3646609 GeneID:3646623
KEGG:cal:CaO19.702 KEGG:cal:CaO19.8321 Uniprot:Q59PZ8
Length = 1105
Score = 200 (75.5 bits), Expect = 8.9e-19, Sum P(3) = 8.9e-19
Identities = 97/356 (27%), Positives = 147/356 (41%)
Query: 390 NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
NLNE Q ++ +L ++ GPPGTGKT T+ E ILQL + +LV A SN
Sbjct: 639 NLNESQKKGVQSVLNNSIT---VLQGPPGTGKTSTIYEIILQLLDSLNTYPILVVAASNI 695
Query: 450 AADHLLEKIL---GEKAVEVRENEIFRLNAPSRPYEDVNADHIRFC--------FFDEQI 498
A D++ EK++ G+ + + E R S P + H + DE
Sbjct: 696 AIDNIAEKLMTKHGKDILRITAAEKERDYNRSHPLASICLHHKMYDAMPMKYQQVMDEMK 755
Query: 499 FKCPPLAALVCY------RIIISTYM--SASLIYAEGVDRGHFSH------IFLDEAGQA 544
P Y R +S + A ++ A V G + +DEA Q+
Sbjct: 756 RGMAPSIGTTAYKKYAQERFFLSNQIVTQAKVVLATPVVAGGIKSLNNVRVVIIDEATQS 815
Query: 545 SEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGN 604
SEP +++P++ + +VL GD QL +S + S ER+ +G
Sbjct: 816 SEPTTLIPLALPSVEK--LVLVGDQKQLS--CFSLIPN---LSLSLFERVL-----LNGT 863
Query: 605 ENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQ 664
L YR HP+I P FY L KD I A + P+ F+ +
Sbjct: 864 YKTPHMLDTQYRMHPEISEFPRTKFYGGLL---KD-GIDANARQSEGVISS-PLYFWDTK 918
Query: 665 G-CDE-------REGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ 712
G E RE ++ NR E+ + ++++ L T + E IG+ITPY Q
Sbjct: 919 GNAREQSVRNFLREDGGYTYTNRDEIGYIQQVLRTLIITKGVKPEQIGIITPYSGQ 974
Score = 120 (47.3 bits), Expect = 8.9e-19, Sum P(3) = 8.9e-19
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 728 IKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIII 787
I + S++ FQG+E+ +I+S VRS + K +GFL + RR NVA+TRA LI++
Sbjct: 1019 IMIASIDAFQGREKDYMIMSCVRS-------NTKGVIGFLRDERRLNVALTRAKYGLIMV 1071
Query: 788 GNPHIVSK-DPYWHQLLWY 805
G+ + D W + L Y
Sbjct: 1072 GDKKCLQNGDKLWKEYLQY 1090
Score = 46 (21.3 bits), Expect = 8.9e-19, Sum P(3) = 8.9e-19
Identities = 22/103 (21%), Positives = 49/103 (47%)
Query: 155 IERVVFLLAEDKISQS--LASKRPY-SRGGRKKQFSVDKYVVGSRPARYRGQIYQNRLPR 211
+++ +FL+ +D+I S +A+ S+ GR+ + V + ++ P + LPR
Sbjct: 531 VDQAIFLILDDEIMWSGYIATVDEIASKKGRRVKKDVIELIIMLHP-------WSQALPR 583
Query: 212 YDIPNHIRELIERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQ 254
++++ ++ Q + + + N SF + LL E I+
Sbjct: 584 TVHVSNLK-ILPASQPVSRVLNAMKTINNASFTRMLLGKEPIK 625
>ZFIN|ZDB-GENE-090313-71 [details] [associations]
symbol:dna2 "DNA replication helicase 2 homolog
(yeast)" species:7955 "Danio rerio" [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA;ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=ISS]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
ZFIN:ZDB-GENE-090313-71 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852 EMBL:BX530068
IPI:IPI00901582 Ensembl:ENSDART00000109798 ArrayExpress:F1Q892
Bgee:F1Q892 Uniprot:F1Q892
Length = 1378
Score = 279 (103.3 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 137/494 (27%), Positives = 223/494 (45%)
Query: 324 KFASD--FQLNHRDENLYNVQFTYNRVNMRRLYQAT-DAAQELDTEFLFPS--ES-SGIR 377
K++S+ F+L+ +DE + ++M T + +EL EF P +S S +
Sbjct: 871 KYSSNTVFRLD-QDEGAGGLSTHLGNLSMLMENTPTSERLRELIVEFRPPQFIDSLSSVL 929
Query: 378 LIESNTLVP-ISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATR 436
++ +V I LN+ Q +++K+L K LI G PGTGKT T+ + L+A
Sbjct: 930 PRDAKDIVSNILKGLNKPQKQAMKKVLLSKDYT--LIVGMPGTGKTTTICTLVRILHAC- 986
Query: 437 EDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDE 496
+L+ + ++SA D++L K+ K ++ RL P + + ++ C +
Sbjct: 987 -GFSVLLTSYTHSAVDNILLKL---KRFKIG---FLRLGRPQKVHHEILPFTEEACRA-K 1038
Query: 497 QIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSY 556
I L L +I++T + R F +DEA Q S+P + P+ Y
Sbjct: 1039 GIQTLEELEQLYSRELIVATTCMG--VKHPIFSRRRFDFCIVDEASQISQPVCIGPLF-Y 1095
Query: 557 CKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERL-FECEPYCHGNENY-VTKLVRN 614
++ VL GD QL P++ + EA + GM +S +RL + N Y + + +
Sbjct: 1096 AQR---FVLVGDHQQLPPIVQNAEARSLGMDESLFKRLEHHRDAVVQLNVQYRMNSAIMS 1152
Query: 615 ------YRSHPQ---------ILHLPSKLFYEEEL--IACKDESISCTAYLNFLPNKEFP 657
Y + +L LPS+ EEEL C+ + S PN P
Sbjct: 1153 LSNALMYEGRLECGSEKTANAVLQLPSRAQAEEELELYVCQPQ-YSAWVQAALEPNS--P 1209
Query: 658 VLFFGIQGCDEREGSNPSWF-NRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKL 716
V F E S N E V ++ L G DIGVI PYRQQ+ +
Sbjct: 1210 VCFLDTSEVPAPETVEKSGISNHTEAVLVQGLVTLLLKAG-CRACDIGVIAPYRQQLKVI 1268
Query: 717 NKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLG-FLSNPRRFNV 775
+ L+ ++V +V+++QG+++ VIIVS VRS + N LG L + RR NV
Sbjct: 1269 SSLLQGDAFKALEVNTVDKYQGRDKSVIIVSFVRSNAEGN-------LGELLQDWRRLNV 1321
Query: 776 AVTRAISLLIIIGN 789
A+TRA L+++G+
Sbjct: 1322 AITRAKHKLLMLGS 1335
Score = 43 (20.2 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 86 STPENTFTLSVMKPPSPGSDSGTNRGFVEFFTLEERMIQPGQTLT--IWLSCK-PKGIGL 142
S EN+ T +V G+ SGTN F + IQ G T +L+C K L
Sbjct: 236 SEKENSPTCNVKSEADMGAVSGTN-DF-DLVMSYSSWIQNGSTEEKGTFLNCPIAKKRPL 293
Query: 143 HTTVLQFDVEDRI 155
+T+ LQ V+++I
Sbjct: 294 NTSELQ--VKEQI 304
Score = 42 (19.8 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 196 RPARYRGQIYQNRLPRYDIPNHIRELI 222
R Y GQ+Y +L + D+ + E +
Sbjct: 506 RSPNYLGQMYSLKLTQADMRQEVEEYL 532
>MGI|MGI:2443732 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10090 "Mus musculus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006260 "DNA
replication" evidence=ISO] [GO:0006264 "mitochondrial DNA
replication" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISO] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0032508 "DNA
duplex unwinding" evidence=ISO] [GO:0033567 "DNA replication,
Okazaki fragment processing" evidence=ISO] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=ISO] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISO] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISO]
[GO:0043504 "mitochondrial DNA repair" evidence=ISO] [GO:0045740
"positive regulation of DNA replication" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
MGI:MGI:2443732 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0005760 GO:GO:0043139 GO:GO:0043142 GO:GO:0043504
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:AK129051 EMBL:AK028381
EMBL:BC025182 EMBL:BC115716 IPI:IPI00224915 IPI:IPI00816966
RefSeq:NP_796346.2 UniGene:Mm.21492 ProteinModelPortal:Q6ZQJ5
SMR:Q6ZQJ5 STRING:Q6ZQJ5 PaxDb:Q6ZQJ5 PRIDE:Q6ZQJ5
Ensembl:ENSMUST00000092462 Ensembl:ENSMUST00000131422 GeneID:327762
KEGG:mmu:327762 UCSC:uc007fji.2 UCSC:uc007fjj.2
GeneTree:ENSGT00550000074852 InParanoid:Q6ZQJ5 OMA:EHESLCH
ChiTaRS:DNA2 NextBio:397947 Bgee:Q6ZQJ5 CleanEx:MM_DNA2
Genevestigator:Q6ZQJ5 GermOnline:ENSMUSG00000036875 Uniprot:Q6ZQJ5
Length = 1062
Score = 262 (97.3 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 131/478 (27%), Positives = 219/478 (45%)
Query: 349 NMRRLYQATDAAQ---ELDTEFLFPSE----SSGIRLIESNTLVPISCNLNEEQMCSIEK 401
N+ +L ++TD ++ EL +F P SS + +T+ I LN+ Q ++++
Sbjct: 578 NLSKLMESTDPSKRLRELIIDFREPQFIAYLSSVLPHDAKDTVANILKGLNKPQRQAMKR 637
Query: 402 ILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGE 461
+L K LI G PGTGKT T+ + L A +L+ + ++SA D++L K+
Sbjct: 638 VLLSKDYT--LIVGMPGTGKTTTICALVRILSAC--GFSVLLTSYTHSAVDNILLKLAKF 693
Query: 462 KAVEVRENEIFRLNAPSRPY--EDV-NADHIRFCFFDEQIFKCPPLAALVCYRIIISTYM 518
K +R + +++ + + E++ + I E+++ P+ A C I +
Sbjct: 694 KVGFLRLGQSHKVHPDIQKFTEEEICRSRSIASLAHLEELYNSHPIVATTCMGINHPIF- 752
Query: 519 SASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYS 578
R F +DEA Q S+P + P+ + ++ VL GD QL P++ +
Sbjct: 753 ----------SRKTFDFCIVDEASQISQPVCLGPLF-FSRR---FVLVGDHQQLPPLVVN 798
Query: 579 REAETYGMGKSYLERLFECEP-YCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIA- 636
REA GM +S +RL E Y ++ R S L KL + +A
Sbjct: 799 REARALGMSESLFKRLERNESAVVQLTVQY--RMNRKIMSLSNKLTYAGKLECGSDRVAN 856
Query: 637 -------CKDESISCTAYLNFLPNKEFP-VLFFGIQGCDEREGSNPSWFNRIE---VSKV 685
KD +S Y ++ + VL C P+ ++E VS V
Sbjct: 857 AVLALPNLKDARLSLQLYADYSDSPWLAGVLEPDNPVCFLNTDKVPAP-EQVENGGVSNV 915
Query: 686 VE--IIQKLTST---GNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQE 740
E +I LTST S DIGVI PYRQQ+ ++ L + ++V +V+++QG++
Sbjct: 916 TEARLIVFLTSTFIKAGCSPSDIGVIAPYRQQLRIISDLLARSSVGMVEVNTVDKYQGRD 975
Query: 741 RQVIIVSTVRSTIKHNDFDRKHCLG-FLSNPRRFNVAVTRAISLLIIIGNPHIVSKDP 797
+ +I+VS VRS + LG L + RR NVA+TRA LI++G+ + + P
Sbjct: 976 KSLILVSFVRS-------NEDGTLGELLKDWRRLNVALTRAKHKLILLGSVSSLKRFP 1026
>UNIPROTKB|Q8QHA5 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8355 "Xenopus laevis" [GO:0000076
"DNA replication checkpoint" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006264
"mitochondrial DNA replication" evidence=ISS] [GO:0006284
"base-excision repair" evidence=ISS] [GO:0016890 "site-specific
endodeoxyribonuclease activity, specific for altered base"
evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] InterPro:IPR026851 InterPro:IPR014808
Pfam:PF08696 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0016890 GO:GO:0045740 GO:GO:0000729 GO:GO:0017108
GO:GO:0000076 GO:GO:0043137 GO:GO:0043139 GO:GO:0043142
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOVERGEN:HBG081456
KO:K10742 EMBL:AF474372 RefSeq:NP_001079231.1 UniGene:Xl.17390
ProteinModelPortal:Q8QHA5 GeneID:378492 KEGG:xla:378492
Xenbase:XB-GENE-5829000 Uniprot:Q8QHA5
Length = 1053
Score = 274 (101.5 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 152/539 (28%), Positives = 243/539 (45%)
Query: 319 DEVHLKFASD--FQLNHRDENLYNVQFTYNRVNMRRLYQATDAAQELDT---EFLFPS-- 371
D +K D F+L+H +E ++F N+ RL + + +++L +F P+
Sbjct: 549 DRSLVKLPEDLLFRLDH-EEGGGGLEFHLG--NLSRLMENSSVSEKLRKLIIDFSKPNFV 605
Query: 372 -ESSGIRLIESNTLVP-ISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAI 429
S I ++ +V I LN+ Q +++++L K LI G PGTGKT T+ +
Sbjct: 606 QHLSSILPPDAKDIVASILRGLNKPQKQAMKRVLLSKDYT--LIVGMPGTGKTTTICTLV 663
Query: 430 LQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHI 489
LYA +L+ + ++SA D++L K+ K +V RL + + DV
Sbjct: 664 RILYAC--GFSVLLTSYTHSAVDNILLKL---KKFQVG---FLRLGRTQKLHPDVQE--- 712
Query: 490 RFCFFDEQIFKCPPLAALVCYRIIISTYMSASLIYAEGVD-----RGHFSHIFLDEAGQA 544
F +E+I K + +L + ++ + GV+ R F +DEA Q
Sbjct: 713 ---FSEEEICKAKSIKSLSALEELYNSQPVVATT-CMGVNHPIFTRRRFDFCIVDEASQI 768
Query: 545 SEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERL-------FEC 597
S+P + P+ + + VL GD QL P++ S EA GM +S +RL +
Sbjct: 769 SQPICLGPLF-FADR---FVLVGDHQQLPPLVKSAEARELGMSESLFKRLERNQEAVVQL 824
Query: 598 EPYCHGNENYVT---KLV-------RNYRSHPQILHLP--SKLFYEEELIACKDESISCT 645
N + KLV + R ++ LP L E E + ES+
Sbjct: 825 TVQYRMNSKIMALSNKLVYEGRLECASDRVSNAVVQLPHIKTLLLELEFRESQ-ESMWIK 883
Query: 646 AYLNFLPNKEFPVLFFGIQGCD----EREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEE 701
L P+ PV F + E +G +W IE +K+V + KL
Sbjct: 884 DVLE--PSN--PVCFLNTEKIPALETEEKGGISNW---IE-AKLVFHLTKLYLKAGCRPS 935
Query: 702 DIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRK 761
DIG+I PYRQQ+ ++ SL ++V +V+++QG+++ VIIVS VRS I D K
Sbjct: 936 DIGIIAPYRQQLKMISNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNI-----DGK 990
Query: 762 HCLG-FLSNPRRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPE 819
LG L + RR NVA+TRA LI++G +++ QL+ C+ Q LPE
Sbjct: 991 --LGDLLKDWRRLNVALTRAKHKLIMLGCVPTLNRFDCLEQLI--CNLKTENQIYDLPE 1045
Score = 38 (18.4 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 199 RYRGQIYQNRLPRYDIPNHIRELI 222
+Y ++YQ +L + D+ I+E +
Sbjct: 197 KYLKEMYQLKLNQADVMGEIQEYL 220
>UNIPROTKB|Q6ZU11 [details] [associations]
symbol:Q6ZU11 "Uncharacterized protein FLJ44066"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0016021 GO:GO:0008270
eggNOG:COG1112 UniGene:Hs.713663 EMBL:AK126054 EMBL:AL137700
IPI:IPI00300207 IPI:IPI00880006 PIR:T46441 RefSeq:NP_060862.3
UniGene:Hs.380346 ProteinModelPortal:Q6ZU11 SMR:Q6ZU11
PhosphoSite:Q6ZU11 DMDM:74711848 PaxDb:Q6ZU11 PRIDE:Q6ZU11
GeneID:55345 KEGG:hsa:55345 CTD:55345 HPA:HPA030706
neXtProt:NX_Q6ZU11 PharmGKB:PA144596502 HOGENOM:HOG000155510
InParanoid:Q6ZU11 PhylomeDB:Q6ZU11 GenomeRNAi:55345 NextBio:59679
ArrayExpress:Q6ZU11 Bgee:Q6ZU11 Genevestigator:Q6ZU11
Uniprot:Q6ZU11
Length = 926
Score = 258 (95.9 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 76/226 (33%), Positives = 127/226 (56%)
Query: 533 FSHIFLDEAGQASEPESMVPISSY-CKKDTVVVLAGDPMQLGPVIYSREA-ETYGMGKSY 590
F + LDE Q +EP S++PI+ + C+K ++L GDP QL P I +A G+ ++
Sbjct: 625 FPVVVLDECSQITEPASLLPIARFECEK---LILVGDPKQLPPTIQGSDAAHENGLEQTL 681
Query: 591 LERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF 650
+RL C G++ + + YR HP I + + LFY+ L+ E I + L +
Sbjct: 682 FDRL--C---LMGHKPILLRT--QYRCHPAISAIANDLFYKGALMNGVTE-IERSPLLEW 733
Query: 651 LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYR 710
LP + F+ ++G ++ E N S+ N E + +++IQ L ++G ++ IGVIT Y+
Sbjct: 734 LPT----LCFYNVKGLEQIERDN-SFHNVAEATFTLKLIQSLIASG-IAGSMIGVITLYK 787
Query: 711 QQVLKLNKALESL--YMPDIK---VGSVEQFQGQERQVIIVSTVRS 751
Q+ KL L ++ + PDIK V +V+ FQG E+++II+S VR+
Sbjct: 788 SQMYKLCHLLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRT 833
Score = 236 (88.1 bits), Expect = 5.2e-16, Sum P(3) = 5.2e-16
Identities = 68/202 (33%), Positives = 116/202 (57%)
Query: 611 LVRN-YRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDER 669
L+R YR HP I + + LFY+ L+ E I + L +LP + F+ ++G ++
Sbjct: 694 LLRTQYRCHPAISAIANDLFYKGALMNGVTE-IERSPLLEWLPT----LCFYNVKGLEQI 748
Query: 670 EGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESL--YMPD 727
E N S+ N E + +++IQ L ++G ++ IGVIT Y+ Q+ KL L ++ + PD
Sbjct: 749 ERDN-SFHNVAEATFTLKLIQSLIASG-IAGSMIGVITLYKSQMYKLCHLLSAVDFHHPD 806
Query: 728 IK---VGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLL 784
IK V +V+ FQG E+++II+S VR+ R+ +GF+ + +R NVA+TR L
Sbjct: 807 IKTVQVSTVDAFQGAEKEIIILSCVRT--------RQ--VGFIDSEKRMNVALTRGKRHL 856
Query: 785 IIIGNPHIVSKDPYWHQLLWYC 806
+I+GN + K+ W +++ +C
Sbjct: 857 LIVGNLACLRKNQLWGRVIQHC 878
Score = 57 (25.1 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 398 SIEKILGLKGA--PPYLIYGPPGTGKTMTLVEAIL---QLYATRE-----DAR---LLVC 444
SIE++ L+ P +I+G G GK+ L IL QL+ E +AR LL+
Sbjct: 457 SIEEVKELQTHTFPITIIHGVFGAGKSYLLAVVILFFVQLFEKSEAPTIGNARPWKLLIS 516
Query: 445 APSNSAADHLLEKILGEKAVE-VRENEIFRLNAPSRPY 481
+ +N A D +L +L +R + ++ P PY
Sbjct: 517 SSTNVAVDRVLLGLLSLGFENFIRVGSVRKIAKPILPY 554
Score = 41 (19.5 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 13/63 (20%), Positives = 26/63 (41%)
Query: 302 YEDTSSAYQGFIHRVEADEVHLKFASDFQLNHRDENLYNVQFTYNRVNMRRL-YQATDAA 360
+ DTS ++ D VHL+ R + ++ Q + +R + L + T
Sbjct: 3 FRDTSERQSDAVNESSLDSVHLQMIKGMLYQQRQD--FSSQDSVSRKKVLSLNLKQTSKT 60
Query: 361 QEL 363
+E+
Sbjct: 61 EEI 63
Score = 37 (18.1 bits), Expect = 5.5e-18, Sum P(3) = 5.5e-18
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 219 RELIERKQIPDAITDGLTLKNYTSFFKTLLIMEEI 253
+ + +RK IP A T+ T S TL + E+
Sbjct: 397 KRVSKRKFIPPAFTNVSTKFELLSLGATLKLASEL 431
>UNIPROTKB|H0Y455 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 EMBL:AL136233 HGNC:HGNC:2939
ProteinModelPortal:H0Y455 PRIDE:H0Y455 Ensembl:ENST00000440722
Bgee:H0Y455 Uniprot:H0Y455
Length = 375
Score = 244 (91.0 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 91/282 (32%), Positives = 145/282 (51%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLE 592
F +DEA Q S+P + P+ + ++ VL GD QL P++ +REA GM +S +
Sbjct: 78 FDFCIVDEASQISQPICLGPLF-FSRR---FVLVGDHQQLPPLVLNREARALGMSESLFK 133
Query: 593 RLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLP 652
RL + N++ V +L YR + +I+ L +KL YE +L C + ++ A +N
Sbjct: 134 RLEQ-------NKSAVVQLTVQYRMNSKIMSLSNKLTYEGKL-ECGSDKVA-NAVINLRH 184
Query: 653 NKEFPV-LFFGIQGCDER------EGSNPSWF---------NRIE---VSKVVE--IIQK 691
K+ + L F D E +NP F ++E VS V E +I
Sbjct: 185 FKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVF 244
Query: 692 LTST---GNLSEEDIGVITPYRQQVLKLNKAL-ESLYMPDIKVGSVEQFQGQERQVIIVS 747
LTS S DIG+I PYRQQ+ +N L S+ M ++V +V+++QG+++ +++VS
Sbjct: 245 LTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSIGM--VEVNTVDKYQGRDKSIVLVS 302
Query: 748 TVRSTIKHNDFDRKHCLG-FLSNPRRFNVAVTRAISLLIIIG 788
VRS ++ +G L + RR NVA+TRA LI++G
Sbjct: 303 FVRS-------NKDGTVGELLKDWRRLNVAITRAKHKLILLG 337
>UNIPROTKB|G5EA02 [details] [associations]
symbol:C4orf21 "Uncharacterized protein C4orf21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
EMBL:CH471057 InterPro:IPR018838 Pfam:PF10382 UniGene:Hs.713663
RefSeq:NP_060862.3 UniGene:Hs.380346 GeneID:55345 KEGG:hsa:55345
CTD:55345 GenomeRNAi:55345 NextBio:59679 EMBL:AC106864
EMBL:AC023886 PRIDE:G5EA02 Ensembl:ENST00000505019 HGNC:HGNC:25654
OMA:NTYESSG ArrayExpress:G5EA02 Bgee:G5EA02 Uniprot:G5EA02
Length = 2104
Score = 258 (95.9 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 76/226 (33%), Positives = 127/226 (56%)
Query: 533 FSHIFLDEAGQASEPESMVPISSY-CKKDTVVVLAGDPMQLGPVIYSREA-ETYGMGKSY 590
F + LDE Q +EP S++PI+ + C+K ++L GDP QL P I +A G+ ++
Sbjct: 1803 FPVVVLDECSQITEPASLLPIARFECEK---LILVGDPKQLPPTIQGSDAAHENGLEQTL 1859
Query: 591 LERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNF 650
+RL C G++ + + YR HP I + + LFY+ L+ E I + L +
Sbjct: 1860 FDRL--C---LMGHKPILLRT--QYRCHPAISAIANDLFYKGALMNGVTE-IERSPLLEW 1911
Query: 651 LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYR 710
LP + F+ ++G ++ E N S+ N E + +++IQ L ++G ++ IGVIT Y+
Sbjct: 1912 LPT----LCFYNVKGLEQIERDN-SFHNVAEATFTLKLIQSLIASG-IAGSMIGVITLYK 1965
Query: 711 QQVLKLNKALESL--YMPDIK---VGSVEQFQGQERQVIIVSTVRS 751
Q+ KL L ++ + PDIK V +V+ FQG E+++II+S VR+
Sbjct: 1966 SQMYKLCHLLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRT 2011
Score = 236 (88.1 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 68/202 (33%), Positives = 116/202 (57%)
Query: 611 LVRN-YRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDER 669
L+R YR HP I + + LFY+ L+ E I + L +LP + F+ ++G ++
Sbjct: 1872 LLRTQYRCHPAISAIANDLFYKGALMNGVTE-IERSPLLEWLPT----LCFYNVKGLEQI 1926
Query: 670 EGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESL--YMPD 727
E N S+ N E + +++IQ L ++G ++ IGVIT Y+ Q+ KL L ++ + PD
Sbjct: 1927 ERDN-SFHNVAEATFTLKLIQSLIASG-IAGSMIGVITLYKSQMYKLCHLLSAVDFHHPD 1984
Query: 728 IK---VGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLL 784
IK V +V+ FQG E+++II+S VR+ R+ +GF+ + +R NVA+TR L
Sbjct: 1985 IKTVQVSTVDAFQGAEKEIIILSCVRT--------RQ--VGFIDSEKRMNVALTRGKRHL 2034
Query: 785 IIIGNPHIVSKDPYWHQLLWYC 806
+I+GN + K+ W +++ +C
Sbjct: 2035 LIVGNLACLRKNQLWGRVIQHC 2056
Score = 57 (25.1 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 398 SIEKILGLKGA--PPYLIYGPPGTGKTMTLVEAIL---QLYATRE-----DAR---LLVC 444
SIE++ L+ P +I+G G GK+ L IL QL+ E +AR LL+
Sbjct: 1635 SIEEVKELQTHTFPITIIHGVFGAGKSYLLAVVILFFVQLFEKSEAPTIGNARPWKLLIS 1694
Query: 445 APSNSAADHLLEKILGEKAVE-VRENEIFRLNAPSRPY 481
+ +N A D +L +L +R + ++ P PY
Sbjct: 1695 SSTNVAVDRVLLGLLSLGFENFIRVGSVRKIAKPILPY 1732
Score = 45 (20.9 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 327 SDFQLNHRDENLYNVQFTYNRVNMRRL 353
S F LN RDE+ + V+F+ + R L
Sbjct: 1007 STFSLNSRDED-FMVEFSETSLKARTL 1032
Score = 44 (20.5 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 18/90 (20%), Positives = 37/90 (41%)
Query: 277 SLVVPGLAERRPSLVNGDFIFAKHA--YEDTSSAYQGFIHRVEADEVHLKFASDFQLNHR 334
++ P ++R + +G F A + DTS ++ D VHL+ R
Sbjct: 1156 NVATPNRVDKR--ITDGFFAEAVSGMHFRDTSERQSDAVNESSLDSVHLQMIKGMLYQQR 1213
Query: 335 DENLYNVQFTYNRVNMRRL-YQATDAAQEL 363
+ ++ Q + +R + L + T +E+
Sbjct: 1214 QD--FSSQDSVSRKKVLSLNLKQTSKTEEI 1241
Score = 41 (19.5 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 9/43 (20%), Positives = 18/43 (41%)
Query: 552 PISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERL 594
P+ + C+K V+ + +P +S E+ G L +
Sbjct: 1098 PMLNLCEKSAVLSFSIEPEDQNETFFSEESREVNPGDVSLNNI 1140
Score = 37 (18.1 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 219 RELIERKQIPDAITDGLTLKNYTSFFKTLLIMEEI 253
+ + +RK IP A T+ T S TL + E+
Sbjct: 1575 KRVSKRKFIPPAFTNVSTKFELLSLGATLKLASEL 1609
>UNIPROTKB|F1PYQ4 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:AAEX03002775 EMBL:AAEX03002776
EMBL:AAEX03002777 Ensembl:ENSCAFT00000036654 Uniprot:F1PYQ4
Length = 997
Score = 250 (93.1 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 92/331 (27%), Positives = 154/331 (46%)
Query: 493 FFDEQIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEA--GQASEPESM 550
F +E+I + P+ +L + +++ + G++ FS D +AS+
Sbjct: 684 FTEEEICRSKPIKSLALLEELYNSHRIVATT-CMGINHPIFSRKTFDFCIVDEASQISQP 742
Query: 551 VPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTK 610
+ + V L GD QL P++ +REA GM +S +RL + N+N V +
Sbjct: 743 ICLGPLFFSQRFV-LVGDHQQLPPLVLNREARALGMSESLFKRLEQ-------NKNAVVQ 794
Query: 611 LVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDERE 670
L YR + +I+ L +KL Y+ +L C + ++ A +N LPN + L D E
Sbjct: 795 LTVQYRMNSKIMSLSNKLTYDGKL-ECGSDKVA-NAVVN-LPNLKDVKLELEFYA-DYSE 850
Query: 671 GSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKV 730
NP E + V + T DIG+I PYRQQ+ +N L + ++V
Sbjct: 851 --NPWMIGAFEPNNPVCFLN--TDKAGCKPSDIGIIAPYRQQLKIINDLLFHSSIRMVEV 906
Query: 731 GSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNP 790
+V+++QG+++ +I+VS VRS K L + RR NVA+TRA LI++G
Sbjct: 907 NTVDKYQGRDKSIILVSFVRSN-KDGPIGE-----LLKDWRRLNVAITRAKHKLILLGCV 960
Query: 791 HIVSKDPYWHQLLWYCSDNNSYQGCALPERE 821
+++ P +LL + + LP E
Sbjct: 961 PSLNRYPPLGKLLHHLNSEKKIMD--LPSEE 989
Score = 168 (64.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 73/261 (27%), Positives = 125/261 (47%)
Query: 349 NMRRLYQATDAAQEL-DT--EFLFPSESSGIRLI----ESNTLVPISCNLNEEQMCSIEK 401
N+ +L + T +Q+L D +F P S + + +T+ I LN+ Q +++K
Sbjct: 549 NLSKLMENTCVSQKLRDLIIDFREPQFISYLSSVLPYDAKDTVACILKGLNKPQRQAMKK 608
Query: 402 ILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGE 461
+L K LI G PGTGKT T+ + LY +L+ + ++SA D++L K+
Sbjct: 609 VLLSKDYT--LIVGMPGTGKTTTICTLVRILYTC--GFSVLLTSYTHSAVDNILLKLAKF 664
Query: 462 KAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPPLAALVC-------YRIII 514
K RL + ++D+ F +E+I + P+ +L +RI+
Sbjct: 665 KI------GFLRLGRTQKVHQDIQK------FTEEEICRSKPIKSLALLEELYNSHRIVA 712
Query: 515 STYMSASL-IYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLG 573
+T M + I++ R F +DEA Q S+P + P+ + ++ VL GD QL
Sbjct: 713 TTCMGINHPIFS----RKTFDFCIVDEASQISQPICLGPLF-FSQR---FVLVGDHQQLP 764
Query: 574 PVIYSREAETYGMGKSYLERL 594
P++ +REA GM +S +RL
Sbjct: 765 PLVLNREARALGMSESLFKRL 785
>FB|FBgn0035842 [details] [associations]
symbol:CG7504 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005875 EMBL:AE014296 GO:GO:0006200
GO:GO:0016887 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG1112
KO:K10706 GeneTree:ENSGT00580000081652 RefSeq:NP_001137907.1
UniGene:Dm.31993 ProteinModelPortal:B7Z0D7 SMR:B7Z0D7 STRING:B7Z0D7
PaxDb:B7Z0D7 EnsemblMetazoa:FBtr0273367 GeneID:38904
KEGG:dme:Dmel_CG7504 FlyBase:FBgn0035842 OMA:NRSKSCY
OrthoDB:EOG4DV42G GenomeRNAi:38904 NextBio:810939 Bgee:B7Z0D7
Uniprot:B7Z0D7
Length = 1676
Score = 198 (74.8 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 71/273 (26%), Positives = 123/273 (45%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLE 592
F +DEA Q +EP +++P+ T +VL GD QL V+ S++A +G+ S +
Sbjct: 1385 FDICIVDEATQCTEPWTLLPMRFGL---THMVLVGDMQQLPAVVLSKKAIDFGLSNSMFD 1441
Query: 593 RLFEC-EPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL 651
R+ + +Y + ++ Q P + + +D+ I+ F
Sbjct: 1442 RIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFY-EDQLINAECTARFA 1500
Query: 652 PNKEFPVLFFGIQ-GCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYR 710
+ P ++ CD N S N E V +++ ++ G+I+PY+
Sbjct: 1501 -SPLIPYCVINLKYTCDSNGAQNKSISNNEEARFVAKLLTEMDKHMPSKRFSYGLISPYQ 1559
Query: 711 QQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNP 770
Q L++ + S +M +I +V+ +QG E+ VII+S R+ + C GFL+N
Sbjct: 1560 NQCYALSQVIPS-HM-NITPQTVDSYQGLEKDVIIISNART---------RGC-GFLTNY 1607
Query: 771 RRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLL 803
+R NVA+TR L+I GN + W LL
Sbjct: 1608 QRLNVALTRPRRCLVICGNFEDLKSVEMWRNLL 1640
Score = 113 (44.8 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 412 LIYGPPGTGKTMTLVEAILQ-LY---ATREDARLLVCAPSNSAADHLLEKILGEKAVEVR 467
LI GPPGTGK+ + E LQ LY A D ++L+CA SN+A DH++ +LG + V
Sbjct: 1197 LIQGPPGTGKSRVISELCLQTLYGNAAKTLDRKILICAHSNTAVDHIVG-LLGS-VLRVM 1254
Query: 468 ENEIFRL 474
+ F L
Sbjct: 1255 NRDQFHL 1261
Score = 46 (21.3 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 54 PQSVSVGETAVDSITIKNTTREPVELWSKIYASTPEN 90
PQ + +T+ + T+R+ + SK P+N
Sbjct: 498 PQKIETNKTSTRKRFVSTTSRDELSTTSKEIKDAPKN 534
>POMBASE|SPBC16D10.04c [details] [associations]
symbol:dna2 "DNA replication endonuclease-helicase
Dna2" species:4896 "Schizosaccharomyces pombe" [GO:0000084 "S phase
of mitotic cell cycle" evidence=IC] [GO:0000723 "telomere
maintenance" evidence=IGI] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISO] [GO:0004518 "nuclease activity"
evidence=IMP] [GO:0004527 "exonuclease activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031860 "telomeric 3' overhang
formation" evidence=IMP] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IMP] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0071932 "replication fork reversal" evidence=IMP]
InterPro:IPR026851 PomBase:SPBC16D10.04c InterPro:IPR014808
Pfam:PF08696 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0051539
GO:GO:0043596 GO:GO:0004003 GO:GO:0004527 GO:GO:0000084
eggNOG:COG1112 GO:GO:0000784 GO:GO:0042162 GO:GO:0031573
GO:GO:0017108 GO:GO:0043137 GO:GO:0031860 GO:GO:0043142
PANTHER:PTHR10887:SF14 EMBL:AF144384 EMBL:AB028014 EMBL:AF075169
PIR:T39568 PIR:T47242 PIR:T51292 RefSeq:NP_596499.2 STRING:Q9URU2
GeneID:2540148 OrthoDB:EOG47H8Z4 NextBio:20801284 GO:GO:0071932
InterPro:IPR022765 Pfam:PF01930 Uniprot:Q9URU2
Length = 1397
Score = 251 (93.4 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 115/436 (26%), Positives = 204/436 (46%)
Query: 387 ISCNLNEEQMCSIEKILGLKGAPPY-LIYGPPGTGKTMTLVEAILQLYATREDARLLVCA 445
+ C LNE+Q+ +++K A Y LI G PGTGKT T+ I L A ++ ++L+ +
Sbjct: 929 LKC-LNEDQITALKKC---HAAEHYSLILGMPGTGKTTTISSLIRSLLAKKK--KILLTS 982
Query: 446 PSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPPLA 505
++ A D++L K+ G ++ I RL +P + + V FC + F LA
Sbjct: 983 FTHLAVDNILIKLKG------CDSTIVRLGSPHKIHPLVK----EFCLTEGTTFD--DLA 1030
Query: 506 ALVCYRIIISTYMSASL-IYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVV 564
+L + +SL +Y ++ F + +DEA Q P + P+ +K V
Sbjct: 1031 SLKHFYEDPQIVACSSLGVYHSIFNKRKFDYCIIDEASQIPLPICLGPLQ-LAEK---FV 1086
Query: 565 LAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRS-HPQILH 623
L GD QL P++ + G+ S + L E P ++ + S ++++
Sbjct: 1087 LVGDHYQLPPLVKNSRTSKDGLSLSLFKLLSEKHPEAVTTLRLQYRMNEDINSLSSELIY 1146
Query: 624 -----LPSKLFYEEELIACK----D---ESISCTAYLNFLPNKEFPVLFFG---IQGCDE 668
SK +++LI K D +S S ++N L N V+FF I G +
Sbjct: 1147 GGNLVCGSKTISQKKLILPKAHLSDGLPDSSSSLHWVNKLINPSHSVIFFNTDDILGVES 1206
Query: 669 REGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDI 728
+ +N N E + + + G + + IG+I+ Y+ QV L+K L+S +I
Sbjct: 1207 K--TNNILENHTEAFLIEQAVSSFLERG-VKQSSIGIISIYKSQVELLSKNLKSF--TEI 1261
Query: 729 KVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLG-FLSNPRRFNVAVTRAISLLIII 787
++ +V+++QG+++ +I++S VRS + K+ +G L + R NVA++RA I+
Sbjct: 1262 EINTVDRYQGRDKDIILISFVRS-------NSKNLVGELLRDWHRLNVALSRAKVKCIMF 1314
Query: 788 GNPHIVSKDPYWHQLL 803
G+ +S LL
Sbjct: 1315 GSLSTLSSSNIVSHLL 1330
Score = 53 (23.7 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 180 GGRKKQFSVDKYVVGSRPARYRGQIYQNRLPRYDIPNHIRELIERKQIP 228
G ++ +DK S A RG + + LP D P IR++I R + P
Sbjct: 870 GSNHTRYRIDKDEFSSGIASIRGTLMSSVLP--DAPLIIRDMIIRLKPP 916
>RGD|2322000 [details] [associations]
symbol:LOC100363957 "hypothetical protein LOC100363957"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 RGD:2322000
GO:GO:0008270 GeneTree:ENSGT00550000074391 IPI:IPI00777941
Ensembl:ENSRNOT00000014695 Uniprot:F1M404
Length = 919
Score = 251 (93.4 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 75/225 (33%), Positives = 122/225 (54%)
Query: 533 FSHIFLDEAGQASEPESMVPISSY-CKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYL 591
F + LDE Q +EP S++PI+ + C+K ++L GDP QL P I +A +G G
Sbjct: 620 FPVVVLDECSQMTEPASLLPIARFECEK---LILVGDPKQLPPTIQGSDA-AHGNGLE-- 673
Query: 592 ERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFL 651
+ LF+ C + +L YR HP I + + LFYE L+ E + L +L
Sbjct: 674 QTLFD--RLCLMGHKPI-QLRTQYRCHPVISAIANDLFYEGNLVNGISER-ERSPVLEWL 729
Query: 652 PNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQ 711
P + F+ + G ++ E N S+ N E + +++I+ L ++G L IGVIT Y+
Sbjct: 730 PT----LCFYNVTGTEQVEREN-SFVNVAEAAFTLKLIRSLIASG-LEGSMIGVITLYKS 783
Query: 712 QVLKLNKALESLYM--PDIK---VGSVEQFQGQERQVIIVSTVRS 751
Q+ K+ L ++ + PD+K V +V+ FQG E+++II+S VR+
Sbjct: 784 QMYKICSLLSAVDVDHPDVKAVEVSTVDAFQGAEKEIIILSCVRT 828
Score = 225 (84.3 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 65/202 (32%), Positives = 112/202 (55%)
Query: 610 KLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDER 669
+L YR HP I + + LFYE L+ E + L +LP + F+ + G ++
Sbjct: 689 QLRTQYRCHPVISAIANDLFYEGNLVNGISER-ERSPVLEWLPT----LCFYNVTGTEQV 743
Query: 670 EGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYM--PD 727
E N S+ N E + +++I+ L ++G L IGVIT Y+ Q+ K+ L ++ + PD
Sbjct: 744 EREN-SFVNVAEAAFTLKLIRSLIASG-LEGSMIGVITLYKSQMYKICSLLSAVDVDHPD 801
Query: 728 IK---VGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLL 784
+K V +V+ FQG E+++II+S VR+ R+ +GF+ + +R NVA+TR L
Sbjct: 802 VKAVEVSTVDAFQGAEKEIIILSCVRT--------RQ--VGFIDSEKRMNVALTRGRRHL 851
Query: 785 IIIGNPHIVSKDPYWHQLLWYC 806
+IIG+ + K+ W +++ +C
Sbjct: 852 LIIGSLSCLRKNQLWGRVIQHC 873
Score = 48 (22.0 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 25/87 (28%), Positives = 39/87 (44%)
Query: 409 PPYLIYGPPGTGKTMTLVEAILQLYATRE--DA---------RLLVCAPSNSAADHLLEK 457
P +I+G G GK+ L IL L E D+ +LL+ + +N A D +L
Sbjct: 465 PITVIHGVFGAGKSYLLAVVILFLVELFEKCDSEAVGRARPWKLLISSSTNVAVDRVLLG 524
Query: 458 ILG---EKAVEVRENEIFRLNAPSRPY 481
+L EK + V + ++ P PY
Sbjct: 525 LLSLGFEKFIRV--GSVRKIAKPVLPY 549
>SGD|S000001207 [details] [associations]
symbol:DNA2 "Tripartite DNA replication factor" species:4932
"Saccharomyces cerevisiae" [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IDA] [GO:0000723
"telomere maintenance" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006273 "lagging strand
elongation" evidence=IGI;IMP] [GO:0006281 "DNA repair"
evidence=IEA;IGI;IMP] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA;IDA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=IDA]
[GO:0000706 "meiotic DNA double-strand break processing"
evidence=IGI] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
SGD:S000001207 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 EMBL:BK006934
GO:GO:0001302 GO:GO:0051539 GO:GO:0004003 eggNOG:COG1112
GO:GO:0000784 EMBL:U00027 GO:GO:0000723 GO:GO:0000706 GO:GO:0000733
GO:GO:0017108 GO:GO:0000014 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OrthoDB:EOG47H8Z4 PIR:S48904
RefSeq:NP_012034.1 ProteinModelPortal:P38859 SMR:P38859
DIP:DIP-2324N IntAct:P38859 MINT:MINT-620090 STRING:P38859
EnsemblFungi:YHR164C GeneID:856569 KEGG:sce:YHR164C CYGD:YHR164c
HOGENOM:HOG000112234 OMA:GLARYNI NextBio:982411
Genevestigator:P38859 GermOnline:YHR164C GO:GO:0035861
GO:GO:0006273 Uniprot:P38859
Length = 1522
Score = 254 (94.5 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 119/483 (24%), Positives = 216/483 (44%)
Query: 341 VQFTYNRVNMRRLYQATDAAQELDTEFLFPSESSGIRLIESNTLVPISCN----LNEEQM 396
V R + R + +D E+ L + + R + ++P + LN Q
Sbjct: 998 VDIVDERSKLCRKTKRSDGGNEILRSLLVDNRAPKFRDANDDPVIPYKLSKDTTLNLNQK 1057
Query: 397 CSIEKILGLKGAPPY-LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLL 455
+I+K++ A Y LI G PGTGKT T++ I+++ + E R+L+ + ++SA D++L
Sbjct: 1058 EAIDKVMR---AEDYALILGMPGTGKT-TVIAEIIKILVS-EGKRVLLTSYTHSAVDNIL 1112
Query: 456 EKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPPLAALVCYRIIIS 515
K+ +R +++ ++ Y N ++ +++ + K + ++ +
Sbjct: 1113 IKLRNTNISIMRLGMKHKVHPDTQKYVP-NYASVKS--YNDYLSKINSTS------VVAT 1163
Query: 516 TYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPV 575
T + + I ++ F ++ LDEA Q S P ++ P+ Y + ++ GD QL P+
Sbjct: 1164 TCLGINDILFT-LNEKDFDYVILDEASQISMPVALGPLR-YGNR---FIMVGDHYQLPPL 1218
Query: 576 IYSREAETYGMGKSYLERLFECEP---------Y--CHGN----ENYV---TKL-VRNYR 616
+ + A G+ +S + E P Y C G+ N++ KL N
Sbjct: 1219 VKNDAARLGGLEESLFKTFCEKHPESVAELTLQYRMC-GDIVTLSNFLIYDNKLKCGNNE 1277
Query: 617 SHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDE--REGSNP 674
Q L LP E L ++ES + +L + V+F C + +
Sbjct: 1278 VFAQSLELPMP----EALSRYRNESANSKQWLEDILEPTRKVVFLNYDNCPDIIEQSEKD 1333
Query: 675 SWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVE 734
+ N E ++ ++ + +G + EDIGV+T YR Q+ L K +++ + +
Sbjct: 1334 NITNHGEAELTLQCVEGMLLSG-VPCEDIGVMTLYRAQLRLLKKIFNKNVYDGLEILTAD 1392
Query: 735 QFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHIVS 794
QFQG++++ II+S VR + N L RR NVA+TRA S LIIIG+ +
Sbjct: 1393 QFQGRDKKCIIISMVRRNSQLNGG------ALLKELRRVNVAMTRAKSKLIIIGSKSTIG 1446
Query: 795 KDP 797
P
Sbjct: 1447 SVP 1449
Score = 37 (18.1 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 56 SVSVGETAVDSITIKNTTREPVELWSKIY 84
S+S G I+I N +WS IY
Sbjct: 623 SIS-GTRRTQPISISNVIDIEENIWSPIY 650
>UNIPROTKB|F1NWZ8 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0000729 "DNA
double-strand break processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0005634 GO:GO:0006284 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0017108 GO:GO:0043137 GO:GO:0005760
GO:GO:0043142 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AADN02028013 GeneTree:ENSGT00550000074852 OMA:EHESLCH
IPI:IPI00584167 Ensembl:ENSGALT00000006429 ArrayExpress:F1NWZ8
Uniprot:F1NWZ8
Length = 1009
Score = 207 (77.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 89/381 (23%), Positives = 170/381 (44%)
Query: 390 NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
+LN+ Q +++++L + LI G PGTGKT T+ + L A +L+ + +++
Sbjct: 643 SLNKPQKQAMKQVLLSRDYT--LIVGMPGTGKTTTICALVRILSAC--GFSVLLTSFTHT 698
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPY--EDV-NADHIRFCFFDEQIFKCPPLAA 506
A D++L K+ K +R +++ R + E++ + I+ E+++ P+ A
Sbjct: 699 AVDNILLKLAKFKVGFLRLGRAQKVHPDIRKFTEEEICRSKSIKSVTDLEELYNSQPVVA 758
Query: 507 LVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLA 566
C I ++ F +DEA Q S+P + P+ +C K V+V
Sbjct: 759 TACMGINHPIFVQKQ-----------FDFCIVDEASQISQPICLGPL--FCSKRFVLV-- 803
Query: 567 GDPMQLGPVIYSREAETYGMGKSYLERLFECE--------PYCHGNE--NYVTKLVRNYR 616
GD QL P++ + EA GM +S +RL + + Y ++ + KLV +
Sbjct: 804 GDHQQLPPLVQNSEARDLGMSESLFKRLEQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGK 863
Query: 617 SHPQILHLPSKLFYEEELIACKDESISCT-AYLNFLPNKEFPVLFFGIQGCDEREGSNPS 675
+ + L K E + +L + + PV F + E +
Sbjct: 864 LECGSEKVSNATANLPNLKMLKLEFADASKTWLKEVLEPDKPVCFLNTEKVPAPEHTEKG 923
Query: 676 WFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQ 735
+ +K+V + L DIG+I+PYR Q+ + + L ++V ++++
Sbjct: 924 GVCNVTEAKLVFFLTTLFIKAGCRPSDIGIISPYRHQLKVITDLMARLKENRVEVNTIDK 983
Query: 736 FQGQERQVIIVSTVRSTIKHN 756
+QG+++ +IIVS VR++ N
Sbjct: 984 YQGRDKSIIIVSFVRNSNDEN 1004
>ASPGD|ASPL0000069352 [details] [associations]
symbol:AN7246 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000641 InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 PRINTS:PR00819 SMART:SM00382
GO:GO:0005524 EMBL:BN001304 eggNOG:COG0464 GO:GO:0017111
EMBL:AACD01000123 RefSeq:XP_680515.1 ProteinModelPortal:Q5AWT4
EnsemblFungi:CADANIAT00000198 GeneID:2870136 KEGG:ani:AN7246.2
HOGENOM:HOG000168598 OMA:LDNQFRL OrthoDB:EOG4CJZR5 Uniprot:Q5AWT4
Length = 2310
Score = 175 (66.7 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 92/362 (25%), Positives = 161/362 (44%)
Query: 456 EKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPPLAALVCYRIIIS 515
EK+L E V V + I RL+ + +++ + R ++I C AA + ++ +
Sbjct: 681 EKLLEEHVVNV-QGLIARLDRCQKKLDEMWNERTRDVLLSKRIIGCTTTAAAINASVLNT 739
Query: 516 TYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPV 575
T + GV + L+EAG+ E + + S+ K+ +++ GD QL P
Sbjct: 740 T--------SPGV-------VLLEEAGEILESHVLTALGSHTKQ---LIMIGDHQQLRPK 781
Query: 576 I--YSREAET---YGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFY 630
I Y+ E Y + +S ERL E Y H L + +R P+I L +L Y
Sbjct: 782 INNYALSVEKGSGYDLNRSLFERLVE-SGYPHST------LAKQHRMAPEISALVRRLTY 834
Query: 631 EEELIACKDES-ISCTAYLN---FLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVV 686
+ L K ++ ++ N F+ + + G+ D +G S N EV V+
Sbjct: 835 PDLLDGDKTKTRLAPRGLQNRVVFIDHSQPEGFLHGVSDRDG-DGGKGSKQNTFEVKLVL 893
Query: 687 EIIQKLTSTGNLSEEDIGVITPY-------RQQVLK-LNKALESLYMPD-IKVGSVEQFQ 737
+I++ L G + + ++TPY R+++ K + L L D ++ G +
Sbjct: 894 KIVKYLGQQG-YGTDKLVILTPYLGQLHLLREELRKDTDPVLNDLDSYDLVRAGLISHAS 952
Query: 738 GQE-RQVIIVSTV------RSTIKHNDFDRKHC---LGFLSNPRRFNVAVTRAISLLIII 787
Q ++ I +ST+ S I R + +GF+S P+R NV ++RA +LI+I
Sbjct: 953 AQHVKRPIKLSTIDNYQGEESDIVIATLTRSNKDGDIGFMSAPQRLNVLLSRARDVLIMI 1012
Query: 788 GN 789
GN
Sbjct: 1013 GN 1014
Score = 88 (36.0 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 54/183 (29%), Positives = 82/183 (44%)
Query: 315 RVEADEVHLKFASDFQLNHRDENLYNVQ---FTYNRVNMRRLYQATDA--AQEL----DT 365
RV DE K S F+L + D V F Y + +R+L + + A+EL
Sbjct: 369 RVIGDEAVRKTLSYFKL-YDDIRFLLVDAPVFAYEPI-LRQLQEKIELPLAEELLGFQPV 426
Query: 366 EFLFPSESSGIRLIES-----NTLVPI-----SCNLNEEQMCSIEKILGLKGAPPYLIYG 415
+ + PS + +IES TL I +L+ QM S+ + GL LI G
Sbjct: 427 DVVAPSGTIPSTVIESLGDQERTLQDILGTEKPLSLDPSQMESL--LSGLTQRVS-LIQG 483
Query: 416 PPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLN 475
PPGTGK+ LY ++ L++C +N A D LE ++ + + E+ I RL
Sbjct: 484 PPGTGKSFVGALIAKALYKHSKETILVMCY-TNHALDQFLEDLMD---IGIDESAIVRLG 539
Query: 476 APS 478
+ S
Sbjct: 540 SKS 542
Score = 53 (23.7 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 821 EEFADEDPTAAECWNHEEEIPQS--FQEDNWNQ 851
EE +EDPTA N + +P+ +D W+Q
Sbjct: 2155 EEKKEEDPTALRSENCSDVVPRDDGVADDVWHQ 2187
>UNIPROTKB|Q5ZKG3 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0004518
"nuclease activity" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISS] [GO:0017108 "5'-flap endonuclease
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0006264 "mitochondrial DNA
replication" evidence=ISS] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISS] [GO:0005760
"gamma DNA polymerase complex" evidence=ISS] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AJ720121 EMBL:AADN02028013 IPI:IPI00596013
RefSeq:NP_001006497.1 UniGene:Gga.42409 STRING:Q5ZKG3 GeneID:423688
KEGG:gga:423688 CTD:1763 HOGENOM:HOG000168456 HOVERGEN:HBG081456
KO:K10742 NextBio:20826122 Uniprot:Q5ZKG3
Length = 992
Score = 200 (75.5 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 65/202 (32%), Positives = 105/202 (51%)
Query: 604 NENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGI 663
N+N V +L YR + +I+ L +KL YE +L C E +S A N LPN + L F
Sbjct: 785 NQNAVVQLTVQYRMNSKIMSLSNKLVYEGKL-ECGSEKVS-NATAN-LPNLKMLKLEFA- 840
Query: 664 QGCDEREGSNPSWFNRI-EVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALES 722
++ +W + E K V + T DIG+I+PYR Q+ + +
Sbjct: 841 -------DASKTWLKEVLEPDKPVCFLN--TEKAGCRPSDIGIISPYRHQLKVITDLMAR 891
Query: 723 LYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLG-FLSNPRRFNVAVTRAI 781
L ++V +++++QG+++ +IIVS VR++ ND + LG L + RR NVA+TRA
Sbjct: 892 LKENRVEVNTIDKYQGRDKSIIIVSFVRNS---NDEN----LGALLKDWRRLNVAITRAK 944
Query: 782 SLLIIIGNPHIVSKDPYWHQLL 803
LI++G + + P +LL
Sbjct: 945 HKLIMVGCVPSLRRYPPLEKLL 966
Score = 200 (75.5 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 78/274 (28%), Positives = 132/274 (48%)
Query: 391 LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSA 450
LN+ Q +++++L + LI G PGTGKT T+ + L A +L+ + +++A
Sbjct: 595 LNKPQKQAMKQVLLSRDYT--LIVGMPGTGKTTTICALVRILSAC--GFSVLLTSFTHTA 650
Query: 451 ADHLLEKILGEKAVEVRENEIFRLNAPSRPY--EDV-NADHIRFCFFDEQIFKCPPLAAL 507
D++L K+ K +R +++ R + E++ + I+ E+++ P+ A
Sbjct: 651 VDNILLKLAKFKVGFLRLGRAQKVHPDIRKFTEEEICRSKSIKSVTDLEELYNSQPVVAT 710
Query: 508 VCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAG 567
C I ++ F +DEA Q S+P + P+ +C K V+V G
Sbjct: 711 ACMGINHPIFVQKQ-----------FDFCIVDEASQISQPICLGPL--FCSKRFVLV--G 755
Query: 568 DPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSK 627
D QL P++ + EA GM +S +RL + N+N V +L YR + +I+ L +K
Sbjct: 756 DHQQLPPLVQNSEARDLGMSESLFKRLEQ-------NQNAVVQLTVQYRMNSKIMSLSNK 808
Query: 628 LFYEEELIACKDESISCTAYLNFLPNKEFPVLFF 661
L YE +L C E +S A N LPN + L F
Sbjct: 809 LVYEGKL-ECGSEKVS-NATAN-LPNLKMLKLEF 839
>UNIPROTKB|G4MK85 [details] [associations]
symbol:MGG_02491 "DNA replication ATP-dependent helicase
dna2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0004386 EMBL:CM001231 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742 InterPro:IPR022765
Pfam:PF01930 RefSeq:XP_003709288.1 ProteinModelPortal:G4MK85
EnsemblFungi:MGG_02491T0 GeneID:2681588 KEGG:mgr:MGG_02491
Uniprot:G4MK85
Length = 1689
Score = 153 (58.9 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 49/159 (30%), Positives = 85/159 (53%)
Query: 637 CKDESISCTAYLNFLPNKEFPVLFFGIQGC-DEREGSNPSWF-NRIEVSKVVEIIQKLTS 694
C D + SC +L L + + V F D RE + + N +E VV++++ L +
Sbjct: 1415 CTDGN-SC--WLRHLVDPDTRVAFVNTDALPDSREEAKGNRIVNPVEAQLVVQLVESLMT 1471
Query: 695 TGNLSEEDIGVITPYRQQVLKL-NKALESLYMPD---IKVGSVEQFQGQERQVIIVSTVR 750
G + +IGV+T YR Q+ L +K L D +++ + ++FQG++++V+++S VR
Sbjct: 1472 LG-VPANEIGVMTHYRSQLALLKHKLLRGKNTGDATAVEMHTADRFQGRDKEVVVLSLVR 1530
Query: 751 STIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGN 789
S + H L + RR NVA TRA + L++IG+
Sbjct: 1531 SN------EACHIGDLLRDWRRINVAFTRAKTKLLVIGS 1563
Score = 112 (44.5 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 30/95 (31%), Positives = 53/95 (55%)
Query: 390 NLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNS 449
+LN +Q ++EK++ K L+ G PGTGKT T+ I L R+ +L+ + ++S
Sbjct: 1149 SLNVDQKKAVEKVMSAKDYA--LVLGMPGTGKTTTIAHIIRALI--RQGKSVLLTSYTHS 1204
Query: 450 AADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDV 484
A D++L K+ G+ + RL AP++ + +V
Sbjct: 1205 AVDNILLKLKGDSI------PVLRLGAPAKVHPEV 1233
Score = 106 (42.4 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 50/208 (24%), Positives = 90/208 (43%)
Query: 436 REDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFD 495
R+ +L+ + ++SA D++L K+ G+ + RL AP++ + +V +
Sbjct: 1191 RQGKSVLLTSYTHSAVDNILLKLKGDSI------PVLRLGAPAKVHPEVQ-EFATLAAQP 1243
Query: 496 EQIFKCPPLAALVCYRIIISTYMSASL-IYAEGVDRGHFSHIFLDEAGQASEPESMVPIS 554
F+ A ++ +T + S ++ E F + +DEA Q + P + PI
Sbjct: 1244 MNSFE-EIRTAWHDLPVVATTCLGISHPLFNERT----FDYCIVDEASQITLPICLGPI- 1297
Query: 555 SYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRN 614
+ VL GD QL P++ + EA G+ S + L + P + V L
Sbjct: 1298 ---RMARTFVLVGDHNQLPPLVQNEEARKGGLDVSLFKLLSDTHP------DSVVNLEHQ 1348
Query: 615 YRSHPQILHLPSKLFYEEELIACKDESI 642
YR ++ L ++L YE L C E +
Sbjct: 1349 YRMCEDVMALSNELIYEGHL-KCGTEEL 1375
Score = 40 (19.1 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 10/22 (45%), Positives = 10/22 (45%)
Query: 293 GDFIFAKHAYEDTSSAYQGFIH 314
GDF F T SA QG H
Sbjct: 504 GDFDFEAAELAATQSAQQGAAH 525
>POMBASE|SPCC1739.03 [details] [associations]
symbol:hrr1 "Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
PomBase:SPCC1739.03 GO:GO:0005829 GO:GO:0005524 GO:GO:0007059
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0004386 GO:GO:0031048
eggNOG:COG1112 GO:GO:0016585 GO:GO:0031380 PIR:T41111
RefSeq:NP_588411.2 DIP:DIP-29303N STRING:O74465
EnsemblFungi:SPCC1739.03.1 GeneID:2539248 OrthoDB:EOG4DRDMD
NextBio:20800418 Uniprot:O74465
Length = 999
Score = 169 (64.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 65/216 (30%), Positives = 103/216 (47%)
Query: 604 NENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNK-EFPVLFFG 662
N+ T+L R HPQI L S ++ E+L D I T Y +P E F
Sbjct: 768 NDMEYTRLTMQRRMHPQIRRLVSSVY--EDL---SDYEI--TKYWPSIPGMGEIRRFFLT 820
Query: 663 IQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKAL-E 721
++ +G S N E +V+ L + G + + I +T Y Q + + L E
Sbjct: 821 HSRIEDNDGF-ASKINLFEAQMLVQFAVYLINNG-VEPQKITCLTFYAAQKDLIERLLSE 878
Query: 722 SLYMPD--IKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTR 779
SL IKV +V+ +QG+E V+++S VR+ DR +GFLS+P R V+++R
Sbjct: 879 SLNREKHFIKVATVDGYQGEENDVVLLSLVRNN------DRTE-VGFLSSPHRVCVSLSR 931
Query: 780 AISLLIIIGNPHIVSK-DPYWHQLLWYCSDNNSYQG 814
A L I GN +V++ +P W + ++ + QG
Sbjct: 932 ARRGLFIFGNAQLVAESNPLWWDAINTLMNDETIQG 967
Score = 80 (33.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDARL--LVCAPSNSAADHLLEKILGEKAVEVR 467
+I GPPGTGK+ ++AI L L LV +N A D +L ++L + A +R
Sbjct: 390 IIQGPPGTGKSFVTLKAIETLLENTHSHVLPILVACQTNHAVDQILIRLLHQGASVMR 447
>WB|WBGene00014208 [details] [associations]
symbol:ZK1067.2 species:6239 "Caenorhabditis elegans"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] GeneTree:ENSGT00700000104467
EMBL:Z70038 RefSeq:NP_001254204.1 EnsemblMetazoa:ZK1067.2b
GeneID:174463 KEGG:cel:CELE_ZK1067.2 CTD:174463 WormBase:ZK1067.2b
OMA:THIGVQI Uniprot:E9P860
Length = 2443
Score = 180 (68.4 bits), Expect = 3.2e-11, Sum P(4) = 3.2e-11
Identities = 79/277 (28%), Positives = 126/277 (45%)
Query: 536 IFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSRE-AETYGMGKSYLERL 594
+ ++EA + E IS+ VV+ GD QL P E YG+ S ERL
Sbjct: 1464 LIVEEAAEVLEAHI---ISAMISTVEHVVMIGDHKQLRPNPAVHELGVAYGLRISMFERL 1520
Query: 595 FECE-PYCHGNENYVTKLVRNYRSHPQILHLPSKL-FYEEELIACKDESISCTAYLNFLP 652
E P+ ++L + +R + I KL FY+ A E++ + +
Sbjct: 1521 VERGLPF--------SQLRQQHRMNLTISDKIVKLSFYDNVTDA---ENVGLYPDVQGMA 1569
Query: 653 NKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ 712
LFF E SW N+ E+S V +++ L N + DI V+ Y Q
Sbjct: 1570 TN----LFFWSHTSMEESPDEVSWLNKHEISMTVALVKHLLKQ-NYTTNDIVVLATYSAQ 1624
Query: 713 VLKLNKALESLY--MPD---IKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFL 767
+ + +++ PD I V +V+ FQG+ER+++IVS VRS H +GFL
Sbjct: 1625 KNLMYREYANVFGSTPDSNVIPVETVDSFQGKERKIVIVSLVRS---HRGGRENTGIGFL 1681
Query: 768 SNPRRFNVAVTRAISLLIIIGN-PHIVSKDPYWHQLL 803
+ R VA+TRA + IIGN +I++ W++++
Sbjct: 1682 AVANRICVALTRAQHGMYIIGNGAYIMNNSELWNKIV 1718
Score = 88 (36.0 bits), Expect = 3.2e-11, Sum P(4) = 3.2e-11
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 412 LIYGPPGTGKT---MTLVEAILQ--LYATREDARLLVCAPSNSAADHLLEKI 458
LI GPPGTGKT + +V+ ILQ Y + L+VC +NS D+LLE+I
Sbjct: 1058 LIQGPPGTGKTHIGVQIVKTILQNRSYWKITEPILVVCF-TNSGLDNLLERI 1108
Score = 44 (20.5 bits), Expect = 3.2e-11, Sum P(4) = 3.2e-11
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 251 EEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPS----LVNGDFIFAK 299
EE+Q +E E+V R ++V G+ ++ S L+NG ++ +
Sbjct: 330 EEVQEEEGDHILSSEDVHAARNVCETKILVRGVPQKNDSELSKLINGSKLYVR 382
Score = 41 (19.5 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 494 FDEQIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFSHI 536
FDE F+ +C+RI T +S + + V R H S I
Sbjct: 25 FDEDPFRGQRRRPWMCFRIGYPTSEFSSEHFMKFVKRCHTSMI 67
Score = 39 (18.8 bits), Expect = 3.2e-11, Sum P(4) = 3.2e-11
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 805 YCSDNNSYQGCALPEREEFADEDPTAAECWNH 836
+C++ +Q C ER D A C N+
Sbjct: 2045 FCTNKCEHQSCGAGERGFGRDCSKLCALCVNN 2076
>UNIPROTKB|Q9P2E3 [details] [associations]
symbol:ZNFX1 "NFX1-type zinc finger-containing protein 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] Pathway_Interaction_DB:telomerasepathway
GO:GO:0046872 eggNOG:COG1112 EMBL:AL049766 EMBL:AB037825
EMBL:AK000573 EMBL:AK002139 EMBL:AK022641 EMBL:AK023836
IPI:IPI00165981 IPI:IPI00220462 RefSeq:NP_066363.1
UniGene:Hs.371794 ProteinModelPortal:Q9P2E3 SMR:Q9P2E3
IntAct:Q9P2E3 STRING:Q9P2E3 PhosphoSite:Q9P2E3 DMDM:23821814
PaxDb:Q9P2E3 PeptideAtlas:Q9P2E3 PRIDE:Q9P2E3
Ensembl:ENST00000371752 Ensembl:ENST00000396105 GeneID:57169
KEGG:hsa:57169 UCSC:uc002xui.3 CTD:57169 GeneCards:GC20M047854
HGNC:HGNC:29271 HPA:HPA046629 neXtProt:NX_Q9P2E3
PharmGKB:PA143485687 HOVERGEN:HBG052201 InParanoid:Q9P2E3
OMA:CVRLCSE PhylomeDB:Q9P2E3 ChiTaRS:ZNFX1 GenomeRNAi:57169
NextBio:63185 ArrayExpress:Q9P2E3 Bgee:Q9P2E3 CleanEx:HS_ZNFX1
Genevestigator:Q9P2E3 GermOnline:ENSG00000124201 Uniprot:Q9P2E3
Length = 1918
Score = 178 (67.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 74/280 (26%), Positives = 128/280 (45%)
Query: 536 IFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSY-LE-R 593
+ ++EA + E ++ +S C+ ++L GD QL P A Y + K++ LE
Sbjct: 1003 VIVEEAAEVLEAHTIATLSKACQH---LILIGDHQQLRP-----SANVYDLAKNFNLEVS 1054
Query: 594 LFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFY---EEELIACKDESISCTAYLNF 650
LFE N +V +L +R P+I L + Y E K E I + F
Sbjct: 1055 LFE--RLVKVNIPFV-RLNYQHRMCPEIARLLTPHIYQDLENHPSVLKYEKIKGVSSNLF 1111
Query: 651 LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYR 710
FP + +EG + N+ E VVE+ + L + I ++T Y
Sbjct: 1112 FVEHNFPEQ-------EIQEGKSHQ--NQHEAHFVVELCKYFLCQEYLPSQ-ITILTTYT 1161
Query: 711 QQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNP 770
Q+ L K + + ++V V+++QG+E +I++S VRS +++ +GFL
Sbjct: 1162 GQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLVRS-------NQEGKVGFLQIS 1214
Query: 771 RRFNVAVTRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNN 810
R VA++RA + IGN +++K P W +++ +NN
Sbjct: 1215 NRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRENN 1254
Score = 72 (30.4 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 47/179 (26%), Positives = 79/179 (44%)
Query: 304 DTSSAYQGFIHRVEA-DEVHLKFASDFQLNHRDENLYNVQFTYNRVNMRRLYQATDAAQE 362
+T++ ++ + H +E EV + FQ N + N + + Y + R Y T +
Sbjct: 507 ETTAYFEAYRHVLEGLQEVQEEDVP-FQRNIVECNSHVKEPRYLLMGGR--YDFTPLIEN 563
Query: 363 LDTEFLFPSESSGIRLIESNTLVP------ISCNLNEEQMCSIEKILGLKGAPPYLIYGP 416
F G+R N L P + L++ QM +++ L + A +I GP
Sbjct: 564 PSATGEFLRNVEGLRHPRINVLDPGQWPSKEALKLDDSQMEALQFALTRELA---IIQGP 620
Query: 417 PGTGKT---MTLVEAILQLYA----TREDARLLVCAPSNSAADHLLEKILG-EKAVEVR 467
PGTGKT + +V+A+L + + + +LV +N A D LE I +K VR
Sbjct: 621 PGTGKTYVGLKIVQALLTNESVWQISLQKFPILVVCYTNHALDQFLEGIYNCQKTSIVR 679
>UNIPROTKB|I3LBB7 [details] [associations]
symbol:I3LBB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000030264 OMA:STCHITH Uniprot:I3LBB7
Length = 249
Score = 166 (63.5 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 65/239 (27%), Positives = 111/239 (46%)
Query: 530 RGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKS 589
R F +DEA Q S+P + P+ + ++ VL GD QL P++ +REA GM +S
Sbjct: 10 RKTFDFCIVDEASQISQPICLGPLF-FSRR---FVLVGDHQQLPPLVLNREARALGMSES 65
Query: 590 YLERLFECE--------PYCHGNE-----NYVT---KL-VRNYRSHPQILHLPSKLFYEE 632
+RL + + Y ++ N +T KL + + +++LP +
Sbjct: 66 LFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVASAVVNLPKLKDVKL 125
Query: 633 ELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKL 692
EL D S + F PN PV F E + I +K+V + +
Sbjct: 126 ELEFYADYSENPWMVGAFEPNN--PVCFLNTDKVPAPEQVEKGGVSNITEAKLVVYLTSI 183
Query: 693 TSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRS 751
+ +IG+I PYRQQ+ +N L + ++V +V+++QG+++ +I+VS VRS
Sbjct: 184 FVKAGCNPCNIGIIAPYRQQLKVINDLLSHSSVGMVEVNTVDKYQGRDKSIILVSFVRS 242
>UNIPROTKB|F6QXW0 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000076 "DNA replication checkpoint" evidence=ISS]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0017108 "5'-flap endonuclease activity" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=ISS] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISS] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043139 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH EMBL:AAMC01051984
EMBL:AAMC01051985 EMBL:AAMC01051986 Ensembl:ENSXETT00000016310
Uniprot:F6QXW0
Length = 1048
Score = 176 (67.0 bits), Expect = 8.6e-10, Sum P(3) = 8.6e-10
Identities = 53/144 (36%), Positives = 79/144 (54%)
Query: 668 EREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPD 727
E +G +W IE +K+V + KL DIG+I PYRQQ+ ++ SL
Sbjct: 901 EEKGGISNW---IE-AKLVFCLTKLFLKAGCRPSDIGIIAPYRQQLKVISNYFNSLSASA 956
Query: 728 IKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLG-FLSNPRRFNVAVTRAISLLII 786
++V +V+++QG+++ VIIVS VRS I D K LG L + RR NVA+TRA LI+
Sbjct: 957 VEVNTVDKYQGRDKSVIIVSFVRSNI-----DGK--LGDLLKDWRRLNVALTRAKHKLIM 1009
Query: 787 IGNPHIVSKDPYWHQLLWYCSDNN 810
+G +S+ QL+ + N
Sbjct: 1010 LGCVPTLSRFLCLEQLICHLKSKN 1033
Score = 65 (27.9 bits), Expect = 8.6e-10, Sum P(3) = 8.6e-10
Identities = 26/92 (28%), Positives = 46/92 (50%)
Query: 349 NMRRLYQ---ATDAAQELDTEFLFPS---ESSGIRLIESNTLVP-ISCNLNEEQMCSIEK 401
N+ RL + +D ++L +F P+ S + ++ +V I LN+ Q ++++
Sbjct: 578 NLSRLMENSPVSDKLRKLIIDFSKPNFVQHLSSVLPSDAKDIVANILKGLNKPQKQAMKR 637
Query: 402 ILGLKGAPPYLIYGPPGTGKTMTLVEAILQLY 433
+L K LI G PGTGKT T+ + L+
Sbjct: 638 VLLSKDYT--LIVGMPGTGKTTTICTLVSTLH 667
Score = 42 (19.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 173 SKRPYSRGGRKKQFSVDKYVVGSRPARYRGQIYQNRLPRYDIPNH-IRELIERKQIPDAI 231
SK + G +K+Q V S A+ R + P N +++LI + +
Sbjct: 692 SKGTVNLGKQKRQHRVTS-TTSSTSAKCRSKTE----PAVSAENKKLQKLISGSHVCIMV 746
Query: 232 TDGLTLK--NYTSFFKTLLIMEEIQL 255
T NY FF +L+++++ L
Sbjct: 747 NGHKTFSQNNYIIFFDNILLLKKLPL 772
Score = 37 (18.1 bits), Expect = 8.6e-10, Sum P(3) = 8.6e-10
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 199 RYRGQIYQNRLPRYDIPNHIRELI 222
+Y ++YQ +L + D+ ++E +
Sbjct: 197 KYLKEMYQLKLNQTDVMGEVQEYL 220
>MGI|MGI:2138982 [details] [associations]
symbol:Znfx1 "zinc finger, NFX1-type containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] MGI:MGI:2138982 GO:GO:0046872
EMBL:CH466551 eggNOG:COG1112 GeneTree:ENSGT00700000104467
EMBL:AL591711 CTD:57169 HOVERGEN:HBG052201 OMA:CVRLCSE
EMBL:AK149249 EMBL:AK150223 EMBL:AK157301 EMBL:BC025488
IPI:IPI00660406 RefSeq:NP_001028368.2 UniGene:Mm.297074
ProteinModelPortal:Q8R151 STRING:Q8R151 PhosphoSite:Q8R151
PaxDb:Q8R151 PRIDE:Q8R151 Ensembl:ENSMUST00000048988 GeneID:98999
KEGG:mmu:98999 HOGENOM:HOG000231023 InParanoid:A2A5R3
NextBio:353739 Bgee:Q8R151 CleanEx:MM_ZNFX1 Genevestigator:Q8R151
GermOnline:ENSMUSG00000039501 Uniprot:Q8R151
Length = 1909
Score = 162 (62.1 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 49/153 (32%), Positives = 78/153 (50%)
Query: 659 LFFGIQGCDERE-GSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLN 717
LFF E+E S N+ E VVE+ Q L L + I ++T Y Q+ L
Sbjct: 1103 LFFVEHNFPEQEIQEGKSHQNQHEAHFVVELCQYLLCQEYLPSQ-ITILTTYTGQLFCLR 1161
Query: 718 KALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAV 777
K + IKV V+++QG+E +I++S VRS +++ +GFL P R VA+
Sbjct: 1162 KLMPVKTFAGIKVHVVDKYQGEENDIILLSLVRS-------NQEGKVGFLQIPNRICVAL 1214
Query: 778 TRAISLLIIIGNPHIVSKDPYWHQLLWYCSDNN 810
+RA + IGN +++K P W +++ +NN
Sbjct: 1215 SRAKKGMYCIGNMQMLAKVPLWSRIIHTLRENN 1247
Score = 138 (53.6 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 62/221 (28%), Positives = 98/221 (44%)
Query: 536 IFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSY-LE-R 593
+ ++EA + E ++ +S C+ ++L GD QL P A Y + K++ LE
Sbjct: 996 VIVEEAAEVLEAHTIATLSKACQH---LILIGDHQQLRP-----SANVYDLAKNFNLEVS 1047
Query: 594 LFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFY---EEELIACKDESISCTAYLNF 650
LFE N +V +L +R P+I L + Y E K E I + F
Sbjct: 1048 LFE--RLVKVNIPFV-RLNYQHRMRPEIARLLTPHIYQDLENHPSVLKYEQIKGVSSNLF 1104
Query: 651 LPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYR 710
FP + +EG + N+ E VVE+ Q L L + I ++T Y
Sbjct: 1105 FVEHNFPEQ-------EIQEGKSHQ--NQHEAHFVVELCQYLLCQEYLPSQ-ITILTTYT 1154
Query: 711 QQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRS 751
Q+ L K + IKV V+++QG+E +I++S VRS
Sbjct: 1155 GQLFCLRKLMPVKTFAGIKVHVVDKYQGEENDIILLSLVRS 1195
Score = 76 (31.8 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 31/86 (36%), Positives = 47/86 (54%)
Query: 391 LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKT---MTLVEAILQLYA-----TREDARLL 442
L++ QM +++ L + A +I GPPGTGKT + +V+A+L + T+ L+
Sbjct: 591 LDDSQMEALQFALTKELA---IIQGPPGTGKTYVGLKIVQALLTNKSVWQINTQTFPILV 647
Query: 443 VCAPSNSAADHLLEKILG-EKAVEVR 467
VC +N A D LE I G +K VR
Sbjct: 648 VCY-TNHALDQFLEGIYGCQKTSIVR 672
>UNIPROTKB|Q886X0 [details] [associations]
symbol:PSPTO_1455 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:COG1112
InterPro:IPR024402 Pfam:PF10881 RefSeq:NP_791281.1
ProteinModelPortal:Q886X0 GeneID:1183092 KEGG:pst:PSPTO_1455
PATRIC:19994154 HOGENOM:HOG000273296 OMA:HYRCHPK
ProtClustDB:CLSK879830 BioCyc:PSYR223283:GJIX-1482-MONOMER
Uniprot:Q886X0
Length = 758
Score = 96 (38.9 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 44/168 (26%), Positives = 74/168 (44%)
Query: 700 EEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFD 759
E+ G I P++ Q L + ++ D +V +FQG+E I+ STV KH +
Sbjct: 481 EDGRGFIAPFKNQATLSGSCLPADFIND----TVHKFQGRECDEIVFSTVLD--KHKSPE 534
Query: 760 RKHCLGFLSNPRRFNVAVTRAISLLIII--------GNPHIVSKDPYWHQLLWYCSDNNS 811
R L F+ + R NVAV+RA + ++ GN HI + Y +Y D +
Sbjct: 535 R---LSFVDDARMVNVAVSRAKNRFTLVTGDGVFKAGNGHIAALIRYME---YYAEDGHI 588
Query: 812 YQGCALPEREEFADEDPTAAECWNHEEEIPQSFQEDNWNQEPFQAENL 859
++ P F D E +E + + + D+ PF++E +
Sbjct: 589 HRA---PVISAF---DLLYKEYDRSQERLNKRLRPDD---SPFKSEQI 627
Score = 89 (36.4 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 382 NTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARL 441
N + P LNE Q+ ++E+ + + LI GPPGTGKT T++ I + + +
Sbjct: 23 NFIFPFG--LNESQLKAVEQAFSSQIS---LIEGPPGTGKTQTILNIIANILL--QGKTV 75
Query: 442 LVCAPSNSAADHLLEKI 458
V + +N+A ++ EK+
Sbjct: 76 AVVSNNNAAVKNVYEKL 92
Score = 87 (35.7 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 36/139 (25%), Positives = 66/139 (47%)
Query: 505 AALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVVV 564
A L Y +I S+ + S++ + G + ++ +DEA Q ++ +S C K+ ++V
Sbjct: 308 AFLKRYPVIGSS--THSIVNSLG-GKAVLDYVIIDEASQQDIVPGVLALS--CAKNLIIV 362
Query: 565 LAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPY-----C---HGNENYVTKLVRNYR 616
GD QL + E G+ ++CE Y C G+ +T L +YR
Sbjct: 363 --GDRKQLAHI-----PEKLGLEAP--APWYDCETYSLLDSCVGVFGDSIPMTLLKEHYR 413
Query: 617 SHPQILHLPSKLFYEEELI 635
HP+I+ ++ FY+ +L+
Sbjct: 414 CHPRIIQFCNQQFYDNQLV 432
>ASPGD|ASPL0000064563 [details] [associations]
symbol:AN7014 species:162425 "Emericella nidulans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0005681 EMBL:BN001304
GO:GO:0004386 GO:GO:0000398 HOGENOM:HOG000170551 GO:GO:0097157
PANTHER:PTHR10887:SF5 ProteinModelPortal:C8VC84
EnsemblFungi:CADANIAT00000462 OMA:TIYENEM Uniprot:C8VC84
Length = 1422
Score = 133 (51.9 bits), Expect = 7.5e-09, Sum P(3) = 7.5e-09
Identities = 79/302 (26%), Positives = 128/302 (42%)
Query: 511 RIIISTYMSASLIYAEGVDRG-HFSHIFLDEAGQASEPESMVPISSYCKKDTV-----VV 564
RII T A++ E D G H+ +I ++EA Q +E ES +P + K+ +V
Sbjct: 1037 RIIAMTSTHAAMRRQEIADLGFHYDNIVMEEAAQITEVESFIPTALQNMKEGQLPLKRIV 1096
Query: 565 LAGDPMQLGPVIYSREAETYG-MGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILH 623
L GD +Q P+I + Y +S RL +T L + R+ P I
Sbjct: 1097 LCGDHLQNSPIIQNLAFRQYAHFEQSLFLRLIRL------GVPAIT-LDQQGRARPSIAE 1149
Query: 624 LPSKLFYEE--ELIACKDESISCTAYLNFLPNKEFPVLFFGI---QGCDEREGSNPSWFN 678
L + Y+ L + A F +F F + QG ERE + P +
Sbjct: 1150 L-FRWRYQNLGNLPIVEQAPEFKQANAGF----QFEYQFINVPDYQGTGEREPT-PHFVQ 1203
Query: 679 RI-EVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALE------SLY-MPDIKV 730
+ E V I Q + G + + I ++ Y Q + L +L+ MP I V
Sbjct: 1204 NLGEAEYAVAIFQYMRLLGYPASK-ISILATYAGQTALIKDVLNHRCSKNTLFGMPKI-V 1261
Query: 731 GSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNP 790
+V+++QG++ II+S R+ +G+L + RR VA++RA L I+G
Sbjct: 1262 TTVDRYQGEQNDYIILSLTRT----------RTVGYLRDVRRLTVALSRARLGLYILGRR 1311
Query: 791 HI 792
+
Sbjct: 1312 EV 1313
Score = 102 (41.0 bits), Expect = 7.5e-09, Sum P(3) = 7.5e-09
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 407 GAPPYL--IYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAV 464
G P L I GPPGTGKT + I +Y R L+ A SN A + L +KI+ A+
Sbjct: 819 GTQPGLTVIVGPPGTGKTDVATQIINNIYHNFPTERTLLVAHSNQALNQLFQKIV---AL 875
Query: 465 EVRENEIFRL 474
++ E + RL
Sbjct: 876 DIDERHLLRL 885
Score = 40 (19.1 bits), Expect = 7.5e-09, Sum P(3) = 7.5e-09
Identities = 11/41 (26%), Positives = 25/41 (60%)
Query: 217 HIRELIERKQIPDAITDGLTLKNYTSFFKTLLIMEEIQLKE 257
++R+ ++ I I D L ++++ F++LLI+E + + E
Sbjct: 41 NVRK-VKHDVIKKDIWDPLETESFS--FRSLLILENLNILE 78
Score = 37 (18.1 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 94 LSVMKPPSPG 103
+S KPP+PG
Sbjct: 785 VSTYKPPNPG 794
>TAIR|locus:2064158 [details] [associations]
symbol:EMB2765 "EMBRYO DEFECTIVE 2765" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0005886 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112 HOGENOM:HOG000170551
KO:K12874 OMA:RTKAVGH GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:AY099864 IPI:IPI00544394 RefSeq:NP_850297.1 UniGene:At.23967
ProteinModelPortal:Q8L5Y4 SMR:Q8L5Y4 STRING:Q8L5Y4 PaxDb:Q8L5Y4
PRIDE:Q8L5Y4 EnsemblPlants:AT2G38770.1 GeneID:818459
KEGG:ath:AT2G38770 TAIR:At2g38770 InParanoid:Q8L5Y4
PhylomeDB:Q8L5Y4 ProtClustDB:CLSN2680117 Genevestigator:Q8L5Y4
Uniprot:Q8L5Y4
Length = 1509
Score = 121 (47.7 bits), Expect = 5.5e-08, Sum P(4) = 5.5e-08
Identities = 69/288 (23%), Positives = 125/288 (43%)
Query: 511 RIIISTYMSASLIYAEGVDRGH-FSHIFLDEAGQASEPESMVPISSYCKKDTVV-----V 564
+I+ T A+L + + G + ++ ++E+ Q E E+ +P+ ++D +
Sbjct: 1094 KIVAMTCTHAALKRRDFLQLGFKYDNLLMEESAQILEIETFIPMLLQRQEDGHARLKRCI 1153
Query: 565 LAGDPMQLGPVIYSREAETYG-MGKSYLERLFECE-PYCHGNENYVTKLVRNYRSHPQIL 622
L GD QL PV+ + + Y M +S R PY N R+ P +
Sbjct: 1154 LIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIELNAQG--------RARPSLA 1205
Query: 623 HLPSKLFYE-EELIACKDESISCTAYLNFLPNKEFPVLFFGIQGCDEREGSNPS-WF--N 678
L + + + +L K+ I A F + E+ ++ + + R S PS WF N
Sbjct: 1206 KLYNWRYRDLGDLSIVKEAPIFQRANAGF--SYEYQLV--NVPDYEGRGESTPSPWFYQN 1261
Query: 679 RIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMP------DIKVGS 732
+ E +V + + G + + I ++T Y Q L + + +P KV +
Sbjct: 1262 QGEAEYIVSVYIYMRLLGYPANK-ISILTTYNGQKLLIRDVINRRCVPYPFIGPPSKVTT 1320
Query: 733 VEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRA 780
V++FQGQ+ I++S VR+ +G L + RR VA++RA
Sbjct: 1321 VDKFQGQQNDFILLSLVRTRF----------VGHLRDVRRLVVAMSRA 1358
Score = 104 (41.7 bits), Expect = 5.5e-08, Sum P(4) = 5.5e-08
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 405 LKGAPPYL--IYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEK 462
+ G P L + GPPGTGKT T V+ + LY R L+ SN A + L EKI+ E+
Sbjct: 875 ISGIQPGLTMVVGPPGTGKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIM-ER 933
Query: 463 AVEVR 467
V R
Sbjct: 934 DVPAR 938
Score = 47 (21.6 bits), Expect = 5.5e-08, Sum P(4) = 5.5e-08
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 26 DYKSECSYNPSEEDPVQISFPFPFIDGKPQSVSVGETAVDSITIKNTTREPVELWSKIYA 85
+Y E +P+E+ P++ S P + P S+++ E D +T + E W K
Sbjct: 19 EYPLELPSHPAEK-PLE-SKPGSNL---PSSITLSEIQQDRLT-----KIAEESWIKTGG 68
Query: 86 STPENTFTLSVMK 98
PE F V+K
Sbjct: 69 KLPEKPFDPEVVK 81
Score = 41 (19.5 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 80 WSKIYASTPENTFTLSVMKPPSPGSD 105
WS++ + P N F ++ +K P+ G +
Sbjct: 552 WSRM--AVPINDFKIAQVKQPNIGEE 575
Score = 40 (19.1 bits), Expect = 5.5e-08, Sum P(4) = 5.5e-08
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 281 PGLAERRPSLVNGDFIFAKHAY 302
P + E +PS V + F+ +Y
Sbjct: 570 PNIGEEKPSSVTAEVTFSIKSY 591
>DICTYBASE|DDB_G0274797 [details] [associations]
symbol:aqr "intron-binding protein aquarius homolog"
species:44689 "Dictyostelium discoideum" [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR024860 dictyBase:DDB_G0274797
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000012
GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 RefSeq:XP_643918.1 ProteinModelPortal:Q555Z2
PRIDE:Q555Z2 EnsemblProtists:DDB0233439 GeneID:8619345
KEGG:ddi:DDB_G0274797 InParanoid:Q555Z2 ProtClustDB:CLSZ2431000
Uniprot:Q555Z2
Length = 1487
Score = 120 (47.3 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 36/110 (32%), Positives = 51/110 (46%)
Query: 378 LIESNTLVPISCNLNEEQMCSIEKIL-GLKGAPPYLIYGPPGTGKTMTLVEAILQLYATR 436
+I+ L I N E IE I G+K LI GPPGTGKT V+ I +Y +
Sbjct: 848 IIKKENLEEIKRNKIEFTSKQIEAISSGMKRDNLTLIVGPPGTGKTDIAVQIISNIYHSS 907
Query: 437 EDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNA 486
+ R L+ SN A + L EKI +++ E + RL + N+
Sbjct: 908 PNERTLIITHSNQALNQLFEKIY---RLDINERYLLRLGHGQKQLSSTNS 954
Score = 95 (38.5 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 61/237 (25%), Positives = 105/237 (44%)
Query: 563 VVLAGDPMQLGPVIYSREAETYG-MGKSYLERLFECE-PYCHGNENYVTKLVRNYRSHPQ 620
V+L GD QL P++ ++ Y +S RL E P+ +T L R RS P
Sbjct: 1198 VILIGDHNQLPPIVQNQSLAKYSHFDQSLFTRLIRLEIPH-------IT-LDRQGRSRPS 1249
Query: 621 ILHLPS-KLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGIQ-----GCDEREGSNP 674
I L S K ++L K++ A N P + + G E E + P
Sbjct: 1250 ISELFSWKYKGLQDLPLVKEQLQFKLA--N--PGLAYDYQLINVDESDGYGVGESEPT-P 1304
Query: 675 SWFNRI-EVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPD------ 727
++ + E +V + Q L + G SE+ I V+T Y Q L ++ P
Sbjct: 1305 YFYQNLGEAEYIVAMFQYLIAIGYPSEK-ITVLTTYNGQKNLLRDVFKAKCTPQDPKKTQ 1363
Query: 728 ----IKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRA 780
+K+ +++++QGQ+ +I++S VR+ +++ G + + RR VA++RA
Sbjct: 1364 YGLPLKITTIDKYQGQQNDIILLSLVRT--------KQY--GHIRDVRRLIVAMSRA 1410
Score = 52 (23.4 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 511 RIIISTYMSASLIYAEGVDRGH-FSHIFLDEAGQASEPESMVPISSYCKK----DTVVVL 565
+I+ T A+L E + G F ++ ++E+ Q S+ ES +P+ D ++ +
Sbjct: 1119 KIVAMTCTHAALKRNELLRLGFKFDNLLMEESAQISDIESFIPLQLQLNSNEIGDAIIGV 1178
Query: 566 AGD 568
GD
Sbjct: 1179 DGD 1181
>ZFIN|ZDB-GENE-050508-3 [details] [associations]
symbol:zgc:113057 "zgc:113057" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026855 ZFIN:ZDB-GENE-050508-3
GO:GO:0004386 eggNOG:COG1112 PANTHER:PTHR10887:SF16 IPI:IPI00492493
EMBL:BC094297 RefSeq:NP_001018332.1 UniGene:Dr.115608
ProteinModelPortal:Q52KK8 GeneID:552926 KEGG:dre:552926
HOGENOM:HOG000007768 InParanoid:Q52KK8 NextBio:20879878
Uniprot:Q52KK8
Length = 231
Score = 148 (57.2 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 43/128 (33%), Positives = 65/128 (50%)
Query: 686 VEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALESLYMPDIKVGSVEQFQGQERQVII 745
V + L +S E I ++TPY QV ++ LE + ++ V +V + QG E +I
Sbjct: 58 VRVADLLIKQSGVSPEHIAILTPYNAQVSEIKMTLEKKNVRNVTVCTVMKSQGSEWPYVI 117
Query: 746 VSTVRSTIKHNDFD----RKHC------LGFLSNPRRFNVAVTRAISLLIIIGNPHIVSK 795
VSTVRS +D R H LGF+++ + NVA+TRA L I+GN ++
Sbjct: 118 VSTVRSC-STSDIQAYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGNSDLLRC 176
Query: 796 DPYWHQLL 803
W +LL
Sbjct: 177 CELWDRLL 184
>ZFIN|ZDB-GENE-040426-1189 [details] [associations]
symbol:aqr "aquarius homolog (mouse)" species:7955
"Danio rerio" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 ZFIN:ZDB-GENE-040426-1189
GO:GO:0005681 GO:GO:0000398 CTD:9716 HOGENOM:HOG000170551
HOVERGEN:HBG080430 KO:K12874 GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:BC160661 IPI:IPI00861759 RefSeq:NP_956758.2 UniGene:Dr.17308
ProteinModelPortal:B1H1M2 DNASU:393436 GeneID:393436
KEGG:dre:393436 eggNOG:NOG272077 NextBio:20814473
ArrayExpress:B1H1M2 Uniprot:B1H1M2
Length = 1525
Score = 114 (45.2 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI 471
++ GPPGTGKT V+ I LY + R L+ SN A + L EKI+ A+++ E +
Sbjct: 819 MVVGPPGTGKTNVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIM---ALDIDERHL 875
Query: 472 FRL 474
RL
Sbjct: 876 LRL 878
Score = 83 (34.3 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 665 GCDEREGSNPSWF-NRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ------VLKLN 717
G E E NP ++ N E V + + G +E I ++T Y Q V+
Sbjct: 1186 GVGESE-PNPYFYQNLAEAEYSVALYMYMRLLGYPAER-ISILTTYNGQKHLIRDVIHQR 1243
Query: 718 KALESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAV 777
A S + KV +V++FQGQ+ II+S VR+ +G L + RR VA+
Sbjct: 1244 CASNSFFGQPSKVTTVDRFQGQQNDYIILSLVRTK----------AVGHLRDVRRLVVAM 1293
Query: 778 TRA 780
+RA
Sbjct: 1294 SRA 1296
Score = 67 (28.6 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 511 RIIISTYMSASLIYAEGVDRGH-FSHIFLDEAGQASEPESMVPISSYCKKDTVV-----V 564
+II T A+L + V+ G + +I ++EA Q E E+ +P+ +D +
Sbjct: 1032 KIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPLLLQNPEDGYSRLKRWI 1091
Query: 565 LAGDPMQLGPVIYSREAETYG-MGKSYLER 593
+ GD QL PVI + + Y M +S R
Sbjct: 1092 MIGDHHQLPPVIKNMAFQKYSNMEQSLFTR 1121
>UNIPROTKB|F1PA16 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0000398 OMA:RTKAVGH GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467
EMBL:AAEX03016041 Ensembl:ENSCAFT00000013319 Uniprot:F1PA16
Length = 1483
Score = 114 (45.2 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI 471
++ GPPGTGKT V+ I +Y E R L+ PSN A + L EKI+ A+++ E +
Sbjct: 820 MVVGPPGTGKTDVAVQIISNIYHFPEQ-RTLIVTPSNPALNQLFEKIM---ALDIDERHL 875
Query: 472 FRL 474
RL
Sbjct: 876 LRL 878
Score = 85 (35.0 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 36/125 (28%), Positives = 64/125 (51%)
Query: 664 QGCDEREGSNPSWFNRI-EVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ--VLK--LNK 718
QG E E NP ++ + E VV + + G +++ I ++T Y Q +++ +N+
Sbjct: 1185 QGVGESE-PNPYFYQNLGEAEYVVALFMYMCLLGYPADK-ISILTTYNGQKHLIRDIINR 1242
Query: 719 ALES---LYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNV 775
S + P+ KV +V++FQGQ+ I++S VR+ +G L + RR V
Sbjct: 1243 RCGSNPLIGRPN-KVTTVDRFQGQQNDYILLSLVRT----------RAVGHLRDVRRLVV 1291
Query: 776 AVTRA 780
A++RA
Sbjct: 1292 AMSRA 1296
Score = 64 (27.6 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 511 RIIISTYMSASLIYAEGVDRGH-FSHIFLDEAGQASEPESMVPISSYCKKDTVV-----V 564
+II T A+L + V G + +I ++EA Q E E+ +P+ +D +
Sbjct: 1032 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWI 1091
Query: 565 LAGDPMQLGPVIYSREAETYG-MGKSYLER 593
+ GD QL PVI + + Y M +S R
Sbjct: 1092 MIGDHHQLPPVIKNMAFQKYSNMEQSLFTR 1121
>UNIPROTKB|F1MUW2 [details] [associations]
symbol:F1MUW2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:DAAA02028420 EMBL:DAAA02028416
EMBL:DAAA02028417 EMBL:DAAA02028418 EMBL:DAAA02028419
IPI:IPI00852511 Ensembl:ENSBTAT00000016895 Uniprot:F1MUW2
Length = 1466
Score = 111 (44.1 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI 471
++ GPPGTGKT V+ I +Y + R L+ SN A + L EKI+ A+++ E +
Sbjct: 803 MVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIM---ALDIDERHL 859
Query: 472 FRL 474
RL
Sbjct: 860 LRL 862
Score = 85 (35.0 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 36/125 (28%), Positives = 64/125 (51%)
Query: 664 QGCDEREGSNPSWFNRI-EVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ--VLK--LNK 718
QG E E NP ++ + E VV + + G +++ I ++T Y Q +++ +N+
Sbjct: 1168 QGVGESE-PNPYFYQNLGEAEYVVALFMYMCLLGYPADK-ISILTTYNGQKHLIRDIINR 1225
Query: 719 ALES---LYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNV 775
S + P+ KV +V++FQGQ+ I++S VR+ +G L + RR V
Sbjct: 1226 RCGSNPLIGRPN-KVTTVDRFQGQQNDYILLSLVRT----------RAVGHLRDVRRLVV 1274
Query: 776 AVTRA 780
A++RA
Sbjct: 1275 AMSRA 1279
Score = 64 (27.6 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 511 RIIISTYMSASLIYAEGVDRGH-FSHIFLDEAGQASEPESMVPISSYCKKDTVV-----V 564
+II T A+L + V G + +I ++EA Q E E+ +P+ +D +
Sbjct: 1015 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWI 1074
Query: 565 LAGDPMQLGPVIYSREAETYG-MGKSYLER 593
+ GD QL PVI + + Y M +S R
Sbjct: 1075 MIGDHHQLPPVIKNMAFQKYSNMEQSLFTR 1104
>DICTYBASE|DDB_G0274777 [details] [associations]
symbol:DDB_G0274777 "DNA replication helicase"
species:44689 "Dictyostelium discoideum" [GO:0006261 "DNA-dependent
DNA replication" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR014808
dictyBase:DDB_G0274777 Pfam:PF08696 GO:GO:0005634 GO:GO:0006261
EMBL:AAFI02000012 GO:GO:0004003 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 KO:K10742 RefSeq:XP_643888.1
ProteinModelPortal:Q86IV6 EnsemblProtists:DDB0233088 GeneID:8619314
KEGG:ddi:DDB_G0274777 InParanoid:Q86IV6 Uniprot:Q86IV6
Length = 1838
Score = 116 (45.9 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 86/347 (24%), Positives = 148/347 (42%)
Query: 391 LNEEQMCSIEKILGLKGAPPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSA 450
LN +Q +I K L K LI+G PGTGKT TLV +++ + R ++L+ + ++++
Sbjct: 1322 LNIDQRNAIIKTLSAKDYS--LIHGMPGTGKT-TLVISLIHIL-WRLGKKVLITSFTHTS 1377
Query: 451 ADHLLEKILGEKAVEVRENEIFRLNAPSRPYEDVNADHIRFCFFDEQIFKCPPLAALVCY 510
DHLL K K + E+ R+ A S D + H RF + +
Sbjct: 1378 LDHLLLKF--NK--QYPNIEMLRV-ASSLNQIDPSL-H-RFTLEKQSFGNITQSKQYLER 1430
Query: 511 RIIISTYMSASLIYAEGVDRGHFSHIFLDEAGQASEPESMVPISSYCKKDTVV------- 563
+ +++T S I + + + F + +DEA S+P SM PI CK +V
Sbjct: 1431 QQLVAT--SCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILK-CKSFVLVGDHHQLP 1487
Query: 564 --VLAGDPMQLG-PVIYSREAETYGMGKSYLERLFECEPYCHGNENYVTKLVRNYR---S 617
V + +LG + ++ T S + L+ C+ + L+ N R
Sbjct: 1488 PIVNNKEAGKLGLDISLFKQLST--SHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCG 1545
Query: 618 HPQI--LHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGI-QGCDEREGSNP 674
+ I L L + ++ D + + N V+F Q + E SN
Sbjct: 1546 NQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNSTESSNG 1605
Query: 675 SWF-NRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKAL 720
F N+ E + V + L + N+++ IG+ITP R Q+ + K++
Sbjct: 1606 DLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSI 1652
Score = 100 (40.3 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 24/84 (28%), Positives = 46/84 (54%)
Query: 727 DIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLII 786
++ + ++++FQG+++ II+S VRS ++K + + +R NVA TRA LI
Sbjct: 1750 NLDILTIDKFQGKDKDCIIISFVRSN------EKKEIGELIKDWKRMNVAFTRAKKKLIF 1803
Query: 787 IGNPHIVSKDPYWHQLLWYCSDNN 810
+G+ +SK P++ + N
Sbjct: 1804 VGSKSSLSKFPFFLDFFEFLDSKN 1827
Score = 46 (21.3 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 50 IDGKPQSVSVGETAVDSITIKNTTREPVELWSKIYASTPENTFTLSVMKPPSPGSDSGT 108
+D + S + T + +KNT S +STP N ++ K P+ S S +
Sbjct: 319 LDDEELSQKIN-TPSPKLILKNTFSSTPTQKSPSLSSTPPNKIKITDKKLPNSSSSSSS 376
>RGD|1306223 [details] [associations]
symbol:Aqr "aquarius homolog (mouse)" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901 RGD:1306223
GO:GO:0005681 GO:GO:0000398 GO:GO:0097157 PANTHER:PTHR10887:SF5
IPI:IPI00389267 ProteinModelPortal:D3ZZP0
Ensembl:ENSRNOT00000011917 UCSC:RGD:1306223 ArrayExpress:D3ZZP0
Uniprot:D3ZZP0
Length = 1353
Score = 111 (44.1 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI 471
++ GPPGTGKT V+ I +Y + R L+ SN A + L EKI+ A+++ E +
Sbjct: 820 MVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIM---ALDIDERHL 876
Query: 472 FRL 474
RL
Sbjct: 877 LRL 879
Score = 82 (33.9 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 35/125 (28%), Positives = 64/125 (51%)
Query: 664 QGCDEREGSNPSWFNRI-EVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ--VLK--LNK 718
QG E E NP ++ + E VV + + G +++ I ++T Y Q +++ +N+
Sbjct: 1186 QGVGESE-PNPYFYQNLGEAEYVVALFMYMCLLGYPADK-ISILTTYNGQKHLIRDIINR 1243
Query: 719 ALES---LYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNV 775
+ + P+ KV +V++FQGQ+ I++S VR+ +G L + RR V
Sbjct: 1244 RCGNNPLIGRPN-KVTTVDRFQGQQNDYILLSLVRT----------RAVGHLRDVRRLVV 1292
Query: 776 AVTRA 780
A++RA
Sbjct: 1293 AMSRA 1297
Score = 64 (27.6 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 511 RIIISTYMSASLIYAEGVDRGH-FSHIFLDEAGQASEPESMVPISSYCKKDTVV-----V 564
+II T A+L + V G + +I ++EA Q E E+ +P+ +D +
Sbjct: 1033 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWI 1092
Query: 565 LAGDPMQLGPVIYSREAETYG-MGKSYLER 593
+ GD QL PVI + + Y M +S R
Sbjct: 1093 MIGDHHQLPPVIKNMAFQKYSNMEQSLFTR 1122
>UNIPROTKB|Q81NI5 [details] [associations]
symbol:BAS2982 "Conserved domain protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR RefSeq:NP_845517.1 RefSeq:YP_019848.1
RefSeq:YP_029239.1 ProteinModelPortal:Q81NI5 IntAct:Q81NI5
DNASU:1087476 EnsemblBacteria:EBBACT00000012886
EnsemblBacteria:EBBACT00000015522 EnsemblBacteria:EBBACT00000022854
GeneID:1087476 GeneID:2817117 GeneID:2850799 KEGG:ban:BA_3207
KEGG:bar:GBAA_3207 KEGG:bat:BAS2982 HOGENOM:HOG000093512
OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 119 (46.9 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 75/278 (26%), Positives = 121/278 (43%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPV-IYSREAETYGMGKS-- 589
F + +DE A P+ + +S K+ +V+ GD +QL P+ + + E +G+
Sbjct: 335 FDLVVVDEVSMAFVPQIALA-ASLGKR---IVVCGDFLQLPPIAMANHELVRKWLGEDMF 390
Query: 590 YLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLN 649
Y + E + N + L R H I + Y+ + S+S L
Sbjct: 391 YHAGIVESVNKSEAHPN-LFMLQEQRRMHADISKFTNSFIYKNRVY--DHPSVSERKELA 447
Query: 650 FL-P-NKEFPVLFFGIQ-GCDE-REGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGV 705
L P E VLF Q G ++ ++ S FN + S +V + L + + IG+
Sbjct: 448 QLQPFANEASVLFDTSQMGAFSLKDAASGSRFNIM--SGLVAMQMMLIGLLD-GVQSIGI 504
Query: 706 ITPYRQQVLKLNKALESLYM----PDIKV--GSVEQFQGQERQVIIVSTVRSTIKHNDFD 759
+TPYR Q L+ + + +I V +V +FQG ER ++I TV S + +
Sbjct: 505 VTPYRAQSRFLSTCIREMLQRTKYQNIPVLAATVHKFQGSERDMMIFDTVDSYPQ----E 560
Query: 760 RKHCLGF-LSNPRRFNVAVTRAISLLIIIGNPHIVSKD 796
R L F N R NVAVTRA I + + H + K+
Sbjct: 561 RPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCHYMCKN 598
Score = 84 (34.6 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 409 PPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILG--EKAVEV 466
P ++GPPGTGK+ L I Y ++ +LV A SN+A D L+ ++ EK +
Sbjct: 166 PTTYVWGPPGTGKSYNLSRIISAHY--QKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKKW 223
Query: 467 RENEIFR 473
EI R
Sbjct: 224 TPGEIVR 230
>TIGR_CMR|BA_3207 [details] [associations]
symbol:BA_3207 "conserved domain protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_845517.1 RefSeq:YP_019848.1 RefSeq:YP_029239.1
ProteinModelPortal:Q81NI5 IntAct:Q81NI5 DNASU:1087476
EnsemblBacteria:EBBACT00000012886 EnsemblBacteria:EBBACT00000015522
EnsemblBacteria:EBBACT00000022854 GeneID:1087476 GeneID:2817117
GeneID:2850799 KEGG:ban:BA_3207 KEGG:bar:GBAA_3207 KEGG:bat:BAS2982
HOGENOM:HOG000093512 OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 119 (46.9 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 75/278 (26%), Positives = 121/278 (43%)
Query: 533 FSHIFLDEAGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPV-IYSREAETYGMGKS-- 589
F + +DE A P+ + +S K+ +V+ GD +QL P+ + + E +G+
Sbjct: 335 FDLVVVDEVSMAFVPQIALA-ASLGKR---IVVCGDFLQLPPIAMANHELVRKWLGEDMF 390
Query: 590 YLERLFECEPYCHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLN 649
Y + E + N + L R H I + Y+ + S+S L
Sbjct: 391 YHAGIVESVNKSEAHPN-LFMLQEQRRMHADISKFTNSFIYKNRVY--DHPSVSERKELA 447
Query: 650 FL-P-NKEFPVLFFGIQ-GCDE-REGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGV 705
L P E VLF Q G ++ ++ S FN + S +V + L + + IG+
Sbjct: 448 QLQPFANEASVLFDTSQMGAFSLKDAASGSRFNIM--SGLVAMQMMLIGLLD-GVQSIGI 504
Query: 706 ITPYRQQVLKLNKALESLYM----PDIKV--GSVEQFQGQERQVIIVSTVRSTIKHNDFD 759
+TPYR Q L+ + + +I V +V +FQG ER ++I TV S + +
Sbjct: 505 VTPYRAQSRFLSTCIREMLQRTKYQNIPVLAATVHKFQGSERDMMIFDTVDSYPQ----E 560
Query: 760 RKHCLGF-LSNPRRFNVAVTRAISLLIIIGNPHIVSKD 796
R L F N R NVAVTRA I + + H + K+
Sbjct: 561 RPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCHYMCKN 598
Score = 84 (34.6 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 409 PPYLIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILG--EKAVEV 466
P ++GPPGTGK+ L I Y ++ +LV A SN+A D L+ ++ EK +
Sbjct: 166 PTTYVWGPPGTGKSYNLSRIISAHY--QKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKKW 223
Query: 467 RENEIFR 473
EI R
Sbjct: 224 TPGEIVR 230
>MGI|MGI:1276102 [details] [associations]
symbol:Aqr "aquarius" species:10090 "Mus musculus"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 MGI:MGI:1276102 GO:GO:0000398
CTD:9716 eggNOG:COG1112 HOGENOM:HOG000170551 HOVERGEN:HBG080430
KO:K12874 OMA:RTKAVGH OrthoDB:EOG4ZPDTF GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 EMBL:AK122310 EMBL:AK145547 EMBL:AK151716
EMBL:BC042479 EMBL:U90333 IPI:IPI00330263 RefSeq:NP_033832.2
UniGene:Mm.2545 ProteinModelPortal:Q8CFQ3 SMR:Q8CFQ3
PhosphoSite:Q8CFQ3 PaxDb:Q8CFQ3 PRIDE:Q8CFQ3
Ensembl:ENSMUST00000043160 GeneID:11834 KEGG:mmu:11834
GeneTree:ENSGT00700000104467 InParanoid:Q8CFQ3 NextBio:279759
Bgee:Q8CFQ3 CleanEx:MM_AQR Genevestigator:Q8CFQ3
GermOnline:ENSMUSG00000040383 Uniprot:Q8CFQ3
Length = 1481
Score = 111 (44.1 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI 471
++ GPPGTGKT V+ I +Y + R L+ SN A + L EKI+ A+++ E +
Sbjct: 820 MVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIM---ALDIDERHL 876
Query: 472 FRL 474
RL
Sbjct: 877 LRL 879
Score = 82 (33.9 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 35/125 (28%), Positives = 64/125 (51%)
Query: 664 QGCDEREGSNPSWFNRI-EVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ--VLK--LNK 718
QG E E NP ++ + E VV + + G +++ I ++T Y Q +++ +N+
Sbjct: 1190 QGVGESE-PNPYFYQNLGEAEYVVALFMYMCLLGYPADK-ISILTTYNGQKHLIRDIINR 1247
Query: 719 ALES---LYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNV 775
+ + P+ KV +V++FQGQ+ I++S VR+ +G L + RR V
Sbjct: 1248 RCGNNPLIGRPN-KVTTVDRFQGQQNDYILLSLVRT----------RAVGHLRDVRRLVV 1296
Query: 776 AVTRA 780
A++RA
Sbjct: 1297 AMSRA 1301
Score = 64 (27.6 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 511 RIIISTYMSASLIYAEGVDRGH-FSHIFLDEAGQASEPESMVPISSYCKKDTVV-----V 564
+II T A+L + V G + +I ++EA Q E E+ +P+ +D +
Sbjct: 1037 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWI 1096
Query: 565 LAGDPMQLGPVIYSREAETYG-MGKSYLER 593
+ GD QL PVI + + Y M +S R
Sbjct: 1097 MIGDHHQLPPVIKNMAFQKYSNMEQSLFTR 1126
>UNIPROTKB|O60306 [details] [associations]
symbol:AQR "Intron-binding protein aquarius" species:9606
"Homo sapiens" [GO:0097157 "pre-mRNA intronic binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0000398 EMBL:AB011132 EMBL:EF553519
EMBL:BC036913 EMBL:BC070379 EMBL:BC108262 EMBL:BC127111
EMBL:BC127112 IPI:IPI00796835 PIR:T00333 RefSeq:NP_055506.1
UniGene:Hs.510958 ProteinModelPortal:O60306 SMR:O60306
IntAct:O60306 STRING:O60306 PhosphoSite:O60306 PaxDb:O60306
PRIDE:O60306 Ensembl:ENST00000156471 GeneID:9716 KEGG:hsa:9716
UCSC:uc001ziv.3 CTD:9716 GeneCards:GC15M035147 HGNC:HGNC:29513
MIM:610548 neXtProt:NX_O60306 PharmGKB:PA134869224 eggNOG:COG1112
HOGENOM:HOG000170551 HOVERGEN:HBG080430 InParanoid:O60306 KO:K12874
OMA:RTKAVGH OrthoDB:EOG4ZPDTF ChiTaRS:AQR GenomeRNAi:9716
NextBio:36525 Bgee:O60306 CleanEx:HS_AQR Genevestigator:O60306
GermOnline:ENSG00000021776 GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 Uniprot:O60306
Length = 1485
Score = 111 (44.1 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI 471
++ GPPGTGKT V+ I +Y + R L+ SN A + L EKI+ A+++ E +
Sbjct: 820 MVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIM---ALDIDERHL 876
Query: 472 FRL 474
RL
Sbjct: 877 LRL 879
Score = 82 (33.9 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 35/125 (28%), Positives = 64/125 (51%)
Query: 664 QGCDEREGSNPSWFNRI-EVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ--VLK--LNK 718
QG E E NP ++ + E VV + + G +++ I ++T Y Q +++ +N+
Sbjct: 1186 QGVGESE-PNPYFYQNLGEAEYVVALFMYMCLLGYPADK-ISILTTYNGQKHLIRDIINR 1243
Query: 719 ALES---LYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNV 775
+ + P+ KV +V++FQGQ+ I++S VR+ +G L + RR V
Sbjct: 1244 RCGNNPLIGRPN-KVTTVDRFQGQQNDYILLSLVRT----------RAVGHLRDVRRLVV 1292
Query: 776 AVTRA 780
A++RA
Sbjct: 1293 AMSRA 1297
Score = 64 (27.6 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 511 RIIISTYMSASLIYAEGVDRGH-FSHIFLDEAGQASEPESMVPISSYCKKDTVV-----V 564
+II T A+L + V G + +I ++EA Q E E+ +P+ +D +
Sbjct: 1033 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWI 1092
Query: 565 LAGDPMQLGPVIYSREAETYG-MGKSYLER 593
+ GD QL PVI + + Y M +S R
Sbjct: 1093 MIGDHHQLPPVIKNMAFQKYSNMEQSLFTR 1122
>FB|FBgn0051368 [details] [associations]
symbol:CG31368 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 EMBL:AE014297 GO:GO:0016787
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 RefSeq:NP_996198.2 UniGene:Dm.10009
ProteinModelPortal:Q7KSN8 SMR:Q7KSN8 PaxDb:Q7KSN8
EnsemblMetazoa:FBtr0301042 GeneID:41437 KEGG:dme:Dmel_CG31368
UCSC:CG31368-RB FlyBase:FBgn0051368 InParanoid:Q7KSN8
OrthoDB:EOG43XSJ9 PhylomeDB:Q7KSN8 GenomeRNAi:41437 NextBio:823855
ArrayExpress:Q7KSN8 Bgee:Q7KSN8 Uniprot:Q7KSN8
Length = 1486
Score = 118 (46.6 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 28/80 (35%), Positives = 41/80 (51%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI 471
L+ GPPGTGKT V+ I +Y + R L+ SN A + L EKI+ A+++ E +
Sbjct: 833 LVVGPPGTGKTDVAVQIISNIYHNHPNQRTLIVTHSNQALNQLFEKIM---ALDIDERHL 889
Query: 472 FRLNAPSRPYEDVNADHIRF 491
RL E D+ R+
Sbjct: 890 LRLGHGEEALE-TEKDYSRY 908
Score = 73 (30.8 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 664 QGCDEREGSNPSWF-NRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALES 722
+G E E NP ++ N E +V + + G + + I ++T Y Q + + +
Sbjct: 1202 KGVGESE-PNPYFYQNLAEAEYIVAVYMYMRLLGYPAAK-ISILTTYNGQKHLIRDVINA 1259
Query: 723 LY--MPDI----KVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVA 776
P I K+ +V+++QGQ+ I++S VR+ +G L + RR VA
Sbjct: 1260 RCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTK----------AVGHLRDVRRLVVA 1309
Query: 777 VTRAISLLIIIG 788
++RA L + G
Sbjct: 1310 MSRARLGLYVFG 1321
Score = 70 (29.7 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 511 RIIISTYMSASLIYAEGVDRG-HFSHIFLDEAGQASEPESMVPISSYCKKDTVV-----V 564
+II T A+L E V+ G + +I ++E+ Q E E+ +P+ D + +
Sbjct: 1049 KIIAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDGLNRLKRWI 1108
Query: 565 LAGDPMQLGPVIYSREAETYG-MGKSYLERL 594
+ GD QL PVI + + Y M +S RL
Sbjct: 1109 MIGDHHQLPPVIKNMAFQKYSNMEQSLFTRL 1139
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 281 PGLAERRPSLVNGD 294
P L E++PS V D
Sbjct: 540 PHLGEKKPSRVRAD 553
>WB|WBGene00001258 [details] [associations]
symbol:emb-4 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0009792 GO:GO:0040010 GO:GO:0010171
GO:GO:0040011 GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112
HOGENOM:HOG000170551 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:AL132853
GeneID:180232 KEGG:cel:CELE_Y80D3A.2 CTD:180232
RefSeq:NP_001256831.1 ProteinModelPortal:Q9U1Q7 SMR:Q9U1Q7
PaxDb:Q9U1Q7 PRIDE:Q9U1Q7 EnsemblMetazoa:Y80D3A.2a.1
EnsemblMetazoa:Y80D3A.2a.2 UCSC:Y80D3A.2.1 WormBase:Y80D3A.2a
InParanoid:Q9U1Q7 NextBio:908508 ArrayExpress:Q9U1Q7 Uniprot:Q9U1Q7
Length = 1467
Score = 109 (43.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI 471
++ GPPGTGKT V+ I +Y + R L+ SN A + L EKI+ A++V E +
Sbjct: 824 MVVGPPGTGKTDVAVQIISNIYHNWPNQRTLIVTHSNQALNQLFEKII---ALDVDERHL 880
Query: 472 FRL 474
R+
Sbjct: 881 LRM 883
Score = 106 (42.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 73/300 (24%), Positives = 124/300 (41%)
Query: 511 RIIISTYMSASLIYAEGVDRG-HFSHIFLDEAGQASEPESMVPISSYCKKD-----TVVV 564
+II T A+L E V G + +I ++EA Q E E+ +P+ +D +
Sbjct: 1035 KIIAMTCTHAALRRNELVKLGFRYDNIVMEEAAQILEVETFIPLLLQNPQDGHNRLKRWI 1094
Query: 565 LAGDPMQLGPVIYSREAETYG-MGKSYLERLFECEPYCHGNENYVTKLVRNYRSHPQILH 623
+ GD QL PV+ ++ + Y M +S RL N +L R R+ QI
Sbjct: 1095 MIGDHHQLPPVVQNQAFQKYSNMEQSLFARLVRLSV-----PN--VQLDRQGRARAQIAE 1147
Query: 624 LPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLFFGI---QGCDEREGSNPSWFNRI 680
L + + D + N FP F I G E + S P ++ +
Sbjct: 1148 LYQWRYNGLGNLPHVD---GLPQFQNANAGFAFPFQFIDIPDFNGHGETQPS-PHFYQNL 1203
Query: 681 -EVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKALES-------LYMPDIKVGS 732
E + + G +E+ I ++T Y Q + + + MP KV +
Sbjct: 1204 GEAEYACALYTYMRILGYPAEK-ISILTTYNGQAQLIRDVFQRRCDTNPLIGMP-AKVST 1261
Query: 733 VEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRAISLLIIIGNPHI 792
V+++QGQ+ II+S V++ N +G + + RR VA++RA L ++G +
Sbjct: 1262 VDKYQGQQNDFIILSLVKT---RN-------IGHIRDVRRLVVALSRARLGLYVLGRSKV 1311
Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 18/70 (25%), Positives = 37/70 (52%)
Query: 285 ERRPSLV---NGDFIFA--KHAYEDTSSAYQGFIHR--VEADEVHLKFAS--DFQLNHRD 335
ERRP+ + N +F K +++ Y+ + + D+++L+F + D+ L R+
Sbjct: 422 ERRPNQLTQLNEKPLFPTEKVIWDENIIPYENYTGDGVLALDKLNLQFLTLHDYLL--RN 479
Query: 336 ENLYNVQFTY 345
NL+ ++ TY
Sbjct: 480 FNLFQLESTY 489
>UNIPROTKB|F8VR31 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 IPI:IPI01022599 ProteinModelPortal:F8VR31
Ensembl:ENST00000551118 UCSC:uc001jog.2 ArrayExpress:F8VR31
Bgee:F8VR31 Uniprot:F8VR31
Length = 807
Score = 148 (57.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 59/194 (30%), Positives = 101/194 (52%)
Query: 611 LVRNYRSHPQILHLPSKLFYE-EELIACKDESISCT---AYLNFLPNKEFPVLFFGIQGC 666
L+ ++R I +L S L ++ ++ +AC + ++ A L +K++ L G+ G
Sbjct: 594 LIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSKDY-TLIVGMPGT 652
Query: 667 DEREG-----SNPSWFNRIEVSKVVE--IIQKLTST---GNLSEEDIGVITPYRQQVLKL 716
+ P + VS V E +I LTS S DIG+I PYRQQ+ +
Sbjct: 653 GKTTTICTLVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKII 712
Query: 717 NKAL-ESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLG-FLSNPRRFN 774
N L S+ M ++V +V+++QG+++ +++VS VRS ++ +G L + RR N
Sbjct: 713 NDLLARSIGM--VEVNTVDKYQGRDKSIVLVSFVRS-------NKDGTVGELLKDWRRLN 763
Query: 775 VAVTRAISLLIIIG 788
VA+TRA LI++G
Sbjct: 764 VAITRAKHKLILLG 777
>UNIPROTKB|F1NPB8 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:AADN02003289 EMBL:AADN02003288
IPI:IPI00597734 Ensembl:ENSGALT00000015995 Uniprot:F1NPB8
Length = 1416
Score = 113 (44.8 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 412 LIYGPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEI 471
++ GPPGTGKT V+ I LY + R L+ SN A + L EKI+ A+++ E +
Sbjct: 829 MVVGPPGTGKTDVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIM---ALDIDERHL 885
Query: 472 FRL 474
RL
Sbjct: 886 LRL 888
Score = 71 (30.1 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 30/116 (25%), Positives = 58/116 (50%)
Query: 665 GCDEREGSNPSWFNRI-EVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ--VLK--LNKA 719
G E E NP ++ + E VV + + G ++ I ++T Y Q +++ +N+
Sbjct: 1196 GVGESE-PNPYFYQNLGEAEYVVAVFMYMCLLGYPADR-ISILTTYNGQKHLIRDVINQR 1253
Query: 720 LES---LYMPDIKVGSVEQFQGQERQVIIVSTVRS-TIKHNDFDRKHCLGFLSNPR 771
+ + P+ KV +V++FQGQ+ I++S VR+ + H D + + +S R
Sbjct: 1254 CGNNPLIGRPN-KVTTVDRFQGQQNDYILLSLVRTKAVGHLRRDVRRLVVAMSRAR 1308
Score = 64 (27.6 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 511 RIIISTYMSASLIYAEGVDRGH-FSHIFLDEAGQASEPESMVPISSYCKKDTVV-----V 564
+II T A+L + V+ G + +I ++E+ Q E E+ +P+ +D +
Sbjct: 1042 KIIAMTCTHAALKRHDLVELGFKYDNILMEESAQILEIETFIPLLLQNPQDGFSRLKRWI 1101
Query: 565 LAGDPMQLGPVIYSREAETYG-MGKSYLER 593
+ GD QL PVI + + Y M +S R
Sbjct: 1102 MIGDHHQLPPVIKNMAFQKYSNMEQSLFTR 1131
>UNIPROTKB|F1SRZ7 [details] [associations]
symbol:F1SRZ7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
GO:GO:0005681 GO:GO:0000398 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:CU633172
Ensembl:ENSSSCT00000005301 Uniprot:F1SRZ7
Length = 1206
Score = 98 (39.6 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 415 GPPGTGKTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRL 474
GPPGTGKT V I +Y + R + SN A + L EKI+ A+++ E + RL
Sbjct: 740 GPPGTGKTDVAVPIISNIYRNFPEQRTRIVTRSNHALNQLFEKIM---ALDIDERHLLRL 796
Score = 83 (34.3 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 31/107 (28%), Positives = 57/107 (53%)
Query: 664 QGCDEREGSNPSWFNRI-EVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQ--VLK--LNK 718
QG E E NP ++ + E VV + + G +++ I ++T Y Q +++ +N+
Sbjct: 1103 QGVGESE-PNPYFYQNLGEAEYVVALFMYMCLLGYPADK-ISILTTYNGQKHLIRDIINR 1160
Query: 719 ALES---LYMPDIKVGSVEQFQGQERQVIIVSTVRS-TIKHNDFDRK 761
S + P+ KV +V++FQGQ+ I++S VR+ + H + RK
Sbjct: 1161 RCGSNPLIGRPN-KVTTVDRFQGQQNDYILLSLVRTRAVGHLRYVRK 1206
Score = 64 (27.6 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 511 RIIISTYMSASLIYAEGVDRGH-FSHIFLDEAGQASEPESMVPISSYCKKDTVV-----V 564
+II T A+L + V G + +I ++EA Q E E+ +P+ +D +
Sbjct: 950 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWI 1009
Query: 565 LAGDPMQLGPVIYSREAETYG-MGKSYLER 593
+ GD QL PVI + + Y M +S R
Sbjct: 1010 MIGDHHQLPPVIKNMAFQKYSNMEQSLFTR 1039
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 874 874 0.00085 122 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 168
No. of states in DFA: 624 (66 KB)
Total size of DFA: 468 KB (2220 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 78.13u 0.10s 78.23t Elapsed: 00:00:39
Total cpu time: 78.22u 0.10s 78.32t Elapsed: 00:00:40
Start: Thu May 9 18:01:21 2013 End: Thu May 9 18:02:01 2013
WARNINGS ISSUED: 1