Your job contains 1 sequence.
>002854
MEQSKLAAESHIKEISARWDPAEACRPIIDEAPVFYPTVEEFEDTLGYIAKIRSKAESFG
ICRIVPPSSWTPPCPLKAKNIWENAKFSTRIQQIDLLQNREPMRKKIRSRKRKRRRQSRM
GSTRRNANSSSEANAAETDEKFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDG
FEHKRLEPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQY
AMSGWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWG
DPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQH
SGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLF
GSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKL
QKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYS
TDELNTLVEALEGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQKESSS
SSPRVENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQVMNKK
AKVKHEVCIDLNMDVIPDGNESKLLLSDSHGKEAIENLKAHLSACYQEKVLCSGTVKEQD
TMQVRSDCNSSNSHKDPNKDQPSCSRVIEGTCSFDVKKLFGVDLSLPHQQSKLPLVDFLK
TDTINGSNVRTSVTDQRFQKKLETCVEPINFGCVMCGKLWCSKQAIFPKGFRSRVNFYSV
LNPEKVCNYISEVLDAGLLGPLFKVEFLYLNCP
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002854
(873 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2128659 - symbol:JMJ14 "JUMONJI 14" species:37... 1931 3.6e-222 2
TAIR|locus:2196979 - symbol:JMJ18 "Jumonji domain-contain... 1858 2.1e-215 2
TAIR|locus:2025635 - symbol:PKDM7D species:3702 "Arabidop... 1452 2.3e-207 4
TAIR|locus:2044697 - symbol:MEE27 "maternal effect embryo... 1694 3.7e-196 2
TAIR|locus:2064910 - symbol:AT2G38950 species:3702 "Arabi... 917 3.4e-113 2
ZFIN|ZDB-GENE-030131-5379 - symbol:kdm5ba "lysine (K)-spe... 710 8.2e-95 4
UNIPROTKB|B4E1Y0 - symbol:KDM5D "Lysine-specific demethyl... 687 8.9e-95 3
UNIPROTKB|F1NN75 - symbol:KDM5A "Uncharacterized protein"... 727 1.7e-94 4
FB|FBgn0031759 - symbol:lid "little imaginal discs" speci... 715 6.2e-92 3
UNIPROTKB|F1RUI7 - symbol:KDM5C "Lysine-specific demethyl... 694 1.3e-91 3
ZFIN|ZDB-GENE-030424-1 - symbol:kdm5bb "lysine (K)-specif... 709 1.5e-91 3
UNIPROTKB|K7GNM7 - symbol:KDM5C "Lysine-specific demethyl... 694 1.6e-91 3
MGI|MGI:99781 - symbol:Kdm5c "lysine (K)-specific demethy... 694 1.9e-91 3
UNIPROTKB|F1MYV2 - symbol:KDM5C "Uncharacterized protein"... 694 2.0e-91 3
UNIPROTKB|Q30DN6 - symbol:KDM5D "Lysine-specific demethyl... 702 2.2e-91 3
UNIPROTKB|E2R0S2 - symbol:KDM5C "Lysine-specific demethyl... 691 2.7e-91 3
RGD|1305429 - symbol:Kdm5a "lysine (K)-specific demethyla... 784 2.8e-91 2
UNIPROTKB|E9PSW7 - symbol:Jarid1a "Protein Jarid1a" speci... 784 2.8e-91 2
UNIPROTKB|B0QZ44 - symbol:KDM5C "Smcy homolog, X-linked (... 694 3.2e-91 3
UNIPROTKB|P41229 - symbol:KDM5C "Lysine-specific demethyl... 694 3.3e-91 3
UNIPROTKB|Q38JA7 - symbol:KDM5C "Lysine-specific demethyl... 691 3.3e-91 3
UNIPROTKB|E9PFH2 - symbol:KDM5D "Lysine-specific demethyl... 687 3.6e-91 3
UNIPROTKB|Q9BY66 - symbol:KDM5D "Lysine-specific demethyl... 687 5.0e-91 3
UNIPROTKB|Q5F3R2 - symbol:KDM5B "Lysine-specific demethyl... 718 6.0e-91 3
UNIPROTKB|A1YVX4 - symbol:KDM5C "Lysine-specific demethyl... 686 9.3e-91 3
MGI|MGI:99780 - symbol:Kdm5d "lysine (K)-specific demethy... 686 1.1e-90 3
UNIPROTKB|Q9UGL1 - symbol:KDM5B "Lysine-specific demethyl... 715 3.7e-90 3
MGI|MGI:1922855 - symbol:Kdm5b "lysine (K)-specific demet... 715 3.7e-90 3
RGD|1565602 - symbol:Kdm5b "lysine (K)-specific demethyla... 715 3.8e-90 3
ZFIN|ZDB-GENE-060810-94 - symbol:kdm5c "lysine (K)-specif... 679 1.1e-89 3
MGI|MGI:2136980 - symbol:Kdm5a "lysine (K)-specific demet... 788 3.9e-89 2
UNIPROTKB|F1Q4J4 - symbol:KDM5A "Uncharacterized protein"... 784 6.4e-89 2
UNIPROTKB|F1MQ59 - symbol:KDM5A "Uncharacterized protein"... 783 6.5e-89 2
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 710 7.8e-89 3
UNIPROTKB|E9PSM3 - symbol:Jarid1a "Protein Jarid1a" speci... 784 8.2e-89 2
UNIPROTKB|F5H1F7 - symbol:KDM5A "Lysine-specific demethyl... 779 1.8e-88 2
UNIPROTKB|P29375 - symbol:KDM5A "Lysine-specific demethyl... 779 2.2e-88 2
UNIPROTKB|F1NRC4 - symbol:KDM5B "Lysine-specific demethyl... 718 3.8e-88 3
UNIPROTKB|F1NUR9 - symbol:KDM5B "Lysine-specific demethyl... 718 4.1e-88 3
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 712 5.3e-83 4
UNIPROTKB|D4A3B4 - symbol:D4A3B4 "Uncharacterized protein... 711 5.9e-83 2
ASPGD|ASPL0000010243 - symbol:AN8211 species:162425 "Emer... 695 6.8e-82 3
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 715 2.6e-79 2
UNIPROTKB|F1PJS3 - symbol:KDM5B "Uncharacterized protein"... 715 5.6e-79 2
UNIPROTKB|G4N2P7 - symbol:MGG_04878 "Lid2 complex compone... 666 1.0e-78 3
WB|WBGene00004319 - symbol:rbr-2 species:6239 "Caenorhabd... 687 1.0e-78 2
UNIPROTKB|Q23541 - symbol:rbr-2 "Lysine-specific demethyl... 687 1.0e-78 2
UNIPROTKB|E7EV89 - symbol:KDM5A "Lysine-specific demethyl... 691 1.2e-77 2
UNIPROTKB|I3L8V3 - symbol:KDM5A "Uncharacterized protein"... 767 3.9e-76 1
TAIR|locus:2031290 - symbol:AT1G63490 species:3702 "Arabi... 743 3.8e-75 2
DICTYBASE|DDB_G0268778 - symbol:rbbB "putative Retinoblas... 612 4.9e-73 4
POMBASE|SPAC1002.05c - symbol:jmj2 "histone demethylase J... 560 6.8e-73 3
CGD|CAL0000662 - symbol:orf19.5651 species:5476 "Candida ... 577 3.0e-64 2
SGD|S000003880 - symbol:JHD2 "JmjC domain family histone ... 451 1.6e-46 2
UNIPROTKB|Q92833 - symbol:JARID2 "Protein Jumonji" specie... 383 1.2e-42 2
MGI|MGI:104813 - symbol:Jarid2 "jumonji, AT rich interact... 385 1.5e-42 2
UNIPROTKB|B2RXH2 - symbol:KDM4E "Lysine-specific demethyl... 389 1.5e-42 2
UNIPROTKB|F1RUJ7 - symbol:JARID2 "Uncharacterized protein... 384 1.9e-42 2
UNIPROTKB|F1P6D5 - symbol:JARID2 "Uncharacterized protein... 383 2.0e-42 2
UNIPROTKB|J9NWC2 - symbol:JARID2 "Uncharacterized protein... 383 2.0e-42 2
UNIPROTKB|F1MH56 - symbol:JARID2 "Uncharacterized protein... 381 5.4e-42 2
TAIR|locus:2146653 - symbol:ELF6 "EARLY FLOWERING 6" spec... 411 1.8e-41 3
TAIR|locus:504955644 - symbol:REF6 "relative of early flo... 420 2.1e-41 3
UNIPROTKB|F1NWZ0 - symbol:JARID2 "Protein Jumonji" specie... 374 9.9e-41 2
UNIPROTKB|Q5F363 - symbol:JARID2 "Protein Jumonji" specie... 374 1.0e-40 2
ZFIN|ZDB-GENE-061218-1 - symbol:jarid2a "jumonji, AT rich... 370 1.1e-40 2
ZFIN|ZDB-GENE-060503-246 - symbol:jarid2b "jumonji, AT ri... 381 3.2e-40 3
ZFIN|ZDB-GENE-030131-6279 - symbol:kdm4ab "lysine (K)-spe... 380 1.8e-38 3
ZFIN|ZDB-GENE-070705-160 - symbol:si:ch211-262l3.1 "si:ch... 380 1.8e-38 3
MGI|MGI:3606484 - symbol:Kdm4d "lysine (K)-specific demet... 371 5.6e-38 2
UNIPROTKB|Q6B0I6 - symbol:KDM4D "Lysine-specific demethyl... 370 1.2e-37 2
RGD|1591045 - symbol:Kdm4d "lysine (K)-specific demethyla... 366 6.6e-37 2
MGI|MGI:2446210 - symbol:Kdm4a "lysine (K)-specific demet... 378 3.0e-36 2
UNIPROTKB|E1BPL5 - symbol:KDM4A "Uncharacterized protein"... 378 3.0e-36 2
UNIPROTKB|Q5RD88 - symbol:KDM4A "Lysine-specific demethyl... 378 8.6e-36 3
UNIPROTKB|O75164 - symbol:KDM4A "Lysine-specific demethyl... 378 1.1e-35 3
UNIPROTKB|E1C6D5 - symbol:KDM4A "Uncharacterized protein"... 386 1.1e-35 3
UNIPROTKB|E2RFE0 - symbol:KDM4A "Uncharacterized protein"... 379 1.4e-35 3
FB|FBgn0036004 - symbol:Jarid2 "Jumonji, AT rich interact... 354 2.0e-35 2
FB|FBgn0053182 - symbol:Kdm4B "Histone demethylase 4B" sp... 363 2.2e-35 2
UNIPROTKB|E1BX38 - symbol:Gga.52669 "Uncharacterized prot... 380 3.7e-35 2
ZFIN|ZDB-GENE-120215-3 - symbol:si:ch211-215f22.3 "si:ch2... 369 4.4e-35 3
UNIPROTKB|E1BA41 - symbol:KDM4B "Uncharacterized protein"... 372 5.5e-35 2
ZFIN|ZDB-GENE-070209-38 - symbol:zgc:153957 "zgc:153957" ... 378 9.2e-35 3
MGI|MGI:2442355 - symbol:Kdm4b "lysine (K)-specific demet... 372 1.3e-34 2
UNIPROTKB|O94953 - symbol:KDM4B "Lysine-specific demethyl... 367 1.9e-34 2
UNIPROTKB|F5GX28 - symbol:KDM4B "Lysine-specific demethyl... 367 2.1e-34 2
UNIPROTKB|E2R243 - symbol:KDM4B "Uncharacterized protein"... 367 2.1e-34 2
UNIPROTKB|F1SMN9 - symbol:F1SMN9 "Uncharacterized protein... 372 5.1e-34 2
ZFIN|ZDB-GENE-060503-664 - symbol:kdm4b "lysine (K)-speci... 371 8.1e-34 3
RGD|1307528 - symbol:Kdm4c "lysine (K)-specific demethyla... 368 1.4e-33 2
MGI|MGI:1924054 - symbol:Kdm4c "lysine (K)-specific demet... 368 1.4e-33 2
UNIPROTKB|Q9H3R0 - symbol:KDM4C "Lysine-specific demethyl... 368 8.1e-33 3
UNIPROTKB|F1PHR7 - symbol:KDM4C "Uncharacterized protein"... 368 1.3e-32 3
FB|FBgn0033233 - symbol:Kdm4A "Histone demethylase 4A" sp... 340 1.6e-32 2
SGD|S000000971 - symbol:RPH1 "JmjC domain-containing hist... 328 2.2e-32 3
RGD|1306378 - symbol:Kdm4a "lysine (K)-specific demethyla... 378 2.9e-31 1
UNIPROTKB|F1N9S1 - symbol:F1N9S1 "Uncharacterized protein... 366 6.2e-30 1
UNIPROTKB|Q9U297 - symbol:jmjd-2 "Lysine-specific demethy... 321 3.8e-29 2
CGD|CAL0004229 - symbol:orf19.2743 species:5476 "Candida ... 317 9.1e-29 3
WARNING: Descriptions of 20 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2128659 [details] [associations]
symbol:JMJ14 "JUMONJI 14" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
[GO:0009910 "negative regulation of flower development"
evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005654 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0009910 GO:GO:0048573
EMBL:AL161553 EMBL:AL080253 GO:GO:0010216 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 EMBL:BT002486 EMBL:BT010548 IPI:IPI00516310
IPI:IPI00656704 PIR:T10582 RefSeq:NP_001031681.1 RefSeq:NP_193773.2
UniGene:At.43482 ProteinModelPortal:Q8GUI6 SMR:Q8GUI6 IntAct:Q8GUI6
PaxDb:Q8GUI6 PRIDE:Q8GUI6 EnsemblPlants:AT4G20400.1 GeneID:827788
KEGG:ath:AT4G20400 TAIR:At4g20400 HOGENOM:HOG000241335
InParanoid:Q8GUI6 KO:K11446 OMA:VQRSGEF PhylomeDB:Q8GUI6
ProtClustDB:CLSN2679960 Genevestigator:Q8GUI6 Uniprot:Q8GUI6
Length = 954
Score = 1931 (684.8 bits), Expect = 3.6e-222, Sum P(2) = 3.6e-222
Identities = 375/656 (57%), Positives = 453/656 (69%)
Query: 14 EISARWDPAEACRPIIDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPP 73
+I+ARW+P+EACRP++D+AP+FYPT E+F+D LGYI K+RSKAES+GICRIVPP +W PP
Sbjct: 38 KITARWNPSEACRPLVDDAPIFYPTNEDFDDPLGYIEKLRSKAESYGICRIVPPVAWRPP 97
Query: 74 CPLKAKNIWENAKFSTRIQQIDLLQNREPMXXXXXXXXXXXXXXXXXXXXXXXXXX---X 130
CPLK K IWEN+KF TRIQ IDLLQNREP+
Sbjct: 98 CPLKEKKIWENSKFPTRIQFIDLLQNREPIKKSTKTKKRKRRRISKIGYTRRKRDSGCDT 157
Query: 131 XXXXXXXXDEKFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSV 190
+ KFGFQ+GPD TLE FQKY + FKECYF S++ S E+K+ +P V
Sbjct: 158 ASSGSSDSEGKFGFQTGPDFTLEEFQKYDEYFKECYF---QSEDHPGSKASENKKFKPKV 214
Query: 191 VDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNL 250
D+EGEYWRI+E+ TDEVEVYYGADLET F SGFPK S+ DQY+ GWNLNNL
Sbjct: 215 KDLEGEYWRIVEQATDEVEVYYGADLETKKFGSGFPKYKPGYPISEADQYSQCGWNLNNL 274
Query: 251 PRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPG 310
RLPGSVLAFE DISGV+VPWLYVGMCFS+FCWHVEDHHLYS+NYLH GDPK+WYG+PG
Sbjct: 275 SRLPGSVLAFESCDISGVIVPWLYVGMCFSTFCWHVEDHHLYSMNYLHTGDPKVWYGIPG 334
Query: 311 SHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPR 370
+HA + E M+K LPDLFEEQPDLLH+LVTQLSP +LK EGVPVY VQ SGEF+LTFP+
Sbjct: 335 NHAESFENVMKKRLPDLFEEQPDLLHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPK 394
Query: 371 AYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKAL 430
AYHSGFNCGFNCAEAVNVAPVDWL HGQ AVE YS+Q RK+SLSHDKLL G+ A L
Sbjct: 395 AYHSGFNCGFNCAEAVNVAPVDWLVHGQNAVEGYSKQRRKSSLSHDKLLLGAAMEATYCL 454
Query: 431 WELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLK 490
WELS+ +KKTP +WK C +DG+LTKA+K RVQM++E L L F L+KME DFD K
Sbjct: 455 WELSLSKKKTPVIARWKRVCSEDGLLTKAVKKRVQMEEERLNHLQDGFSLRKMEGDFDNK 514
Query: 491 TERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEA 550
ERECF CFYDLH+SA+ CKCSP+RFACL HA CSCE R++++R++ DEL LV A
Sbjct: 515 RERECFLCFYDLHMSASSCKCSPNRFACLIHAKDLCSCESKDRYILIRHTLDELWALVRA 574
Query: 551 LEGGLDALKELASKNFKWADCSDTDGGLVKMDME-SEVFPMDCCEQKESSSSSPRVENIV 609
LEG LDA+ ASK C D E + + C + + SS R +N +
Sbjct: 575 LEGDLDAIDLWASK------CRDQYPSQHPRAREYAYLKSAPCIKSRGSSKVQQREQNNL 628
Query: 610 EGNGPCCSRSHVSSEVVQSEPQRGTSGLSA-SHVSVNSHNEG-NDETQVMNKKAKV 663
+ S++ VQ + Q G S ++ H S +H G D++ V + K V
Sbjct: 629 QLVSERLQSDLTSNKEVQLK-QDGDSDVNRHGHESERNHVHGITDKSAVTDVKLGV 683
Score = 237 (88.5 bits), Expect = 3.6e-222, Sum P(2) = 3.6e-222
Identities = 59/138 (42%), Positives = 80/138 (57%)
Query: 730 SSNSHKDPNKDQPSCSRVIEGTCS-FDVKKLFGVDLSLPHQQSKLPLVDFLK-TDTINGS 787
S +H D+ + + V G FD KK+ V+ PH S + + K D G
Sbjct: 662 SERNHVHGITDKSAVTDVKLGVGGKFDEKKI-SVESQNPHSVSDVGCSELAKKVDGCLGG 720
Query: 788 NVRTSVTDQRFQKKLETCVEPINFGCVMCGKLWCSKQAIFPKGFRSRVNFYSVLNPEKVC 847
+ + T+ +L VE ++ G ++ KLWCSKQAI+PKGF+SRV F SVL+P +
Sbjct: 721 KDQNAATN-----RLSLSVELLSSGSLVVKKLWCSKQAIYPKGFKSRVKFLSVLDPTNLT 775
Query: 848 NYISEVLDAGLLGPLFKV 865
NYISEVLDAGLLGPLF+V
Sbjct: 776 NYISEVLDAGLLGPLFRV 793
>TAIR|locus:2196979 [details] [associations]
symbol:JMJ18 "Jumonji domain-containing protein 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 GO:GO:0048573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0032453 KO:K11446
IPI:IPI00545873 RefSeq:NP_001185118.1 RefSeq:NP_174367.6
UniGene:At.27326 UniGene:At.74914 ProteinModelPortal:F4I6G4
SMR:F4I6G4 PRIDE:F4I6G4 EnsemblPlants:AT1G30810.1
EnsemblPlants:AT1G30810.2 GeneID:839963 KEGG:ath:AT1G30810
OMA:NCERECF Uniprot:F4I6G4
Length = 819
Score = 1858 (659.1 bits), Expect = 2.1e-215, Sum P(2) = 2.1e-215
Identities = 356/568 (62%), Positives = 418/568 (73%)
Query: 1 MEQSKLAAESHIKEISARWDPAEACRPIIDEAPVFYPTVEEFEDTLGYIAKIRSKAESFG 60
MEQ ++ H +++ ARW P EA RPII++APVF P++EEF D L YI KIR AE +G
Sbjct: 31 MEQP--SSPRH-RKVVARWLPDEAQRPIINDAPVFTPSLEEFVDPLAYIEKIRPLAEPYG 87
Query: 61 ICRIVPPSSWTPPCPLKAKNIWENAKFSTRIQQIDLLQNREPMXXXXXXXXXXXXXXXXX 120
ICRI+PPS+W PPC LK K+IWE KF TRIQ +DLLQNREPM
Sbjct: 88 ICRIIPPSTWKPPCRLKEKSIWEQTKFPTRIQTVDLLQNREPMKKKPKSRKRKRRRNSRM 147
Query: 121 XXXXXXXXXXXXXXXXX--XDEKFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKS 178
+EKFGF SG D TL+ F+KYA +FK+ YF DS D+
Sbjct: 148 GSSKRRSGSSPAESTSSPEAEEKFGFNSGSDFTLDEFEKYALHFKDSYFEKKDSGGDIV- 206
Query: 179 DGFEHKRLEPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLD 238
+ PSV DIEGEYWRI+E+PTDEVEVYYGADLE G SGF K + T SD++
Sbjct: 207 ------KWTPSVDDIEGEYWRIVEQPTDEVEVYYGADLENGVLGSGFYKRAEKFTGSDME 260
Query: 239 QYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLH 298
QY +SGWNLNNLPRLPGSVL+FE DISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNY H
Sbjct: 261 QYTLSGWNLNNLPRLPGSVLSFEDCDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYHH 320
Query: 299 WGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVV 358
+G+PK+WYGVPGS+A+ LEKAMRKHLPDLFEEQPDLLH LVTQ SPS+LK EGV Y VV
Sbjct: 321 FGEPKVWYGVPGSNATALEKAMRKHLPDLFEEQPDLLHGLVTQFSPSILKDEGVQAYRVV 380
Query: 359 QHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKL 418
Q+SGE+VLTFPRAYH+GFNCGFNCAEAVNVAPVDWLAHGQ AVELYS++ RKTSLSHDKL
Sbjct: 381 QNSGEYVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLAHGQNAVELYSKETRKTSLSHDKL 440
Query: 419 LFGSVQAAIKALWELSVLQ-KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLP-S 476
L G+ A+KALWELS + K+ N +WK CGK+G LT AI+ R+QM++ + L
Sbjct: 441 LLGAAYEAVKALWELSASEGKENTTNLRWKSFCGKNGTLTNAIQARLQMEEGRITALGRD 500
Query: 477 YFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVI 536
L+KME DFD ERECFSCFYDLHLSA+GCKCSP+ +ACLKHA+ CSC++ F++
Sbjct: 501 SSSLKKMEKDFDSNCERECFSCFYDLHLSASGCKCSPEEYACLKHADDLCSCDVKDGFIL 560
Query: 537 LRYSTDELNTLVEALEGGLDALKELASK 564
LRY+ DEL++LV ALEG D LK ASK
Sbjct: 561 LRYTMDELSSLVRALEGESDDLKIWASK 588
Score = 246 (91.7 bits), Expect = 2.1e-215, Sum P(2) = 2.1e-215
Identities = 60/149 (40%), Positives = 83/149 (55%)
Query: 718 EQDTMQVRSDCNSSNSHKDPNKDQPSCSRVIEGTCSFDVKKL-FGVDLSLPHQQSKLPLV 776
E D +++ + H D +DQ S VI +DL + +Q+
Sbjct: 578 ESDDLKIWASKVLGIEHSD--EDQTKTSSVISEEKKLKEGSFDLNIDLEMDYQE------ 629
Query: 777 DFLKTDTINGSNVRTSVTDQRFQKKLETCVEPINFGCVMCGKLWCSKQAIFPKGFRSRVN 836
D + + +G + S + L VEPIN G ++ GKLWC+K AIFPKGFRSRV
Sbjct: 630 DVKEEASTSGGELTAS-------ENLGVSVEPINLGFLIFGKLWCNKYAIFPKGFRSRVK 682
Query: 837 FYSVLNPEKVCNYISEVLDAGLLGPLFKV 865
FY+VL+P ++ NYISEVLDAGL+GPLF+V
Sbjct: 683 FYNVLDPTRMSNYISEVLDAGLMGPLFRV 711
Score = 52 (23.4 bits), Expect = 8.2e-198, Sum P(3) = 8.2e-198
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 621 VSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQ---VMNKKAKVKHEVCIDLNMDVIP 677
+SS V E + + AS V H++ D+T+ V++++ K+K E DLN+D+
Sbjct: 568 LSSLVRALEGESDDLKIWASKVLGIEHSD-EDQTKTSSVISEEKKLK-EGSFDLNIDLEM 625
Query: 678 DGNES-KLLLSDSHGK-EAIENL 698
D E K S S G+ A ENL
Sbjct: 626 DYQEDVKEEASTSGGELTASENL 648
Score = 44 (20.5 bits), Expect = 8.2e-198, Sum P(3) = 8.2e-198
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 733 SHKDPNKDQPSCSRVIEGTCSFDVKK--LFGVDL 764
+HK+ S I CS + K LFGVDL
Sbjct: 786 NHKNQTSSD-SKDHFISSNCSASLTKGKLFGVDL 818
>TAIR|locus:2025635 [details] [associations]
symbol:PKDM7D species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045492
"xylan biosynthetic process" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026 KO:K11446 EMBL:AB493442
IPI:IPI00545403 RefSeq:NP_001184940.1 RefSeq:NP_172338.4
UniGene:At.26858 ProteinModelPortal:C0SUT9 PaxDb:C0SUT9
PRIDE:C0SUT9 EnsemblPlants:AT1G08620.1 EnsemblPlants:AT1G08620.2
GeneID:837384 KEGG:ath:AT1G08620 TAIR:At1g08620 OMA:GMNELET
PhylomeDB:C0SUT9 ProtClustDB:CLSN2722602 Genevestigator:C0SUT9
Uniprot:C0SUT9
Length = 1209
Score = 1452 (516.2 bits), Expect = 2.3e-207, Sum P(4) = 2.3e-207
Identities = 269/451 (59%), Positives = 331/451 (73%)
Query: 140 EKFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKED--VKSDGFEHKRLEPSVVDIEGEY 197
E FGF+ GP TL+ FQKYA FK YF +++ D K D EP++ D+EGEY
Sbjct: 260 ETFGFEPGPGFTLKDFQKYADEFKAQYFKKSETSTDDKCKVDN-SIDCWEPALEDVEGEY 318
Query: 198 WRIIERPTDEVEVYYGADLETGAFASGFPK-ASSLGTESDLDQYAMSGWNLNNLPRLPGS 256
WRI+++ T+E+EV YGADLETG F SGFPK +SS S D+YA SGWNLNN PRLPGS
Sbjct: 319 WRIVDKATEEIEVLYGADLETGVFGSGFPKISSSHNASSSEDKYAKSGWNLNNFPRLPGS 378
Query: 257 VLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTL 316
+L +EGSDISGVLVPWLY+GMCFSSFCWHVEDHHLYSLNY+HWG PK+WYGV G A L
Sbjct: 379 LLKYEGSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVGGKDAVKL 438
Query: 317 EKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGF 376
E+AMRKHLPDLFEEQPDLLH+LVTQLSPS LK GVPV+ VQH+GEFVLTFPRAYH+GF
Sbjct: 439 EEAMRKHLPDLFEEQPDLLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGF 498
Query: 377 NCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVL 436
N GFNCAEAVNVAPVDWL HGQ A+ELY +Q RKTS+SHDKLL G+ + +KA WEL++L
Sbjct: 499 NSGFNCAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKLLLGAAREVVKADWELNLL 558
Query: 437 QKKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECF 496
+K T N +WK KDG+L K +K R+ M++ + L + KM +FD EREC
Sbjct: 559 RKNTVDNLRWKAFSAKDGILAKTLKARIDMERTRREFLCNSSLALKMHSNFDATNERECC 618
Query: 497 SCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLD 556
CF+DLHLSAAGC+CSP++++CL H CSC ++ + RY DELN LVEA+EG L
Sbjct: 619 ICFFDLHLSAAGCRCSPEKYSCLTHVKELCSCPWVTKYFLFRYDIDELNVLVEAVEGKLS 678
Query: 557 ALKELASKNFKWADCSDTDGGLVKMDMESEV 587
++ A ++ A +D G +++D E +V
Sbjct: 679 SVYRWARQDLGLALSTDVSGSKMEIDEEGKV 709
Score = 346 (126.9 bits), Expect = 2.3e-207, Sum P(4) = 2.3e-207
Identities = 59/91 (64%), Positives = 75/91 (82%)
Query: 13 KEISARWDPAEACRPIIDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTP 72
++++ARW P EA RP +++APVFYP+ EEFEDTL YIAKIR +AE +GICRIVPP SW P
Sbjct: 127 QKVTARWHPDEARRPDLEDAPVFYPSEEEFEDTLNYIAKIRPEAEKYGICRIVPPPSWKP 186
Query: 73 PCPLKAKNIWENAKFSTRIQQIDLLQNREPM 103
PCPLK K +WE +KF+TR+Q++D LQNR M
Sbjct: 187 PCPLKEKQVWEGSKFTTRVQRVDKLQNRSSM 217
Score = 218 (81.8 bits), Expect = 2.3e-207, Sum P(4) = 2.3e-207
Identities = 37/66 (56%), Positives = 52/66 (78%)
Query: 800 KKLETCVEPINFGCVMCGKLWCSKQAIFPKGFRSRVNFYSVLNPEKVCNYISEVLDAGLL 859
+++ VEP+++GCV+ GK WCS++AIFPKGFRSRV + ++L+P +C YISE+LDAG
Sbjct: 976 RRINCNVEPLSYGCVLSGKSWCSRRAIFPKGFRSRVKYINILDPTNMCFYISEILDAGRN 1035
Query: 860 GPLFKV 865
PLF V
Sbjct: 1036 SPLFMV 1041
Score = 41 (19.5 bits), Expect = 2.3e-207, Sum P(4) = 2.3e-207
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 610 EGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQVMNKKAKVKH 665
EG+ +R+ +S + R S SH VN+ G + + N+ A H
Sbjct: 866 EGDSLRDTRNTISLPTNDQKTMRRDVPSSTSHAEVNAEATGLTQ-DICNRMATNSH 920
>TAIR|locus:2044697 [details] [associations]
symbol:MEE27 "maternal effect embryo arrest 27"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009555
GO:GO:0003700 GO:GO:0009793 EMBL:AC004238 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
HOGENOM:HOG000241335 KO:K11446 IPI:IPI00542103 PIR:T00470
RefSeq:NP_181034.1 UniGene:At.53035 ProteinModelPortal:O64752
SMR:O64752 EnsemblPlants:AT2G34880.1 GeneID:818053
KEGG:ath:AT2G34880 TAIR:At2g34880 InParanoid:O64752 OMA:DICSCEG
PhylomeDB:O64752 ProtClustDB:CLSN2683666 ArrayExpress:O64752
Genevestigator:O64752 Uniprot:O64752
Length = 806
Score = 1694 (601.4 bits), Expect = 3.7e-196, Sum P(2) = 3.7e-196
Identities = 339/599 (56%), Positives = 415/599 (69%)
Query: 14 EISARWDPAEACRPIIDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPP 73
++ ARWDPA RP I EAPVF+PT EEFEDTL YI KIR AESFGICRIVPPS+W+PP
Sbjct: 43 KVLARWDPANEKRPDIGEAPVFHPTSEEFEDTLAYIEKIRPLAESFGICRIVPPSNWSPP 102
Query: 74 CPLKAKNIWENAKFSTRIQQIDLLQNREPMXXXXXXXXXXXXXXXXXXXX----XXXXXX 129
C LK +IW+N F TR+Q +DLLQNR P+
Sbjct: 103 CRLKGDSIWKNKNFPTRVQFVDLLQNRGPVKKKTPKGRKRKRGKYSRTVAPKKRNGSVSK 162
Query: 130 XXXXXXXXXDEKFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPS 189
+E FGF+SGP+ TLE F+KYAQ+FK+ YF + K++V G +PS
Sbjct: 163 SVSTPKATEEENFGFESGPEFTLEKFEKYAQDFKDSYF---ERKDNV---G------DPS 210
Query: 190 VVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTE-SDLDQYAMSGWNLN 248
V +IEGEYWRIIE+ T+EV+V YG DLE SGF K + T +D+D+Y SGWNLN
Sbjct: 211 VEEIEGEYWRIIEKETNEVKVLYGTDLENPILGSGFSKGVKIPTRRNDMDKYISSGWNLN 270
Query: 249 NLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGV 308
NL RL GS+L+FE +ISGV VPWLYVGMCFS+FCWHVED+HLYSLNY H+G+PK+WYGV
Sbjct: 271 NLARLQGSLLSFEDCEISGVQVPWLYVGMCFSTFCWHVEDNHLYSLNYHHFGEPKVWYGV 330
Query: 309 PGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTF 368
PGSHA+ LEKAMRKHLPDLF+EQPDLLHELVTQ SP++LK EGVPVY VQ++GE+VLTF
Sbjct: 331 PGSHATGLEKAMRKHLPDLFDEQPDLLHELVTQFSPTILKNEGVPVYRAVQNAGEYVLTF 390
Query: 369 PRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIK 428
PRAYHSGFNCGFNCAEAVNVAPVDWLAHGQ AVE+YS++ RKTSLSHDK+L G AA +
Sbjct: 391 PRAYHSGFNCGFNCAEAVNVAPVDWLAHGQNAVEIYSQETRKTSLSHDKILLG---AAFE 447
Query: 429 ALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFD 488
A+ LS + WK CGKDG++TKAI+ R++M+++ ++ L + F L KM+ DFD
Sbjct: 448 AVKSLSAHGEDNTKRFSWKRFCGKDGIITKAIEARLRMEEKRIEALGNGFSLVKMDKDFD 507
Query: 489 LKTERECFSCFYDLHLSAAGCK-CSP-DRFACLKHANIFCSCEIDHRFVILRYSTDELNT 546
EREC SCF DLHLSA GCK CS + + C KH CSCE RF+ LRY+ DEL++
Sbjct: 508 SNCERECISCFSDLHLSATGCKNCSSLEEYGCTKHD--ICSCEGKDRFIFLRYTIDELSS 565
Query: 547 LVEALEGGLDALKELASKNFKWADCSDTDGG-----LVK-MDMESEVFPM--DCCEQKE 597
LV ALEG D LK SK + CS+T G +VK ++ E F + +C + E
Sbjct: 566 LVRALEGESDDLKAWLSKVME--GCSETQKGESSGIIVKEKQVQEECFDLNGECNKSSE 622
Score = 228 (85.3 bits), Expect = 3.7e-196, Sum P(2) = 3.7e-196
Identities = 40/60 (66%), Positives = 51/60 (85%)
Query: 806 VEPINFGCVMCGKLWCSKQAIFPKGFRSRVNFYSVLNPEKVCNYISEVLDAGLLGPLFKV 865
VEPIN G ++ GKLWC+K AIFPKGF+SRV FY+V +P ++ Y+SE++DAGLLGPLFKV
Sbjct: 637 VEPINLGFLVVGKLWCNKHAIFPKGFKSRVKFYNVQDPMRISYYVSEIVDAGLLGPLFKV 696
Score = 41 (19.5 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 746 RVIEGTCSFDVKKLFGVDLSLP 767
R+IE + +VK L+G DL P
Sbjct: 220 RIIEKETN-EVKVLYGTDLENP 240
Score = 38 (18.4 bits), Expect = 4.5e-176, Sum P(2) = 4.5e-176
Identities = 24/117 (20%), Positives = 48/117 (41%)
Query: 649 EGNDETQVMNKKAKVKHEVCIDLNMDVIPDGNESKLLLSDSHGKEAIENLKAHLSACYQE 708
E DE+ K V + + +++ N+ + D H E+I+ LK ++
Sbjct: 700 ESQDESFSYASPQKCWEMVLLRVKEEIMRRSNQKQ----DVHMLESIDGLKMF---GFRS 752
Query: 709 KVLCSGTVKEQDTMQVRSDCNSSNSHKDPNKDQPSCSRVIEGTCSFDVKKLFGVDLS 765
+ T + D + + + + KD + + C + + S +LFGVDL+
Sbjct: 753 PFIVQAT-EALDPNHGQVEYWNHKNEKD-SLEMKDCF-MSNSSQSLSKARLFGVDLN 806
>TAIR|locus:2064910 [details] [associations]
symbol:AT2G38950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003700 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 HOGENOM:HOG000241335
KO:K11446 EMBL:AY127026 EMBL:BT001088 IPI:IPI00539605
RefSeq:NP_181429.2 UniGene:At.37227 ProteinModelPortal:Q8L7T6
SMR:Q8L7T6 PRIDE:Q8L7T6 EnsemblPlants:AT2G38950.1 GeneID:818480
KEGG:ath:AT2G38950 TAIR:At2g38950 eggNOG:NOG308887
InParanoid:Q8L7T6 OMA:FDCGFNC PhylomeDB:Q8L7T6
ProtClustDB:CLSN2918209 Genevestigator:Q8L7T6 Uniprot:Q8L7T6
Length = 708
Score = 917 (327.9 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
Identities = 183/425 (43%), Positives = 256/425 (60%)
Query: 145 QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYWRIIERP 204
+ GP TL+ F+ +A +K+ +FGM D ++ K E V DIE EY +I+E P
Sbjct: 201 ERGPGYTLKSFKNFADTYKKSHFGMKDEVLGSENSSPSLKPNELIVADIEKEYRQIVESP 260
Query: 205 TDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSD 264
E+ V YG DL+T F SGFP L S+ +Y+ SGWNLN+ +LPGS+L+ E D
Sbjct: 261 LIEIGVLYGNDLDTATFGSGFP----LSAPSESSKYS-SGWNLNSTAKLPGSLLSLE--D 313
Query: 265 ISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHL 324
V VP L VGMC SS W E LYSL YLH G P++WY V G H S + AM+ +
Sbjct: 314 CESVCVPRLSVGMCLSSQFWKSEKERLYSLCYLHVGAPRVWYSVAGCHRSKFKAAMKSFI 373
Query: 325 PDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAE 384
++ EQP H V +SP L EG+PV VQH G++V+ FP +Y+S F+CGFNC E
Sbjct: 374 LEMSGEQPKKSHNPVMMMSPYQLSVEGIPVTRCVQHPGQYVIIFPGSYYSAFDCGFNCLE 433
Query: 385 AVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNR 444
N AP+DWL HG AV++ E + + +S+DKLLF + + A+K L E + +K T
Sbjct: 434 KANFAPLDWLPHGDIAVQVNQEMSKTSLISYDKLLFSAAREAVKCLKEYGLSKKNTACYT 493
Query: 445 KWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHL 504
+W D+CG DG+ + IK+R++++K + L S + Q+M+ +D +REC C DL+L
Sbjct: 494 RWNDSCGTDGLFSNIIKSRIKLEKNRREFLISSLESQRMDKSYDAVNKRECCVCLGDLYL 553
Query: 505 SAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASK 564
SA C CS +R++CL H C+C D + + RY+ DELN LVEALEG K+L+S
Sbjct: 554 SAVNCSCSANRYSCLNHMRKLCACPCDRKSFLYRYTMDELNLLVEALEG-----KKLSSM 608
Query: 565 NFKWA 569
F+WA
Sbjct: 609 -FRWA 612
Score = 220 (82.5 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
Identities = 39/75 (52%), Positives = 53/75 (70%)
Query: 28 IIDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKF 87
+++EAPVF PT EEF DTL YI+ +R +AE +GIC +VPP SW PPC LK K IWE + F
Sbjct: 104 VLEEAPVFNPTEEEFRDTLSYISSLRDRAEPYGICCVVPPPSWKPPCLLKEKQIWEASTF 163
Query: 88 STRIQQIDL-LQNRE 101
++Q + +NR+
Sbjct: 164 FPQVQLFGIQTENRK 178
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 710 (255.0 bits), Expect = 8.2e-95, Sum P(4) = 8.2e-95
Identities = 140/279 (50%), Positives = 177/279 (63%)
Query: 142 FGFQSGP-DLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYWRI 200
FGF+ P D TL F A +FK YF M H + P+ + +E E+WR+
Sbjct: 336 FGFEQAPRDYTLRTFGDMADSFKSDYFNMP-----------VH--MVPTEL-VEKEFWRL 381
Query: 201 IERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSVLA 259
+ ++V V YGAD+ + F SGFP K + + + Y SGWNLNN+P L SVL
Sbjct: 382 VSTIEEDVTVEYGADIASKDFGSGFPVKNGTFKVSPEEEGYLTSGWNLNNMPVLEASVLT 441
Query: 260 FEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKA 319
+DI G+ +PWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYG PG A LE
Sbjct: 442 HVTADICGMKLPWLYVGMCFSSFCWHIEDHWSYSVNYLHWGEPKTWYGAPGYAAEQLEDV 501
Query: 320 MRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCG 379
M+ P+LFE QPDLLH+LVT ++P++L GVP+Y Q +GEFV+TFPRAYHSGFN G
Sbjct: 502 MKGLAPELFESQPDLLHQLVTIMNPNLLMEHGVPIYRTNQCAGEFVITFPRAYHSGFNQG 561
Query: 380 FNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKL 418
FN AEAVN DWL G+Q VE Y +R SHD++
Sbjct: 562 FNFAEAVNFCTADWLPLGRQCVEHYRSLYRYCVFSHDEM 600
Score = 143 (55.4 bits), Expect = 8.2e-95, Sum P(4) = 8.2e-95
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 458 KAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDL--KTERECFSCFYDLHLSAAGCKCSPDR 515
K + +Q +K +K ++D+D+ ER+C C +LSA C CSP++
Sbjct: 621 KDMNAMIQEEKILREKAYKLGMWHSQQVDYDILPDEERQCAKCRTTCYLSAITCPCSPEQ 680
Query: 516 FACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCSDTD 575
CL H CSC + + +Y+ EL T +AL ++ + ASK K +D D
Sbjct: 681 VVCLHHTQDLCSCPARNYTLNYKYTLAELKTFFQALTARAESYDDWASKVNKILK-ADQD 739
Query: 576 GGLVKMDME 584
K D+E
Sbjct: 740 N---KSDLE 745
Score = 141 (54.7 bits), Expect = 8.2e-95, Sum P(4) = 8.2e-95
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D G+I KIR AE+ GIC+I PP W PP A ++ + F+ R
Sbjct: 7 ECPVFEPSWEEFADPFGFINKIRPIAENTGICKIRPPPGWQPPF---ACDV-DRLHFTPR 62
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 63 IQRLNELE 70
Score = 38 (18.4 bits), Expect = 4.3e-82, Sum P(3) = 4.3e-82
Identities = 29/126 (23%), Positives = 48/126 (38%)
Query: 543 ELNTLVEALEGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQKESSSSS 602
E T +E+L + A KE A+K F + S + + + P CE S S
Sbjct: 1022 EALTRLESLISEVQAWKESAAKTFLLRNSS--------LSLLEVLCPR--CETGSQKSKS 1071
Query: 603 PRVENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNS--HNEGNDETQVMNKK 660
+ + EG PC + E TS +AS ++ S H + D ++
Sbjct: 1072 KKAK---EGLVPCKKADVKLDSLFDVEKVLSTSKDTASAMATLSDVHQKELDSLSMLRTS 1128
Query: 661 AKVKHE 666
+ K +
Sbjct: 1129 NESKFQ 1134
Score = 37 (18.1 bits), Expect = 8.2e-95, Sum P(4) = 8.2e-95
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 682 SKLLLSDSHGKEAIENLKAHLSACYQEKVLCSGTVKEQDTMQV 724
+K+L +D K +E L+ L+ EK + T D QV
Sbjct: 731 NKILKADQDNKSDLEELRCLLAEA--EKKMYPETDLLNDMRQV 771
>UNIPROTKB|B4E1Y0 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 UniGene:Hs.80358 HGNC:HGNC:11115 ChiTaRS:KDM5D
HOVERGEN:HBG068574 EMBL:AK304027 IPI:IPI01013623 SMR:B4E1Y0
STRING:B4E1Y0 Ensembl:ENST00000535647 UCSC:uc004fuh.2
Uniprot:B4E1Y0
Length = 888
Score = 687 (246.9 bits), Expect = 8.9e-95, Sum P(3) = 8.9e-95
Identities = 137/282 (48%), Positives = 182/282 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + +L+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 371 EAFGFEQATQEYSLQSFGEMADSFKSDYFNMP-----------VH--MVPTEL-VEKEFW 416
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLD-QYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP ++S S + +YA SGWNLN +P L SV
Sbjct: 417 RLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLDQSV 476
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 477 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE 536
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M+ P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 537 EVMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 596
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
G+N AEAVN DWL G+Q +E Y R SH++L+
Sbjct: 597 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 638
Score = 163 (62.4 bits), Expect = 8.9e-95, Sum P(3) = 8.9e-95
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF+D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
+Q+++ L+
Sbjct: 69 VQRLNELE 76
Score = 126 (49.4 bits), Expect = 8.9e-95, Sum P(3) = 8.9e-95
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C PD CL H N C C +++ RY+ DEL T++ L
Sbjct: 694 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTMLHKL 753
Query: 552 EGGLDALKELASK 564
+ ++ A+K
Sbjct: 754 KIRAESFDTWANK 766
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 727 (261.0 bits), Expect = 1.7e-94, Sum P(4) = 1.7e-94
Identities = 146/283 (51%), Positives = 184/283 (65%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A NFK YF M H + P+ + +E E+W
Sbjct: 353 EAFGFEQAVREYTLQSFGEMADNFKSDYFNMP-----------VH--MVPTEL-VEKEFW 398
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP K + + YA+SGWNLNN+P L SV
Sbjct: 399 RLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKLMPEEEDYALSGWNLNNMPILEQSV 458
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA +DISG+ VPWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 459 LAHINADISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLE 518
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
M++ P+LFE QPDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 519 DVMKELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 578
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLF 420
G+N AEAVN DWL G+Q V Y R SH++L+F
Sbjct: 579 QGYNFAEAVNFCTADWLPIGRQCVSHYRRLGRHCVFSHEELIF 621
Score = 152 (58.6 bits), Expect = 1.7e-94, Sum P(4) = 1.7e-94
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D LG+I +IR AE GIC+I PP W PP + ++ +F+ R
Sbjct: 22 ECPVFEPSWEEFSDPLGFIGRIRGLAEKTGICKIRPPKDWQPPFACEVQSF----RFTPR 77
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 78 IQRLNELE 85
Score = 116 (45.9 bits), Expect = 1.7e-94, Sum P(4) = 1.7e-94
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLV 548
ER+C +C LSA C C+P+R CL H + C C + ++ + RY ++L +L+
Sbjct: 676 ERQCTACRTTCFLSALTCSCNPERLVCLYHPSDLCPCPMQNKCLRYRYPLEDLPSLL 732
Score = 52 (23.4 bits), Expect = 4.2e-86, Sum P(3) = 4.2e-86
Identities = 26/90 (28%), Positives = 40/90 (44%)
Query: 405 SEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRV 464
SE+ RK L + FG ++ K EL L+K P +K K K L K K
Sbjct: 1506 SERKRKRKLERAEQFFGDMKQKSK---ELKKLEK--PKKKKLKLTMDKTKELNKLAKKLA 1560
Query: 465 QMKKEGLQKLPSYFKLQKMEIDFDLKTERE 494
K+E +K + K+E+ + TE++
Sbjct: 1561 --KEEERKKKREKAVVAKVELAKE-STEKK 1587
Score = 39 (18.8 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 158 YAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDI 193
Y+ K C G + ++ + + LEP V+++
Sbjct: 1406 YSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLEL 1441
Score = 38 (18.4 bits), Expect = 1.7e-94, Sum P(4) = 1.7e-94
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 655 QVMNKKAKVK--HEVCIDLNMDVIPDGNESKLLLSDSHG 691
QV N V+ HE + MD +PD ++ + L+ G
Sbjct: 849 QVKNLLDDVEEFHERAQEAMMDEVPDSSKLQELIDMGSG 887
>FB|FBgn0031759 [details] [associations]
symbol:lid "little imaginal discs" species:7227 "Drosophila
melanogaster" [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IMP] [GO:0043992
"histone acetyltransferase activity (H3-K9 specific)" evidence=IMP]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0043970 "histone H3-K9 acetylation" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0007275 GO:GO:0045893 EMBL:AE014134
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 GO:GO:0045475 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0070822 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 OMA:TEMVERE
EMBL:AY095051 RefSeq:NP_001245908.1 RefSeq:NP_001245909.1
RefSeq:NP_001245910.1 RefSeq:NP_523486.1 RefSeq:NP_723140.1
UniGene:Dm.2779 PDB:2LM1 PDBsum:2LM1 ProteinModelPortal:Q9VMJ7
SMR:Q9VMJ7 DIP:DIP-29330N IntAct:Q9VMJ7 MINT:MINT-1672742
STRING:Q9VMJ7 PaxDb:Q9VMJ7 PRIDE:Q9VMJ7 EnsemblMetazoa:FBtr0079231
EnsemblMetazoa:FBtr0079232 EnsemblMetazoa:FBtr0307069
EnsemblMetazoa:FBtr0307070 EnsemblMetazoa:FBtr0307071 GeneID:33837
KEGG:dme:Dmel_CG9088 CTD:33837 FlyBase:FBgn0031759
InParanoid:Q9VMJ7 OrthoDB:EOG408KPT PhylomeDB:Q9VMJ7
GenomeRNAi:33837 NextBio:785524 Bgee:Q9VMJ7 GO:GO:0043992
Uniprot:Q9VMJ7
Length = 1838
Score = 715 (256.8 bits), Expect = 6.2e-92, Sum P(3) = 6.2e-92
Identities = 143/281 (50%), Positives = 184/281 (65%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A FK+ YF ++ V H L P+ + +E E+W
Sbjct: 505 EAFGFEQAEREYTLQQFGQMADQFKQEYF-----RKPV------H--LVPTEM-VEREFW 550
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVL 258
RI+ ++V V YGADL T SGFP SSL +YA S WNLNNLP L S+L
Sbjct: 551 RIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSIL 610
Query: 259 AFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEK 318
+DISG+ PW+YVGMCF++FCWH EDH YS+NYLHWG+PK WYGVPGS A E+
Sbjct: 611 GHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEE 670
Query: 319 AMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNC 378
M++ P+LF QPDLLH+LVT ++P++L VPV+ QH+GEFV+TFPRAYH+GFN
Sbjct: 671 TMKQAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQ 730
Query: 379 GFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
G+N AEAVN AP DWL G++ V YS R SHD+L+
Sbjct: 731 GYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELV 771
Score = 154 (59.3 bits), Expect = 6.2e-92, Sum P(3) = 6.2e-92
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF PT EEF++ L YI+KIRS AE GI +I+PP++W+PP + + +F R
Sbjct: 160 ECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKILPPATWSPPFAVDVDKL----RFVPR 215
Query: 91 IQQIDLLQ 98
+Q+++ L+
Sbjct: 216 VQRLNELE 223
Score = 120 (47.3 bits), Expect = 6.2e-92, Sum P(3) = 6.2e-92
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 449 ACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAG 508
AC D + + + T +++K L+ + + + E+ D ER C C LSA
Sbjct: 788 ACYID--MAEMVDTEKKLRKSLLEWGVTRAERRAFELVND--DERHCQECNTTCFLSAVA 843
Query: 509 CKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALE 552
C+C+ CL+H + C C + +I RY+ DE+ +++ L+
Sbjct: 844 CECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLK 887
>UNIPROTKB|F1RUI7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 OMA:ISWQGRA
EMBL:FP102491 Ensembl:ENSSSCT00000013473 ArrayExpress:F1RUI7
Uniprot:F1RUI7
Length = 1516
Score = 694 (249.4 bits), Expect = 1.3e-91, Sum P(3) = 1.3e-91
Identities = 158/383 (41%), Positives = 216/383 (56%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 340 EAFGFEQATREYTLQSFGEMADSFKADYFNMP-----------VH--MVPTEL-VEKEFW 385
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLG-TESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + S + ++YA SGWNLN +P L SV
Sbjct: 386 RLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSV 445
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 446 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE 505
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M+K P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 506 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 565
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ 437
G+N AEAVN DWL G+Q +E Y R SH++L+ K L+
Sbjct: 566 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 625
Query: 438 KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECF 496
K ++ + +L K I + ++E + LP + K + L C+
Sbjct: 626 HKEMFIMVQEERRLRKALLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACY 681
Query: 497 SCFYDL----HLSAAGCKCSPDR 515
C L H++ CKCS R
Sbjct: 682 DCPDGLVCLSHINDL-CKCSSSR 703
Score = 162 (62.1 bits), Expect = 1.3e-91, Sum P(3) = 1.3e-91
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 125 (49.1 bits), Expect = 1.3e-91, Sum P(3) = 1.3e-91
Identities = 42/175 (24%), Positives = 76/175 (43%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 663 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 722
Query: 552 EGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK-ESSSSSPRVENIVE 610
+ ++ A+K + A + + G + E + E++ +S R++N +
Sbjct: 723 KVRAESFDTWANK-VRVA--LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLS 779
Query: 611 GNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSH-NEGNDETQVMNKKAKVK 664
C SR+ ++ P R +GL + + + ++ N+ M++ VK
Sbjct: 780 EAEACVSRALGLVSGQEAGPHR-VAGLQMTLAELRAFLDQMNNLPCAMHQIGDVK 833
>ZFIN|ZDB-GENE-030424-1 [details] [associations]
symbol:kdm5bb "lysine (K)-specific demethylase 5Bb"
species:7955 "Danio rerio" [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030424-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CABZ01042196 EMBL:BX664742
Ensembl:ENSDART00000005583 Bgee:G1K2I1 Uniprot:G1K2I1
Length = 1522
Score = 709 (254.6 bits), Expect = 1.5e-91, Sum P(3) = 1.5e-91
Identities = 138/282 (48%), Positives = 181/282 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ D TL+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 371 EAFGFEQAHRDYTLKAFGEMADSFKSDYFNMP-----------VH--MVPTEL-VEKEFW 416
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP K ++Y GWNLNN+ + SV
Sbjct: 417 RLVGTIQEDVTVEYGADIASKEFGSGFPIKGGRFKIAPHDEKYLQCGWNLNNMAMMTPSV 476
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DI G+ +PWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYG PG A LE
Sbjct: 477 LTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQLE 536
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
M+K P+LF+ QPDLLH+LVT ++P+ L A GVP+Y Q +GEFV+TFPR+YHSGFN
Sbjct: 537 AVMKKLAPELFDSQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRSYHSGFN 596
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
GFN AEAVN VDW+ G+Q V+ Y + HR SHD+++
Sbjct: 597 QGFNFAEAVNFCTVDWMPLGRQCVDHYRQLHRYCVFSHDEMV 638
Score = 141 (54.7 bits), Expect = 1.5e-91, Sum P(3) = 1.5e-91
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 21 PAEACRPIIDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKN 80
PAE P E PVF P+ EEF+D +I KIR AE GIC++ PP W PP A +
Sbjct: 6 PAEFTPP--PECPVFEPSWEEFKDPFAFINKIRPIAEKTGICKVRPPPDWQPPF---ACD 60
Query: 81 IWENAKFSTRIQQIDLLQ 98
+ + F+ RIQ+++ L+
Sbjct: 61 V-DRLHFTPRIQRLNELE 77
Score = 130 (50.8 bits), Expect = 1.5e-91, Sum P(3) = 1.5e-91
Identities = 64/275 (23%), Positives = 118/275 (42%)
Query: 443 NRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEI------DFDLKT--ERE 494
N K C D VL A++ +Q+ + ++L K++KM + +DL ER+
Sbjct: 640 NMAMKADC-LDVVLASAVQKDMQLMIKEERELRE--KVRKMGVAQCELFQYDLLADDERQ 696
Query: 495 CFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGG 554
C C +LSA C C P CL H + CSC I + + R++ D+L +
Sbjct: 697 CVKCRTTCYLSALTCPCRPGVQVCLYHTHDLCSCPISNYTLNYRFTLDDLYPM------- 749
Query: 555 LDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQKESSSSSP-----RVENIV 609
++A+++ A WA T+ K+D + V ++ + S P R +V
Sbjct: 750 MNAVRQRAEYYDDWAS-RVTEVMEAKLDKKRNVTVFRTLLEESNEQSFPENDLLRQLRLV 808
Query: 610 EGNGPCCSRSHVSSEVVQSEPQ-RGTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVC 668
+ CS V+ +++ + Q R +G + S + + Q+ N +
Sbjct: 809 TQDAEKCSS--VAQQLLNGKRQTRYRTGKAKSPNQLTVEEMRSFVRQLYNLPCSLTQAPL 866
Query: 669 IDLNMDVIPDGNE-SKLLLSDSHGKEAIENLKAHL 702
+ ++ I D + S+ LLSD +A+ +++ L
Sbjct: 867 LKELLNSIEDFQQHSEKLLSDEVSADAVSEIESLL 901
Score = 43 (20.2 bits), Expect = 2.0e-82, Sum P(3) = 2.0e-82
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 392 DWLAHGQQAVELYSEQ 407
DW GQ+ Y+EQ
Sbjct: 1323 DWAVSGQEQTVFYTEQ 1338
Score = 37 (18.1 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 321 RKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVP 353
+K +P +E+P + EL + S K + +P
Sbjct: 273 KKEIPIQVKEEPVEIKELNPEPEKSKPKKKNIP 305
>UNIPROTKB|K7GNM7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:FP102491
Ensembl:ENSSSCT00000032687 Uniprot:K7GNM7
Length = 1560
Score = 694 (249.4 bits), Expect = 1.6e-91, Sum P(3) = 1.6e-91
Identities = 158/383 (41%), Positives = 216/383 (56%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 381 EAFGFEQATREYTLQSFGEMADSFKADYFNMP-----------VH--MVPTEL-VEKEFW 426
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLG-TESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + S + ++YA SGWNLN +P L SV
Sbjct: 427 RLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSV 486
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 487 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE 546
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M+K P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 547 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 606
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ 437
G+N AEAVN DWL G+Q +E Y R SH++L+ K L+
Sbjct: 607 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 666
Query: 438 KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECF 496
K ++ + +L K I + ++E + LP + K + L C+
Sbjct: 667 HKEMFIMVQEERRLRKALLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACY 722
Query: 497 SCFYDL----HLSAAGCKCSPDR 515
C L H++ CKCS R
Sbjct: 723 DCPDGLVCLSHINDL-CKCSSSR 744
Score = 162 (62.1 bits), Expect = 1.6e-91, Sum P(3) = 1.6e-91
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 125 (49.1 bits), Expect = 1.6e-91, Sum P(3) = 1.6e-91
Identities = 42/175 (24%), Positives = 76/175 (43%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 704 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 763
Query: 552 EGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK-ESSSSSPRVENIVE 610
+ ++ A+K + A + + G + E + E++ +S R++N +
Sbjct: 764 KVRAESFDTWANK-VRVA--LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLS 820
Query: 611 GNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSH-NEGNDETQVMNKKAKVK 664
C SR+ ++ P R +GL + + + ++ N+ M++ VK
Sbjct: 821 EAEACVSRALGLVSGQEAGPHR-VAGLQMTLAELRAFLDQMNNLPCAMHQIGDVK 874
>MGI|MGI:99781 [details] [associations]
symbol:Kdm5c "lysine (K)-specific demethylase 5C"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99781 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0032453
KO:K11446 CTD:8242 OrthoDB:EOG4894KP ChiTaRS:KDM5C EMBL:AF127245
EMBL:AK008105 EMBL:AK155279 EMBL:AK155427 EMBL:AK155651
EMBL:AK158340 EMBL:AK011577 EMBL:BC043096 EMBL:BC054550 EMBL:Z29651
EMBL:AK129096 EMBL:L29563 EMBL:AF039894 IPI:IPI00112611
IPI:IPI00221399 IPI:IPI00776021 PIR:I48775 PIR:I84689
RefSeq:NP_038696.2 UniGene:Mm.142655 ProteinModelPortal:P41230
SMR:P41230 STRING:P41230 PhosphoSite:P41230 PaxDb:P41230
PRIDE:P41230 Ensembl:ENSMUST00000082177 Ensembl:ENSMUST00000112584
Ensembl:ENSMUST00000112588 GeneID:20591 KEGG:mmu:20591
UCSC:uc009uqc.2 UCSC:uc009uqd.2 UCSC:uc009uqe.2 InParanoid:P41230
NextBio:298901 Bgee:P41230 Genevestigator:P41230
GermOnline:ENSMUSG00000025332 Uniprot:P41230
Length = 1554
Score = 694 (249.4 bits), Expect = 1.9e-91, Sum P(3) = 1.9e-91
Identities = 158/383 (41%), Positives = 216/383 (56%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 381 EAFGFEQATREYTLQSFGEMADSFKADYFNMP-----------VH--MVPTEL-VEKEFW 426
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLG-TESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + S + ++YA SGWNLN +P L SV
Sbjct: 427 RLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSV 486
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 487 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE 546
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M+K P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 547 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 606
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ 437
G+N AEAVN DWL G+Q +E Y R SH++L+ K L+
Sbjct: 607 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 666
Query: 438 KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECF 496
K ++ + +L K I + ++E + LP + K + L C+
Sbjct: 667 HKEMFIMVQEERRLRKALLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACY 722
Query: 497 SCFYDL----HLSAAGCKCSPDR 515
C L H++ CKCS R
Sbjct: 723 DCPDGLVCLSHINDL-CKCSSSR 744
Score = 162 (62.1 bits), Expect = 1.9e-91, Sum P(3) = 1.9e-91
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 124 (48.7 bits), Expect = 1.9e-91, Sum P(3) = 1.9e-91
Identities = 34/129 (26%), Positives = 57/129 (44%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 704 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 763
Query: 552 EGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK-ESSSSSPRVENIVE 610
+ ++ A+K + A + + G + E + E++ +S R++N +
Sbjct: 764 KVRAESFDTWANK-VRVA--LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLS 820
Query: 611 GNGPCCSRS 619
C SR+
Sbjct: 821 EAEACVSRA 829
Score = 41 (19.5 bits), Expect = 1.0e-82, Sum P(3) = 1.0e-82
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 584 ESEVFPMDCCEQKESSSSSPRVENIVEGNGPCCSRSHVSSE 624
ES +P D E + + P+V+ ++E S V++E
Sbjct: 1323 ESLAYPSD---GGEGTGNMPKVQGLLENGDSVTSPEKVATE 1360
>UNIPROTKB|F1MYV2 [details] [associations]
symbol:KDM5C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 KO:K11446 CTD:8242
OMA:ISWQGRA EMBL:DAAA02073278 IPI:IPI00703369 RefSeq:NP_776610.2
UniGene:Bt.8145 PRIDE:F1MYV2 Ensembl:ENSBTAT00000019893
GeneID:281490 KEGG:bta:281490 NextBio:20805465 ArrayExpress:F1MYV2
Uniprot:F1MYV2
Length = 1555
Score = 694 (249.4 bits), Expect = 2.0e-91, Sum P(3) = 2.0e-91
Identities = 158/383 (41%), Positives = 216/383 (56%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 381 EAFGFEQATREYTLQSFGEMADSFKADYFNMP-----------VH--MVPTEL-VEKEFW 426
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLG-TESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + S + ++YA SGWNLN +P L SV
Sbjct: 427 RLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSV 486
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 487 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE 546
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M+K P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 547 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 606
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ 437
G+N AEAVN DWL G+Q +E Y R SH++L+ K L+
Sbjct: 607 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 666
Query: 438 KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECF 496
K ++ + +L K I + ++E + LP + K + L C+
Sbjct: 667 HKEMFIMVQEERRLRKALLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACY 722
Query: 497 SCFYDL----HLSAAGCKCSPDR 515
C L H++ CKCS R
Sbjct: 723 DCPDGLVCLSHINDL-CKCSSSR 744
Score = 162 (62.1 bits), Expect = 2.0e-91, Sum P(3) = 2.0e-91
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 124 (48.7 bits), Expect = 2.0e-91, Sum P(3) = 2.0e-91
Identities = 34/129 (26%), Positives = 57/129 (44%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 704 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 763
Query: 552 EGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK-ESSSSSPRVENIVE 610
+ ++ A+K + A + + G + E + E++ +S R++N +
Sbjct: 764 KVRAESFDTWANK-VRVA--LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLS 820
Query: 611 GNGPCCSRS 619
C SR+
Sbjct: 821 EAEACVSRA 829
Score = 39 (18.8 bits), Expect = 1.6e-82, Sum P(3) = 1.6e-82
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 571 CSDTDGGLVKMDMES-EVFPMDCCEQKESSSSSPRV-ENIVE 610
C+ G VK +E E + + CE S SSP + ++++E
Sbjct: 865 CAMHQIGDVKGILEQVEAYQAEACEALASLPSSPGLLQSLLE 906
>UNIPROTKB|Q30DN6 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 EMBL:DQ156494 RefSeq:NP_001106929.1 UniGene:Cfa.38975
ProteinModelPortal:Q30DN6 SMR:Q30DN6 GeneID:100134936
KEGG:cfa:100134936 CTD:8284 NextBio:20789320 Uniprot:Q30DN6
Length = 1545
Score = 702 (252.2 bits), Expect = 2.2e-91, Sum P(3) = 2.2e-91
Identities = 160/383 (41%), Positives = 219/383 (57%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 374 EAFGFEQATQEYTLQSFGEMADSFKADYFSMP-----------VH--MVPTEL-VEKEFW 419
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLGTES-DLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP +SS S + ++YA SGWNLN +P L SV
Sbjct: 420 RLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSQRILSPEEEEYATSGWNLNVMPVLDQSV 479
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 480 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEQLE 539
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M++ P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 540 EVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 599
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ 437
G+N AEAVN DWL G+Q +E Y R SH++L+ K L+V
Sbjct: 600 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAV 659
Query: 438 KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECF 496
K ++ + +L K I + ++E + LP + K + L C+
Sbjct: 660 HKEMFIMVQEERRLRKALLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACY 715
Query: 497 SCFYDL----HLSAAGCKCSPDR 515
C L H++ CKCS R
Sbjct: 716 DCPDGLVCLSHINDL-CKCSSSR 737
Score = 155 (59.6 bits), Expect = 2.2e-91, Sum P(3) = 2.2e-91
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF PT EF D L YI KIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPTWAEFRDPLDYITKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 122 (48.0 bits), Expect = 2.2e-91, Sum P(3) = 2.2e-91
Identities = 40/154 (25%), Positives = 66/154 (42%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 697 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 756
Query: 552 EGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK-ESSSSSPRVENIVE 610
+ ++ A+K + A + + G + E + E++ +S R+ N +
Sbjct: 757 KIRAESFDTWANK-VRVA--LEVEDGRKRSFEELRALESEARERRFPNSELLQRLRNCMH 813
Query: 611 GNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSV 644
C S+ V V E + TS L+ + + V
Sbjct: 814 EAEACVSQ--VLGLVSGQEARIQTSPLTLTELRV 845
Score = 45 (20.9 bits), Expect = 2.7e-83, Sum P(3) = 2.7e-83
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 523 NIFCSCEIDHRFVI 536
NIF +C +DH V+
Sbjct: 1497 NIFLTCSVDHSSVL 1510
>UNIPROTKB|E2R0S2 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ISWQGRA EMBL:AAEX03026384
Ensembl:ENSCAFT00000025665 Uniprot:E2R0S2
Length = 1520
Score = 691 (248.3 bits), Expect = 2.7e-91, Sum P(3) = 2.7e-91
Identities = 157/383 (40%), Positives = 216/383 (56%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 381 EAFGFEQATREYTLQSFGEMADSFKADYFNMP-----------VH--MVPTEL-VEKEFW 426
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLG-TESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + + + ++YA SGWNLN +P L SV
Sbjct: 427 RLVNSIEEDVTVEYGADIHSKEFGSGFPVSDNKRHLTPEEEEYATSGWNLNVMPVLEQSV 486
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 487 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE 546
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M+K P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 547 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 606
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ 437
G+N AEAVN DWL G+Q +E Y R SH++L+ K L+
Sbjct: 607 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 666
Query: 438 KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECF 496
K ++ + +L K I + ++E + LP + K + L C+
Sbjct: 667 HKEMFIMVQEERRLRKALLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACY 722
Query: 497 SCFYDL----HLSAAGCKCSPDR 515
C L H++ CKCS R
Sbjct: 723 DCPDGLVCLSHINDL-CKCSSSR 744
Score = 162 (62.1 bits), Expect = 2.7e-91, Sum P(3) = 2.7e-91
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 125 (49.1 bits), Expect = 2.7e-91, Sum P(3) = 2.7e-91
Identities = 42/175 (24%), Positives = 76/175 (43%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 704 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 763
Query: 552 EGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK-ESSSSSPRVENIVE 610
+ ++ A+K + A + + G + E + E++ +S R++N +
Sbjct: 764 KVRAESFDTWANK-VRVA--LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLS 820
Query: 611 GNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSH-NEGNDETQVMNKKAKVK 664
C SR+ ++ P R +GL + + + ++ N+ M++ VK
Sbjct: 821 EAEACVSRALGLVSGQEAGPHR-VAGLQMTLAELRAFLDQMNNLPCAMHQIGDVK 874
>RGD|1305429 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISO]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 RGD:1305429 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 HOGENOM:HOG000290719 HOVERGEN:HBG068574
IPI:IPI00781814 EMBL:BC099835 UniGene:Rn.206273 UniGene:Rn.224608
ProteinModelPortal:Q499M6 UCSC:RGD:1305429 InParanoid:Q499M6
Genevestigator:Q499M6 Uniprot:Q499M6
Length = 1099
Score = 784 (281.0 bits), Expect = 2.8e-91, Sum P(2) = 2.8e-91
Identities = 196/552 (35%), Positives = 296/552 (53%)
Query: 154 GFQKYAQNFKECYFGMNDSKEDVKSDGFEHK-RLEPSVVDIEGEYWRIIERPTDEVEVYY 212
GF++ + + FG + ++ KSD F + P+ + +E E+WR++ ++V V Y
Sbjct: 353 GFEQAIREYTLQSFG--EMADNFKSDYFNMPVHMVPTEL-VEKEFWRLVSSIEEDVIVEY 409
Query: 213 GADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVP 271
GAD+ + F SGFP K + ++YA+SGWNLNN+P L SVLA DISG+ VP
Sbjct: 410 GADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVP 469
Query: 272 WLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQ 331
WLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE+ MR+ P+LFE Q
Sbjct: 470 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQ 529
Query: 332 PDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPV 391
PDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN
Sbjct: 530 PDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTA 589
Query: 392 DWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACG 451
DWL G+Q V Y R SH++L+F AA ++ + C
Sbjct: 590 DWLPIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCK 637
Query: 452 KDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDL--KTERECFSCFYDLHLSAAGC 509
+ ++T+ +TR+ +E + ++ + + E+ F+L ER+C +C LSA C
Sbjct: 638 ELTLMTEE-ETRL---RESVVQMGVV--MSEEEV-FELVPDDERQCSACRTTCFLSALTC 690
Query: 510 KCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWA 569
C+P+R CL H CSC + ++ + RY ++L +L+ ++ + ++ +
Sbjct: 691 SCNPERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVNRVTEAL 750
Query: 570 DCSDTDGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQ 627
S K D+ E V D ++K + R + + V+ C S + + Q
Sbjct: 751 SASFNH----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCGSVAQLLLSKKQ 806
Query: 628 SEPQRGTSGLSASHVSVNSHNEGNDETQ----VMNKKAKVK---------HEVCIDLNMD 674
Q SG + + ++V + V+++ +VK HE + MD
Sbjct: 807 KHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMD 866
Query: 675 VIPDGNESKLLL 686
PD ++ ++L+
Sbjct: 867 ETPDSSKLQVLI 878
Score = 732 (262.7 bits), Expect = 7.2e-85, Sum P(2) = 7.2e-85
Identities = 146/283 (51%), Positives = 184/283 (65%)
Query: 140 EKFGFQSG-PDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF+ + TL+ F + A NFK YF M H + P+ + +E E+W
Sbjct: 350 EAFGFEQAIREYTLQSFGEMADNFKSDYFNMP-----------VH--MVPTEL-VEKEFW 395
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP K + ++YA+SGWNLNN+P L SV
Sbjct: 396 RLVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMPVLEQSV 455
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA DISG+ VPWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 456 LAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLE 515
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ MR+ P+LFE QPDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLF 420
G+N AEAVN DWL G+Q V Y R SH++L+F
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIF 618
Score = 146 (56.5 bits), Expect = 2.8e-91, Sum P(2) = 2.8e-91
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D L +I +IR AE GIC+I PP W PP + K +F+ R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKTF----RFTPR 73
Query: 91 IQQIDLLQ 98
+Q+++ L+
Sbjct: 74 VQRLNELE 81
>UNIPROTKB|E9PSW7 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00781814
Ensembl:ENSRNOT00000056198 OMA:IRTRTRN ArrayExpress:E9PSW7
Uniprot:E9PSW7
Length = 1099
Score = 784 (281.0 bits), Expect = 2.8e-91, Sum P(2) = 2.8e-91
Identities = 196/552 (35%), Positives = 296/552 (53%)
Query: 154 GFQKYAQNFKECYFGMNDSKEDVKSDGFEHK-RLEPSVVDIEGEYWRIIERPTDEVEVYY 212
GF++ + + FG + ++ KSD F + P+ + +E E+WR++ ++V V Y
Sbjct: 353 GFEQAIREYTLQSFG--EMADNFKSDYFNMPVHMVPTEL-VEKEFWRLVSSIEEDVIVEY 409
Query: 213 GADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVP 271
GAD+ + F SGFP K + ++YA+SGWNLNN+P L SVLA DISG+ VP
Sbjct: 410 GADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVP 469
Query: 272 WLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQ 331
WLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE+ MR+ P+LFE Q
Sbjct: 470 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQ 529
Query: 332 PDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPV 391
PDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN
Sbjct: 530 PDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTA 589
Query: 392 DWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACG 451
DWL G+Q V Y R SH++L+F AA ++ + C
Sbjct: 590 DWLPIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCK 637
Query: 452 KDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDL--KTERECFSCFYDLHLSAAGC 509
+ ++T+ +TR+ +E + ++ + + E+ F+L ER+C +C LSA C
Sbjct: 638 ELTLMTEE-ETRL---RESVVQMGVV--MSEEEV-FELVPDDERQCSACRTTCFLSALTC 690
Query: 510 KCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWA 569
C+P+R CL H CSC + ++ + RY ++L +L+ ++ + ++ +
Sbjct: 691 SCNPERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVNRVTEAL 750
Query: 570 DCSDTDGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQ 627
S K D+ E V D ++K + R + + V+ C S + + Q
Sbjct: 751 SASFNH----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCGSVAQLLLSKKQ 806
Query: 628 SEPQRGTSGLSASHVSVNSHNEGNDETQ----VMNKKAKVK---------HEVCIDLNMD 674
Q SG + + ++V + V+++ +VK HE + MD
Sbjct: 807 KHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMD 866
Query: 675 VIPDGNESKLLL 686
PD ++ ++L+
Sbjct: 867 ETPDSSKLQVLI 878
Score = 732 (262.7 bits), Expect = 7.2e-85, Sum P(2) = 7.2e-85
Identities = 146/283 (51%), Positives = 184/283 (65%)
Query: 140 EKFGFQSG-PDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF+ + TL+ F + A NFK YF M H + P+ + +E E+W
Sbjct: 350 EAFGFEQAIREYTLQSFGEMADNFKSDYFNMP-----------VH--MVPTEL-VEKEFW 395
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP K + ++YA+SGWNLNN+P L SV
Sbjct: 396 RLVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMPVLEQSV 455
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA DISG+ VPWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 456 LAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLE 515
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ MR+ P+LFE QPDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLF 420
G+N AEAVN DWL G+Q V Y R SH++L+F
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIF 618
Score = 146 (56.5 bits), Expect = 2.8e-91, Sum P(2) = 2.8e-91
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D L +I +IR AE GIC+I PP W PP + K +F+ R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKTF----RFTPR 73
Query: 91 IQQIDLLQ 98
+Q+++ L+
Sbjct: 74 VQRLNELE 81
>UNIPROTKB|B0QZ44 [details] [associations]
symbol:KDM5C "Smcy homolog, X-linked (Mouse), isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:CH471154 EMBL:AL139396 HOGENOM:HOG000290719
UniGene:Hs.631768 HGNC:HGNC:11114 ChiTaRS:KDM5C IPI:IPI00879547
SMR:B0QZ44 Ensembl:ENST00000404049 UCSC:uc004dsa.3
HOVERGEN:HBG068574 Uniprot:B0QZ44
Length = 1559
Score = 694 (249.4 bits), Expect = 3.2e-91, Sum P(3) = 3.2e-91
Identities = 158/383 (41%), Positives = 216/383 (56%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 380 EAFGFEQATREYTLQSFGEMADSFKADYFNMP-----------VH--MVPTEL-VEKEFW 425
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLG-TESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + S + ++YA SGWNLN +P L SV
Sbjct: 426 RLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSV 485
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 486 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE 545
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M+K P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 546 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 605
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ 437
G+N AEAVN DWL G+Q +E Y R SH++L+ K L+
Sbjct: 606 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 665
Query: 438 KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECF 496
K ++ + +L K I + ++E + LP + K + L C+
Sbjct: 666 HKEMFIMVQEERRLRKALLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACY 721
Query: 497 SCFYDL----HLSAAGCKCSPDR 515
C L H++ CKCS R
Sbjct: 722 DCPDGLVCLSHINDL-CKCSSSR 743
Score = 162 (62.1 bits), Expect = 3.2e-91, Sum P(3) = 3.2e-91
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 122 (48.0 bits), Expect = 3.2e-91, Sum P(3) = 3.2e-91
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 703 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 762
Query: 552 EGGLDALKELASK 564
+ ++ A+K
Sbjct: 763 KVRAESFDTWANK 775
>UNIPROTKB|P41229 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AL139396
eggNOG:NOG327026 GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719
CTD:8242 OrthoDB:EOG4894KP EMBL:L25270 EMBL:AK304732 EMBL:BC054499
EMBL:Z29650 IPI:IPI00013185 IPI:IPI00219412 IPI:IPI00640875
IPI:IPI01012687 PIR:I54361 RefSeq:NP_001140174.1 RefSeq:NP_004178.2
UniGene:Hs.631768 PDB:2JRZ PDBsum:2JRZ ProteinModelPortal:P41229
SMR:P41229 DIP:DIP-39663N IntAct:P41229 STRING:P41229
PhosphoSite:P41229 DMDM:117949812 PaxDb:P41229 PRIDE:P41229
DNASU:8242 Ensembl:ENST00000375379 Ensembl:ENST00000375383
Ensembl:ENST00000375401 Ensembl:ENST00000452825 GeneID:8242
KEGG:hsa:8242 UCSC:uc004drz.3 GeneCards:GC0XM053237 HGNC:HGNC:11114
MIM:300534 MIM:314690 neXtProt:NX_P41229 Orphanet:85279
PharmGKB:PA35964 InParanoid:P41229 OMA:ISWQGRA PhylomeDB:P41229
ChiTaRS:KDM5C EvolutionaryTrace:P41229 GenomeRNAi:8242
NextBio:31002 ArrayExpress:P41229 Bgee:P41229 CleanEx:HS_JARID1C
Genevestigator:P41229 GermOnline:ENSG00000126012 Uniprot:P41229
Length = 1560
Score = 694 (249.4 bits), Expect = 3.3e-91, Sum P(3) = 3.3e-91
Identities = 158/383 (41%), Positives = 216/383 (56%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 381 EAFGFEQATREYTLQSFGEMADSFKADYFNMP-----------VH--MVPTEL-VEKEFW 426
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLG-TESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + S + ++YA SGWNLN +P L SV
Sbjct: 427 RLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSV 486
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 487 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE 546
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M+K P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 547 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 606
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ 437
G+N AEAVN DWL G+Q +E Y R SH++L+ K L+
Sbjct: 607 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 666
Query: 438 KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECF 496
K ++ + +L K I + ++E + LP + K + L C+
Sbjct: 667 HKEMFIMVQEERRLRKALLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACY 722
Query: 497 SCFYDL----HLSAAGCKCSPDR 515
C L H++ CKCS R
Sbjct: 723 DCPDGLVCLSHINDL-CKCSSSR 744
Score = 162 (62.1 bits), Expect = 3.3e-91, Sum P(3) = 3.3e-91
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 122 (48.0 bits), Expect = 3.3e-91, Sum P(3) = 3.3e-91
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 704 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 763
Query: 552 EGGLDALKELASK 564
+ ++ A+K
Sbjct: 764 KVRAESFDTWANK 776
>UNIPROTKB|Q38JA7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 KO:K11446 EMBL:DQ223016 RefSeq:NP_001041497.1
UniGene:Cfa.46487 ProteinModelPortal:Q38JA7 SMR:Q38JA7 PRIDE:Q38JA7
GeneID:491894 KEGG:cfa:491894 CTD:8242 InParanoid:Q38JA7
OrthoDB:EOG4894KP NextBio:20864597 Uniprot:Q38JA7
Length = 1556
Score = 691 (248.3 bits), Expect = 3.3e-91, Sum P(3) = 3.3e-91
Identities = 157/383 (40%), Positives = 216/383 (56%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 381 EAFGFEQATREYTLQSFGEMADSFKADYFNMP-----------VH--MVPTEL-VEKEFW 426
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLG-TESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + + + ++YA SGWNLN +P L SV
Sbjct: 427 RLVNSIEEDVTVEYGADIHSKEFGSGFPVSDNKRHLTPEEEEYATSGWNLNVMPVLEQSV 486
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 487 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE 546
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M+K P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 547 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 606
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ 437
G+N AEAVN DWL G+Q +E Y R SH++L+ K L+
Sbjct: 607 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 666
Query: 438 KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECF 496
K ++ + +L K I + ++E + LP + K + L C+
Sbjct: 667 HKEMFIMVQEERRLRKALLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACY 722
Query: 497 SCFYDL----HLSAAGCKCSPDR 515
C L H++ CKCS R
Sbjct: 723 DCPDGLVCLSHINDL-CKCSSSR 744
Score = 162 (62.1 bits), Expect = 3.3e-91, Sum P(3) = 3.3e-91
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 125 (49.1 bits), Expect = 3.3e-91, Sum P(3) = 3.3e-91
Identities = 42/175 (24%), Positives = 76/175 (43%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 704 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 763
Query: 552 EGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK-ESSSSSPRVENIVE 610
+ ++ A+K + A + + G + E + E++ +S R++N +
Sbjct: 764 KVRAESFDTWANK-VRVA--LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLS 820
Query: 611 GNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSH-NEGNDETQVMNKKAKVK 664
C SR+ ++ P R +GL + + + ++ N+ M++ VK
Sbjct: 821 EAEACVSRALGLVSGQEAGPHR-VAGLQMTLAELRAFLDQMNNLPCAMHQIGDVK 874
>UNIPROTKB|E9PFH2 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D IPI:IPI00644955
ProteinModelPortal:E9PFH2 SMR:E9PFH2 PRIDE:E9PFH2
Ensembl:ENST00000440077 ArrayExpress:E9PFH2 Bgee:E9PFH2
Uniprot:E9PFH2
Length = 1476
Score = 687 (246.9 bits), Expect = 3.6e-91, Sum P(3) = 3.6e-91
Identities = 137/282 (48%), Positives = 182/282 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + +L+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 330 EAFGFEQATQEYSLQSFGEMADSFKSDYFNMP-----------VH--MVPTEL-VEKEFW 375
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLD-QYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP ++S S + +YA SGWNLN +P L SV
Sbjct: 376 RLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLDQSV 435
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 436 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE 495
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M+ P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 496 EVMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 555
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
G+N AEAVN DWL G+Q +E Y R SH++L+
Sbjct: 556 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 597
Score = 163 (62.4 bits), Expect = 3.6e-91, Sum P(3) = 3.6e-91
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF+D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
+Q+++ L+
Sbjct: 69 VQRLNELE 76
Score = 126 (49.4 bits), Expect = 3.6e-91, Sum P(3) = 3.6e-91
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C PD CL H N C C +++ RY+ DEL T++ L
Sbjct: 653 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTMLHKL 712
Query: 552 EGGLDALKELASK 564
+ ++ A+K
Sbjct: 713 KIRAESFDTWANK 725
>UNIPROTKB|Q9BY66 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0007283 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 DrugBank:DB00126
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:CH471202 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:U52191 EMBL:D87072 EMBL:AF273841 EMBL:AC010889
EMBL:BC132721 EMBL:BC144102 EMBL:BC146767 EMBL:U52365 EMBL:AF134849
IPI:IPI00219940 IPI:IPI00329577 IPI:IPI00922879
RefSeq:NP_001140177.1 RefSeq:NP_001140178.1 RefSeq:NP_004644.2
UniGene:Hs.80358 PDB:2E6R PDB:2YQE PDBsum:2E6R PDBsum:2YQE
ProteinModelPortal:Q9BY66 SMR:Q9BY66 IntAct:Q9BY66 STRING:Q9BY66
PhosphoSite:Q9BY66 DMDM:17368706 PaxDb:Q9BY66 PRIDE:Q9BY66
Ensembl:ENST00000317961 Ensembl:ENST00000382806
Ensembl:ENST00000541639 GeneID:8284 KEGG:hsa:8284 UCSC:uc004fug.3
UCSC:uc010nwy.3 GeneCards:GC0YM021865 HGNC:HGNC:11115 MIM:426000
neXtProt:NX_Q9BY66 PharmGKB:PA35965 InParanoid:Q9BY66 OMA:TEMVERE
PhylomeDB:Q9BY66 ChiTaRS:KDM5D EvolutionaryTrace:Q9BY66
GenomeRNAi:8284 NextBio:31049 ArrayExpress:Q9BY66 Bgee:Q9BY66
CleanEx:HS_JARID1D Genevestigator:Q9BY66 GermOnline:ENSG00000012817
Uniprot:Q9BY66
Length = 1539
Score = 687 (246.9 bits), Expect = 5.0e-91, Sum P(3) = 5.0e-91
Identities = 137/282 (48%), Positives = 182/282 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + +L+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 371 EAFGFEQATQEYSLQSFGEMADSFKSDYFNMP-----------VH--MVPTEL-VEKEFW 416
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLD-QYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP ++S S + +YA SGWNLN +P L SV
Sbjct: 417 RLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLDQSV 476
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 477 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE 536
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M+ P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 537 EVMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 596
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
G+N AEAVN DWL G+Q +E Y R SH++L+
Sbjct: 597 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELI 638
Score = 163 (62.4 bits), Expect = 5.0e-91, Sum P(3) = 5.0e-91
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF+D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
+Q+++ L+
Sbjct: 69 VQRLNELE 76
Score = 126 (49.4 bits), Expect = 5.0e-91, Sum P(3) = 5.0e-91
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C PD CL H N C C +++ RY+ DEL T++ L
Sbjct: 694 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTMLHKL 753
Query: 552 EGGLDALKELASK 564
+ ++ A+K
Sbjct: 754 KIRAESFDTWANK 766
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 718 (257.8 bits), Expect = 6.0e-91, Sum P(3) = 6.0e-91
Identities = 143/282 (50%), Positives = 181/282 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ D TL F + A FK YF M H + P+ + +E E+W
Sbjct: 341 EAFGFEQAARDYTLRTFGEMADAFKSDYFNMP-----------VH--MVPTEL-VEKEFW 386
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + + ++Y SGWNLNN+P + SV
Sbjct: 387 RLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMPVMEQSV 446
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA +DI G+ +PWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYG PG A LE
Sbjct: 447 LAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLE 506
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
M+K P+LFE QPDLLH+LVT ++P+ L A GVPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 507 DVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFN 566
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
GFN AEAVN VDWL G+Q +E Y R SHD+++
Sbjct: 567 QGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMI 608
Score = 133 (51.9 bits), Expect = 6.0e-91, Sum P(3) = 6.0e-91
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D +I KIR AE GIC++ PP W PP A ++ + F+ R
Sbjct: 9 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPF---ACDV-DKLHFTPR 64
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 65 IQRLNELE 72
Score = 123 (48.4 bits), Expect = 6.0e-91, Sum P(3) = 6.0e-91
Identities = 29/99 (29%), Positives = 47/99 (47%)
Query: 465 QMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANI 524
+M +E +QKL +++ + ER+C+ C +SA C C P CL H
Sbjct: 638 KMLREKVQKL-GVTDSERVAFELFPDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYHVED 696
Query: 525 FCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELAS 563
CSC + RY+ +EL ++ AL+ ++ E AS
Sbjct: 697 LCSCPTYQYKLGYRYTLEELYPMMNALKMRAESYNEWAS 735
Score = 47 (21.6 bits), Expect = 5.7e-83, Sum P(3) = 5.7e-83
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 546 TLVEALEGGLDALKELASKNFKWADCSDTDGGL-VKMDMESEVFPMDCCE 594
TL EA ++AL+ L + N CS+ D L V + + PM CE
Sbjct: 1119 TLGEARLKEMEALRSLRAANEGKVLCSEEDAELKVCVCQKEPAAPMIQCE 1168
>UNIPROTKB|A1YVX4 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
KO:K11446 CTD:8242 EMBL:EF139241 RefSeq:NP_001090902.1
UniGene:Ssc.25162 ProteinModelPortal:A1YVX4 SMR:A1YVX4
GeneID:100037295 KEGG:ssc:100037295 Uniprot:A1YVX4
Length = 1516
Score = 686 (246.5 bits), Expect = 9.3e-91, Sum P(3) = 9.3e-91
Identities = 157/383 (40%), Positives = 215/383 (56%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A +FK Y M H + P+ + +E E+W
Sbjct: 340 EAFGFEQATREYTLQSFGEMADSFKADYSNMP-----------VH--MVPTEL-VEKEFW 385
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLG-TESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + S + ++YA SGWNLN +P L SV
Sbjct: 386 RLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSV 445
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 446 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE 505
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M+K P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 506 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 565
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ 437
G+N AEAVN DWL G+Q +E Y R SH++L+ K L+
Sbjct: 566 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 625
Query: 438 KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECF 496
K ++ + +L K I + ++E + LP + K + L C+
Sbjct: 626 HKEMFIMVQEERRLRKALLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACY 681
Query: 497 SCFYDL----HLSAAGCKCSPDR 515
C L H++ CKCS R
Sbjct: 682 DCPDGLVCLSHINDL-CKCSSSR 703
Score = 162 (62.1 bits), Expect = 9.3e-91, Sum P(3) = 9.3e-91
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 125 (49.1 bits), Expect = 9.3e-91, Sum P(3) = 9.3e-91
Identities = 42/175 (24%), Positives = 76/175 (43%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 663 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 722
Query: 552 EGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK-ESSSSSPRVENIVE 610
+ ++ A+K + A + + G + E + E++ +S R++N +
Sbjct: 723 KVRAESFDTWANK-VRVA--LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLS 779
Query: 611 GNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSH-NEGNDETQVMNKKAKVK 664
C SR+ ++ P R +GL + + + ++ N+ M++ VK
Sbjct: 780 EAEACVSRALGLVSGQEAGPHR-VAGLQMTLAELRAFLDQMNNLPCAMHQIGDVK 833
>MGI|MGI:99780 [details] [associations]
symbol:Kdm5d "lysine (K)-specific demethylase 5D"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99780 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:AF127244 EMBL:AK140971 EMBL:BC059077 EMBL:Z29652
IPI:IPI00123375 IPI:IPI00848809 IPI:IPI00848997 IPI:IPI00850747
PIR:I48776 RefSeq:NP_035549.1 UniGene:Mm.262676
ProteinModelPortal:Q62240 SMR:Q62240 STRING:Q62240
PhosphoSite:Q62240 PRIDE:Q62240 Ensembl:ENSMUST00000055032
GeneID:20592 KEGG:mmu:20592 UCSC:uc009uyz.1 UCSC:uc009uzb.1
InParanoid:Q62240 NextBio:298905 Bgee:Q62240 Genevestigator:Q62240
GermOnline:ENSMUSG00000056673 Uniprot:Q62240
Length = 1548
Score = 686 (246.5 bits), Expect = 1.1e-90, Sum P(3) = 1.1e-90
Identities = 159/383 (41%), Positives = 216/383 (56%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A +FK YF M H + P+ V +E E+W
Sbjct: 380 EAFGFEQATQEYTLQSFGEMADSFKADYFNMP-----------VH--MVPTEV-VEKEFW 425
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLD-QYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP +S S + +YA GWNLN +P L SV
Sbjct: 426 RLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWDLSPEEKEYAACGWNLNVMPVLDQSV 485
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 486 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE 545
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
M++ P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 546 DVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 605
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ 437
G+N AEAVN DWL G+Q +E Y R SH++L+ K L+V
Sbjct: 606 QGYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAV 665
Query: 438 KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECF 496
K ++ + +L K I + ++E + LP + K + L C+
Sbjct: 666 HKEMFIMVQEERRLRKTLLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACY 721
Query: 497 SCFYDL----HLSAAGCKCSPDR 515
C L H++ CKCS +R
Sbjct: 722 DCPDSLVCLSHINDL-CKCSRNR 743
Score = 162 (62.1 bits), Expect = 1.1e-90, Sum P(3) = 1.1e-90
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 125 (49.1 bits), Expect = 1.1e-90, Sum P(3) = 1.1e-90
Identities = 24/73 (32%), Positives = 37/73 (50%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C PD CL H N C C + +++ RY+ DEL +++ L
Sbjct: 703 ERQCIKCKTTCFLSALACYDCPDSLVCLSHINDLCKCSRNRQYLRYRYTLDELPAMLQKL 762
Query: 552 EGGLDALKELASK 564
+ ++ A+K
Sbjct: 763 KIRAESFDNWANK 775
Score = 39 (18.8 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 437 QKKTPGNRKWKDACGKDGVLTKAIKT-RVQMKKEGLQK 473
++K +RK +D K+ + +K +K+ R++ K+E QK
Sbjct: 1458 RQKVVLSRKGEDFTQKE-LESKRVKSSRIKPKEEKFQK 1494
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 715 (256.8 bits), Expect = 3.7e-90, Sum P(3) = 3.7e-90
Identities = 143/282 (50%), Positives = 181/282 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ D TL F + A FK YF M H + P+ + +E E+W
Sbjct: 366 EAFGFEQAARDYTLRTFGEMADAFKSDYFNMP-----------VH--MVPTEL-VEKEFW 411
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + + + ++Y SGWNLNN+P + SV
Sbjct: 412 RLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSV 471
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA +DI G+ +PWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVPG A LE
Sbjct: 472 LAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLE 531
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
M+K P+LF QPDLLH+LVT ++P+ L VPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 532 NVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFN 591
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
GFN AEAVN VDWL G+Q VE Y HR SHD+++
Sbjct: 592 QGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMI 633
Score = 133 (51.9 bits), Expect = 3.7e-90, Sum P(3) = 3.7e-90
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D +I KIR AE GIC++ PP W PP A ++ + F+ R
Sbjct: 31 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPF---ACDV-DKLHFTPR 86
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 87 IQRLNELE 94
Score = 119 (46.9 bits), Expect = 3.7e-90, Sum P(3) = 3.7e-90
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 468 KEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCS 527
+E ++KL ++M+ + ER+C C +SA C C P CL H CS
Sbjct: 666 RETVRKL-GVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCS 724
Query: 528 CEIDHRFVI-LRYSTDELNTLVEALEGGLDALKELA 562
C +++ + RY+ D+L ++ AL+ ++ E A
Sbjct: 725 CP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA 759
Score = 55 (24.4 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 29/114 (25%), Positives = 51/114 (44%)
Query: 373 HSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSE-QHRKTSLSHDKLLFGSVQAAIKALW 431
HS F+ G +C V+P + EL E Q + SL + L+ ++ A
Sbjct: 1327 HSPFSTGRSCIPLHGVSP--------EVNELLMEAQLLQVSLPEIQELYQTLLAKPSPAQ 1378
Query: 432 ELSVLQKKTPGNRKWKDAC-GK-DGVLTKAIKTRVQMKKEGLQKLPSYFKLQKM 483
+ P + K D C GK DG+ + K + ++++EGL + +++KM
Sbjct: 1379 QTDRSSPVRPSSEK-NDCCRGKRDGINSLERKLKRRLEREGLSS-ERWERVKKM 1430
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 715 (256.8 bits), Expect = 3.7e-90, Sum P(3) = 3.7e-90
Identities = 143/282 (50%), Positives = 181/282 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ D TL F + A FK YF M H + P+ + +E E+W
Sbjct: 366 EAFGFEQAARDYTLRTFGEMADAFKSDYFNMP-----------VH--MVPTEL-VEKEFW 411
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + + + ++Y SGWNLNN+P + SV
Sbjct: 412 RLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKISPEEEEYLDSGWNLNNMPVMEQSV 471
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA +DI G+ +PWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVPG A LE
Sbjct: 472 LAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLE 531
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
M+K P+LF QPDLLH+LVT ++P+ L VPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 532 NVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFN 591
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
GFN AEAVN VDWL G+Q VE Y HR SHD+++
Sbjct: 592 QGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMI 633
Score = 133 (51.9 bits), Expect = 3.7e-90, Sum P(3) = 3.7e-90
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D +I KIR AE GIC++ PP W PP A ++ + F+ R
Sbjct: 31 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPF---ACDV-DKLHFTPR 86
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 87 IQRLNELE 94
Score = 119 (46.9 bits), Expect = 3.7e-90, Sum P(3) = 3.7e-90
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 468 KEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCS 527
+E ++KL ++M+ + ER+C C +SA C C P CL H CS
Sbjct: 666 RETVRKL-GVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVKELCS 724
Query: 528 CEIDHRFVI-LRYSTDELNTLVEALEGGLDALKELA 562
C +++ + RY+ D+L ++ AL+ ++ E A
Sbjct: 725 CP-PYKYNLRYRYTLDDLYPMMNALKLRAESYNEWA 759
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 715 (256.8 bits), Expect = 3.8e-90, Sum P(3) = 3.8e-90
Identities = 143/282 (50%), Positives = 181/282 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ D TL F + A FK YF M H + P+ + +E E+W
Sbjct: 368 EAFGFEQAARDYTLRTFGEMADAFKSDYFNMP-----------VH--MVPTEL-VEKEFW 413
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + + + ++Y SGWNLNN+P + SV
Sbjct: 414 RLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKISPEEEEYLDSGWNLNNMPVMEQSV 473
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA +DI G+ +PWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVPG A LE
Sbjct: 474 LAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLE 533
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
M+K P+LF QPDLLH+LVT ++P+ L VPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 534 NVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFN 593
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
GFN AEAVN VDWL G+Q VE Y HR SHD+++
Sbjct: 594 QGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMI 635
Score = 133 (51.9 bits), Expect = 3.8e-90, Sum P(3) = 3.8e-90
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D +I KIR AE GIC++ PP W PP A ++ + F+ R
Sbjct: 31 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPF---ACDV-DKLHFTPR 86
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 87 IQRLNELE 94
Score = 119 (46.9 bits), Expect = 3.8e-90, Sum P(3) = 3.8e-90
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 468 KEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCS 527
+E ++KL ++M+ + ER+C C +SA C C P CL H CS
Sbjct: 668 RETVRKL-GVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVKELCS 726
Query: 528 CEIDHRFVI-LRYSTDELNTLVEALEGGLDALKELA 562
C +++ + RY+ D+L ++ AL+ ++ E A
Sbjct: 727 CP-PYKYNLRYRYTLDDLYPMMNALKLRAESYNEWA 761
>ZFIN|ZDB-GENE-060810-94 [details] [associations]
symbol:kdm5c "lysine (K)-specific demethylase 5C"
species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-060810-94 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0043524 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 KO:K11446
HOGENOM:HOG000290719 CTD:8242 OMA:ISWQGRA HOVERGEN:HBG068574
EMBL:BX537348 IPI:IPI00611775 RefSeq:NP_001116706.1
UniGene:Dr.75967 SMR:B0S6L0 Ensembl:ENSDART00000098657
Ensembl:ENSDART00000127053 GeneID:553406 KEGG:dre:553406
NextBio:20880164 Uniprot:B0S6L0
Length = 1578
Score = 679 (244.1 bits), Expect = 1.1e-89, Sum P(3) = 1.1e-89
Identities = 137/281 (48%), Positives = 181/281 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A FK YF M H + P+ + +E E+W
Sbjct: 415 EAFGFEQATREYTLQSFGEMADTFKADYFNMP-----------VH--MVPTEL-VEKEFW 460
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQ-YAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + S+ ++ YA SGWNLN +P L S+
Sbjct: 461 RLVSSIEEDVTVEYGADIHSKEFGSGFPVNNGKRQLSEEEEEYARSGWNLNVMPVLEQSL 520
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP S A LE
Sbjct: 521 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPCSAAEKLE 580
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M+K P+LFE QPDLLH+LVT ++P++L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 581 EVMKKLTPELFEFQPDLLHQLVTIMNPNILMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 640
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKL 418
G+N AEAVN DWL G+ +E Y + R S ++L
Sbjct: 641 QGYNFAEAVNFCTADWLPTGRSCIEHYRQLRRYCVFSQEEL 681
Score = 162 (62.1 bits), Expect = 1.1e-89, Sum P(3) = 1.1e-89
Identities = 34/68 (50%), Positives = 44/68 (64%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D LGYIAKIR AE GIC+I PP W PP ++ +N F+ R
Sbjct: 13 ECPVFEPSWEEFADPLGYIAKIRPIAEKSGICKIRPPPDWQPPFAVEV----DNFHFTPR 68
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 123 (48.4 bits), Expect = 1.1e-89, Sum P(3) = 1.1e-89
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C C LSA C P+R CL HA CSC + ++ RY+ DEL ++ L
Sbjct: 738 ERQCDKCKTTCFLSALACSNCPERLVCLYHAQDLCSCPSEKLYLRYRYTLDELLAMLHRL 797
Query: 552 EGGLDALKELASKNFKWADCSDTDGGLVKMDMES-EVFPMDCCEQK 596
+ ++ A++ K + + D G K+D++ EV + ++K
Sbjct: 798 KVRAESFDSWANR-VK--EALEQDEGN-KIDIKDLEVLKEEAADKK 839
Score = 37 (18.1 bits), Expect = 1.2e-80, Sum P(3) = 1.2e-80
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 526 CSCEIDHRFVILRYSTDELNTLVEALE 552
CS E+ R + EL TLV+ ++
Sbjct: 862 CSTELLSNSQSSRMTLKELKTLVDTMQ 888
>MGI|MGI:2136980 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:2136980 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927
HOGENOM:HOG000290719 OMA:ECSKPRE ChiTaRS:KDM5A EMBL:AC155720
EMBL:AC078896 EMBL:AK135085 EMBL:AK144877 EMBL:AK166055
EMBL:BC080691 IPI:IPI00849089 RefSeq:NP_666109.2 UniGene:Mm.404761
UniGene:Mm.463658 ProteinModelPortal:Q3UXZ9 SMR:Q3UXZ9
IntAct:Q3UXZ9 STRING:Q3UXZ9 PhosphoSite:Q3UXZ9 PaxDb:Q3UXZ9
PRIDE:Q3UXZ9 Ensembl:ENSMUST00000100996 GeneID:214899
KEGG:mmu:214899 UCSC:uc009dne.2 InParanoid:Q3UXZ9 NextBio:374501
Bgee:Q3UXZ9 CleanEx:MM_RBP2 Genevestigator:Q3UXZ9 Uniprot:Q3UXZ9
Length = 1690
Score = 788 (282.4 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 196/552 (35%), Positives = 296/552 (53%)
Query: 154 GFQKYAQNFKECYFGMNDSKEDVKSDGFEHK-RLEPSVVDIEGEYWRIIERPTDEVEVYY 212
GF++ + + FG + ++ KSD F + P+ + +E E+WR++ ++V V Y
Sbjct: 353 GFEQAVREYTLQSFG--EMADNFKSDYFNMPVHMVPTEL-VEKEFWRLVSSIEEDVIVEY 409
Query: 213 GADLETGAFASGFPKASSLGTE-SDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVP 271
GAD+ + F SGFPK + ++YA+SGWNLNN+P L SVLA DISG+ VP
Sbjct: 410 GADISSKDFGSGFPKKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVP 469
Query: 272 WLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQ 331
WLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE+ MR+ P+LFE Q
Sbjct: 470 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQ 529
Query: 332 PDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPV 391
PDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN
Sbjct: 530 PDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTA 589
Query: 392 DWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACG 451
DWL G+Q V Y R SH++L+F AA ++ + C
Sbjct: 590 DWLPIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCK 637
Query: 452 KDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDL--KTERECFSCFYDLHLSAAGC 509
+ ++T+ +TR+ +E + ++ + + E+ F+L ER+C +C LSA C
Sbjct: 638 ELTLMTEE-ETRL---RESVVQMGVV--MSEEEV-FELVPDDERQCSACRTTCFLSALTC 690
Query: 510 KCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWA 569
C+P+R CL H CSC + ++ + RY ++L +L+ ++ + ++ +
Sbjct: 691 SCNPERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVNRVTEAL 750
Query: 570 DCSDTDGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQ 627
S K D+ E V D ++K + R + + V+ C S + + Q
Sbjct: 751 SASFNH----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCGSVAQLLLSKKQ 806
Query: 628 SEPQRGTSGLSASHVSVNSHNEGNDETQ----VMNKKAKVK---------HEVCIDLNMD 674
Q SG + + ++V + V+++ +VK HE + MD
Sbjct: 807 KHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMD 866
Query: 675 VIPDGNESKLLL 686
PD ++ ++L+
Sbjct: 867 ETPDSSKLQMLI 878
Score = 735 (263.8 bits), Expect = 6.4e-86, Sum P(3) = 6.4e-86
Identities = 147/283 (51%), Positives = 185/283 (65%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A NFK YF M H + P+ + +E E+W
Sbjct: 350 EAFGFEQAVREYTLQSFGEMADNFKSDYFNMP-----------VH--MVPTEL-VEKEFW 395
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLGTE-SDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFPK + ++YA+SGWNLNN+P L SV
Sbjct: 396 RLVSSIEEDVIVEYGADISSKDFGSGFPKKDGQRKMLPEEEEYALSGWNLNNMPVLEQSV 455
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA DISG+ VPWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 456 LAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLE 515
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ MR+ P+LFE QPDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLF 420
G+N AEAVN DWL G+Q V Y R SH++L+F
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIF 618
Score = 145 (56.1 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D L +I +IR AE GIC+I PP W PP + K +F+ R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPFAEKTGICKIRPPKDWQPPFACEVKTF----RFTPR 73
Query: 91 IQQIDLLQ 98
+Q+++ L+
Sbjct: 74 VQRLNELE 81
Score = 49 (22.3 bits), Expect = 6.4e-86, Sum P(3) = 6.4e-86
Identities = 25/92 (27%), Positives = 42/92 (45%)
Query: 405 SEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIK--T 462
SE+ RK L + LFG + K EL + K P +K K K L K K
Sbjct: 1502 SEKKRKRKLEKVEQLFGEGKQKTK---ELKKIDK--PKKKKLKLNVDKSKELNKLAKKLA 1556
Query: 463 RVQMKKEGLQKLPSYFKLQKMEIDFDLKTERE 494
+ + +K+ +K + K++ ++ + K ER+
Sbjct: 1557 KEEERKKKKEKAAAA-KVELVKESTEKKRERK 1587
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 158 YAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDI 193
Y+ K C G + ++ + + LEP V+++
Sbjct: 1402 YSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLEL 1437
>UNIPROTKB|F1Q4J4 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927 OMA:ECSKPRE
EMBL:AAEX03015319 EMBL:AAEX03015320 RefSeq:XP_854690.3
Ensembl:ENSCAFT00000025008 GeneID:477727 KEGG:cfa:477727
Uniprot:F1Q4J4
Length = 1688
Score = 784 (281.0 bits), Expect = 6.4e-89, Sum P(2) = 6.4e-89
Identities = 195/550 (35%), Positives = 290/550 (52%)
Query: 154 GFQKYAQNFKECYFGMNDSKEDVKSDGFEHK-RLEPSVVDIEGEYWRIIERPTDEVEVYY 212
GF++ + + FG + ++ KSD F + P+ + +E E+WR++ ++V V Y
Sbjct: 353 GFEQAVREYTLQSFG--EMADNFKSDYFNMPVHMVPTEL-VEKEFWRLVSSIEEDVIVEY 409
Query: 213 GADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVP 271
GAD+ + F SGFP K + ++YA+SGWNLNN+P L SVLA DISG+ VP
Sbjct: 410 GADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVP 469
Query: 272 WLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQ 331
WLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE+ MR+ P+LFE Q
Sbjct: 470 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQ 529
Query: 332 PDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPV 391
PDLLH+LVT ++P++L GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN
Sbjct: 530 PDLLHQLVTIMNPNILMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTA 589
Query: 392 DWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACG 451
DWL G+Q V Y R SH++L+F AA ++ + C
Sbjct: 590 DWLPIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCK 637
Query: 452 KDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKC 511
+ ++T+ +TR++ + L S ++ ++ D ER+C +C LSA C C
Sbjct: 638 ELTLMTEE-ETRLRESVVQMGVLMSEEEVFELVPD----DERQCSACRTTCFLSALTCSC 692
Query: 512 SPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADC 571
+P+R CL H N C C + + + RY ++L +L+ ++ + S+ +
Sbjct: 693 NPERLVCLYHPNDLCPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSA 752
Query: 572 SDTDGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQSE 629
+ K D+ E V D ++K + R + + V+ C S + + Q
Sbjct: 753 NFNH----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCASVAQLLLSKKQKH 808
Query: 630 PQRGTSGLSASHVSVNSHNEG-----------NDETQVMNKKAKVK--HEVCIDLNMDVI 676
Q SG + + ++V + QV N V+ HE + MD
Sbjct: 809 RQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDET 868
Query: 677 PDGNESKLLL 686
PD ++ ++L+
Sbjct: 869 PDSSKLQMLI 878
Score = 731 (262.4 bits), Expect = 2.2e-85, Sum P(3) = 2.2e-85
Identities = 146/283 (51%), Positives = 185/283 (65%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A NFK YF M H + P+ + +E E+W
Sbjct: 350 EAFGFEQAVREYTLQSFGEMADNFKSDYFNMP-----------VH--MVPTEL-VEKEFW 395
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP K + ++YA+SGWNLNN+P L SV
Sbjct: 396 RLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNNMPVLEQSV 455
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA DISG+ VPWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 456 LAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLE 515
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ MR+ P+LFE QPDLLH+LVT ++P++L GVPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNILMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLF 420
G+N AEAVN DWL G+Q V Y R SH++L+F
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIF 618
Score = 147 (56.8 bits), Expect = 6.4e-89, Sum P(2) = 6.4e-89
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D L +I +IR AE GIC+I PP W PP + K+ +F+ R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKSF----RFTPR 73
Query: 91 IQQIDLLQ 98
+Q+++ L+
Sbjct: 74 VQRLNELE 81
Score = 46 (21.3 bits), Expect = 2.2e-85, Sum P(3) = 2.2e-85
Identities = 21/69 (30%), Positives = 32/69 (46%)
Query: 405 SEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRV 464
SE+ RK L + LFG + K EL + K P +K K + K L K K ++
Sbjct: 1500 SEKKRKRKLEKVEQLFGEGKQKSK---ELKKMDK--PKKKKLKLSAEKSKELNKLAK-KL 1553
Query: 465 QMKKEGLQK 473
++E +K
Sbjct: 1554 AKEEERKKK 1562
Score = 39 (18.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 158 YAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDI 193
Y+ K C G + ++ + + LEP V+++
Sbjct: 1400 YSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLEL 1435
>UNIPROTKB|F1MQ59 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:DAAA02014587
IPI:IPI00715082 Ensembl:ENSBTAT00000027280 Uniprot:F1MQ59
Length = 1693
Score = 783 (280.7 bits), Expect = 6.5e-89, Sum P(2) = 6.5e-89
Identities = 196/553 (35%), Positives = 295/553 (53%)
Query: 154 GFQKYAQNFKECYFGMNDSKEDVKSDGFEHK-RLEPSVVDIEGEYWRIIERPTDEVEVYY 212
GF++ + + FG + ++ KSD F + P+ + +E E+WR++ ++V V Y
Sbjct: 353 GFEQAVREYTLQSFG--EMADNFKSDYFNMPVHMVPTEL-VEKEFWRLVSSIEEDVIVEY 409
Query: 213 GADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVP 271
GAD+ + F SGFP K + ++YA+SGWNLNN+P L SVLA DISG+ VP
Sbjct: 410 GADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVP 469
Query: 272 WLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQ 331
WLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE+ MR+ P+LFE Q
Sbjct: 470 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQ 529
Query: 332 PDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPV 391
PDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN
Sbjct: 530 PDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTA 589
Query: 392 DWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACG 451
DWL G+Q V Y R SH++L+F AA ++ + C
Sbjct: 590 DWLPIGRQCVSHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCK 637
Query: 452 KDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDL--KTERECFSCFYDLHLSAAGC 509
+ +LT+ +TR+ +E + ++ + + E+ F+L ER+C +C LSA C
Sbjct: 638 ELTLLTEE-ETRL---RESVMQMGVL--MSEEEV-FELVPDDERQCSACRTTCFLSALTC 690
Query: 510 KCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKW- 568
C+P+R CL H C C + + + RY ++L +L+ ++ + S+ +
Sbjct: 691 SCNPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEAL 750
Query: 569 -ADCSDTDGGLVKMDMESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVV 626
A+ + G L+++ + E D ++K + R + + V+ C S + +
Sbjct: 751 SANFNHKKGDLIELRVMLE----DAEDRKYPENDLFRKLRDAVKEAETCASVAQLLLSKK 806
Query: 627 QSEPQRGTSGLSASHVSVNSHNEG-----------NDETQVMNKKAKVK--HEVCIDLNM 673
Q Q G + + ++V + QV N V+ HE + M
Sbjct: 807 QKHRQSPDGGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMM 866
Query: 674 DVIPDGNESKLLL 686
D PD ++ ++L+
Sbjct: 867 DETPDSSKLQMLI 879
Score = 732 (262.7 bits), Expect = 8.4e-86, Sum P(3) = 8.4e-86
Identities = 147/283 (51%), Positives = 185/283 (65%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A NFK YF M H + P+ + +E E+W
Sbjct: 350 EAFGFEQAVREYTLQSFGEMADNFKSDYFNMP-----------VH--MVPTEL-VEKEFW 395
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP K + ++YA+SGWNLNN+P L SV
Sbjct: 396 RLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNNMPVLEQSV 455
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA DISG+ VPWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 456 LAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLE 515
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ MR+ P+LFE QPDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLF 420
G+N AEAVN DWL G+Q V Y R SH++L+F
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVSHYRRLRRHCVFSHEELIF 618
Score = 148 (57.2 bits), Expect = 6.5e-89, Sum P(2) = 6.5e-89
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D L +I +IR AE GIC+I PP W PP + K+ +F+ R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPMAEKTGICKIRPPKDWQPPFACEVKSF----RFTPR 73
Query: 91 IQQIDLLQ 98
+Q+++ L+
Sbjct: 74 VQRLNELE 81
Score = 48 (22.0 bits), Expect = 8.4e-86, Sum P(3) = 8.4e-86
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 405 SEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIK--T 462
SE+ RK L + LFG + K EL + K P +K K + K L K K
Sbjct: 1505 SEKKRKRKLEKVEQLFGEGKQKSK---ELKKMDK--PKKKKLKLSAEKSKELNKLAKKLA 1559
Query: 463 RVQMKKEGLQKLPSYFKLQKMEIDFDLKTERE 494
+ + +K+ +K + K++ ++ + K E++
Sbjct: 1560 KEEERKKKKEKAAAA-KVELVKESTEKKREKK 1590
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 710 (255.0 bits), Expect = 7.8e-89, Sum P(3) = 7.8e-89
Identities = 142/282 (50%), Positives = 181/282 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ D TL F + A FK YF M H + P+ + +E E+W
Sbjct: 365 EAFGFEQAARDYTLRTFGEMADAFKSDYFNMP-----------VH--MVPTEL-VEKEFW 410
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + + + ++Y SGWNLNN+P + SV
Sbjct: 411 RLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKVKLSPEEEEYLDSGWNLNNMPVMEQSV 470
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA +DI G+ +PWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVPG A LE
Sbjct: 471 LAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGFAAEQLE 530
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
M++ P+LF QPDLLH+LVT ++P+ L VPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 531 AVMKRLAPELFVSQPDLLHQLVTIMNPNTLMTHQVPVYRTNQCAGEFVITFPRAYHSGFN 590
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
GFN AEAVN VDWL G+Q VE Y HR SHD+++
Sbjct: 591 QGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMI 632
Score = 119 (46.9 bits), Expect = 7.8e-89, Sum P(3) = 7.8e-89
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ E F D +I KIR AE GIC++ PP W PP A ++ + F+ R
Sbjct: 31 ECPVFEPSWE-FADPFAFIHKIRPIAEQTGICKVRPPPDWQPPF---ACDV-DKLHFTPR 85
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 86 IQRLNELE 93
Score = 119 (46.9 bits), Expect = 7.8e-89, Sum P(3) = 7.8e-89
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 468 KEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCS 527
+E ++KL ++M+ + ER+C C +SA C C P CL H CS
Sbjct: 665 RETVRKL-GVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCS 723
Query: 528 CEIDHRFVI-LRYSTDELNTLVEALEGGLDALKELA 562
C +++ + RY+ D+L ++ AL+ ++ E A
Sbjct: 724 CP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA 758
Score = 37 (18.1 bits), Expect = 3.2e-80, Sum P(3) = 3.2e-80
Identities = 17/80 (21%), Positives = 37/80 (46%)
Query: 414 SHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQK 473
SH++L ++ + L+ L + +TP KD +L + + +K ++
Sbjct: 832 SHNQLTVNELRQFVTQLYALPCVLSQTP---LLKD------LLNRVEDFQQHSQKLLSEE 882
Query: 474 LPSYFKLQKM-EIDFDLKTE 492
+PS +LQ + ++ F+ E
Sbjct: 883 MPSAAELQDLLDVSFEFDVE 902
>UNIPROTKB|E9PSM3 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005737 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 IPI:IPI00365351
Ensembl:ENSRNOT00000034548 NextBio:665124 ArrayExpress:E9PSM3
Uniprot:E9PSM3
Length = 1690
Score = 784 (281.0 bits), Expect = 8.2e-89, Sum P(2) = 8.2e-89
Identities = 196/552 (35%), Positives = 296/552 (53%)
Query: 154 GFQKYAQNFKECYFGMNDSKEDVKSDGFEHK-RLEPSVVDIEGEYWRIIERPTDEVEVYY 212
GF++ + + FG + ++ KSD F + P+ + +E E+WR++ ++V V Y
Sbjct: 353 GFEQAIREYTLQSFG--EMADNFKSDYFNMPVHMVPTEL-VEKEFWRLVSSIEEDVIVEY 409
Query: 213 GADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVP 271
GAD+ + F SGFP K + ++YA+SGWNLNN+P L SVLA DISG+ VP
Sbjct: 410 GADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVP 469
Query: 272 WLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQ 331
WLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE+ MR+ P+LFE Q
Sbjct: 470 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQ 529
Query: 332 PDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPV 391
PDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN
Sbjct: 530 PDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTA 589
Query: 392 DWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACG 451
DWL G+Q V Y R SH++L+F AA ++ + C
Sbjct: 590 DWLPIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCK 637
Query: 452 KDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDL--KTERECFSCFYDLHLSAAGC 509
+ ++T+ +TR+ +E + ++ + + E+ F+L ER+C +C LSA C
Sbjct: 638 ELTLMTEE-ETRL---RESVVQMGVV--MSEEEV-FELVPDDERQCSACRTTCFLSALTC 690
Query: 510 KCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWA 569
C+P+R CL H CSC + ++ + RY ++L +L+ ++ + ++ +
Sbjct: 691 SCNPERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVNRVTEAL 750
Query: 570 DCSDTDGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQ 627
S K D+ E V D ++K + R + + V+ C S + + Q
Sbjct: 751 SASFNH----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCGSVAQLLLSKKQ 806
Query: 628 SEPQRGTSGLSASHVSVNSHNEGNDETQ----VMNKKAKVK---------HEVCIDLNMD 674
Q SG + + ++V + V+++ +VK HE + MD
Sbjct: 807 KHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMD 866
Query: 675 VIPDGNESKLLL 686
PD ++ ++L+
Sbjct: 867 ETPDSSKLQVLI 878
Score = 732 (262.7 bits), Expect = 4.5e-85, Sum P(3) = 4.5e-85
Identities = 146/283 (51%), Positives = 184/283 (65%)
Query: 140 EKFGFQSG-PDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF+ + TL+ F + A NFK YF M H + P+ + +E E+W
Sbjct: 350 EAFGFEQAIREYTLQSFGEMADNFKSDYFNMP-----------VH--MVPTEL-VEKEFW 395
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP K + ++YA+SGWNLNN+P L SV
Sbjct: 396 RLVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMPVLEQSV 455
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA DISG+ VPWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 456 LAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLE 515
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ MR+ P+LFE QPDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLF 420
G+N AEAVN DWL G+Q V Y R SH++L+F
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIF 618
Score = 146 (56.5 bits), Expect = 8.2e-89, Sum P(2) = 8.2e-89
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D L +I +IR AE GIC+I PP W PP + K +F+ R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKTF----RFTPR 73
Query: 91 IQQIDLLQ 98
+Q+++ L+
Sbjct: 74 VQRLNELE 81
Score = 43 (20.2 bits), Expect = 4.5e-85, Sum P(3) = 4.5e-85
Identities = 24/92 (26%), Positives = 40/92 (43%)
Query: 405 SEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIK--T 462
SE+ RK L + FG + K EL + K P +K K K L K K
Sbjct: 1502 SEKKRKRKLEKVEQFFGEGKQKTK---ELKKIDK--PKKKKLKLNVDKSKELNKLAKKLA 1556
Query: 463 RVQMKKEGLQKLPSYFKLQKMEIDFDLKTERE 494
+ + +K+ +K + K++ + + K ER+
Sbjct: 1557 KEEERKKKKEKAAAA-KVELAKESTEKKRERK 1587
Score = 39 (18.8 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 158 YAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDI 193
Y+ K C G + ++ + + LEP V+++
Sbjct: 1402 YSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLEL 1437
>UNIPROTKB|F5H1F7 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A IPI:IPI01018722
ProteinModelPortal:F5H1F7 SMR:F5H1F7 Ensembl:ENST00000382815
ArrayExpress:F5H1F7 Bgee:F5H1F7 Uniprot:F5H1F7
Length = 1636
Score = 779 (279.3 bits), Expect = 1.8e-88, Sum P(2) = 1.8e-88
Identities = 195/550 (35%), Positives = 289/550 (52%)
Query: 154 GFQKYAQNFKECYFGMNDSKEDVKSDGFEHK-RLEPSVVDIEGEYWRIIERPTDEVEVYY 212
GF++ + + FG + ++ KSD F + P+ + +E E+WR++ ++V V Y
Sbjct: 353 GFEQAVREYTLQSFG--EMADNFKSDYFNMPVHMVPTEL-VEKEFWRLVSSIEEDVIVEY 409
Query: 213 GADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVP 271
GAD+ + F SGFP K + ++YA+SGWNLNN+P L SVLA DISG+ VP
Sbjct: 410 GADISSKDFGSGFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVP 469
Query: 272 WLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQ 331
WLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE+ MR+ P+LFE Q
Sbjct: 470 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQ 529
Query: 332 PDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPV 391
PDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN
Sbjct: 530 PDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTA 589
Query: 392 DWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACG 451
DWL G+Q V Y R SH++L+F AA ++ + C
Sbjct: 590 DWLPIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCK 637
Query: 452 KDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKC 511
+ ++T+ +TR++ + L S ++ ++ D ER+C +C LSA C C
Sbjct: 638 ELTLMTEE-ETRLRESVVQMGVLMSEEEVFELVPD----DERQCSACRTTCFLSALTCSC 692
Query: 512 SPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADC 571
+P+R CL H C C + + + RY ++L +L+ ++ + S+ +
Sbjct: 693 NPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSA 752
Query: 572 SDTDGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQSE 629
+ K D+ E V D ++K + R + + V+ C S + + Q
Sbjct: 753 NFNH----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCASVAQLLLSKKQKH 808
Query: 630 PQRGTSGLSASHVSVNSHNEG-----------NDETQVMNKKAKVK--HEVCIDLNMDVI 676
Q SG + + ++V + QV N V+ HE + MD
Sbjct: 809 RQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDET 868
Query: 677 PDGNESKLLL 686
PD ++ ++L+
Sbjct: 869 PDSSKLQMLI 878
Score = 732 (262.7 bits), Expect = 8.3e-86, Sum P(3) = 8.3e-86
Identities = 147/283 (51%), Positives = 185/283 (65%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A NFK YF M H + P+ + +E E+W
Sbjct: 350 EAFGFEQAVREYTLQSFGEMADNFKSDYFNMP-----------VH--MVPTEL-VEKEFW 395
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP K + ++YA+SGWNLNN+P L SV
Sbjct: 396 RLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQSV 455
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA DISG+ VPWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 456 LAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLE 515
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ MR+ P+LFE QPDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLF 420
G+N AEAVN DWL G+Q V Y R SH++L+F
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIF 618
Score = 147 (56.8 bits), Expect = 1.8e-88, Sum P(2) = 1.8e-88
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D L +I +IR AE GIC+I PP W PP + K+ +F+ R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKSF----RFTPR 73
Query: 91 IQQIDLLQ 98
+Q+++ L+
Sbjct: 74 VQRLNELE 81
Score = 48 (22.0 bits), Expect = 8.3e-86, Sum P(3) = 8.3e-86
Identities = 24/92 (26%), Positives = 42/92 (45%)
Query: 405 SEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIK--T 462
SE+ RK L + LFG + K EL + K P +K K K L K K
Sbjct: 1502 SEKKRKRKLEKVEQLFGEGKQKSK---ELKKMDK--PRKKKLKLGADKSKELNKLAKKLA 1556
Query: 463 RVQMKKEGLQKLPSYFKLQKMEIDFDLKTERE 494
+ + +K+ +K + K++ ++ + K E++
Sbjct: 1557 KEEERKKKKEKAAAA-KVELVKESTEKKREKK 1587
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 158 YAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDI 193
Y+ K C G + ++ + + LEP V+++
Sbjct: 1402 YSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLEL 1437
>UNIPROTKB|P29375 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0016568 GO:GO:0006366
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 eggNOG:NOG327026 KO:K11446 EMBL:S66431 EMBL:AB209999
EMBL:BC048307 EMBL:BC053893 EMBL:BC110916 IPI:IPI00021363
IPI:IPI01014284 PIR:I78879 RefSeq:NP_001036068.1 UniGene:Hs.76272
PDB:2JXJ PDB:2KGG PDB:2KGI PDB:3GL6 PDBsum:2JXJ PDBsum:2KGG
PDBsum:2KGI PDBsum:3GL6 ProteinModelPortal:P29375 SMR:P29375
DIP:DIP-472N IntAct:P29375 STRING:P29375 PhosphoSite:P29375
DMDM:215274124 PaxDb:P29375 PRIDE:P29375 Ensembl:ENST00000399788
GeneID:5927 KEGG:hsa:5927 UCSC:uc001qif.1 CTD:5927
GeneCards:GC12M000389 H-InvDB:HIX0010308 HGNC:HGNC:9886
HPA:HPA006201 MIM:180202 neXtProt:NX_P29375 PharmGKB:PA34250
HOGENOM:HOG000290719 OMA:ECSKPRE OrthoDB:EOG4GB758 ChiTaRS:KDM5A
EvolutionaryTrace:P29375 GenomeRNAi:5927 NextBio:23088
ArrayExpress:P29375 Bgee:P29375 CleanEx:HS_JARID1A CleanEx:HS_RBP2
Genevestigator:P29375 GermOnline:ENSG00000073614 Uniprot:P29375
Length = 1690
Score = 779 (279.3 bits), Expect = 2.2e-88, Sum P(2) = 2.2e-88
Identities = 195/550 (35%), Positives = 289/550 (52%)
Query: 154 GFQKYAQNFKECYFGMNDSKEDVKSDGFEHK-RLEPSVVDIEGEYWRIIERPTDEVEVYY 212
GF++ + + FG + ++ KSD F + P+ + +E E+WR++ ++V V Y
Sbjct: 353 GFEQAVREYTLQSFG--EMADNFKSDYFNMPVHMVPTEL-VEKEFWRLVSSIEEDVIVEY 409
Query: 213 GADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVP 271
GAD+ + F SGFP K + ++YA+SGWNLNN+P L SVLA DISG+ VP
Sbjct: 410 GADISSKDFGSGFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVP 469
Query: 272 WLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQ 331
WLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE+ MR+ P+LFE Q
Sbjct: 470 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQ 529
Query: 332 PDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPV 391
PDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN
Sbjct: 530 PDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTA 589
Query: 392 DWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACG 451
DWL G+Q V Y R SH++L+F AA ++ + C
Sbjct: 590 DWLPIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCK 637
Query: 452 KDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKC 511
+ ++T+ +TR++ + L S ++ ++ D ER+C +C LSA C C
Sbjct: 638 ELTLMTEE-ETRLRESVVQMGVLMSEEEVFELVPD----DERQCSACRTTCFLSALTCSC 692
Query: 512 SPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADC 571
+P+R CL H C C + + + RY ++L +L+ ++ + S+ +
Sbjct: 693 NPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSA 752
Query: 572 SDTDGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQSE 629
+ K D+ E V D ++K + R + + V+ C S + + Q
Sbjct: 753 NFNH----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCASVAQLLLSKKQKH 808
Query: 630 PQRGTSGLSASHVSVNSHNEG-----------NDETQVMNKKAKVK--HEVCIDLNMDVI 676
Q SG + + ++V + QV N V+ HE + MD
Sbjct: 809 RQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDET 868
Query: 677 PDGNESKLLL 686
PD ++ ++L+
Sbjct: 869 PDSSKLQMLI 878
Score = 732 (262.7 bits), Expect = 1.1e-85, Sum P(3) = 1.1e-85
Identities = 147/283 (51%), Positives = 185/283 (65%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A NFK YF M H + P+ + +E E+W
Sbjct: 350 EAFGFEQAVREYTLQSFGEMADNFKSDYFNMP-----------VH--MVPTEL-VEKEFW 395
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP K + ++YA+SGWNLNN+P L SV
Sbjct: 396 RLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQSV 455
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA DISG+ VPWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 456 LAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLE 515
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ MR+ P+LFE QPDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLF 420
G+N AEAVN DWL G+Q V Y R SH++L+F
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIF 618
Score = 147 (56.8 bits), Expect = 2.2e-88, Sum P(2) = 2.2e-88
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D L +I +IR AE GIC+I PP W PP + K+ +F+ R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKSF----RFTPR 73
Query: 91 IQQIDLLQ 98
+Q+++ L+
Sbjct: 74 VQRLNELE 81
Score = 48 (22.0 bits), Expect = 1.1e-85, Sum P(3) = 1.1e-85
Identities = 24/92 (26%), Positives = 42/92 (45%)
Query: 405 SEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIK--T 462
SE+ RK L + LFG + K EL + K P +K K K L K K
Sbjct: 1502 SEKKRKRKLEKVEQLFGEGKQKSK---ELKKMDK--PRKKKLKLGADKSKELNKLAKKLA 1556
Query: 463 RVQMKKEGLQKLPSYFKLQKMEIDFDLKTERE 494
+ + +K+ +K + K++ ++ + K E++
Sbjct: 1557 KEEERKKKKEKAAAA-KVELVKESTEKKREKK 1587
Score = 39 (18.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 158 YAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDI 193
Y+ K C G + ++ + + LEP V+++
Sbjct: 1402 YSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLEL 1437
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 718 (257.8 bits), Expect = 3.8e-88, Sum P(3) = 3.8e-88
Identities = 143/282 (50%), Positives = 181/282 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ D TL F + A FK YF M H + P+ + +E E+W
Sbjct: 329 EAFGFEQAARDYTLRTFGEMADAFKSDYFNMP-----------VH--MVPTEL-VEKEFW 374
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + + ++Y SGWNLNN+P + SV
Sbjct: 375 RLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMPVMEQSV 434
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA +DI G+ +PWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYG PG A LE
Sbjct: 435 LAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLE 494
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
M+K P+LFE QPDLLH+LVT ++P+ L A GVPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 495 DVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFN 554
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
GFN AEAVN VDWL G+Q +E Y R SHD+++
Sbjct: 555 QGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMI 596
Score = 123 (48.4 bits), Expect = 3.8e-88, Sum P(3) = 3.8e-88
Identities = 29/99 (29%), Positives = 47/99 (47%)
Query: 465 QMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANI 524
+M +E +QKL +++ + ER+C+ C +SA C C P CL H
Sbjct: 626 KMLREKVQKL-GVTDSERVAFELFPDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYHVED 684
Query: 525 FCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELAS 563
CSC + RY+ +EL ++ AL+ ++ E AS
Sbjct: 685 LCSCPTYQYKLGYRYTLEELYPMMNALKMRAESYNEWAS 723
Score = 106 (42.4 bits), Expect = 3.8e-88, Sum P(3) = 3.8e-88
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 34 VFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTRIQQ 93
VF P+ EEF D +I +R AE GIC++ PP W PP A ++ + F+ RIQ+
Sbjct: 1 VFEPSWEEFADPFAFIM-LRPIAEQTGICKVRPPPDWQPPF---ACDV-DKLHFTPRIQR 55
Query: 94 IDLLQ 98
++ L+
Sbjct: 56 LNELE 60
Score = 47 (21.6 bits), Expect = 3.6e-80, Sum P(3) = 3.6e-80
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 546 TLVEALEGGLDALKELASKNFKWADCSDTDGGL-VKMDMESEVFPMDCCE 594
TL EA ++AL+ L + N CS+ D L V + + PM CE
Sbjct: 1107 TLGEARLKEMEALRSLRAANEGKVLCSEEDAELKVCVCQKEPAAPMIQCE 1156
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 718 (257.8 bits), Expect = 4.1e-88, Sum P(3) = 4.1e-88
Identities = 143/282 (50%), Positives = 181/282 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ D TL F + A FK YF M H + P+ + +E E+W
Sbjct: 340 EAFGFEQAARDYTLRTFGEMADAFKSDYFNMP-----------VH--MVPTEL-VEKEFW 385
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + + ++Y SGWNLNN+P + SV
Sbjct: 386 RLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMPVMEQSV 445
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA +DI G+ +PWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYG PG A LE
Sbjct: 446 LAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLE 505
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
M+K P+LFE QPDLLH+LVT ++P+ L A GVPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 506 DVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFN 565
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
GFN AEAVN VDWL G+Q +E Y R SHD+++
Sbjct: 566 QGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMI 607
Score = 123 (48.4 bits), Expect = 4.1e-88, Sum P(3) = 4.1e-88
Identities = 29/99 (29%), Positives = 47/99 (47%)
Query: 465 QMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANI 524
+M +E +QKL +++ + ER+C+ C +SA C C P CL H
Sbjct: 637 KMLREKVQKL-GVTDSERVAFELFPDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYHVED 695
Query: 525 FCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELAS 563
CSC + RY+ +EL ++ AL+ ++ E AS
Sbjct: 696 LCSCPTYQYKLGYRYTLEELYPMMNALKMRAESYNEWAS 734
Score = 106 (42.4 bits), Expect = 4.1e-88, Sum P(3) = 4.1e-88
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 34 VFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTRIQQ 93
VF P+ EEF D +I +R AE GIC++ PP W PP A ++ + F+ RIQ+
Sbjct: 12 VFEPSWEEFADPFAFIM-LRPIAEQTGICKVRPPPDWQPPF---ACDV-DKLHFTPRIQR 66
Query: 94 IDLLQ 98
++ L+
Sbjct: 67 LNELE 71
Score = 47 (21.6 bits), Expect = 3.9e-80, Sum P(3) = 3.9e-80
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 546 TLVEALEGGLDALKELASKNFKWADCSDTDGGL-VKMDMESEVFPMDCCE 594
TL EA ++AL+ L + N CS+ D L V + + PM CE
Sbjct: 1118 TLGEARLKEMEALRSLRAANEGKVLCSEEDAELKVCVCQKEPAAPMIQCE 1167
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 712 (255.7 bits), Expect = 5.3e-83, Sum P(4) = 5.3e-83
Identities = 143/282 (50%), Positives = 181/282 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ D TL F + A FK YF M H + P+ + +E E+W
Sbjct: 306 EAFGFEQAARDYTLRTFGEMADAFKSDYFNMP-----------VH--MVPTEL-VEKEFW 351
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + + + ++Y SGWNLNN+P + SV
Sbjct: 352 RLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKVKLSPEEEEYLDSGWNLNNMPVMEQSV 411
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA +DI G+ +PWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVPG A LE
Sbjct: 412 LAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLE 471
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
M+K P+LF QPDLLH+LVT ++P+ L VPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 472 TVMKKLAPELFISQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFN 531
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
GFN AEAVN VDWL G+Q VE Y HR SHD+++
Sbjct: 532 QGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMI 573
Score = 116 (45.9 bits), Expect = 5.3e-83, Sum P(4) = 5.3e-83
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 468 KEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCS 527
+E ++KL ++M+ + ER+C C +SA C C P CL H CS
Sbjct: 606 RETVRKL-GVIDSERMDFELLPDDERQCVKCKTTCFMSALSCCCKPGLLVCLHHVQELCS 664
Query: 528 CEIDHRFVI-LRYSTDELNTLVEALEGGLDALKELA 562
C +++ + RY+ D+L ++ AL+ ++ E A
Sbjct: 665 CP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA 699
Score = 48 (22.0 bits), Expect = 5.3e-83, Sum P(4) = 5.3e-83
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 62 CRIVPPSSWTPPCPLKAKNIWENAKFSTRIQQIDLLQ 98
C++ P W PP A ++ + F+ RIQ+++ L+
Sbjct: 2 CKVRDPHDWQPPF---ACDV-DKLHFTPRIQRLNELE 34
Score = 42 (19.8 bits), Expect = 5.3e-83, Sum P(4) = 5.3e-83
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 564 KNFKWADCSDTDGGLVKMDMESEVFPMDCCEQKESSSSSPRVENIVEGNGPCCSRSHVSS 623
K K + DTD ++ + E+ P + S SSS E+ + + C + S +
Sbjct: 1376 KRIKLSHPKDTDSLKLERECSYELAPSADTQSLPSDSSSSEQEDSEDEDAICPAVSCLQP 1435
Query: 624 E 624
E
Sbjct: 1436 E 1436
Score = 37 (18.1 bits), Expect = 1.8e-82, Sum P(4) = 1.8e-82
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 689 SHGKEAIENLKAHLSACYQEKVLCSGTVKEQDTMQVRSDCNSSNSHKDPNKDQPSCSRV 747
SH K+ ++LK Y+ DT + SD +SS+ +D + C V
Sbjct: 1381 SHPKDT-DSLKLERECSYE-------LAPSADTQSLPSD-SSSSEQEDSEDEDAICPAV 1430
>UNIPROTKB|D4A3B4 [details] [associations]
symbol:D4A3B4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00949627
Ensembl:ENSRNOT00000067288 ArrayExpress:D4A3B4 Uniprot:D4A3B4
Length = 1490
Score = 711 (255.3 bits), Expect = 5.9e-83, Sum P(2) = 5.9e-83
Identities = 157/381 (41%), Positives = 218/381 (57%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + TL+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 340 EAFGFEQATREYTLQSFGEMADSFKADYFNMP-----------VH--MVPTEL-VEKEFW 385
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLG-TESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + S + ++YA SGWNLN +P L SV
Sbjct: 386 RLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSV 445
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L +DISG+ VPWLYVGM FS+FCWH+EDH YS+NYLHWG+PK WYGVP A LE
Sbjct: 446 LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE 505
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
+ M+K P+LF+ QPDLLH+LVT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN
Sbjct: 506 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 565
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ 437
G+N AEAVN DWL G+Q +E Y R SH++L+ K L+
Sbjct: 566 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 625
Query: 438 KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECF- 496
K ++ + +L K + + K++GL+ P +L + ++ + CF
Sbjct: 626 HKEMFIMVQEERRLRKALLEKGLS---EAKRQGLKTEPKDVRLCINCVTTEMMSANPCFV 682
Query: 497 SCFYDLHLSAAG--CKCSPDR 515
F + +S CKCS R
Sbjct: 683 KPFVFILISHXNGLCKCSSSR 703
Score = 162 (62.1 bits), Expect = 5.9e-83, Sum P(2) = 5.9e-83
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 100 (40.3 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 37/156 (23%), Positives = 69/156 (44%)
Query: 465 QMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANI 524
+++K L+K S K Q ++ + K R C +C +SA C P F + H N
Sbjct: 638 RLRKALLEKGLSEAKRQGLKTE--PKDVRLCINCVTTEMMSANPCFVKPFVFILISHXNG 695
Query: 525 FCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCSDTDGGLVKMDME 584
C C +++ RY+ DEL ++ L+ ++ A+K + A + + G + E
Sbjct: 696 LCKCSSSRQYLRSRYTLDELPAMLHKLKVRAESFDTWATK-VRVA--LEVEDGRKRSLEE 752
Query: 585 SEVFPMDCCEQK-ESSSSSPRVENIVEGNGPCCSRS 619
+ E++ +S R++N + C SR+
Sbjct: 753 LRALESEARERRFPNSELLQRLKNCLSEAEACVSRA 788
Score = 52 (23.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 559 KELASKNFKWADCSDTDGGLVKMD----MESEVFPMDCCEQKESSSSSP 603
K L K+ + A+C+ T GG ++ MES P E KE S SP
Sbjct: 214 KNLRKKDKEGAECAPTVGGKEELGGEWKMES-ASPKTFLEGKEELSHSP 261
>ASPGD|ASPL0000010243 [details] [associations]
symbol:AN8211 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0034630
"RITS complex localization" evidence=IEA] [GO:0031507
"heterochromatin assembly" evidence=IEA] [GO:0051572 "negative
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:BN001302 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 OrthoDB:EOG44N21B KO:K11446
EMBL:AACD01000143 RefSeq:XP_681480.1 ProteinModelPortal:Q5AU19
EnsemblFungi:CADANIAT00004258 GeneID:2869040 KEGG:ani:AN8211.2
HOGENOM:HOG000160061 OMA:HFGATKT Uniprot:Q5AU19
Length = 1717
Score = 695 (249.7 bits), Expect = 6.8e-82, Sum P(3) = 6.8e-82
Identities = 144/301 (47%), Positives = 186/301 (61%)
Query: 141 KFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYWRI 200
+FGF+ G +L+ FQ+ A NFK+ YF SK + D + R S D+E E+WR+
Sbjct: 507 EFGFEEGGVYSLKQFQEKANNFKKNYFA---SK--MPFDPVLNTRRRESEDDVEREFWRL 561
Query: 201 IERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAF 260
+E T+ VEV YGAD+ + SGFP + LD Y+ WNLNNLP S+
Sbjct: 562 VESLTETVEVEYGADIHSTTHGSGFPTVE----RNPLDPYSKDPWNLNNLPFHGESLFRH 617
Query: 261 EGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAM 320
SDISG+ VPW+YVGMCFS+FCWH EDH+ YS NY H+G K WYG+PG+ A E+AM
Sbjct: 618 IKSDISGMTVPWVYVGMCFSTFCWHNEDHYAYSANYQHFGATKTWYGIPGADAEAFEEAM 677
Query: 321 RKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGF 380
R+ +P+LFE QPDLL +LVT + P L+ GV VY + Q +G+FV+TFP+AYH+GFN GF
Sbjct: 678 RQAVPELFEGQPDLLFQLVTLMPPDQLRKAGVNVYALDQRAGQFVITFPQAYHAGFNHGF 737
Query: 381 NCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSV--QAAIK-ALWELSVLQ 437
N EAVN APVDW G VE R SHD+LLF + +I A W LQ
Sbjct: 738 NFNEAVNFAPVDWEPFGAAGVERLQAFRRHPCFSHDELLFTAAARDTSISTAKWLAPALQ 797
Query: 438 K 438
+
Sbjct: 798 R 798
Score = 153 (58.9 bits), Expect = 6.8e-82, Sum P(3) = 6.8e-82
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 20 DPAEACRPI-IDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKA 78
+P RP + EAP F PT EEF D YI KI + + +GICRI+PP +W P +
Sbjct: 62 EPTSRVRPHGLQEAPTFRPTEEEFRDPEAYIRKIAPEGKKYGICRIIPPENWQPTFAIDT 121
Query: 79 KNIWENAKFSTRIQQIDLLQNREP 102
E F TR Q+++ ++ P
Sbjct: 122 ----EKFHFKTRRQELNSVEGGMP 141
Score = 44 (20.5 bits), Expect = 6.8e-82, Sum P(3) = 6.8e-82
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 666 EVCIDL-NMDVIPDGNESKLLLSDSHGKEAIENL 698
+V DL N D P+ + + ++H EA+E L
Sbjct: 1646 DVFADLTNQDADPEPEQDPEPMENTHANEALELL 1679
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 715 (256.8 bits), Expect = 2.6e-79, Sum P(2) = 2.6e-79
Identities = 143/282 (50%), Positives = 181/282 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ D TL F + A FK YF M H + P+ + +E E+W
Sbjct: 208 EAFGFEQAARDYTLRTFGEMADAFKSDYFNMP-----------VH--MVPTEL-VEKEFW 253
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + + + ++Y SGWNLNN+P + SV
Sbjct: 254 RLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSV 313
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA +DI G+ +PWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVPG A LE
Sbjct: 314 LAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLE 373
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
M+K P+LF QPDLLH+LVT ++P+ L VPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 374 NVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFN 433
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
GFN AEAVN VDWL G+Q VE Y HR SHD+++
Sbjct: 434 QGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMI 475
Score = 119 (46.9 bits), Expect = 2.6e-79, Sum P(2) = 2.6e-79
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 468 KEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCS 527
+E ++KL ++M+ + ER+C C +SA C C P CL H CS
Sbjct: 508 RETVRKL-GVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCS 566
Query: 528 CEIDHRFVI-LRYSTDELNTLVEALEGGLDALKELA 562
C +++ + RY+ D+L ++ AL+ ++ E A
Sbjct: 567 CP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA 601
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 715 (256.8 bits), Expect = 5.6e-79, Sum P(2) = 5.6e-79
Identities = 143/282 (50%), Positives = 181/282 (64%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ D TL F + A FK YF M H + P+ + +E E+W
Sbjct: 298 EAFGFEQAARDYTLRTFGEMADAFKSDYFNMP-----------VH--MVPTEL-VEKEFW 343
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLPRLPGSV 257
R++ ++V V YGAD+ + F SGFP + + + ++Y SGWNLNN+P + SV
Sbjct: 344 RLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSV 403
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
LA +DI G+ +PWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVPG A LE
Sbjct: 404 LAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLE 463
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
M+K P+LF QPDLLH+LVT ++P+ L VPVY Q +GEFV+TFPRAYHSGFN
Sbjct: 464 NVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFN 523
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
GFN AEAVN VDWL G+Q VE Y HR SHD+++
Sbjct: 524 QGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMI 565
Score = 120 (47.3 bits), Expect = 5.6e-79, Sum P(2) = 5.6e-79
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 468 KEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCS 527
+E ++KL ++M+ + ER+C C +SA C C P CL H CS
Sbjct: 598 RETVRKL-GVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVKELCS 656
Query: 528 CEIDHRFVI-LRYSTDELNTLVEALEGGLDALKELA 562
C +++ + RY+ D+L ++ AL+ ++ E A
Sbjct: 657 CP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA 691
>UNIPROTKB|G4N2P7 [details] [associations]
symbol:MGG_04878 "Lid2 complex component lid2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00184
SMART:SM00249 SMART:SM00501 SMART:SM00558 GO:GO:0005634
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 RefSeq:XP_003712359.1 EnsemblFungi:MGG_04878T0
GeneID:2675627 KEGG:mgr:MGG_04878 Uniprot:G4N2P7
Length = 1755
Score = 666 (239.5 bits), Expect = 1.0e-78, Sum P(3) = 1.0e-78
Identities = 157/395 (39%), Positives = 211/395 (53%)
Query: 139 DEKFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
D +FGF+ G +L+ FQ+ A +FK+ YF + K V H+ + D+E E+W
Sbjct: 511 DGRFGFEEGGLYSLKQFQERAADFKQSYF---EKKMPVDPQLNCHRPVTED--DVEREFW 565
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVL 258
R++ + VEV YGAD+ SGFP A D D Y+ WNLN LP P S+
Sbjct: 566 RLVSSIEETVEVEYGADIHCTTHGSGFPTAEK---NPD-DPYSTDPWNLNILPLHPESLF 621
Query: 259 AFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEK 318
+ SDISG+ VPW+YVGM FS+FCWH EDH+ YS NY H+G K WYG+PG A E
Sbjct: 622 RYIKSDISGMTVPWVYVGMIFSTFCWHNEDHYSYSANYQHFGATKTWYGIPGEDAEKFEA 681
Query: 319 AMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNC 378
AMR+ +P+LF QPDLL +LVT L P LK GV VY + Q +G+FV+TFP+AYH+GFN
Sbjct: 682 AMREAIPELFATQPDLLFQLVTLLPPEQLKKAGVRVYAIDQRAGQFVITFPQAYHAGFNH 741
Query: 379 GFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQK 438
GFN EAVN AP DW G VE + R+ SHD+LL+ + + + +
Sbjct: 742 GFNFNEAVNFAPSDWEPFGLAGVERLQQFRRQPCFSHDELLWTAAEGIASGGLTIQTAKW 801
Query: 439 KTPGNRKW--KDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQ-KMEIDFDLKTER-E 494
P + ++ + +TK K Q S L K+E D D+ E +
Sbjct: 802 LAPALERIHSRELAQRQAFVTKH-KDLAQHSCAITGGEDSSCLLSFKVE-DEDVPEEEYQ 859
Query: 495 CFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCE 529
C C +LS C S + CL HA C+
Sbjct: 860 CGYCKVYTYLSRFKCLKS-GQVLCLLHAGHHACCD 893
Score = 160 (61.4 bits), Expect = 1.0e-78, Sum P(3) = 1.0e-78
Identities = 27/70 (38%), Positives = 45/70 (64%)
Query: 29 IDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFS 88
++EAP +YPT EEF++ + Y+ KI +A +GIC+IVPP +W PP + + F
Sbjct: 92 VEEAPTYYPTAEEFKEPMAYMRKIAPEARKYGICKIVPPDTWNPPFAIDTQKF----HFR 147
Query: 89 TRIQQIDLLQ 98
TR Q+++ ++
Sbjct: 148 TRKQELNSVE 157
Score = 41 (19.5 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 171 DSKEDVKSDGFEHKRLEP-SVVDIEGEYWRIIERPT 205
DSKED + KR++ +V + G + + RP+
Sbjct: 413 DSKEDADGNSRRSKRIKKENVPTVAGSHMTLF-RPS 447
Score = 37 (18.1 bits), Expect = 1.0e-78, Sum P(3) = 1.0e-78
Identities = 10/47 (21%), Positives = 21/47 (44%)
Query: 723 QVRSDCNSSNSHKDPNKDQPSCSRVIEGTCSFDVKKLFGVDLSLPHQ 769
Q+ + +H P + P + T F ++KL G ++ L ++
Sbjct: 1417 QIIDNAQDFRNHIGPYCNNPMATASEVETQRFYLRKLEGAEILLAYE 1463
>WB|WBGene00004319 [details] [associations]
symbol:rbr-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone
H3-K4 demethylation" evidence=IMP;IDA] [GO:0040028 "regulation of
vulval development" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0008340 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:Z69385 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 HSSP:Q14839
PIR:T27924 RefSeq:NP_502032.2 ProteinModelPortal:Q23541 SMR:Q23541
STRING:Q23541 PaxDb:Q23541 EnsemblMetazoa:ZK593.4 GeneID:177985
KEGG:cel:CELE_ZK593.4 UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4
HOGENOM:HOG000113216 InParanoid:Q23541 OMA:KANQLLF NextBio:899238
Uniprot:Q23541
Length = 1477
Score = 687 (246.9 bits), Expect = 1.0e-78, Sum P(2) = 1.0e-78
Identities = 159/416 (38%), Positives = 225/416 (54%)
Query: 142 FGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYWRI 200
+GF + + L F ++A +K YFG+ D + V D +E +W+
Sbjct: 380 WGFYDADTEYNLNSFTEFANKWKCDYFGVKDVSQ-VSCDA------------VERSFWKN 426
Query: 201 IERPTDEVEVYYGADLETGAFASGFPKASSLGTESDL---DQYAMSGWNLNNLPRLPGSV 257
+ + V V YGADL T SGFP+ T DL QYA WNLNN+P L SV
Sbjct: 427 VISHENPVSVKYGADLITSRVGSGFPRKEDKHTGPDLKLKQQYASHAWNLNNMPVLRESV 486
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L+ + ISG++VPW+YVGMCFS+FCWH EDH YS+NY H+G+ KIWYGV G A E
Sbjct: 487 LSHFNTGISGMMVPWVYVGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYGVGGEDAEKFE 546
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
A++K P L Q DL H + T +P +L++ GVP++ V Q++GEFV+TFPRAYH+GFN
Sbjct: 547 DALKKIAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAGFN 606
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ 437
G N AEAVN AP+DWL+ G++ VE YS R SHD+LLF V+A K +S+
Sbjct: 607 EGLNFAEAVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSLAT 666
Query: 438 KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFS 497
+ K ++ + + R QM++ +K+P +R C
Sbjct: 667 HEELIRIYEKQKMLRELLARLGVSNR-QMQQVMFEKIPD--------------EQRSCRF 711
Query: 498 CFYDLHLSAAGCKCSPDRFACLKHANIFC-SCEI-DHRFVILRYSTDELNTLVEAL 551
C L + A C + C++H + C SC D+R+ R+ D+LN + + L
Sbjct: 712 CKTTLFMCALVCN-KHKKMTCVEHHDHLCNSCTTKDYRYQY-RFELDQLNNMCDEL 765
Score = 146 (56.5 bits), Expect = 1.0e-78, Sum P(2) = 1.0e-78
Identities = 24/42 (57%), Positives = 34/42 (80%)
Query: 32 APVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPP 73
AP++YPT EEF D + Y+AKIR +AE FG+ +IVPP+++ PP
Sbjct: 56 APIYYPTEEEFSDPIEYVAKIRHEAEKFGVVKIVPPANFKPP 97
Score = 58 (25.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 25/114 (21%), Positives = 50/114 (43%)
Query: 643 SVNSHNEGNDETQVMNKKAKVKHEVC---IDLNMDVIPDGNESKLLLSDSHGKEAIENLK 699
++ + +E +DE + + K + H I++ D +G E + +S G+ +N K
Sbjct: 221 AMKNDDESDDEMEELKHKYQHHHGTMRTEIEVPNDKTTEGGEDECPVSMQSGRRRSKNKK 280
Query: 700 AHLSACYQEKVLCSGTVKEQDTMQVRSDCNSSNSHKDPNKDQPSCSRVIEGTCS 753
A S K L GT ++++ + R N + D + D+ +V C+
Sbjct: 281 ASSS----RKTL--GTSSKKNSTRGRK--NKKKAEGDDDDDEDPMDQVFCVACN 326
Score = 44 (20.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 648 NEGNDETQVM----NKKAKVKHEVCIDLNMDVIPDG 679
NEG DE ++ + +H C D +D +P+G
Sbjct: 326 NEGKDEDLLLLCDIDGCNNGRHTYCCDPVLDEVPEG 361
Score = 37 (18.1 bits), Expect = 3.2e-67, Sum P(2) = 3.2e-67
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 25 CRPIIDEAP 33
C P++DE P
Sbjct: 351 CDPVLDEVP 359
>UNIPROTKB|Q23541 [details] [associations]
symbol:rbr-2 "Lysine-specific demethylase rbr-2"
species:6239 "Caenorhabditis elegans" [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IDA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0008340
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:Z69385
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0034647
KO:K11446 HSSP:Q14839 PIR:T27924 RefSeq:NP_502032.2
ProteinModelPortal:Q23541 SMR:Q23541 STRING:Q23541 PaxDb:Q23541
EnsemblMetazoa:ZK593.4 GeneID:177985 KEGG:cel:CELE_ZK593.4
UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4 HOGENOM:HOG000113216
InParanoid:Q23541 OMA:KANQLLF NextBio:899238 Uniprot:Q23541
Length = 1477
Score = 687 (246.9 bits), Expect = 1.0e-78, Sum P(2) = 1.0e-78
Identities = 159/416 (38%), Positives = 225/416 (54%)
Query: 142 FGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYWRI 200
+GF + + L F ++A +K YFG+ D + V D +E +W+
Sbjct: 380 WGFYDADTEYNLNSFTEFANKWKCDYFGVKDVSQ-VSCDA------------VERSFWKN 426
Query: 201 IERPTDEVEVYYGADLETGAFASGFPKASSLGTESDL---DQYAMSGWNLNNLPRLPGSV 257
+ + V V YGADL T SGFP+ T DL QYA WNLNN+P L SV
Sbjct: 427 VISHENPVSVKYGADLITSRVGSGFPRKEDKHTGPDLKLKQQYASHAWNLNNMPVLRESV 486
Query: 258 LAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLE 317
L+ + ISG++VPW+YVGMCFS+FCWH EDH YS+NY H+G+ KIWYGV G A E
Sbjct: 487 LSHFNTGISGMMVPWVYVGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYGVGGEDAEKFE 546
Query: 318 KAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
A++K P L Q DL H + T +P +L++ GVP++ V Q++GEFV+TFPRAYH+GFN
Sbjct: 547 DALKKIAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAGFN 606
Query: 378 CGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ 437
G N AEAVN AP+DWL+ G++ VE YS R SHD+LLF V+A K +S+
Sbjct: 607 EGLNFAEAVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSLAT 666
Query: 438 KKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFS 497
+ K ++ + + R QM++ +K+P +R C
Sbjct: 667 HEELIRIYEKQKMLRELLARLGVSNR-QMQQVMFEKIPD--------------EQRSCRF 711
Query: 498 CFYDLHLSAAGCKCSPDRFACLKHANIFC-SCEI-DHRFVILRYSTDELNTLVEAL 551
C L + A C + C++H + C SC D+R+ R+ D+LN + + L
Sbjct: 712 CKTTLFMCALVCN-KHKKMTCVEHHDHLCNSCTTKDYRYQY-RFELDQLNNMCDEL 765
Score = 146 (56.5 bits), Expect = 1.0e-78, Sum P(2) = 1.0e-78
Identities = 24/42 (57%), Positives = 34/42 (80%)
Query: 32 APVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPP 73
AP++YPT EEF D + Y+AKIR +AE FG+ +IVPP+++ PP
Sbjct: 56 APIYYPTEEEFSDPIEYVAKIRHEAEKFGVVKIVPPANFKPP 97
Score = 58 (25.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 25/114 (21%), Positives = 50/114 (43%)
Query: 643 SVNSHNEGNDETQVMNKKAKVKHEVC---IDLNMDVIPDGNESKLLLSDSHGKEAIENLK 699
++ + +E +DE + + K + H I++ D +G E + +S G+ +N K
Sbjct: 221 AMKNDDESDDEMEELKHKYQHHHGTMRTEIEVPNDKTTEGGEDECPVSMQSGRRRSKNKK 280
Query: 700 AHLSACYQEKVLCSGTVKEQDTMQVRSDCNSSNSHKDPNKDQPSCSRVIEGTCS 753
A S K L GT ++++ + R N + D + D+ +V C+
Sbjct: 281 ASSS----RKTL--GTSSKKNSTRGRK--NKKKAEGDDDDDEDPMDQVFCVACN 326
Score = 44 (20.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 648 NEGNDETQVM----NKKAKVKHEVCIDLNMDVIPDG 679
NEG DE ++ + +H C D +D +P+G
Sbjct: 326 NEGKDEDLLLLCDIDGCNNGRHTYCCDPVLDEVPEG 361
Score = 37 (18.1 bits), Expect = 3.2e-67, Sum P(2) = 3.2e-67
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 25 CRPIIDEAP 33
C P++DE P
Sbjct: 351 CDPVLDEVP 359
>UNIPROTKB|E7EV89 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS51184
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0016706
EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A
IPI:IPI00909864 ProteinModelPortal:E7EV89 SMR:E7EV89 PRIDE:E7EV89
Ensembl:ENST00000544760 ArrayExpress:E7EV89 Bgee:E7EV89
Uniprot:E7EV89
Length = 715
Score = 691 (248.3 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 170/463 (36%), Positives = 244/463 (52%)
Query: 239 QYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLH 298
+YA+SGWNLNN+P L SVLA DISG+ VPWLYVGMCFSSFCWH+EDH YS+NYLH
Sbjct: 56 EYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLH 115
Query: 299 WGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVV 358
WG+PK WYGVP A LE+ MR+ P+LFE QPDLLH+LVT ++P+VL GVPVY
Sbjct: 116 WGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTN 175
Query: 359 QHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKL 418
Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL G+Q V Y R SH++L
Sbjct: 176 QCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEEL 235
Query: 419 LFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYF 478
+F AA ++ + C + ++T+ +TR++ + L S
Sbjct: 236 IFK--MAADPECLDVGLAAM----------VCKELTLMTEE-ETRLRESVVQMGVLMSEE 282
Query: 479 KLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILR 538
++ ++ D ER+C +C LSA C C+P+R CL H C C + + + R
Sbjct: 283 EVFELVPD----DERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCPCPMQKKCLRYR 338
Query: 539 YSTDELNTLVEALEGGLDALKELASKNFKWADCSDTDGGLVKMDM-ESEVFPMDCCEQKE 597
Y ++L +L+ ++ + S+ + + K D+ E V D ++K
Sbjct: 339 YPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANFNH----KKDLIELRVMLEDAEDRKY 394
Query: 598 SSSSSPR-VENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEG------ 650
+ R + + V+ C S + + Q Q SG + + ++V
Sbjct: 395 PENDLFRKLRDAVKEAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFS 454
Query: 651 -----NDETQVMNKKAKVK--HEVCIDLNMDVIPDGNESKLLL 686
+ QV N V+ HE + MD PD ++ ++L+
Sbjct: 455 LPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLI 497
Score = 109 (43.4 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSW 70
E PVF P+ EEF D L +I +IR AE GIC+I PP +
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKEY 57
>UNIPROTKB|I3L8V3 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0016706 GeneTree:ENSGT00530000063118 EMBL:FP102715
Ensembl:ENSSSCT00000023353 Uniprot:I3L8V3
Length = 583
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 187/510 (36%), Positives = 270/510 (52%)
Query: 193 IEGEYWRIIERPTDEVEVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSGWNLNNLP 251
+E E+WR++ ++V V YGAD+ + F SGFP K + ++YA+SGWNLNN+P
Sbjct: 7 VEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNNMP 66
Query: 252 RLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGS 311
L SVLA DISG+ VPWLYVGMCFSSFCWH+EDH YS+NYLHWG+PK WYGVP
Sbjct: 67 VLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSH 126
Query: 312 HASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRA 371
A LE+ MR+ P+LFE QPDLLH+LVT ++P+VL GVPVY Q +GEFV+TFPRA
Sbjct: 127 AAEQLEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRA 186
Query: 372 YHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALW 431
YHSGFN G+N AEAVN DWL G+Q V Y R SH++L+F AA
Sbjct: 187 YHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECL 244
Query: 432 ELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKT 491
++ + C + ++T+ +TR++ + L S ++ ++ D
Sbjct: 245 DVGLAAM----------VCKELTLMTEE-ETRLRESVVQMGVLMSEEEVFELVPD----D 289
Query: 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
ER+C +C LSA C C+P+R CL H C C + + + RY ++L +L+ +
Sbjct: 290 ERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGV 349
Query: 552 EGGLDALKELASKNFKWADCSDTDGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIV 609
+ + S+ + S K D+ E V D ++K + R + + V
Sbjct: 350 KVRAQSYDTWVSRVTEALSASFNH----KKDLIELRVMLEDAEDRKYPENDLFRQLRDAV 405
Query: 610 EGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEG-----------NDETQVMN 658
+ C S + + Q Q SG + + ++V + QV N
Sbjct: 406 KEAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKN 465
Query: 659 KKAKVK--HEVCIDLNMDVIPDGNESKLLL 686
V+ HE + MD PD ++ ++L+
Sbjct: 466 LLDDVEEFHERAQEAMMDETPDSSKLQMLI 495
>TAIR|locus:2031290 [details] [associations]
symbol:AT1G63490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG327026 KO:K11446
EMBL:AY039958 EMBL:BT011572 IPI:IPI00545053 RefSeq:NP_564814.1
UniGene:At.22811 ProteinModelPortal:Q94BQ7 SMR:Q94BQ7 PRIDE:Q94BQ7
EnsemblPlants:AT1G63490.1 GeneID:842655 KEGG:ath:AT1G63490
TAIR:At1g63490 HOGENOM:HOG000084215 InParanoid:Q94BQ7 OMA:WAGSEMD
PhylomeDB:Q94BQ7 ProtClustDB:CLSN2689007 ArrayExpress:Q94BQ7
Genevestigator:Q94BQ7 Uniprot:Q94BQ7
Length = 1116
Score = 743 (266.6 bits), Expect = 3.8e-75, Sum P(2) = 3.8e-75
Identities = 157/351 (44%), Positives = 207/351 (58%)
Query: 212 YGADLETGAFASGFPKASSLGTES---DL-DQYAMSGWNLNNLPRLPGSVLAFEGSDISG 267
YG DL+T + SGFP+ ES D+ D+Y S WNLNN+P+L GS+L +I+G
Sbjct: 2 YGNDLDTSVYGSGFPRIGDQRPESVEADIWDEYCGSPWNLNNMPKLKGSMLQAIRHNING 61
Query: 268 VLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDL 327
V VPWLY+GM FSSFCWH EDH YS+NYLHWG+ K WYG+PGS AS EK MRK LPDL
Sbjct: 62 VTVPWLYLGMLFSSFCWHFEDHCFYSVNYLHWGEAKCWYGIPGSAASAFEKVMRKTLPDL 121
Query: 328 FEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVN 387
F+ QPDLL +LVT LSP+VL+ VPVY V+Q G FV+TFP+++H+GFN G NCAEAVN
Sbjct: 122 FDAQPDLLFQLVTMLSPTVLQENKVPVYTVLQEPGNFVITFPKSFHAGFNFGLNCAEAVN 181
Query: 388 VAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWK 447
A DWL +G ELY + + +SH++LL V+ K N +
Sbjct: 182 FATADWLPYGGSGAELYRLYRKPSVISHEELL--------------CVVAKGNCCNNEGS 227
Query: 448 DACGKD--GVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLS 505
K+ + +K R Q+ K G+ + F + + ++ + C C LHLS
Sbjct: 228 IHLKKELLRIYSKEKTWREQLWKSGILRSSPMF-VPECADSVGIEEDPTCIICQQFLHLS 286
Query: 506 AAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALE--GG 554
A C C P FACL+H C CE + RY+ EL+ +V+ +E GG
Sbjct: 287 AIVCNCRPSVFACLEHWKHLCECEPTKLRLEYRYTLAELDMMVQEVEKFGG 337
Score = 43 (20.2 bits), Expect = 3.8e-75, Sum P(2) = 3.8e-75
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 592 CCEQKESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSE 629
CC+ SSSSP E + + P S H+ + + +
Sbjct: 902 CCKTITLSSSSPTSELLEDVGKP--SLQHIQQHLKEGQ 937
>DICTYBASE|DDB_G0268778 [details] [associations]
symbol:rbbB "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00558 dictyBase:DDB_G0268778 GO:GO:0005634
GenomeReviews:CM000150_GR GO:GO:0003677 GO:GO:0003700
EMBL:AAFI02000004 GO:GO:0006366 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 RefSeq:XP_646956.1 ProteinModelPortal:Q55ER4
EnsemblProtists:DDB0220639 GeneID:8616646 KEGG:ddi:DDB_G0268778
InParanoid:Q55ER4 OMA:ENEFWRI Uniprot:Q55ER4
Length = 1198
Score = 612 (220.5 bits), Expect = 4.9e-73, Sum P(4) = 4.9e-73
Identities = 127/317 (40%), Positives = 187/317 (58%)
Query: 193 IEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPR 252
+E E+WRI+E + V+V+YG+DL+ SGF + T + +++ WNLN +P+
Sbjct: 679 VENEFWRIVENGDENVQVHYGSDLDVTTHGSGFSRT----TNTQPNEH----WNLNQMPK 730
Query: 253 LPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSH 312
+ S+ + I+GV P +YVGM FSSFCWH ED++LYS+NYLH G K WYGVPGS
Sbjct: 731 MEESLFSHLTETIAGVTDPMMYVGMLFSSFCWHNEDNYLYSINYLHKGTYKTWYGVPGSC 790
Query: 313 ASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAY 372
+ EK M+ +P+LFE+QP+LL+ L+T +SP V K VP+Y +Q GE+V+TFP+AY
Sbjct: 791 SDQFEKVMKNLVPELFEKQPNLLYLLITMISPDVFKRRHVPIYKCLQGPGEYVITFPQAY 850
Query: 373 HSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWE 432
H+GF+ GF AEAVN AP DW+ G ++E Y E HR + SHD+LL+ + + +
Sbjct: 851 HAGFSHGFTIAEAVNFAPPDWIPFGSSSIERYQETHRSSVFSHDQLLYTIANRSPSS--D 908
Query: 433 LSVLQKKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTE 492
LSV K K K+ ++ +L + ++ ++ Q++ + LQ
Sbjct: 909 LSVWLSKEFQKIKSKENSLRNQLLKRNPTLIIEKSQKSTQEILNNEPLQ----------- 957
Query: 493 RECFSCFYDLHLSAAGC 509
CF C YD LS C
Sbjct: 958 --CFVCKYDCFLSFIQC 972
Score = 153 (58.9 bits), Expect = 4.9e-73, Sum P(4) = 4.9e-73
Identities = 36/73 (49%), Positives = 44/73 (60%)
Query: 29 IDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIW-ENAKF 87
I EAPVFYPT+EEF+ L YI IR AE +GIC+IVPP KNI + KF
Sbjct: 268 IPEAPVFYPTIEEFKSPLRYIESIRPIAEKYGICKIVPPFK----SDSITKNIDPKKFKF 323
Query: 88 STRIQQIDLLQNR 100
T++Q I L+ R
Sbjct: 324 KTKVQNIHQLKRR 336
Score = 118 (46.6 bits), Expect = 4.1e-13, Sum P(4) = 4.1e-13
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 140 EKFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYWR 199
++FGF G +LE F+ A NF + +F D D P+ V E E+WR
Sbjct: 642 QEFGFYEGNTYSLEEFEILAANFSKKWFP--DGNND------------PNTV--ENEFWR 685
Query: 200 IIERPTDEVEVYYGADLETGAFASGFPKASS 230
I+E + V+V+YG+DL+ SGF + ++
Sbjct: 686 IVENGDENVQVHYGSDLDVTTHGSGFSRTTN 716
Score = 46 (21.3 bits), Expect = 9.5e-06, Sum P(4) = 9.5e-06
Identities = 7/27 (25%), Positives = 18/27 (66%)
Query: 717 KEQDTMQVRSDCNSSNSHKDPNKDQPS 743
KE+ ++++ N++N++ D +D+ S
Sbjct: 471 KEESLNNIKNNNNNNNNNSDDERDEGS 497
Score = 44 (20.5 bits), Expect = 4.9e-73, Sum P(4) = 4.9e-73
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 769 QQSKLPLVDFLKTDTINGSNVRTSVTDQRFQKKLETCVEPIN 810
QQ + P+ T T N +N + Q+ Q+ ++PI+
Sbjct: 1102 QQQQQPIQP-TSTSTSNSNNNNNIIQQQQQQQSTPLTIKPIS 1142
Score = 42 (19.8 bits), Expect = 4.9e-73, Sum P(4) = 4.9e-73
Identities = 8/37 (21%), Positives = 19/37 (51%)
Query: 515 RFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 551
+ CL H C C + + +I +S ++L+ + ++
Sbjct: 1034 KICCLSHFEDLCDC--NKKKLISIFSIEDLDKTISSV 1068
Score = 42 (19.8 bits), Expect = 4.9e-73, Sum P(4) = 4.9e-73
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 645 NSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIPDGNESKLL 685
N++N N+ NK K+ C+ + + + D N+ KL+
Sbjct: 1017 NNNNNNNNNNNSNNKTIKI---CCLS-HFEDLCDCNKKKLI 1053
Score = 41 (19.5 bits), Expect = 6.3e-73, Sum P(4) = 6.3e-73
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 729 NSSNSHKDPNKD-QPSCSRVIEGTCSFDVKKLFGV 762
N++N++ NK + C E C + KKL +
Sbjct: 1021 NNNNNNNSNNKTIKICCLSHFEDLCDCNKKKLISI 1055
Score = 40 (19.1 bits), Expect = 1.3e-72, Sum P(4) = 1.3e-72
Identities = 7/50 (14%), Positives = 25/50 (50%)
Query: 594 EQKESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVS 643
+Q++ + + ++ S S+ ++ ++Q + Q+ ++ L+ +S
Sbjct: 1093 QQQQQQQQQQQQQQPIQPTSTSTSNSNNNNNIIQQQQQQQSTPLTIKPIS 1142
Score = 39 (18.8 bits), Expect = 9.5e-06, Sum P(4) = 9.5e-06
Identities = 8/29 (27%), Positives = 19/29 (65%)
Query: 585 SEVFPMDCCEQKESSSSSPRVENIVEGNG 613
+E+F D CE + +++P +E++ + +G
Sbjct: 341 NELFVSDLCEFLDKKTNTP-LESLPKYDG 368
>POMBASE|SPAC1002.05c [details] [associations]
symbol:jmj2 "histone demethylase Jmj2" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=ISM] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016577 "histone demethylation"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IMP;IDA] [GO:0034648 "histone
demethylase activity (H3-dimethyl-K4 specific)" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 PomBase:SPAC1002.05c
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0008270
GO:GO:0006338 GO:GO:0000122 GO:GO:0000790 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0051864
eggNOG:NOG327026 GO:GO:0034647 OMA:RNISGMT OrthoDB:EOG44N21B
RefSeq:NP_593492.1 ProteinModelPortal:Q9US53
EnsemblFungi:SPAC1002.05c.1 GeneID:2543275 KEGG:spo:SPAC1002.05c
NextBio:20804296 Uniprot:Q9US53
Length = 715
Score = 560 (202.2 bits), Expect = 6.8e-73, Sum P(3) = 6.8e-73
Identities = 105/230 (45%), Positives = 148/230 (64%)
Query: 193 IEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPR 252
+E EYW++++ +EV YGADL T S FP SL ++ ++ Y+ WNLN +
Sbjct: 380 VEKEYWKLVKDNNTSLEVEYGADLSTLDQGSAFP---SLA-KNPVNPYSKDTWNLNVIAS 435
Query: 253 LPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSH 312
GS+L++ + +SG+ PWLYVGMCFS+FCWHVED++ YS+NY H+GD K+WYG+PG
Sbjct: 436 TNGSLLSYIDNPVSGITCPWLYVGMCFSTFCWHVEDNYTYSVNYQHYGDTKLWYGIPGDQ 495
Query: 313 ASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAY 372
A E+A PDL ++Q DLL++L T ++P L+ GV VY + Q EFV+TFP+++
Sbjct: 496 AERFERAALDIAPDLVKKQKDLLYQLATMINPDELQKRGVDVYFIDQGPNEFVITFPKSF 555
Query: 373 HSGFNCGFNCAEAVNVAPVDWLAHG--QQAVELYSEQHRKTSLSHDKLLF 420
H+G N GFN EAVN AP DWL +G V Y + LSHD L++
Sbjct: 556 HAGINHGFNINEAVNFAPKDWLLNGFSLNGVLKYQSLLKPPVLSHDMLVY 605
Score = 154 (59.3 bits), Expect = 6.8e-73, Sum P(3) = 6.8e-73
Identities = 31/69 (44%), Positives = 40/69 (57%)
Query: 32 APVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTRI 91
APVFYP EEF+D++GYI KI E +GI +IVPP+ W PP L F TR
Sbjct: 60 APVFYPDKEEFQDSIGYINKIAPIGEKYGIIKIVPPAGWNPPMQLDMNKF----SFRTRR 115
Query: 92 QQIDLLQNR 100
Q + ++ R
Sbjct: 116 QDLHMMDLR 124
Score = 131 (51.2 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 141 KFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYWRI 200
+FGF++G TL F+KY NFK+ YF SK F+ + +V E EYW++
Sbjct: 341 EFGFETGNYYTLSNFEKYCDNFKKNYF----SK-------FKDSEITEDIV--EKEYWKL 387
Query: 201 IERPTDEVEVYYGADLETGAFASGFP 226
++ +EV YGADL T S FP
Sbjct: 388 VKDNNTSLEVEYGADLSTLDQGSAFP 413
Score = 73 (30.8 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 27/109 (24%), Positives = 47/109 (43%)
Query: 769 QQSKLPLVDFLKTDT-INGSNVRTSVTDQRFQKKLETCVEPINFGCVM---CGKLWCSKQ 824
+Q +P +F D + R S + C +P+N C + C + +C+K
Sbjct: 278 KQQYMPADNFGSNDNHSHNKKRRLSSLSTNNNHLCDNCHKPVN--CEVEDTCKEAYCTKC 335
Query: 825 AIFPKGFRSRV-NFYSVLNPEKVC-----NYISEVLDAGLLGPLFKVEF 867
I P F N+Y++ N EK C NY S+ D+ + + + E+
Sbjct: 336 IINPYEFGFETGNYYTLSNFEKYCDNFKKNYFSKFKDSEITEDIVEKEY 384
Score = 64 (27.6 bits), Expect = 6.8e-73, Sum P(3) = 6.8e-73
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 494 ECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLV 548
+C C + S C C C H C C++ ++ + L+ +EL L+
Sbjct: 660 QCQHCKAFSYFSQVACSCKSIT-VCPLHIEYLCKCDLSNKTLRLKVDDNELQKLL 713
Score = 37 (18.1 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 311 SHASTLEKAMRKHL 324
SHAS EK ++ H+
Sbjct: 168 SHASLSEKELKVHV 181
>CGD|CAL0000662 [details] [associations]
symbol:orf19.5651 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0000662
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACQ01000129 EMBL:AACQ01000128 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 RefSeq:XP_713332.1
RefSeq:XP_713379.1 ProteinModelPortal:Q59UR9 STRING:Q59UR9
GeneID:3644970 GeneID:3645037 KEGG:cal:CaO19.13096
KEGG:cal:CaO19.5651 Uniprot:Q59UR9
Length = 723
Score = 577 (208.2 bits), Expect = 3.0e-64, Sum P(2) = 3.0e-64
Identities = 123/287 (42%), Positives = 170/287 (59%)
Query: 141 KFGFQSGPDL--TLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEP-SVVDIEGEY 197
++GF D+ T+ F K Q+F D+K ++ ++ + P SV DIE ++
Sbjct: 230 EYGFDEDVDVKYTIPEFYKMCQDF--------DAKF-IR----DYNQNNPLSVDDIERKF 276
Query: 198 WRIIERPTDEVEVYYGADLET--GAFASGFPKAS--SLGTESDLDQYAMSG-WNLNNLPR 252
W ++ ++EV YGAD+ SGFP A SL T QY ++ WNLN LP
Sbjct: 277 WSFVDAEKSDLEVKYGADIHNLRPGEVSGFPMADTPSLDTTDPAIQYYINHPWNLNKLPF 336
Query: 253 LPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSH 312
GS+L F + ISG+ +PW+Y+G S+FCWHVEDH+ S NY H+G K WYG+P S
Sbjct: 337 SNGSLLNFINTSISGMTIPWIYIGSLLSTFCWHVEDHYTLSANYCHFGATKKWYGIPSSF 396
Query: 313 ASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAY 372
A EK MR PDLF+ QPDLLH+LVT +SPS L G+P + Q+S EFV+T+P Y
Sbjct: 397 ADKFEKLMRDSAPDLFKRQPDLLHQLVTLMSPSKLVEHGIPCVYADQNSNEFVITYPLVY 456
Query: 373 HSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
H+GFNCGFN EAVN A +WL G+++V Y ++ +H +LL
Sbjct: 457 HAGFNCGFNFNEAVNFAIDEWLEFGEKSVNDYRPIKKENVFNHYELL 503
Score = 100 (40.3 bits), Expect = 3.0e-64, Sum P(2) = 3.0e-64
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 28 IIDEAPVFYPTVEEFEDTLGYIA--KIRSKAESFGICRIVPPSSWTP 72
++ PV PT +EF D +GY++ K+ ++G+ +IVPP +W P
Sbjct: 7 LLTPCPVLTPTDQEFNDPVGYLSSDKVSKLGATYGLVKIVPPPNWKP 53
>SGD|S000003880 [details] [associations]
symbol:JHD2 "JmjC domain family histone demethylase specific
for H3-K4" species:4932 "Saccharomyces cerevisiae" [GO:0032453
"histone demethylase activity (H3-K4 specific)" evidence=IDA;IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016577 "histone demethylation" evidence=IDA;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 SGD:S000003880
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0046872
GO:GO:0008270 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
EMBL:Z49619 EMBL:Z49620 PIR:S57142 RefSeq:NP_012653.1
ProteinModelPortal:P47156 SMR:P47156 DIP:DIP-4835N IntAct:P47156
MINT:MINT-537060 STRING:P47156 PaxDb:P47156 EnsemblFungi:YJR119C
GeneID:853583 KEGG:sce:YJR119C CYGD:YJR119c HOGENOM:HOG000113131
OMA:RNISGMT OrthoDB:EOG44N21B NextBio:974376 Genevestigator:P47156
GermOnline:YJR119C GO:GO:0032453 Uniprot:P47156
Length = 728
Score = 451 (163.8 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46
Identities = 96/239 (40%), Positives = 134/239 (56%)
Query: 182 EHKRLEP----SVVDIEGEYWRII--ERPTDEVEVYYGADL--ETGAFASGFPKASSL-- 231
++ RL P S+ ++E +W ++ R + V YGAD+ E +GFP +
Sbjct: 310 QNSRLLPARKLSIDELEEMFWSLVTKNRRSSLTTVKYGADIHNELPGQITGFPTREFIPK 369
Query: 232 ---GTES-DLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVE 287
G E D +Y NL NLP S+L +ISG+ +PW+Y+G FS+FCWH+E
Sbjct: 370 NINGDELIDYLKYCDHPMNLTNLPMAHNSLLPLFKRNISGMTIPWIYIGSLFSTFCWHME 429
Query: 288 DHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSP--S 345
D + S NY H GDPK+WY +P S + + PDLF +QPDLLH+LVT +SP
Sbjct: 430 DQYTLSANYQHEGDPKVWYSIPESGCTKFNDLLNDMSPDLFIKQPDLLHQLVTLISPYDP 489
Query: 346 VLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELY 404
K G+PVY VQ E+++TFP+ YH+GFN G+N EAVN WL +G A+ Y
Sbjct: 490 NFKKSGIPVYKAVQKPNEYIITFPKCYHAGFNTGYNFNEAVNFTIDFWLPYGFGAITDY 548
Score = 108 (43.1 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 29 IDEAPVFYPTVEEFEDTLGYIAK--IRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAK 86
++E P YPT +EF++ + Y++ I+ +G+ ++VPP+ + PP + EN
Sbjct: 1 MEEIPALYPTEQEFKNPIDYLSNPHIKRLGVRYGMVKVVPPNGFCPPLSIDM----ENFT 56
Query: 87 FSTRIQQIDLL--QNR 100
F RIQ ++ L +NR
Sbjct: 57 FQPRIQNLENLDLKNR 72
>UNIPROTKB|Q92833 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=TAS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0045892 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0007417 GO:GO:0001889 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 GO:GO:0048536 GO:GO:0048538
EMBL:CH471087 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:U57592 EMBL:AK292861 EMBL:AK299349 EMBL:AK303610 EMBL:AL136162
EMBL:AL021938 EMBL:BC046184 EMBL:BC046246 IPI:IPI00023756
IPI:IPI00871836 IPI:IPI00955447 RefSeq:NP_001253969.1
RefSeq:NP_004964.2 UniGene:Hs.269059 ProteinModelPortal:Q92833
SMR:Q92833 DIP:DIP-45494N IntAct:Q92833 STRING:Q92833
PhosphoSite:Q92833 DMDM:61252601 PaxDb:Q92833 PRIDE:Q92833
Ensembl:ENST00000341776 Ensembl:ENST00000397311 GeneID:3720
KEGG:hsa:3720 UCSC:uc003nbj.3 GeneCards:GC06P015246 HGNC:HGNC:6196
HPA:HPA044909 MIM:601594 neXtProt:NX_Q92833 PharmGKB:PA29995
InParanoid:Q92833 OMA:QRLACIK GenomeRNAi:3720 NextBio:14577
ArrayExpress:Q92833 Bgee:Q92833 CleanEx:HS_JARID2
Genevestigator:Q92833 GermOnline:ENSG00000008083 Uniprot:Q92833
Length = 1246
Score = 383 (139.9 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 86/243 (35%), Positives = 127/243 (52%)
Query: 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWN 246
EP+ +IE EYWR++E V V+ G ++T SGFP S + ++ GWN
Sbjct: 840 EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFPVGKS-------EPFSRHGWN 891
Query: 247 LNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWY 306
L LP GS+L G+ + GV +PWL +GM FS+ CW + +HL ++YLH G IWY
Sbjct: 892 LTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 950
Query: 307 GVPGSHASTLEKAMRKHLPDLFEEQPDL-LHELVTQLSPSVLKAEGVPVYHVVQHSGEFV 365
+P + LE + L P L + E +SP VL EG+ V+ VQ SG+FV
Sbjct: 951 CIPAEEENKLEDVVHTLLQA--NGTPGLQMLESNVMISPEVLCKEGIKVHRTVQQSGQFV 1008
Query: 366 LTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQA 425
+ FP ++ S CG++ +E V+ A W + G + + +H S +KLL+ QA
Sbjct: 1009 VCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQA 1068
Query: 426 AIK 428
K
Sbjct: 1069 EAK 1071
Score = 157 (60.3 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 29 IDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFS 88
+DE PV P+ +EF D L YI +R++ E FG+CR++PP W P C L + +F
Sbjct: 554 MDEIPVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPPPDWRPECKLN-----DEMRFV 608
Query: 89 TRIQQIDLLQNR 100
T+IQ I L R
Sbjct: 609 TQIQHIHKLGRR 620
>MGI|MGI:104813 [details] [associations]
symbol:Jarid2 "jumonji, AT rich interactive domain 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0001889 "liver development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA;TAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031061 "negative regulation of histone methylation"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048538 "thymus development" evidence=IMP] [GO:0048863 "stem
cell differentiation" evidence=IMP] [GO:0051574 "positive
regulation of histone H3-K9 methylation" evidence=IDA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 MGI:MGI:104813
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0001889
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0000122
GO:GO:0048536 GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:CH466546 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 CTD:3720
eggNOG:NOG327026 HOGENOM:HOG000013203 HOVERGEN:HBG052160 KO:K11478
OrthoDB:EOG4KKZ26 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:D31967 EMBL:AK045214 EMBL:AK147226 EMBL:AK164134
EMBL:BC003374 EMBL:BC052444 EMBL:BC060695 IPI:IPI00124575
IPI:IPI00955365 PIR:T30254 RefSeq:NP_001191972.1
RefSeq:NP_001191973.1 RefSeq:NP_068678.1 UniGene:Mm.25059 PDB:2RQ5
PDBsum:2RQ5 ProteinModelPortal:Q62315 SMR:Q62315 DIP:DIP-34312N
IntAct:Q62315 MINT:MINT-4792531 STRING:Q62315 PhosphoSite:Q62315
PRIDE:Q62315 Ensembl:ENSMUST00000044608 Ensembl:ENSMUST00000173246
Ensembl:ENSMUST00000173704 GeneID:16468 KEGG:mmu:16468
UCSC:uc007qgr.1 UCSC:uc007qgv.1 InParanoid:Q3TPU4 ChiTaRS:JARID2
EvolutionaryTrace:Q62315 NextBio:289745 Bgee:Q62315
CleanEx:MM_JARID2 Genevestigator:Q62315
GermOnline:ENSMUSG00000038518 Uniprot:Q62315
Length = 1234
Score = 385 (140.6 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 86/243 (35%), Positives = 127/243 (52%)
Query: 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWN 246
EP+ +IE EYWR++E V V+ G ++T SGFP S + ++ GWN
Sbjct: 838 EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFPVGKS-------EPFSRHGWN 889
Query: 247 LNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWY 306
L LP GS+L G+ + GV +PWL +GM FS+ CW + +HL ++YLH G IWY
Sbjct: 890 LTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 948
Query: 307 GVPGSHASTLEKAMRKHLPDLFEEQPDL-LHELVTQLSPSVLKAEGVPVYHVVQHSGEFV 365
+P + LE + L P L + E +SP VL +G+ V+ VQ SG+FV
Sbjct: 949 CIPAEEENKLEDVVHTLLQG--NGTPGLQMLESNVMISPEVLCKKGIKVHRTVQQSGQFV 1006
Query: 366 LTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQA 425
+ FP ++ S CG+N +E V+ A W + G + + +H S +KLL+ QA
Sbjct: 1007 VCFPGSFVSKVCCGYNVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQA 1066
Query: 426 AIK 428
K
Sbjct: 1067 EAK 1069
Score = 154 (59.3 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 29 IDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFS 88
+DE PV P+ +EF D L YI +R++ E +G+CR++PP W P C L + +F
Sbjct: 552 MDEIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLN-----DEMRFV 606
Query: 89 TRIQQIDLLQNR 100
T+IQ I L R
Sbjct: 607 TQIQHIHKLGRR 618
Score = 39 (18.8 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 166 YFGMNDSKEDVKSDGFE 182
YFG + +EDV+ + E
Sbjct: 175 YFGSSQDEEDVEEEDDE 191
>UNIPROTKB|B2RXH2 [details] [associations]
symbol:KDM4E "Lysine-specific demethylase 4E" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 eggNOG:NOG317950 HOGENOM:HOG000231125 EMBL:AP002383
EMBL:BC157851 EMBL:BC157889 EMBL:BC171916 IPI:IPI00887640
RefSeq:NP_001155102.1 UniGene:Hs.714692 PDB:2W2I PDBsum:2W2I
ProteinModelPortal:B2RXH2 SMR:B2RXH2 PRIDE:B2RXH2
Ensembl:ENST00000450979 Ensembl:ENST00000576054 GeneID:390245
KEGG:hsa:390245 UCSC:uc010ruf.1 CTD:390245 GeneCards:GC11P094759
HGNC:HGNC:37098 neXtProt:NX_B2RXH2 PharmGKB:PA165543440 OMA:PESYELW
OrthoDB:EOG45491F BindingDB:B2RXH2 ChEMBL:CHEMBL1293226
EvolutionaryTrace:B2RXH2 GenomeRNAi:390245 NextBio:103576
Uniprot:B2RXH2
Length = 506
Score = 389 (142.0 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 93/255 (36%), Positives = 132/255 (51%)
Query: 195 GEYWRIIERPTDEVEVYYG-ADLETGAFAS--GFPKASSLGTESDLDQYAMSGWNLNNLP 251
G+Y R+ + + ADLE + S G P L + + WNL +L
Sbjct: 96 GQYRRLANSKKYQTPPHQNFADLEQRYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLG 155
Query: 252 RLPGSVLAFE-GSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPG 310
+ +L E G I GV P+LY GM ++F WH ED LYS+NYLH+G+PK WY VP
Sbjct: 156 TIL-DLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPP 214
Query: 311 SHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPR 370
H LE+ R+ PD+ L V +SP+VLK G+P + Q +GEF++TFP
Sbjct: 215 EHGQHLERLARELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPY 274
Query: 371 AYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKAL 430
YH+GFN GFNCAEA+N A W+ +G+ A + + T S D + VQ L
Sbjct: 275 GYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGESTVT-FSMDPFV-RIVQPESYEL 332
Query: 431 W----ELSVLQKKTP 441
W +L++++ P
Sbjct: 333 WKHRQDLAIVEHTEP 347
Score = 96 (38.9 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTPPCPLKAKNIWENAK---FSTR 90
FYPT+EEF D Y+A + S+ A G+ +++PP W KA+ ++++ + +T
Sbjct: 18 FYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEW------KARQMYDDIEDILIATP 71
Query: 91 IQQI 94
+QQ+
Sbjct: 72 LQQV 75
>UNIPROTKB|F1RUJ7 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:CT841540 EMBL:CT737348 Ensembl:ENSSSCT00000001155
Uniprot:F1RUJ7
Length = 1232
Score = 384 (140.2 bits), Expect = 1.9e-42, Sum P(2) = 1.9e-42
Identities = 87/243 (35%), Positives = 127/243 (52%)
Query: 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWN 246
EP+ +IE EYWR++E V V+ G ++T SGFP S + ++ GWN
Sbjct: 834 EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFPVGKS-------EPFSRHGWN 885
Query: 247 LNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWY 306
L LP GS+L G+ + GV +PWL +GM FS+ CW + +HL ++YLH G IWY
Sbjct: 886 LTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 944
Query: 307 GVPGSHASTLEKAMRKHLPDLFEEQPDL-LHELVTQLSPSVLKAEGVPVYHVVQHSGEFV 365
+P + LE + L P L + E +SP VL EGV V+ VQ SG+FV
Sbjct: 945 CIPAEEENKLEDVVHTLLQA--NGTPGLQMLESNVMISPEVLCREGVKVHRAVQQSGQFV 1002
Query: 366 LTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQA 425
+ FP ++ S CG++ +E V+ A W + G + + +H S +KLL+ QA
Sbjct: 1003 VCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQA 1062
Query: 426 AIK 428
K
Sbjct: 1063 EAK 1065
Score = 154 (59.3 bits), Expect = 1.9e-42, Sum P(2) = 1.9e-42
Identities = 34/98 (34%), Positives = 47/98 (47%)
Query: 3 QSKLAAESHIKEISARWDPAEACRPIIDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGIC 62
QS+ H A A +DE PV P+ +EF D L YI +R + E +G+C
Sbjct: 522 QSEPLPRPHEAAAKAEKGAGRAGWAAMDEIPVLRPSAKEFHDPLVYIESVRPQVEKYGMC 581
Query: 63 RIVPPSSWTPPCPLKAKNIWENAKFSTRIQQIDLLQNR 100
R++PP W P C L + +F T+IQ I L R
Sbjct: 582 RVIPPPDWRPECKLN-----DEMRFVTQIQHIHKLGRR 614
Score = 39 (18.8 bits), Expect = 2.2e-30, Sum P(2) = 2.2e-30
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 166 YFGMNDSKEDVKSDGFE 182
YFG + +EDV+ + E
Sbjct: 162 YFGSSQDEEDVEEEDDE 178
>UNIPROTKB|F1P6D5 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
EMBL:AAEX03017561 EMBL:AAEX03017558 EMBL:AAEX03017559
EMBL:AAEX03017560 Ensembl:ENSCAFT00000015718 Uniprot:F1P6D5
Length = 1249
Score = 383 (139.9 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 86/243 (35%), Positives = 127/243 (52%)
Query: 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWN 246
EP+ +IE EYWR++E V V+ G ++T SGFP S + ++ GWN
Sbjct: 843 EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFPVGKS-------EPFSRHGWN 894
Query: 247 LNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWY 306
L LP GS+L G+ + GV +PWL +GM FS+ CW + +HL ++YLH G IWY
Sbjct: 895 LTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 953
Query: 307 GVPGSHASTLEKAMRKHLPDLFEEQPDL-LHELVTQLSPSVLKAEGVPVYHVVQHSGEFV 365
+P + LE + L P L + E +SP VL EG+ V+ VQ SG+FV
Sbjct: 954 CIPAEEENKLEDVVHTLLQA--NGTPGLQMLESNVMISPEVLCKEGIKVHRTVQQSGQFV 1011
Query: 366 LTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQA 425
+ FP ++ S CG++ +E V+ A W + G + + +H S +KLL+ QA
Sbjct: 1012 VCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQA 1071
Query: 426 AIK 428
K
Sbjct: 1072 EAK 1074
Score = 155 (59.6 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 29 IDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFS 88
+DE PV P+ +EF D L YI +R++ E +G+CR++PP W P C L + +F
Sbjct: 557 MDEIPVLRPSAKEFHDPLVYIESVRAQVEKYGMCRVIPPPDWRPECKLN-----DEMRFV 611
Query: 89 TRIQQIDLLQNR 100
T+IQ I L R
Sbjct: 612 TQIQHIHKLGRR 623
Score = 39 (18.8 bits), Expect = 2.9e-30, Sum P(2) = 2.9e-30
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 166 YFGMNDSKEDVKSDGFE 182
YFG + +EDV+ + E
Sbjct: 175 YFGSSQDEEDVEEEDDE 191
>UNIPROTKB|J9NWC2 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AAEX03017561
EMBL:AAEX03017558 EMBL:AAEX03017559 EMBL:AAEX03017560
Ensembl:ENSCAFT00000043518 Uniprot:J9NWC2
Length = 1259
Score = 383 (139.9 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 86/243 (35%), Positives = 127/243 (52%)
Query: 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWN 246
EP+ +IE EYWR++E V V+ G ++T SGFP S + ++ GWN
Sbjct: 853 EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFPVGKS-------EPFSRHGWN 904
Query: 247 LNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWY 306
L LP GS+L G+ + GV +PWL +GM FS+ CW + +HL ++YLH G IWY
Sbjct: 905 LTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 963
Query: 307 GVPGSHASTLEKAMRKHLPDLFEEQPDL-LHELVTQLSPSVLKAEGVPVYHVVQHSGEFV 365
+P + LE + L P L + E +SP VL EG+ V+ VQ SG+FV
Sbjct: 964 CIPAEEENKLEDVVHTLLQA--NGTPGLQMLESNVMISPEVLCKEGIKVHRTVQQSGQFV 1021
Query: 366 LTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQA 425
+ FP ++ S CG++ +E V+ A W + G + + +H S +KLL+ QA
Sbjct: 1022 VCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQA 1081
Query: 426 AIK 428
K
Sbjct: 1082 EAK 1084
Score = 155 (59.6 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 29 IDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFS 88
+DE PV P+ +EF D L YI +R++ E +G+CR++PP W P C L + +F
Sbjct: 567 MDEIPVLRPSAKEFHDPLVYIESVRAQVEKYGMCRVIPPPDWRPECKLN-----DEMRFV 621
Query: 89 TRIQQIDLLQNR 100
T+IQ I L R
Sbjct: 622 TQIQHIHKLGRR 633
Score = 39 (18.8 bits), Expect = 3.0e-30, Sum P(2) = 3.0e-30
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 166 YFGMNDSKEDVKSDGFE 182
YFG + +EDV+ + E
Sbjct: 175 YFGSSQDEEDVEEEDDE 191
>UNIPROTKB|F1MH56 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:DAAA02055659 EMBL:DAAA02055660 EMBL:DAAA02055661
EMBL:DAAA02055662 IPI:IPI00689067 ProteinModelPortal:F1MH56
Ensembl:ENSBTAT00000017189 NextBio:20874777 Uniprot:F1MH56
Length = 1248
Score = 381 (139.2 bits), Expect = 5.4e-42, Sum P(2) = 5.4e-42
Identities = 86/243 (35%), Positives = 126/243 (51%)
Query: 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWN 246
EP+ +IE EYWR++E V V+ G ++T SGFP S + ++ GWN
Sbjct: 852 EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFPVGKS-------EPFSRHGWN 903
Query: 247 LNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWY 306
L LP GS+L G+ + GV +PWL +GM FS+ CW + +HL ++YLH G IWY
Sbjct: 904 LTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 962
Query: 307 GVPGSHASTLEKAMRKHLPDLFEEQPDL-LHELVTQLSPSVLKAEGVPVYHVVQHSGEFV 365
+P LE + L P L + E +SP VL EG+ V+ VQ SG+FV
Sbjct: 963 CIPAEEEHKLEDVVHTLLQA--NGTPGLQMLESNVMISPEVLCREGIKVHRTVQQSGQFV 1020
Query: 366 LTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQA 425
+ FP ++ S CG++ +E V+ A W + G + + +H S +KLL+ QA
Sbjct: 1021 VCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQA 1080
Query: 426 AIK 428
K
Sbjct: 1081 EAK 1083
Score = 153 (58.9 bits), Expect = 5.4e-42, Sum P(2) = 5.4e-42
Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 29 IDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFS 88
+DE PV P+ +EF D L YI +R + E +G+CR++PP W P C L + +F
Sbjct: 566 MDEIPVLRPSAKEFHDPLVYIESVRPQVEKYGMCRVIPPPDWRPECKLN-----DEMRFV 620
Query: 89 TRIQQIDLLQNR 100
T+IQ I L R
Sbjct: 621 TQIQHIHKLGRR 632
Score = 39 (18.8 bits), Expect = 4.9e-30, Sum P(2) = 4.9e-30
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 166 YFGMNDSKEDVKSDGFE 182
YFG + +EDV+ + E
Sbjct: 187 YFGSSQDEEDVEEEDDE 203
>TAIR|locus:2146653 [details] [associations]
symbol:ELF6 "EARLY FLOWERING 6" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0048577 "negative regulation
of short-day photoperiodism, flowering" evidence=IMP] [GO:0048579
"negative regulation of long-day photoperiodism, flowering"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IMP]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0009630
"gravitropism" evidence=RCA] [GO:0019344 "cysteine biosynthetic
process" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 GO:GO:0005634 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0003676 GO:GO:0009826 GO:GO:0016702 eggNOG:COG5048
Gene3D:3.30.160.60 GO:GO:0048577 GO:GO:0033169 GO:GO:0009741
EMBL:AL391716 GO:GO:0048579 InterPro:IPR003349 PROSITE:PS51183
EMBL:AY664500 EMBL:AK222064 IPI:IPI00540726 RefSeq:NP_196044.2
UniGene:At.10092 UniGene:At.72547 HSSP:P08151
ProteinModelPortal:Q6BDA0 SMR:Q6BDA0 DIP:DIP-46102N IntAct:Q6BDA0
PRIDE:Q6BDA0 EnsemblPlants:AT5G04240.1 GeneID:830303
KEGG:ath:AT5G04240 TAIR:At5g04240 HOGENOM:HOG000239739
InParanoid:Q6BDA0 OMA:CGEAANF PhylomeDB:Q6BDA0
ProtClustDB:CLSN2681632 ArrayExpress:Q6BDA0 Genevestigator:Q6BDA0
Pfam:PF02375 SMART:SM00545 Uniprot:Q6BDA0
Length = 1340
Score = 411 (149.7 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 82/181 (45%), Positives = 108/181 (59%)
Query: 243 SGWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDP 302
S WNL + R PGSV F DI GV P +Y+GM FS F WHVEDH L+S+NYLH G P
Sbjct: 263 SSWNLQMIARSPGSVTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNYLHTGSP 322
Query: 303 KIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHEL---VTQLSPSVLKAEGVPVYHVVQ 359
K WY VP +A E+ +RK+ +Q L +L T +SP ++ A G+P +VQ
Sbjct: 323 KTWYAVPCDYALDFEEVIRKNSYGRNIDQLAALTQLGEKTTLVSPEMIVASGIPCCRLVQ 382
Query: 360 HSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLL 419
+ GEFV+TFPR+YH GF+ GFNC EA N WL ++A + + LSH +LL
Sbjct: 383 NPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWLNVAKEAAVRRAAMNYLPMLSHQQLL 442
Query: 420 F 420
+
Sbjct: 443 Y 443
Score = 119 (46.9 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 32 APVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPP 67
APVF PT EF D + YI+KI +A +FGIC+I+PP
Sbjct: 16 APVFRPTDTEFADPIAYISKIEKEASAFGICKIIPP 51
Score = 45 (20.9 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 629 EPQRGTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIPDGNESKLLLSD 688
EP + LS+S N ++ QV+N + ++ EV N +VI N + +
Sbjct: 1093 EPLESSDILSSS----NGDEASSNGLQVLNDELSMESEVSSSENTEVIEAPNS----MGE 1144
Query: 689 SHGKEAIEN 697
+ K IE+
Sbjct: 1145 AKKKRKIES 1153
>TAIR|locus:504955644 [details] [associations]
symbol:REF6 "relative of early flowering 6"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0009741 "response to brassinosteroid
stimulus" evidence=IMP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0003676 GO:GO:0009826
GO:GO:0016702 Gene3D:3.30.160.60 GO:GO:0010228 GO:GO:0048366
GO:GO:0033169 GO:GO:0009741 GO:GO:0035067 EMBL:AL049659
InterPro:IPR003349 PROSITE:PS51183 HSSP:P08151 Pfam:PF02375
SMART:SM00545 EMBL:AY664499 IPI:IPI00537359 PIR:T06699
RefSeq:NP_680116.2 UniGene:At.3169 ProteinModelPortal:Q9STM3
SMR:Q9STM3 DIP:DIP-46006N IntAct:Q9STM3 PaxDb:Q9STM3 PRIDE:Q9STM3
EnsemblPlants:AT3G48430.1 GeneID:824002 KEGG:ath:AT3G48430
TAIR:At3g48430 eggNOG:NOG303077 HOGENOM:HOG000082763
InParanoid:Q9STM3 OMA:ELVINHE PhylomeDB:Q9STM3
ProtClustDB:CLSN2918915 Genevestigator:Q9STM3 Uniprot:Q9STM3
Length = 1360
Score = 420 (152.9 bits), Expect = 2.1e-41, Sum P(3) = 2.1e-41
Identities = 118/326 (36%), Positives = 168/326 (51%)
Query: 144 FQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYWRI-IE 202
+QSG + + F+ A+NF++ Y +K G K+ + S ++IE YWR ++
Sbjct: 118 WQSGEEYSFGEFEFKAKNFEKNY---------LKKCG---KKSQLSALEIETLYWRATVD 165
Query: 203 RPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAM--SGWNLNNLPRLPGSVLAF 260
+P V Y D+ AF A++ ES + + + WN+ + R GS+L F
Sbjct: 166 KP---FSVEYANDMPGSAFIP-LSLAAARRRESGGEGGTVGETAWNMRAMSRAEGSLLKF 221
Query: 261 EGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAM 320
+I GV P +YV M FS F WHVEDH L+SLNYLH G K WYGVP A E+ +
Sbjct: 222 MKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPKDAALAFEEVV 281
Query: 321 RKHLPDLFEEQPDL-----LHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSG 375
R H EE L L E T +SP V G+P +VQ+ GEFV+TFP AYHSG
Sbjct: 282 RVH--GYGEELNPLVTFSTLGEKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPGAYHSG 339
Query: 376 FNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSV 435
F+ GFN EA N+A +WL + A + + +SH +LL+ V A+ + S+
Sbjct: 340 FSHGFNFGEASNIATPEWLRMAKDAAIRRAAINYPPMVSHLQLLYDFV-LALGSRVPTSI 398
Query: 436 LQKKTPGNRKWKDACGKDGV-LTKAI 460
K P + + KD +G LTK +
Sbjct: 399 NPK--PRSSRLKDKARSEGERLTKKL 422
Score = 115 (45.5 bits), Expect = 2.1e-41, Sum P(3) = 2.1e-41
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 32 APVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNI 81
AP F PT+ EF+D + YI KI +A +GIC+I+PP PP P K +I
Sbjct: 20 APEFRPTLAEFQDPIAYILKIEEEASRYGICKILPP---LPP-PSKKTSI 65
Score = 39 (18.8 bits), Expect = 2.1e-41, Sum P(3) = 2.1e-41
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 816 CGKLWCSKQ 824
CGK+W S Q
Sbjct: 884 CGKVWMSHQ 892
>UNIPROTKB|F1NWZ0 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0031061
"negative regulation of histone methylation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 IPI:IPI00597467 GO:GO:0031061
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AADN02027529
EMBL:AADN02027521 EMBL:AADN02027522 EMBL:AADN02027523
EMBL:AADN02027524 EMBL:AADN02027525 EMBL:AADN02027526
EMBL:AADN02027527 EMBL:AADN02027528 Ensembl:ENSGALT00000020740
Uniprot:F1NWZ0
Length = 1220
Score = 374 (136.7 bits), Expect = 9.9e-41, Sum P(2) = 9.9e-41
Identities = 81/242 (33%), Positives = 128/242 (52%)
Query: 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWN 246
EP+V ++E EYWR++E+ V V+ G ++T SGFP S + ++ GWN
Sbjct: 816 EPTVAEVEQEYWRLVEQKDSHVAVHCGK-VDTNTHGSGFPVGKS-------EPFSRHGWN 867
Query: 247 LNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWY 306
L LP GS+L G+ + GV +PWL +GM FS+ CW + +HL ++YLH G IWY
Sbjct: 868 LTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 926
Query: 307 GVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVL 366
+P + + L+ + L ++L V +SP +L EG+ V+ VQ SG+FV+
Sbjct: 927 CIPAAEENKLDDVVHTLLQANGTPGLEMLESNV-MISPEILCKEGIRVHRTVQQSGQFVV 985
Query: 367 TFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAA 426
FP ++ S CG++ +E V+ A W + G + + + S +KLL+ A
Sbjct: 986 CFPGSFVSKVCCGYSVSETVHFATTQWTSMGFKTAKEMKRRRIAKPFSMEKLLYQIATAE 1045
Query: 427 IK 428
K
Sbjct: 1046 AK 1047
Score = 148 (57.2 bits), Expect = 9.9e-41, Sum P(2) = 9.9e-41
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 28 IIDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKF 87
++ E P+ P+ +EF D L YI +R++ E +G+CR++PP W P C L + +F
Sbjct: 529 MLGEIPILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLN-----DEMRF 583
Query: 88 STRIQQIDLLQNR 100
T+IQ I L R
Sbjct: 584 VTQIQHIHKLGRR 596
>UNIPROTKB|Q5F363 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0051574 "positive regulation of histone
H3-K9 methylation" evidence=ISS] [GO:0031061 "negative regulation
of histone methylation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AJ851787
IPI:IPI00597467 RefSeq:NP_001012880.1 UniGene:Gga.12117
ProteinModelPortal:Q5F363 STRING:Q5F363 GeneID:420839
KEGG:gga:420839 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 InParanoid:Q5F363 KO:K11478 OrthoDB:EOG4KKZ26
NextBio:20823696 GO:GO:0031061 Uniprot:Q5F363
Length = 1233
Score = 374 (136.7 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 81/242 (33%), Positives = 128/242 (52%)
Query: 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWN 246
EP+V ++E EYWR++E+ V V+ G ++T SGFP S + ++ GWN
Sbjct: 829 EPTVAEVEQEYWRLVEQKDSHVAVHCGK-VDTNTHGSGFPVGKS-------EPFSRHGWN 880
Query: 247 LNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWY 306
L LP GS+L G+ + GV +PWL +GM FS+ CW + +HL ++YLH G IWY
Sbjct: 881 LTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 939
Query: 307 GVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVL 366
+P + + L+ + L ++L V +SP +L EG+ V+ VQ SG+FV+
Sbjct: 940 CIPAAEENKLDDVVHTLLQANGTPGLEMLESNV-MISPEILCKEGIRVHRTVQQSGQFVV 998
Query: 367 TFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAA 426
FP ++ S CG++ +E V+ A W + G + + + S +KLL+ A
Sbjct: 999 CFPGSFVSKVCCGYSVSETVHFATTQWTSMGFKTAKEMKRRRIAKPFSMEKLLYQIATAE 1058
Query: 427 IK 428
K
Sbjct: 1059 AK 1060
Score = 148 (57.2 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 28 IIDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKF 87
++ E P+ P+ +EF D L YI +R++ E +G+CR++PP W P C L + +F
Sbjct: 542 MLGEIPILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLN-----DEMRF 596
Query: 88 STRIQQIDLLQNR 100
T+IQ I L R
Sbjct: 597 VTQIQHIHKLGRR 609
>ZFIN|ZDB-GENE-061218-1 [details] [associations]
symbol:jarid2a "jumonji, AT rich interactive domain
2a" species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-061218-1 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
EMBL:CR391941 IPI:IPI00799170 Ensembl:ENSDART00000086333
Bgee:E7F6J7 Uniprot:E7F6J7
Length = 1171
Score = 370 (135.3 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 78/234 (33%), Positives = 126/234 (53%)
Query: 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWN 246
EP ++E EYWR+++ V V+ G ++T SGFP S + ++ GWN
Sbjct: 777 EPDTAEVEKEYWRLVDEKESHVAVHCGR-VDTKTHGSGFPVGKS-------EPFSKHGWN 828
Query: 247 LNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWY 306
LN L GS+L G+ + GV +PWL +GM FS+ CW + + L ++YLH G IWY
Sbjct: 829 LNVLSNNSGSILRHLGA-VPGVTIPWLNIGMVFSTSCWCRDQNSLPYIDYLHTGADCIWY 887
Query: 307 GVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVL 366
+P S L+K + L ++L + +SP VL+ +GV VY VQHSG+F++
Sbjct: 888 CIPAEEKSKLDKVVHTLLQANGTPGLEMLERNI-MISPEVLRRKGVKVYRTVQHSGQFMV 946
Query: 367 TFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLF 420
FP + + CG++ +E ++ A + W+ G +A + + + S +KLL+
Sbjct: 947 CFPGTFVAKVCCGYSVSETMHFANLQWMKLGYEAAKDLKRRRIEEPFSTEKLLY 1000
Score = 151 (58.2 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 29 IDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFS 88
I E PVFYP EF D L ++ R +AE+FG+ R+VPP+ W P C LK E +F
Sbjct: 499 ITELPVFYPNTHEFHDPLTFMELARGQAEAFGLFRVVPPAGWRPECKLK-----EEMRFV 553
Query: 89 TRIQQIDLLQNR 100
+ +Q + L R
Sbjct: 554 SYVQHVHKLGRR 565
Score = 39 (18.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 7/20 (35%), Positives = 8/20 (40%)
Query: 809 INFGCVMCGKLWCSKQAIFP 828
+N G V WC Q P
Sbjct: 854 LNIGMVFSTSCWCRDQNSLP 873
>ZFIN|ZDB-GENE-060503-246 [details] [associations]
symbol:jarid2b "jumonji, AT rich interactive domain
2b" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0035097 "histone methyltransferase
complex" evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0048863 "stem cell differentiation"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00558 ZFIN:ZDB-GENE-060503-246
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:BX842609 EMBL:BX890540 IPI:IPI00500491 RefSeq:NP_001189388.1
UniGene:Dr.108454 Ensembl:ENSDART00000147627 GeneID:558456
KEGG:dre:558456 CTD:558456 GeneTree:ENSGT00530000063118
InParanoid:Q1LVC2 OMA:CDESEIS NextBio:20882479 Bgee:Q1LVC2
Uniprot:Q1LVC2
Length = 1319
Score = 381 (139.2 bits), Expect = 3.2e-40, Sum P(3) = 3.2e-40
Identities = 111/375 (29%), Positives = 180/375 (48%)
Query: 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWN 246
EP ++E +YWRI+E+ V V+YG ++T SGFP S + ++ GWN
Sbjct: 910 EPGAAEVEQDYWRIVEQRDCHVAVHYGK-VDTNTHGSGFPVGKS-------EPFSKHGWN 961
Query: 247 LNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWY 306
L LP GS+L G+ + GV +PWL +GM FS+ CW + + L ++YLH G IWY
Sbjct: 962 LTVLPNNSGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSQDQNRLPYIDYLHTGADCIWY 1020
Query: 307 GVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVL 366
+P + L+K + L ++L + V +SP VL EG+ V+ VQ SG+FV+
Sbjct: 1021 SIPAEEKTKLDKVVHTLLQANGTPGLEMLEKNV-MISPEVLCREGIKVHRTVQQSGQFVV 1079
Query: 367 TFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAA 426
FP A+ S CG++ +E V+ A W+ G +A + + S +KLL+ A
Sbjct: 1080 VFPGAFVSRVCCGYSVSETVHFATPQWMNLGYEAAKDLKCRRIAKPFSMEKLLYQIATAE 1139
Query: 427 IK-----ALWELSVLQKKTPG-NRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKL 480
K L +S L K K + + G+L+ A R + K
Sbjct: 1140 AKRENRLVLSTISSLLKDLRNIEMKQRQELYEAGLLSSA---RYCTHDHNQSPADTRKKP 1196
Query: 481 QKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFV--ILR 538
+K + + +ER C C + +LS + + + CL+ A + + R + + R
Sbjct: 1197 RKW-LALE-SSERRCQMCQHLCYLSMV-VQENENVVFCLECALHYVEKHKNCRGLKMMYR 1253
Query: 539 YSTDELNTLVEALEG 553
Y +++N+LV + G
Sbjct: 1254 YDEEQINSLVNQVCG 1268
Score = 144 (55.7 bits), Expect = 3.2e-40, Sum P(3) = 3.2e-40
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 29 IDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFS 88
+ + P+F P+ EF+D L Y+ R + ES G+CR++PP+ W P C L + +F
Sbjct: 604 LGDVPIFKPSSREFQDPLVYLDSFREQVESCGLCRVLPPTDWRPECKLN-----DEMRFV 658
Query: 89 TRIQQIDLLQNR 100
T++Q+I L R
Sbjct: 659 TQVQRIHKLGRR 670
Score = 60 (26.2 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 21/97 (21%), Positives = 41/97 (42%)
Query: 594 EQKESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDE 653
E + + R +EG+ H S + + EP+ G +GLS + N H E + +
Sbjct: 788 EVRAEKEALERKRGPLEGHS---DNGHHSLALPRYEPKNGLNGLSHRNGFRNHHKEPDIQ 844
Query: 654 TQVMNKKAKVKHEVCIDLNMDVIPDGNESKLLLSDSH 690
Q ++ + + + + + E + +LSD H
Sbjct: 845 RQAGRRRLFAQEKKGEKVECEETEEEMEDEGVLSDQH 881
Score = 41 (19.5 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 166 YFGMNDSKEDVKSDGFEHKRLEPSV 190
YFG + +ED++ + + PSV
Sbjct: 167 YFGCSQDEEDLEDEDEIEEEKAPSV 191
Score = 40 (19.1 bits), Expect = 3.2e-40, Sum P(3) = 3.2e-40
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 147 GPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSD 179
G ++L F + A+N YF +V+ D
Sbjct: 887 GRSVSLTTFYRIARNTMMMYFNKEPGAAEVEQD 919
Score = 38 (18.4 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 770 QSKLPLVDFLKT 781
Q++LP +D+L T
Sbjct: 1002 QNRLPYIDYLHT 1013
>ZFIN|ZDB-GENE-030131-6279 [details] [associations]
symbol:kdm4ab "lysine (K)-specific demethylase 4A,
genome duplicate b" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 ZFIN:ZDB-GENE-030131-6279 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
HOGENOM:HOG000231125 OrthoDB:EOG4QRH37 HOVERGEN:HBG080483
IPI:IPI00489014 EMBL:BC047193 UniGene:Dr.24248
ProteinModelPortal:Q802U7 STRING:Q802U7 ArrayExpress:Q802U7
Uniprot:Q802U7
Length = 895
Score = 380 (138.8 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 73/170 (42%), Positives = 101/170 (59%)
Query: 232 GTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHL 291
GT D D + WN+ +L + +V G I GV P+LY GM ++F WH ED L
Sbjct: 135 GTLYDPD---IKEWNVGHLNTILDTVEHESGITIEGVNTPYLYFGMWKTTFAWHTEDMDL 191
Query: 292 YSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEG 351
YS+NYLH+G+PK WY VP H LE+ + P + L +T +SPS+LK G
Sbjct: 192 YSINYLHFGEPKSWYTVPPEHGKRLERLAKGFFPGSSQNCEAFLRHKMTLISPSILKKYG 251
Query: 352 VPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAV 401
+P + Q +GEF++TFP YH+GFN GFNCAE+ N A W+ +G+QA+
Sbjct: 252 IPFEKITQEAGEFMVTFPYGYHAGFNHGFNCAESTNFATRRWIDYGKQAI 301
Score = 99 (39.9 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 PIIDEAPVFYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
P+ F+PTVEEF++ YIA + S+ A G+ +IVPP +W P
Sbjct: 6 PVSRGIMTFHPTVEEFKNFSRYIAYMESQGAHKAGLAKIVPPKNWKP 52
Score = 60 (26.2 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 633 GTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIP 677
G +G + N NEG ++ + +H VC+D +V+P
Sbjct: 353 GEAGAQELRIE-NQSNEGQKKSLAKQRIGTKRHRVCLDFPEEVLP 396
>ZFIN|ZDB-GENE-070705-160 [details] [associations]
symbol:si:ch211-262l3.1 "si:ch211-262l3.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 ZFIN:ZDB-GENE-070705-160 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX640408 EMBL:CABZ01059930
EMBL:CABZ01059931 IPI:IPI00489014 Ensembl:ENSDART00000024302
OMA:VKEWNIC ArrayExpress:F1QNG0 Bgee:F1QNG0 Uniprot:F1QNG0
Length = 895
Score = 380 (138.8 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 73/170 (42%), Positives = 101/170 (59%)
Query: 232 GTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHL 291
GT D D + WN+ +L + +V G I GV P+LY GM ++F WH ED L
Sbjct: 135 GTLYDPD---IKEWNVGHLNTILDTVEHESGITIEGVNTPYLYFGMWKTTFAWHTEDMDL 191
Query: 292 YSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEG 351
YS+NYLH+G+PK WY VP H LE+ + P + L +T +SPS+LK G
Sbjct: 192 YSINYLHFGEPKSWYTVPPEHGKRLERLAKGFFPGSSQNCEAFLRHKMTLISPSILKKYG 251
Query: 352 VPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAV 401
+P + Q +GEF++TFP YH+GFN GFNCAE+ N A W+ +G+QA+
Sbjct: 252 IPFEKITQEAGEFMVTFPYGYHAGFNHGFNCAESTNFATRRWIDYGKQAI 301
Score = 99 (39.9 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 PIIDEAPVFYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
P+ F+PTVEEF++ YIA + S+ A G+ +IVPP +W P
Sbjct: 6 PVSRGIMTFHPTVEEFKNFSRYIAYMESQGAHKAGLAKIVPPKNWKP 52
Score = 60 (26.2 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 633 GTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIP 677
G +G + N NEG ++ + +H VC+D +V+P
Sbjct: 353 GEAGAQELRIE-NQSNEGQKKSLAKQRIGTKRHRVCLDFPEEVLP 396
>MGI|MGI:3606484 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:3606484 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
EMBL:CT485607 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
GeneTree:ENSGT00530000063342 eggNOG:NOG317950 OMA:FASKRWI
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:AK030020 EMBL:AK155227 EMBL:BC112372 IPI:IPI00651810
RefSeq:NP_775609.2 UniGene:Mm.240457 ProteinModelPortal:Q3U2K5
SMR:Q3U2K5 PhosphoSite:Q3U2K5 PRIDE:Q3U2K5 DNASU:244694
Ensembl:ENSMUST00000058796 Ensembl:ENSMUST00000115647 GeneID:244694
KEGG:mmu:244694 UCSC:uc009oen.1 InParanoid:A2CGB5 NextBio:386391
Bgee:Q3U2K5 CleanEx:MM_JMJD2D Genevestigator:Q3U2K5 Uniprot:Q3U2K5
Length = 510
Score = 371 (135.7 bits), Expect = 5.6e-38, Sum P(2) = 5.6e-38
Identities = 78/189 (41%), Positives = 107/189 (56%)
Query: 245 WNLNNLPRLPGSVLAFE-GSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPK 303
WN+ +L + +L E G I GV P+LY GM ++F WH ED LYS+NYLH+G PK
Sbjct: 149 WNVGHLGTIQ-DLLEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQPK 207
Query: 304 IWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGE 363
WY VP H LE+ R+ P + L V +SP+VLK G+P + Q +GE
Sbjct: 208 TWYAVPPEHGRRLERLARELFPGSSQGCQAFLRHKVALISPTVLKENGIPFGRITQEAGE 267
Query: 364 FVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSV 423
F++TFP YH+GFN GFNCAEA+N A W+ +G+ A + + R S S D + +
Sbjct: 268 FMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKVASQCSCGEAR-VSFSMDAFV-RIL 325
Query: 424 QAAIKALWE 432
Q LW+
Sbjct: 326 QPERYELWK 334
Score = 87 (35.7 bits), Expect = 5.6e-38, Sum P(2) = 5.6e-38
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 34 VFYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTRIQ 92
+F PT EEF D YIA + S+ A G+ +++PP W NI N +T +Q
Sbjct: 17 IFRPTKEEFNDFDKYIAYMESQGAHRAGLAKVIPPKEWR--ARQSYDNI-SNILIATPLQ 73
Query: 93 QI 94
Q+
Sbjct: 74 QV 75
>UNIPROTKB|Q6B0I6 [details] [associations]
symbol:KDM4D "Lysine-specific demethylase 4D" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 EMBL:CH471065 GO:GO:0046872
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 PDB:4HON PDBsum:4HON eggNOG:NOG317950
OMA:FASKRWI HOGENOM:HOG000231125 KO:K06709 EMBL:AK001113
EMBL:AK056162 EMBL:AP002383 EMBL:BC074739 EMBL:BC119010
EMBL:BC122858 EMBL:AL137545 IPI:IPI00017991 PIR:T46388
RefSeq:NP_060509.2 UniGene:Hs.503598 PDB:3DXT PDB:3DXU PDB:4HOO
PDBsum:3DXT PDBsum:3DXU PDBsum:4HOO ProteinModelPortal:Q6B0I6
SMR:Q6B0I6 DIP:DIP-29606N IntAct:Q6B0I6 STRING:Q6B0I6
PhosphoSite:Q6B0I6 DMDM:239938885 PRIDE:Q6B0I6
Ensembl:ENST00000335080 Ensembl:ENST00000536741
Ensembl:ENST00000570915 Ensembl:ENST00000576429 GeneID:55693
KEGG:hsa:55693 UCSC:uc001pfe.3 CTD:55693 GeneCards:GC11P094706
HGNC:HGNC:25498 MIM:609766 neXtProt:NX_Q6B0I6 PharmGKB:PA164721552
InParanoid:Q6B0I6 OrthoDB:EOG4F7NJR PhylomeDB:Q6B0I6
ChEMBL:CHEMBL6138 EvolutionaryTrace:Q6B0I6 GenomeRNAi:55693
NextBio:60511 Bgee:Q6B0I6 CleanEx:HS_JMJD2D Genevestigator:Q6B0I6
GermOnline:ENSG00000186280 Uniprot:Q6B0I6
Length = 523
Score = 370 (135.3 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 74/168 (44%), Positives = 98/168 (58%)
Query: 245 WNLNNLPRLPGSVLAFE-GSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPK 303
WNL +L + +L E G I GV P+LY GM ++F WH ED LYS+NYLH G+PK
Sbjct: 152 WNLGHLGTIQ-DLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPK 210
Query: 304 IWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGE 363
WY VP H LE+ R+ P L V +SP+VLK G+P + Q +GE
Sbjct: 211 TWYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVALISPTVLKENGIPFNRITQEAGE 270
Query: 364 FVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKT 411
F++TFP YH+GFN GFNCAEA+N A W+ +G+ A + + R T
Sbjct: 271 FMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGEARVT 318
Score = 94 (38.1 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 34 VFYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTPPCPLKAKNIWENAK---FST 89
+F+PT EEF D YIA + S+ A G+ +I+PP W KA+ ++N +T
Sbjct: 20 IFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEW------KARETYDNISEILIAT 73
Query: 90 RIQQI 94
+QQ+
Sbjct: 74 PLQQV 78
>RGD|1591045 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:1591045 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 eggNOG:NOG317950
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:BC128760 IPI:IPI00767164 RefSeq:NP_001073180.1
RefSeq:XP_003750480.1 RefSeq:XP_003750481.1 UniGene:Rn.202733
ProteinModelPortal:A1A5Q5 SMR:A1A5Q5 PRIDE:A1A5Q5
Ensembl:ENSRNOT00000033932 GeneID:100909834 GeneID:689582
KEGG:rno:100909834 KEGG:rno:689582 UCSC:RGD:1591045 NextBio:738978
Genevestigator:A1A5Q5 Uniprot:A1A5Q5
Length = 510
Score = 366 (133.9 bits), Expect = 6.6e-37, Sum P(2) = 6.6e-37
Identities = 75/173 (43%), Positives = 100/173 (57%)
Query: 245 WNLNNLPRLPGSVLAFE-GSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPK 303
WN+ +L + +L E G I GV P+LY GM +SF WH ED LYS+NYLH+G PK
Sbjct: 149 WNVGHLGTIQ-DLLEQECGIVIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGQPK 207
Query: 304 IWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGE 363
WY VP H LE ++ P + L V +SP+VLK G+P + Q +GE
Sbjct: 208 TWYAVPPEHGRRLELLAKELFPGSSQGCQAFLRHKVALISPTVLKENGIPFGRITQEAGE 267
Query: 364 FVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHD 416
F++TFP YH+GFN GFNCAEA+N A W+ +G+ A + + R S S D
Sbjct: 268 FMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKVASQCSCGEAR-VSFSMD 319
Score = 87 (35.7 bits), Expect = 6.6e-37, Sum P(2) = 6.6e-37
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 34 VFYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTRIQ 92
+F PT EEF D YIA + S+ A G+ +++PP W NI N +T +Q
Sbjct: 17 IFRPTKEEFNDFDKYIAYMESQGAHRAGLAKVIPPKEWR--ARQSYDNI-SNILIATPLQ 73
Query: 93 QI 94
Q+
Sbjct: 74 QV 75
>MGI|MGI:2446210 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0014898 "cardiac muscle hypertrophy in response to stress"
evidence=IMP] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 MGI:MGI:2446210 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 GO:GO:0035064 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC OrthoDB:EOG4QRH37 ChiTaRS:Kdm4A EMBL:AK129187
EMBL:AK054095 EMBL:AK136085 EMBL:AK145066 EMBL:AK145947
EMBL:AL626764 EMBL:BC028866 IPI:IPI00169645 IPI:IPI00648673
RefSeq:NP_001155295.1 RefSeq:NP_759014.2 UniGene:Mm.234234
ProteinModelPortal:Q8BW72 SMR:Q8BW72 STRING:Q8BW72
PhosphoSite:Q8BW72 PRIDE:Q8BW72 Ensembl:ENSMUST00000097911
Ensembl:ENSMUST00000106403 Ensembl:ENSMUST00000106406 GeneID:230674
KEGG:mmu:230674 HOVERGEN:HBG080483 InParanoid:A2A8L8 NextBio:380043
Bgee:Q8BW72 CleanEx:MM_JMJD2A Genevestigator:Q8BW72
GermOnline:ENSMUSG00000033326 Uniprot:Q8BW72
Length = 1064
Score = 378 (138.1 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 71/157 (45%), Positives = 93/157 (59%)
Query: 245 WNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKI 304
WN+ L + V G I GV P+LY GM +SF WH ED LYS+NYLH+G+PK
Sbjct: 148 WNIGRLKTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKS 207
Query: 305 WYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEF 364
WY VP H LE+ + P + L +T +SP +LK G+P V Q +GEF
Sbjct: 208 WYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 267
Query: 365 VLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAV 401
++TFP YH+GFN GFNCAE+ N A W+ +G+QAV
Sbjct: 268 MITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAV 304
Score = 99 (39.9 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
FYPT+EEF + YIA I S+ A G+ ++VPP W P
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKP 55
>UNIPROTKB|E1BPL5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:DAAA02009042 IPI:IPI00690786 RefSeq:NP_001193245.1
UniGene:Bt.58925 Ensembl:ENSBTAT00000002687 GeneID:512622
KEGG:bta:512622 NextBio:20870473 Uniprot:E1BPL5
Length = 1066
Score = 378 (138.1 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 78/188 (41%), Positives = 104/188 (55%)
Query: 245 WNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKI 304
WN+ L + V G I GV P+LY GM +SF WH ED LYS+NYLH+G+PK
Sbjct: 148 WNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKS 207
Query: 305 WYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEF 364
WY VP H LE+ + P + L +T +SP +LK G+P V Q +GEF
Sbjct: 208 WYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 267
Query: 365 VLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQ 424
++TFP YH+GFN GFNCAE+ N A W+ +G+QAV L S + +S D + Q
Sbjct: 268 MITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAV-LCSCRKDMVKISMD-VFVRKFQ 325
Query: 425 AAIKALWE 432
LW+
Sbjct: 326 PERYKLWK 333
Score = 99 (39.9 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
FYPT+EEF + YIA I S+ A G+ ++VPP W P
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKP 55
>UNIPROTKB|Q5RD88 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9601
"Pongo abelii" [GO:0035064 "methylated histone residue binding"
evidence=ISS] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:9682 KO:K06709 EMBL:CR858028
RefSeq:NP_001125120.1 UniGene:Pab.1791 ProteinModelPortal:Q5RD88
SMR:Q5RD88 GeneID:100172003 KEGG:pon:100172003 InParanoid:Q5RD88
Uniprot:Q5RD88
Length = 1064
Score = 378 (138.1 bits), Expect = 8.6e-36, Sum P(3) = 8.6e-36
Identities = 78/188 (41%), Positives = 104/188 (55%)
Query: 245 WNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKI 304
WN+ L + V G I GV P+LY GM +SF WH ED LYS+NYLH+G+PK
Sbjct: 148 WNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKS 207
Query: 305 WYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEF 364
WY VP H LE+ + P + L +T +SP +LK G+P V Q +GEF
Sbjct: 208 WYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 267
Query: 365 VLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQ 424
++TFP YH+GFN GFNCAE+ N A W+ +G+QAV L S + +S D + Q
Sbjct: 268 MITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAV-LCSCRKDMVKISMD-VFVRKFQ 325
Query: 425 AAIKALWE 432
LW+
Sbjct: 326 PERYKLWK 333
Score = 99 (39.9 bits), Expect = 8.6e-36, Sum P(3) = 8.6e-36
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
FYPT+EEF + YIA I S+ A G+ ++VPP W P
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKP 55
Score = 41 (19.5 bits), Expect = 8.6e-36, Sum P(3) = 8.6e-36
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 600 SSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQV 656
S S + + G+G SR VSS+ SEP + ++V+S+ +G+ V
Sbjct: 502 SGSKKKSSSSLGSGS--SRDSVSSDSETSEPLSCRAQGQTGVLTVHSYAKGDGRVTV 556
Score = 37 (18.1 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 21/91 (23%), Positives = 36/91 (39%)
Query: 666 EVCIDLNMDVIPDGNESKLLLSDSHGKEAIENLKAHLSACYQ--EKVLCSGTVKEQDTMQ 723
E C + +M+ + DG E L S K I K H C + ++V S ++D
Sbjct: 367 EECPEDDMEGVEDGEEGDL--KTSLAKHRI-GTKRH-RVCLEIPQEVSQSELFPKEDLSS 422
Query: 724 VRSDCNSSNSHKDPNKDQPSCSRVIEGTCSF 754
+ + + P + S R +E +F
Sbjct: 423 EQYEMTECPAALAPVRPTHSSVRQVEDGLTF 453
>UNIPROTKB|O75164 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IDA] [GO:0016577 "histone demethylation" evidence=IDA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070544 "histone
H3-K36 demethylation" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0019048 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0051864 PDB:2YBP PDB:2YBS PDBsum:2YBP
PDBsum:2YBS PDB:3U4S PDBsum:3U4S CTD:9682 EMBL:AB014577
EMBL:AL451062 EMBL:AC092815 EMBL:BC002558 IPI:IPI00005666
RefSeq:NP_055478.2 UniGene:Hs.155983 PDB:2GF7 PDB:2GFA PDB:2GP3
PDB:2GP5 PDB:2OQ6 PDB:2OQ7 PDB:2OS2 PDB:2OT7 PDB:2OX0 PDB:2P5B
PDB:2PXJ PDB:2Q8C PDB:2Q8D PDB:2Q8E PDB:2QQR PDB:2QQS PDB:2VD7
PDB:2WWJ PDB:2YBK PDB:3NJY PDB:3PDQ PDB:3RVH PDB:4AI9 PDB:4GD4
PDBsum:2GF7 PDBsum:2GFA PDBsum:2GP3 PDBsum:2GP5 PDBsum:2OQ6
PDBsum:2OQ7 PDBsum:2OS2 PDBsum:2OT7 PDBsum:2OX0 PDBsum:2P5B
PDBsum:2PXJ PDBsum:2Q8C PDBsum:2Q8D PDBsum:2Q8E PDBsum:2QQR
PDBsum:2QQS PDBsum:2VD7 PDBsum:2WWJ PDBsum:2YBK PDBsum:3NJY
PDBsum:3PDQ PDBsum:3RVH PDBsum:4AI9 PDBsum:4GD4
ProteinModelPortal:O75164 SMR:O75164 DIP:DIP-29372N IntAct:O75164
MINT:MINT-2829088 STRING:O75164 PhosphoSite:O75164 PRIDE:O75164
Ensembl:ENST00000372396 GeneID:9682 KEGG:hsa:9682 UCSC:uc001cjx.3
GeneCards:GC01P044115 H-InvDB:HIX0020610 HGNC:HGNC:22978
HPA:HPA007610 MIM:609764 neXtProt:NX_O75164 PharmGKB:PA164721403
HOGENOM:HOG000231125 InParanoid:O75164 KO:K06709 OMA:KRTAGCC
OrthoDB:EOG4QRH37 PhylomeDB:O75164 BindingDB:O75164
ChEMBL:CHEMBL5896 ChiTaRS:Kdm4A EvolutionaryTrace:O75164
GenomeRNAi:9682 NextBio:36361 ArrayExpress:O75164 Bgee:O75164
CleanEx:HS_JMJD2A Genevestigator:O75164 GermOnline:ENSG00000066135
Uniprot:O75164
Length = 1064
Score = 378 (138.1 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 78/188 (41%), Positives = 104/188 (55%)
Query: 245 WNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKI 304
WN+ L + V G I GV P+LY GM +SF WH ED LYS+NYLH+G+PK
Sbjct: 148 WNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKS 207
Query: 305 WYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEF 364
WY VP H LE+ + P + L +T +SP +LK G+P V Q +GEF
Sbjct: 208 WYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 267
Query: 365 VLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQ 424
++TFP YH+GFN GFNCAE+ N A W+ +G+QAV L S + +S D + Q
Sbjct: 268 MITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAV-LCSCRKDMVKISMD-VFVRKFQ 325
Query: 425 AAIKALWE 432
LW+
Sbjct: 326 PERYKLWK 333
Score = 99 (39.9 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
FYPT+EEF + YIA I S+ A G+ ++VPP W P
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKP 55
Score = 40 (19.1 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 600 SSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQV 656
S S + + G+G SR +SS+ SEP + ++V+S+ +G+ V
Sbjct: 502 SGSKKKSSSSLGSGS--SRDSISSDSETSEPLSCRAQGQTGVLTVHSYAKGDGRVTV 556
Score = 38 (18.4 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
Identities = 21/91 (23%), Positives = 36/91 (39%)
Query: 666 EVCIDLNMDVIPDGNESKLLLSDSHGKEAIENLKAHLSACYQ--EKVLCSGTVKEQDTMQ 723
E C + +M+ + DG E L S K I K H C + ++V S ++D
Sbjct: 367 EECPEEDMEGVEDGEEGDL--KTSLAKHRI-GTKRH-RVCLEIPQEVSQSELFPKEDLSS 422
Query: 724 VRSDCNSSNSHKDPNKDQPSCSRVIEGTCSF 754
+ + + P + S R +E +F
Sbjct: 423 EQYEMTECPAALAPVRPTHSSVRQVEDGLTF 453
>UNIPROTKB|E1C6D5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
EMBL:AADN02012723 EMBL:AADN02012724 IPI:IPI00586868
Ensembl:ENSGALT00000016376 Uniprot:E1C6D5
Length = 1017
Score = 386 (140.9 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 70/160 (43%), Positives = 97/160 (60%)
Query: 242 MSGWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGD 301
+ WN+ L + V G I GV P+LY GM +SF WH ED LYS+NYLH+G+
Sbjct: 145 VDAWNIGRLNTILDVVENESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGE 204
Query: 302 PKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHS 361
PK WY +P H LE+ + P + L +T +SPS+LK G+P V Q +
Sbjct: 205 PKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPSILKKYGIPFDKVTQEA 264
Query: 362 GEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAV 401
GEF++TFP +YH+GFN GFNCAE+ N A + W+ +G+Q+V
Sbjct: 265 GEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYGKQSV 304
Score = 89 (36.4 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
F PT+E+F D YIA + ++ A G+ +IVPP W P
Sbjct: 17 FRPTMEQFRDFSRYIAYVEAQGAHRAGLAKIVPPKEWKP 55
Score = 40 (19.1 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 708 EKVLCSGTVKEQDTMQVRSDCNSS--NSHKDPNKDQP 742
+K +G+V EQ+ +V + S S K + QP
Sbjct: 560 KKASATGSVNEQELAEVTKEYIQSMKESKKSKGRRQP 596
>UNIPROTKB|E2RFE0 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:AAEX03009807 EMBL:AAEX03009806 RefSeq:XP_851005.1
Ensembl:ENSCAFT00000007898 GeneID:482530 KEGG:cfa:482530
NextBio:20857109 Uniprot:E2RFE0
Length = 1066
Score = 379 (138.5 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 78/188 (41%), Positives = 104/188 (55%)
Query: 245 WNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKI 304
WN+ L + V G I GV P+LY GM +SF WH ED LYS+NYLH+G+PK
Sbjct: 148 WNIGRLKTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKS 207
Query: 305 WYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEF 364
WY VP H LE+ + P + L +T +SP +LK G+P V Q +GEF
Sbjct: 208 WYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 267
Query: 365 VLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQ 424
++TFP YH+GFN GFNCAE+ N A W+ +G+QAV L S + +S D + Q
Sbjct: 268 MITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAV-LCSCRKDMVKISMD-VFVRKFQ 325
Query: 425 AAIKALWE 432
LW+
Sbjct: 326 PERYKLWK 333
Score = 96 (38.9 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
FYPT+EEF + Y+A I S+ A G+ ++VPP W P
Sbjct: 17 FYPTMEEFRNFSRYMAYIESQGAHRAGLAKVVPPKEWKP 55
Score = 41 (19.5 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 613 GPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQVMNK 659
G SR +SS+ SEP + + ++V+S+ +G D VM +
Sbjct: 515 GSSSSRDSISSDSETSEPLSCRAQGQSGVLTVHSYAKG-DGRVVMGE 560
>FB|FBgn0036004 [details] [associations]
symbol:Jarid2 "Jumonji, AT rich interactive domain 2"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005719
"nuclear euchromatin" evidence=IDA] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0061085 "regulation of histone H3-K27
methylation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR017956 Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00384 SMART:SM00558 EMBL:AE014296
GO:GO:0003677 GO:GO:0035098 GO:GO:0005719 GO:GO:0005700
Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q24573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0061085 CTD:3720
KO:K11478 GeneTree:ENSGT00530000063118 FlyBase:FBgn0036004
RefSeq:NP_648324.1 UniGene:Dm.29618 ProteinModelPortal:Q9VT00
SMR:Q9VT00 MINT:MINT-1562739 STRING:Q9VT00
EnsemblMetazoa:FBtr0076468 GeneID:39103 KEGG:dme:Dmel_CG3654
UCSC:CG3654-RD InParanoid:Q9VT00 OMA:HESCEPA PhylomeDB:Q9VT00
GenomeRNAi:39103 NextBio:811931 ArrayExpress:Q9VT00 Bgee:Q9VT00
Uniprot:Q9VT00
Length = 2351
Score = 354 (129.7 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 102/373 (27%), Positives = 166/373 (44%)
Query: 184 KRLEPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMS 243
K +P+V ++E E+WR + V V+ G+ +++ + GFP G S+ YA
Sbjct: 1982 KSTDPTVNEVEAEFWRHVAVRDSHVCVHSGS-IDSSGWGYGFPSPGPKGKGSN---YARH 2037
Query: 244 GWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPK 303
WNL L GSVL G + GV VP L+VGM FS+ CW+ + H L + YLH G K
Sbjct: 2038 PWNLKVLTNNSGSVLRSLGP-VMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASK 2096
Query: 304 IWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGE 363
+WYG+P ++ A+ +P + + L + P +L GV + + Q GE
Sbjct: 2097 LWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGE 2156
Query: 364 FVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFG-S 422
F++ FPRAY S G+ +E+V A + WL + E S ++LLF
Sbjct: 2157 FIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALG 2216
Query: 423 VQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQK 482
+ + L + P D C K+ + ++ E +Q K +K
Sbjct: 2217 YDQRVNS----EALHQMLP---MLNDVCEKESAAREQLRAAGVTSTEKVQAEKGQ-KAKK 2268
Query: 483 MEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHA--NIFC-SCEIDHRFVILRY 539
+ E EC C +L++S + CL+HA N+ + + +I Y
Sbjct: 2269 QQQPPYKSIESECDLCRANLYISMV--RTEDGNIYCLQHALKNLNNGNIQAKQCKLIYAY 2326
Query: 540 STDELNTLVEALE 552
+ D++ L+ L+
Sbjct: 2327 NVDDIQQLIRQLQ 2339
Score = 126 (49.4 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPC 74
EAP+F PT +EF D + +I +I A FGIC+I+PP+S+ P C
Sbjct: 1740 EAPIFRPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPEC 1783
>FB|FBgn0053182 [details] [associations]
symbol:Kdm4B "Histone demethylase 4B" species:7227
"Drosophila melanogaster" [GO:0016577 "histone demethylation"
evidence=ISS] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=ISS;IDA;IMP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IDA;IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IDA;IMP] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 EMBL:AE013599 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0006351 GO:GO:0016702
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 KO:K06709 RefSeq:NP_001163137.1 RefSeq:NP_001163138.1
RefSeq:NP_001163139.1 RefSeq:NP_788344.2 UniGene:Dm.6975
ProteinModelPortal:Q9V6L0 SMR:Q9V6L0 PaxDb:Q9V6L0
EnsemblMetazoa:FBtr0087770 EnsemblMetazoa:FBtr0302052
EnsemblMetazoa:FBtr0302053 EnsemblMetazoa:FBtr0302054 GeneID:318918
KEGG:dme:Dmel_CG33182 UCSC:CG33182-RA CTD:23030 FlyBase:FBgn0053182
InParanoid:Q9V6L0 OMA:MERWIEY OrthoDB:EOG4NVX19 PhylomeDB:Q9V6L0
GenomeRNAi:318918 NextBio:846567 GermOnline:CG33182 Uniprot:Q9V6L0
Length = 590
Score = 363 (132.8 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
Identities = 73/175 (41%), Positives = 102/175 (58%)
Query: 232 GTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSD----ISGVLVPWLYVGMCFSSFCWHVE 287
G+ +D DQ WN+N L G++L + D I GV +LY GM ++F WH E
Sbjct: 136 GSITDTDQ---DSWNINRL----GTILDYVNKDYNIQIDGVNTAYLYFGMWKTTFAWHTE 188
Query: 288 DHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVL 347
D LYS+NYLH+G PK WY VP LEK ++ P ++ L +T +SP +L
Sbjct: 189 DMDLYSINYLHFGAPKTWYVVPPECGRKLEKVANQYFPASYKNCNAYLRHKMTLISPQIL 248
Query: 348 KAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVE 402
K VPV + Q +GE ++TFP YH+GFN GFNCAE+ N A W+ +G++AV+
Sbjct: 249 KQHDVPVSKITQEAGEIMITFPFGYHAGFNHGFNCAESTNFAMERWIEYGKRAVQ 303
Score = 92 (37.4 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 34 VFYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
VF PT EEF+D Y+A + S+ A G+ ++VPP W P
Sbjct: 11 VFRPTWEEFKDFPKYVAYMESQGAHKAGLAKVVPPPEWVP 50
>UNIPROTKB|E1BX38 [details] [associations]
symbol:Gga.52669 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AADN02062013
IPI:IPI00735114 Ensembl:ENSGALT00000006511 ArrayExpress:E1BX38
Uniprot:E1BX38
Length = 1095
Score = 380 (138.8 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 78/197 (39%), Positives = 110/197 (55%)
Query: 206 DEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDI 265
+++E Y +L F S A G+ D D + WN+ NL L V G I
Sbjct: 116 EDLERKYWKNL---TFVSPIYGADISGSLYDTD---VEEWNIGNLNTLLDMVEHECGIII 169
Query: 266 SGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLP 325
GV P+LY GM ++F WH ED LYS+NYLH+G+PK WY +P H LE+ + P
Sbjct: 170 EGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFP 229
Query: 326 DLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEA 385
+ L +T +SPS+LK G+P + Q +GEF++TFP YH+GFN GFNCAE+
Sbjct: 230 GSSQGCDAFLRHKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAES 289
Query: 386 VNVAPVDWLAHGQQAVE 402
N A + W+ +G+ A +
Sbjct: 290 TNFATLRWIDYGKMATQ 306
Score = 87 (35.7 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
F PT+EEF + Y+A I S+ A G+ +++PP W P
Sbjct: 18 FRPTLEEFREFGKYVAYIESQGAHRAGLAKVIPPKEWKP 56
>ZFIN|ZDB-GENE-120215-3 [details] [associations]
symbol:si:ch211-215f22.3 "si:ch211-215f22.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-120215-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX119315 RefSeq:XP_001921829.2
Ensembl:ENSDART00000151359 GeneID:100003413 KEGG:dre:100003413
Bgee:I3ITH4 Uniprot:I3ITH4
Length = 2012
Score = 369 (135.0 bits), Expect = 4.4e-35, Sum P(3) = 4.4e-35
Identities = 75/188 (39%), Positives = 103/188 (54%)
Query: 245 WNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKI 304
WN+ L + V G I GV P+LY GM S+F WH ED LYS+NYLH+G+PK
Sbjct: 151 WNIGRLNTILDMVERESGITIKGVNTPYLYFGMWKSTFAWHTEDMDLYSINYLHFGEPKS 210
Query: 305 WYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEF 364
WY VP H LE+ + P + L +T +SPS+L+ G+P V Q +G+F
Sbjct: 211 WYVVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPSILRKYGIPFEKVTQEAGQF 270
Query: 365 VLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQ 424
++TFP YH+GFN GFNCAE+ N A W+ +G+ A L S + +S D + Q
Sbjct: 271 IVTFPYGYHAGFNHGFNCAESTNFATQRWIDYGKLAT-LCSCRKDMVKISMDVFVH-KFQ 328
Query: 425 AAIKALWE 432
LW+
Sbjct: 329 PERYKLWK 336
Score = 94 (38.1 bits), Expect = 4.4e-35, Sum P(3) = 4.4e-35
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTRIQQ 93
F+PT EEF+D YIA + S+ A G+ ++VPP W P + + E+ T IQQ
Sbjct: 20 FHPTKEEFKDFNRYIAYMESQGAHRAGMAKVVPPKDWKPR---RTYDDIEDLVIPTPIQQ 76
Query: 94 I 94
+
Sbjct: 77 V 77
Score = 61 (26.5 bits), Expect = 4.4e-35, Sum P(3) = 4.4e-35
Identities = 46/215 (21%), Positives = 92/215 (42%)
Query: 572 SDTDGGLVKMDMESEVFPMDCCEQKESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQ 631
++TD G + D ++E F + ++ES + + E VE + S S ++ S P+
Sbjct: 388 ANTDDG--EED-KAEAFS-EKVVKRESDAGKEKAEAEVEKSVRDEEPSSTSEQISSSSPK 443
Query: 632 RGTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIPDGNESKLLLSDSHG 691
+ T + ++ NE D+ QV + +V+ + L + D NE + + ++
Sbjct: 444 QNTG---QKRLRSSTDNEAKDDNQVKIEVEEVEKKKA-KLGQNET-DNNEEQSVSAEPDD 498
Query: 692 KEAIENLKAHL-----SACYQEKVLCSGTVKEQD-TMQVRSDCNS--SNSHKDPNK-DQP 742
++A E ++ C + ++ S D T Q R + +S ++S + N D+
Sbjct: 499 EKAEETMETDTPPPQQQECMEAELSTSDPTSSSDITTQQREEESSDVTSSTQSINSVDED 558
Query: 743 SCSRVIEGTCSFDVKKLFGVDLSLPHQQSKLPLVD 777
+ S DV + F V ++ P + L D
Sbjct: 559 VALGGDVASQSEDVTQSFVVQIN-PEDITPTDLTD 592
Score = 55 (24.4 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 50/226 (22%), Positives = 92/226 (40%)
Query: 537 LRYSTDELNTLVEALEGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK 596
LR STD N + + ++ ++E+ K K ++TD + + +E E
Sbjct: 451 LRSSTD--NEAKDDNQVKIE-VEEVEKKKAKLGQ-NETDNN-EEQSVSAEPDDEKAEETM 505
Query: 597 ESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNE----GND 652
E+ + P+ + +E S SS++ + + +S +++S S+NS +E G D
Sbjct: 506 ETDTPPPQQQECMEAE-LSTSDPTSSSDITTQQREEESSDVTSSTQSINSVDEDVALGGD 564
Query: 653 ETQVMNKKAKVKHEVCIDLNM-DVIP----DGNESKLLL----SD----SHGKEAIENLK 699
V ++ V + +N D+ P D S + SD S + N
Sbjct: 565 ---VASQSEDVTQSFVVQINPEDITPTDLTDAQPSNITSHPCSSDIPATSFMSVSSSNFS 621
Query: 700 AH-LSACYQEKVLCSGTVKEQDTMQVRSDCNSSN-SHKDPNKDQPS 743
H +S Y C GT + D++ + S N +H + +PS
Sbjct: 622 KHSISFAYT----CDGTTEPSDSINLTPRVPSINVAHISDVQPEPS 663
Score = 45 (20.9 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 48/236 (20%), Positives = 97/236 (41%)
Query: 582 DMESEVFPMDCCEQKESSSSSPRVENIVE--GNGPCCSRSHVS---SEV--VQSEPQRGT 634
+++SE + ++ESS +S +++N+ N S+ S +++ VQSEP
Sbjct: 968 NVQSEPSDISIGSKQESSINSAQIDNVQSEPSNISISSKQETSINSTQIDDVQSEPS-DI 1026
Query: 635 SGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVCI-DLNMDVIPDGNESKLLLSDSHGKE 693
S S + + +NS + ++ + E I +D + S + +S H +
Sbjct: 1027 SISSKNKLRINSAQIDDVQSAPSGISVSSEQETSIISAQVDDV-QSEYSDISISSKH-EP 1084
Query: 694 AIENLKAHLSACYQEKVLCSGTVKEQDTMQVRSDCNSSNSHKDPNKDQPSCSRVIEGTCS 753
+I + + E + S K++ + NS+ + D + S S
Sbjct: 1085 SINSTQT--DDIQSEPIDISFGSKQESCI------NSAQMY-DVQSEPSDISISSTQETS 1135
Query: 754 FDVKKLFGVDLSLPHQQSKLPLVDFLKTDTINGS---NVRTSVTDQRFQKKLETCV 806
+ +++ V L P S + F +IN S +V++ +D F + ETC+
Sbjct: 1136 INSAQMYDVQLE-PSDIS----ISFKDKPSINSSQVDDVQSEPSDICFGSEQETCI 1186
Score = 43 (20.2 bits), Expect = 3.3e-33, Sum P(3) = 3.3e-33
Identities = 27/128 (21%), Positives = 52/128 (40%)
Query: 614 PCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVCIDLNM 673
P + +H S VQ EP S ++ H+ + +E ND ++N K ++ ++
Sbjct: 768 PGVNFAHTSD--VQPEPSECESCTNSDHIC-DVQSEANDI--IINSKDEMSINSAHTFDV 822
Query: 674 DVIPDGNESKLL----LSDSHGKEAIENLKAHLSACYQEKVLCSGTVKEQDTMQVRSDCN 729
P N L +S + G + + + ++ + + T V+S+ N
Sbjct: 823 QPEPSDNTVSLTHKPDISSTSGSD-VPSGPGDIT----DSLGYDPDFNSTHTGHVQSESN 877
Query: 730 SSNSHKDP 737
+S HK P
Sbjct: 878 NSPKHKLP 885
>UNIPROTKB|E1BA41 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 KO:K06709 CTD:23030
OMA:QTEKEAP EMBL:DAAA02019590 EMBL:DAAA02019591 EMBL:DAAA02019592
IPI:IPI00689692 RefSeq:XP_002688966.2 RefSeq:XP_584880.4
Ensembl:ENSBTAT00000020586 GeneID:508141 KEGG:bta:508141
Uniprot:E1BA41
Length = 1116
Score = 372 (136.0 bits), Expect = 5.5e-35, Sum P(2) = 5.5e-35
Identities = 77/197 (39%), Positives = 110/197 (55%)
Query: 206 DEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDI 265
D++E Y +L F S A G+ D D ++ WN+ NL + V G+ I
Sbjct: 116 DDLERKYWKNL---TFVSPIYGADISGSLYDDD---VAQWNIGNLRTILDMVERECGTII 169
Query: 266 SGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLP 325
GV P+LY GM ++F WH ED LYS+NYLH+G+PK WY +P H LE+ P
Sbjct: 170 EGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFP 229
Query: 326 DLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEA 385
+ L +T +SP +LK G+P + Q +GEF++TFP YH+GFN GFNCAE+
Sbjct: 230 GSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAES 289
Query: 386 VNVAPVDWLAHGQQAVE 402
N A + W+ +G+ A +
Sbjct: 290 TNFATLRWIDYGKVATQ 306
Score = 94 (38.1 bits), Expect = 5.5e-35, Sum P(2) = 5.5e-35
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
F PT+EEF+D Y+A I S+ A G+ +I+PP W P
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKP 56
>ZFIN|ZDB-GENE-070209-38 [details] [associations]
symbol:zgc:153957 "zgc:153957" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
ZFIN:ZDB-GENE-070209-38 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:CU468286 IPI:IPI00493629
Ensembl:ENSDART00000087729 ArrayExpress:F1QPD2 Bgee:F1QPD2
Uniprot:F1QPD2
Length = 1482
Score = 378 (138.1 bits), Expect = 9.2e-35, Sum P(3) = 9.2e-35
Identities = 78/197 (39%), Positives = 110/197 (55%)
Query: 206 DEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDI 265
+++E Y +L F S A GT D D + WN+ +L + + G I
Sbjct: 117 EDLERKYWKNL---TFVSPIYGADVSGTLYDED---IEEWNIGHLNSVLDVIEEDCGVSI 170
Query: 266 SGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLP 325
GV P+LY GM +SF WH ED LYS+NYLH+G+PK WY +P H LE+ P
Sbjct: 171 QGVNTPYLYFGMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFP 230
Query: 326 DLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEA 385
+ F+ L +T +SPSVLK +P + Q +GEF++TFP YH+GFN GFNCAE+
Sbjct: 231 NSFKSCEAFLRHKMTLISPSVLKKYSIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAES 290
Query: 386 VNVAPVDWLAHGQQAVE 402
N A + W+ +G+ A +
Sbjct: 291 TNFASIRWIDYGKLATQ 307
Score = 85 (35.0 bits), Expect = 9.2e-35, Sum P(3) = 9.2e-35
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
F PT+EEF+D Y+ + S+ A G+ +++PP W P
Sbjct: 19 FRPTMEEFKDFNQYLVYMESQGAHRAGLAKVIPPKGWKP 57
Score = 52 (23.4 bits), Expect = 9.2e-35, Sum P(3) = 9.2e-35
Identities = 21/108 (19%), Positives = 47/108 (43%)
Query: 622 SSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVC--IDLNMDVIPDG 679
++ QSEP+ + V++ S + Q +N ++ V + I + +
Sbjct: 499 TNSTAQSEPESTSESDIIVDVTLGSERTAENPNQTLNCES-VSETIAPSIPVTHSLTLHS 557
Query: 680 NESKLLLSDSHGKEA-IENLKAHLSACYQEKVLC--SGTVKEQDTMQV 724
+ +L S+S ++A IE + + ++ + C S KEQ ++ +
Sbjct: 558 TGATVLFSESDSQQAKIETEETVIDTLTEDSIDCGTSALYKEQSSISL 605
Score = 44 (20.5 bits), Expect = 6.2e-34, Sum P(3) = 6.2e-34
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 571 CSDTD-GGLVKMDMESE---VFPMDCCEQKESSSS 601
CSDT+ +D++ E V P + CE E + S
Sbjct: 892 CSDTEVSENAPLDLKQENEEVEPAESCELNEQAGS 926
>MGI|MGI:2442355 [details] [associations]
symbol:Kdm4b "lysine (K)-specific demethylase 4B"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 MGI:MGI:2442355
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000231125
KO:K06709 CTD:23030 OrthoDB:EOG4N5VW5 ChiTaRS:KDM4B EMBL:AK129233
EMBL:AK141879 EMBL:BC005480 EMBL:BC007145 IPI:IPI00127444
IPI:IPI00460708 RefSeq:NP_742144.1 UniGene:Mm.45047
ProteinModelPortal:Q91VY5 SMR:Q91VY5 STRING:Q91VY5
PhosphoSite:Q91VY5 PRIDE:Q91VY5 Ensembl:ENSMUST00000025036
GeneID:193796 KEGG:mmu:193796 UCSC:uc008dbu.2 InParanoid:Q91VY5
OMA:QRTRPLI NextBio:371516 Bgee:Q91VY5 CleanEx:MM_JMJD2B
Genevestigator:Q91VY5 GermOnline:ENSMUSG00000024201 Uniprot:Q91VY5
Length = 1086
Score = 372 (136.0 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 77/197 (39%), Positives = 110/197 (55%)
Query: 206 DEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDI 265
D++E Y +L F S A G+ D D ++ WN+ NL + V G+ I
Sbjct: 116 DDLERKYWKNL---TFVSPIYGADISGSLYDDD---VAQWNIGNLRTILDMVERECGTII 169
Query: 266 SGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLP 325
GV P+LY GM ++F WH ED LYS+NYLH+G+PK WY +P H LE+ P
Sbjct: 170 EGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFP 229
Query: 326 DLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEA 385
+ L +T +SP +LK G+P + Q +GEF++TFP YH+GFN GFNCAE+
Sbjct: 230 GSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAES 289
Query: 386 VNVAPVDWLAHGQQAVE 402
N A + W+ +G+ A +
Sbjct: 290 TNFATLRWIDYGKVATQ 306
Score = 90 (36.7 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
F PT++EF D Y+A I S+ A G+ +I+PP W P
Sbjct: 18 FRPTMDEFRDFNRYVAYIESQGAHRAGLAKIIPPKEWKP 56
>UNIPROTKB|O94953 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 EMBL:CH471139 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 KO:K06709 CTD:23030 EMBL:AB020683 EMBL:AC005595
EMBL:AC022517 EMBL:BC063889 EMBL:BC136611 EMBL:AL133622
IPI:IPI00013205 IPI:IPI00440491 PIR:T43460 RefSeq:NP_055830.1
UniGene:Hs.654816 ProteinModelPortal:O94953 SMR:O94953
DIP:DIP-47283N IntAct:O94953 MINT:MINT-1427202 STRING:O94953
PhosphoSite:O94953 PaxDb:O94953 PRIDE:O94953
Ensembl:ENST00000159111 Ensembl:ENST00000381759 GeneID:23030
KEGG:hsa:23030 UCSC:uc002mbq.4 UCSC:uc010xil.1
GeneCards:GC19P004969 HGNC:HGNC:29136 MIM:609765 neXtProt:NX_O94953
PharmGKB:PA164721452 InParanoid:O94953 OrthoDB:EOG4N5VW5
PhylomeDB:O94953 ChiTaRS:KDM4B GenomeRNAi:23030 NextBio:44006
ArrayExpress:O94953 Bgee:O94953 CleanEx:HS_JMJD2B
Genevestigator:O94953 Uniprot:O94953
Length = 1096
Score = 367 (134.2 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 76/197 (38%), Positives = 110/197 (55%)
Query: 206 DEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDI 265
D++E Y +L F S A G+ D D ++ WN+ +L + V G+ I
Sbjct: 116 DDLERKYWKNL---TFVSPIYGADISGSLYDDD---VAQWNIGSLRTILDMVERECGTII 169
Query: 266 SGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLP 325
GV P+LY GM ++F WH ED LYS+NYLH+G+PK WY +P H LE+ P
Sbjct: 170 EGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFP 229
Query: 326 DLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEA 385
+ L +T +SP +LK G+P + Q +GEF++TFP YH+GFN GFNCAE+
Sbjct: 230 GSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAES 289
Query: 386 VNVAPVDWLAHGQQAVE 402
N A + W+ +G+ A +
Sbjct: 290 TNFATLRWIDYGKVATQ 306
Score = 94 (38.1 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
F PT+EEF+D Y+A I S+ A G+ +I+PP W P
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKP 56
>UNIPROTKB|F5GX28 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AC005595
EMBL:AC022517 HGNC:HGNC:29136 ChiTaRS:KDM4B EMBL:AC053467
EMBL:AC093033 EMBL:AC104520 IPI:IPI00922876
ProteinModelPortal:F5GX28 SMR:F5GX28 Ensembl:ENST00000536461
UCSC:uc010xim.2 OMA:QTEKEAP ArrayExpress:F5GX28 Bgee:F5GX28
Uniprot:F5GX28
Length = 1130
Score = 367 (134.2 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 76/197 (38%), Positives = 110/197 (55%)
Query: 206 DEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDI 265
D++E Y +L F S A G+ D D ++ WN+ +L + V G+ I
Sbjct: 116 DDLERKYWKNL---TFVSPIYGADISGSLYDDD---VAQWNIGSLRTILDMVERECGTII 169
Query: 266 SGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLP 325
GV P+LY GM ++F WH ED LYS+NYLH+G+PK WY +P H LE+ P
Sbjct: 170 EGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFP 229
Query: 326 DLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEA 385
+ L +T +SP +LK G+P + Q +GEF++TFP YH+GFN GFNCAE+
Sbjct: 230 GSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAES 289
Query: 386 VNVAPVDWLAHGQQAVE 402
N A + W+ +G+ A +
Sbjct: 290 TNFATLRWIDYGKVATQ 306
Score = 94 (38.1 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
F PT+EEF+D Y+A I S+ A G+ +I+PP W P
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKP 56
>UNIPROTKB|E2R243 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AAEX03012537
EMBL:AAEX03012538 EMBL:AAEX03012539 Ensembl:ENSCAFT00000030040
Uniprot:E2R243
Length = 1133
Score = 367 (134.2 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 76/197 (38%), Positives = 110/197 (55%)
Query: 206 DEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDI 265
D++E Y +L F S A G+ D D ++ WN+ +L + V G+ I
Sbjct: 116 DDLERKYWKNL---TFVSPIYGADISGSLYDDD---VAQWNIGSLRTILDMVERECGTII 169
Query: 266 SGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLP 325
GV P+LY GM ++F WH ED LYS+NYLH+G+PK WY +P H LE+ P
Sbjct: 170 EGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFP 229
Query: 326 DLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEA 385
+ L +T +SP +LK G+P + Q +GEF++TFP YH+GFN GFNCAE+
Sbjct: 230 GSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAES 289
Query: 386 VNVAPVDWLAHGQQAVE 402
N A + W+ +G+ A +
Sbjct: 290 TNFATLRWIDYGKVATQ 306
Score = 94 (38.1 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
F PT+EEF+D Y+A I S+ A G+ +I+PP W P
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKP 56
>UNIPROTKB|F1SMN9 [details] [associations]
symbol:F1SMN9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 OMA:DIIQGER
EMBL:AEMK01181236 EMBL:AEMK01189766 EMBL:CU137711 EMBL:CU481460
EMBL:CU571047 Ensembl:ENSSSCT00000005730 Uniprot:F1SMN9
Length = 1057
Score = 372 (136.0 bits), Expect = 5.1e-34, Sum P(2) = 5.1e-34
Identities = 76/197 (38%), Positives = 111/197 (56%)
Query: 245 WNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKI 304
WN+ L + V G I GV P+LY GM ++F WH ED LYS+NYLH+G+PK
Sbjct: 150 WNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 209
Query: 305 WYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEF 364
WY +P H LE+ + P + L +T +SPSVLK G+P + Q +GEF
Sbjct: 210 WYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEF 269
Query: 365 VLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQA-VELYSEQHRKTSLSHDKLLFGS- 422
++TFP YH+GFN GFNCAE+ N A V W+ +G+ A + + ++ K +L +FG+
Sbjct: 270 MITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVAKLTMCFTEYVKLTLD----IFGAE 325
Query: 423 VQAAIKALWELSVLQKK 439
+ LW +V ++
Sbjct: 326 ILREAYQLWNSNVFLRR 342
Score = 84 (34.6 bits), Expect = 5.1e-34, Sum P(2) = 5.1e-34
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
F P++EEF + Y+A + SK A G+ +++PP W P
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKP 57
>ZFIN|ZDB-GENE-060503-664 [details] [associations]
symbol:kdm4b "lysine (K)-specific demethylase 4B"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-060503-664
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
HOGENOM:HOG000231125 KO:K06709 HOVERGEN:HBG080483 CTD:23030
OrthoDB:EOG4N5VW5 EMBL:BX927276 OMA:QTEKEAP EMBL:BC171698
EMBL:BC171700 IPI:IPI00775179 RefSeq:NP_001076274.1
UniGene:Dr.81759 SMR:Q1LUQ0 Ensembl:ENSDART00000034084
Ensembl:ENSDART00000128161 GeneID:556504 KEGG:dre:556504
InParanoid:Q1LUQ0 NextBio:20881518 Uniprot:Q1LUQ0
Length = 1134
Score = 371 (135.7 bits), Expect = 8.1e-34, Sum P(3) = 8.1e-34
Identities = 78/197 (39%), Positives = 108/197 (54%)
Query: 206 DEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDI 265
D++E Y +L F S A G+ D D +S WN+ +L L V G I
Sbjct: 196 DDLERKYWKNL---TFVSPIYGADISGSLYDPD---ISEWNIGHLNTLLDMVEQECGIVI 249
Query: 266 SGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLP 325
GV P+LY GM ++F WH ED LYS+NYLH+G PK WY +P H LE+ + P
Sbjct: 250 EGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGKPKSWYAIPPEHGKRLERLAQGFFP 309
Query: 326 DLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEA 385
+ L +T +SPS+LK +P + Q GEF++TFP YH+GFN GFNCAE+
Sbjct: 310 GSSQGCDAFLRHKMTLISPSILKKYSIPFDRITQEEGEFMITFPYGYHAGFNHGFNCAES 369
Query: 386 VNVAPVDWLAHGQQAVE 402
N A + W+ +G+ A +
Sbjct: 370 TNFATLRWIDYGKMAAQ 386
Score = 87 (35.7 bits), Expect = 8.1e-34, Sum P(3) = 8.1e-34
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 21 PAEACRP--IIDEAPVFYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
PA A P ++ F PT+EEF+D YIA + ++ A G+ +++PP W P
Sbjct: 82 PAPAPPPGANFNKIMTFRPTMEEFKDFGKYIAYMETQGAHVAGLAKVIPPKEWKP 136
Score = 43 (20.2 bits), Expect = 8.1e-34, Sum P(3) = 8.1e-34
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 637 LSASHVSVNSHN----EGNDETQVMNKKAKV 663
L+AS++ + H E DETQ++ K++++
Sbjct: 980 LNASYIKEHVHRYYQVEFQDETQLLLKRSEI 1010
>RGD|1307528 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C" species:10116
"Rattus norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=ISO] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 RGD:1307528 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0000790 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0032454 IPI:IPI00959259
Ensembl:ENSRNOT00000009083 UCSC:RGD:1307528 ArrayExpress:F1LS62
Uniprot:F1LS62
Length = 1053
Score = 368 (134.6 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 69/156 (44%), Positives = 93/156 (59%)
Query: 245 WNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKI 304
WN+ L + V G I GV P+LY GM ++F WH ED LYS+NYLH+G+PK
Sbjct: 150 WNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 209
Query: 305 WYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEF 364
WY +P H LE+ + P + L +T +SPSVLK G+P + Q +GEF
Sbjct: 210 WYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEF 269
Query: 365 VLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQA 400
++TFP YH+GFN GFNCAE+ N A V W+ +G+ A
Sbjct: 270 MITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVA 305
Score = 84 (34.6 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
F P++EEF + Y+A + SK A G+ +++PP W P
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKP 57
>MGI|MGI:1924054 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=ISO;IPI]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
MGI:MGI:1924054 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
GO:GO:0006357 GO:GO:0006351 GO:GO:0000790 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
CTD:23081 OMA:DIIQGER EMBL:AK173023 EMBL:AK053104 EMBL:AK081769
EMBL:AK144103 EMBL:BC020180 EMBL:BC042424 IPI:IPI00470006
RefSeq:NP_001165566.1 RefSeq:NP_659036.1 UniGene:Mm.209059
ProteinModelPortal:Q8VCD7 SMR:Q8VCD7 STRING:Q8VCD7
PhosphoSite:Q8VCD7 PRIDE:Q8VCD7 Ensembl:ENSMUST00000030102
Ensembl:ENSMUST00000077851 GeneID:76804 KEGG:mmu:76804
UCSC:uc008tjj.2 InParanoid:Q8VCD7 NextBio:345851 Bgee:Q8VCD7
CleanEx:MM_JMJD2C Genevestigator:Q8VCD7
GermOnline:ENSMUSG00000028397 Uniprot:Q8VCD7
Length = 1054
Score = 368 (134.6 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 69/156 (44%), Positives = 93/156 (59%)
Query: 245 WNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKI 304
WN+ L + V G I GV P+LY GM ++F WH ED LYS+NYLH+G+PK
Sbjct: 150 WNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 209
Query: 305 WYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEF 364
WY +P H LE+ + P + L +T +SPSVLK G+P + Q +GEF
Sbjct: 210 WYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEF 269
Query: 365 VLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQA 400
++TFP YH+GFN GFNCAE+ N A V W+ +G+ A
Sbjct: 270 MITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVA 305
Score = 84 (34.6 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
F P++EEF + Y+A + SK A G+ +++PP W P
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKP 57
>UNIPROTKB|Q9H3R0 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=IMP;IDA] [GO:0033169 "histone H3-K9
demethylation" evidence=IMP;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0050681 "androgen receptor binding" evidence=IPI]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0000790
GO:GO:0016702 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 Pathway_Interaction_DB:ar_pathway
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
EMBL:AB037901 EMBL:AB018323 EMBL:AK304032 EMBL:AL354707
EMBL:AL137020 EMBL:AL161443 EMBL:AL445592 EMBL:AL513412
EMBL:BC104859 EMBL:BC104861 EMBL:BC143571 IPI:IPI00027642
IPI:IPI00645825 IPI:IPI00878778 RefSeq:NP_001140166.1
RefSeq:NP_001140167.1 RefSeq:NP_001140168.1 RefSeq:NP_055876.2
UniGene:Hs.709425 PDB:2XDP PDB:2XML PDBsum:2XDP PDBsum:2XML
ProteinModelPortal:Q9H3R0 SMR:Q9H3R0 IntAct:Q9H3R0 STRING:Q9H3R0
PhosphoSite:Q9H3R0 DMDM:97536525 PaxDb:Q9H3R0 PRIDE:Q9H3R0
Ensembl:ENST00000381306 Ensembl:ENST00000381309
Ensembl:ENST00000420847 Ensembl:ENST00000543771 GeneID:23081
KEGG:hsa:23081 UCSC:uc003zkg.3 UCSC:uc003zkh.3 CTD:23081
GeneCards:GC09P006720 H-InvDB:HIX0017555 HGNC:HGNC:17071 MIM:605469
neXtProt:NX_Q9H3R0 PharmGKB:PA164721503 InParanoid:Q9H3R0
OMA:DIIQGER PhylomeDB:Q9H3R0 BindingDB:Q9H3R0 ChEMBL:CHEMBL6175
ChiTaRS:KDM4C EvolutionaryTrace:Q9H3R0 GenomeRNAi:23081
NextBio:44205 ArrayExpress:Q9H3R0 Bgee:Q9H3R0 CleanEx:HS_JMJD2C
Genevestigator:Q9H3R0 GermOnline:ENSG00000107077 Uniprot:Q9H3R0
Length = 1056
Score = 368 (134.6 bits), Expect = 8.1e-33, Sum P(3) = 8.1e-33
Identities = 69/156 (44%), Positives = 93/156 (59%)
Query: 245 WNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKI 304
WN+ L + V G I GV P+LY GM ++F WH ED LYS+NYLH+G+PK
Sbjct: 150 WNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 209
Query: 305 WYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEF 364
WY +P H LE+ + P + L +T +SPSVLK G+P + Q +GEF
Sbjct: 210 WYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEF 269
Query: 365 VLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQA 400
++TFP YH+GFN GFNCAE+ N A V W+ +G+ A
Sbjct: 270 MITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVA 305
Score = 84 (34.6 bits), Expect = 8.1e-33, Sum P(3) = 8.1e-33
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
F P++EEF + Y+A + SK A G+ +++PP W P
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKP 57
Score = 38 (18.4 bits), Expect = 8.1e-33, Sum P(3) = 8.1e-33
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 778 FLKTDTINGSNVRTSVTDQRFQKKLETCVEPI 809
F D I G R V RF K E +P+
Sbjct: 1010 FYGADIIQGERKRQRVLSSRF--KNEYVADPV 1039
>UNIPROTKB|F1PHR7 [details] [associations]
symbol:KDM4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AAEX03007833 EMBL:AAEX03007834 EMBL:AAEX03007835
Ensembl:ENSCAFT00000002249 Uniprot:F1PHR7
Length = 1053
Score = 368 (134.6 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 69/156 (44%), Positives = 93/156 (59%)
Query: 245 WNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKI 304
WN+ L + V G I GV P+LY GM ++F WH ED LYS+NYLH+G+PK
Sbjct: 150 WNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 209
Query: 305 WYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEF 364
WY +P H LE+ + P + L +T +SPSVLK G+P + Q +GEF
Sbjct: 210 WYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEF 269
Query: 365 VLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQA 400
++TFP YH+GFN GFNCAE+ N A V W+ +G+ A
Sbjct: 270 MITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVA 305
Score = 82 (33.9 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
F P++EEF + Y+A + SK A G+ +++PP W P
Sbjct: 19 FRPSMEEFREFNKYLAFMESKGAHRAGLAKVIPPREWKP 57
Score = 38 (18.4 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 728 CNSSNSHKDPNKDQPSCSRVIEGTCS 753
C S+S + N++ S +EG S
Sbjct: 375 CTGSHSKRLKNEEDEEVSPAVEGAQS 400
>FB|FBgn0033233 [details] [associations]
symbol:Kdm4A "Histone demethylase 4A" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0016577 "histone demethylation" evidence=ISS] [GO:0051864
"histone demethylase activity (H3-K36 specific)"
evidence=ISS;IDA;IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IMP] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:AE013599 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0006351 GO:GO:0016702 GO:GO:0010628
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 EMBL:AY058636 RefSeq:NP_610331.1 UniGene:Dm.4139
ProteinModelPortal:Q9V333 SMR:Q9V333 MINT:MINT-800097 STRING:Q9V333
PaxDb:Q9V333 PRIDE:Q9V333 EnsemblMetazoa:FBtr0088886 GeneID:35744
KEGG:dme:Dmel_CG15835 UCSC:CG15835-RA CTD:9682 FlyBase:FBgn0033233
InParanoid:Q9V333 OMA:FASKRWI OrthoDB:EOG46T1GM PhylomeDB:Q9V333
GenomeRNAi:35744 NextBio:795007 Bgee:Q9V333 GermOnline:CG15835
Uniprot:Q9V333
Length = 495
Score = 340 (124.7 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 72/195 (36%), Positives = 105/195 (53%)
Query: 206 DEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDI 265
D++E Y ++ + S A G+ SD D + WN+ L + V I
Sbjct: 122 DDLERKYWKNI---TYISPLYAADVKGSLSDED---LDVWNIGRLDTILNLVNTDYNIII 175
Query: 266 SGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLP 325
GV +LY GM SSF WH ED LYS+NYLH+G PK WY +P ++ LEK +
Sbjct: 176 DGVNTAYLYFGMWKSSFAWHTEDMDLYSINYLHFGAPKTWYAIPPAYGRRLEKLANETFS 235
Query: 326 DLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEA 385
+ ++E L +T +SP VL+ +P + Q +GE ++TFP YH+GFN GFN AE+
Sbjct: 236 ENYQECNAYLRHKMTMISPKVLRQHNIPYNKITQEAGEIMITFPFGYHAGFNHGFNGAES 295
Query: 386 VNVAPVDWLAHGQQA 400
N A W+ +G++A
Sbjct: 296 TNFASKRWIEYGKRA 310
Score = 80 (33.2 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
F P+ EEF++ YI I S+ A G+ +I PP+ W P
Sbjct: 21 FRPSYEEFQNFSAYIEYIESRGAHLAGLAKIQPPAEWVP 59
>SGD|S000000971 [details] [associations]
symbol:RPH1 "JmjC domain-containing histone demethylase"
species:4932 "Saccharomyces cerevisiae" [GO:0001078 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IMP;IDA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0043565
"sequence-specific DNA binding" evidence=IMP;IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=IMP;IDA] [GO:0032454 "histone
demethylase activity (H3-K9 specific)" evidence=IDA] [GO:0016577
"histone demethylation" evidence=IMP;IDA] Pfam:PF00096
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 SGD:S000000971
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0043565
GO:GO:0008270 EMBL:BK006939 eggNOG:COG5048 Gene3D:3.30.160.60
EMBL:U18922 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000112726
OrthoDB:EOG4NGKW6 GO:GO:0051864 GO:GO:0032454 PIR:S50672
RefSeq:NP_011096.1 PDB:3OPT PDB:3OPW PDBsum:3OPT PDBsum:3OPW
ProteinModelPortal:P39956 SMR:P39956 DIP:DIP-5418N IntAct:P39956
MINT:MINT-518485 STRING:P39956 PaxDb:P39956 PeptideAtlas:P39956
EnsemblFungi:YER169W GeneID:856916 KEGG:sce:YER169W CYGD:YER169w
OMA:EFLRHKM EvolutionaryTrace:P39956 NextBio:983368
Genevestigator:P39956 GermOnline:YER169W Uniprot:P39956
Length = 796
Score = 328 (120.5 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 61/157 (38%), Positives = 95/157 (60%)
Query: 244 GWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPK 303
G N+ N+ +LP ++L + + GV +LY G+ +SF WH+ED LYS+NY+H+G PK
Sbjct: 195 GLNVWNVAKLP-NILDHMETKVPGVNDSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPK 253
Query: 304 IWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGE 363
WY +P K M++ P+ + P+ L + SP +L+ G+ +V H GE
Sbjct: 254 QWYSIPQEDRFKFYKFMQEQFPEEAKNCPEFLRHKMFLASPKLLQENGIRCNEIVHHEGE 313
Query: 364 FVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQA 400
F++T+P YH+GFN G+N AE+VN A +WL G++A
Sbjct: 314 FMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKA 350
Score = 102 (41.0 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 28 IIDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPC--PLKAKNIWENA 85
I+ PVF PT E+FED Y I G+ +++PP W P A+ + +
Sbjct: 10 IVGGVPVFKPTYEQFEDFYAYCKAINKYGMKSGVVKVIPPKEWKDKLDLPYSAETL-QKI 68
Query: 86 KFSTRIQQ 93
K + IQQ
Sbjct: 69 KIKSPIQQ 76
Score = 52 (23.4 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 36/170 (21%), Positives = 64/170 (37%)
Query: 582 DMESEVFPMDCCEQKESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASH 641
D E + M S++SSPR+ P SR + S+E+ ++P + + +
Sbjct: 481 DHEDNIVAMSLTSMANSAASSPRL--------PL-SRLNSSNELSNAQPLLDMTNNTLAF 531
Query: 642 VSVNSHNEGNDETQVMNKKAK-VKHEVC---IDLNMDVIP---DGNESKLLLSDSHGKEA 694
N + N + NK + H ++ N+ +I N L +S +
Sbjct: 532 PRPNGPSGLNPLLYISNKNISGISHSAPHSPVNPNISLIKRVKSPNIVTLNISRESSRSP 591
Query: 695 IE-NLKAHLSACYQEKVLCSGTVKEQDTMQVRSDCNSSNSHKDPNKDQPS 743
I N +A Q TV T V + +N K P+ ++P+
Sbjct: 592 IALNYEARQQHSQQHSFSTPSTVSNLST-SVLGPLSDTNDIKTPHPERPN 640
>RGD|1306378 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=ISO] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0035064 "methylated
histone residue binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA;ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
RGD:1306378 GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OrthoDB:EOG4QRH37 EMBL:CH474008 IPI:IPI00949993
RefSeq:NP_001101436.1 UniGene:Rn.95937 Ensembl:ENSRNOT00000066165
GeneID:313539 KEGG:rno:313539 UCSC:RGD:1306378 NextBio:666373
Uniprot:D4A2N4
Length = 971
Score = 378 (138.1 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 71/157 (45%), Positives = 93/157 (59%)
Query: 245 WNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKI 304
WN+ L + V G I GV P+LY GM +SF WH ED LYS+NYLH+G+PK
Sbjct: 57 WNIGRLKTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKS 116
Query: 305 WYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEF 364
WY VP H LE+ + P + L +T +SP +LK G+P V Q +GEF
Sbjct: 117 WYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 176
Query: 365 VLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAV 401
++TFP YH+GFN GFNCAE+ N A W+ +G+QAV
Sbjct: 177 MITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAV 213
>UNIPROTKB|F1N9S1 [details] [associations]
symbol:F1N9S1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AADN02066264 EMBL:AADN02066265 EMBL:AADN02066266
EMBL:AADN02066267 EMBL:AADN02066268 EMBL:AADN02066269
EMBL:AADN02066270 EMBL:AADN02066271 EMBL:AADN02066272
EMBL:AADN02066273 EMBL:AADN02066274 EMBL:AADN02066275
EMBL:AADN02066276 EMBL:AADN02066277 EMBL:AADN02066278
EMBL:AADN02066279 EMBL:AADN02066280 EMBL:AADN02066281
EMBL:AADN02066282 EMBL:AADN02066283 IPI:IPI00679881
Ensembl:ENSGALT00000032836 Uniprot:F1N9S1
Length = 998
Score = 366 (133.9 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 68/156 (43%), Positives = 93/156 (59%)
Query: 245 WNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKI 304
WN+ +L + V G I GV P+LY GM ++F WH ED LYS+NYLH+G+PK
Sbjct: 94 WNIAHLNTILDVVGEDCGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 153
Query: 305 WYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEF 364
WY +P H LE+ + P L +T +SPS+LK G+P V Q +GEF
Sbjct: 154 WYAIPPEHGKRLERLAQGFFPSSSHGCNAFLRHKMTLISPSILKKYGIPFDKVTQEAGEF 213
Query: 365 VLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQA 400
++TFP YH+GFN GFNCAE+ N A + W+ +G+ A
Sbjct: 214 MITFPYGYHAGFNHGFNCAESTNFATIRWIDYGKAA 249
>UNIPROTKB|Q9U297 [details] [associations]
symbol:jmjd-2 "Lysine-specific demethylase 4" species:6239
"Caenorhabditis elegans" [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016702
EMBL:AL110490 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 GO:GO:0051864
eggNOG:NOG317950 KO:K06709 PIR:T27007 RefSeq:NP_496969.2
ProteinModelPortal:Q9U297 SMR:Q9U297 DIP:DIP-26971N
MINT:MINT-1077527 STRING:Q9U297 PaxDb:Q9U297
EnsemblMetazoa:Y48B6A.11 GeneID:175080 KEGG:cel:CELE_Y48B6A.11
UCSC:Y48B6A.11 CTD:175080 WormBase:Y48B6A.11 HOGENOM:HOG000021888
InParanoid:Q9U297 OMA:SSEHADR NextBio:886668 Uniprot:Q9U297
Length = 922
Score = 321 (118.1 bits), Expect = 3.8e-29, Sum P(2) = 3.8e-29
Identities = 64/172 (37%), Positives = 92/172 (53%)
Query: 233 TESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLY 292
TE + WN+N L G++L +I GV +LY GM ++F WH ED LY
Sbjct: 217 TEGSFYDAQVEEWNMNRL----GTILEDTNYEIKGVNTVYLYFGMYKTTFPWHAEDMDLY 272
Query: 293 SLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPD---LLHELVTQLSPSVLKA 349
S+N+LH+G PK W+ + HA E+ M + E P L ++P +L+
Sbjct: 273 SINFLHFGAPKYWFAISSEHADRFERFMSQQFSYQNEYAPQCKAFLRHKTYLVTPELLRQ 332
Query: 350 EGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAV 401
G+P +VQ EF++TFPR YH GFN G+N AE+ N A W+ +G+ AV
Sbjct: 333 AGIPYATMVQRPNEFIITFPRGYHMGFNLGYNLAESTNFASQRWIDYGKDAV 384
Score = 89 (36.4 bits), Expect = 3.8e-29, Sum P(2) = 3.8e-29
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESF--GICRIVPPSSWTP 72
E FYPT+ EF++ YI KI GI +IV P WTP
Sbjct: 86 EVLTFYPTMREFKNFSQYIKKIEQNGGHLKAGIAKIVAPEGWTP 129
>CGD|CAL0004229 [details] [associations]
symbol:orf19.2743 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016577 "histone demethylation" evidence=IEA] [GO:0051864
"histone demethylase activity (H3-K36 specific)" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0032454 "histone demethylase activity (H3-K9 specific)"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 CGD:CAL0004229 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 RefSeq:XP_720493.1
ProteinModelPortal:Q5AFV0 GeneID:3637916 KEGG:cal:CaO19.2743
Uniprot:Q5AFV0
Length = 606
Score = 317 (116.6 bits), Expect = 9.1e-29, Sum P(3) = 9.1e-29
Identities = 67/193 (34%), Positives = 103/193 (53%)
Query: 207 EVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDIS 266
E+E Y L +++ A ++G+ D +++ WN+ +LP L L +
Sbjct: 154 ELETNYWRSL---SYSEPMYGADTMGSVFDK---SITAWNVAHLPNL----LDLMEEKLP 203
Query: 267 GVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPD 326
GV +LY G+ +SF WH+ED LYS+NYLH+G PK WY +P S M D
Sbjct: 204 GVNQAYLYAGLWKASFAWHLEDQDLYSINYLHFGAPKQWYSIPQSQHEEFYALMVDLFHD 263
Query: 327 LFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAV 386
F++ + L +SP+ L+ G+ V H + GEF++T+P YH+GFN +N AE+V
Sbjct: 264 EFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAESV 323
Query: 387 NVAPVDWLAHGQQ 399
N A DW G++
Sbjct: 324 NFALDDWFEFGKR 336
Score = 82 (33.9 bits), Expect = 9.1e-29, Sum P(3) = 9.1e-29
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 33 PVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSW 70
PVF PT+ EF D + I GI +++PP+ W
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINKYGMQSGIVKVIPPTQW 60
Score = 40 (19.1 bits), Expect = 9.1e-29, Sum P(3) = 9.1e-29
Identities = 33/147 (22%), Positives = 59/147 (40%)
Query: 622 SSEVVQSEP-QRGTSGLSASHV-SVNSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIPDG 679
S EVV+ E QR +V + N+H + T+ +K+ + HE + N
Sbjct: 383 SIEVVKVEKIQRKCRKRKQDNVHTTNTHERVS--TKRPHKQPDIPHECALCPNTLQHTKY 440
Query: 680 NES---KLLLSDSHGKEAIENLKAH--LSACYQEKVLC---SGTVKEQDTM-----QVRS 726
+ S +LL +D++G + H ++ + ++ C + TV D + ++R
Sbjct: 441 SHSALFELLQADTYGTTPERPRRVHKICASMFPHQLKCDFKTNTVHGLDDITKNQKKLRC 500
Query: 727 D-CNSSNSHKDPNKDQPSCSRVIEGTC 752
C S C+R GTC
Sbjct: 501 GVCRQSEMGACFQCSYKKCTRAFHGTC 527
>UNIPROTKB|Q5AFV0 [details] [associations]
symbol:RPH1 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004229 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 RefSeq:XP_720493.1 ProteinModelPortal:Q5AFV0
GeneID:3637916 KEGG:cal:CaO19.2743 Uniprot:Q5AFV0
Length = 606
Score = 317 (116.6 bits), Expect = 9.1e-29, Sum P(3) = 9.1e-29
Identities = 67/193 (34%), Positives = 103/193 (53%)
Query: 207 EVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDIS 266
E+E Y L +++ A ++G+ D +++ WN+ +LP L L +
Sbjct: 154 ELETNYWRSL---SYSEPMYGADTMGSVFDK---SITAWNVAHLPNL----LDLMEEKLP 203
Query: 267 GVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPD 326
GV +LY G+ +SF WH+ED LYS+NYLH+G PK WY +P S M D
Sbjct: 204 GVNQAYLYAGLWKASFAWHLEDQDLYSINYLHFGAPKQWYSIPQSQHEEFYALMVDLFHD 263
Query: 327 LFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAV 386
F++ + L +SP+ L+ G+ V H + GEF++T+P YH+GFN +N AE+V
Sbjct: 264 EFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAESV 323
Query: 387 NVAPVDWLAHGQQ 399
N A DW G++
Sbjct: 324 NFALDDWFEFGKR 336
Score = 82 (33.9 bits), Expect = 9.1e-29, Sum P(3) = 9.1e-29
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 33 PVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSW 70
PVF PT+ EF D + I GI +++PP+ W
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINKYGMQSGIVKVIPPTQW 60
Score = 40 (19.1 bits), Expect = 9.1e-29, Sum P(3) = 9.1e-29
Identities = 33/147 (22%), Positives = 59/147 (40%)
Query: 622 SSEVVQSEP-QRGTSGLSASHV-SVNSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIPDG 679
S EVV+ E QR +V + N+H + T+ +K+ + HE + N
Sbjct: 383 SIEVVKVEKIQRKCRKRKQDNVHTTNTHERVS--TKRPHKQPDIPHECALCPNTLQHTKY 440
Query: 680 NES---KLLLSDSHGKEAIENLKAH--LSACYQEKVLC---SGTVKEQDTM-----QVRS 726
+ S +LL +D++G + H ++ + ++ C + TV D + ++R
Sbjct: 441 SHSALFELLQADTYGTTPERPRRVHKICASMFPHQLKCDFKTNTVHGLDDITKNQKKLRC 500
Query: 727 D-CNSSNSHKDPNKDQPSCSRVIEGTC 752
C S C+R GTC
Sbjct: 501 GVCRQSEMGACFQCSYKKCTRAFHGTC 527
>CGD|CAL0004209 [details] [associations]
symbol:orf19.2730 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0004209
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023
EMBL:AACQ01000025 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
eggNOG:NOG317950 RefSeq:XP_720249.1 RefSeq:XP_720480.1
ProteinModelPortal:Q5AF79 GeneID:3637861 GeneID:3638072
KEGG:cal:CaO19.10244 KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 309 (113.8 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 62/172 (36%), Positives = 94/172 (54%)
Query: 228 ASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVE 287
A ++G+ D +++ WN+ +LP L L + GV +LY G+ + F WH+E
Sbjct: 172 ADTMGSVFDK---SITAWNVAHLPNL----LDLMEEKLPGVNQAYLYAGLWKALFAWHLE 224
Query: 288 DHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVL 347
D LYS+NYLH+G PK WY +P S M D F++ + L +SP+ L
Sbjct: 225 DQDLYSINYLHFGAPKQWYSIPQSQHEEFYALMVDLFHDEFKQCSEFLRHKTFMVSPAYL 284
Query: 348 KAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQ 399
+ G+ V H + GEF++T+P YH+GFN +N AE+VN A DW G++
Sbjct: 285 EKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAESVNFALDDWFEFGKR 336
Score = 83 (34.3 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 33 PVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSW 70
PVF PT+ EF D + I + GI +++PP+ W
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINNYGMQSGIVKVIPPTQW 60
>UNIPROTKB|Q5AF79 [details] [associations]
symbol:RPH2 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004209 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 EMBL:AACQ01000025
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG317950
RefSeq:XP_720249.1 RefSeq:XP_720480.1 ProteinModelPortal:Q5AF79
GeneID:3637861 GeneID:3638072 KEGG:cal:CaO19.10244
KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 309 (113.8 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 62/172 (36%), Positives = 94/172 (54%)
Query: 228 ASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVE 287
A ++G+ D +++ WN+ +LP L L + GV +LY G+ + F WH+E
Sbjct: 172 ADTMGSVFDK---SITAWNVAHLPNL----LDLMEEKLPGVNQAYLYAGLWKALFAWHLE 224
Query: 288 DHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVL 347
D LYS+NYLH+G PK WY +P S M D F++ + L +SP+ L
Sbjct: 225 DQDLYSINYLHFGAPKQWYSIPQSQHEEFYALMVDLFHDEFKQCSEFLRHKTFMVSPAYL 284
Query: 348 KAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQ 399
+ G+ V H + GEF++T+P YH+GFN +N AE+VN A DW G++
Sbjct: 285 EKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAESVNFALDDWFEFGKR 336
Score = 83 (34.3 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 33 PVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSW 70
PVF PT+ EF D + I + GI +++PP+ W
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINNYGMQSGIVKVIPPTQW 60
>ASPGD|ASPL0000057825 [details] [associations]
symbol:AN1060 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR017956 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00384 SMART:SM00558 GO:GO:0005634
EMBL:BN001308 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0008168 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
EnsemblFungi:CADANIAT00001580 HOGENOM:HOG000206472 OMA:NIEKQRS
Uniprot:C8VTU6
Length = 1405
Score = 336 (123.3 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 66/160 (41%), Positives = 96/160 (60%)
Query: 242 MSGWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGD 301
++ WN+ LP L L G + GV +LY+GM ++F WH+ED LYS+NY+H+G
Sbjct: 350 ITSWNVAKLPNL----LDVIGQKVPGVNTAYLYLGMWKATFAWHLEDVDLYSINYIHFGA 405
Query: 302 PKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAE-GVPVYHVVQH 360
PK WY + A E+AM+ P + L +SPS+LK++ G+ V +V +
Sbjct: 406 PKQWYSISQEDAPRFEQAMKSIWPSDAKTCDQFLRHKTYLVSPSLLKSQYGITVNKMVHY 465
Query: 361 SGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQA 400
GEFV+T+P YHSG+N G+NCAE+VN A WL +G+ A
Sbjct: 466 EGEFVITYPYGYHSGYNLGYNCAESVNFATEKWLDYGRVA 505
Score = 62 (26.9 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 33 PVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCP 75
PVF P F D +I +I G+ +++PP W P
Sbjct: 81 PVFKP----FRDFQSFIKRIDKYGMRSGVVKVIPPKEWRDALP 119
Score = 50 (22.7 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 614 PCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQV 656
P +++H+ S+ S Q+ + SH + NSH N+ V
Sbjct: 999 PQVTKAHLQSQQQHSHQQQ-QQNTNGSHSTANSHLPANNFANV 1040
Score = 42 (19.8 bits), Expect = 8.2e-27, Sum P(3) = 8.2e-27
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 590 MDCCEQKESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSE 629
+D ++KE+ ++ N V+G P R + E+ + +
Sbjct: 1139 LDVLQKKETETAKQEAANKVKGATPKLPRKYAYLELQREQ 1178
>UNIPROTKB|F5GYH2 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL354707 EMBL:AL137020
EMBL:AL161443 EMBL:AL445592 EMBL:AL513412 HGNC:HGNC:17071
ChiTaRS:KDM4C IPI:IPI01018984 ProteinModelPortal:F5GYH2 SMR:F5GYH2
Ensembl:ENST00000536108 ArrayExpress:F5GYH2 Bgee:F5GYH2
Uniprot:F5GYH2
Length = 629
Score = 322 (118.4 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 56/121 (46%), Positives = 77/121 (63%)
Query: 280 SSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELV 339
++F WH ED LYS+NYLH+G+PK WY +P H LE+ + P + L +
Sbjct: 4 TTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKM 63
Query: 340 TQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQ 399
T +SPSVLK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A V W+ +G+
Sbjct: 64 TLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKV 123
Query: 400 A 400
A
Sbjct: 124 A 124
>UNIPROTKB|F5H590 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347 Pfam:PF01388
Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AL136162 EMBL:AL021938 HGNC:HGNC:6196
IPI:IPI01018952 ProteinModelPortal:F5H590 SMR:F5H590 PRIDE:F5H590
Ensembl:ENST00000541660 UCSC:uc011diu.1 ArrayExpress:F5H590
Bgee:F5H590 Uniprot:F5H590
Length = 960
Score = 219 (82.2 bits), Expect = 4.5e-25, Sum P(2) = 4.5e-25
Identities = 45/114 (39%), Positives = 65/114 (57%)
Query: 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWN 246
EP+ +IE EYWR++E V V+ G ++T SGFP S + ++ GWN
Sbjct: 802 EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFPVGKS-------EPFSRHGWN 853
Query: 247 LNNLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWG 300
L LP GS+L G+ + GV +PWL +GM FS+ CW + +HL ++YLH G
Sbjct: 854 LTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTG 906
Score = 157 (60.3 bits), Expect = 4.5e-25, Sum P(2) = 4.5e-25
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 29 IDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFS 88
+DE PV P+ +EF D L YI +R++ E FG+CR++PP W P C L + +F
Sbjct: 516 MDEIPVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPPPDWRPECKLN-----DEMRFV 570
Query: 89 TRIQQIDLLQNR 100
T+IQ I L R
Sbjct: 571 TQIQHIHKLGRR 582
>UNIPROTKB|E7EV17 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
EMBL:AL354707 EMBL:AL137020 EMBL:AL161443 EMBL:AL445592
EMBL:AL513412 HGNC:HGNC:17071 ChiTaRS:KDM4C IPI:IPI00910024
ProteinModelPortal:E7EV17 SMR:E7EV17 Ensembl:ENST00000442236
UCSC:uc011lmk.2 ArrayExpress:E7EV17 Bgee:E7EV17 Uniprot:E7EV17
Length = 801
Score = 322 (118.4 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 56/121 (46%), Positives = 77/121 (63%)
Query: 280 SSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELV 339
++F WH ED LYS+NYLH+G+PK WY +P H LE+ + P + L +
Sbjct: 4 TTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKM 63
Query: 340 TQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQ 399
T +SPSVLK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A V W+ +G+
Sbjct: 64 TLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKV 123
Query: 400 A 400
A
Sbjct: 124 A 124
Score = 38 (18.4 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 778 FLKTDTINGSNVRTSVTDQRFQKKLETCVEPI 809
F D I G R V RF K E +P+
Sbjct: 755 FYGADIIQGERKRQRVLSSRF--KNEYVADPV 784
>UNIPROTKB|C9JGA3 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016
PROSITE:PS51011 SMART:SM00249 SMART:SM00501 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D
IPI:IPI00644852 ProteinModelPortal:C9JGA3 SMR:C9JGA3 STRING:C9JGA3
Ensembl:ENST00000447300 HOGENOM:HOG000174636 ArrayExpress:C9JGA3
Bgee:C9JGA3 Uniprot:C9JGA3
Length = 425
Score = 163 (62.4 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EF+D LGYIAKIR AE GIC+I PP+ W PP ++ +N +F+ R
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 91 IQQIDLLQ 98
+Q+++ L+
Sbjct: 69 VQRLNELE 76
Score = 157 (60.3 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 41/114 (35%), Positives = 63/114 (55%)
Query: 140 EKFGF-QSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPSVVDIEGEYW 198
E FGF Q+ + +L+ F + A +FK YF M H + P+ + +E E+W
Sbjct: 326 EAFGFEQATQEYSLQSFGEMADSFKSDYFNMP-----------VH--MVPTEL-VEKEFW 371
Query: 199 RIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLD-QYAMSGWNLNNLP 251
R++ ++V V YGAD+ + F SGFP ++S S + +YA SGWNLN +P
Sbjct: 372 RLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMP 425
>UNIPROTKB|I3LQ64 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 Ensembl:ENSSSCT00000031638
Uniprot:I3LQ64
Length = 911
Score = 221 (82.9 bits), Expect = 1.7e-18, Sum P(4) = 1.7e-18
Identities = 42/95 (44%), Positives = 54/95 (56%)
Query: 273 LYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQP 332
LY GM +SF WH ED LYS+NYLH+G+PK WY VP H LE + P +
Sbjct: 162 LYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLESLAKGFFPGSAQSCE 221
Query: 333 DLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLT 367
L +T +SP +LK G+P V Q +GEF+ T
Sbjct: 222 AFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMFT 256
Score = 102 (41.0 bits), Expect = 1.7e-18, Sum P(4) = 1.7e-18
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
FYPTVEEF + YIA I S+ A G+ ++VPP W P
Sbjct: 17 FYPTVEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKP 55
Score = 40 (19.1 bits), Expect = 1.7e-18, Sum P(4) = 1.7e-18
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 613 GPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGND 652
G SR VSSE SEP ++V+S+ G +
Sbjct: 485 GSGSSRDSVSSESEASEPLSCQGQGQTGVLTVHSYARGGE 524
Score = 37 (18.1 bits), Expect = 1.7e-18, Sum P(4) = 1.7e-18
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 484 EIDFDLKTERECFSCFYDLHLSAA 507
E F L E+E F C L L A
Sbjct: 252 EFMFTLGLEKERFPCLSPLTLPTA 275
>UNIPROTKB|I3LVJ1 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005737
GO:GO:0005813 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
Ensembl:ENSSSCT00000026209 Uniprot:I3LVJ1
Length = 916
Score = 221 (82.9 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 42/95 (44%), Positives = 54/95 (56%)
Query: 273 LYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQP 332
LY GM +SF WH ED LYS+NYLH+G+PK WY VP H LE + P +
Sbjct: 162 LYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLESLAKGFFPGSAQSCE 221
Query: 333 DLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLT 367
L +T +SP +LK G+P V Q +GEF+ T
Sbjct: 222 AFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMFT 256
Score = 102 (41.0 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 35 FYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTP 72
FYPTVEEF + YIA I S+ A G+ ++VPP W P
Sbjct: 17 FYPTVEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKP 55
Score = 40 (19.1 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 613 GPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGND 652
G SR VSSE SEP ++V+S+ G +
Sbjct: 490 GSGSSRDSVSSESEASEPLSCQGQGQTGVLTVHSYARGGE 529
Score = 37 (18.1 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 484 EIDFDLKTERECFSCFYDLHLSAA 507
E F L E+E F C L L A
Sbjct: 252 EFMFTLGLEKERFPCLSPLTLPTA 275
>SGD|S000002503 [details] [associations]
symbol:GIS1 "Histone demethylase and transcription factor"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0071071 "regulation of phospholipid biosynthetic
process" evidence=IMP] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IC] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0060275 "maintenance of stationary phase
in response to starvation" evidence=IMP] [GO:0001300 "chronological
cell aging" evidence=IMP] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA;IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0016577 "histone
demethylation" evidence=IMP] [GO:0051864 "histone demethylase
activity (H3-K36 specific)" evidence=IMP] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 SGD:S000002503 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0008270
EMBL:BK006938 GO:GO:0001300 GO:GO:0000978 GO:GO:0001077
eggNOG:COG5048 Gene3D:3.30.160.60 EMBL:Z47746 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 PIR:S51245
RefSeq:NP_010381.1 ProteinModelPortal:Q03833 SMR:Q03833
IntAct:Q03833 MINT:MINT-4480789 STRING:Q03833 PaxDb:Q03833
PeptideAtlas:Q03833 EnsemblFungi:YDR096W GeneID:851670
KEGG:sce:YDR096W CYGD:YDR096w GeneTree:ENSGT00530000063342
HOGENOM:HOG000112726 OrthoDB:EOG4NGKW6 NextBio:969289
Genevestigator:Q03833 GermOnline:YDR096W GO:GO:0051864
GO:GO:0060275 GO:GO:0071071 Uniprot:Q03833
Length = 894
Score = 211 (79.3 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 54/172 (31%), Positives = 87/172 (50%)
Query: 217 ETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLVPWLYVG 276
+T AF+ F ++ S + Y ++ WNLNNLP S+ + ++G
Sbjct: 151 KTIAFSKPF---YAVDENSSIFPYDLTLWNLNNLP---DSINSSNRRLLTGQ-------S 197
Query: 277 MCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLL- 335
C F WH+++ + S+NYLH+G PK WY +P ++ K + K E P +
Sbjct: 198 KCI--FPWHLDEQNKCSINYLHFGAPKQWYSIPSANTDQFLKILSKEPSSNKENCPAFIR 255
Query: 336 HE-LVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAV 386
H+ ++T SP L+ + VVQ EF++TFP +SGFN G+N E++
Sbjct: 256 HQNIIT--SPDFLRKNNIKFNRVVQFQHEFIITFPYCMYSGFNYGYNFGESI 305
Score = 79 (32.9 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 28 IIDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSW 70
+ID PVF P++ EF + +I +I GI +++PP W
Sbjct: 8 VIDGVPVFKPSMMEFANFQYFIDEITKFGIENGIVKVIPPKEW 50
Score = 38 (18.4 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 619 SHVSSEVVQSEPQRGTSGLSASH 641
S V S ++ S GTSGL +
Sbjct: 539 STVPSSMMHSSTLNGTSGLGGDN 561
>POMBASE|SPAC343.11c [details] [associations]
symbol:msc1 "multi-copy suppressor of Chk1" species:4896
"Schizosaccharomyces pombe" [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0000812 "Swr1 complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISM] [GO:0006974 "response to DNA damage
stimulus" evidence=IGI] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=ISM] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0019787 "small
conjugating protein ligase activity" evidence=ISM] [GO:0032452
"histone demethylase activity" evidence=ISM] [GO:0043486 "histone
exchange" evidence=IPI] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 PomBase:SPAC343.11c
GO:GO:0007126 EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0016573 GO:GO:0006974
GO:GO:0016706 GO:GO:0000812 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0019787 GO:GO:0000118 OrthoDB:EOG4Z39NV
InterPro:IPR003349 PROSITE:PS51183 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032452 PIR:T38660 RefSeq:NP_593431.1
ProteinModelPortal:Q9UT79 STRING:Q9UT79 EnsemblFungi:SPAC343.11c.1
GeneID:2541710 KEGG:spo:SPAC343.11c NextBio:20802802 Uniprot:Q9UT79
Length = 1588
Score = 215 (80.7 bits), Expect = 4.7e-14, Sum P(3) = 4.7e-14
Identities = 60/234 (25%), Positives = 103/234 (44%)
Query: 211 YYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDISGVLV 270
YY L T ++ T S + Y WNL + S L F G+L
Sbjct: 456 YYPESLPTPLLGRAV-NTTAFPT-SRQNAYYNDPWNLYFIHFSKLSPLRFTPP---GILT 510
Query: 271 PWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEE 330
+ +G + W + L+ ++Y H+G +IWY +P EK + P +E
Sbjct: 511 STISLGQPLTCQGWQRDSMSLFGMHYHHYGAQRIWYVIPEVDGPKYEKLLNDLSPSFIQE 570
Query: 331 QPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAP 390
+P+ L + L S+L + G+ V VQ+S EFV+T P Y++ + GF+ +E+V A
Sbjct: 571 KPETLIKSKILLPISMLISNGIQVLTFVQNSNEFVITSPNTYYTVLDTGFSLSESVPFAT 630
Query: 391 VDWLA--HGQQAVELYSEQHRKTSLSHDKLLFGSV---QAAIKALWELSVLQKK 439
+W+ H + + +Y H S D +L + + A W ++ L+ +
Sbjct: 631 KEWIQDMHAENSFNMYKNLHISAPFSLDHILLANATLDKTVHSAYWLMTCLKDR 684
Score = 72 (30.4 bits), Expect = 4.7e-14, Sum P(3) = 4.7e-14
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 37 PTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
P EEF L +I+ + + A G R++PP +W CPL KF TR
Sbjct: 87 PKKEEFSRGLDFISDLYDQTARKSGAVRVIPPDNWK--CPLTINTT--TFKFLTR 137
Score = 37 (18.1 bits), Expect = 4.7e-14, Sum P(3) = 4.7e-14
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 694 AIENLKAHLSACYQEKVLCSGTVKEQDTMQVRSDCNS 730
+IE +AC K C T+ VR D N+
Sbjct: 727 SIEEKNGTKTACLSHKDECFPNTDSDLTVLVRYDDNA 763
>UNIPROTKB|G4NIH1 [details] [associations]
symbol:MGG_09841 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 EMBL:CM001236
RefSeq:XP_003720398.1 EnsemblFungi:MGG_09841T0 GeneID:2680840
KEGG:mgr:MGG_09841 Uniprot:G4NIH1
Length = 419
Score = 204 (76.9 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 49/132 (37%), Positives = 65/132 (49%)
Query: 261 EGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAM 320
E + I G+ P+ Y G + F WHVED L SLN+L G K+W+ +P + E+
Sbjct: 212 EYAPIPGLCYPYKYEGTALAPFTWHVEDVGLISLNHLFQG-VKVWFCIPRADRLAAEEVF 270
Query: 321 RKHLPDLFEEQP---DLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFN 377
R P + T + L+ GV V VVQ +GE V T P AYHSGF+
Sbjct: 271 RSAPMTATAAIPHHEQFMRHNATLDGHAALRRAGVRVVPVVQRAGEIVATLPEAYHSGFS 330
Query: 378 CGFNCAEAVNVA 389
G+ EAVN A
Sbjct: 331 AGYTVCEAVNFA 342
>UNIPROTKB|G4MMV6 [details] [associations]
symbol:MGG_02045 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 EMBL:CM001231
RefSeq:XP_003708798.1 EnsemblFungi:MGG_02045T0 GeneID:2681322
KEGG:mgr:MGG_02045 Uniprot:G4MMV6
Length = 1104
Score = 193 (73.0 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 48/132 (36%), Positives = 67/132 (50%)
Query: 265 ISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHL 324
I G+ P Y G F+ F WH ED L ++NYLH+G KIW+ +H +KA
Sbjct: 656 IPGLHTPTCYRGTPFAPFAWHHEDFELGAINYLHYGQ-KIWFV---THPGFFDKATATFQ 711
Query: 325 PDLFEEQPD---LLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFN 381
L +Q L HE V L+ + +P +Q +G+ V+ +PRAYHSGF
Sbjct: 712 EALNIDQDHSQFLRHEAVHG-GVQYLRNKDIPTIGFMQEAGQIVVVYPRAYHSGFGATAT 770
Query: 382 CAEAVNVAPVDW 393
AEAVN A + +
Sbjct: 771 VAEAVNYADLQY 782
>POMBASE|SPBP19A11.06 [details] [associations]
symbol:lid2 "Lid2 complex subunit, predicted histone
demethylase Lid2" species:4896 "Schizosaccharomyces pombe"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031507 "heterochromatin
assembly" evidence=IMP] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0034630 "RITS complex
localization" evidence=IMP] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=IDA] [GO:0048189
"Lid2 complex" evidence=IDA] [GO:0051567 "histone H3-K9
methylation" evidence=IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00184 SMART:SM00249 SMART:SM00558 PomBase:SPBP19A11.06
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0030466
GO:GO:0030702 GO:GO:0000070 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031934 GO:GO:0051567
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0048189 GO:GO:0019787
GO:GO:0031507 GO:GO:0051572 GO:GO:0031618 PROSITE:PS51183
GO:GO:0034630 eggNOG:NOG327026 GO:GO:0034647 OrthoDB:EOG44N21B
KO:K11446 PIR:T50313 RefSeq:NP_596174.1 ProteinModelPortal:Q9HDV4
IntAct:Q9HDV4 STRING:Q9HDV4 EnsemblFungi:SPBP19A11.06.1
GeneID:2541299 KEGG:spo:SPBP19A11.06 OMA:LPCVIRE NextBio:20802409
Uniprot:Q9HDV4
Length = 1513
Score = 219 (82.2 bits), Expect = 9.6e-11, Sum P(4) = 9.6e-11
Identities = 76/315 (24%), Positives = 134/315 (42%)
Query: 206 DEVEVYYGADL--ETGAFA----SGFPKA------SSLGTES--DLDQYAMSGWNLNNLP 251
D++E++Y + L FA G +A SSL ++ L++Y+ WNL+NLP
Sbjct: 361 DDIELFYWSSLAESNSGFAPLELEGLSQAYTSTIQSSLPSKEVFPLEKYSSEPWNLHNLP 420
Query: 252 RLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGS 311
+ + SD+S + + L +GM F + W L++ +GD WY +P
Sbjct: 421 FENPCLFNYSFSDLSSLTITRLSIGMVFYTHGWTKSSLSTGLLHHHRFGDTVTWYVLPPD 480
Query: 312 HASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRA 371
+ E+ + P E + + L +SPS L G + EF++ P +
Sbjct: 481 ESDAFERYLISSYPQYTMEDLNRSNGLPVIVSPSSLIENGFHPIAIDLRPNEFLVVSPNS 540
Query: 372 YHSGFNCGFNCAEAVNVAPVDWLAHG--QQAVELYSEQHRKTSLSHDKLLFGSVQAAIKA 429
YH GF+ GF+ E+VN A V+W+ G ++ + +S+S++ ++ V
Sbjct: 541 YHMGFHQGFSSFESVNFATVNWIKDGLLNSSISVLKSMRIPSSVSYEAVIISMV------ 594
Query: 430 LWELSVLQKKTPGNRKWKDACGKDGVLTK-AIKTRVQMKKEGLQKLPSYFKLQKMEIDFD 488
L K + +W C +D + + A K + +Q L + +EI
Sbjct: 595 ------LSKNPCFSSEWLIKCFEDMIANESASKNEIMKLVPNIQALKLESSVP-LEIRCS 647
Query: 489 LKTERECFSCFYDLH 503
++ CF F H
Sbjct: 648 -NCKQPCFLSFMQCH 661
Score = 40 (19.1 bits), Expect = 9.6e-11, Sum P(4) = 9.6e-11
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 620 HVS--SEVVQSEPQRGTSGLSASH 641
H+S S+ V+++P+ G+SG + ++
Sbjct: 1422 HISGFSKEVETDPKLGSSGYTLNN 1445
Score = 38 (18.4 bits), Expect = 9.6e-11, Sum P(4) = 9.6e-11
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 60 GICRIVPPSSWTPPCPL 76
G +++PP W P L
Sbjct: 84 GAIKLLPPEGWQIPVVL 100
Score = 37 (18.1 bits), Expect = 9.6e-11, Sum P(4) = 9.6e-11
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 150 LTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRLEPS 189
L LE ++ Q CY E S F+ KR E S
Sbjct: 184 LRLEDTKEVRQVLTRCYDRYIKPFERDSSPSFKSKRSESS 223
>CGD|CAL0001611 [details] [associations]
symbol:orf19.2476 species:5476 "Candida albicans" [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034630 "RITS complex localization" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0031505 "fungal-type cell wall organization"
evidence=IEA] [GO:0043486 "histone exchange" evidence=IEA]
[GO:0016573 "histone acetylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0031507 "heterochromatin assembly"
evidence=IEA] [GO:0051572 "negative regulation of histone H3-K4
methylation" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 CGD:CAL0001611 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AACQ01000041 InterPro:IPR003349
PROSITE:PS51183 eggNOG:NOG327026 RefSeq:XP_718497.1
ProteinModelPortal:Q5AA08 GeneID:3639891 KEGG:cal:CaO19.2476
Uniprot:Q5AA08
Length = 1684
Score = 126 (49.4 bits), Expect = 7.3e-10, Sum P(3) = 7.3e-10
Identities = 28/83 (33%), Positives = 46/83 (55%)
Query: 241 AMSGWNLNNLPRLPGSVL-AFEGSDISGVLV--PWLYVGMCFSSFCWHVEDHHLYSLNYL 297
A+ WNL+NLP LP ++L A + +D++ + + +GM FS+ W EDH +N+
Sbjct: 590 ALHPWNLHNLPILPNALLGALDKTDVNDYDLNESRINIGMTFSTENWTCEDHFTNLINFQ 649
Query: 298 HWGDPKIWYGVPGSHASTLEKAM 320
+G K WY +P S E+ +
Sbjct: 650 FFGAVKKWYFIPESEFEKFERLL 672
Score = 111 (44.1 bits), Expect = 7.3e-10, Sum P(3) = 7.3e-10
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 342 LSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAV 401
++P +L + G+ +Q GE ++ FP+ + S + GFN +E VN+A WL + ++
Sbjct: 753 ITPELLDSFGIRYTTTIQEPGECIIKFPKTFSSTISFGFNLSEEVNLATKSWLNYALESE 812
Query: 402 ELYSEQHRKTSLSHDKLL 419
+ ++Q+ S KLL
Sbjct: 813 KWLAKQNIIPGFSTFKLL 830
Score = 50 (22.7 bits), Expect = 7.3e-10, Sum P(3) = 7.3e-10
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 30 DEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPP 67
+E P F T E+ +D + +I + + +G ++ P
Sbjct: 107 NEVPCFSLTPEQTKDPIAFIESVMDVGKEYGAVKVKLP 144
>UNIPROTKB|F5GZ99 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886
ChiTaRS:KDM5A IPI:IPI00872073 ProteinModelPortal:F5GZ99 SMR:F5GZ99
Ensembl:ENST00000535014 ArrayExpress:F5GZ99 Bgee:F5GZ99
Uniprot:F5GZ99
Length = 126
Score = 147 (56.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTR 90
E PVF P+ EEF D L +I +IR AE GIC+I PP W PP + K+ +F+ R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKSF----RFTPR 73
Query: 91 IQQIDLLQ 98
+Q+++ L+
Sbjct: 74 VQRLNELE 81
>POMBASE|SPBC83.07 [details] [associations]
symbol:jmj3 "Lid2 complex subunit, histone demethylase
H3-K36 specific Jmj3" species:4896 "Schizosaccharomyces pombe"
[GO:0000790 "nuclear chromatin" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IC] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IC]
[GO:0016577 "histone demethylation" evidence=ISO] [GO:0048189 "Lid2
complex" evidence=IDA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=ISO] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 PomBase:SPBC83.07 GO:GO:0005829
EMBL:CU329671 GO:GO:0006357 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0000790 GO:GO:0048189 InterPro:IPR003349
PROSITE:PS51183 SMART:SM00545 GO:GO:0051864 PIR:T40696
RefSeq:NP_595639.1 ProteinModelPortal:O94691 STRING:O94691
EnsemblFungi:SPBC83.07.1 GeneID:2540780 KEGG:spo:SPBC83.07
eggNOG:NOG317950 OrthoDB:EOG4WQ4CQ NextBio:20801898 Uniprot:O94691
Length = 752
Score = 135 (52.6 bits), Expect = 7.0e-09, Sum P(3) = 7.0e-09
Identities = 33/109 (30%), Positives = 52/109 (47%)
Query: 273 LYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKI-WYGVPGSHASTLEKAMRKHLPDLFEEQ 331
L+ G ++ W VE L+++ +H G + WY +P +H+ + +K K D
Sbjct: 201 LFAGKWKTTLPWRVESPELHAVQ-VHLGGSSLQWYVIPSAHSESFKKLAGKLAQDEHWRC 259
Query: 332 PD-LLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCG 379
D LLH+ + PS L G+ Y V E ++TFP +HS F G
Sbjct: 260 SDFLLHQNIL-FPPSTLVQNGIVTYSTVLKQDELLITFPGTHHSAFCLG 307
Score = 70 (29.7 bits), Expect = 7.0e-09, Sum P(3) = 7.0e-09
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 30 DEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPP 73
D PV P + EF D +I ++ + +G ++V PSS P
Sbjct: 32 DGIPVVEPKISEFVDMESFIRRVERLGKKYGAIKVVRPSSVLNP 75
Score = 60 (26.2 bits), Expect = 7.0e-09, Sum P(3) = 7.0e-09
Identities = 38/170 (22%), Positives = 76/170 (44%)
Query: 558 LKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQKESSSSSPRVE--NIVEGNG-- 613
L++ S++ +C +D +V++ E + ++ESS +P ++ NIV +G
Sbjct: 513 LEDRVSEHMLLLECEKSD--VVEVPYECILTSSSAAGRRESSYYNPALKAPNIVYDDGVP 570
Query: 614 ---------PCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNS--HNEGNDETQVMNKKAK 662
P R V +++ +P T +S S+ + E ++ T ++
Sbjct: 571 INWNEYSELPSLDR-FVLPKLLPGKPIEFTPPISVEPTSIKTIAAEESSEPTSSVDVAPT 629
Query: 663 VKHEVCIDLNMDVIPDGNESKLLLSDSH-GKEAIENLKAHLSACYQEKVL 711
+V ++N++ I + NES + LSD K E+++ A +E VL
Sbjct: 630 PVEDV--NVNLESISNTNESVVDLSDPLVSKNGFEDVERSSVADLEEDVL 677
>SGD|S000004788 [details] [associations]
symbol:ECM5 "Non-essential protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0070211 "Snt2C complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
SGD:S000004788 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:Z49808 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 PIR:S55123
RefSeq:NP_013901.1 ProteinModelPortal:Q03214 SMR:Q03214
DIP:DIP-6678N IntAct:Q03214 MINT:MINT-631320 STRING:Q03214
PaxDb:Q03214 PeptideAtlas:Q03214 PRIDE:Q03214 EnsemblFungi:YMR176W
GeneID:855214 KEGG:sce:YMR176W CYGD:YMR176w eggNOG:KOG1246
OrthoDB:EOG4Z39NV NextBio:978720 Genevestigator:Q03214
GermOnline:YMR176W GO:GO:0070211 InterPro:IPR003349 PROSITE:PS51183
Uniprot:Q03214
Length = 1411
Score = 110 (43.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 31/105 (29%), Positives = 50/105 (47%)
Query: 209 EVYYGADLETGAFASGFP-KASSLGTESDLDQYAMSG----WNLNNLPRLPGSVLAFEGS 263
E + +++TG G P S G S +++A+ WNL+N+P S+L
Sbjct: 444 EHFIDFEIDTGL---GLPCSMRSPGNNSSNEKFAIKNILDQWNLDNIPLNELSLLQHLDL 500
Query: 264 DISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGV 308
D++ +GM FS W V DH L S+++ H G K+ Y +
Sbjct: 501 DMANFTRTTYDIGMLFSCQGWSVSDHFLPSIDFNHLGSTKLVYSI 545
Score = 104 (41.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 344 PSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVEL 403
P+ + A G+ +Y Q G ++ FP+A+ GF ++ AP WL +A +
Sbjct: 634 PNFILANGIKLYKTTQEQGSYIFKFPKAFTCSIGSGFYLSQNAKFAPSSWLRFSSEAAKW 693
Query: 404 YSEQHRKTSLSHDKLLFGSV 423
S+ L ++LL ++
Sbjct: 694 TSKMGFLPGLDVNQLLINAL 713
>UNIPROTKB|F5GZR8 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886
ChiTaRS:KDM5A IPI:IPI01011614 ProteinModelPortal:F5GZR8 SMR:F5GZR8
Ensembl:ENST00000543507 ArrayExpress:F5GZR8 Bgee:F5GZR8
Uniprot:F5GZR8
Length = 131
Score = 123 (48.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 31 EAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPP-----SS----WTPPCPLKAKNI 81
E PVF P+ EEF D L +I +IR AE GIC+I PP SS W PP + K+
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKFWQISSVSKDWQPPFACEVKSF 77
Query: 82 WENAKFSTRIQQIDLLQ 98
+F+ R+Q+++ L+
Sbjct: 78 ----RFTPRVQRLNELE 90
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 873 838 0.00081 122 3 11 22 0.41 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 120
No. of states in DFA: 634 (67 KB)
Total size of DFA: 477 KB (2222 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 77.15u 0.12s 77.27t Elapsed: 00:00:04
Total cpu time: 77.18u 0.13s 77.31t Elapsed: 00:00:04
Start: Tue May 21 14:08:33 2013 End: Tue May 21 14:08:37 2013
WARNINGS ISSUED: 1