Query 002853
Match_columns 873
No_of_seqs 285 out of 1242
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 04:10:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002853.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002853hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1d0n_A Horse plasma gelsolin; 100.0 6E-165 2E-169 1487.1 74.5 705 7-733 1-726 (729)
2 1j72_A Macrophage capping prot 100.0 1.7E-84 5.9E-89 724.7 40.3 338 1-347 1-347 (347)
3 3fg6_A Adseverin, scinderin; C 100.0 9.7E-81 3.3E-85 697.1 34.3 341 360-720 19-371 (371)
4 2fh1_A Gelsolin; calcium, cont 100.0 1.4E-79 4.9E-84 683.5 39.5 333 384-734 2-342 (344)
5 3fg7_A Villin-1; actin binding 100.0 1.7E-82 5.9E-87 715.6 13.0 354 360-729 29-391 (398)
6 3fg6_A Adseverin, scinderin; C 100.0 1.3E-78 4.6E-83 679.8 35.3 322 1-349 40-369 (371)
7 3fg7_A Villin-1; actin binding 100.0 2.7E-79 9.1E-84 689.7 13.7 319 14-351 60-383 (398)
8 2fh1_A Gelsolin; calcium, cont 100.0 3.3E-76 1.1E-80 656.4 36.0 318 13-350 4-329 (344)
9 1j72_A Macrophage capping prot 100.0 1.3E-73 4.5E-78 637.0 38.8 312 388-716 18-347 (347)
10 1d0n_A Horse plasma gelsolin; 100.0 7.1E-72 2.4E-76 675.2 31.5 315 20-350 393-714 (729)
11 3tu5_B Gelsolin, protein cordo 100.0 5.6E-52 1.9E-56 446.2 14.4 266 5-282 19-292 (297)
12 2ff3_A Gelsolin; protein-prote 100.0 7.8E-44 2.7E-48 345.1 13.8 132 1-132 19-150 (150)
13 3cip_G Gelsolin; actin, dictyo 100.0 2.1E-43 7.3E-48 335.3 14.0 128 2-129 1-128 (128)
14 1t44_G Chimera of gelsolin dom 100.0 1.4E-42 4.8E-47 337.0 13.3 134 6-139 2-135 (147)
15 2vik_A Villin 14T; actin-bindi 100.0 1.1E-38 3.8E-43 302.1 10.2 112 18-130 15-126 (126)
16 3tu5_B Gelsolin, protein cordo 100.0 2.8E-38 9.6E-43 339.9 14.7 245 390-648 34-292 (297)
17 2vik_A Villin 14T; actin-bindi 100.0 4.8E-36 1.6E-40 284.0 11.1 123 376-498 3-126 (126)
18 3cip_G Gelsolin; actin, dictyo 100.0 1.2E-33 4.1E-38 268.3 14.4 110 388-497 17-128 (128)
19 2ff3_A Gelsolin; protein-prote 100.0 2.2E-33 7.6E-38 271.9 14.8 112 388-499 36-149 (150)
20 1t44_G Chimera of gelsolin dom 100.0 3E-33 1E-37 271.5 14.7 114 388-501 14-129 (147)
21 1svq_A Severin; actin-binding; 99.9 4.8E-27 1.7E-31 219.8 9.4 109 127-239 1-109 (114)
22 1kcq_A Gelsolin, brevin, ADF, 99.9 3.8E-25 1.3E-29 203.7 12.7 98 138-240 2-99 (104)
23 1kcq_A Gelsolin, brevin, ADF, 99.9 1.2E-21 4.2E-26 180.3 12.1 92 516-609 3-99 (104)
24 1svq_A Severin; actin-binding; 99.9 9.6E-22 3.3E-26 183.9 9.2 94 514-609 11-110 (114)
25 1qzp_A Dematin; villin headpie 97.2 8.9E-05 3.1E-09 61.8 1.8 30 840-869 4-36 (68)
26 1ujs_A Actin-binding LIM prote 96.8 0.00033 1.1E-08 61.1 1.6 30 840-869 18-50 (88)
27 1yu8_X Villin; alpha helix, 3- 96.7 0.00027 9.1E-09 58.6 0.2 30 840-869 5-35 (67)
28 2k6m_S Supervillin; SVHP, HP, 96.5 0.00075 2.6E-08 56.0 1.5 30 838-869 6-35 (67)
29 3eh2_A Protein transport prote 93.3 0.25 8.5E-06 60.0 10.7 51 253-303 620-672 (766)
30 3eh2_A Protein transport prote 93.1 0.23 8E-06 60.2 9.9 109 618-734 620-757 (766)
31 3efo_B SEC24 related gene fami 92.0 0.3 1E-05 59.3 9.0 109 618-734 624-761 (770)
32 1pcx_A Protein transport prote 91.4 0.47 1.6E-05 57.9 9.8 53 618-670 637-704 (810)
33 1m2o_A SEC23, protein transpor 91.1 0.57 2E-05 56.9 10.0 86 253-343 626-728 (768)
34 2nut_A Protein transport prote 90.9 0.46 1.6E-05 57.7 8.9 86 253-343 624-726 (769)
35 1pcx_A Protein transport prote 89.6 0.47 1.6E-05 57.9 7.6 33 271-303 671-703 (810)
36 3efo_B SEC24 related gene fami 89.5 0.84 2.9E-05 55.4 9.6 52 253-304 624-677 (770)
37 3eh1_A Protein transport prote 89.5 0.22 7.6E-06 60.3 4.5 53 618-670 601-662 (751)
38 1m2v_B SEC24, protein transpor 88.2 0.85 2.9E-05 56.4 8.5 51 618-668 753-818 (926)
39 1m2v_B SEC24, protein transpor 87.3 0.66 2.3E-05 57.3 6.8 31 271-301 787-817 (926)
40 3eh1_A Protein transport prote 83.6 0.79 2.7E-05 55.5 4.9 31 272-302 630-660 (751)
41 1m2o_A SEC23, protein transpor 83.3 1.8 6.2E-05 52.5 7.9 46 618-667 626-671 (768)
42 2nut_A Protein transport prote 80.3 2.2 7.6E-05 51.7 7.2 45 618-666 624-668 (769)
43 1x67_A Drebrin-like protein; c 63.4 15 0.0005 34.8 7.0 89 19-110 33-130 (146)
44 1cfy_A Cofilin; actin-binding, 48.0 40 0.0014 31.4 7.2 87 19-109 25-126 (143)
45 1x67_A Drebrin-like protein; c 47.5 46 0.0016 31.3 7.5 64 411-477 63-128 (146)
46 1hqz_1 ABP1P, actin-binding pr 43.9 52 0.0018 30.6 7.3 89 18-109 29-125 (141)
47 1m4j_A A6 gene product, twinfi 43.0 48 0.0016 30.9 6.9 91 19-110 25-129 (142)
48 1tvj_A Cofilin; ADF, actin bin 40.5 69 0.0023 30.8 7.7 77 44-123 78-163 (166)
49 2vac_A Twinfilin-2; transferas 39.7 53 0.0018 30.3 6.6 90 19-109 22-125 (134)
50 2kvk_A Actin severing and dyna 36.4 63 0.0022 30.3 6.6 61 45-109 61-123 (144)
51 1m4j_A A6 gene product, twinfi 34.3 1E+02 0.0034 28.7 7.6 61 416-478 66-128 (142)
52 1f7s_A Actin depolymerizing fa 32.4 49 0.0017 30.7 5.0 88 19-109 27-128 (139)
53 2vac_A Twinfilin-2; transferas 30.6 1.3E+02 0.0044 27.6 7.6 61 416-478 63-125 (134)
54 1cfy_A Cofilin; actin-binding, 29.3 1.2E+02 0.0042 27.9 7.3 63 412-477 57-125 (143)
55 2i2q_A Cofilin; N-terminal ser 27.2 92 0.0031 28.6 5.9 89 18-110 24-125 (137)
56 2xfa_A Actin depolymerization 26.6 1E+02 0.0034 28.9 6.1 60 44-106 70-132 (148)
57 1cnu_A Actophorin, ADF, cofili 26.2 1.4E+02 0.0049 27.2 7.1 61 45-109 59-122 (137)
58 2kd5_A ADF H, actin severing a 25.6 52 0.0018 30.8 3.9 53 412-464 57-113 (144)
59 1hqz_1 ABP1P, actin-binding pr 25.2 2E+02 0.0069 26.4 8.0 56 411-466 58-116 (141)
60 1t3y_A Coactosin-like protein; 23.6 1.5E+02 0.0053 27.5 6.8 58 410-467 49-110 (141)
61 2kd5_A ADF H, actin severing a 22.5 44 0.0015 31.3 2.7 87 19-109 24-123 (144)
62 1cnu_A Actophorin, ADF, cofili 22.0 2.2E+02 0.0074 26.0 7.4 53 412-464 55-111 (137)
63 2xfa_A Actin depolymerization 21.4 2.9E+02 0.01 25.5 8.3 55 412-466 67-126 (148)
64 2kvk_A Actin severing and dyna 20.2 2.2E+02 0.0075 26.4 7.1 57 417-477 63-122 (144)
No 1
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G*
Probab=100.00 E-value=6.3e-165 Score=1487.06 Aligned_cols=705 Identities=30% Similarity=0.548 Sum_probs=636.0
Q ss_pred cCCcccccCCccccEEEEEEECCeEeecCCCCCCccccCCeEEEEeeeecCCCCCceEEEEEccCCcCchhhhHHHHHHH
Q 002853 7 DIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKAL 86 (873)
Q Consensus 7 ~~d~~~~g~G~~~gl~iWrIe~~~~~~vp~~~~G~Fy~gdsYIVl~t~~~~~g~~~~~i~~W~G~~ss~de~g~AA~~av 86 (873)
++||+|.++|+++|++||||++|+++|||++.||+||+||||||||||...+|..+|+||||+|++||+||+|+||++||
T Consensus 1 ~~~~~f~~~g~~~g~~iWrIe~~~~~~v~~~~~G~Fy~gdsYivL~t~~~~~~~~~~~i~~W~G~~ss~de~g~aA~~tv 80 (729)
T 1d0n_A 1 VEHPEFLKAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHYWLGNECSQDESGAAAIFTV 80 (729)
T ss_dssp CCCTTGGGTTSSSEEEEEEECSSSEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred CcchhhhhcccCCCeEEEEEcCCEEEeCChHhcCcccCCCEEEEEEeccCCCCccceEEEEEcCCCCCHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999987788889999999999999999999999999
Q ss_pred HHHHHhCCCceEEEeeccCCcHHHHhhhCCcEEEecCCccCCCCCCCCCc-cceEEEEeeCcceEEEEEecCCCCCccCC
Q 002853 87 ELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGKSNGET-YKISMLTCKGDHVVRVKEVPFSRSSLNHN 165 (873)
Q Consensus 87 eLd~~lgg~~vq~Re~QG~Es~~Fl~~Fk~~ii~~~Gg~~sgf~~~~~~~-~~~rL~~vkG~~~v~~~eV~~s~sSLns~ 165 (873)
|||++|||.||||||+||+||++||+||+++|+|++||++|||+|++... ..+|||||||+++++++|||++++||||+
T Consensus 81 eLd~~lgg~~vq~Re~Qg~Es~~Fl~~Fk~~i~~~~Gg~~sgf~~v~~~~~~~~rL~~vkG~~~v~~~eV~~s~~SLns~ 160 (729)
T 1d0n_A 81 QLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVVPNEVVVQRLLQVKGRRVVRATEVPVSWESFNNG 160 (729)
T ss_dssp HHHHHTTSCCEEEEEETTCCCHHHHHTCSSCEEEESCCTTTTCCCCCCSSCCCCEEEEEECSSSCEEEEECSSGGGCCSS
T ss_pred HHHHHcCCcceEEEEecCCCCHHHHHhccCCcEEeeCCcccCcccccccCCCCcEEEEEECCCcEEEEEEeccHHHcCCC
Confidence 99999999999999999999999999999999999999999999998655 47899999999999999999999999999
Q ss_pred CceeeeCCCeEEEEeCCCCCHHHHHHHHHHHHHhhccCCCCceeEEEEcCCccCCCCChhhHHHHcCCCCCCCCCCCCCC
Q 002853 166 DVFIVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRDSPSAF 245 (873)
Q Consensus 166 DvFILd~~~~iyvW~G~~S~~~Er~kA~~va~~ik~~~~~g~~~v~~veeG~~~~~~E~~eFw~~lGg~~~~~~~~~~~~ 245 (873)
||||||++++||+|+|++||.+||.+|+++|+.|++.++.|+|+|++|+||+ |+.+||++|||..+++.....+.
T Consensus 161 DvFILd~g~~iy~W~G~~s~~~Er~kA~~~a~~i~~~er~g~~~i~~v~Eg~-----e~~eFw~~LGg~~~~~~~~~~~~ 235 (729)
T 1d0n_A 161 DCFILDLGNNIYQWCGSKSNRFERLKATQVSKGIRDNERSGRAQVSVFEEGA-----EPEAMLQVLGPKPTLPEATEDTV 235 (729)
T ss_dssp SEEEEECSSEEEEEECTTCCHHHHHHHHHHHHHHHHHSGGGCSEEEEEETTC-----CCHHHHHHHCSCCCCCCCCGGGS
T ss_pred CeEEEEcCCEEEEEECCCCCHHHHHHHHHHHHHHhhhhcCCCccEEEecCCC-----ChHHHHHHcCCCcccCCCCcchh
Confidence 9999999999999999999999999999999999987888999999999995 78899999999987765432211
Q ss_pred -CCCCCCCceeEEEE-cCCCCEEEEecC---CCccccCCCCceEEeeCCC-e-EEEEecCCCCHHHHHHHHHHHHHHHHh
Q 002853 246 -QQQPDTPSTTFFWI-NLQGKLCQIAAN---SLNKDMLEKDKCYMLDCVN-E-VFVWTGRNTSITERRISISASEDFLRN 318 (873)
Q Consensus 246 -~~~~~~~~~rLy~v-~~~G~l~~~e~~---~~~q~~L~~~~vyILD~g~-e-IyVWiG~~as~~erk~Al~~A~~y~~~ 318 (873)
.+......+|||++ +.+|++.+.++. +|+|+||++++|||||||+ + ||||+|++|+..||+.||.+|++|+++
T Consensus 236 ~~~~~~~~~~rLy~vs~~~G~l~~~ev~~~~~~~q~~L~~~dv~ILD~g~~~~ifVW~Gk~a~~~er~~A~~~A~~y~~~ 315 (729)
T 1d0n_A 236 KEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKGKQANMEERKAALKTASDFISK 315 (729)
T ss_dssp CCCCCCCCCCEEEEEECSSSSCEEEEEESSSSBCGGGCCTTSEEEEEEGGGTEEEEEECTTSCHHHHTTHHHHHHHHHHH
T ss_pred hhhhccccCcEEEEEECCCCCEEEEEeccCCCCCHHHcCCCCEEEEecCCccEEEEEECCCCCHHHHHHHHHHHHHHHhh
Confidence 12234567899977 568998877664 9999999999999999995 4 999999999999999999999999999
Q ss_pred cCCCCCceEEEecCCccchhhhhhcccCCCCCCCc-ccccchhHHHhhhhhcCCCCCCCC---cc--CCCCccccCCcEE
Q 002853 319 QGRTTGTHLTFLTEGLETTVFRSYFDSWPQIAEPK-LYDEGREKVAAIFKQQGHDVKELP---EE--DFEPYVNCRGILK 392 (873)
Q Consensus 319 ~~R~p~t~i~~V~eG~Ep~~Fk~~F~~W~~~~~~~-~~~~~~~kva~~~~~~~~dv~~lp---~~--e~~~~~d~~g~l~ 392 (873)
.+||++++|++|.||.||.+||++|.+|++..... +......+..+.+++.++|+..|+ .. +.+++++++|+|+
T Consensus 316 ~~~p~~t~i~~V~eG~Ep~~Fk~~F~~W~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~l~~~p~~~~~~~~~d~g~g~l~ 395 (729)
T 1d0n_A 316 MDYPKQTQVSVLPEGGETPLFRQFFKNWRDPDQTEGLGLAYLSSHIAHVERVPFDAATLHTSTAMAAQHGMDDDGTGQKQ 395 (729)
T ss_dssp TTCCTTCEEEEEETTCCCHHHHTTBTTCCCTTCSSSSSCSCCCGGGTTCCCCCCCTTTGGGCHHHHHHHTCSSCSCSCEE
T ss_pred ccCCCCCeEEEEeCCCCCHHHHHHHhcCCCccccccccccccccccccccccccChHHhccCcccccccccccCCCCcEE
Confidence 99988899999999999999999999999864321 111112222234678899999993 22 3467889999999
Q ss_pred EEEEECCceeecCCcccceeeeccEEEEEeecCCCCcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCCceEEEeec
Q 002853 393 VWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQ 472 (873)
Q Consensus 393 VWrV~~~~~~~lp~~~~G~FysgdcYIvl~ty~~~~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~vq~Rv~Q 472 (873)
||||+++++++||++++|+||+||||||+|||..+++.+|+||||+|++|+++++++||++|++|++.++|+|+|+|++|
T Consensus 396 vWrIe~~~~~~vp~~~~G~Fy~gd~Yivl~ty~~~g~~~~~iyfW~G~~ss~de~g~aa~~~veLd~~lgg~~vq~R~~Q 475 (729)
T 1d0n_A 396 IWRVEGSNKVPVDPATYGQFYGGDSYIILYNYRHGSRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQ 475 (729)
T ss_dssp EEEEETTEEEECCGGGTTEEETTSEEEEEEEEEETTEEEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTSCSEEEEEET
T ss_pred EEEEeCCEEEECChhhccEEcCCcEEEEEEEEecCCCceEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCceEEeccc
Confidence 99999999999999999999999999999999888899999999999999999999999999999999999999999999
Q ss_pred cCCcHHHHhhcC-c-EEEEecCcccccceeeeecccccccccccceEEEEEEecCCCceEEEEeccCCCCcCCCCeEEEE
Q 002853 473 DMEPVQFFLIFQ-S-LIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYCYILQ 550 (873)
Q Consensus 473 GkEp~~Fl~lF~-~-~iI~kGg~~~~~~~~~~~~~~~~~~~~~~~~~Lf~V~g~~~~~~~avqV~~~~ssLnS~d~fIL~ 550 (873)
|+||+|||+||+ + |+|++||.++. + .++....++||||+|+.+.+++++||++.++||||+|||||+
T Consensus 476 g~E~~~Fl~~F~g~~~ii~~Gg~~~~--------~---~~~~~~~~rLf~vrg~~~~~~~~~eV~~~~ssLns~d~fIL~ 544 (729)
T 1d0n_A 476 GKEPAHLMSLFGGKPMIVYKGGTSRE--------G---GQTAPASTRLFQVRASSSGATRAVEIIPKAGALNSNDAFVLK 544 (729)
T ss_dssp TCCCHHHHTTSTTSCEEEESSCCCSS--------C---CCCCCCSSEEEEEEECTTSCEEEEEECCCGGGCCSSSEEEEE
T ss_pred CCCCHHHHHhcCCCeEEEEeCCcccc--------C---ccCCCCCCEEEEEECCCCCceEEEEecCChhhcCcCCeEEEe
Confidence 999999999998 4 89999998641 1 122335689999999988899999999999999999999999
Q ss_pred cCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCceEEeecCCCchhhhhhcCCCCCCCccccc-cC--CCCCCeeEEEEec
Q 002853 551 NGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGSEPEVFWNALGGKSEYPREKEI-KG--FIEDPHLFTCTLT 627 (873)
Q Consensus 551 ~~~~vyvW~G~~ss~~e~~~a~~~a~~l~~~~~~~~v~EG~E~~~FW~~LGg~~~y~~~~~~-~~--~~~~prLF~~s~~ 627 (873)
++++||+|+|++|+.+||++|+.+|+.|... +.+|+||+||++||.+|||+.+|++.... ++ ....||||+||+.
T Consensus 545 ~~~~iyvW~G~~s~~~er~~A~~~a~~l~~~--~~~v~EG~E~~~FW~~LGg~~~y~~~~~~~~~~~~~~~~rLf~~s~~ 622 (729)
T 1d0n_A 545 TPSAAYLWVGAGASEAEKTGAQELLRVLRAQ--PVQVAEGSEPDSFWEALGGKATYRTSPRLKDKKMDAHPPRLFACSNK 622 (729)
T ss_dssp CSSCCBCEECTTCCHHHHHHHHHHHHHHTCC--CCCEETTCCCHHHHHTTTSCCCCCCCCCCSTTHHHHSCCEEEEEECT
T ss_pred cCCeEEEEECCCCCHHHHHHHHHHHHHhccC--cEEEeCCCChHHHHHhcCCCCccCcccccccccccccCCeEEEEEcC
Confidence 9999999999999999999999999999843 77899999999999999999999876433 21 2568999999999
Q ss_pred CCceEEeeec-ccccCCCCCCCEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHHHHHhcccccCCCCCCcEEEecCCCCC
Q 002853 628 EGDLKVKEIY-NFTQDDLTTEDILVLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEP 706 (873)
Q Consensus 628 ~G~~~v~Ei~-~F~Q~DL~~ddv~ILD~~~~IyVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~~~~~~~pi~~V~eG~EP 706 (873)
+|+|.++||. +|+|+||+++|||||||+++||||||++++..||+.||.+|++|+++++. +|++.+||++|.+|.||
T Consensus 623 ~G~~~v~ev~~~f~Q~dL~~~dv~iLD~~~eifvWiG~~a~~~er~~al~~A~~Y~~~~~~--~r~~~~pi~~V~~G~Ep 700 (729)
T 1d0n_A 623 IGRFVIEEVPGEFMQEDLATDDVMLLDTWDQVFVWVGKDSQDEEKTEALTSAKRYIDTDPA--HRDRRTPITVVKQGFEP 700 (729)
T ss_dssp TTCCEEEECCSSCCGGGCCTTSEEEEECSSCEEEEECTTSCHHHHSSHHHHHHHHHHHCTT--CCCTTCCEEEEETTCCC
T ss_pred CCcEEEEEecCcccHhHCCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCcc--cCCCCCcEEEEeCCCCC
Confidence 9999999998 99999999999999999999999999999999999999999999998765 67888999999999999
Q ss_pred hhchhcc-ccCcccccccCCcHHHHHHH
Q 002853 707 PFFTCFF-AWDPLKAKMHGNSFERKLAI 733 (873)
Q Consensus 707 ~~Ft~~F-~Wd~~k~~~~~~s~~~k~~~ 733 (873)
..||++| +||+.++ +|++|++.-+.
T Consensus 701 ~~F~~~F~~Wd~~~~--~~~~~~~~~~~ 726 (729)
T 1d0n_A 701 PSFVGWFLGWDDSYW--SVDPLDRALAE 726 (729)
T ss_dssp HHHHTTCTTCCGGGG--TSCHHHHHHHH
T ss_pred HHHHhhhhhcCcccc--CCccHHHHHHh
Confidence 9999999 9999986 56886654443
No 2
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A
Probab=100.00 E-value=1.7e-84 Score=724.66 Aligned_cols=338 Identities=25% Similarity=0.517 Sum_probs=303.9
Q ss_pred CCCCcccCCcccccCCccccEEEEEEECCeEeecCCCCCCccccCCeEEEEeeeecCCCCCceEEEEEccCCcCchhhhH
Q 002853 1 MSLHSKDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTL 80 (873)
Q Consensus 1 ~~~~~~~~d~~~~g~G~~~gl~iWrIe~~~~~~vp~~~~G~Fy~gdsYIVl~t~~~~~g~~~~~i~~W~G~~ss~de~g~ 80 (873)
|....+++||+|.++|+++|++||||++++++|||++.||+||+||||||||||... .|+||||+|++||+||+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~g~~iWrie~~~~~~vp~~~~G~Fy~gd~Yivl~t~~~~----~~~i~~W~G~~ss~de~~~ 76 (347)
T 1j72_A 1 MYTAIPQSGSPFPGSVQDPGLHVWRVEKLKPVPVAQENQGVFFSGDSYLVLHNGPEE----VSHLHLWIGQQSSRDEQGA 76 (347)
T ss_dssp ----------CCCSTTSSSEEEEEEECSSSEEECCTTTTTEEETTSEEEEEEECSSS----CEEEEEEECTTSCHHHHHH
T ss_pred CccchhhhhhhhhhcccCCCeEEEEEcCCEEEECCHHHcCeecCCCEEEEEEeecCC----CeEEEEEcCCCCCHHHHHH
Confidence 445667889999999999999999999999999999999999999999999999643 2999999999999999999
Q ss_pred HHHHHHHHHHHhCCCceEEEeeccCCcHHHHhhhCCcEEEecCCccCCCCCCCCCc-cceEEEEeeCcceEEEEEecCCC
Q 002853 81 VSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGKSNGET-YKISMLTCKGDHVVRVKEVPFSR 159 (873)
Q Consensus 81 AA~~aveLd~~lgg~~vq~Re~QG~Es~~Fl~~Fk~~ii~~~Gg~~sgf~~~~~~~-~~~rL~~vkG~~~v~~~eV~~s~ 159 (873)
||++|++||++|||+++||||+||+||++||+||+++|+|++||+++||+|++++. ..+|||||+|+++++++|||+++
T Consensus 77 aa~~t~~ld~~lgg~~vq~R~~Qg~Es~~Fl~~F~~~~~i~~Gg~~sgf~~~~~~~~~~~rL~~v~G~~~v~~~eV~~~~ 156 (347)
T 1j72_A 77 CAVLAVQLDDYLGGRPVQHREVQGNESDLFMSYFPRGLKYQEGGVESGFKHVVPNEVVVQRLYQVKGKKNIRATERALNW 156 (347)
T ss_dssp HHHHHHHHHHHTTTCSEEEEEETTSCCHHHHTTCSSCCEEECSSCCTTCCCCCCCCCEEEEEEEEECSSSCEEEEECSSG
T ss_pred HHHHHHHHHHHhCCCCcEEEeeCCCCCHHHHHhhCCCeEEeeCCccccccccccCCCCCcEEEEEECCCceEEEEEeeeH
Confidence 99999999999999999999999999999999999999999999999999987654 56899999999999999999999
Q ss_pred CCccCCCceeeeCCCeEEEEeCCCCCHHHHHHHHHHHHHhhccCCCCceeEEEEcCCccCCCCChhhHHHHcCCCCCCCC
Q 002853 160 SSLNHNDVFIVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPR 239 (873)
Q Consensus 160 sSLns~DvFILd~~~~iyvW~G~~S~~~Er~kA~~va~~ik~~~~~g~~~v~~veeG~~~~~~E~~eFw~~lGg~~~~~~ 239 (873)
+||||+|||||+++++||+|+|++||..||.+|+++|+.|++.++.|+++|++|+||+ |+.+||.+|||+.+++.
T Consensus 157 ~sLns~d~FIL~~~~~iy~W~G~~s~~~Er~~A~~~a~~i~~~~~~g~~~v~~v~EG~-----E~~~Fw~~LGg~~~~~~ 231 (347)
T 1j72_A 157 DSFNTGDCFILDLGQNIFAWCGGKSNILERNKARDLALAIRDSERQGKAQVEIVTDGE-----EPAEMIQVLGPKPALKE 231 (347)
T ss_dssp GGCBTTSEEEEEETTEEEEEECTTCCHHHHHHHHHHHHHHHTTSCCSSCEEEEEETTC-----CCHHHHHHHCSCCCCBC
T ss_pred HHcCCCceEEEecCCEEEEEECCCCCHHHHHHHHHHHHHHHhhccCCCceEEEEeCCC-----CHHHHHHHhCCCccccc
Confidence 9999999999999999999999999999999999999999988888999999999995 88999999999987765
Q ss_pred CCCCCCC--CCCCCCceeEEEE-cCCCCEEEEec---CCCccccCCCCceEEeeCC--CeEEEEecCCCCHHHHHHHHHH
Q 002853 240 DSPSAFQ--QQPDTPSTTFFWI-NLQGKLCQIAA---NSLNKDMLEKDKCYMLDCV--NEVFVWTGRNTSITERRISISA 311 (873)
Q Consensus 240 ~~~~~~~--~~~~~~~~rLy~v-~~~G~l~~~e~---~~~~q~~L~~~~vyILD~g--~eIyVWiG~~as~~erk~Al~~ 311 (873)
....++. +......+|||++ +.+|.+.+.++ .+|+|+||++++||||||+ ++||||+|++|+..||+.|+.+
T Consensus 232 ~~~~~d~~~~~~~~~~~rLy~vs~~~G~~~v~ev~~~~~~~q~~L~s~dv~ILD~g~~~~IyVW~G~~a~~~er~~A~~~ 311 (347)
T 1j72_A 232 GNPEEDLTADKANAQAAALYKVSDATGQMNLTKVADSSPFALELLISDDCFVLDNGLCGKIYIWKGRKANEKERQAALQV 311 (347)
T ss_dssp SCCSSCCTTSSSSSCCCEEEEEECTTSSCEEEEEECSSSBCGGGCCTTSEEEEECGGGSEEEEEECTTCCHHHHHHHHHH
T ss_pred CCcchhhhhhhhcccCCEEEEEECCCCCEEEEeeccCCCCCHHHcCCCCEEEEecCCCcEEEEEeCCCCCHHHHHHHHHH
Confidence 4332211 1223357899987 47899887665 5999999999999999999 9999999999999999999999
Q ss_pred HHHHHHhcCCCCCceEEEecCCccchhhhhhcccCC
Q 002853 312 SEDFLRNQGRTTGTHLTFLTEGLETTVFRSYFDSWP 347 (873)
Q Consensus 312 A~~y~~~~~R~p~t~i~~V~eG~Ep~~Fk~~F~~W~ 347 (873)
|++|++..+||++++|.+|.||.||..||++|.+|+
T Consensus 312 A~~y~~~~~rp~~~~i~~v~eG~Ep~~Fk~~F~~W~ 347 (347)
T 1j72_A 312 AEGFISRMQYAPNTQVEILPQGRESPIFKQFFKDWK 347 (347)
T ss_dssp HHHHHHHHTCCTTCEEEEEETTCCCTTTCCBSTTCC
T ss_pred HHHHHHhcCCCCCCeEEEEcCCCCCHHHHHHhhcCC
Confidence 999999999988999999999999999999999996
No 3
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens}
Probab=100.00 E-value=9.7e-81 Score=697.08 Aligned_cols=341 Identities=31% Similarity=0.586 Sum_probs=273.3
Q ss_pred hHHHhhhhhcCCCCCCC---CccC--CCCccccCCcEEEEEEECCceeecCCcccceeeeccEEEEEeecCCCCcceEEE
Q 002853 360 EKVAAIFKQQGHDVKEL---PEED--FEPYVNCRGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPGNGRDENVI 434 (873)
Q Consensus 360 ~kva~~~~~~~~dv~~l---p~~e--~~~~~d~~g~l~VWrV~~~~~~~lp~~~~G~FysgdcYIvl~ty~~~~~~~~~i 434 (873)
+++|+ +.+..+|+..| |+.. ..+++|++|.|+||||+++.+++||++.||+||+||||||+||| +..|.|
T Consensus 19 ~~~~~-~~~~~~d~~~l~~~~~~~~~~~~~d~g~g~l~vWrIe~~~~~~vp~~~~G~Fy~gD~YIvl~ty----~~~~~i 93 (371)
T 3fg6_A 19 EKVAQ-IKQIPFDASKLHSSPQMAAQHNMVDDGSGKVEIWRVENNGRIQVDQNSYGEFYGGDCYIILYTY----PRGQII 93 (371)
T ss_dssp ----------------------------------CEEEEEEECSSSEEECCGGGTTEECTTCEEEEEEEC----SSCEEE
T ss_pred ccccc-ccccccChhhccCCccchhhccCccCCCCcEEEEEEECCeeeeCChHHcCeEecCceEEEEEEe----cCCeEE
Confidence 44554 46778999998 5442 34688999999999999999999999999999999999999999 457999
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHhccCCceEEEeeccCCcHHHHhhcCc--EEEEecCcccccceeeeeccccccccc
Q 002853 435 YAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQFFLIFQS--LIVFKGGLSTQYKKFIVEEGIVDETYD 512 (873)
Q Consensus 435 y~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~vq~Rv~QGkEp~~Fl~lF~~--~iI~kGg~~~~~~~~~~~~~~~~~~~~ 512 (873)
|||+|++|+++|+++||+++++|++.++|+|+|+|++||+||++||++|++ |+|++||.++++.+. .
T Consensus 94 ~~W~G~~ss~de~g~aa~~~v~Ld~~lgg~~vq~R~~QG~Es~~Fls~Fkg~~~ii~~Gg~~~~~~~~-----------~ 162 (371)
T 3fg6_A 94 YTWQGANATRDELTTSAFLTVQLDRSLGGQAVQIRVSQGKEPVHLLSLFKDKPLIIYKNGTSKKGGQA-----------P 162 (371)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHHHHHTTSCCEEEEEETTCCCHHHHTTSCSSCEEEC-----------------------
T ss_pred EEeeCCCCChhHHHHHHHHHHHHHHHcCCCceEEEEecCCCcHHHHHHhCCceEEEEcCCccCCCccC-----------C
Confidence 999999999999999999999999999999999999999999999999984 899999986543211 1
Q ss_pred ccceEEEEEEecCCCceEEEEeccCCCCcCCCCeEEEEcC-CeEEEEECCCCCHHHHHHHHHHHHHhCCCCceEEeecCC
Q 002853 513 EKKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYCYILQNG-ASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGS 591 (873)
Q Consensus 513 ~~~~~Lf~V~g~~~~~~~avqV~~~~ssLnS~d~fIL~~~-~~vyvW~G~~ss~~e~~~a~~~a~~l~~~~~~~~v~EG~ 591 (873)
...++||||+|+.+.+++++||++.++||||+|||||+++ ++||+|+|++|+..||.+|+.+|+.|+.+ ...|+||+
T Consensus 163 ~~~~rL~~vrg~~~~~vr~~EV~~~~ssLns~d~FILd~~~~~iyvW~G~~ss~~Er~~A~~~a~~i~~~--~~~v~EG~ 240 (371)
T 3fg6_A 163 APPTRLFQVRRNLASITRIVEVDVDANSLNSNDVFVLKLPQNSGYIWVGKGASQEEEKGAEYVASVLKCK--TLRIQEGE 240 (371)
T ss_dssp --CCEEEEEECCSSSCCEEEEECSSGGGCBTTSEEEEECTTSEEEEEECTTCCHHHHHHHHHHHHHTTCE--EEEEETTC
T ss_pred cCccEEEEEeccCCCceEEEEecCCHHHccCCCeEEEEcCCCeEEEEECCCCCHHHHHHHHHHHHHhcCC--eEEEeCCC
Confidence 2457999999998889999999999999999999999999 99999999999999999999999999854 46799999
Q ss_pred CchhhhhhcCCCCCCCccccccCC--CCCCeeEEEEecCCceEEeeec-ccccCCCCCCCEEEEeCCCeEEEEEcCCCCH
Q 002853 592 EPEVFWNALGGKSEYPREKEIKGF--IEDPHLFTCTLTEGDLKVKEIY-NFTQDDLTTEDILVLDCCREIYVWIGCHSDL 668 (873)
Q Consensus 592 E~~~FW~~LGg~~~y~~~~~~~~~--~~~prLF~~s~~~G~~~v~Ei~-~F~Q~DL~~ddv~ILD~~~~IyVWiG~~a~~ 668 (873)
||++||.+|||+..|++.....+. ...||||+||+.+|+|.|+||. +|+|+||+++|||||||+.+||||+|++|+.
T Consensus 241 Ep~~Fw~~LGg~~~~~~~~~~~~~~~~~~~rLf~~s~~~G~~~v~ev~~~f~Q~dL~~~dv~ILD~~~~IfVW~G~~as~ 320 (371)
T 3fg6_A 241 EPEEFWNSLGGKKDYQTSPLLETQAEDHPPRLYGCSNKTGRFVIEEIPGEFTQDDLAEDDVMLLDAWEQIFIWIGKDANE 320 (371)
T ss_dssp CCHHHHHHTTSCCCCBCCTTTSSCCCSSCCEEEEEECTTSSCEEEECCSSCCGGGSCTTSEEEEECSSCEEEEECTTCCH
T ss_pred CCHHHHHHcCCCcccCcchhhcccccccCcEEEEEEcCCCcEEEEEecccccHhHCCCCCEEEEeCCCEEEEEECCCCCH
Confidence 999999999999999875433322 3469999999999999999998 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccccCCCCCCcEEEecCCCCChhchhcc-ccCcccc
Q 002853 669 NSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPPFFTCFF-AWDPLKA 720 (873)
Q Consensus 669 ~ek~~Al~~A~~Yl~~~~~~~~~~~~~pi~~V~eG~EP~~Ft~~F-~Wd~~k~ 720 (873)
.||+.||.+|++||++++. +|++.+||++|.+|.||+.||++| +||+.+|
T Consensus 321 ~Er~~A~~~A~~yi~~~~~--~r~~~t~i~~v~eG~Ep~~Fk~~F~~W~~~~~ 371 (371)
T 3fg6_A 321 VEKKESLKSAKMYLETDPS--GRDKRTPIVIIKQGHEPPTFTGWFLGWDSSKW 371 (371)
T ss_dssp HHHHHHHHHHTTCC------------CCEEEEETTCCCHHHHTTSSSCCTTCC
T ss_pred HHHHHHHHHHHHHHHhCcc--CCCCCCCEEEecCCCCCHHHHhhhccCCcccC
Confidence 9999999999999998764 678889999999999999999999 9999875
No 4
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A
Probab=100.00 E-value=1.4e-79 Score=683.51 Aligned_cols=333 Identities=30% Similarity=0.581 Sum_probs=291.2
Q ss_pred ccccCCcEEEEEEECCceeecCCcccceeeeccEEEEEeecCCCCcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccC
Q 002853 384 YVNCRGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRG 463 (873)
Q Consensus 384 ~~d~~g~l~VWrV~~~~~~~lp~~~~G~FysgdcYIvl~ty~~~~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~ 463 (873)
++||+|+++||||+++.+++||++.+|+||+||||||+|||..+++.++.||||+|++|+++|+++||+++++|++.++|
T Consensus 2 ~ddg~g~~~vwrIe~~~~~~v~~~~~G~Fy~gD~YIvl~ty~~~~~~~~~i~~W~G~~ss~de~~~aa~~~~~ld~~lgg 81 (344)
T 2fh1_A 2 DDDGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYRHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGG 81 (344)
T ss_dssp CSCSCSEEEEEEEETTEEEECCGGGTTEEETTSEEEEEEEEEETTEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTS
T ss_pred ccCCCCCEEEEEEcCCeEEECCHHHcCeecCCCeEEEEEEeecCCCceEEEEEEecCCCCHhHHHHHHHHHHHHHHHhCC
Confidence 67999999999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred CceEEEeeccCCcHHHHhhcCc--EEEEecCccc-ccceeeeecccccccccccceEEEEEEecCCCceEEEEeccCCCC
Q 002853 464 EAVMAQVHQDMEPVQFFLIFQS--LIVFKGGLST-QYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAFQVDRVSTC 540 (873)
Q Consensus 464 ~~vq~Rv~QGkEp~~Fl~lF~~--~iI~kGg~~~-~~~~~~~~~~~~~~~~~~~~~~Lf~V~g~~~~~~~avqV~~~~ss 540 (873)
+++|+|++||+||++||++|++ ++|++||... ++. . ....++||||+|+.+.+++++||++.++|
T Consensus 82 ~~vq~R~~Qg~Es~~Fl~~F~g~~~ii~~gg~~~~~~~---------~---~~~~~rL~~v~g~~~~~~~~~eV~~~~ss 149 (344)
T 2fh1_A 82 TPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQ---------T---APASTRLFQVRANSAGATRAVEVLPKAGA 149 (344)
T ss_dssp CSEEEEEETTCCCHHHHGGGTTCCEEEESCCCCTTTCS---------C---CCCSSEEEEEEECTTCCEEEEEECCSGGG
T ss_pred CceEEEeecCCCCHHHHHhhCCCeEEEEcCCcccCCcc---------C---CCCCceEEEEECCCCCceEEEEecCchhh
Confidence 9999999999999999999996 8899998642 221 1 12357999999998889999999999999
Q ss_pred cCCCCeEEEEcCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCceEEeecCCCchhhhhhcCCCCCCCcccccc---CCCC
Q 002853 541 LNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGSEPEVFWNALGGKSEYPREKEIK---GFIE 617 (873)
Q Consensus 541 LnS~d~fIL~~~~~vyvW~G~~ss~~e~~~a~~~a~~l~~~~~~~~v~EG~E~~~FW~~LGg~~~y~~~~~~~---~~~~ 617 (873)
|||+|||||+++++||+|+|++|+..||.+|..+|+.|+ .++.+|+||+||++||.+|||+..|++..... ....
T Consensus 150 Lns~d~FIL~~~~~iyvW~G~~s~~~er~~A~~~a~~l~--~~i~~v~EG~E~~~Fw~~LGg~~~y~~~~~~~~~~~~~~ 227 (344)
T 2fh1_A 150 LNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQELLRVLR--AQPVQVAEGSEPDGFWEALGGKAAYRTSPRLKDKKMDAH 227 (344)
T ss_dssp CBTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHHHTT--CCCEEEETTCCCHHHHHHTTSCCCCBCCHHHHCSCC--C
T ss_pred cCCCceEEEecCCEEEEEECCCCCHHHHHHHHHHHHHhC--CCcEEEeCCCCcHHHHHhcCCCCcccccccccccccccc
Confidence 999999999999999999999999999999999999995 56788999999999999999999998754332 2247
Q ss_pred CCeeEEEEecCCceEEeeec-ccccCCCCCCCEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHHHHHhcccccCCCCCCc
Q 002853 618 DPHLFTCTLTEGDLKVKEIY-NFTQDDLTTEDILVLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETP 696 (873)
Q Consensus 618 ~prLF~~s~~~G~~~v~Ei~-~F~Q~DL~~ddv~ILD~~~~IyVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~~~~~~~p 696 (873)
.||||+|++.+|+|.++||. +|+|+||+++|||||||+++||||+|++++..||+.||.+|++|++..+. +|++.+|
T Consensus 228 ~~rLf~~s~~~G~~~v~ev~~~f~q~dL~~~dv~iLD~g~~IfVW~G~~as~~er~~A~~~A~~y~~~~~~--~r~~~t~ 305 (344)
T 2fh1_A 228 PPRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPA--NRDRRTP 305 (344)
T ss_dssp CCEEEEEECTTSSCEEEEECSSCCGGGSCTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHHHHHHTC---------CC
T ss_pred CCEEEEEEcCCCCEEEEEccCCcCHhHCCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCcc--CCCCCCc
Confidence 89999999999999999998 99999999999999999999999999999999999999999999998764 6788899
Q ss_pred EEEecCCCCChhchhcc-ccCcccccccCCcHHHHHHHh
Q 002853 697 IYVVTEGHEPPFFTCFF-AWDPLKAKMHGNSFERKLAIL 734 (873)
Q Consensus 697 i~~V~eG~EP~~Ft~~F-~Wd~~k~~~~~~s~~~k~~~~ 734 (873)
|++|.+|.||..||++| +|++.++ ++++|+++++.|
T Consensus 306 i~~V~eG~Ep~~Fk~~F~~W~~~~~--~~~~~~~~~~~~ 342 (344)
T 2fh1_A 306 ITVVKQGFEPPSFVGWFLGWDDDYW--SVDPLDRAMAEL 342 (344)
T ss_dssp EEEEETTCCCHHHHTTSSSCCTTCC--------------
T ss_pred EEEEcCCCCCHHHHHHHhhcChhhc--CCChHHHHHHHh
Confidence 99999999999999999 8999996 578999999876
No 5
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} PDB: 2llf_A
Probab=100.00 E-value=1.7e-82 Score=715.60 Aligned_cols=354 Identities=31% Similarity=0.572 Sum_probs=99.4
Q ss_pred hHHHhhhhhcCCCCCCC---CccCC--CCccccCCcEEEEEEECCceeecCCcccceeeeccEEEEEeecCCCCcceEEE
Q 002853 360 EKVAAIFKQQGHDVKEL---PEEDF--EPYVNCRGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPGNGRDENVI 434 (873)
Q Consensus 360 ~kva~~~~~~~~dv~~l---p~~e~--~~~~d~~g~l~VWrV~~~~~~~lp~~~~G~FysgdcYIvl~ty~~~~~~~~~i 434 (873)
+++|+ ..+..+|+..| |+.+. ..++|++|+|+||||+++++++||++.||+||+||||||+|||..+++.+|.|
T Consensus 29 ~~~ak-~~~~~~d~~~l~~~~~~aa~~~~~dd~~g~l~iWrIe~~~~~~vp~~~~G~Fy~gD~YIvl~ty~~~g~~~~~i 107 (398)
T 3fg7_A 29 GSVAK-VEQVKFDATSMHVKPQVAAQQKMVDDGSGEVQVWRIENLELVPVDSKWLGHFYGGDCYLLLYTYLIGEKQHYLL 107 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceee-ccccccchhhhhcChhHHHHhcCCCCCCCcEEEEEEeCCEEEECChHhcCeecCCCeEEEEEEEecCCcceEEE
Confidence 34543 35668999887 55533 46889999999999999999999999999999999999999998888899999
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHhccCCceEEEeeccCCcHHHHhhcCc-EEEEecCcccccceeeeecccccccccc
Q 002853 435 YAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQFFLIFQS-LIVFKGGLSTQYKKFIVEEGIVDETYDE 513 (873)
Q Consensus 435 y~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~vq~Rv~QGkEp~~Fl~lF~~-~iI~kGg~~~~~~~~~~~~~~~~~~~~~ 513 (873)
|||+|++|+++|+++||.+|++|++.++|+|+|+|++||+||++||++|++ |+|++||.++.. ++...
T Consensus 108 ~~W~G~~ss~de~g~aa~~av~Ld~~lgg~~vq~Re~QG~Es~~Fls~Fkg~iii~~Gg~~~~~-----------~~~~~ 176 (398)
T 3fg7_A 108 YVWQGSQASQDEITASAYQAVILDQKYNGEPVQIRVPMGKEPPHLMSIFKGRMVVYQGGTSRTN-----------NLETG 176 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHhCCceEEEEeecCCCCHHHHHHhCCeEEEeeCCcccCC-----------ccCcc
Confidence 999999999999999999999999999999999999999999999999995 899999986321 11223
Q ss_pred cceEEEEEEecCCCceEEEEeccCCCCcCCCCeEEEEcCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCceEEeecCCCc
Q 002853 514 KKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGSEP 593 (873)
Q Consensus 514 ~~~~Lf~V~g~~~~~~~avqV~~~~ssLnS~d~fIL~~~~~vyvW~G~~ss~~e~~~a~~~a~~l~~~~~~~~v~EG~E~ 593 (873)
..+|||+|+|+.+.+++++||++.++||||+|||||++++.||+|+|++|+..||.+|+.+|+.|.+ .++..|+||+||
T Consensus 177 ~~~rLf~VrG~~~~~~ra~EV~~s~sSLns~d~FILd~~~~iyvW~G~~ss~~Er~~A~~va~~i~~-~~~~~v~EG~Ep 255 (398)
T 3fg7_A 177 PSTRLFQVQGTGANNTKAFEVPARANFLNSNDVFVLKTQSCCYLWCGKGCSGDEREMAKMVADTISR-TEKQVVVEGQEP 255 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcEEEEEECCCCCceEEEEecCCHHHccCCceEEEEeCCeEEEEeCCCCCHHHHHHHHHHHHHhcC-CcEEEEeCCCCc
Confidence 4689999999988899999999999999999999999999999999999999999999999999864 567889999999
Q ss_pred hhhhhhcCCCCCCCccccccC--CCCCCeeEEEEecCCceEEeeecccccCCCCCCCEEEEeCCCeEEEEEcCCCCHHHH
Q 002853 594 EVFWNALGGKSEYPREKEIKG--FIEDPHLFTCTLTEGDLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHSDLNSK 671 (873)
Q Consensus 594 ~~FW~~LGg~~~y~~~~~~~~--~~~~prLF~~s~~~G~~~v~Ei~~F~Q~DL~~ddv~ILD~~~~IyVWiG~~a~~~ek 671 (873)
++||.+|||+.+|++.....+ ....||||+||+.+|+|.|+||.+|+|+||+++|||||||+.+||||+|++|+..||
T Consensus 256 ~~Fw~~LGg~~~~~~~~~~~~~~~~~~~rLf~~s~~~G~~~v~EV~~f~Q~dL~~~dv~ILD~g~~IfVW~G~~as~~Er 335 (398)
T 3fg7_A 256 ANFWMALGGKAPYANTKRLQEENLVITPRLFECSNKTGRFLATEIPDFNQDDLEEDDVFLLDVWDQVFFWIGKHANEEEK 335 (398)
T ss_dssp ----------------------CCCCCCEEEEEECTTSSCEEEECTTCCGGGCCTTSEEEEECSSCEEEEECTTCCHHHH
T ss_pred hhHHHHhCCCccCCChhhhccchhcccCeeEEEEcCCCCEEEEEecccCHHHCCCCCEEEEeCCCEEEEEECCCCCHHHH
Confidence 999999999999986544332 245899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCcEEEecCCCCChhchhcc-ccCcccccccCCcHHH
Q 002853 672 QQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPPFFTCFF-AWDPLKAKMHGNSFER 729 (873)
Q Consensus 672 ~~Al~~A~~Yl~~~~~~~~~~~~~pi~~V~eG~EP~~Ft~~F-~Wd~~k~~~~~~s~~~ 729 (873)
+.||.+|++||+.++. ++++.+||.+|.+|.||..||++| +||+.++.. +.||+.
T Consensus 336 ~~Al~~A~~yi~~~~~--~r~~~tpi~~V~eG~Ep~~Fk~~F~~Wd~~~~~~-~~~~~~ 391 (398)
T 3fg7_A 336 KAAATTAQEYLKTHPS--GRDPETPIIVVKQGHEPPTFTGWFLAWDPFKWSG-IHVVPN 391 (398)
T ss_dssp HHHHHHHHHHHHHSSS--SCCTTCCEEEEETTCCCHHHHTTSSCCCTTCC---------
T ss_pred HHHHHHHHHHHHhCcc--cCCCCCCEEEEcCCCCCHHHHHhhhcCChhhhcc-cCCHHH
Confidence 9999999999998865 678889999999999999999999 999999974 788876
No 6
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-78 Score=679.81 Aligned_cols=322 Identities=26% Similarity=0.499 Sum_probs=265.3
Q ss_pred CCCCcccCCcccccCCccccEEEEEEECCeEeecCCCCCCccccCCeEEEEeeeecCCCCCceEEEEEccCCcCchhhhH
Q 002853 1 MSLHSKDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTL 80 (873)
Q Consensus 1 ~~~~~~~~d~~~~g~G~~~gl~iWrIe~~~~~~vp~~~~G~Fy~gdsYIVl~t~~~~~g~~~~~i~~W~G~~ss~de~g~ 80 (873)
|+..+..+|. |.| +|+||||++++++|||++.||+||+|||||||||| +..|+||||+|++||+||+|+
T Consensus 40 ~~~~~~~~d~---g~g---~l~vWrIe~~~~~~vp~~~~G~Fy~gD~YIvl~ty-----~~~~~i~~W~G~~ss~de~g~ 108 (371)
T 3fg6_A 40 MAAQHNMVDD---GSG---KVEIWRVENNGRIQVDQNSYGEFYGGDCYIILYTY-----PRGQIIYTWQGANATRDELTT 108 (371)
T ss_dssp ---------------C---EEEEEEECSSSEEECCGGGTTEECTTCEEEEEEEC-----SSCEEEEEEECTTCCHHHHHH
T ss_pred chhhccCccC---CCC---cEEEEEEECCeeeeCChHHcCeEecCceEEEEEEe-----cCCeEEEEeeCCCCChhHHHH
Confidence 4445555554 566 89999999999999999999999999999999999 246999999999999999999
Q ss_pred HHHHHHHHHHHhCCCceEEEeeccCCcHHHHhhhCCc-EEEecCCccCCCCCCCCCccceEEEEeeCc--ceEEEEEecC
Q 002853 81 VSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPC-IIPLDGKYSLRSGKSNGETYKISMLTCKGD--HVVRVKEVPF 157 (873)
Q Consensus 81 AA~~aveLd~~lgg~~vq~Re~QG~Es~~Fl~~Fk~~-ii~~~Gg~~sgf~~~~~~~~~~rL~~vkG~--~~v~~~eV~~ 157 (873)
||++|++||++|||+|+||||+||+||++||+||+++ ||+++||+++++.+. ....+|||||+|+ +++++.|||+
T Consensus 109 aa~~~v~Ld~~lgg~~vq~R~~QG~Es~~Fls~Fkg~~~ii~~Gg~~~~~~~~--~~~~~rL~~vrg~~~~~vr~~EV~~ 186 (371)
T 3fg6_A 109 SAFLTVQLDRSLGGQAVQIRVSQGKEPVHLLSLFKDKPLIIYKNGTSKKGGQA--PAPPTRLFQVRRNLASITRIVEVDV 186 (371)
T ss_dssp HHHHHHHHHHHTTSCCEEEEEETTCCCHHHHTTSCSSCEEEC----------------CCEEEEEECCSSSCCEEEEECS
T ss_pred HHHHHHHHHHHcCCCceEEEEecCCCcHHHHHHhCCceEEEEcCCccCCCccC--CcCccEEEEEeccCCCceEEEEecC
Confidence 9999999999999999999999999999999999998 899999987655432 3346899999998 5799999999
Q ss_pred CCCCccCCCceeeeCC-CeEEEEeCCCCCHHHHHHHHHHHHHhhccCCCCceeEEEEcCCccCCCCChhhHHHHcCCCCC
Q 002853 158 SRSSLNHNDVFIVDTA-SKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAP 236 (873)
Q Consensus 158 s~sSLns~DvFILd~~-~~iyvW~G~~S~~~Er~kA~~va~~ik~~~~~g~~~v~~veeG~~~~~~E~~eFw~~lGg~~~ 236 (873)
+++||||+|||||+++ ++||+|+|++||..||.+|+++|+.|+.. +.+|+||. |+++||++|||+.+
T Consensus 187 ~~ssLns~d~FILd~~~~~iyvW~G~~ss~~Er~~A~~~a~~i~~~-------~~~v~EG~-----Ep~~Fw~~LGg~~~ 254 (371)
T 3fg6_A 187 DANSLNSNDVFVLKLPQNSGYIWVGKGASQEEEKGAEYVASVLKCK-------TLRIQEGE-----EPEEFWNSLGGKKD 254 (371)
T ss_dssp SGGGCBTTSEEEEECTTSEEEEEECTTCCHHHHHHHHHHHHHTTCE-------EEEEETTC-----CCHHHHHHTTSCCC
T ss_pred CHHHccCCCeEEEEcCCCeEEEEECCCCCHHHHHHHHHHHHHhcCC-------eEEEeCCC-----CCHHHHHHcCCCcc
Confidence 9999999999999999 99999999999999999999999999742 36788984 88999999999988
Q ss_pred CCCCCCCCCCCCCCCCceeEEEE-cCCCCEEEEecC-CCccccCCCCceEEeeCCCeEEEEecCCCCHHHHHHHHHHHHH
Q 002853 237 IPRDSPSAFQQQPDTPSTTFFWI-NLQGKLCQIAAN-SLNKDMLEKDKCYMLDCVNEVFVWTGRNTSITERRISISASED 314 (873)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~rLy~v-~~~G~l~~~e~~-~~~q~~L~~~~vyILD~g~eIyVWiG~~as~~erk~Al~~A~~ 314 (873)
++.... .........+|||++ +.+|.|.+.|+. +|+|+||++++||||||+.+||||+|++|+..||+.||.+|++
T Consensus 255 ~~~~~~--~~~~~~~~~~rLf~~s~~~G~~~v~ev~~~f~Q~dL~~~dv~ILD~~~~IfVW~G~~as~~Er~~A~~~A~~ 332 (371)
T 3fg6_A 255 YQTSPL--LETQAEDHPPRLYGCSNKTGRFVIEEIPGEFTQDDLAEDDVMLLDAWEQIFIWIGKDANEVEKKESLKSAKM 332 (371)
T ss_dssp CBCCTT--TSSCCCSSCCEEEEEECTTSSCEEEECCSSCCGGGSCTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHTT
T ss_pred cCcchh--hcccccccCcEEEEEEcCCCcEEEEEecccccHhHCCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHH
Confidence 765322 122233457899966 578999888876 9999999999999999999999999999999999999999999
Q ss_pred HHHhc--CCCCCceEEEecCCccchhhhhhcccCCCC
Q 002853 315 FLRNQ--GRTTGTHLTFLTEGLETTVFRSYFDSWPQI 349 (873)
Q Consensus 315 y~~~~--~R~p~t~i~~V~eG~Ep~~Fk~~F~~W~~~ 349 (873)
|++.. +||+.+||++|.||.||..||++|++|++.
T Consensus 333 yi~~~~~~r~~~t~i~~v~eG~Ep~~Fk~~F~~W~~~ 369 (371)
T 3fg6_A 333 YLETDPSGRDKRTPIVIIKQGHEPPTFTGWFLGWDSS 369 (371)
T ss_dssp CC----------CCEEEEETTCCCHHHHTTSSSCCTT
T ss_pred HHHhCccCCCCCCCEEEecCCCCCHHHHhhhccCCcc
Confidence 99987 687789999999999999999999999974
No 7
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} PDB: 2llf_A
Probab=100.00 E-value=2.7e-79 Score=689.65 Aligned_cols=319 Identities=27% Similarity=0.477 Sum_probs=94.6
Q ss_pred cCCccccEEEEEEECCeEeecCCCCCCccccCCeEEEEeeeecCCCCCceEEEEEccCCcCchhhhHHHHHHHHHHHHhC
Q 002853 14 GAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKALELDAALG 93 (873)
Q Consensus 14 g~G~~~gl~iWrIe~~~~~~vp~~~~G~Fy~gdsYIVl~t~~~~~g~~~~~i~~W~G~~ss~de~g~AA~~aveLd~~lg 93 (873)
|.| +++||||++++++|||++.||+||+||||||||||. .+|+.+|+||||+|++||+||+|+||++|++||+.||
T Consensus 60 ~~g---~l~iWrIe~~~~~~vp~~~~G~Fy~gD~YIvl~ty~-~~g~~~~~i~~W~G~~ss~de~g~aa~~av~Ld~~lg 135 (398)
T 3fg7_A 60 GSG---EVQVWRIENLELVPVDSKWLGHFYGGDCYLLLYTYL-IGEKQHYLLYVWQGSQASQDEITASAYQAVILDQKYN 135 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCC---cEEEEEEeCCEEEECChHhcCeecCCCeEEEEEEEe-cCCcceEEEEEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence 566 799999999999999999999999999999999997 5678899999999999999999999999999999999
Q ss_pred CCceEEEeeccCCcHHHHhhhCCcEEEecCCccCCCCCCCCCccceEEEEeeCcc--eEEEEEecCCCCCccCCCceeee
Q 002853 94 SCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGKSNGETYKISMLTCKGDH--VVRVKEVPFSRSSLNHNDVFIVD 171 (873)
Q Consensus 94 g~~vq~Re~QG~Es~~Fl~~Fk~~ii~~~Gg~~sgf~~~~~~~~~~rL~~vkG~~--~v~~~eV~~s~sSLns~DvFILd 171 (873)
|+|+|+||+||+||++||+||+++|||++||+++... +.....+|||||+|++ ++++.|||++++||||+|||||+
T Consensus 136 g~~vq~Re~QG~Es~~Fls~Fkg~iii~~Gg~~~~~~--~~~~~~~rLf~VrG~~~~~~ra~EV~~s~sSLns~d~FILd 213 (398)
T 3fg7_A 136 GEPVQIRVPMGKEPPHLMSIFKGRMVVYQGGTSRTNN--LETGPSTRLFQVQGTGANNTKAFEVPARANFLNSNDVFVLK 213 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEeecCCCCHHHHHHhCCeEEEeeCCcccCCc--cCccCCcEEEEEECCCCCceEEEEecCCHHHccCCceEEEE
Confidence 9999999999999999999999999999999885322 1233468999999997 68999999999999999999999
Q ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHhhccCCCCceeEEEEcCCccCCCCChhhHHHHcCCCCCCCCCCCCCCCCCCCC
Q 002853 172 TASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRDSPSAFQQQPDT 251 (873)
Q Consensus 172 ~~~~iyvW~G~~S~~~Er~kA~~va~~ik~~~~~g~~~v~~veeG~~~~~~E~~eFw~~lGg~~~~~~~~~~~~~~~~~~ 251 (873)
+++.||+|+|++||..||.+|+++|+.|++ +++.+|+||. |+.+||.+|||+.+++..... ......
T Consensus 214 ~~~~iyvW~G~~ss~~Er~~A~~va~~i~~------~~~~~v~EG~-----Ep~~Fw~~LGg~~~~~~~~~~--~~~~~~ 280 (398)
T 3fg7_A 214 TQSCCYLWCGKGCSGDEREMAKMVADTISR------TEKQVVVEGQ-----EPANFWMALGGKAPYANTKRL--QEENLV 280 (398)
T ss_dssp -----------------------------------------------------------------------------CCC
T ss_pred eCCeEEEEeCCCCCHHHHHHHHHHHHHhcC------CcEEEEeCCC-----CchhHHHHhCCCccCCChhhh--ccchhc
Confidence 999999999999999999999999999963 5778899994 889999999999877542211 112224
Q ss_pred CceeEEEE-cCCCCEEEEecCCCccccCCCCceEEeeCCCeEEEEecCCCCHHHHHHHHHHHHHHHHhc--CCCCCceEE
Q 002853 252 PSTTFFWI-NLQGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNTSITERRISISASEDFLRNQ--GRTTGTHLT 328 (873)
Q Consensus 252 ~~~rLy~v-~~~G~l~~~e~~~~~q~~L~~~~vyILD~g~eIyVWiG~~as~~erk~Al~~A~~y~~~~--~R~p~t~i~ 328 (873)
..+|||++ +.+|.+.+.|+.+|+|+||++++|||||||.+||||+|++|+..||+.||.+|++|++.. +|++.+||.
T Consensus 281 ~~~rLf~~s~~~G~~~v~EV~~f~Q~dL~~~dv~ILD~g~~IfVW~G~~as~~Er~~Al~~A~~yi~~~~~~r~~~tpi~ 360 (398)
T 3fg7_A 281 ITPRLFECSNKTGRFLATEIPDFNQDDLEEDDVFLLDVWDQVFFWIGKHANEEEKKAAATTAQEYLKTHPSGRDPETPII 360 (398)
T ss_dssp CCCEEEEEECTTSSCEEEECTTCCGGGCCTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHHHHHHHSSSSCCTTCCEE
T ss_pred ccCeeEEEEcCCCCEEEEEecccCHHHCCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCcccCCCCCCEE
Confidence 57899966 678999999999999999999999999999999999999999999999999999999987 787889999
Q ss_pred EecCCccchhhhhhcccCCCCCC
Q 002853 329 FLTEGLETTVFRSYFDSWPQIAE 351 (873)
Q Consensus 329 ~V~eG~Ep~~Fk~~F~~W~~~~~ 351 (873)
+|.||.||..||++|++|+...-
T Consensus 361 ~V~eG~Ep~~Fk~~F~~Wd~~~~ 383 (398)
T 3fg7_A 361 VVKQGHEPPTFTGWFLAWDPFKW 383 (398)
T ss_dssp EEETTCCCHHHHTTSSCCCTTCC
T ss_pred EEcCCCCCHHHHHhhhcCChhhh
Confidence 99999999999999999997643
No 8
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A
Probab=100.00 E-value=3.3e-76 Score=656.42 Aligned_cols=318 Identities=25% Similarity=0.452 Sum_probs=280.2
Q ss_pred ccCCccccEEEEEEECCeEeecCCCCCCccccCCeEEEEeeeecCCCCCceEEEEEccCCcCchhhhHHHHHHHHHHHHh
Q 002853 13 EGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKALELDAAL 92 (873)
Q Consensus 13 ~g~G~~~gl~iWrIe~~~~~~vp~~~~G~Fy~gdsYIVl~t~~~~~g~~~~~i~~W~G~~ss~de~g~AA~~aveLd~~l 92 (873)
+|.| +++||||+++++++||++.||+||+||||||||||.. +++..|+||||+|++||+||+|+||++|++||++|
T Consensus 4 dg~g---~~~vwrIe~~~~~~v~~~~~G~Fy~gD~YIvl~ty~~-~~~~~~~i~~W~G~~ss~de~~~aa~~~~~ld~~l 79 (344)
T 2fh1_A 4 DGTG---QKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYRH-GGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEEL 79 (344)
T ss_dssp CSCS---EEEEEEEETTEEEECCGGGTTEEETTSEEEEEEEEEE-TTEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCC---CEEEEEEcCCeEEECCHHHcCeecCCCeEEEEEEeec-CCCceEEEEEEecCCCCHhHHHHHHHHHHHHHHHh
Confidence 6888 8999999999999999999999999999999999975 45579999999999999999999999999999999
Q ss_pred CCCceEEEeeccCCcHHHHhhhCCc-EEEecCC-ccCCCCCCCCCccceEEEEeeCcc--eEEEEEecCCCCCccCCCce
Q 002853 93 GSCTVQYREVQGQETEKFLSYFRPC-IIPLDGK-YSLRSGKSNGETYKISMLTCKGDH--VVRVKEVPFSRSSLNHNDVF 168 (873)
Q Consensus 93 gg~~vq~Re~QG~Es~~Fl~~Fk~~-ii~~~Gg-~~sgf~~~~~~~~~~rL~~vkG~~--~v~~~eV~~s~sSLns~DvF 168 (873)
||+++||||+||+||++||+||++. +|+++|| ..+++. .....+|||||+|++ .+++.|||++++||||+|||
T Consensus 80 gg~~vq~R~~Qg~Es~~Fl~~F~g~~~ii~~gg~~~~~~~---~~~~~~rL~~v~g~~~~~~~~~eV~~~~ssLns~d~F 156 (344)
T 2fh1_A 80 GGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQ---TAPASTRLFQVRANSAGATRAVEVLPKAGALNSNDAF 156 (344)
T ss_dssp TSCSEEEEEETTCCCHHHHGGGTTCCEEEESCCCCTTTCS---CCCCSSEEEEEEECTTCCEEEEEECCSGGGCBTTSEE
T ss_pred CCCceEEEeecCCCCHHHHHhhCCCeEEEEcCCcccCCcc---CCCCCceEEEEECCCCCceEEEEecCchhhcCCCceE
Confidence 9999999999999999999999985 6666776 445553 233568999999987 79999999999999999999
Q ss_pred eeeCCCeEEEEeCCCCCHHHHHHHHHHHHHhhccCCCCceeEEEEcCCccCCCCChhhHHHHcCCCCCCCCCCCCCCCCC
Q 002853 169 IVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRDSPSAFQQQ 248 (873)
Q Consensus 169 ILd~~~~iyvW~G~~S~~~Er~kA~~va~~ik~~~~~g~~~v~~veeG~~~~~~E~~eFw~~lGg~~~~~~~~~~~~~~~ 248 (873)
||+++++||+|+|++|+..||.+|+++|+.|+ +++.+|+||. |+++||++|||+.+++......+ ..
T Consensus 157 IL~~~~~iyvW~G~~s~~~er~~A~~~a~~l~-------~~i~~v~EG~-----E~~~Fw~~LGg~~~y~~~~~~~~-~~ 223 (344)
T 2fh1_A 157 VLKTPSAAYLWVGTGASEAEKTGAQELLRVLR-------AQPVQVAEGS-----EPDGFWEALGGKAAYRTSPRLKD-KK 223 (344)
T ss_dssp EEECSSCEEEEECTTCCHHHHHHHHHHHHHTT-------CCCEEEETTC-----CCHHHHHHTTSCCCCBCCHHHHC-SC
T ss_pred EEecCCEEEEEECCCCCHHHHHHHHHHHHHhC-------CCcEEEeCCC-----CcHHHHHhcCCCCcccccccccc-cc
Confidence 99999999999999999999999999999983 5678899994 88899999999987765322111 12
Q ss_pred CCCCceeEEEE-cCCCCEEEEecC-CCccccCCCCceEEeeCCCeEEEEecCCCCHHHHHHHHHHHHHHHHhc--CCCCC
Q 002853 249 PDTPSTTFFWI-NLQGKLCQIAAN-SLNKDMLEKDKCYMLDCVNEVFVWTGRNTSITERRISISASEDFLRNQ--GRTTG 324 (873)
Q Consensus 249 ~~~~~~rLy~v-~~~G~l~~~e~~-~~~q~~L~~~~vyILD~g~eIyVWiG~~as~~erk~Al~~A~~y~~~~--~R~p~ 324 (873)
.....+|||++ +.+|.+.+.|+. +|+|+||++++||||||+++||||+|++|+..||+.||.+|++|++.. +||+.
T Consensus 224 ~~~~~~rLf~~s~~~G~~~v~ev~~~f~q~dL~~~dv~iLD~g~~IfVW~G~~as~~er~~A~~~A~~y~~~~~~~r~~~ 303 (344)
T 2fh1_A 224 MDAHPPRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRR 303 (344)
T ss_dssp C--CCCEEEEEECTTSSCEEEEECSSCCGGGSCTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHHHHHHTC-------
T ss_pred ccccCCEEEEEEcCCCCEEEEEccCCcCHhHCCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCccCCCCC
Confidence 23467899976 578999888876 999999999999999999999999999999999999999999999987 89888
Q ss_pred ceEEEecCCccchhhhhhcccCCCCC
Q 002853 325 THLTFLTEGLETTVFRSYFDSWPQIA 350 (873)
Q Consensus 325 t~i~~V~eG~Ep~~Fk~~F~~W~~~~ 350 (873)
+||++|.||.||..||++|++|++..
T Consensus 304 t~i~~V~eG~Ep~~Fk~~F~~W~~~~ 329 (344)
T 2fh1_A 304 TPITVVKQGFEPPSFVGWFLGWDDDY 329 (344)
T ss_dssp CCEEEEETTCCCHHHHTTSSSCCTTC
T ss_pred CcEEEEcCCCCCHHHHHHHhhcChhh
Confidence 99999999999999999999999875
No 9
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A
Probab=100.00 E-value=1.3e-73 Score=636.97 Aligned_cols=312 Identities=24% Similarity=0.418 Sum_probs=285.2
Q ss_pred CCcEEEEEEECCceeecCCcccceeeeccEEEEEeecCCCCcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCCceE
Q 002853 388 RGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVM 467 (873)
Q Consensus 388 ~g~l~VWrV~~~~~~~lp~~~~G~FysgdcYIvl~ty~~~~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~vq 467 (873)
+..|+||||+++.+++||++.||+||+||||||+|||...+ |.||||+|++|+++|+++||.+|++|++.++|+|+|
T Consensus 18 ~~g~~iWrie~~~~~~vp~~~~G~Fy~gd~Yivl~t~~~~~---~~i~~W~G~~ss~de~~~aa~~t~~ld~~lgg~~vq 94 (347)
T 1j72_A 18 DPGLHVWRVEKLKPVPVAQENQGVFFSGDSYLVLHNGPEEV---SHLHLWIGQQSSRDEQGACAVLAVQLDDYLGGRPVQ 94 (347)
T ss_dssp SSEEEEEEECSSSEEECCTTTTTEEETTSEEEEEEECSSSC---EEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTCSEE
T ss_pred CCCeEEEEEcCCEEEECCHHHcCeecCCCEEEEEEeecCCC---eEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 45799999999999999999999999999999999997543 999999999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHhhcCc-EEEEecCcccccceeeeecccccccccccceEEEEEEecCCCceEEEEeccCCCCcCCCCe
Q 002853 468 AQVHQDMEPVQFFLIFQS-LIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYC 546 (873)
Q Consensus 468 ~Rv~QGkEp~~Fl~lF~~-~iI~kGg~~~~~~~~~~~~~~~~~~~~~~~~~Lf~V~g~~~~~~~avqV~~~~ssLnS~d~ 546 (873)
+|++||+||++||++|++ ++|++||.++||+++..+ ....++||||+|+ .+++++||++.++||||+||
T Consensus 95 ~R~~Qg~Es~~Fl~~F~~~~~i~~Gg~~sgf~~~~~~--------~~~~~rL~~v~G~--~~v~~~eV~~~~~sLns~d~ 164 (347)
T 1j72_A 95 HREVQGNESDLFMSYFPRGLKYQEGGVESGFKHVVPN--------EVVVQRLYQVKGK--KNIRATERALNWDSFNTGDC 164 (347)
T ss_dssp EEEETTSCCHHHHTTCSSCCEEECSSCCTTCCCCCCC--------CCEEEEEEEEECS--SSCEEEEECSSGGGCBTTSE
T ss_pred EEeeCCCCCHHHHHhhCCCeEEeeCCccccccccccC--------CCCCcEEEEEECC--CceEEEEEeeeHHHcCCCce
Confidence 999999999999999995 999999999999875321 1135799999997 58999999999999999999
Q ss_pred EEEEcCCeEEEEECCCCCHHHHHHHHHHHHHhC-----CCCceEEeecCCCchhhhhhcCCCCCCCccccc------cCC
Q 002853 547 YILQNGASVFTWIGNLSSSRDHDLLDRMVELIN-----PTWQPISVREGSEPEVFWNALGGKSEYPREKEI------KGF 615 (873)
Q Consensus 547 fIL~~~~~vyvW~G~~ss~~e~~~a~~~a~~l~-----~~~~~~~v~EG~E~~~FW~~LGg~~~y~~~~~~------~~~ 615 (873)
|||++++.||+|+|+.|+..||.+|+.+|+.|+ ...++..+.||+||++||.+|||+..|+..... ...
T Consensus 165 FIL~~~~~iy~W~G~~s~~~Er~~A~~~a~~i~~~~~~g~~~v~~v~EG~E~~~Fw~~LGg~~~~~~~~~~~d~~~~~~~ 244 (347)
T 1j72_A 165 FILDLGQNIFAWCGGKSNILERNKARDLALAIRDSERQGKAQVEIVTDGEEPAEMIQVLGPKPALKEGNPEEDLTADKAN 244 (347)
T ss_dssp EEEEETTEEEEEECTTCCHHHHHHHHHHHHHHHTTSCCSSCEEEEEETTCCCHHHHHHHCSCCCCBCSCCSSCCTTSSSS
T ss_pred EEEecCCEEEEEECCCCCHHHHHHHHHHHHHHHhhccCCCceEEEEeCCCCHHHHHHHhCCCcccccCCcchhhhhhhhc
Confidence 999999999999999999999999999999995 235688999999999999999999888755431 122
Q ss_pred CCCCeeEEEEecCCceEEeee---cccccCCCCCCCEEEEeCC--CeEEEEEcCCCCHHHHHHHHHHHHHHHHhcccccC
Q 002853 616 IEDPHLFTCTLTEGDLKVKEI---YNFTQDDLTTEDILVLDCC--REIYVWIGCHSDLNSKQQALNIGQKFLETDILVEG 690 (873)
Q Consensus 616 ~~~prLF~~s~~~G~~~v~Ei---~~F~Q~DL~~ddv~ILD~~--~~IyVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~~ 690 (873)
...||||+|++.+|++.++|| .+|+|+||+++|||||||+ ++||||+|++++..||+.|+.+|++|++.. +
T Consensus 245 ~~~~rLy~vs~~~G~~~v~ev~~~~~~~q~~L~s~dv~ILD~g~~~~IyVW~G~~a~~~er~~A~~~A~~y~~~~----~ 320 (347)
T 1j72_A 245 AQAAALYKVSDATGQMNLTKVADSSPFALELLISDDCFVLDNGLCGKIYIWKGRKANEKERQAALQVAEGFISRM----Q 320 (347)
T ss_dssp SCCCEEEEEECTTSSCEEEEEECSSSBCGGGCCTTSEEEEECGGGSEEEEEECTTCCHHHHHHHHHHHHHHHHHH----T
T ss_pred ccCCEEEEEECCCCCEEEEeeccCCCCCHHHcCCCCEEEEecCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHhc----C
Confidence 357999999999999999999 5999999999999999999 999999999999999999999999999874 6
Q ss_pred CCCCCcEEEecCCCCChhchhcc-ccC
Q 002853 691 LSLETPIYVVTEGHEPPFFTCFF-AWD 716 (873)
Q Consensus 691 ~~~~~pi~~V~eG~EP~~Ft~~F-~Wd 716 (873)
|++++||.+|.||.||..|+.+| +|+
T Consensus 321 rp~~~~i~~v~eG~Ep~~Fk~~F~~W~ 347 (347)
T 1j72_A 321 YAPNTQVEILPQGRESPIFKQFFKDWK 347 (347)
T ss_dssp CCTTCEEEEEETTCCCTTTCCBSTTCC
T ss_pred CCCCCeEEEEcCCCCCHHHHHHhhcCC
Confidence 78899999999999999999999 896
No 10
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G*
Probab=100.00 E-value=7.1e-72 Score=675.21 Aligned_cols=315 Identities=24% Similarity=0.438 Sum_probs=285.9
Q ss_pred cEEEEEEECCeEeecCCCCCCccccCCeEEEEeeeecCCCCCceEEEEEccCCcCchhhhHHHHHHHHHHHHhCCCceEE
Q 002853 20 GLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTVQY 99 (873)
Q Consensus 20 gl~iWrIe~~~~~~vp~~~~G~Fy~gdsYIVl~t~~~~~g~~~~~i~~W~G~~ss~de~g~AA~~aveLd~~lgg~~vq~ 99 (873)
+++||||+++++++||++.||+||+||||||||||. .+|+.+|+||||+|++||+||+|+||++|++||+.|||+++|+
T Consensus 393 ~l~vWrIe~~~~~~vp~~~~G~Fy~gd~Yivl~ty~-~~g~~~~~iyfW~G~~ss~de~g~aa~~~veLd~~lgg~~vq~ 471 (729)
T 1d0n_A 393 QKQIWRVEGSNKVPVDPATYGQFYGGDSYIILYNYR-HGSRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQS 471 (729)
T ss_dssp CEEEEEEETTEEEECCGGGTTEEETTSEEEEEEEEE-ETTEEEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTSCSEEE
T ss_pred cEEEEEEeCCEEEECChhhccEEcCCcEEEEEEEEe-cCCCceEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCceEE
Confidence 899999999999999999999999999999999995 4678899999999999999999999999999999999999999
Q ss_pred EeeccCCcHHHHhhhCCc-EEEecCCccCCCCCCCCCccceEEEEeeCcc--eEEEEEecCCCCCccCCCceeeeCCCeE
Q 002853 100 REVQGQETEKFLSYFRPC-IIPLDGKYSLRSGKSNGETYKISMLTCKGDH--VVRVKEVPFSRSSLNHNDVFIVDTASKI 176 (873)
Q Consensus 100 Re~QG~Es~~Fl~~Fk~~-ii~~~Gg~~sgf~~~~~~~~~~rL~~vkG~~--~v~~~eV~~s~sSLns~DvFILd~~~~i 176 (873)
|++||+||++||+||+|+ |||++||+++ ++++.....+|||||+|++ .+++.|||++++||||+|||||+++++|
T Consensus 472 R~~Qg~E~~~Fl~~F~g~~~ii~~Gg~~~--~~~~~~~~~~rLf~vrg~~~~~~~~~eV~~~~ssLns~d~fIL~~~~~i 549 (729)
T 1d0n_A 472 RVVQGKEPAHLMSLFGGKPMIVYKGGTSR--EGGQTAPASTRLFQVRASSSGATRAVEIIPKAGALNSNDAFVLKTPSAA 549 (729)
T ss_dssp EEETTCCCHHHHTTSTTSCEEEESSCCCS--SCCCCCCCSSEEEEEEECTTSCEEEEEECCCGGGCCSSSEEEEECSSCC
T ss_pred ecccCCCCHHHHHhcCCCeEEEEeCCccc--cCccCCCCCCEEEEEECCCCCceEEEEecCChhhcCcCCeEEEecCCeE
Confidence 999999999999999999 9999999876 3344445678999999996 6999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHhhccCCCCceeEEEEcCCccCCCCChhhHHHHcCCCCCCCCCCCCCCCCCCCCCceeE
Q 002853 177 FLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRDSPSAFQQQPDTPSTTF 256 (873)
Q Consensus 177 yvW~G~~S~~~Er~kA~~va~~ik~~~~~g~~~v~~veeG~~~~~~E~~eFw~~lGg~~~~~~~~~~~~~~~~~~~~~rL 256 (873)
|+|+|++|+..||.+|+++|+.|+. ++.+|+||+ |+++||.+|||+.+|++..... ........+||
T Consensus 550 yvW~G~~s~~~er~~A~~~a~~l~~-------~~~~v~EG~-----E~~~FW~~LGg~~~y~~~~~~~-~~~~~~~~~rL 616 (729)
T 1d0n_A 550 YLWVGAGASEAEKTGAQELLRVLRA-------QPVQVAEGS-----EPDSFWEALGGKATYRTSPRLK-DKKMDAHPPRL 616 (729)
T ss_dssp BCEECTTCCHHHHHHHHHHHHHHTC-------CCCCEETTC-----CCHHHHHTTTSCCCCCCCCCCS-TTHHHHSCCEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHhcc-------CcEEEeCCC-----ChHHHHHhcCCCCccCcccccc-cccccccCCeE
Confidence 9999999999999999999999972 267789994 8999999999998887543210 11112457999
Q ss_pred EEE-cCCCCEEEEecC-CCccccCCCCceEEeeCCCeEEEEecCCCCHHHHHHHHHHHHHHHHh--cCCCCCceEEEecC
Q 002853 257 FWI-NLQGKLCQIAAN-SLNKDMLEKDKCYMLDCVNEVFVWTGRNTSITERRISISASEDFLRN--QGRTTGTHLTFLTE 332 (873)
Q Consensus 257 y~v-~~~G~l~~~e~~-~~~q~~L~~~~vyILD~g~eIyVWiG~~as~~erk~Al~~A~~y~~~--~~R~p~t~i~~V~e 332 (873)
|++ +.+|.|.+.|+. +|+|+||++++||||||+++||||+|++|+..||+.||.+|++|++. .+|++.+||++|.+
T Consensus 617 f~~s~~~G~~~v~ev~~~f~Q~dL~~~dv~iLD~~~eifvWiG~~a~~~er~~al~~A~~Y~~~~~~~r~~~~pi~~V~~ 696 (729)
T 1d0n_A 617 FACSNKIGRFVIEEVPGEFMQEDLATDDVMLLDTWDQVFVWVGKDSQDEEKTEALTSAKRYIDTDPAHRDRRTPITVVKQ 696 (729)
T ss_dssp EEEECTTTCCEEEECCSSCCGGGCCTTSEEEEECSSCEEEEECTTSCHHHHSSHHHHHHHHHHHCTTCCCTTCCEEEEET
T ss_pred EEEEcCCCcEEEEEecCcccHhHCCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCcccCCCCCcEEEEeC
Confidence 966 578999999987 99999999999999999999999999999999999999999999997 47877899999999
Q ss_pred CccchhhhhhcccCCCCC
Q 002853 333 GLETTVFRSYFDSWPQIA 350 (873)
Q Consensus 333 G~Ep~~Fk~~F~~W~~~~ 350 (873)
|.||..||++|++|++..
T Consensus 697 G~Ep~~F~~~F~~Wd~~~ 714 (729)
T 1d0n_A 697 GFEPPSFVGWFLGWDDSY 714 (729)
T ss_dssp TCCCHHHHTTCTTCCGGG
T ss_pred CCCCHHHHhhhhhcCccc
Confidence 999999999999999764
No 11
>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-52 Score=446.24 Aligned_cols=266 Identities=24% Similarity=0.271 Sum_probs=128.1
Q ss_pred cccCCcccccCCccccEEEEEEECCeEeecCCCCCCccccCCeEEEEeeeecCCCCCceEEEEEccCCcCchhhhHHHHH
Q 002853 5 SKDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDK 84 (873)
Q Consensus 5 ~~~~d~~~~g~G~~~gl~iWrIe~~~~~~vp~~~~G~Fy~gdsYIVl~t~~~~~g~~~~~i~~W~G~~ss~de~g~AA~~ 84 (873)
....+|+|.++|+++||+||||+||++++||++.||+||+||||||||||..++|++.|+||||+|++||+||+|+||++
T Consensus 19 ~~~~~~~~~~~g~~~Gl~iWrIe~~~~~~v~~~~~G~Fy~gd~Yivl~t~~~~~g~~~~~i~~W~G~~ss~de~g~aa~~ 98 (297)
T 3tu5_B 19 SVVEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIF 98 (297)
T ss_dssp CCCCCHHHHHTTSSSEEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHH
T ss_pred ccccChhHhccCCCCceEEEEEcCCEEEECCHHHcCeecCCCeEEEeEeEECCCCceeEEEEEEeCCCCChhHHHHHHHH
Confidence 34557999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred HHHHHHHhCCCceEEEeeccCCcHHHHhhhCCcEEEecCCccCCCCCCCCCccceEEEEeeCcceEEEEEecCCCCCccC
Q 002853 85 ALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGKSNGETYKISMLTCKGDHVVRVKEVPFSRSSLNH 164 (873)
Q Consensus 85 aveLd~~lgg~~vq~Re~QG~Es~~Fl~~Fk~~ii~~~Gg~~sgf~~~~~~~~~~rL~~vkG~~~v~~~eV~~s~sSLns 164 (873)
|++||++|||.+|||||+||+||++||+||+++|+|++||++|||+||+++.+.+|+.++++.+....+++.+++-|+|+
T Consensus 99 av~Ld~~lgg~~vq~Re~Qg~Es~~Fl~~F~~~i~~~~GG~~sgf~~v~~~~~~~r~~rl~~~e~~~~r~~~ls~vs~~~ 178 (297)
T 3tu5_B 99 TVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASKLRKVAEQTSEGRPKKPSYVEAESERSALLAAIRGHS 178 (297)
T ss_dssp HHHHHHHTTTCCEEEEEETTCCCHHHHTTCTTCCEEESCCCCCCCBCCCCCC----------------------------
T ss_pred HHHHHHHcCCCceEEEEeCCcCCHHHHHHhccCcEEecCCCCCCCceecccCCCCcccceeeeeccccccceeeEEeccC
Confidence 99999999999999999999999999999999999999999999999998888888777777766666788899999999
Q ss_pred CCceeeeCCCeEEEEeCCCCCHHHHHHHHHHHHHhhccCCCCceeEEEEcCCccCCCCChhhHHHHcCCCCCCCCCCCCC
Q 002853 165 NDVFIVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRDSPSA 244 (873)
Q Consensus 165 ~DvFILd~~~~iyvW~G~~S~~~Er~kA~~va~~ik~~~~~g~~~v~~veeG~~~~~~E~~eFw~~lGg~~~~~~~~~~~ 244 (873)
|||||+|.+.++|+|.+ +.++.+++..+.+..+.+++.+..+.++ .++...+..++-....+.....+
T Consensus 179 Gd~fi~Dv~~~A~q~le-------~~r~~~~~~~~~d~~~~~~~~v~~~~~~-----~ep~~~~~~~~p~s~~~~~~~~~ 246 (297)
T 3tu5_B 179 GTLSLRKVSSLASEELQ-------SFRNAALGAPGLDKPQQEDLGLPPPPAL-----PPPPAPAPQAPSASVTVSRFSTG 246 (297)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceeeccccHHHHHHHH-------HHHHhhhcccCcCcccccccCcccCCcC-----CCCCCccccCCCCCCCCCCCCCC
Confidence 99999999999999964 4555666666666666666777777666 35667777666443332221111
Q ss_pred CC-CCCCCCceeEEEE-cCCCC--EEEE---ecCCC-ccccCCCCc
Q 002853 245 FQ-QQPDTPSTTFFWI-NLQGK--LCQI---AANSL-NKDMLEKDK 282 (873)
Q Consensus 245 ~~-~~~~~~~~rLy~v-~~~G~--l~~~---e~~~~-~q~~L~~~~ 282 (873)
.. ...+.....||.| +.+|. |..+ +..|| +++.+.+++
T Consensus 247 ~~~~~~dar~A~L~aIrsgtGa~rLkKv~~~~~~P~p~~~~~~~~~ 292 (297)
T 3tu5_B 247 TPSNSVNARQALMDAIRSGTGAARLRKTETQEKNPLPSKETIEQEK 292 (297)
T ss_dssp ----------------------------------------------
T ss_pred cccCchhhhhhhhHhhhcCCCCeeccccccccCCCCCchhhhhHHh
Confidence 11 1123345679988 56775 3323 45678 444445444
No 12
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G*
Probab=100.00 E-value=7.8e-44 Score=345.08 Aligned_cols=132 Identities=38% Similarity=0.596 Sum_probs=122.4
Q ss_pred CCCCcccCCcccccCCccccEEEEEEECCeEeecCCCCCCccccCCeEEEEeeeecCCCCCceEEEEEccCCcCchhhhH
Q 002853 1 MSLHSKDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTL 80 (873)
Q Consensus 1 ~~~~~~~~d~~~~g~G~~~gl~iWrIe~~~~~~vp~~~~G~Fy~gdsYIVl~t~~~~~g~~~~~i~~W~G~~ss~de~g~ 80 (873)
|+++|+++||+|.++|++++++||||++++++|||++.||+||+||||||||||...+|+.+++||||+|++||+||+++
T Consensus 19 ~~~~~~~~~~~f~~~g~~~gl~VWrIe~~~~v~vp~~~~G~FysgD~YIVl~ty~~~~g~~~~~IyfW~G~~ss~de~ga 98 (150)
T 2ff3_A 19 HGGSMVVEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGA 98 (150)
T ss_dssp -------CCHHHHHTTSSSEEEEEEEETTEEEECCGGGTTEEETTSEEEEEEEEECTTSSEEEEEEEEECTTCCHHHHHH
T ss_pred ccccccccChhhhccCCCCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEeCCCCCchhHHH
Confidence 89999999999999999999999999999999999999999999999999999987788899999999999999999999
Q ss_pred HHHHHHHHHHHhCCCceEEEeeccCCcHHHHhhhCCcEEEecCCccCCCCCC
Q 002853 81 VSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGKS 132 (873)
Q Consensus 81 AA~~aveLd~~lgg~~vq~Re~QG~Es~~Fl~~Fk~~ii~~~Gg~~sgf~~~ 132 (873)
||++|+|||+.|||.++|+||+||+||++||+||+++|+|++||++|||++|
T Consensus 99 AA~~aveLd~~lgg~~vQ~Re~QG~Ep~~Fl~lFkg~iii~~GG~~Sgf~~v 150 (150)
T 2ff3_A 99 AAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHV 150 (150)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEETTCCCHHHHHTCTTCCEEESCCCCCCCBCC
T ss_pred HHHHHHHHHHHcCCCceEEEeECCCCCHHHHHHhcCCeEEEeCCcCCccccC
Confidence 9999999999999999999999999999999999999999999999999875
No 13
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S*
Probab=100.00 E-value=2.1e-43 Score=335.26 Aligned_cols=128 Identities=40% Similarity=0.639 Sum_probs=124.9
Q ss_pred CCCcccCCcccccCCccccEEEEEEECCeEeecCCCCCCccccCCeEEEEeeeecCCCCCceEEEEEccCCcCchhhhHH
Q 002853 2 SLHSKDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLV 81 (873)
Q Consensus 2 ~~~~~~~d~~~~g~G~~~gl~iWrIe~~~~~~vp~~~~G~Fy~gdsYIVl~t~~~~~g~~~~~i~~W~G~~ss~de~g~A 81 (873)
+++|+++||+|.++|++++++||||++++++|||++.||+||+||||||||||...+|+.+|+||||+|++||+||+|+|
T Consensus 1 ~~~~~~~~~~~~~~g~~~gl~vWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~ty~~~~g~~~~~i~~W~G~~ss~de~g~A 80 (128)
T 3cip_G 1 AGHMVVEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAA 80 (128)
T ss_dssp CTTCCCCCHHHHHTTSSSEEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHH
T ss_pred CccccccchhHHhcCCCCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEcCCCCCcchHHHH
Confidence 57899999999999999999999999999999999999999999999999999877888999999999999999999999
Q ss_pred HHHHHHHHHHhCCCceEEEeeccCCcHHHHhhhCCcEEEecCCccCCC
Q 002853 82 SDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRS 129 (873)
Q Consensus 82 A~~aveLd~~lgg~~vq~Re~QG~Es~~Fl~~Fk~~ii~~~Gg~~sgf 129 (873)
|++|++||++|||.++|+||+||+||++||+||+++|+|++||++|||
T Consensus 81 a~~aveLd~~lgg~~vq~R~~QG~E~~~Fl~~F~~~iii~~Gg~~sgf 128 (128)
T 3cip_G 81 AIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGF 128 (128)
T ss_dssp HHHHHHHHHHTTTCEEEEEEETTCCCHHHHTTCTTCCEEESCCCCCCC
T ss_pred HHHHHHHHHHcCCCceEEEeECCCCCHHHHHHhCCCeEEEECCcCCCC
Confidence 999999999999999999999999999999999999999999999987
No 14
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1
Probab=100.00 E-value=1.4e-42 Score=337.00 Aligned_cols=134 Identities=37% Similarity=0.610 Sum_probs=126.7
Q ss_pred ccCCcccccCCccccEEEEEEECCeEeecCCCCCCccccCCeEEEEeeeecCCCCCceEEEEEccCCcCchhhhHHHHHH
Q 002853 6 KDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKA 85 (873)
Q Consensus 6 ~~~d~~~~g~G~~~gl~iWrIe~~~~~~vp~~~~G~Fy~gdsYIVl~t~~~~~g~~~~~i~~W~G~~ss~de~g~AA~~a 85 (873)
.++||+|.++|++++++||||++++++|||++.||+||+||||||||||...+|+.+|+||||+|++||+||+|+||++|
T Consensus 2 ~~~~~~f~~~g~~~gl~VWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~ty~~~~g~~~~~i~~W~G~~ss~de~g~Aa~~a 81 (147)
T 1t44_G 2 SHEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFT 81 (147)
T ss_dssp --CCHHHHHTTSSSEEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHH
T ss_pred CccchhhhccCCCCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEeCCCCChhHHHHHHHHH
Confidence 35699999999999999999999999999999999999999999999998778889999999999999999999999999
Q ss_pred HHHHHHhCCCceEEEeeccCCcHHHHhhhCCcEEEecCCccCCCCCCCCCccce
Q 002853 86 LELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGKSNGETYKI 139 (873)
Q Consensus 86 veLd~~lgg~~vq~Re~QG~Es~~Fl~~Fk~~ii~~~Gg~~sgf~~~~~~~~~~ 139 (873)
++||++|||.++|+||+||+||++||+||+++|+|++||++|+|+|++.+.+.+
T Consensus 82 veLd~~lgg~~vq~R~~QG~Ep~~Fl~~F~~~iii~~Gg~~s~~k~~et~~~~~ 135 (147)
T 1t44_G 82 VQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVETQEKNP 135 (147)
T ss_dssp HHHHHHTTTCCEEEEEETTCCCHHHHTTCTTCCEEESCCCCCCCBCCCCEECCC
T ss_pred HHHHHHcCCCceEEEEECCCCCHHHHHHhCCCeEEEeCCcccccceeccccccC
Confidence 999999999999999999999999999999999999999999999998655443
No 15
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A
Probab=100.00 E-value=1.1e-38 Score=302.10 Aligned_cols=112 Identities=38% Similarity=0.675 Sum_probs=107.7
Q ss_pred cccEEEEEEECCeEeecCCCCCCccccCCeEEEEeeeecCCCCCceEEEEEccCCcCchhhhHHHHHHHHHHHHhCCCce
Q 002853 18 KLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTV 97 (873)
Q Consensus 18 ~~gl~iWrIe~~~~~~vp~~~~G~Fy~gdsYIVl~t~~~~~g~~~~~i~~W~G~~ss~de~g~AA~~aveLd~~lgg~~v 97 (873)
+++++||||++++++|||++.||+||+||||||||||. .+|+.+|+||||+|++||+||+|+||++|++||++|||.|+
T Consensus 15 ~~~l~vWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~t~~-~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~v 93 (126)
T 2vik_A 15 TPGIQIWRIENMEMVPVPTKSYGNFYEGDCYVLLSTRK-TGSGFSYNIHYWLGKNSSQDEQGAAAIYTTQMDEYLGSVAV 93 (126)
T ss_dssp CCEEEEEECGGGSCCEECTTTTTCCCSSSCEEEEEEEE-CSSSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTSCSC
T ss_pred CCCEEEEEEeCCEEEECChhhcCeeCCCCeEEEEEecc-CCCceeEEEEEEeCCCCCchhHHHHHHHHHHHHHHcCCCcc
Confidence 34999999999999999999999999999999999985 56788999999999999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHhhhCCcEEEecCCccCCCC
Q 002853 98 QYREVQGQETEKFLSYFRPCIIPLDGKYSLRSG 130 (873)
Q Consensus 98 q~Re~QG~Es~~Fl~~Fk~~ii~~~Gg~~sgf~ 130 (873)
|+||+||+||++||+||+++|+|++||++|||+
T Consensus 94 q~R~~QG~E~~~Fl~~F~~~iii~~Gg~~sgf~ 126 (126)
T 2vik_A 94 QHREVQGHESETFRAYFKQGLIYKQGGVASGMK 126 (126)
T ss_dssp EEEEETTTSHHHHHHHCSSCCCCCCSCTTCSCC
T ss_pred EEEEECCCCCHHHHHHcCCCeEEEECcccCCCC
Confidence 999999999999999999999999999999985
No 16
>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=339.87 Aligned_cols=245 Identities=17% Similarity=0.176 Sum_probs=108.3
Q ss_pred cEEEEEEECCceeecCCcccceeeeccEEEEEeecC-CCCcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCCceEE
Q 002853 390 ILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYP-GNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMA 468 (873)
Q Consensus 390 ~l~VWrV~~~~~~~lp~~~~G~FysgdcYIvl~ty~-~~~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~vq~ 468 (873)
.|+||||+++.+++||++.||+||+||||||+|||. .+++..|.||||+|++|+++++++||++|++|++.|+|.+||+
T Consensus 34 Gl~iWrIe~~~~~~v~~~~~G~Fy~gd~Yivl~t~~~~~g~~~~~i~~W~G~~ss~de~g~aa~~av~Ld~~lgg~~vq~ 113 (297)
T 3tu5_B 34 GLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQH 113 (297)
T ss_dssp EEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred ceEEEEEcCCEEEECCHHHcCeecCCCeEEEeEeEECCCCceeEEEEEEeCCCCChhHHHHHHHHHHHHHHHcCCCceEE
Confidence 499999999999999999999999999999999995 4668899999999999999999999999999999999999999
Q ss_pred EeeccCCcHHHHhhcCc-EEEEecCcccccceeeeecccccccccccceEEEEEEecCCCceEEEEeccCCCCcCCCCeE
Q 002853 469 QVHQDMEPVQFFLIFQS-LIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYCY 547 (873)
Q Consensus 469 Rv~QGkEp~~Fl~lF~~-~iI~kGg~~~~~~~~~~~~~~~~~~~~~~~~~Lf~V~g~~~~~~~avqV~~~~ssLnS~d~f 547 (873)
|++||+||++||+||++ |+|++||.+|||+++. ++.+...-.+|+.+++... .++.+.+.++|+++||
T Consensus 114 Re~Qg~Es~~Fl~~F~~~i~~~~GG~~sgf~~v~------~~~~~~r~~rl~~~e~~~~-----r~~~ls~vs~~~Gd~f 182 (297)
T 3tu5_B 114 REVQGFESATFLGYFKSGLKYKKGGVASKLRKVA------EQTSEGRPKKPSYVEAESE-----RSALLAAIRGHSGTLS 182 (297)
T ss_dssp EEETTCCCHHHHTTCTTCCEEESCCCCCCCBCCC------CCC-------------------------------------
T ss_pred EEeCCcCCHHHHHHhccCcEEecCCCCCCCceec------ccCCCCcccceeeeecccc-----ccceeeEEeccCCcee
Confidence 99999999999999985 9999999999999874 2333333345555555443 3344566799999999
Q ss_pred EEEcCCeEEEEECCCCCHHHHHHHHHHHHHhC-CCCceEEeecCCCchhhhhhcCCCCCCCcccc---ccC--CCCCCee
Q 002853 548 ILQNGASVFTWIGNLSSSRDHDLLDRMVELIN-PTWQPISVREGSEPEVFWNALGGKSEYPREKE---IKG--FIEDPHL 621 (873)
Q Consensus 548 IL~~~~~vyvW~G~~ss~~e~~~a~~~a~~l~-~~~~~~~v~EG~E~~~FW~~LGg~~~y~~~~~---~~~--~~~~prL 621 (873)
|++.+..+|.|.++.... +++..+.+... ....+..+..+.+++..+..+|-+..-+.... ..+ ..+.+.|
T Consensus 183 i~Dv~~~A~q~le~~r~~---~~~~~~~d~~~~~~~~v~~~~~~~ep~~~~~~~~p~s~~~~~~~~~~~~~~~dar~A~L 259 (297)
T 3tu5_B 183 LRKVSSLASEELQSFRNA---ALGAPGLDKPQQEDLGLPPPPALPPPPAPAPQAPSASVTVSRFSTGTPSNSVNARQALM 259 (297)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccHHHHHHHHHHHHh---hhcccCcCcccccccCcccCCcCCCCCCccccCCCCCCCCCCCCCCcccCchhhhhhhh
Confidence 999999999997654221 11222222111 12345556778888888888876543322211 111 2346779
Q ss_pred EEEEecCCceEEe-----eeccc-ccCCCCCCC
Q 002853 622 FTCTLTEGDLKVK-----EIYNF-TQDDLTTED 648 (873)
Q Consensus 622 F~~s~~~G~~~v~-----Ei~~F-~Q~DL~~dd 648 (873)
|.+++.+|.+.+. |..+| +|+-+..++
T Consensus 260 ~aIrsgtGa~rLkKv~~~~~~P~p~~~~~~~~~ 292 (297)
T 3tu5_B 260 DAIRSGTGAARLRKTETQEKNPLPSKETIEQEK 292 (297)
T ss_dssp ---------------------------------
T ss_pred HhhhcCCCCeeccccccccCCCCCchhhhhHHh
Confidence 9999999976543 45688 555555554
No 17
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A
Probab=100.00 E-value=4.8e-36 Score=284.02 Aligned_cols=123 Identities=22% Similarity=0.347 Sum_probs=117.0
Q ss_pred CCccCCCCccccCCcEEEEEEECCceeecCCcccceeeeccEEEEEeecCCCCcceEEEEEEcCCCCCHHHHHHHHHHHH
Q 002853 376 LPEEDFEPYVNCRGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMS 455 (873)
Q Consensus 376 lp~~e~~~~~d~~g~l~VWrV~~~~~~~lp~~~~G~FysgdcYIvl~ty~~~~~~~~~iy~W~G~~ss~~e~~~aa~~a~ 455 (873)
||+...++++|+++.++||||+++.+++||++.+|+||+||||||+|||..+++.+++||||+|++|+++++++||++|+
T Consensus 3 ~~~~~~~~~d~~~~~l~vWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~t~~~~g~~~~~i~~W~G~~ss~de~g~Aa~~av 82 (126)
T 2vik_A 3 LSKKVTGKLDKTTPGIQIWRIENMEMVPVPTKSYGNFYEGDCYVLLSTRKTGSGFSYNIHYWLGKNSSQDEQGAAAIYTT 82 (126)
T ss_dssp TTTSSTTSSCSSCCEEEEEECGGGSCCEECTTTTTCCCSSSCEEEEEEEECSSSEEEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CchhhcCCcCcCCCCEEEEEEeCCEEEECChhhcCeeCCCCeEEEEEeccCCCceeEEEEEEeCCCCCchhHHHHHHHHH
Confidence 46666678899999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHhccCCceEEEeeccCCcHHHHhhcC-cEEEEecCcccccc
Q 002853 456 AIVDSTRGEAVMAQVHQDMEPVQFFLIFQ-SLIVFKGGLSTQYK 498 (873)
Q Consensus 456 ~l~~~~~~~~vq~Rv~QGkEp~~Fl~lF~-~~iI~kGg~~~~~~ 498 (873)
+|++.++|.|+|+|++||+||+|||+||+ +|+|++||.+|||+
T Consensus 83 eLd~~lgg~~vq~R~~QG~E~~~Fl~~F~~~iii~~Gg~~sgf~ 126 (126)
T 2vik_A 83 QMDEYLGSVAVQHREVQGHESETFRAYFKQGLIYKQGGVASGMK 126 (126)
T ss_dssp HHHHHTTSCSCEEEEETTTSHHHHHHHCSSCCCCCCSCTTCSCC
T ss_pred HHHHHcCCCccEEEEECCCCCHHHHHHcCCCeEEEECcccCCCC
Confidence 99999999999999999999999999998 59999999999884
No 18
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S*
Probab=100.00 E-value=1.2e-33 Score=268.35 Aligned_cols=110 Identities=28% Similarity=0.446 Sum_probs=104.9
Q ss_pred CCcEEEEEEECCceeecCCcccceeeeccEEEEEeec-CCCCcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCCce
Q 002853 388 RGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTY-PGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAV 466 (873)
Q Consensus 388 ~g~l~VWrV~~~~~~~lp~~~~G~FysgdcYIvl~ty-~~~~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~v 466 (873)
+..|+||||+++.+++||++.+|+||+||||||+||| ..+++.+++||||+|++|+++++++||++|++|++.++|.|+
T Consensus 17 ~~gl~vWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~ty~~~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~v 96 (128)
T 3cip_G 17 EPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAV 96 (128)
T ss_dssp SSEEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred CCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEcCCCCCcchHHHHHHHHHHHHHHcCCCce
Confidence 5679999999999999999999999999999999999 456788999999999999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHhhcCc-EEEEecCccccc
Q 002853 467 MAQVHQDMEPVQFFLIFQS-LIVFKGGLSTQY 497 (873)
Q Consensus 467 q~Rv~QGkEp~~Fl~lF~~-~iI~kGg~~~~~ 497 (873)
|+|++||+||+|||+||++ |+|++||.+|||
T Consensus 97 q~R~~QG~E~~~Fl~~F~~~iii~~Gg~~sgf 128 (128)
T 3cip_G 97 QHREVQGFESATFLGYFKSGLKYKKGGVASGF 128 (128)
T ss_dssp EEEEETTCCCHHHHTTCTTCCEEESCCCCCCC
T ss_pred EEEeECCCCCHHHHHHhCCCeEEEECCcCCCC
Confidence 9999999999999999995 999999998875
No 19
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G*
Probab=100.00 E-value=2.2e-33 Score=271.92 Aligned_cols=112 Identities=28% Similarity=0.444 Sum_probs=107.0
Q ss_pred CCcEEEEEEECCceeecCCcccceeeeccEEEEEeec-CCCCcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCCce
Q 002853 388 RGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTY-PGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAV 466 (873)
Q Consensus 388 ~g~l~VWrV~~~~~~~lp~~~~G~FysgdcYIvl~ty-~~~~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~v 466 (873)
+..|+||||+++++++||++.+|+||+||||||+||| ..+++.+++||||+|++|+++|+++||++|++|++.++|.|+
T Consensus 36 ~~gl~VWrIe~~~~v~vp~~~~G~FysgD~YIVl~ty~~~~g~~~~~IyfW~G~~ss~de~gaAA~~aveLd~~lgg~~v 115 (150)
T 2ff3_A 36 EPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAV 115 (150)
T ss_dssp SSEEEEEEEETTEEEECCGGGTTEEETTSEEEEEEEEECTTSSEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCE
T ss_pred CCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEeCCCCCchhHHHHHHHHHHHHHHcCCCce
Confidence 5679999999999999999999999999999999999 556788999999999999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHhhcC-cEEEEecCcccccce
Q 002853 467 MAQVHQDMEPVQFFLIFQ-SLIVFKGGLSTQYKK 499 (873)
Q Consensus 467 q~Rv~QGkEp~~Fl~lF~-~~iI~kGg~~~~~~~ 499 (873)
|+|++||+||++||+||+ +|+|++||.+|||++
T Consensus 116 Q~Re~QG~Ep~~Fl~lFkg~iii~~GG~~Sgf~~ 149 (150)
T 2ff3_A 116 QHREVQGFESATFLGYFKSGLKYKKGGVASGFKH 149 (150)
T ss_dssp EEEEETTCCCHHHHHTCTTCCEEESCCCCCCCBC
T ss_pred EEEeECCCCCHHHHHHhcCCeEEEeCCcCCcccc
Confidence 999999999999999999 599999999999975
No 20
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1
Probab=100.00 E-value=3e-33 Score=271.48 Aligned_cols=114 Identities=27% Similarity=0.429 Sum_probs=108.8
Q ss_pred CCcEEEEEEECCceeecCCcccceeeeccEEEEEeec-CCCCcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCCce
Q 002853 388 RGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTY-PGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAV 466 (873)
Q Consensus 388 ~g~l~VWrV~~~~~~~lp~~~~G~FysgdcYIvl~ty-~~~~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~v 466 (873)
+..|+||||+++.+++||++.||+||+||||||+||| ..+++.+++||||+|++|+++++++||++|++|++.++|.++
T Consensus 14 ~~gl~VWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~ty~~~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~v 93 (147)
T 1t44_G 14 EPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAV 93 (147)
T ss_dssp SSEEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCE
T ss_pred CCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEeCCCCChhHHHHHHHHHHHHHHHcCCCce
Confidence 5679999999999999999999999999999999999 456788999999999999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHhhcC-cEEEEecCcccccceee
Q 002853 467 MAQVHQDMEPVQFFLIFQ-SLIVFKGGLSTQYKKFI 501 (873)
Q Consensus 467 q~Rv~QGkEp~~Fl~lF~-~~iI~kGg~~~~~~~~~ 501 (873)
|+|++||+||+|||+||+ +|+|++||.+++|+++.
T Consensus 94 q~R~~QG~Ep~~Fl~~F~~~iii~~Gg~~s~~k~~e 129 (147)
T 1t44_G 94 QHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVE 129 (147)
T ss_dssp EEEEETTCCCHHHHTTCTTCCEEESCCCCCCCBCCC
T ss_pred EEEEECCCCCHHHHHHhCCCeEEEeCCcccccceec
Confidence 999999999999999998 59999999999999874
No 21
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=99.94 E-value=4.8e-27 Score=219.81 Aligned_cols=109 Identities=34% Similarity=0.507 Sum_probs=88.1
Q ss_pred CCCCCCCCCccceEEEEeeCcceEEEEEecCCCCCccCCCceeeeCCCeEEEEeCCCCCHHHHHHHHHHHHHhhccCCCC
Q 002853 127 LRSGKSNGETYKISMLTCKGDHVVRVKEVPFSRSSLNHNDVFIVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGG 206 (873)
Q Consensus 127 sgf~~~~~~~~~~rL~~vkG~~~v~~~eV~~s~sSLns~DvFILd~~~~iyvW~G~~S~~~Er~kA~~va~~ik~~~~~g 206 (873)
|||+||++..+.+|||||+|+++++++|||++++|||++||||||+++.||+|+|++||..||.+|+++|+.| +.++.|
T Consensus 1 SGf~~v~~~~~~~rL~~v~G~~~~~~~eV~~~~ssLns~D~FILd~g~~iyvW~G~~ss~~Ek~~A~~~a~~i-~~er~g 79 (114)
T 1svq_A 1 SGFNHVKPTEYKPRLLHISGDKNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQEKNKAAEVARAI-DAERKG 79 (114)
T ss_dssp ---------CCCEEEEEEECTTSCEEEEECCCSSSCCTTSEEEEEETTEEEECCCTTCCHHHHHHHHHHHHHH-HHHHTT
T ss_pred CCCccccCCCCCcEEEEEECCCcEEEEEecCCHHHcCCCCeEEEecCCEEEEEeCCCCCHHHHHHHHHHHHHh-hhccCC
Confidence 6899999877889999999999999999999999999999999999999999999999999999999999999 456778
Q ss_pred ceeEEEEcCCccCCCCChhhHHHHcCCCCCCCC
Q 002853 207 KCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPR 239 (873)
Q Consensus 207 ~~~v~~veeG~~~~~~E~~eFw~~lGg~~~~~~ 239 (873)
+++|.+|+||+. .|+.+||.+|||++++..
T Consensus 80 ~~~i~vv~eg~~---~E~~~Fw~~LGg~~~~~~ 109 (114)
T 1svq_A 80 LPKVEVFCETDS---DIPAEFWKLLGGKGAIAA 109 (114)
T ss_dssp CSEEEECCCCTT---CCCHHHHHHHTC------
T ss_pred CccEEEEeCCCc---CCcHHHHHHcCCCCCCcc
Confidence 899999999941 378999999999987653
No 22
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=99.92 E-value=3.8e-25 Score=203.74 Aligned_cols=98 Identities=32% Similarity=0.528 Sum_probs=92.5
Q ss_pred ceEEEEeeCcceEEEEEecCCCCCccCCCceeeeCCCeEEEEeCCCCCHHHHHHHHHHHHHhhccCCCCceeEEEEcCCc
Q 002853 138 KISMLTCKGDHVVRVKEVPFSRSSLNHNDVFIVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGK 217 (873)
Q Consensus 138 ~~rL~~vkG~~~v~~~eV~~s~sSLns~DvFILd~~~~iyvW~G~~S~~~Er~kA~~va~~ik~~~~~g~~~v~~veeG~ 217 (873)
.+|||||+|++++++.|||++++||||+||||||+++.||+|+|++||..||.+|+++|+.|++.++.|+++|.+|+||+
T Consensus 2 ~~rL~~v~g~~~~~~~eV~~~~~sLns~d~FILd~g~~iyvW~G~~s~~~Ek~~A~~~a~~i~~~er~~~~~i~~v~eG~ 81 (104)
T 1kcq_A 2 VQRLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVSEEGT 81 (104)
T ss_dssp CCEEEEEEESSSEEEEEECSSGGGCCTTSEEEEECSSEEEEEECTTCCHHHHHHHHHHHHHHHHHTSTTCSEEEEEETTC
T ss_pred CcEEEEEECCCcEEEEEecCCHHHcCCCCeEEEeCCCEEEEEeCCCCCHHHHHHHHHHHHHHHhhccCCCCcEEEEeCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999988888899999999995
Q ss_pred cCCCCChhhHHHHcCCCCCCCCC
Q 002853 218 FVGDSDVGEFWSLFGGYAPIPRD 240 (873)
Q Consensus 218 ~~~~~E~~eFw~~lGg~~~~~~~ 240 (873)
|+.+||.+|||+++|+..
T Consensus 82 -----E~~~Fw~~LGg~~~~~~~ 99 (104)
T 1kcq_A 82 -----EPEAMLQVLGPKPALPAG 99 (104)
T ss_dssp -----CCHHHHHHHCSCCCCCCC
T ss_pred -----CCHHHHHHcCCCCCCCCC
Confidence 889999999999887653
No 23
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=99.86 E-value=1.2e-21 Score=180.29 Aligned_cols=92 Identities=25% Similarity=0.391 Sum_probs=85.7
Q ss_pred eEEEEEEecCCCceEEEEeccCCCCcCCCCeEEEEcCCeEEEEECCCCCHHHHHHHHHHHHHhC-----CCCceEEeecC
Q 002853 516 MALFCIQGTSPCNMQAFQVDRVSTCLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELIN-----PTWQPISVREG 590 (873)
Q Consensus 516 ~~Lf~V~g~~~~~~~avqV~~~~ssLnS~d~fIL~~~~~vyvW~G~~ss~~e~~~a~~~a~~l~-----~~~~~~~v~EG 590 (873)
++||||+|. .+++++||++.++||||+|||||++++.||+|+|++|+..||.+|..+|+.|+ ...++..|+||
T Consensus 3 ~rL~~v~g~--~~~~~~eV~~~~~sLns~d~FILd~g~~iyvW~G~~s~~~Ek~~A~~~a~~i~~~er~~~~~i~~v~eG 80 (104)
T 1kcq_A 3 QRLFQVKGR--RVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVSEEG 80 (104)
T ss_dssp CEEEEEEES--SSEEEEEECSSGGGCCTTSEEEEECSSEEEEEECTTCCHHHHHHHHHHHHHHHHHTSTTCSEEEEEETT
T ss_pred cEEEEEECC--CcEEEEEecCCHHHcCCCCeEEEeCCCEEEEEeCCCCCHHHHHHHHHHHHHHHhhccCCCCcEEEEeCC
Confidence 699999997 59999999999999999999999999999999999999999999999999986 34678999999
Q ss_pred CCchhhhhhcCCCCCCCcc
Q 002853 591 SEPEVFWNALGGKSEYPRE 609 (873)
Q Consensus 591 ~E~~~FW~~LGg~~~y~~~ 609 (873)
.||++||.+|||+..|+..
T Consensus 81 ~E~~~Fw~~LGg~~~~~~~ 99 (104)
T 1kcq_A 81 TEPEAMLQVLGPKPALPAG 99 (104)
T ss_dssp CCCHHHHHHHCSCCCCCCC
T ss_pred CCCHHHHHHcCCCCCCCCC
Confidence 9999999999999988653
No 24
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=99.85 E-value=9.6e-22 Score=183.87 Aligned_cols=94 Identities=26% Similarity=0.441 Sum_probs=80.8
Q ss_pred cceEEEEEEecCCCceEEEEeccCCCCcCCCCeEEEEcCCeEEEEECCCCCHHHHHHHHHHHHHhCCC----CceEEeec
Q 002853 514 KKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPT----WQPISVRE 589 (873)
Q Consensus 514 ~~~~Lf~V~g~~~~~~~avqV~~~~ssLnS~d~fIL~~~~~vyvW~G~~ss~~e~~~a~~~a~~l~~~----~~~~~v~E 589 (873)
..++||||+|. .+++++||++.++||||+|||||++++.||+|+|++|+..||.+|..+|+.|+.. .++.+|+|
T Consensus 11 ~~~rL~~v~G~--~~~~~~eV~~~~ssLns~D~FILd~g~~iyvW~G~~ss~~Ek~~A~~~a~~i~~er~g~~~i~vv~e 88 (114)
T 1svq_A 11 YKPRLLHISGD--KNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQEKNKAAEVARAIDAERKGLPKVEVFCE 88 (114)
T ss_dssp CCEEEEEEECT--TSCEEEEECCCSSSCCTTSEEEEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCcEEEEEECC--CcEEEEEecCCHHHcCCCCeEEEecCCEEEEEeCCCCCHHHHHHHHHHHHHhhhccCCCccEEEEeC
Confidence 35799999997 6899999999999999999999999999999999999999999999999998422 46889999
Q ss_pred CC--CchhhhhhcCCCCCCCcc
Q 002853 590 GS--EPEVFWNALGGKSEYPRE 609 (873)
Q Consensus 590 G~--E~~~FW~~LGg~~~y~~~ 609 (873)
|+ ||++||.+|||+.+|...
T Consensus 89 g~~~E~~~Fw~~LGg~~~~~~~ 110 (114)
T 1svq_A 89 TDSDIPAEFWKLLGGKGAIAAK 110 (114)
T ss_dssp CTTCCCHHHHHHHTC-------
T ss_pred CCcCCcHHHHHHcCCCCCCccc
Confidence 99 999999999999888653
No 25
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A
Probab=97.23 E-value=8.9e-05 Score=61.81 Aligned_cols=30 Identities=33% Similarity=0.367 Sum_probs=27.4
Q ss_pred cccccceeeec---cCCCCCCCccccccccccc
Q 002853 840 LIYSYEQLRVD---SRNPVIGIDVTKREVSPVA 869 (873)
Q Consensus 840 ~~~~y~~~~~~---~~~~~~~id~~~~e~yl~~ 869 (873)
.+|||++|+++ +.+++.|||.||+|.||+-
T Consensus 4 ~~ypy~~L~~~~~~~~~lP~gVD~~~lE~yLsd 36 (68)
T 1qzp_A 4 QIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSA 36 (68)
T ss_dssp CCBCSTTTCCCSCTTCCCCSSCCGGGCGGGBCH
T ss_pred ccccHHHHHHhcccccCCCCCCCchHHHhhCCH
Confidence 57999999986 7899999999999999984
No 26
>1ujs_A Actin-binding LIM protein homologue; VHP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 2l3x_A
Probab=96.82 E-value=0.00033 Score=61.07 Aligned_cols=30 Identities=30% Similarity=0.310 Sum_probs=27.0
Q ss_pred cccccceeeecc---CCCCCCCccccccccccc
Q 002853 840 LIYSYEQLRVDS---RNPVIGIDVTKREVSPVA 869 (873)
Q Consensus 840 ~~~~y~~~~~~~---~~~~~~id~~~~e~yl~~ 869 (873)
.+|||++|++++ .+++.|||.||||.||+-
T Consensus 18 ~~Ypye~L~~~~~~~~~lP~gVD~tklE~YLSd 50 (88)
T 1ujs_A 18 KIYPYELLLVTTRGRNRLPKDVDRTRLERHLSQ 50 (88)
T ss_dssp CCCCTTTTCCCTTTTCCCCSSCCTTTGGGGSCT
T ss_pred ccccHHHHHHhcccccCCCcccCHHHHHhcCCH
Confidence 789999999864 688999999999999985
No 27
>1yu8_X Villin; alpha helix, 3-10 helix, structural protein; 1.45A {Gallus gallus} SCOP: a.14.1.1 PDB: 1qqv_A 1yu5_X 2rjx_A 2rjy_A 1yu7_X 2rjv_A 2rjw_A 3nkj_A 3myc_A 3mya_A 3mye_X 1unc_A
Probab=96.72 E-value=0.00027 Score=58.62 Aligned_cols=30 Identities=13% Similarity=0.153 Sum_probs=27.0
Q ss_pred cccccceeeeccCCC-CCCCccccccccccc
Q 002853 840 LIYSYEQLRVDSRNP-VIGIDVTKREVSPVA 869 (873)
Q Consensus 840 ~~~~y~~~~~~~~~~-~~~id~~~~e~yl~~ 869 (873)
.+|||++|+..+.+| +.|||.+|+|.||+.
T Consensus 5 ~~yp~~~L~~~~~~~lP~gVD~~~lE~yLsd 35 (67)
T 1yu8_X 5 ETFPLDVLVNTAAEDLPRGVDPSAKENHLSD 35 (67)
T ss_dssp CCCCHHHHHSSCGGGSCTTCCTTCGGGGSCH
T ss_pred cccCHHHHHHhccCCCCcccChHHHHhcCCH
Confidence 579999999888777 899999999999984
No 28
>2k6m_S Supervillin; SVHP, HP, headpiece, archvillin, actin capping, actin-binding, alternative splicing, calcium, cytoplasm, cytoskeleton, membrane; NMR {Homo sapiens} PDB: 2k6n_A
Probab=96.50 E-value=0.00075 Score=56.00 Aligned_cols=30 Identities=27% Similarity=0.284 Sum_probs=25.3
Q ss_pred cccccccceeeeccCCCCCCCccccccccccc
Q 002853 838 SSLIYSYEQLRVDSRNPVIGIDVTKREVSPVA 869 (873)
Q Consensus 838 ~~~~~~y~~~~~~~~~~~~~id~~~~e~yl~~ 869 (873)
...+|||++|++ .+.+.|||.||||.||+.
T Consensus 6 ~~~~yp~~~L~~--~~lP~gVD~~~lE~yLsd 35 (67)
T 2k6m_S 6 CKTIYPLADLLA--RPLPEGVDPLKLEIYLTD 35 (67)
T ss_dssp CCCCCCHHHHTT--SCCCSSSBTTBCGGGSCH
T ss_pred cCCccCHHHHhc--CCCCCCCCchHHHhhCCH
Confidence 446899999994 455789999999999984
No 29
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=93.32 E-value=0.25 Score=59.97 Aligned_cols=51 Identities=14% Similarity=0.257 Sum_probs=36.9
Q ss_pred ceeEEEEcC--CCCEEEEecCCCccccCCCCceEEeeCCCeEEEEecCCCCHH
Q 002853 253 STTFFWINL--QGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNTSIT 303 (873)
Q Consensus 253 ~~rLy~v~~--~G~l~~~e~~~~~q~~L~~~~vyILD~g~eIyVWiG~~as~~ 303 (873)
.|+||.+.. ......-+..+++-+-|.++.+||||+|..||||+|+.++.+
T Consensus 620 yP~L~~~h~~~~~~~~~P~~v~ls~~~l~~~giyLlD~g~~i~lw~G~~v~~~ 672 (766)
T 3eh2_A 620 YPRLLPLTKSPVESTTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQG 672 (766)
T ss_dssp SCEEEECSSCCCSCC--CCCBCSSGGGCCTTCEEEEECSSEEEEEECTTCCHH
T ss_pred hheEEEeecCCcccccCCCCcCCcHHHcCCCcEEEEEcCcEEEEEecCCCCHH
Confidence 478998731 111111123458888899999999999999999999988654
No 30
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=93.07 E-value=0.23 Score=60.21 Aligned_cols=109 Identities=18% Similarity=0.208 Sum_probs=66.2
Q ss_pred CCeeEEEEecCC-ceEEeeecccccCCCCCCCEEEEeCCCeEEEEEcCCCCHHHHHHH----------------------
Q 002853 618 DPHLFTCTLTEG-DLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHSDLNSKQQA---------------------- 674 (873)
Q Consensus 618 ~prLF~~s~~~G-~~~v~Ei~~F~Q~DL~~ddv~ILD~~~~IyVWiG~~a~~~ek~~A---------------------- 674 (873)
.|+||.+.+-.- ....-+-.+.+-+-|.++.|||||++..||||+|..+++.--+..
T Consensus 620 yP~L~~~h~~~~~~~~~P~~v~ls~~~l~~~giyLlD~g~~i~lw~G~~v~~~~l~dlFgv~~~~~i~~~~~~lp~~~~~ 699 (766)
T 3eh2_A 620 YPRLLPLTKSPVESTTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSVLPVLDNP 699 (766)
T ss_dssp SCEEEECSSCCCSCC--CCCBCSSGGGCCTTCEEEEECSSEEEEEECTTCCHHHHHHHHSCSSGGGSCTTCCSCCCCSSH
T ss_pred hheEEEeecCCcccccCCCCcCCcHHHcCCCcEEEEEcCcEEEEEecCCCCHHHHHHHcCCCchhhcCcccccCCCCCCH
Confidence 699999863211 111222346777789999999999999999999999986532221
Q ss_pred ----HHHHHHHHHhcccccCCCCCCcEEEecCCCCChh--chhccccCcccccccCCcHHHHHHHh
Q 002853 675 ----LNIGQKFLETDILVEGLSLETPIYVVTEGHEPPF--FTCFFAWDPLKAKMHGNSFERKLAIL 734 (873)
Q Consensus 675 ----l~~A~~Yl~~~~~~~~~~~~~pi~~V~eG~EP~~--Ft~~F~Wd~~k~~~~~~s~~~k~~~~ 734 (873)
+.--.++++. .++...|+++|++| .|.+ |..++.=|.. ..-+-||..=|..|
T Consensus 700 ~s~~vr~ii~~lr~-----~~~~~~~l~ivr~~-~~~~~~f~~~LvED~~--~~~~~SY~dfL~~l 757 (766)
T 3eh2_A 700 LSKKVRGLIDSLRA-----QRSRYMKLTVVKQE-DKMEMLFKHFLVEDKS--LSGGASYVDFLCHM 757 (766)
T ss_dssp HHHHHHHHHHHHHT-----TSSSCCEEEEEESS-SSTHHHHHTTCTTSCC--TTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hCCCCceEEEEeCC-CChHHHHHHhCcccCC--CCCCCCHHHHHHHH
Confidence 1122233332 24456789999998 4543 4444433332 11246887766554
No 31
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=92.02 E-value=0.3 Score=59.33 Aligned_cols=109 Identities=18% Similarity=0.276 Sum_probs=66.0
Q ss_pred CCeeEEEEecCCce-EEeeecccccCCCCCCCEEEEeCCCeEEEEEcCCCCHHHHHHHHH--------------------
Q 002853 618 DPHLFTCTLTEGDL-KVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHSDLNSKQQALN-------------------- 676 (873)
Q Consensus 618 ~prLF~~s~~~G~~-~v~Ei~~F~Q~DL~~ddv~ILD~~~~IyVWiG~~a~~~ek~~Al~-------------------- 676 (873)
.|+||.+.+-...+ ..-+-.+.+-+-|.++.|||||++..||||+|..+++.-.+..+.
T Consensus 624 yP~L~~~h~l~~~~~~~P~~v~ls~~~l~~~giyLLD~g~~i~lw~G~~v~~~l~~~lfgv~~~~~i~~~~~~lp~~~~~ 703 (770)
T 3efo_B 624 YPQLLPIHTLDVKSTMLPAAVRCSESRLSEEGIFLLANGLHMFLWLGVSSPPELIQGIFNVPSFAHINTDMTLLPEVGNP 703 (770)
T ss_dssp SCEEEECTTCCSSSCSCCCCCCSSGGGCCTTCEEEEECSSEEEEEECTTCCHHHHHHHHSSSSGGGCCTTCCSCCCCCSS
T ss_pred ccceEEEeccccccccCCCCcCCcHHHcCCCcEEEEECCcEEEEEecCCCCHHHHHHhcCCCchhhcCcccccCCCCCCH
Confidence 69999985422111 111234677788999999999999999999999998754332221
Q ss_pred ------HHHHHHHhcccccCCCCCCcEEEecCCCCChh--chhccccCcccccccCCcHHHHHHHh
Q 002853 677 ------IGQKFLETDILVEGLSLETPIYVVTEGHEPPF--FTCFFAWDPLKAKMHGNSFERKLAIL 734 (873)
Q Consensus 677 ------~A~~Yl~~~~~~~~~~~~~pi~~V~eG~EP~~--Ft~~F~Wd~~k~~~~~~s~~~k~~~~ 734 (873)
--.++++. .++...|+++|++| .|.+ |..++.=|.. ...+-||..=|..|
T Consensus 704 ~s~~vr~ii~~lr~-----~r~~~~~l~ivr~~-~~~e~~f~~~LvED~~--~~~~~SY~dfL~~l 761 (770)
T 3efo_B 704 YSQQLRMIMGIIQQ-----KRPYSMKLTIVKQR-EQPEMVFRQFLVEDKG--LYGGSSYVDFLCCV 761 (770)
T ss_dssp HHHHHHHHHHHHHT-----TCSSCCEEEEEEST-TSTTHHHHTTCTTSCC-----CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hCCCCccEEEEeCC-CChHHHHHHhCcccCC--CCCCCCHHHHHHHH
Confidence 11222322 24456789999998 4433 4444432332 12346887765544
No 32
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=91.42 E-value=0.47 Score=57.94 Aligned_cols=53 Identities=15% Similarity=0.325 Sum_probs=39.5
Q ss_pred CCeeEEEEec---CC------------ceEEeeecccccCCCCCCCEEEEeCCCeEEEEEcCCCCHHH
Q 002853 618 DPHLFTCTLT---EG------------DLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHSDLNS 670 (873)
Q Consensus 618 ~prLF~~s~~---~G------------~~~v~Ei~~F~Q~DL~~ddv~ILD~~~~IyVWiG~~a~~~e 670 (873)
.|+||.+.+. .| .+..-+-.+.+-+-|.++.+||||+|..||+|+|..+++.-
T Consensus 637 yP~L~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~g~yLld~G~~i~lwvg~~~~~~l 704 (810)
T 1pcx_A 637 YPDVYSLHDMADEAGLPVQTEDGEATGTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVPAL 704 (810)
T ss_dssp SCEEEECTTCCSSTTSBC--------CCBCCCCBCCSSTTSCCTTCEEEEECSSEEEEEECTTCCHHH
T ss_pred cCEEEEeccCcccccccccccccccccccccCCcccCCHHHhCcCCEEEEECCCEEEEEeCCCCCHHH
Confidence 5999987542 13 22222234677778999999999999999999999998654
No 33
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=91.07 E-value=0.57 Score=56.91 Aligned_cols=86 Identities=10% Similarity=0.135 Sum_probs=55.6
Q ss_pred ceeEEEEcCCCCEEEEecCCCccccCCCCceEEeeCCCeEEEEecCCCCH------------HHHHHHH----HHHHHHH
Q 002853 253 STTFFWINLQGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNTSI------------TERRISI----SASEDFL 316 (873)
Q Consensus 253 ~~rLy~v~~~G~l~~~e~~~~~q~~L~~~~vyILD~g~eIyVWiG~~as~------------~erk~Al----~~A~~y~ 316 (873)
.|+||.+...|...+ .+++.+-|.++.+||||+|..||||+|+.+.. +..+.-+ .-|++++
T Consensus 626 yP~L~~~~~~~~P~~---v~Ls~~~l~~~gi~LLD~g~~i~i~~G~~v~~~~~~~~~~~~~~~~~~~ll~~p~~~a~~i~ 702 (768)
T 1m2o_A 626 QPTLTSFSMEDDPQP---VLLDSISVKPNTILLLDTFFFILIYHGEQIAQWRKAGYQDDPQYADFKALLEEPKLEAAELL 702 (768)
T ss_dssp SCEEEEECSSSCCEE---CCSBGGGCCTTCEEEEECSSEEEEEECHHHHHHHHHTGGGSTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEecCCCCCcc---eeCcHHHcCCCCEEEEECCCEEEEEECCcchHHHhcccCCCchhhhHHHHhhhhHHHHHHHH
Confidence 478998865554332 46888999999999999999999999975431 1112222 2355555
Q ss_pred HhcCCCCCceEEEecCCccch-hhhhhc
Q 002853 317 RNQGRTTGTHLTFLTEGLETT-VFRSYF 343 (873)
Q Consensus 317 ~~~~R~p~t~i~~V~eG~Ep~-~Fk~~F 343 (873)
+. |-|.+.+.++.+|.-.. .|+++.
T Consensus 703 ~~--R~p~Pr~i~~~~~~sqarfl~s~L 728 (768)
T 1m2o_A 703 VD--RFPLPRFIDTEAGGSQARFLLSKL 728 (768)
T ss_dssp HT--CSSCCEEEEEETTCGGGHHHHTTS
T ss_pred hc--CCCCceEEEECCCCcHHHHHHHHc
Confidence 43 65666666677765443 334554
No 34
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=90.88 E-value=0.46 Score=57.75 Aligned_cols=86 Identities=12% Similarity=0.209 Sum_probs=57.4
Q ss_pred ceeEEEEcCCCCEEEEecCCCccccCCCCceEEeeCCCeEEEEecCCCCH------------HHHHHH----HHHHHHHH
Q 002853 253 STTFFWINLQGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNTSI------------TERRIS----ISASEDFL 316 (873)
Q Consensus 253 ~~rLy~v~~~G~l~~~e~~~~~q~~L~~~~vyILD~g~eIyVWiG~~as~------------~erk~A----l~~A~~y~ 316 (873)
.|+||.+...|...+ .+++-+-|.++.+||||+|..||||+|+.+.. +..+.. ...|++++
T Consensus 624 yP~L~~~~~~~~P~~---v~ls~~~l~~~gi~LLD~g~~i~i~~G~~v~~w~~~~~~~~p~~~~~~~~l~~p~~~a~~i~ 700 (769)
T 2nut_A 624 QPILYAYSFSGPPEP---VLLDSSSILADRILLMDTFFQILIYHGETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEIL 700 (769)
T ss_dssp SCEEEEECSSSSCEE---CCSSGGGCCTTCEEEEECSSEEEEEECHHHHHHHHHTTTTSGGGHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEeccCCCCCCc---eeCCHHHccCCCEEEEECCCEEEEEECCcchHHHhCCCCCCchhhhHHHHHHhHHHHHHHHH
Confidence 378998865554332 46888999999999999999999999975421 111222 23555555
Q ss_pred HhcCCCCCceEEEecCC-ccchhhhhhc
Q 002853 317 RNQGRTTGTHLTFLTEG-LETTVFRSYF 343 (873)
Q Consensus 317 ~~~~R~p~t~i~~V~eG-~Ep~~Fk~~F 343 (873)
+. |-|.+.++.+.|| .+-..|.++-
T Consensus 701 ~~--R~p~Pr~i~~~~g~sqaRfl~skl 726 (769)
T 2nut_A 701 HS--RFPMPRYIDTEHGGSQARFLLSKV 726 (769)
T ss_dssp HH--SSSCCEEEEEETTCSTTHHHHHHC
T ss_pred hc--CCCCCeEEEEcCCCcHHHHHHHhc
Confidence 43 6566677777764 5555566655
No 35
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=89.57 E-value=0.47 Score=57.93 Aligned_cols=33 Identities=24% Similarity=0.543 Sum_probs=29.4
Q ss_pred CCCccccCCCCceEEeeCCCeEEEEecCCCCHH
Q 002853 271 NSLNKDMLEKDKCYMLDCVNEVFVWTGRNTSIT 303 (873)
Q Consensus 271 ~~~~q~~L~~~~vyILD~g~eIyVWiG~~as~~ 303 (873)
.+++.+.|+++.+||||+|..||+|+|+.++.+
T Consensus 671 l~Ls~~~l~~~g~yLld~G~~i~lwvg~~~~~~ 703 (810)
T 1pcx_A 671 INATSSLFERYGLYLIDNGNELFLWMGGDAVPA 703 (810)
T ss_dssp CCSSTTSCCTTCEEEEECSSEEEEEECTTCCHH
T ss_pred ccCCHHHhCcCCEEEEECCCEEEEEeCCCCCHH
Confidence 468888999999999999999999999987743
No 36
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=89.53 E-value=0.84 Score=55.41 Aligned_cols=52 Identities=17% Similarity=0.204 Sum_probs=37.2
Q ss_pred ceeEEEEcC-CCCE-EEEecCCCccccCCCCceEEeeCCCeEEEEecCCCCHHH
Q 002853 253 STTFFWINL-QGKL-CQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNTSITE 304 (873)
Q Consensus 253 ~~rLy~v~~-~G~l-~~~e~~~~~q~~L~~~~vyILD~g~eIyVWiG~~as~~e 304 (873)
.|+||.+.. .... ..-+..+++.+-|.++.+||||+|..||||+|+.+...-
T Consensus 624 yP~L~~~h~l~~~~~~~P~~v~ls~~~l~~~giyLLD~g~~i~lw~G~~v~~~l 677 (770)
T 3efo_B 624 YPQLLPIHTLDVKSTMLPAAVRCSESRLSEEGIFLLANGLHMFLWLGVSSPPEL 677 (770)
T ss_dssp SCEEEECTTCCSSSCSCCCCCCSSGGGCCTTCEEEEECSSEEEEEECTTCCHHH
T ss_pred ccceEEEeccccccccCCCCcCCcHHHcCCCcEEEEECCcEEEEEecCCCCHHH
Confidence 478998731 1110 111234578889999999999999999999999887543
No 37
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=89.47 E-value=0.22 Score=60.25 Aligned_cols=53 Identities=28% Similarity=0.659 Sum_probs=39.0
Q ss_pred CCeeEEEEe--cCCceEEee-------ecccccCCCCCCCEEEEeCCCeEEEEEcCCCCHHH
Q 002853 618 DPHLFTCTL--TEGDLKVKE-------IYNFTQDDLTTEDILVLDCCREIYVWIGCHSDLNS 670 (873)
Q Consensus 618 ~prLF~~s~--~~G~~~v~E-------i~~F~Q~DL~~ddv~ILD~~~~IyVWiG~~a~~~e 670 (873)
.|+||.+.+ ..|.+..+. .-+.+-+-|.++.|||||++..||+|+|..+++.-
T Consensus 601 yP~L~~~h~l~~~~~~~~~~~~~~~P~~l~ls~~~l~~~giyLlD~g~~i~lw~G~~v~~~l 662 (751)
T 3eh1_A 601 HPNLYRIDRLTDEGAVHVNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNF 662 (751)
T ss_dssp SCEEEECTTCCSTTCEEETTEEECCCCCBCSSGGGCCTTSEEEEECSSEEEEEECTTCCHHH
T ss_pred cceEEEeecCccccCcccCCCccCCCCcccCCHHHcccCCEEEEECCCEEEEEECCCCCHHH
Confidence 699999863 123222221 13457778999999999999999999999998643
No 38
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=88.23 E-value=0.85 Score=56.37 Aligned_cols=51 Identities=16% Similarity=0.353 Sum_probs=38.1
Q ss_pred CCeeEEEEec---CC------------ceEEeeecccccCCCCCCCEEEEeCCCeEEEEEcCCCCH
Q 002853 618 DPHLFTCTLT---EG------------DLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHSDL 668 (873)
Q Consensus 618 ~prLF~~s~~---~G------------~~~v~Ei~~F~Q~DL~~ddv~ILD~~~~IyVWiG~~a~~ 668 (873)
.|+||.+.+. .| .+.+-+-.+.+-+-|.++.+||||+|..||+|+|..+++
T Consensus 753 yP~L~s~h~~~~~~g~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~g~yLld~G~~i~lWvG~~~~p 818 (926)
T 1m2v_B 753 YPDVYSLHDMADEAGLPVQTEDGEATGTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVP 818 (926)
T ss_dssp SCEEEETTTCCSSCSCC---------CCCCCCCCBCSCSTTCCTTCEEEEECSSEEEEEECTTCCS
T ss_pred cCeEEEeccCcccccccccccccccccccccCCcccCcHHHhccCCEEEEECCCEEEEEecCCCCH
Confidence 5999987542 13 122222346777789999999999999999999999874
No 39
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=87.34 E-value=0.66 Score=57.33 Aligned_cols=31 Identities=26% Similarity=0.599 Sum_probs=28.4
Q ss_pred CCCccccCCCCceEEeeCCCeEEEEecCCCC
Q 002853 271 NSLNKDMLEKDKCYMLDCVNEVFVWTGRNTS 301 (873)
Q Consensus 271 ~~~~q~~L~~~~vyILD~g~eIyVWiG~~as 301 (873)
.+++.+.|+++.+||||+|..||+|+|+.++
T Consensus 787 l~Ls~~~l~~~g~yLld~G~~i~lWvG~~~~ 817 (926)
T 1m2v_B 787 INATSSLFERYGLYLIDNGNELFLWMGGDAV 817 (926)
T ss_dssp BCSCSTTCCTTCEEEEECSSEEEEEECTTCC
T ss_pred ccCcHHHhccCCEEEEECCCEEEEEecCCCC
Confidence 4678889999999999999999999999876
No 40
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=83.59 E-value=0.79 Score=55.45 Aligned_cols=31 Identities=19% Similarity=0.716 Sum_probs=27.7
Q ss_pred CCccccCCCCceEEeeCCCeEEEEecCCCCH
Q 002853 272 SLNKDMLEKDKCYMLDCVNEVFVWTGRNTSI 302 (873)
Q Consensus 272 ~~~q~~L~~~~vyILD~g~eIyVWiG~~as~ 302 (873)
+++-+-|.++.+||||+|..||||+|+.++.
T Consensus 630 ~ls~~~l~~~giyLlD~g~~i~lw~G~~v~~ 660 (751)
T 3eh1_A 630 KLSAEKLTREGAFLMDCGSVFYIWVGKGCDN 660 (751)
T ss_dssp CSSGGGCCTTSEEEEECSSEEEEEECTTCCH
T ss_pred cCCHHHcccCCEEEEECCCEEEEEECCCCCH
Confidence 3577899999999999999999999998764
No 41
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=83.32 E-value=1.8 Score=52.50 Aligned_cols=46 Identities=20% Similarity=0.275 Sum_probs=36.3
Q ss_pred CCeeEEEEecCCceEEeeecccccCCCCCCCEEEEeCCCeEEEEEcCCCC
Q 002853 618 DPHLFTCTLTEGDLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHSD 667 (873)
Q Consensus 618 ~prLF~~s~~~G~~~v~Ei~~F~Q~DL~~ddv~ILD~~~~IyVWiG~~a~ 667 (873)
.|+||.++.. |. -+-.+.+.+.|.++.|||||++..||||+|..+.
T Consensus 626 yP~L~~~~~~-~~---P~~v~Ls~~~l~~~gi~LLD~g~~i~i~~G~~v~ 671 (768)
T 1m2o_A 626 QPTLTSFSME-DD---PQPVLLDSISVKPNTILLLDTFFFILIYHGEQIA 671 (768)
T ss_dssp SCEEEEECSS-SC---CEECCSBGGGCCTTCEEEEECSSEEEEEECHHHH
T ss_pred CCeEEEecCC-CC---CcceeCcHHHcCCCCEEEEECCCEEEEEECCcch
Confidence 5999998764 32 1234677888999999999999999999997543
No 42
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=80.30 E-value=2.2 Score=51.72 Aligned_cols=45 Identities=20% Similarity=0.411 Sum_probs=35.8
Q ss_pred CCeeEEEEecCCceEEeeecccccCCCCCCCEEEEeCCCeEEEEEcCCC
Q 002853 618 DPHLFTCTLTEGDLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHS 666 (873)
Q Consensus 618 ~prLF~~s~~~G~~~v~Ei~~F~Q~DL~~ddv~ILD~~~~IyVWiG~~a 666 (873)
.|+||.+++. |. -+-.+.+-+.|.++.|||||++..||||+|..+
T Consensus 624 yP~L~~~~~~-~~---P~~v~ls~~~l~~~gi~LLD~g~~i~i~~G~~v 668 (769)
T 2nut_A 624 QPILYAYSFS-GP---PEPVLLDSSSILADRILLMDTFFQILIYHGETI 668 (769)
T ss_dssp SCEEEEECSS-SS---CEECCSSGGGCCTTCEEEEECSSEEEEEECHHH
T ss_pred cCEEEeccCC-CC---CCceeCCHHHccCCCEEEEECCCEEEEEECCcc
Confidence 5999998763 31 122467888899999999999999999999755
No 43
>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}
Probab=63.42 E-value=15 Score=34.85 Aligned_cols=89 Identities=11% Similarity=0.205 Sum_probs=57.6
Q ss_pred ccEEEEEEECC--eEeecCCC--CC----CccccCCeEEEEeeeecCC-CCCceEEEEEccCCcCchhhhHHHHHHHHHH
Q 002853 19 LGLEIWCIENL--QLVSVPKS--SH----GKFYTGSAYVILNTALLKS-GPPQHDIHYWLGNDVNEEDSTLVSDKALELD 89 (873)
Q Consensus 19 ~gl~iWrIe~~--~~~~vp~~--~~----G~Fy~gdsYIVl~t~~~~~-g~~~~~i~~W~G~~ss~de~g~AA~~aveLd 89 (873)
...-|..|++. .++..... .| ..|=.++|.-++|.+...+ .+..+.+..|+|..++.-.++..|..-..|-
T Consensus 33 ~~wi~~~i~~~~~~l~v~~~G~~~~~e~~~~L~~~~~~Y~~~r~~~~~~~~~K~vfI~W~pd~a~v~~Km~yas~k~~lk 112 (146)
T 1x67_A 33 TDWALFTYEGNSNDIRVAGTGEGGLEEMVEELNSGKVMYAFCRVKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMA 112 (146)
T ss_dssp CSEEEEEESSSSSCEEEEEEESSCHHHHHHHCCTTSEEEEEEEEECSSSCSEEEEEEEEECTTSCHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEeCCCcEEEEEeccCCCHHHHHhhCCCCceEEEEEEEEcCCCCeeeEEEEEECCCCCChhheeeehhhHHHHH
Confidence 45677788775 33322111 11 1233455554555554333 3446677789999999999999999999999
Q ss_pred HHhCCCceEEEeeccCCcHHH
Q 002853 90 AALGSCTVQYREVQGQETEKF 110 (873)
Q Consensus 90 ~~lgg~~vq~Re~QG~Es~~F 110 (873)
+.|+| +++ ++|..++.++
T Consensus 113 ~~l~g--~~~-ei~at~~~el 130 (146)
T 1x67_A 113 SFLKG--AHV-TINARAEEDV 130 (146)
T ss_dssp HHTTT--EEE-EECCCSGGGG
T ss_pred HhcCC--cEE-EEEeCChHHC
Confidence 99987 343 6788777653
No 44
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=47.98 E-value=40 Score=31.42 Aligned_cols=87 Identities=14% Similarity=0.212 Sum_probs=53.5
Q ss_pred ccEEEEEEEC--CeEeecCC---CCC----CccccCC-eEEEEeeee--cCCC-C--CceEEEEEccCCcCchhhhHHHH
Q 002853 19 LGLEIWCIEN--LQLVSVPK---SSH----GKFYTGS-AYVILNTAL--LKSG-P--PQHDIHYWLGNDVNEEDSTLVSD 83 (873)
Q Consensus 19 ~gl~iWrIe~--~~~~~vp~---~~~----G~Fy~gd-sYIVl~t~~--~~~g-~--~~~~i~~W~G~~ss~de~g~AA~ 83 (873)
...-|..|++ ..++.... ..+ ..|=.++ +|++ |.+. ...| . ..+.+.+|++..++..++..-|.
T Consensus 25 ~~~ii~~i~~~~~~i~v~~~g~~~~~~el~~~L~~~~~rY~~-~~~~~~~~~~~~~~~k~vfI~w~Pd~a~v~~KmlyAs 103 (143)
T 1cfy_A 25 YKFILFGLNDAKTEIVVKETSTDPSYDAFLEKLPENDCLYAI-YDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYAS 103 (143)
T ss_dssp CSEEEEEECTTSSEEEEEEEECCCCHHHHHTTSCTTCCEEEE-EEEEEECSSSCCEEEEEEEEEECCTTSCHHHHHHHHH
T ss_pred eeEEEEEEcCCCCEEEEEecCCCCCHHHHHHhCCCCCcEEEE-EEeeeecCCCcccccCEEEEEECCCCCChhheeehHh
Confidence 4567888876 23332221 122 1233344 5655 4443 2223 2 34566789999999999999988
Q ss_pred HHHHHHHHhCCCceEEEeeccCCcHH
Q 002853 84 KALELDAALGSCTVQYREVQGQETEK 109 (873)
Q Consensus 84 ~aveLd~~lgg~~vq~Re~QG~Es~~ 109 (873)
.-..|-+.|+|-.+ ++|..++.+
T Consensus 104 sk~~l~~~l~g~~~---~i~a~d~~e 126 (143)
T 1cfy_A 104 SKDALRRALNGVST---DVQGTDFSE 126 (143)
T ss_dssp HHHHHHHHCTTCCE---EEEESSGGG
T ss_pred hHHHHHHhcCCceE---EEEeCChHH
Confidence 88888999977544 566666654
No 45
>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}
Probab=47.48 E-value=46 Score=31.33 Aligned_cols=64 Identities=20% Similarity=0.282 Sum_probs=46.9
Q ss_pred eeeeccEEEEEeec--CCCCcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCCceEEEeeccCCcH
Q 002853 411 KLFSGDCYIVKYTY--PGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPV 477 (873)
Q Consensus 411 ~FysgdcYIvl~ty--~~~~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~vq~Rv~QGkEp~ 477 (873)
+|-.++|.-.+|.+ ....+.+.++..|.|..+....+...|..-..|.+.++|-. + .+|..++.
T Consensus 63 ~L~~~~~~Y~~~r~~~~~~~~~K~vfI~W~pd~a~v~~Km~yas~k~~lk~~l~g~~--~-ei~at~~~ 128 (146)
T 1x67_A 63 ELNSGKVMYAFCRVKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGAH--V-TINARAEE 128 (146)
T ss_dssp HCCTTSEEEEEEEEECSSSCSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTEE--E-EECCCSGG
T ss_pred hCCCCceEEEEEEEEcCCCCeeeEEEEEECCCCCChhheeeehhhHHHHHHhcCCcE--E-EEEeCChH
Confidence 35566776666666 33456788899999999999999888888888888887643 3 45666554
No 46
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=43.87 E-value=52 Score=30.57 Aligned_cols=89 Identities=9% Similarity=-0.003 Sum_probs=53.6
Q ss_pred cccEEEEEEECCeEeecCC-C-CC----CccccCCeEEEEeeeecCC-CCCceEEEEEccCCcCchhhhHHHHHHHHHHH
Q 002853 18 KLGLEIWCIENLQLVSVPK-S-SH----GKFYTGSAYVILNTALLKS-GPPQHDIHYWLGNDVNEEDSTLVSDKALELDA 90 (873)
Q Consensus 18 ~~gl~iWrIe~~~~~~vp~-~-~~----G~Fy~gdsYIVl~t~~~~~-g~~~~~i~~W~G~~ss~de~g~AA~~aveLd~ 90 (873)
....-|..|++.+.+.|.. . .+ ..|=+++|--++|.+...+ .+..+.+.+|+|..++..++..-|-.-..|-+
T Consensus 29 ~~~~ii~~i~~~~~i~v~~~g~~~~el~~~l~~~~~rY~~~~~~~~~~~~~k~vfI~w~Pd~~~vk~Kmlyas~k~~l~~ 108 (141)
T 1hqz_1 29 DTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVAN 108 (141)
T ss_dssp TCCEEEEEECTTSCEEEEEEESCHHHHHTCCCTTSCEEEEEEECCTTCSCCEEEEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEcCCCEEEEEeecCCHHHHHhhCCCCceEEEEEEEecCCCceeeEEEEEECCCCCChhheEEEeccHHHHHH
Confidence 3566788888732222221 0 12 2343444444445554222 33466777899999999999888877777886
Q ss_pred -HhCCCceEEEeeccCCcHH
Q 002853 91 -ALGSCTVQYREVQGQETEK 109 (873)
Q Consensus 91 -~lgg~~vq~Re~QG~Es~~ 109 (873)
.|+|-.+ ++|..++.+
T Consensus 109 ~~l~g~~~---~i~a~~~~e 125 (141)
T 1hqz_1 109 NLFKGYHV---QVTARDEDD 125 (141)
T ss_dssp HTSCSCSE---EEEESSGGG
T ss_pred HhCCceEE---EEEECChHH
Confidence 8876554 456555543
No 47
>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2
Probab=43.01 E-value=48 Score=30.93 Aligned_cols=91 Identities=20% Similarity=0.189 Sum_probs=57.6
Q ss_pred ccEEEEEEECCeEeecCCCC--------CC----cc--ccCCeEEEEeeeecCCCCCceEEEEEccCCcCchhhhHHHHH
Q 002853 19 LGLEIWCIENLQLVSVPKSS--------HG----KF--YTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDK 84 (873)
Q Consensus 19 ~gl~iWrIe~~~~~~vp~~~--------~G----~F--y~gdsYIVl~t~~~~~g~~~~~i~~W~G~~ss~de~g~AA~~ 84 (873)
...-|..|++...+...... |- .+ -...||+|+.--...+......+.+|.+..++...+..-|.-
T Consensus 25 ~~~ii~~i~~~~ivv~~~~~~~~~~~~~~~e~~~~l~~~~~~rY~~~~~~~~~~~~~k~vfI~w~Pd~a~vr~KMlYAss 104 (142)
T 1m4j_A 25 YRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQNAQGYEWIFIAWSPDHSHVRQKMLYAAT 104 (142)
T ss_dssp CSEEEEEECSSSEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETTEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred eEEEEEEEcCCEEEEEeecCCCccccccHHHHHHhhCCCCCceEEEEEcCcCCCCCceEEEEEEcCCCCCHHHHHHHHHH
Confidence 45678888876544332111 11 22 234678875432211222456677899999999999888877
Q ss_pred HHHHHHHhCCCceEEEeeccCCcHHH
Q 002853 85 ALELDAALGSCTVQYREVQGQETEKF 110 (873)
Q Consensus 85 aveLd~~lgg~~vq~Re~QG~Es~~F 110 (873)
-..|-+.|+|..+. .++|..++.++
T Consensus 105 k~~lk~~l~g~~~~-~~i~atd~~el 129 (142)
T 1m4j_A 105 RATLKKEFGGGHIK-DEVFGTVKEDV 129 (142)
T ss_dssp HHHHHHHHCGGGEE-EEEEESSHHHH
T ss_pred HHHHHHHcCCceeE-EEEEeCChHHC
Confidence 78888999986552 35677776553
No 48
>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}
Probab=40.46 E-value=69 Score=30.82 Aligned_cols=77 Identities=9% Similarity=0.163 Sum_probs=50.0
Q ss_pred cCCeEEEEee-eecCCC-CCceEEEEEccCCcCchhhhHHHHHHHHHHHHhCCCceEEEeeccCCcHHH------HhhhC
Q 002853 44 TGSAYVILNT-ALLKSG-PPQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKF------LSYFR 115 (873)
Q Consensus 44 ~gdsYIVl~t-~~~~~g-~~~~~i~~W~G~~ss~de~g~AA~~aveLd~~lgg~~vq~Re~QG~Es~~F------l~~Fk 115 (873)
+.-+|+++.- |...++ +....+.+|.+..++...+..-|.--..|-+.|+|-.. ++|..++..+ +.-.+
T Consensus 78 ~~prY~vy~~~~~~~~~~~~klvfI~W~Pd~a~vr~KMlYAssk~~lk~~l~gi~~---~i~atd~~el~~~~~i~ekl~ 154 (166)
T 1tvj_A 78 NDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKH---EWQVNGLDDIKDRSTLGEKLG 154 (166)
T ss_dssp TSCEEEEEEEEEEESSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCC---EEEESSGGGTCCHHHHHHHHT
T ss_pred CCcEEEEEeccccCCCCCccCEEEEEECCCCCCHHHhhHHHHhHHHHHHHhcCCeE---EEEECChHHcCCHHHHHHHhC
Confidence 4456776443 223333 23456678999999999998888777888899987433 6677777665 44333
Q ss_pred -CcEEEecC
Q 002853 116 -PCIIPLDG 123 (873)
Q Consensus 116 -~~ii~~~G 123 (873)
..++-++|
T Consensus 155 ~~~~~~~~~ 163 (166)
T 1tvj_A 155 GNVVVSLEG 163 (166)
T ss_dssp CTTEEEETT
T ss_pred CCceeeecC
Confidence 44555655
No 49
>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}
Probab=39.70 E-value=53 Score=30.26 Aligned_cols=90 Identities=13% Similarity=0.123 Sum_probs=56.8
Q ss_pred ccEEEEEEECCeEeecCCCC--------CC----cc--ccCCeEEEEeeeecCCCCCceEEEEEccCCcCchhhhHHHHH
Q 002853 19 LGLEIWCIENLQLVSVPKSS--------HG----KF--YTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDK 84 (873)
Q Consensus 19 ~gl~iWrIe~~~~~~vp~~~--------~G----~F--y~gdsYIVl~t~~~~~g~~~~~i~~W~G~~ss~de~g~AA~~ 84 (873)
...-|..|++...+...... +- .+ -..-||+|+.--....+.....+.+|.+..++...+..-|.-
T Consensus 22 ~r~ii~~i~~~~ivv~~~~~~~~~~~~~~~~~~~~l~~~~~prY~v~~~~~~~~~~~k~vfI~w~Pd~a~vr~KMlYAss 101 (134)
T 2vac_A 22 VRLIKVVIEDEQLVLGASQEPVGRWDQDYDRAVLPLLDAQQPCYLLYRLDSQNAQGFEWLFLAWSPDNSPVRLKMLYAAT 101 (134)
T ss_dssp CSEEEEEEETTEEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETTEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred eEEEEEEecCCEEEEEeecCcCcccccCHHHHHHhcCCCCCCEEEEEECCcCCCCCceEEEEEEcCCCCCHHHHhHHHHH
Confidence 45678888877554432111 11 22 234678775432211222456677899999999999888877
Q ss_pred HHHHHHHhCCCceEEEeeccCCcHH
Q 002853 85 ALELDAALGSCTVQYREVQGQETEK 109 (873)
Q Consensus 85 aveLd~~lgg~~vq~Re~QG~Es~~ 109 (873)
-..|-+.|+|..+ ..++|..++..
T Consensus 102 k~~lk~~l~g~~~-~~~i~atd~~e 125 (134)
T 2vac_A 102 RATVKKEFGGGHI-KDELFGTVKDD 125 (134)
T ss_dssp HHHHHHHHCGGGE-EEEEEESSHHH
T ss_pred HHHHHHHcCCCee-eEEEEeCChHH
Confidence 7888899988654 22567777655
No 50
>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}
Probab=36.44 E-value=63 Score=30.25 Aligned_cols=61 Identities=11% Similarity=0.195 Sum_probs=42.2
Q ss_pred CCeEEEEe-eeecCCCC-CceEEEEEccCCcCchhhhHHHHHHHHHHHHhCCCceEEEeeccCCcHH
Q 002853 45 GSAYVILN-TALLKSGP-PQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEK 109 (873)
Q Consensus 45 gdsYIVl~-t~~~~~g~-~~~~i~~W~G~~ss~de~g~AA~~aveLd~~lgg~~vq~Re~QG~Es~~ 109 (873)
.-||+++. .|...++. ....+.+|++..++..++..-|..-..|-+.|+| +.++|...+.+
T Consensus 61 ~prY~~y~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyassk~~lk~~l~~----~~~i~a~d~~e 123 (144)
T 2kvk_A 61 KPCYVAFDFEYNDAGSKREKLILIQWIPDTARPREKMMYSASRDALSSVSEG----YLPIQANDESG 123 (144)
T ss_dssp SCCEEEEEEEEEETTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTT----EEEEEESSGGG
T ss_pred CceEEEEEeeeccCCCCcccEEEEEECCCCCCHHHHHHHHHHHHHHHHhcCC----EEEEEECChHH
Confidence 45687753 33333332 2355678999999999999888777788889987 24677766554
No 51
>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2
Probab=34.31 E-value=1e+02 Score=28.65 Aligned_cols=61 Identities=11% Similarity=0.185 Sum_probs=39.8
Q ss_pred cEEEEEeec--CCCCcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCCceEEEeeccCCcHH
Q 002853 416 DCYIVKYTY--PGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQ 478 (873)
Q Consensus 416 dcYIvl~ty--~~~~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~vq~Rv~QGkEp~~ 478 (873)
-||+ +|.| ....+...++.+|.+..+....+..-|..-..|...++|..+ ...+|..++.+
T Consensus 66 ~rY~-~~~~~~~~~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~-~~~i~atd~~e 128 (142)
T 1m4j_A 66 PCYV-LFRLDSQNAQGYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHI-KDEVFGTVKED 128 (142)
T ss_dssp CEEE-EEEEEEEETTEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGE-EEEEEESSHHH
T ss_pred ceEE-EEEcCcCCCCCceEEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCcee-EEEEEeCChHH
Confidence 5665 4444 334456778889999999999987655555667777776543 22456665543
No 52
>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2
Probab=32.43 E-value=49 Score=30.71 Aligned_cols=88 Identities=13% Similarity=0.139 Sum_probs=55.6
Q ss_pred ccEEEEEEECC--eEeecCCC----CC----CccccCCe-EEEEee-eecCCCC--CceEEEEEccCCcCchhhhHHHHH
Q 002853 19 LGLEIWCIENL--QLVSVPKS----SH----GKFYTGSA-YVILNT-ALLKSGP--PQHDIHYWLGNDVNEEDSTLVSDK 84 (873)
Q Consensus 19 ~gl~iWrIe~~--~~~~vp~~----~~----G~Fy~gds-YIVl~t-~~~~~g~--~~~~i~~W~G~~ss~de~g~AA~~ 84 (873)
...-|..|++. .++..... .+ ..|=.++| |+++.- +....|+ ..+.+.+|+|..++..++..-|..
T Consensus 27 ~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~~k~vfI~w~P~~a~v~~KmlyAss 106 (139)
T 1f7s_A 27 HRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASS 106 (139)
T ss_dssp CSEEEEEEETTTTEEEEEEECCSSCCHHHHHTTSCTTSCEEEEEEEEEECTTSCEEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred cEEEEEEECCCCcEEEEEeecCCCCCHHHHHHhCCCCCceEEEEEeeeeccccCcccCEEEEEECCCCCChhHheehHHh
Confidence 45678899875 44332211 11 23555667 776543 2233332 345667899999999999988877
Q ss_pred HHHHHHHhCCCceEEEeeccCCcHH
Q 002853 85 ALELDAALGSCTVQYREVQGQETEK 109 (873)
Q Consensus 85 aveLd~~lgg~~vq~Re~QG~Es~~ 109 (873)
-..|-+.|+|..+ ++|..++.+
T Consensus 107 k~~l~~~l~g~~v---~i~a~d~~e 128 (139)
T 1f7s_A 107 KDRFKRELDGIQV---ELQATDPTE 128 (139)
T ss_dssp HHHHHTTCTTCCE---EEEECCTTC
T ss_pred HHHHHHhcCCeEE---EEEECChHH
Confidence 7888888987654 456555543
No 53
>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}
Probab=30.58 E-value=1.3e+02 Score=27.58 Aligned_cols=61 Identities=13% Similarity=0.152 Sum_probs=39.4
Q ss_pred cEEEEEeec--CCCCcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCCceEEEeeccCCcHH
Q 002853 416 DCYIVKYTY--PGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQ 478 (873)
Q Consensus 416 dcYIvl~ty--~~~~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~vq~Rv~QGkEp~~ 478 (873)
-||+ +|.| ....+...++.+|.+..+....+..-|..-..|.+.++|..+ ...+|..++..
T Consensus 63 prY~-v~~~~~~~~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~-~~~i~atd~~e 125 (134)
T 2vac_A 63 PCYL-LYRLDSQNAQGFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHI-KDELFGTVKDD 125 (134)
T ss_dssp CEEE-EEEEEEEETTEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGE-EEEEEESSHHH
T ss_pred CEEE-EEECCcCCCCCceEEEEEEcCCCCCHHHHhHHHHHHHHHHHHcCCCee-eEEEEeCChHH
Confidence 4564 4455 333456778889999999999986655555667777776543 22355555543
No 54
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=29.34 E-value=1.2e+02 Score=27.95 Aligned_cols=63 Identities=19% Similarity=0.279 Sum_probs=40.4
Q ss_pred eeeccEEEEEeecC--CC----CcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCCceEEEeeccCCcH
Q 002853 412 LFSGDCYIVKYTYP--GN----GRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPV 477 (873)
Q Consensus 412 FysgdcYIvl~ty~--~~----~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~vq~Rv~QGkEp~ 477 (873)
|-.++|--++|.|. .. .+...++.+|.|..+....+..-|..-..|.+.++|-.+ .+|..++.
T Consensus 57 L~~~~~rY~~~~~~~~~~~~~~~~~k~vfI~w~Pd~a~v~~KmlyAssk~~l~~~l~g~~~---~i~a~d~~ 125 (143)
T 1cfy_A 57 LPENDCLYAIYDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVST---DVQGTDFS 125 (143)
T ss_dssp SCTTCCEEEEEEEEEECSSSCCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTCCE---EEEESSGG
T ss_pred CCCCCcEEEEEEeeeecCCCcccccCEEEEEECCCCCChhheeehHhhHHHHHHhcCCceE---EEEeCChH
Confidence 33455555566653 22 235677889999999999998766666677777765433 34444443
No 55
>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}
Probab=27.22 E-value=92 Score=28.64 Aligned_cols=89 Identities=12% Similarity=0.158 Sum_probs=52.6
Q ss_pred cccEEEEEEEC--CeEeecC---CCCCC----ccccC-CeEEEEeeee--cCCC-CCceEEEEEccCCcCchhhhHHHHH
Q 002853 18 KLGLEIWCIEN--LQLVSVP---KSSHG----KFYTG-SAYVILNTAL--LKSG-PPQHDIHYWLGNDVNEEDSTLVSDK 84 (873)
Q Consensus 18 ~~gl~iWrIe~--~~~~~vp---~~~~G----~Fy~g-dsYIVl~t~~--~~~g-~~~~~i~~W~G~~ss~de~g~AA~~ 84 (873)
....-|..|++ ...+... ...+- .+=.+ -+|+++ .+. ..+| +....+.+|++..++..++..-|..
T Consensus 24 ~~~~ii~~i~~~~~~i~v~~~~~~~~~~el~~~L~~~~~rY~~~-~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyass 102 (137)
T 2i2q_A 24 SLRYVVFKMNDTKTEIVVEKKSTDKDFDTFLGDLPEKDCRYAIY-DFEFNLGEGVRNKIIFISWSPDVAPIKSKMVYSSS 102 (137)
T ss_dssp CCSEEEEEECTTSSEEEEEEEECCCCHHHHHHTSCSSSCEEEEE-EEEECSSSSCEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred CceEEEEEECCCCcEEEEecCCCCCCHHHHHHhCCCcCceEEEE-EeeeecCCCCccCEEEEEECCCCCChhHhhhhHHH
Confidence 34677888876 2333221 11221 22233 456654 443 2233 2345667899999999999888887
Q ss_pred HHHHHHHhCCCceEEEeeccCCcHHH
Q 002853 85 ALELDAALGSCTVQYREVQGQETEKF 110 (873)
Q Consensus 85 aveLd~~lgg~~vq~Re~QG~Es~~F 110 (873)
-..|-+.|+|-. .++|..++.++
T Consensus 103 k~~l~~~l~g~~---~~i~a~d~~el 125 (137)
T 2i2q_A 103 KDTLRRAFTGIG---TDIQATDFSEV 125 (137)
T ss_dssp HHHHHTTCCCCC---EEEEECCCC--
T ss_pred HHHHHHHhcCce---EEEEECChHHc
Confidence 788888887643 35677666554
No 56
>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}
Probab=26.58 E-value=1e+02 Score=28.86 Aligned_cols=60 Identities=12% Similarity=0.113 Sum_probs=40.3
Q ss_pred cCCeEEEEee-eecCCCCC--ceEEEEEccCCcCchhhhHHHHHHHHHHHHhCCCceEEEeeccCC
Q 002853 44 TGSAYVILNT-ALLKSGPP--QHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQE 106 (873)
Q Consensus 44 ~gdsYIVl~t-~~~~~g~~--~~~i~~W~G~~ss~de~g~AA~~aveLd~~lgg~~vq~Re~QG~E 106 (873)
+.-+|+++.- +....|+. ...+.+|++..++..++..-|.--..|-+.|+|-.+ ++|..+
T Consensus 70 ~~prY~~y~~~~~~~~g~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~---~i~atd 132 (148)
T 2xfa_A 70 TECRYIIADMPIPTPEGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFK---SLEITC 132 (148)
T ss_dssp TBCEEEEEEEEECCSSCCCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSE---EEEECS
T ss_pred CCcEEEEEecccccCCCCcccCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeE---EEEEEc
Confidence 3456766432 22233433 455668999999999998888877888888977554 555555
No 57
>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A
Probab=26.20 E-value=1.4e+02 Score=27.25 Aligned_cols=61 Identities=15% Similarity=0.226 Sum_probs=41.5
Q ss_pred CCeEEEEeeee--cCCC-CCceEEEEEccCCcCchhhhHHHHHHHHHHHHhCCCceEEEeeccCCcHH
Q 002853 45 GSAYVILNTAL--LKSG-PPQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEK 109 (873)
Q Consensus 45 gdsYIVl~t~~--~~~g-~~~~~i~~W~G~~ss~de~g~AA~~aveLd~~lgg~~vq~Re~QG~Es~~ 109 (873)
.-+|++ |.+. ..+| +....+.+|++..++..++..-|..-..|-+.|+|-.+ ++|..++..
T Consensus 59 ~~rY~~-~~~~~~~~~~~~~k~vfI~w~Pd~a~v~~Kmlyassk~~l~~~l~g~~~---~i~a~~~~e 122 (137)
T 1cnu_A 59 DCRYAI-FDYEFQVDGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQV---EVQATDAAE 122 (137)
T ss_dssp SCEEEE-EEEEEEETTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHSTTCCE---EEEECSTTT
T ss_pred CceEEE-EEeeeecCCCCccCEEEEEECCCCCChHHheehHHhHHHHHHHhcCceE---EEEECChHH
Confidence 345665 4443 2223 23566778999999999999888888888899976533 556665543
No 58
>2kd5_A ADF H, actin severing and dynamics regulatory protein; cofilin, solution structure, hormone; NMR {Leishmania donovani} PDB: 2kvk_A
Probab=25.59 E-value=52 Score=30.77 Aligned_cols=53 Identities=9% Similarity=0.258 Sum_probs=33.5
Q ss_pred eeeccEEEEEeec--CCC--CcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCC
Q 002853 412 LFSGDCYIVKYTY--PGN--GRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGE 464 (873)
Q Consensus 412 FysgdcYIvl~ty--~~~--~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~ 464 (873)
|-.++|--++|.| ... .+...++.+|.|..+....+..-|..-..|.+.++|-
T Consensus 57 L~~~~~rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyAssk~~l~~~l~g~ 113 (144)
T 2kd5_A 57 FSTEKPCYVAFDFEYNDAGSKREKLILIQWIPDTARPREKMMYSASRDALSSVSEGY 113 (144)
T ss_dssp TSCSSCEEEEEEEEEESSSCEEEEEEEEEECCCCSCSHHHHHHHHHGGGGTTTTCCS
T ss_pred CCccCcEEEEEEEEecCCCCCccCEEEEEECCCCCCHHHHhhhHHHHHHHHHHhCCe
Confidence 3344443334444 322 3567778899999999988876555555666666653
No 59
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=25.24 E-value=2e+02 Score=26.41 Aligned_cols=56 Identities=14% Similarity=0.189 Sum_probs=38.3
Q ss_pred eeeeccEEEEEeecC--CCCcceEEEEEEcCCCCCHHHHHHHHHHHHHHHH-hccCCce
Q 002853 411 KLFSGDCYIVKYTYP--GNGRDENVIYAWFGHESMTEDRAAAISHMSAIVD-STRGEAV 466 (873)
Q Consensus 411 ~FysgdcYIvl~ty~--~~~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~-~~~~~~v 466 (873)
.|-.++|--++|.|. +..+...++.+|.|..+...++..-|..-..|.+ .++|-.+
T Consensus 58 ~l~~~~~rY~~~~~~~~~~~~~k~vfI~w~Pd~~~vk~Kmlyas~k~~l~~~~l~g~~~ 116 (141)
T 1hqz_1 58 LFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHV 116 (141)
T ss_dssp CCCTTSCEEEEEEECCTTCSCCEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTSCSCSE
T ss_pred hCCCCceEEEEEEEecCCCceeeEEEEEECCCCCChhheEEEeccHHHHHHHhCCceEE
Confidence 344556655566774 3345788888999999999988776665566665 6655433
No 60
>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A
Probab=23.56 E-value=1.5e+02 Score=27.46 Aligned_cols=58 Identities=10% Similarity=0.123 Sum_probs=43.3
Q ss_pred ceeeeccEEEEEeecC--C--CCcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCCceE
Q 002853 410 MKLFSGDCYIVKYTYP--G--NGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVM 467 (873)
Q Consensus 410 G~FysgdcYIvl~ty~--~--~~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~vq 467 (873)
.+|-.++|.-.+|.+. . ..+.+.++..|.|..+....++..+.+...+.+.|+|-.++
T Consensus 49 ~~L~~~~~~Ya~~r~~~~~~~~~~~K~vfI~W~pd~~~~~~K~~~as~k~~vk~~l~g~~~~ 110 (141)
T 1t3y_A 49 QQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKE 110 (141)
T ss_dssp HHCCTTCEEEEEEEEEECSGGGCEEEEEEEEEECTTSCHHHHHHHHHHHHHHTTTSCCCSEE
T ss_pred hhCCCCceEEEEEEEEecCCCCceeeEEEEEECCCCCCHHHhhhHHHHHHHHHHHhcccEEE
Confidence 3455677766666663 1 24678888899999999999998888888888888765543
No 61
>2kd5_A ADF H, actin severing and dynamics regulatory protein; cofilin, solution structure, hormone; NMR {Leishmania donovani} PDB: 2kvk_A
Probab=22.49 E-value=44 Score=31.30 Aligned_cols=87 Identities=14% Similarity=0.190 Sum_probs=52.1
Q ss_pred ccEEEEEEECC-eEeecCC-----CCC----CccccC-CeEEEEe-eeecCCC-CCceEEEEEccCCcCchhhhHHHHHH
Q 002853 19 LGLEIWCIENL-QLVSVPK-----SSH----GKFYTG-SAYVILN-TALLKSG-PPQHDIHYWLGNDVNEEDSTLVSDKA 85 (873)
Q Consensus 19 ~gl~iWrIe~~-~~~~vp~-----~~~----G~Fy~g-dsYIVl~-t~~~~~g-~~~~~i~~W~G~~ss~de~g~AA~~a 85 (873)
...-|..|++. +.+.|.. ..+ ..|=++ -+|+++. .+...++ .....+.+|+|..++..++..-|..-
T Consensus 24 ~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyAssk 103 (144)
T 2kd5_A 24 SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDAGSKREKLILIQWIPDTARPREKMMYSASR 103 (144)
T ss_dssp SSEEEEEECSSSCBEEEEEECCSCCCHHHHTTTTSCSSCEEEEEEEEEESSSCEEEEEEEEEECCCCSCSHHHHHHHHHG
T ss_pred eeEEEEEECCCCCEEEEEeccCCCCCHHHHHHhCCccCcEEEEEEEEecCCCCCccCEEEEEECCCCCCHHHHhhhHHHH
Confidence 56788888752 2222221 111 123333 4676653 2232222 23566778999999999998877777
Q ss_pred HHHHHHhCCCceEEEeeccCCcHH
Q 002853 86 LELDAALGSCTVQYREVQGQETEK 109 (873)
Q Consensus 86 veLd~~lgg~~vq~Re~QG~Es~~ 109 (873)
..|-+.|+|- .++|..++.+
T Consensus 104 ~~l~~~l~g~----~~i~a~d~~e 123 (144)
T 2kd5_A 104 DALSSVSEGY----LPIQANDESG 123 (144)
T ss_dssp GGGTTTTCCS----EEEEESSSSS
T ss_pred HHHHHHhCCe----EEEEECChHH
Confidence 7777888874 5566666554
No 62
>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A
Probab=21.96 E-value=2.2e+02 Score=25.96 Aligned_cols=53 Identities=19% Similarity=0.305 Sum_probs=35.3
Q ss_pred eeeccEEEEEeecC--CC-C-cceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCC
Q 002853 412 LFSGDCYIVKYTYP--GN-G-RDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGE 464 (873)
Q Consensus 412 FysgdcYIvl~ty~--~~-~-~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~ 464 (873)
|-.++|--++|.|. .. + +...++.+|.|..+...++..-|..-..|.+.++|-
T Consensus 55 L~~~~~rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~v~~Kmlyassk~~l~~~l~g~ 111 (137)
T 1cnu_A 55 LPERDCRYAIFDYEFQVDGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGI 111 (137)
T ss_dssp SCTTSCEEEEEEEEEEETTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHSTTC
T ss_pred CCCCCceEEEEEeeeecCCCCccCEEEEEECCCCCChHHheehHHhHHHHHHHhcCc
Confidence 33445544455552 22 2 467788899999999999977666666677777654
No 63
>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}
Probab=21.45 E-value=2.9e+02 Score=25.53 Aligned_cols=55 Identities=18% Similarity=0.264 Sum_probs=36.0
Q ss_pred eeeccEEEEEeecC--C-CC--cceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCCce
Q 002853 412 LFSGDCYIVKYTYP--G-NG--RDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAV 466 (873)
Q Consensus 412 FysgdcYIvl~ty~--~-~~--~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~v 466 (873)
|-.++|=-++|.|. . ++ +...++.+|.+..+....+..-|..-..|.+.++|-.+
T Consensus 67 L~~~~prY~~y~~~~~~~~g~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~ 126 (148)
T 2xfa_A 67 LKNTECRYIIADMPIPTPEGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFK 126 (148)
T ss_dssp CBTTBCEEEEEEEEECCSSCCCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSE
T ss_pred CCcCCcEEEEEecccccCCCCcccCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeE
Confidence 33455544456652 2 22 45677789999999999987666655667777755443
No 64
>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}
Probab=20.16 E-value=2.2e+02 Score=26.41 Aligned_cols=57 Identities=16% Similarity=0.392 Sum_probs=36.1
Q ss_pred EEEEE-eecC--CCCcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHhccCCceEEEeeccCCcH
Q 002853 417 CYIVK-YTYP--GNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPV 477 (873)
Q Consensus 417 cYIvl-~ty~--~~~~~~~~iy~W~G~~ss~~e~~~aa~~a~~l~~~~~~~~vq~Rv~QGkEp~ 477 (873)
||++. |.|. +..+...++.+|.+..+....+..-|..-..|...++|. ..+|...+.
T Consensus 63 rY~~y~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyassk~~lk~~l~~~----~~i~a~d~~ 122 (144)
T 2kvk_A 63 CYVAFDFEYNDAGSKREKLILIQWIPDTARPREKMMYSASRDALSSVSEGY----LPIQANDES 122 (144)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTE----EEEEESSGG
T ss_pred eEEEEEeeeccCCCCcccEEEEEECCCCCCHHHHHHHHHHHHHHHHhcCCE----EEEEECChH
Confidence 56542 3442 233456778899999999999976555555677777652 345555544
Done!