Query 002857
Match_columns 873
No_of_seqs 706 out of 4389
Neff 6.7
Searched_HMMs 46136
Date Thu Mar 28 12:11:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002857.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002857hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 1.9E-51 4.1E-56 460.6 24.6 287 146-469 61-353 (361)
2 PLN00113 leucine-rich repeat r 100.0 2.2E-49 4.7E-54 497.9 31.3 417 1-470 506-953 (968)
3 KOG0192 Tyrosine kinase specif 100.0 4.8E-44 1E-48 399.3 24.2 259 163-474 44-309 (362)
4 KOG0581 Mitogen-activated prot 100.0 8.6E-43 1.9E-47 374.9 16.2 259 149-464 75-335 (364)
5 KOG0197 Tyrosine kinases [Sign 100.0 1.5E-42 3.2E-47 388.1 16.7 254 163-470 209-463 (468)
6 KOG0595 Serine/threonine-prote 100.0 5.9E-42 1.3E-46 371.1 15.6 201 159-380 9-217 (429)
7 KOG0575 Polo-like serine/threo 100.0 3.8E-41 8.3E-46 380.1 20.1 248 160-463 18-268 (592)
8 KOG1026 Nerve growth factor re 100.0 1.9E-41 4.2E-46 395.1 13.2 267 161-470 487-764 (774)
9 KOG0615 Serine/threonine prote 100.0 1.4E-40 3E-45 359.7 15.1 253 159-463 171-436 (475)
10 KOG0591 NIMA (never in mitosis 100.0 2.3E-41 4.9E-46 350.3 6.6 260 161-467 20-284 (375)
11 KOG0193 Serine/threonine prote 100.0 3.2E-40 6.9E-45 370.7 14.5 267 153-471 385-656 (678)
12 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.1E-39 4.4E-44 359.4 20.7 271 159-470 6-336 (338)
13 KOG0196 Tyrosine kinase, EPH ( 100.0 1.3E-40 2.9E-45 380.5 9.6 270 149-470 609-893 (996)
14 KOG0593 Predicted protein kina 100.0 6.4E-39 1.4E-43 335.0 15.7 277 160-463 2-283 (396)
15 KOG0598 Ribosomal protein S6 k 100.0 8.6E-39 1.9E-43 344.0 17.0 247 159-426 24-284 (357)
16 KOG0582 Ste20-like serine/thre 100.0 1.9E-38 4E-43 346.1 19.1 263 159-463 25-292 (516)
17 KOG1095 Protein tyrosine kinas 100.0 5.7E-39 1.2E-43 386.3 16.2 269 161-475 693-968 (1025)
18 KOG0600 Cdc2-related protein k 100.0 1.4E-38 3E-43 351.5 17.8 274 160-462 117-398 (560)
19 KOG0198 MEKK and related serin 100.0 1.2E-38 2.6E-43 347.1 15.9 259 160-466 17-278 (313)
20 PHA02988 hypothetical protein; 100.0 7.5E-38 1.6E-42 339.6 22.2 262 148-469 13-280 (283)
21 KOG0592 3-phosphoinositide-dep 100.0 1.8E-38 3.9E-43 353.1 14.2 254 157-428 70-343 (604)
22 cd05096 PTKc_DDR1 Catalytic do 100.0 1.4E-37 3E-42 339.4 20.1 271 160-466 5-303 (304)
23 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.4E-37 5.2E-42 341.6 21.5 284 161-463 1-289 (338)
24 KOG0659 Cdk activating kinase 100.0 1.3E-37 2.8E-42 320.9 17.4 277 160-464 2-281 (318)
25 cd05108 PTKc_EGFR Catalytic do 100.0 2.5E-37 5.5E-42 339.7 20.3 260 160-472 7-272 (316)
26 KOG4721 Serine/threonine prote 100.0 2E-38 4.4E-43 351.3 11.2 257 149-476 120-376 (904)
27 KOG0661 MAPK related serine/th 100.0 2.7E-38 5.9E-43 347.0 11.7 275 159-464 9-291 (538)
28 cd07862 STKc_CDK6 Catalytic do 100.0 8E-37 1.7E-41 330.3 22.7 277 160-463 1-286 (290)
29 cd05104 PTKc_Kit Catalytic dom 100.0 3.1E-37 6.6E-42 348.5 19.9 267 159-467 34-373 (375)
30 cd05106 PTKc_CSF-1R Catalytic 100.0 3.1E-37 6.7E-42 348.5 19.8 268 160-469 38-373 (374)
31 cd05631 STKc_GRK4 Catalytic do 100.0 5.1E-37 1.1E-41 332.5 20.6 200 161-379 1-203 (285)
32 KOG0578 p21-activated serine/t 100.0 1.9E-37 4.2E-42 347.7 17.6 250 160-463 273-522 (550)
33 PF07714 Pkinase_Tyr: Protein 100.0 1.8E-37 3.9E-42 331.7 16.4 251 164-465 3-259 (259)
34 cd05048 PTKc_Ror Catalytic Dom 100.0 5.2E-37 1.1E-41 330.2 19.2 265 160-467 5-282 (283)
35 KOG0583 Serine/threonine prote 100.0 6.2E-37 1.4E-41 344.4 20.0 251 157-462 14-273 (370)
36 cd07848 STKc_CDKL5 Catalytic d 100.0 1.3E-36 2.9E-41 328.0 21.7 280 160-463 1-283 (287)
37 cd05064 PTKc_EphR_A10 Catalyti 100.0 7.6E-37 1.6E-41 327.3 19.4 256 160-468 5-265 (266)
38 cd06649 PKc_MEK2 Catalytic dom 100.0 1.3E-36 2.8E-41 337.0 21.5 199 159-379 4-204 (331)
39 KOG0194 Protein tyrosine kinas 100.0 1.4E-37 3E-42 352.9 14.1 262 159-473 156-425 (474)
40 KOG3653 Transforming growth fa 100.0 6.9E-37 1.5E-41 335.8 18.7 279 160-470 210-505 (534)
41 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.5E-36 3.2E-41 329.4 20.9 201 160-380 5-207 (288)
42 cd05062 PTKc_IGF-1R Catalytic 100.0 9.9E-37 2.1E-41 327.7 19.3 266 158-466 4-276 (277)
43 cd05612 STKc_PRKX_like Catalyt 100.0 4.1E-37 8.9E-42 334.4 16.4 197 160-379 1-200 (291)
44 cd05054 PTKc_VEGFR Catalytic d 100.0 1.3E-36 2.7E-41 338.6 20.0 270 160-470 7-335 (337)
45 cd05052 PTKc_Abl Catalytic dom 100.0 2.3E-36 5E-41 322.4 21.1 256 160-468 6-262 (263)
46 KOG4278 Protein tyrosine kinas 100.0 1.5E-37 3.2E-42 346.1 11.8 260 158-470 265-525 (1157)
47 cd05035 PTKc_Axl_like Catalyti 100.0 3.2E-36 6.9E-41 321.2 21.6 265 162-468 1-272 (273)
48 cd05571 STKc_PKB Catalytic dom 100.0 6.4E-37 1.4E-41 338.3 16.6 242 166-463 1-250 (323)
49 cd05111 PTK_HER3 Pseudokinase 100.0 3.4E-36 7.3E-41 324.8 21.8 258 160-470 7-270 (279)
50 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 9.7E-37 2.1E-41 337.8 17.9 254 160-464 1-257 (333)
51 cd05033 PTKc_EphR Catalytic do 100.0 3.9E-36 8.4E-41 320.8 21.3 258 159-468 3-265 (266)
52 cd08228 STKc_Nek6 Catalytic do 100.0 4.2E-36 9.2E-41 320.0 21.5 262 160-469 2-266 (267)
53 cd05093 PTKc_TrkB Catalytic do 100.0 2.1E-36 4.6E-41 327.5 19.1 269 160-471 5-282 (288)
54 cd05049 PTKc_Trk Catalytic dom 100.0 2.8E-36 6.1E-41 323.6 19.8 264 160-466 5-279 (280)
55 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.1E-36 6.7E-41 324.9 20.1 270 162-469 6-282 (283)
56 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6.5E-36 1.4E-40 326.4 22.8 202 159-380 4-207 (303)
57 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.8E-36 1E-40 323.2 21.4 274 159-468 3-283 (284)
58 PHA03212 serine/threonine kina 100.0 7.4E-36 1.6E-40 339.4 23.8 194 160-379 92-285 (391)
59 PTZ00263 protein kinase A cata 100.0 1.1E-36 2.3E-41 337.6 16.2 197 160-379 18-217 (329)
60 cd05075 PTKc_Axl Catalytic dom 100.0 8.2E-36 1.8E-40 318.7 22.3 265 162-468 1-271 (272)
61 cd05585 STKc_YPK1_like Catalyt 100.0 1E-36 2.2E-41 334.9 15.6 192 168-379 1-195 (312)
62 cd05094 PTKc_TrkC Catalytic do 100.0 3.5E-36 7.6E-41 326.4 19.4 268 160-470 5-284 (291)
63 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.7E-36 8E-41 342.8 20.6 269 159-469 36-398 (400)
64 PTZ00267 NIMA-related protein 100.0 2.4E-36 5.3E-41 352.0 19.5 254 161-463 68-322 (478)
65 cd05045 PTKc_RET Catalytic dom 100.0 5.4E-36 1.2E-40 324.4 20.8 267 161-470 1-288 (290)
66 KOG0201 Serine/threonine prote 100.0 1.8E-37 3.9E-42 338.5 9.1 249 160-463 13-262 (467)
67 cd05084 PTKc_Fes Catalytic dom 100.0 7E-36 1.5E-40 316.0 20.9 249 166-466 1-251 (252)
68 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.5E-36 5.4E-41 320.7 17.3 257 158-468 4-261 (261)
69 PTZ00283 serine/threonine prot 100.0 2.3E-36 5E-41 353.5 18.6 267 154-464 26-297 (496)
70 cd05114 PTKc_Tec_Rlk Catalytic 100.0 8.8E-36 1.9E-40 316.3 21.1 251 160-465 4-255 (256)
71 KOG0597 Serine-threonine prote 100.0 8.1E-37 1.8E-41 339.2 13.6 247 160-463 2-250 (808)
72 cd05072 PTKc_Lyn Catalytic dom 100.0 6.1E-36 1.3E-40 318.1 19.8 254 160-467 6-260 (261)
73 cd05595 STKc_PKB_beta Catalyti 100.0 2.5E-36 5.5E-41 333.7 17.5 242 166-463 1-250 (323)
74 cd05068 PTKc_Frk_like Catalyti 100.0 1.1E-35 2.5E-40 316.3 21.8 255 159-467 5-260 (261)
75 cd05109 PTKc_HER2 Catalytic do 100.0 7.7E-36 1.7E-40 321.1 20.7 260 159-471 6-271 (279)
76 KOG0616 cAMP-dependent protein 100.0 1.7E-36 3.7E-41 316.6 15.0 245 160-428 44-302 (355)
77 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2E-35 4.3E-40 314.1 23.3 262 160-469 2-266 (267)
78 KOG1094 Discoidin domain recep 100.0 7.7E-37 1.7E-41 340.4 12.7 264 160-468 538-804 (807)
79 cd06650 PKc_MEK1 Catalytic dom 100.0 1.2E-35 2.5E-40 330.0 22.2 200 159-379 4-204 (333)
80 cd05593 STKc_PKB_gamma Catalyt 100.0 3.4E-36 7.3E-41 333.6 17.8 243 166-464 1-251 (328)
81 cd05036 PTKc_ALK_LTK Catalytic 100.0 7.5E-36 1.6E-40 321.2 19.5 263 158-466 4-276 (277)
82 cd07863 STKc_CDK4 Catalytic do 100.0 1.8E-35 3.9E-40 319.1 22.4 279 161-463 1-284 (288)
83 cd05032 PTKc_InsR_like Catalyt 100.0 7.5E-36 1.6E-40 319.8 19.3 265 159-466 5-276 (277)
84 cd08529 STKc_FA2-like Catalyti 100.0 1.9E-35 4E-40 312.3 21.8 250 161-463 1-252 (256)
85 cd05043 PTK_Ryk Pseudokinase d 100.0 1.2E-35 2.6E-40 319.5 20.4 269 159-471 5-279 (280)
86 cd05090 PTKc_Ror1 Catalytic do 100.0 9.7E-36 2.1E-40 321.0 19.7 265 160-467 5-282 (283)
87 PLN00034 mitogen-activated pro 100.0 7.8E-36 1.7E-40 333.7 19.5 248 161-464 75-328 (353)
88 KOG0660 Mitogen-activated prot 100.0 2.8E-36 6.1E-41 323.5 15.0 291 154-463 16-309 (359)
89 cd06646 STKc_MAP4K5 Catalytic 100.0 8.5E-36 1.8E-40 318.0 18.2 255 160-465 9-266 (267)
90 KOG0585 Ca2+/calmodulin-depend 100.0 7.8E-36 1.7E-40 327.2 18.0 260 156-465 93-373 (576)
91 cd08229 STKc_Nek7 Catalytic do 100.0 1.4E-35 2.9E-40 316.1 19.0 261 160-468 2-265 (267)
92 cd06637 STKc_TNIK Catalytic do 100.0 1.4E-35 3E-40 316.9 19.1 259 157-463 3-268 (272)
93 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.4E-35 3.1E-40 318.0 19.2 273 160-468 4-283 (284)
94 cd05053 PTKc_FGFR Catalytic do 100.0 1.2E-35 2.6E-40 321.6 18.7 269 158-469 10-292 (293)
95 cd05605 STKc_GRK4_like Catalyt 100.0 1.6E-35 3.4E-40 320.8 19.4 200 161-379 1-203 (285)
96 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.9E-35 4.2E-40 329.4 20.6 270 160-470 7-341 (343)
97 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.2E-36 9E-41 334.0 15.2 254 160-464 1-285 (350)
98 cd05061 PTKc_InsR Catalytic do 100.0 1.7E-35 3.7E-40 320.4 19.5 268 158-468 4-278 (288)
99 cd07853 STKc_NLK Catalytic dom 100.0 2.1E-35 4.5E-40 332.5 20.9 283 161-464 1-288 (372)
100 cd05091 PTKc_Ror2 Catalytic do 100.0 1E-35 2.2E-40 320.5 17.4 264 161-467 6-282 (283)
101 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.5E-35 5.4E-40 314.6 20.2 258 159-468 4-267 (268)
102 cd05055 PTKc_PDGFR Catalytic d 100.0 2.6E-35 5.6E-40 322.2 20.8 259 160-468 35-301 (302)
103 PTZ00426 cAMP-dependent protei 100.0 5.7E-36 1.2E-40 333.9 15.8 197 160-379 30-230 (340)
104 KOG0658 Glycogen synthase kina 100.0 1.9E-36 4.2E-41 325.3 11.4 279 161-463 25-305 (364)
105 cd05110 PTKc_HER4 Catalytic do 100.0 2E-35 4.3E-40 322.8 19.7 263 160-475 7-275 (303)
106 cd05589 STKc_PKN Catalytic dom 100.0 1.2E-35 2.7E-40 328.0 18.1 197 162-379 1-203 (324)
107 cd05071 PTKc_Src Catalytic dom 100.0 3.5E-35 7.5E-40 313.7 20.9 254 160-468 6-260 (262)
108 cd06638 STKc_myosinIIIA Cataly 100.0 1.9E-35 4.1E-40 318.6 18.9 270 150-464 8-283 (286)
109 cd05599 STKc_NDR_like Catalyti 100.0 7E-36 1.5E-40 334.8 16.0 202 160-379 1-241 (364)
110 cd05092 PTKc_TrkA Catalytic do 100.0 1.9E-35 4.1E-40 318.8 18.7 264 160-466 5-279 (280)
111 cd06625 STKc_MEKK3_like Cataly 100.0 4.9E-35 1.1E-39 310.8 21.5 253 160-464 2-260 (263)
112 cd05060 PTKc_Syk_like Catalyti 100.0 4.8E-35 1E-39 310.8 21.4 249 166-468 1-255 (257)
113 cd05607 STKc_GRK7 Catalytic do 100.0 2.8E-35 6E-40 317.6 19.8 247 168-464 1-250 (277)
114 KOG1989 ARK protein kinase fam 100.0 2.6E-35 5.6E-40 345.5 21.0 271 159-476 36-319 (738)
115 cd05608 STKc_GRK1 Catalytic do 100.0 2.1E-35 4.6E-40 319.0 18.9 196 168-379 1-199 (280)
116 cd05082 PTKc_Csk Catalytic dom 100.0 4.5E-35 9.7E-40 310.9 20.9 250 160-468 6-256 (256)
117 cd05594 STKc_PKB_alpha Catalyt 100.0 5.7E-36 1.2E-40 330.8 14.6 243 166-464 1-252 (325)
118 KOG0588 Serine/threonine prote 100.0 8.5E-36 1.8E-40 337.4 16.2 198 161-379 13-214 (786)
119 cd05626 STKc_LATS2 Catalytic d 100.0 1.5E-35 3.3E-40 335.0 18.4 201 161-379 2-250 (381)
120 cd05116 PTKc_Syk Catalytic dom 100.0 4.3E-35 9.3E-40 311.5 20.6 247 167-467 2-254 (257)
121 cd05089 PTKc_Tie1 Catalytic do 100.0 5.2E-35 1.1E-39 318.3 21.7 268 160-473 2-280 (297)
122 KOG2345 Serine/threonine prote 100.0 5.9E-36 1.3E-40 306.0 13.1 272 158-468 19-300 (302)
123 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.9E-35 6.4E-40 321.8 19.5 269 160-471 18-302 (307)
124 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.1E-35 6.7E-40 320.9 19.6 269 159-470 14-298 (304)
125 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.4E-35 1.2E-39 311.0 20.9 253 160-467 6-259 (260)
126 PTZ00284 protein kinase; Provi 100.0 5.1E-35 1.1E-39 339.8 22.6 204 153-380 122-348 (467)
127 cd05097 PTKc_DDR_like Catalyti 100.0 4.2E-35 9.1E-40 318.5 20.5 271 160-466 5-294 (295)
128 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.2E-35 1.1E-39 320.2 21.3 277 160-463 6-285 (309)
129 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3E-35 6.4E-40 313.2 18.9 252 160-466 4-256 (256)
130 cd05601 STKc_CRIK Catalytic do 100.0 5.5E-36 1.2E-40 331.1 13.7 202 160-379 1-211 (330)
131 cd05059 PTKc_Tec_like Catalyti 100.0 4.3E-35 9.4E-40 311.3 20.1 250 161-465 5-255 (256)
132 cd05065 PTKc_EphR_B Catalytic 100.0 3.9E-35 8.5E-40 313.6 19.8 256 161-468 5-268 (269)
133 cd05051 PTKc_DDR Catalytic dom 100.0 4.1E-35 8.8E-40 317.5 20.1 272 159-466 4-295 (296)
134 cd05039 PTKc_Csk_like Catalyti 100.0 8.2E-35 1.8E-39 308.5 22.0 251 159-468 5-256 (256)
135 cd05587 STKc_cPKC Catalytic do 100.0 2.1E-35 4.6E-40 326.1 18.1 199 161-379 1-203 (324)
136 cd05628 STKc_NDR1 Catalytic do 100.0 2.3E-35 4.9E-40 331.3 18.5 202 160-379 1-238 (363)
137 cd06624 STKc_ASK Catalytic dom 100.0 6E-35 1.3E-39 312.0 20.7 257 155-463 3-264 (268)
138 cd05591 STKc_nPKC_epsilon Cata 100.0 1.4E-35 3.1E-40 327.0 16.4 194 166-379 1-198 (321)
139 cd00192 PTKc Catalytic domain 100.0 7.3E-35 1.6E-39 307.2 21.0 257 166-466 1-262 (262)
140 cd05592 STKc_nPKC_theta_delta 100.0 2.1E-35 4.4E-40 325.5 17.5 194 166-379 1-198 (316)
141 cd05115 PTKc_Zap-70 Catalytic 100.0 6.4E-35 1.4E-39 311.1 20.7 249 167-468 2-255 (257)
142 cd07876 STKc_JNK2 Catalytic do 100.0 8.1E-35 1.8E-39 326.0 22.5 204 158-380 19-225 (359)
143 cd05058 PTKc_Met_Ron Catalytic 100.0 5.7E-35 1.2E-39 310.4 20.2 253 166-469 1-260 (262)
144 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.6E-35 1.4E-39 310.3 20.6 254 159-467 5-259 (260)
145 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.6E-35 1E-39 316.2 19.7 273 160-468 4-283 (284)
146 KOG0605 NDR and related serine 100.0 3.2E-35 7E-40 327.6 18.8 252 158-428 139-450 (550)
147 cd05614 STKc_MSK2_N N-terminal 100.0 2.1E-35 4.5E-40 326.8 17.2 200 161-379 1-209 (332)
148 KOG0663 Protein kinase PITSLRE 100.0 1.4E-35 3.1E-40 313.6 14.9 279 160-463 76-360 (419)
149 cd05584 STKc_p70S6K Catalytic 100.0 2.4E-35 5.2E-40 325.8 17.5 242 166-463 2-255 (323)
150 cd05590 STKc_nPKC_eta Catalyti 100.0 1.8E-35 3.9E-40 326.5 16.4 239 166-460 1-243 (320)
151 cd05629 STKc_NDR_like_fungal C 100.0 1.6E-35 3.5E-40 334.0 16.4 202 160-379 1-250 (377)
152 PF00069 Pkinase: Protein kina 100.0 4.4E-35 9.6E-40 309.8 18.7 253 162-463 1-256 (260)
153 cd06654 STKc_PAK1 Catalytic do 100.0 6.7E-35 1.4E-39 317.9 20.5 250 160-463 20-269 (296)
154 cd05050 PTKc_Musk Catalytic do 100.0 4.8E-35 1E-39 316.4 19.2 265 159-466 4-287 (288)
155 cd05107 PTKc_PDGFR_beta Cataly 100.0 5.8E-35 1.2E-39 333.1 20.7 269 159-469 36-400 (401)
156 cd05095 PTKc_DDR2 Catalytic do 100.0 5.4E-35 1.2E-39 317.8 19.6 271 160-466 5-295 (296)
157 cd05616 STKc_cPKC_beta Catalyt 100.0 3.3E-35 7.1E-40 324.5 18.0 199 161-379 1-203 (323)
158 cd06645 STKc_MAP4K3 Catalytic 100.0 4E-35 8.7E-40 312.9 18.0 254 159-463 8-264 (267)
159 cd07874 STKc_JNK3 Catalytic do 100.0 4.9E-35 1.1E-39 327.0 19.5 204 157-379 14-220 (355)
160 cd06613 STKc_MAP4K3_like Catal 100.0 1.2E-34 2.7E-39 307.1 21.5 255 159-463 2-259 (262)
161 cd05088 PTKc_Tie2 Catalytic do 100.0 6.4E-35 1.4E-39 319.1 19.8 266 160-471 7-283 (303)
162 PTZ00036 glycogen synthase kin 100.0 7.5E-35 1.6E-39 336.1 21.4 279 158-463 64-350 (440)
163 KOG0694 Serine/threonine prote 100.0 3.6E-35 7.8E-40 335.0 18.3 244 158-458 366-613 (694)
164 cd06612 STKc_MST1_2 Catalytic 100.0 8.2E-35 1.8E-39 307.4 19.9 250 160-463 3-252 (256)
165 cd08219 STKc_Nek3 Catalytic do 100.0 6.2E-35 1.3E-39 309.3 18.9 251 161-464 1-252 (255)
166 cd05056 PTKc_FAK Catalytic dom 100.0 8E-35 1.7E-39 311.4 19.8 257 160-470 6-267 (270)
167 cd05057 PTKc_EGFR_like Catalyt 100.0 9.9E-35 2.2E-39 312.5 20.6 258 160-470 7-270 (279)
168 cd06639 STKc_myosinIIIB Cataly 100.0 1E-34 2.2E-39 314.3 20.7 270 149-463 11-286 (291)
169 cd05099 PTKc_FGFR4 Catalytic d 100.0 7.8E-35 1.7E-39 319.8 19.9 270 160-472 12-297 (314)
170 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.2E-34 2.7E-39 322.1 21.7 285 154-463 9-297 (343)
171 cd05618 STKc_aPKC_iota Catalyt 100.0 3.5E-35 7.5E-40 325.7 17.1 194 166-379 1-198 (329)
172 cd05570 STKc_PKC Catalytic dom 100.0 3.6E-35 7.9E-40 323.6 17.1 242 166-463 1-251 (318)
173 cd07875 STKc_JNK1 Catalytic do 100.0 1E-34 2.2E-39 325.8 20.8 204 158-380 22-228 (364)
174 cd05588 STKc_aPKC Catalytic do 100.0 4.4E-35 9.6E-40 324.6 17.6 194 166-379 1-198 (329)
175 cd06619 PKc_MKK5 Catalytic dom 100.0 1.3E-34 2.8E-39 312.2 20.7 251 160-464 1-253 (279)
176 cd05596 STKc_ROCK Catalytic do 100.0 2.7E-35 5.8E-40 332.2 15.9 255 158-464 41-304 (370)
177 cd05069 PTKc_Yes Catalytic dom 100.0 1.6E-34 3.5E-39 307.6 21.1 253 160-467 6-259 (260)
178 cd05598 STKc_LATS Catalytic do 100.0 2.4E-35 5.2E-40 332.3 15.5 203 160-380 1-247 (376)
179 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.3E-34 2.8E-39 310.0 20.3 257 166-466 1-268 (269)
180 cd05575 STKc_SGK Catalytic dom 100.0 4.2E-35 9E-40 323.6 17.0 238 166-459 1-242 (323)
181 cd05625 STKc_LATS1 Catalytic d 100.0 3.7E-35 8.1E-40 331.6 16.9 201 161-379 2-250 (382)
182 cd05066 PTKc_EphR_A Catalytic 100.0 1.3E-34 2.9E-39 309.5 20.2 257 160-468 4-266 (267)
183 cd05042 PTKc_Aatyk Catalytic d 100.0 1.4E-34 3E-39 309.4 20.2 257 166-466 1-268 (269)
184 KOG0611 Predicted serine/threo 100.0 1.7E-35 3.8E-40 317.5 13.1 249 159-465 52-304 (668)
185 cd05619 STKc_nPKC_theta Cataly 100.0 6.9E-35 1.5E-39 321.5 18.3 194 166-379 1-198 (316)
186 cd07868 STKc_CDK8 Catalytic do 100.0 2.1E-34 4.7E-39 315.9 22.1 205 165-379 6-218 (317)
187 cd05621 STKc_ROCK2 Catalytic d 100.0 4.1E-35 8.9E-40 330.8 16.8 205 155-379 38-249 (370)
188 cd05632 STKc_GRK5 Catalytic do 100.0 1.4E-34 3E-39 313.4 20.1 199 162-379 2-203 (285)
189 cd05040 PTKc_Ack_like Catalyti 100.0 1.4E-34 3E-39 306.6 19.6 250 166-466 1-256 (257)
190 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.1E-34 2.3E-39 316.3 19.2 276 160-463 6-285 (301)
191 PHA03207 serine/threonine kina 100.0 1.2E-34 2.7E-39 329.1 20.2 198 159-380 91-290 (392)
192 cd08223 STKc_Nek4 Catalytic do 100.0 3.6E-34 7.7E-39 303.1 22.4 251 161-463 1-253 (257)
193 cd05620 STKc_nPKC_delta Cataly 100.0 5.2E-35 1.1E-39 322.3 16.6 194 166-379 1-198 (316)
194 cd05034 PTKc_Src_like Catalyti 100.0 2E-34 4.4E-39 306.0 20.4 255 159-467 5-260 (261)
195 KOG1025 Epidermal growth facto 100.0 5.1E-35 1.1E-39 335.3 16.8 260 163-475 699-964 (1177)
196 cd05582 STKc_RSK_N N-terminal 100.0 1.4E-35 3E-40 326.5 11.7 239 166-460 2-245 (318)
197 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.3E-34 2.8E-39 312.2 19.0 239 167-465 2-273 (274)
198 cd07861 STKc_CDK1_euk Catalyti 100.0 3E-34 6.5E-39 308.7 21.8 201 161-379 1-204 (285)
199 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.7E-34 5.9E-39 308.8 21.4 274 160-463 1-282 (286)
200 PHA03211 serine/threonine kina 100.0 1.7E-34 3.8E-39 334.1 21.2 196 159-378 168-363 (461)
201 cd06615 PKc_MEK Catalytic doma 100.0 1.4E-34 3E-39 317.1 19.3 199 160-379 1-200 (308)
202 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.6E-34 3.4E-39 311.0 19.4 274 160-463 1-282 (286)
203 cd08221 STKc_Nek9 Catalytic do 100.0 2.6E-34 5.5E-39 304.4 20.6 252 161-465 1-254 (256)
204 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.2E-34 2.7E-39 312.9 18.4 263 160-466 5-268 (284)
205 cd05630 STKc_GRK6 Catalytic do 100.0 2.3E-34 5.1E-39 311.9 20.7 251 162-463 2-260 (285)
206 cd05047 PTKc_Tie Catalytic dom 100.0 2.4E-34 5.3E-39 308.3 20.5 258 166-469 1-269 (270)
207 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2E-34 4.4E-39 310.2 19.9 266 150-463 6-278 (282)
208 cd05615 STKc_cPKC_alpha Cataly 100.0 1E-34 2.2E-39 320.9 18.0 199 161-379 1-203 (323)
209 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.9E-34 4E-39 319.7 20.1 268 160-470 12-295 (334)
210 cd06655 STKc_PAK2 Catalytic do 100.0 2.9E-34 6.2E-39 313.1 21.2 250 160-463 19-268 (296)
211 cd06643 STKc_SLK Catalytic dom 100.0 2.1E-34 4.6E-39 310.4 19.9 250 162-463 7-261 (282)
212 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.8E-34 8.2E-39 305.0 21.6 250 161-463 1-263 (267)
213 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.7E-34 5.8E-39 307.4 20.5 240 166-465 1-261 (262)
214 cd05604 STKc_SGK3 Catalytic do 100.0 4.2E-35 9.1E-40 323.9 14.6 241 166-462 1-245 (325)
215 cd05044 PTKc_c-ros Catalytic d 100.0 1.7E-34 3.6E-39 308.1 18.7 255 166-466 1-268 (269)
216 PHA03209 serine/threonine kina 100.0 2.2E-34 4.8E-39 322.9 20.6 193 158-377 64-256 (357)
217 cd07839 STKc_CDK5 Catalytic do 100.0 2.5E-34 5.3E-39 309.6 20.1 271 161-463 1-280 (284)
218 cd05041 PTKc_Fes_like Catalyti 100.0 3.9E-34 8.4E-39 302.1 21.1 248 166-466 1-250 (251)
219 KOG0589 Serine/threonine prote 100.0 2.8E-35 6.2E-40 328.6 13.1 252 160-464 4-258 (426)
220 cd06651 STKc_MEKK3 Catalytic d 100.0 4.4E-34 9.6E-39 305.3 21.6 204 160-379 2-211 (266)
221 cd06609 STKc_MST3_like Catalyt 100.0 3.4E-34 7.3E-39 307.2 20.7 249 160-463 1-250 (274)
222 cd08218 STKc_Nek1 Catalytic do 100.0 2.7E-34 5.8E-39 304.2 19.6 250 161-463 1-252 (256)
223 cd06656 STKc_PAK3 Catalytic do 100.0 2.3E-34 5E-39 313.8 19.5 251 159-463 18-268 (297)
224 cd08528 STKc_Nek10 Catalytic d 100.0 3.5E-34 7.5E-39 306.0 20.2 256 161-466 1-268 (269)
225 cd05602 STKc_SGK1 Catalytic do 100.0 7.1E-35 1.5E-39 322.1 15.4 241 166-462 1-245 (325)
226 cd07867 STKc_CDC2L6 Catalytic 100.0 8E-34 1.7E-38 310.8 23.5 205 165-379 6-218 (317)
227 cd06644 STKc_STK10_LOK Catalyt 100.0 4.1E-34 8.9E-39 310.0 20.8 252 160-463 12-268 (292)
228 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3E-34 6.5E-39 303.7 19.2 239 166-466 1-259 (259)
229 cd05603 STKc_SGK2 Catalytic do 100.0 6.9E-35 1.5E-39 321.4 14.9 194 166-379 1-198 (321)
230 cd08217 STKc_Nek2 Catalytic do 100.0 5.9E-34 1.3E-38 301.2 21.3 258 161-464 1-262 (265)
231 cd06629 STKc_MAPKKK_Bck1_like 100.0 4E-34 8.7E-39 306.0 20.2 255 161-463 2-268 (272)
232 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 8.6E-35 1.9E-39 309.7 14.9 241 166-466 1-258 (258)
233 cd05085 PTKc_Fer Catalytic dom 100.0 5.1E-34 1.1E-38 301.0 20.7 247 166-466 1-249 (250)
234 cd06652 STKc_MEKK2 Catalytic d 100.0 6.6E-34 1.4E-38 303.5 21.7 204 160-379 2-211 (265)
235 cd08227 PK_STRAD_alpha Pseudok 100.0 2.1E-34 4.6E-39 318.3 18.5 201 164-380 2-213 (327)
236 cd06610 STKc_OSR1_SPAK Catalyt 100.0 5.5E-34 1.2E-38 302.6 20.8 259 160-463 1-263 (267)
237 KOG0580 Serine/threonine prote 100.0 8.1E-35 1.7E-39 296.6 13.6 250 159-464 21-273 (281)
238 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8.5E-34 1.8E-38 307.1 22.5 261 160-463 1-265 (287)
239 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.8E-34 1E-38 305.2 20.2 265 162-468 1-272 (273)
240 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.7E-34 3.7E-39 319.7 17.1 194 166-379 1-198 (327)
241 KOG2052 Activin A type IB rece 100.0 2.3E-34 4.9E-39 314.0 17.7 271 159-470 210-505 (513)
242 cd06605 PKc_MAPKK Catalytic do 100.0 2.3E-34 5E-39 305.9 17.5 254 160-463 1-256 (265)
243 cd06611 STKc_SLK_like Catalyti 100.0 2.6E-34 5.6E-39 309.1 18.1 254 159-464 4-262 (280)
244 cd06632 STKc_MEKK1_plant Catal 100.0 5.4E-34 1.2E-38 301.1 20.1 248 161-463 1-254 (258)
245 PRK13184 pknD serine/threonine 100.0 4.4E-34 9.5E-39 346.4 21.9 270 160-470 2-292 (932)
246 cd07849 STKc_ERK1_2_like Catal 100.0 6.5E-34 1.4E-38 315.6 21.4 283 158-464 3-292 (336)
247 cd06608 STKc_myosinIII_like Ca 100.0 4.6E-34 9.9E-39 304.2 19.3 262 157-463 3-271 (275)
248 cd05112 PTKc_Itk Catalytic dom 100.0 7.8E-34 1.7E-38 300.7 20.8 251 160-465 4-255 (256)
249 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.2E-34 7E-39 308.2 18.0 248 161-464 5-253 (277)
250 KOG4279 Serine/threonine prote 100.0 8.7E-35 1.9E-39 327.5 14.0 246 166-463 581-831 (1226)
251 cd05073 PTKc_Hck Catalytic dom 100.0 8.9E-34 1.9E-38 302.0 21.1 254 159-467 5-259 (260)
252 smart00219 TyrKc Tyrosine kina 100.0 8.7E-34 1.9E-38 299.2 20.8 252 162-465 1-258 (258)
253 cd05622 STKc_ROCK1 Catalytic d 100.0 2.2E-34 4.7E-39 325.0 17.2 208 152-379 35-249 (371)
254 cd06631 STKc_YSK4 Catalytic do 100.0 9.4E-34 2E-38 302.0 21.1 251 161-463 1-261 (265)
255 cd05083 PTKc_Chk Catalytic dom 100.0 4.9E-34 1.1E-38 302.6 18.8 247 160-467 6-253 (254)
256 cd07860 STKc_CDK2_3 Catalytic 100.0 1.3E-33 2.7E-38 304.1 22.3 200 161-379 1-203 (284)
257 cd07832 STKc_CCRK Catalytic do 100.0 6.4E-34 1.4E-38 305.9 19.9 274 161-463 1-281 (286)
258 cd08220 STKc_Nek8 Catalytic do 100.0 8E-34 1.7E-38 299.9 20.2 249 161-463 1-252 (256)
259 cd07842 STKc_CDK8_like Catalyt 100.0 1.8E-33 3.8E-38 307.2 23.6 209 161-381 1-220 (316)
260 cd05597 STKc_DMPK_like Catalyt 100.0 4.1E-34 9E-39 317.1 18.6 202 160-379 1-210 (331)
261 cd06640 STKc_MST4 Catalytic do 100.0 8.3E-34 1.8E-38 305.3 20.4 248 161-464 5-253 (277)
262 cd05046 PTK_CCK4 Pseudokinase 100.0 5.7E-34 1.2E-38 305.3 18.9 263 160-466 5-274 (275)
263 cd05609 STKc_MAST Catalytic do 100.0 7.5E-34 1.6E-38 310.4 20.2 257 160-467 1-273 (305)
264 KOG4257 Focal adhesion tyrosin 100.0 1.5E-34 3.2E-39 323.4 14.5 254 163-470 392-651 (974)
265 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.2E-33 2.7E-38 302.8 21.2 256 166-466 1-267 (268)
266 KOG0594 Protein kinase PCTAIRE 100.0 5.1E-34 1.1E-38 306.9 18.0 281 160-464 11-302 (323)
267 cd06623 PKc_MAPKK_plant_like C 100.0 1.4E-33 3E-38 299.0 21.0 254 160-464 1-256 (264)
268 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.5E-33 3.2E-38 305.2 21.6 203 158-380 3-207 (291)
269 cd05624 STKc_MRCK_beta Catalyt 100.0 3.3E-34 7.1E-39 317.9 16.8 202 160-379 1-210 (331)
270 cd05623 STKc_MRCK_alpha Cataly 100.0 4.8E-34 1E-38 316.6 17.7 202 160-379 1-210 (332)
271 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.3E-33 2.7E-38 303.5 20.4 253 160-463 1-260 (283)
272 cd06626 STKc_MEKK4 Catalytic d 100.0 2.2E-33 4.8E-38 297.9 21.8 253 161-463 1-260 (264)
273 cd07833 STKc_CDKL Catalytic do 100.0 1.1E-33 2.4E-38 304.4 19.7 201 160-379 1-204 (288)
274 cd05627 STKc_NDR2 Catalytic do 100.0 3E-34 6.4E-39 321.8 15.7 250 160-428 1-298 (360)
275 cd07841 STKc_CDK7 Catalytic do 100.0 2.2E-33 4.8E-38 304.6 21.8 275 161-463 1-281 (298)
276 PTZ00266 NIMA-related protein 100.0 5.6E-34 1.2E-38 346.7 18.9 261 156-463 9-294 (1021)
277 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.2E-33 2.7E-38 304.7 19.4 254 160-463 1-261 (286)
278 cd07844 STKc_PCTAIRE_like Cata 100.0 2.5E-33 5.3E-38 303.2 21.7 202 159-380 4-207 (291)
279 cd05574 STKc_phototropin_like 100.0 1.6E-33 3.5E-38 308.8 20.5 252 160-461 1-282 (316)
280 cd06658 STKc_PAK5 Catalytic do 100.0 6.6E-34 1.4E-38 309.7 17.1 248 163-464 25-272 (292)
281 cd05586 STKc_Sck1_like Catalyt 100.0 2.6E-34 5.7E-39 318.0 14.1 192 168-379 1-199 (330)
282 cd06630 STKc_MEKK1 Catalytic d 100.0 1.3E-33 2.9E-38 300.6 18.6 254 161-463 1-263 (268)
283 KOG0667 Dual-specificity tyros 100.0 1E-33 2.2E-38 323.3 18.5 197 161-380 187-391 (586)
284 cd06659 STKc_PAK6 Catalytic do 100.0 1.6E-33 3.4E-38 307.5 18.4 247 164-464 25-271 (297)
285 cd05580 STKc_PKA Catalytic dom 100.0 1.9E-33 4.1E-38 304.8 18.9 197 160-379 1-200 (290)
286 cd07855 STKc_ERK5 Catalytic do 100.0 3E-33 6.5E-38 310.1 20.8 286 159-464 4-294 (334)
287 cd07840 STKc_CDK9_like Catalyt 100.0 3.9E-33 8.5E-38 299.2 21.0 275 162-463 1-283 (287)
288 cd06606 STKc_MAPKKK Catalytic 100.0 4.2E-33 9.2E-38 292.5 20.8 254 161-463 1-256 (260)
289 cd08225 STKc_Nek5 Catalytic do 100.0 2.2E-33 4.7E-38 296.7 18.7 250 161-463 1-253 (257)
290 cd06917 STKc_NAK1_like Catalyt 100.0 2.9E-33 6.2E-38 300.2 19.9 248 161-463 2-254 (277)
291 cd07850 STKc_JNK Catalytic dom 100.0 3.8E-33 8.3E-38 311.7 21.1 204 157-379 13-219 (353)
292 cd06647 STKc_PAK_I Catalytic d 100.0 2.7E-33 5.8E-38 304.8 19.4 251 160-464 19-269 (293)
293 cd05122 PKc_STE Catalytic doma 100.0 5.8E-33 1.3E-37 290.3 20.7 250 161-463 1-250 (253)
294 cd07831 STKc_MOK Catalytic dom 100.0 7E-33 1.5E-37 297.3 21.6 275 162-463 1-278 (282)
295 cd07865 STKc_CDK9 Catalytic do 100.0 7E-33 1.5E-37 301.3 21.9 208 159-379 11-226 (310)
296 cd07835 STKc_CDK1_like Catalyt 100.0 6.6E-33 1.4E-37 298.3 21.5 199 162-379 1-202 (283)
297 cd07837 STKc_CdkB_plant Cataly 100.0 5.9E-33 1.3E-37 300.5 21.2 283 160-463 1-290 (295)
298 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5E-33 1.1E-37 308.9 21.1 282 158-464 3-291 (337)
299 cd07852 STKc_MAPK15 Catalytic 100.0 6E-33 1.3E-37 307.8 21.3 281 158-464 5-295 (337)
300 cd05578 STKc_Yank1 Catalytic d 100.0 2.2E-33 4.7E-38 298.0 16.9 247 161-461 1-252 (258)
301 cd06641 STKc_MST3 Catalytic do 100.0 8.4E-33 1.8E-37 297.5 21.6 247 162-464 6-253 (277)
302 cd07838 STKc_CDK4_6_like Catal 100.0 1.9E-32 4.1E-37 294.3 24.2 277 162-463 1-283 (287)
303 cd06607 STKc_TAO Catalytic dom 100.0 6.5E-33 1.4E-37 303.3 21.0 248 159-464 14-267 (307)
304 PHA02882 putative serine/threo 100.0 6.3E-33 1.4E-37 302.3 20.5 264 159-465 11-293 (294)
305 cd06648 STKc_PAK_II Catalytic 100.0 7.1E-33 1.5E-37 300.1 20.5 249 161-463 20-268 (285)
306 cd06614 STKc_PAK Catalytic dom 100.0 7.2E-33 1.6E-37 299.1 20.5 255 157-464 16-270 (286)
307 cd07864 STKc_CDK12 Catalytic d 100.0 6.5E-33 1.4E-37 301.1 20.2 209 157-379 4-220 (302)
308 cd07836 STKc_Pho85 Catalytic d 100.0 1.1E-32 2.3E-37 296.5 21.6 273 161-463 1-280 (284)
309 cd07843 STKc_CDC2L1 Catalytic 100.0 7.6E-33 1.7E-37 299.9 20.5 203 160-380 5-210 (293)
310 KOG0199 ACK and related non-re 100.0 6.2E-34 1.3E-38 321.9 11.6 252 163-466 113-370 (1039)
311 cd07845 STKc_CDK10 Catalytic d 100.0 1.3E-32 2.7E-37 301.0 21.5 203 159-379 6-211 (309)
312 KOG0033 Ca2+/calmodulin-depend 100.0 9E-35 2E-39 296.1 3.8 251 159-430 10-274 (355)
313 cd08215 STKc_Nek Catalytic dom 100.0 1E-32 2.3E-37 290.1 19.3 252 161-463 1-254 (258)
314 KOG0032 Ca2+/calmodulin-depend 100.0 1.1E-32 2.5E-37 310.3 20.7 252 158-463 33-292 (382)
315 PLN00009 cyclin-dependent kina 100.0 1.5E-32 3.3E-37 297.8 21.0 201 160-379 2-206 (294)
316 cd06616 PKc_MKK4 Catalytic dom 100.0 4.3E-33 9.3E-38 300.9 16.6 258 161-464 5-267 (288)
317 cd05118 STKc_CMGC Catalytic do 100.0 2E-32 4.3E-37 293.6 21.6 272 162-463 1-279 (283)
318 cd07879 STKc_p38delta_MAPK13 C 100.0 2.3E-32 5E-37 304.4 22.6 278 159-464 14-297 (342)
319 cd06653 STKc_MEKK3_like_1 Cata 100.0 2E-32 4.2E-37 292.3 21.1 204 160-379 2-211 (264)
320 cd05579 STKc_MAST_like Catalyt 100.0 4.4E-33 9.4E-38 294.6 15.9 247 168-466 1-256 (265)
321 cd05633 STKc_GRK3 Catalytic do 100.0 1.6E-32 3.4E-37 296.7 20.5 243 167-464 1-255 (279)
322 cd06627 STKc_Cdc7_like Catalyt 100.0 1.9E-32 4.2E-37 288.2 20.6 248 161-463 1-250 (254)
323 KOG0599 Phosphorylase kinase g 100.0 1.3E-33 2.8E-38 291.2 11.2 253 159-464 16-283 (411)
324 cd08530 STKc_CNK2-like Catalyt 100.0 1.3E-32 2.8E-37 290.3 19.1 250 161-463 1-252 (256)
325 cd05572 STKc_cGK_PKG Catalytic 100.0 2E-32 4.4E-37 291.2 19.7 192 168-380 1-195 (262)
326 cd07866 STKc_BUR1 Catalytic do 100.0 2.5E-32 5.5E-37 297.1 20.9 208 159-379 7-229 (311)
327 KOG0574 STE20-like serine/thre 100.0 8.6E-35 1.9E-39 302.7 1.3 249 162-464 35-283 (502)
328 cd07834 STKc_MAPK Catalytic do 100.0 2.6E-32 5.6E-37 301.1 20.8 285 161-464 1-289 (330)
329 cd05577 STKc_GRK Catalytic dom 100.0 1.6E-32 3.5E-37 295.2 18.8 193 168-379 1-196 (277)
330 cd06635 STKc_TAO1 Catalytic do 100.0 3.2E-32 7E-37 299.6 21.4 248 162-467 27-280 (317)
331 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.4E-32 7.4E-37 301.6 21.6 281 154-463 4-287 (328)
332 PHA03390 pk1 serine/threonine- 100.0 4E-32 8.8E-37 291.6 21.4 251 152-463 6-261 (267)
333 cd08216 PK_STRAD Pseudokinase 100.0 4.1E-32 8.9E-37 297.1 20.9 197 166-380 8-213 (314)
334 cd07830 STKc_MAK_like Catalyti 100.0 3.9E-32 8.4E-37 292.0 20.2 199 162-380 1-202 (283)
335 cd06657 STKc_PAK4 Catalytic do 100.0 2.7E-32 5.9E-37 297.2 19.1 245 165-463 25-269 (292)
336 cd08226 PK_STRAD_beta Pseudoki 100.0 3.7E-32 8E-37 300.6 20.3 199 166-380 4-213 (328)
337 cd05611 STKc_Rim15_like Cataly 100.0 2.2E-32 4.8E-37 290.6 17.3 245 166-466 2-250 (260)
338 KOG0610 Putative serine/threon 100.0 2.4E-32 5.2E-37 296.5 17.6 250 161-427 78-396 (459)
339 PHA03210 serine/threonine kina 100.0 2E-32 4.4E-37 320.8 18.2 204 158-377 146-368 (501)
340 KOG0577 Serine/threonine prote 100.0 1.7E-33 3.7E-38 313.3 8.4 244 162-463 28-277 (948)
341 KOG0584 Serine/threonine prote 100.0 4.4E-33 9.6E-38 315.4 11.7 246 165-463 45-295 (632)
342 cd06618 PKc_MKK7 Catalytic dom 100.0 3.5E-32 7.6E-37 295.7 18.3 252 160-464 15-273 (296)
343 cd07857 STKc_MPK1 Catalytic do 100.0 1.1E-31 2.5E-36 297.2 22.4 204 161-379 1-212 (332)
344 cd05581 STKc_PDK1 Catalytic do 100.0 3.5E-32 7.7E-37 290.8 17.5 249 160-462 1-275 (280)
345 KOG0596 Dual specificity; seri 100.0 7.2E-33 1.6E-37 308.2 12.5 252 160-463 361-626 (677)
346 cd05606 STKc_beta_ARK Catalyti 100.0 9.8E-32 2.1E-36 290.1 21.0 242 167-463 1-254 (278)
347 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.2E-31 2.5E-36 299.0 22.2 283 154-463 9-297 (343)
348 cd07854 STKc_MAPK4_6 Catalytic 100.0 5E-32 1.1E-36 301.6 19.2 284 159-463 4-299 (342)
349 cd05583 STKc_MSK_N N-terminal 100.0 4.8E-32 1E-36 293.0 18.3 256 161-467 1-266 (288)
350 PTZ00024 cyclin-dependent prot 100.0 8.3E-32 1.8E-36 298.2 20.3 274 159-463 7-312 (335)
351 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.2E-31 2.6E-36 299.1 21.4 287 151-464 8-300 (345)
352 cd07829 STKc_CDK_like Catalyti 100.0 9.8E-32 2.1E-36 288.0 18.7 270 162-463 1-278 (282)
353 cd06634 STKc_TAO2 Catalytic do 100.0 1.2E-31 2.6E-36 293.9 19.4 248 160-465 15-268 (308)
354 KOG0579 Ste20-like serine/thre 100.0 4.8E-33 1E-37 310.7 7.9 251 161-463 33-288 (1187)
355 cd06633 STKc_TAO3 Catalytic do 100.0 2.2E-31 4.7E-36 292.8 20.8 244 162-463 23-272 (313)
356 cd05613 STKc_MSK1_N N-terminal 100.0 2E-31 4.3E-36 288.4 20.1 200 161-379 1-210 (290)
357 KOG4717 Serine/threonine prote 100.0 6.3E-32 1.4E-36 296.9 16.1 247 161-463 19-269 (864)
358 cd07851 STKc_p38 Catalytic dom 100.0 8.5E-32 1.8E-36 299.9 17.5 282 157-463 12-297 (343)
359 KOG0200 Fibroblast/platelet-de 100.0 1.2E-31 2.5E-36 320.4 19.1 271 157-469 293-580 (609)
360 cd08222 STKc_Nek11 Catalytic d 100.0 1.5E-31 3.2E-36 284.3 17.5 251 161-463 1-256 (260)
361 KOG4250 TANK binding protein k 100.0 4.4E-32 9.6E-37 310.5 12.4 204 163-379 16-226 (732)
362 KOG1035 eIF-2alpha kinase GCN2 100.0 5.5E-32 1.2E-36 322.7 12.9 260 157-463 476-870 (1351)
363 cd05123 STKc_AGC Catalytic dom 100.0 3.1E-31 6.7E-36 279.1 17.2 237 168-460 1-240 (250)
364 KOG4645 MAPKKK (MAP kinase kin 100.0 8E-33 1.7E-37 331.0 5.1 256 156-463 1231-1493(1509)
365 KOG0666 Cyclin C-dependent kin 100.0 2.3E-31 4.9E-36 279.0 13.4 208 159-379 23-242 (438)
366 cd05610 STKc_MASTL Catalytic d 100.0 8.4E-31 1.8E-35 316.9 20.5 146 160-323 4-152 (669)
367 KOG0586 Serine/threonine prote 100.0 2.1E-31 4.6E-36 301.5 13.7 249 159-464 55-306 (596)
368 KOG0986 G protein-coupled rece 100.0 5E-31 1.1E-35 287.7 12.3 202 159-379 184-388 (591)
369 KOG1024 Receptor-like protein 100.0 1E-30 2.2E-35 280.7 12.0 277 153-473 277-560 (563)
370 KOG0587 Traf2- and Nck-interac 100.0 5.8E-30 1.3E-34 297.7 18.5 266 150-463 9-281 (953)
371 KOG0671 LAMMER dual specificit 100.0 1.1E-30 2.4E-35 281.2 11.0 279 159-463 88-405 (415)
372 KOG0983 Mitogen-activated prot 100.0 9.5E-31 2.1E-35 270.4 9.9 249 163-463 95-348 (391)
373 smart00220 S_TKc Serine/Threon 100.0 1.2E-29 2.6E-34 262.9 18.0 239 172-463 1-240 (244)
374 cd05576 STKc_RPK118_like Catal 100.0 4.5E-30 9.7E-35 270.7 14.9 181 171-379 4-184 (237)
375 PLN03225 Serine/threonine-prot 100.0 1.5E-29 3.3E-34 299.7 20.4 213 158-378 130-380 (566)
376 KOG0607 MAP kinase-interacting 100.0 5.4E-30 1.2E-34 269.3 14.0 255 151-428 74-366 (463)
377 KOG4236 Serine/threonine prote 100.0 1.5E-30 3.3E-35 286.6 10.2 244 165-428 569-824 (888)
378 KOG0612 Rho-associated, coiled 100.0 1.2E-30 2.7E-35 309.0 9.1 255 152-428 67-343 (1317)
379 KOG0669 Cyclin T-dependent kin 100.0 5.9E-31 1.3E-35 269.1 4.9 283 161-464 18-315 (376)
380 KOG0604 MAP kinase-activated p 100.0 2E-30 4.4E-35 271.0 8.0 252 157-428 58-327 (400)
381 KOG0690 Serine/threonine prote 100.0 3.8E-30 8.3E-35 270.6 9.9 201 159-379 167-370 (516)
382 KOG0603 Ribosomal protein S6 k 100.0 2.1E-29 4.6E-34 286.7 13.6 240 159-463 321-562 (612)
383 KOG1006 Mitogen-activated prot 100.0 7.7E-31 1.7E-35 270.3 1.0 255 164-463 68-326 (361)
384 KOG1151 Tousled-like protein k 100.0 8.2E-30 1.8E-34 276.2 6.7 205 160-379 463-686 (775)
385 PLN03224 probable serine/threo 100.0 3.1E-28 6.7E-33 283.1 19.8 218 158-379 143-435 (507)
386 KOG0696 Serine/threonine prote 100.0 3.6E-29 7.8E-34 269.6 10.4 201 160-380 349-553 (683)
387 KOG0662 Cyclin-dependent kinas 100.0 3.6E-28 7.8E-33 237.9 14.2 199 161-379 3-205 (292)
388 KOG1290 Serine/threonine prote 100.0 9.5E-28 2.1E-32 264.4 17.5 137 159-308 77-221 (590)
389 KOG0695 Serine/threonine prote 99.9 4.7E-28 1E-32 255.3 12.7 201 160-380 250-454 (593)
390 KOG0984 Mitogen-activated prot 99.9 4.3E-28 9.4E-33 242.4 8.1 203 161-380 47-255 (282)
391 KOG1027 Serine/threonine prote 99.9 2.6E-28 5.5E-33 283.0 7.4 246 162-462 511-765 (903)
392 cd00180 PKc Catalytic domain o 99.9 1.6E-26 3.5E-31 232.6 19.6 211 168-464 1-214 (215)
393 KOG0664 Nemo-like MAPK-related 99.9 1.5E-28 3.2E-33 253.6 1.8 285 162-466 55-345 (449)
394 KOG0668 Casein kinase II, alph 99.9 3.2E-27 6.9E-32 239.1 10.6 278 158-463 36-321 (338)
395 smart00221 STYKc Protein kinas 99.9 6.1E-26 1.3E-30 233.7 18.0 199 162-379 1-202 (225)
396 KOG0614 cGMP-dependent protein 99.9 1.6E-27 3.4E-32 262.8 5.7 246 161-427 421-681 (732)
397 KOG0608 Warts/lats-like serine 99.9 8.1E-27 1.8E-31 261.8 10.9 204 160-381 629-875 (1034)
398 KOG1152 Signal transduction se 99.9 1.1E-26 2.3E-31 259.8 9.6 198 159-378 560-770 (772)
399 KOG1167 Serine/threonine prote 99.9 1.5E-25 3.3E-30 244.7 9.7 285 156-463 32-380 (418)
400 KOG0670 U4/U6-associated splic 99.9 1.8E-25 3.9E-30 247.1 10.0 206 156-382 428-640 (752)
401 KOG0576 Mitogen-activated prot 99.9 4.8E-26 1E-30 258.2 5.2 254 159-463 14-270 (829)
402 KOG1345 Serine/threonine kinas 99.9 5.9E-25 1.3E-29 227.5 11.0 255 160-466 24-286 (378)
403 KOG0665 Jun-N-terminal kinase 99.9 2.8E-25 6.2E-30 234.9 7.9 201 159-379 16-219 (369)
404 smart00750 KIND kinase non-cat 99.9 1E-23 2.2E-28 211.5 14.4 171 247-470 1-171 (176)
405 PLN00181 protein SPA1-RELATED; 99.9 6.8E-24 1.5E-28 261.9 10.4 154 212-378 27-216 (793)
406 PRK09188 serine/threonine prot 99.9 5.9E-22 1.3E-26 221.9 15.0 178 156-361 14-210 (365)
407 KOG1164 Casein kinase (serine/ 99.8 4.7E-20 1E-24 204.6 21.8 264 161-471 19-300 (322)
408 COG0515 SPS1 Serine/threonine 99.8 7.7E-20 1.7E-24 193.6 21.8 260 162-464 2-275 (384)
409 KOG0195 Integrin-linked kinase 99.8 6.3E-22 1.4E-26 204.7 5.2 247 164-469 194-447 (448)
410 KOG0590 Checkpoint kinase and 99.8 2.8E-20 6.1E-25 221.0 6.6 254 164-463 322-584 (601)
411 KOG1163 Casein kinase (serine/ 99.8 1.2E-18 2.6E-23 178.4 15.1 274 152-476 8-292 (341)
412 KOG1165 Casein kinase (serine/ 99.8 3.4E-18 7.4E-23 181.9 18.8 200 161-380 29-239 (449)
413 cd05147 RIO1_euk RIO kinase fa 99.8 5.6E-19 1.2E-23 181.6 12.0 139 165-325 2-167 (190)
414 PRK10359 lipopolysaccharide co 99.8 3.8E-19 8.3E-24 186.9 10.6 176 158-371 29-216 (232)
415 KOG1023 Natriuretic peptide re 99.8 2.8E-19 6.2E-24 204.3 10.0 218 211-470 1-226 (484)
416 cd05145 RIO1_like RIO kinase f 99.8 4.6E-18 1E-22 174.5 14.3 140 165-326 2-168 (190)
417 KOG1240 Protein kinase contain 99.8 6E-19 1.3E-23 209.8 7.5 251 161-467 24-294 (1431)
418 KOG1166 Mitotic checkpoint ser 99.7 1.9E-17 4.2E-22 201.0 14.0 201 154-376 692-902 (974)
419 PRK12274 serine/threonine prot 99.7 5.4E-17 1.2E-21 167.7 13.4 187 162-379 4-209 (218)
420 PF14531 Kinase-like: Kinase-l 99.7 2.6E-17 5.7E-22 177.9 10.3 207 162-380 14-253 (288)
421 KOG4158 BRPK/PTEN-induced prot 99.7 3.2E-17 6.9E-22 177.7 10.0 203 215-466 274-512 (598)
422 PRK10345 hypothetical protein; 99.7 1.2E-16 2.6E-21 166.7 13.6 140 162-322 4-156 (210)
423 smart00090 RIO RIO-like kinase 99.7 3.1E-16 6.7E-21 166.8 14.1 142 161-325 29-198 (237)
424 KOG0603 Ribosomal protein S6 k 99.7 2E-17 4.4E-22 189.3 1.8 187 167-379 1-193 (612)
425 cd05144 RIO2_C RIO kinase fami 99.7 1.2E-15 2.5E-20 157.4 14.6 146 152-326 7-176 (198)
426 PRK14879 serine/threonine prot 99.6 1.2E-15 2.6E-20 158.0 13.1 134 166-324 2-143 (211)
427 PRK09605 bifunctional UGMP fam 99.6 2.7E-15 5.9E-20 177.8 14.0 145 151-324 324-476 (535)
428 TIGR03724 arch_bud32 Kae1-asso 99.6 2.9E-15 6.2E-20 153.9 12.0 130 167-324 1-138 (199)
429 KOG0606 Microtubule-associated 99.6 1.1E-15 2.4E-20 182.5 7.7 167 159-380 82-261 (1205)
430 KOG1033 eIF-2alpha kinase PEK/ 99.6 3.8E-16 8.2E-21 176.0 2.8 124 236-372 330-457 (516)
431 cd05119 RIO RIO kinase family, 99.5 3.6E-14 7.8E-19 144.2 12.6 135 165-325 2-164 (187)
432 cd05120 APH_ChoK_like Aminogly 99.5 1.3E-13 2.8E-18 132.5 14.1 135 164-324 2-138 (155)
433 PRK01723 3-deoxy-D-manno-octul 99.5 4.5E-13 9.8E-18 142.8 13.9 140 165-325 36-192 (239)
434 KOG0590 Checkpoint kinase and 99.4 7.6E-14 1.7E-18 166.3 1.1 253 160-427 20-290 (601)
435 KOG1266 Protein kinase [Signal 99.3 1.5E-12 3.2E-17 139.3 7.5 160 209-375 119-280 (458)
436 TIGR01982 UbiB 2-polyprenylphe 99.3 1.9E-11 4.2E-16 141.2 11.9 142 165-326 122-308 (437)
437 cd05151 ChoK Choline Kinase (C 99.2 7.4E-11 1.6E-15 117.5 12.0 127 165-323 3-135 (170)
438 KOG0601 Cyclin-dependent kinas 99.1 4.7E-11 1E-15 137.5 7.1 200 161-379 115-329 (524)
439 PLN03150 hypothetical protein; 99.1 6.9E-11 1.5E-15 142.5 6.7 84 1-84 425-508 (623)
440 cd05146 RIO3_euk RIO kinase fa 99.1 1.2E-09 2.7E-14 112.7 13.7 137 165-325 2-174 (197)
441 PRK04750 ubiB putative ubiquin 99.1 4.6E-10 1E-14 131.9 10.9 148 160-327 120-316 (537)
442 KOG1243 Protein kinase [Genera 99.1 2.7E-09 5.8E-14 124.3 16.2 171 178-374 30-200 (690)
443 PLN03150 hypothetical protein; 98.9 8.1E-10 1.8E-14 133.3 6.5 82 1-82 449-532 (623)
444 cd05154 ACAD10_11_like Acyl-Co 98.9 1E-08 2.3E-13 106.1 14.0 145 166-324 4-206 (223)
445 COG4248 Uncharacterized protei 98.9 2.8E-08 6E-13 110.1 16.4 283 163-476 14-308 (637)
446 KOG0601 Cyclin-dependent kinas 98.9 1.1E-09 2.3E-14 126.4 4.8 200 155-376 260-465 (524)
447 KOG3741 Poly(A) ribonuclease s 98.9 3.6E-08 7.8E-13 111.8 15.6 182 172-376 288-475 (655)
448 COG3642 Mn2+-dependent serine/ 98.8 3.3E-08 7.2E-13 99.8 12.2 129 166-324 2-140 (204)
449 PLN00113 leucine-rich repeat r 98.8 4E-09 8.7E-14 133.8 6.9 84 1-84 482-565 (968)
450 KOG3087 Serine/threonine prote 98.8 5.6E-08 1.2E-12 97.8 11.4 143 164-324 11-165 (229)
451 KOG0606 Microtubule-associated 98.7 2.8E-09 6.1E-14 128.6 1.6 205 158-380 802-1038(1205)
452 PRK15123 lipopolysaccharide co 98.7 2.1E-07 4.5E-12 101.0 14.2 146 166-324 28-194 (268)
453 PF01163 RIO1: RIO1 family; I 98.7 1.2E-07 2.5E-12 97.6 11.5 125 175-325 1-156 (188)
454 COG0478 RIO-like serine/threon 98.5 6.8E-07 1.5E-11 95.3 10.7 134 162-323 93-250 (304)
455 KOG0617 Ras suppressor protein 98.5 2.7E-08 5.9E-13 98.4 0.1 75 1-78 40-114 (264)
456 PRK09902 hypothetical protein; 98.4 4.5E-06 9.8E-11 87.0 14.8 159 152-324 10-179 (216)
457 PF06293 Kdo: Lipopolysacchari 98.3 3.6E-06 7.8E-11 87.8 12.0 110 202-325 56-171 (206)
458 KOG0617 Ras suppressor protein 98.3 9.6E-08 2.1E-12 94.6 -0.1 67 14-82 29-95 (264)
459 KOG2137 Protein kinase [Signal 98.2 4.1E-07 9E-12 106.7 2.2 98 278-377 105-210 (700)
460 PF13855 LRR_8: Leucine rich r 98.1 1.5E-06 3.3E-11 72.4 2.1 58 19-77 2-60 (61)
461 COG1718 RIO1 Serine/threonine 98.0 5.8E-05 1.2E-09 80.1 13.2 154 148-325 33-216 (268)
462 PF06176 WaaY: Lipopolysacchar 98.0 4.9E-05 1.1E-09 79.7 12.6 142 158-323 29-182 (229)
463 PF13855 LRR_8: Leucine rich r 98.0 2.2E-06 4.8E-11 71.4 1.9 54 1-54 8-61 (61)
464 PF01636 APH: Phosphotransfera 98.0 8.5E-05 1.8E-09 77.1 12.9 151 165-324 2-197 (239)
465 COG0661 AarF Predicted unusual 98.0 3E-05 6.6E-10 91.2 10.6 142 166-327 131-317 (517)
466 TIGR02172 Fb_sc_TIGR02172 Fibr 97.9 0.00015 3.3E-09 76.9 13.7 146 166-323 7-181 (226)
467 PF12799 LRR_4: Leucine Rich r 97.9 9E-06 2E-10 63.6 3.0 37 18-55 1-37 (44)
468 PF12260 PIP49_C: Protein-kina 97.8 4.8E-05 1E-09 78.4 8.4 105 205-325 7-112 (188)
469 KOG0576 Mitogen-activated prot 97.8 4.3E-06 9.3E-11 97.4 -0.3 185 162-377 244-430 (829)
470 KOG0444 Cytoskeletal regulator 97.8 7.3E-06 1.6E-10 94.4 1.3 81 2-84 86-168 (1255)
471 cd05150 APH Aminoglycoside 3'- 97.8 0.00029 6.4E-09 74.9 13.3 75 168-252 6-82 (244)
472 PF10707 YrbL-PhoP_reg: PhoP r 97.7 0.00048 1E-08 71.6 13.3 135 163-323 4-171 (199)
473 PLN02876 acyl-CoA dehydrogenas 97.6 0.00072 1.6E-08 84.8 15.4 83 165-249 43-131 (822)
474 COG2112 Predicted Ser/Thr prot 97.6 0.0003 6.4E-09 71.2 9.4 130 163-324 25-155 (201)
475 cd05155 APH_ChoK_like_1 Unchar 97.5 0.00092 2E-08 70.9 12.5 77 166-251 3-83 (235)
476 KOG0444 Cytoskeletal regulator 97.5 1.8E-05 4E-10 91.2 -0.8 75 1-78 229-303 (1255)
477 KOG0472 Leucine-rich repeat pr 97.5 3.3E-05 7.1E-10 85.6 1.1 79 2-83 420-522 (565)
478 KOG1235 Predicted unusual prot 97.5 0.00059 1.3E-08 80.4 11.1 162 146-327 136-357 (538)
479 PF13095 FTA2: Kinetochore Sim 97.4 0.0023 5E-08 66.5 13.3 130 160-322 37-206 (207)
480 PRK10593 hypothetical protein; 97.3 0.0033 7.2E-08 69.5 14.2 81 163-249 17-100 (297)
481 cd05157 ETNK_euk Ethanolamine 97.3 0.0034 7.3E-08 66.3 13.5 76 165-250 3-80 (235)
482 TIGR02721 ycfN_thiK thiamine k 97.3 0.0015 3.3E-08 70.1 10.9 144 167-323 3-174 (256)
483 cd05153 HomoserineK_II Homoser 97.2 0.0022 4.7E-08 70.3 11.5 154 165-323 19-204 (296)
484 PRK09550 mtnK methylthioribose 97.2 0.0058 1.3E-07 70.2 14.5 77 165-248 31-117 (401)
485 PF14580 LRR_9: Leucine-rich r 97.2 0.00019 4.2E-09 73.0 2.1 75 1-80 26-102 (175)
486 KOG0472 Leucine-rich repeat pr 97.1 8.7E-05 1.9E-09 82.4 -0.4 75 9-85 197-294 (565)
487 PF14580 LRR_9: Leucine-rich r 97.1 0.00034 7.4E-09 71.2 3.3 76 1-79 49-126 (175)
488 KOG4194 Membrane glycoprotein 97.0 8.2E-05 1.8E-09 85.8 -1.9 79 1-79 276-354 (873)
489 KOG4579 Leucine-rich repeat (L 97.0 8E-05 1.7E-09 72.0 -1.9 53 1-55 60-113 (177)
490 KOG4194 Membrane glycoprotein 97.0 0.00017 3.7E-09 83.3 0.1 81 2-82 253-333 (873)
491 KOG0532 Leucine-rich repeat (L 97.0 0.00012 2.7E-09 84.3 -1.6 53 1-55 150-202 (722)
492 PRK05231 homoserine kinase; Pr 96.9 0.013 2.8E-07 64.9 14.3 169 150-323 7-216 (319)
493 TIGR00938 thrB_alt homoserine 96.8 0.021 4.5E-07 63.2 14.6 154 165-323 27-216 (307)
494 PRK15387 E3 ubiquitin-protein 96.8 0.00075 1.6E-08 83.0 3.4 33 19-55 383-415 (788)
495 KOG0618 Serine/threonine phosp 96.8 0.00025 5.4E-09 85.9 -1.0 80 1-82 366-446 (1081)
496 KOG1035 eIF-2alpha kinase GCN2 96.7 0.0027 5.8E-08 79.2 7.3 200 204-465 229-435 (1351)
497 KOG0532 Leucine-rich repeat (L 96.7 0.00025 5.4E-09 81.9 -1.4 77 2-82 83-159 (722)
498 cd05156 ChoK_euk Choline Kinas 96.6 0.021 4.6E-07 62.7 13.0 76 166-251 4-86 (302)
499 KOG1259 Nischarin, modulator o 96.4 0.00086 1.9E-08 72.2 0.4 69 8-79 274-342 (490)
500 KOG4579 Leucine-rich repeat (L 96.4 0.00043 9.3E-09 67.0 -1.7 78 1-81 84-161 (177)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-51 Score=460.62 Aligned_cols=287 Identities=38% Similarity=0.638 Sum_probs=243.0
Q ss_pred CCCccCHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeee
Q 002857 146 DFPYVSYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTA 225 (873)
Q Consensus 146 ~~~~~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~ 225 (873)
....|++++|..||++|+..++||+|+||.||+|... +++.||||++........++|.+|+++|++++|||+|+|+||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 4667999999999999999999999999999999884 448999998875443314669999999999999999999999
Q ss_pred eecccccCCc-eEEEEEeecCCCChhhhcccccccccccCCCC-CCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCC
Q 002857 226 CSRVDYQGND-FKALVYEFMPNGSLEEWIHPITEEDKRHKAPG-NLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKP 303 (873)
Q Consensus 226 c~~~~~~~~~-~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~-~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKp 303 (873)
|.+ .+ +.+||||||++|+|.++|+. ... .++|.+|++||.++|+||+|||+.+.++|||||||+
T Consensus 140 C~e-----~~~~~~LVYEym~nGsL~d~L~~---------~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKs 205 (361)
T KOG1187|consen 140 CLE-----GGEHRLLVYEYMPNGSLEDHLHG---------KKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKS 205 (361)
T ss_pred Eec-----CCceEEEEEEccCCCCHHHHhCC---------CCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCH
Confidence 953 33 69999999999999999975 122 889999999999999999999998888999999999
Q ss_pred CCeeeCCCCCeEEecccccccccccccccccccc-ccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCccc-
Q 002857 304 SNILLNDEMTACVADFGIARFLEATNEQTSSIGV-KGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMF- 381 (873)
Q Consensus 304 sNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~-~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~- 381 (873)
+|||||+++++||+|||+|+..... ....... .||.+|+|||++..+..+.|+|||||||+|+||+||+.+.+...
T Consensus 206 sNILLD~~~~aKlsDFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~ 283 (361)
T KOG1187|consen 206 SNILLDEDFNAKLSDFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRP 283 (361)
T ss_pred HHeeECCCCCEEccCccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCC
Confidence 9999999999999999999765431 1111111 79999999999999999999999999999999999999987643
Q ss_pred ccchhhHHHHhhcCch-hHHHHhhhhhh-hhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHH
Q 002857 382 KDNLNLQNWVQSALPE-RVEEIVDTLFF-KEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIN 459 (873)
Q Consensus 382 ~~~~~l~~~~~~~~~~-~l~elid~~L~-~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~ 459 (873)
.....+..|++..+.. .+.+++|+.+. ..+.. .+.+.++..++.+|++.+|++||+|.
T Consensus 284 ~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~--------------------~~~~~~~~~~a~~C~~~~~~~RP~m~ 343 (361)
T KOG1187|consen 284 RGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPD--------------------EKEVKKLAELALRCLRPDPKERPTMS 343 (361)
T ss_pred cccccHHHHHHHHHHCcchhheeCCCccCCCCCh--------------------HHHHHHHHHHHHHHcCcCCCcCcCHH
Confidence 3445688888777766 79999999886 32210 02356699999999999999999999
Q ss_pred HHHHHHHHHH
Q 002857 460 DVELGLRLIK 469 (873)
Q Consensus 460 EVl~~Le~i~ 469 (873)
||+++|+.+.
T Consensus 344 ~Vv~~L~~~~ 353 (361)
T KOG1187|consen 344 QVVKELEGIL 353 (361)
T ss_pred HHHHHHHhhc
Confidence 9999996653
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.2e-49 Score=497.90 Aligned_cols=417 Identities=23% Similarity=0.360 Sum_probs=296.2
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+++|.+|.++++|++|++|+|++|+|+|.+|..|..|++|+.|+|++|+|+|.+|..+.....+..+.+++|.+.|
T Consensus 506 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 506 LSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred CcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 57899999999999999999999999999999999999999999999999999999999888777888888888888888
Q ss_pred CCCccccC-------------ccccccc------ccccCCCccceeehhhcchhhhhhhhhhhhhhhhhccccCCCCCCc
Q 002857 81 GIPEFQLP-------------TCVSKKT------KQNRSTLPLKLVIAIDCGLLVLTLALSSLFCRLMCMKKRGNPTPSI 141 (873)
Q Consensus 81 ~~p~~~~P-------------~~~~~~~------~~~~s~l~~~ivIai~~g~vv~~l~l~~l~~~~~~~~k~~~~~~~~ 141 (873)
.+|..... .|..... ...+......++++++++++++++++++ ++ +++.+++.......
T Consensus 586 ~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ 663 (968)
T PLN00113 586 SLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAF-GF-VFIRGRNNLELKRV 663 (968)
T ss_pred eCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHH-HH-HHHHhhhccccccc
Confidence 76643110 0110000 0000111112222222222222222111 11 11121111111110
Q ss_pred c-----cC------CCCCccCHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHH
Q 002857 142 S-----ID------LDFPYVSYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEV 210 (873)
Q Consensus 142 ~-----~~------~~~~~~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~i 210 (873)
. .. .....++++++. ..|...++||+|+||.||+|++..++..||||.++.... ....|+++
T Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~ 736 (968)
T PLN00113 664 ENEDGTWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIAD 736 (968)
T ss_pred ccccccccccccccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHH
Confidence 0 00 001223444443 457788999999999999999988899999999864322 22456889
Q ss_pred HHhhhhccceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhh
Q 002857 211 MRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHL 290 (873)
Q Consensus 211 L~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~ 290 (873)
+++++|||||+++|+|. .....++||||+++|+|.++++ .++|.++..|+.|||+||+|||+
T Consensus 737 l~~l~HpnIv~~~~~~~-----~~~~~~lv~Ey~~~g~L~~~l~-------------~l~~~~~~~i~~~ia~~L~yLH~ 798 (968)
T PLN00113 737 MGKLQHPNIVKLIGLCR-----SEKGAYLIHEYIEGKNLSEVLR-------------NLSWERRRKIAIGIAKALRFLHC 798 (968)
T ss_pred HhhCCCCCcceEEEEEE-----cCCCCEEEEeCCCCCcHHHHHh-------------cCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999974 3456899999999999999983 27899999999999999999997
Q ss_pred CCCCCeeeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHH
Q 002857 291 GCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEM 370 (873)
Q Consensus 291 ~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~EL 370 (873)
.++++|+||||||+||+++.++.+++. ||.+...... ....+|..|+|||++.+..++.++|||||||++|||
T Consensus 799 ~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el 871 (968)
T PLN00113 799 RCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIEL 871 (968)
T ss_pred CCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC------CCccccccccCcccccCCCCCcccchhhHHHHHHHH
Confidence 777899999999999999999988876 6655432211 123578999999999999999999999999999999
Q ss_pred HhCCCCCCcccccchhhHHHHhhcCch-hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhc
Q 002857 371 FTGLRPSDDMFKDNLNLQNWVQSALPE-RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSA 449 (873)
Q Consensus 371 lTGk~Pf~~~~~~~~~l~~~~~~~~~~-~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~ 449 (873)
+||+.||+........+..|+...... ....++|+.+..... ...+...++.+++.+||+
T Consensus 872 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~l~~~Cl~ 932 (968)
T PLN00113 872 LTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS-------------------VNQNEIVEVMNLALHCTA 932 (968)
T ss_pred HhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCC-------------------ccHHHHHHHHHHHHhhCc
Confidence 999999976444444555665543332 333444443322110 011224468899999999
Q ss_pred cCcCCCCCHHHHHHHHHHHHH
Q 002857 450 ELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 450 ~dP~eRPTm~EVl~~Le~i~~ 470 (873)
.+|++||||.||+++|+.+..
T Consensus 933 ~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 933 TDPTARPCANDVLKTLESASR 953 (968)
T ss_pred CCchhCcCHHHHHHHHHHhhc
Confidence 999999999999999998754
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-44 Score=399.29 Aligned_cols=259 Identities=32% Similarity=0.468 Sum_probs=207.4
Q ss_pred CcceeecccCceEEEEEEEcCCCcE-EEEEEeeccCCcc--hhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 163 SSENLIGAGNFASVYKGILFEGAPA-VAIKVFNFLHHDA--SKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~g~~-VAVK~l~~~~~~~--~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
...+.||.|+||+||+|.+ .|+. ||||++....... .+.|.+|+.+|.+++|||||+++|+|... ....+|
T Consensus 44 ~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~----~~~~~i 117 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP----PGSLCI 117 (362)
T ss_pred hhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC----CCceEE
Confidence 3446699999999999998 3445 9999997543332 45899999999999999999999998532 226899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCC-eeeccCCCCCeeeCCCC-CeEEe
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPP-IAHCDIKPSNILLNDEM-TACVA 317 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~g-IvHrDLKpsNILLd~~~-~vKLs 317 (873)
|||||++|+|.++|+. .....+++..++.|+.|||+||.||| +.+ |||||||++|||++.++ ++||+
T Consensus 118 VtEy~~~GsL~~~l~~--------~~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~ 186 (362)
T KOG0192|consen 118 VTEYMPGGSLSVLLHK--------KRKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIA 186 (362)
T ss_pred EEEeCCCCcHHHHHhh--------cccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEEC
Confidence 9999999999999964 14678999999999999999999999 777 99999999999999997 99999
Q ss_pred ccccccccccccccccccccccccccCCCcccC--CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM--GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~--~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|||+++...... .......||..|||||++. ...|+.|+|||||||+||||+||+.||....... ..
T Consensus 187 DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~--~~------- 255 (362)
T KOG0192|consen 187 DFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ--VA------- 255 (362)
T ss_pred CCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH--HH-------
Confidence 999998764322 2233367999999999999 5699999999999999999999999998743311 00
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhhhc
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKLLE 474 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l~~ 474 (873)
..++..... |.. ..++...+..++.+||+.||+.||++.+|+.+|+.+......
T Consensus 256 ----~~v~~~~~R---------------p~~------p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 256 ----SAVVVGGLR---------------PPI------PKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred ----HHHHhcCCC---------------CCC------CccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 011100000 000 011455688999999999999999999999999999876654
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-43 Score=374.92 Aligned_cols=259 Identities=26% Similarity=0.309 Sum_probs=210.4
Q ss_pred ccCHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeee
Q 002857 149 YVSYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACS 227 (873)
Q Consensus 149 ~~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~ 227 (873)
.+++.+|+ ..+.||+|..|+||+++++.+++.+|+|++..... ...+++.+|++++++.+||+||+++|.|.
T Consensus 75 ~i~~~dle-------~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~ 147 (364)
T KOG0581|consen 75 GISLSDLE-------RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY 147 (364)
T ss_pred ccCHHHhh-------hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence 35556664 45899999999999999999999999999964433 34578999999999999999999999963
Q ss_pred cccccCCc-eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCe
Q 002857 228 RVDYQGND-FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNI 306 (873)
Q Consensus 228 ~~~~~~~~-~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNI 306 (873)
.+. ...|+||||++|||++++. ..+.+++...-+|+.+|++||.|||+ .++||||||||+||
T Consensus 148 -----~~~~~isI~mEYMDgGSLd~~~k----------~~g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNl 210 (364)
T KOG0581|consen 148 -----SNGEEISICMEYMDGGSLDDILK----------RVGRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNL 210 (364)
T ss_pred -----eCCceEEeehhhcCCCCHHHHHh----------hcCCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHe
Confidence 344 6999999999999999994 34679999999999999999999994 48999999999999
Q ss_pred eeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchh
Q 002857 307 LLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLN 386 (873)
Q Consensus 307 LLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~ 386 (873)
|++..|.+||+|||.++.+... .....+||..|||||.+.+..|+.++||||||++++|+++|+.||.......
T Consensus 211 LvNskGeVKicDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~-- 284 (364)
T KOG0581|consen 211 LVNSKGEVKICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY-- 284 (364)
T ss_pred eeccCCCEEeccccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC--
Confidence 9999999999999999977543 3345679999999999999999999999999999999999999997631111
Q ss_pred hHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 387 LQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 387 l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
....++++......+ |..+.. .+..++..++..||+.||.+||++.|+++.
T Consensus 285 ----------~~~~~Ll~~Iv~~pp------------P~lP~~-----~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 285 ----------LDIFELLCAIVDEPP------------PRLPEG-----EFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred ----------CCHHHHHHHHhcCCC------------CCCCcc-----cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 122333333332221 111110 234468999999999999999999998753
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=388.08 Aligned_cols=254 Identities=29% Similarity=0.468 Sum_probs=207.7
Q ss_pred CcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEe
Q 002857 163 SSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
...+.||+|.||.||.|.+. +...||+|.++... ...+.|.+|+++|++|+|+|||+++|+|.. ++.++||||
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~-----~~piyIVtE 281 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTK-----QEPIYIVTE 281 (468)
T ss_pred HHHHHhcCCccceEEEEEEc-CCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEec-----CCceEEEEE
Confidence 45689999999999999984 44589999998653 334789999999999999999999999842 346899999
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccc
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIA 322 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla 322 (873)
||+.|+|.++|+. .....+...+.+.++.|||+||+||+ ++++|||||.++||||+++..+||+|||+|
T Consensus 282 ~m~~GsLl~yLr~--------~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLA 350 (468)
T KOG0197|consen 282 YMPKGSLLDYLRT--------REGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLA 350 (468)
T ss_pred ecccCcHHHHhhh--------cCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccc
Confidence 9999999999963 35677889999999999999999999 999999999999999999999999999999
Q ss_pred cccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhHHH
Q 002857 323 RFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERVEE 401 (873)
Q Consensus 323 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l~e 401 (873)
+.... +.........-++.|.|||.+..+.++.|||||||||+||||+| |+.||..+...+ +.+
T Consensus 351 r~~~d-~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e--------------v~~ 415 (468)
T KOG0197|consen 351 RLIGD-DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE--------------VLE 415 (468)
T ss_pred cccCC-CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH--------------HHH
Confidence 95433 23333334446789999999999999999999999999999999 999987643221 111
Q ss_pred HhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 402 IVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 402 lid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
.++.-.. .| .+..|+..+.+|+..||+.+|++|||+..+...|+.+..
T Consensus 416 ~le~GyR--------------lp-------~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 416 LLERGYR--------------LP-------RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred HHhccCc--------------CC-------CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 1111100 01 123467789999999999999999999999999887754
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-42 Score=371.06 Aligned_cols=201 Identities=31% Similarity=0.518 Sum_probs=179.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
..+|...+.||+|+||+||+|+++.++..||||.+... .....+.+..|+++|+.++|||||++++++ ..++.
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~-----~~~~~ 83 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCI-----EDDDF 83 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEE-----ecCCe
Confidence 45788889999999999999999999999999998754 444556789999999999999999999996 55678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC-----
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE----- 311 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~----- 311 (873)
.+||||||.||+|.+||+ ..+.+++.....++.|||.||++|| +++||||||||.||||+..
T Consensus 84 i~lVMEyC~gGDLs~yi~----------~~~~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~ 150 (429)
T KOG0595|consen 84 IYLVMEYCNGGDLSDYIR----------RRGRLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDT 150 (429)
T ss_pred EEEEEEeCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCC
Confidence 999999999999999995 3457999999999999999999999 9999999999999999764
Q ss_pred -CCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 312 -MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 312 -~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
-.+||+|||+|+.+... .......|++.|||||+++.++|+.|+|+||+|+|||++++|+.||+..
T Consensus 151 ~~~LKIADFGfAR~L~~~---~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 151 SPVLKIADFGFARFLQPG---SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred CceEEecccchhhhCCch---hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 46899999999988643 3334567999999999999999999999999999999999999999864
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-41 Score=380.06 Aligned_cols=248 Identities=26% Similarity=0.370 Sum_probs=210.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeec---cCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNF---LHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~---~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
..|...++||+|||+.+|++++..+|+.||+|++.. ......+.+.+||+|.+.|+|||||+++++ |++.+.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~-----FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHF-----FEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeE-----eecCCc
Confidence 568999999999999999999999999999999964 234455789999999999999999999999 477889
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.|||.|+|++++|..+++ ..+.+++.++..++.||+.||.||| +.+|+|||||..|+||++++++||
T Consensus 93 VYivLELC~~~sL~el~K----------rrk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKI 159 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLK----------RRKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKI 159 (592)
T ss_pred eEEEEEecCCccHHHHHH----------hcCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEe
Confidence 999999999999999983 5678999999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||+|..+..... ......||+.|+|||++.....+..+||||+|||||-||+|++||+..
T Consensus 160 gDFGLAt~le~~~E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk---------------- 221 (592)
T KOG0575|consen 160 GDFGLATQLEYDGE--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK---------------- 221 (592)
T ss_pred cccceeeeecCccc--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc----------------
Confidence 99999998765432 233468999999999999999999999999999999999999999862
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+.+..+..-..++. .|. ....+..+|+.++|+.||.+|||+.+|+.
T Consensus 222 -~vkety~~Ik~~~Y~----------~P~---------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 222 -TVKETYNKIKLNEYS----------MPS---------HLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred -hHHHHHHHHHhcCcc----------ccc---------ccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 233333333222221 011 01123668999999999999999999875
No 8
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-41 Score=395.11 Aligned_cols=267 Identities=22% Similarity=0.417 Sum_probs=217.7
Q ss_pred CCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 161 GFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
+....+.||+|.||+||+|+... ....||||.++..... ...+|++|+++|..|+|||||+|+|.|. .+
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~-----~~ 561 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR-----EG 561 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc-----cC
Confidence 44556889999999999998643 3457999999876655 6689999999999999999999999994 46
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccC----CCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHK----APGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND 310 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~----~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~ 310 (873)
+.+++|+|||..|||.+||........... ....|+..+.+.||.|||.||.||- ++.+|||||..+|+||.+
T Consensus 562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGE 638 (774)
T ss_pred CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceecc
Confidence 679999999999999999975433222111 1455999999999999999999999 899999999999999999
Q ss_pred CCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHH
Q 002857 311 EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQN 389 (873)
Q Consensus 311 ~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~ 389 (873)
+..+||+|||+++.....+.........-.++|||||.++.+++|++||||||||+|||++| |+.||.+..+++.
T Consensus 639 ~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV---- 714 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV---- 714 (774)
T ss_pred ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH----
Confidence 99999999999997765554443334456889999999999999999999999999999999 9999877543321
Q ss_pred HHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 390 WVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 390 ~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
+..+-+..+. ..++.|+.++..|+..||+.+|++||+++||-..|+...
T Consensus 715 ---------Ie~i~~g~lL----------------------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~ 763 (774)
T KOG1026|consen 715 ---------IECIRAGQLL----------------------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWA 763 (774)
T ss_pred ---------HHHHHcCCcc----------------------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHH
Confidence 1111111111 123457888999999999999999999999999999864
Q ss_pred H
Q 002857 470 K 470 (873)
Q Consensus 470 ~ 470 (873)
.
T Consensus 764 ~ 764 (774)
T KOG1026|consen 764 Q 764 (774)
T ss_pred h
Confidence 3
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-40 Score=359.72 Aligned_cols=253 Identities=23% Similarity=0.301 Sum_probs=199.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc-------chhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD-------ASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~-------~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
.+.|.+.+.||+|+||.|-+|..+.+++.||||+++..... ......+|+++|++|+|||||++++++
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f----- 245 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF----- 245 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee-----
Confidence 34577889999999999999999999999999999743211 223467999999999999999999995
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
...+..|+||||++||+|.+++- ..+.+.+..-..++.|++.|+.||| ++||+||||||+|||+..+
T Consensus 246 ~~~ds~YmVlE~v~GGeLfd~vv----------~nk~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~ 312 (475)
T KOG0615|consen 246 EVPDSSYMVLEYVEGGELFDKVV----------ANKYLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSND 312 (475)
T ss_pred ecCCceEEEEEEecCccHHHHHH----------hccccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccC
Confidence 56677899999999999999983 3566777788999999999999999 9999999999999999755
Q ss_pred ---CCeEEeccccccccccccccccccccccccccCCCcccCCCCC---CcchhhHhHHHHHHHHHhCCCCCCcccccch
Q 002857 312 ---MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET---SSYGDVYSFGILLLEMFTGLRPSDDMFKDNL 385 (873)
Q Consensus 312 ---~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~---s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~ 385 (873)
..+||+|||+|+.... ........||+.|.|||++.+..+ ..+.|+||+|||||-+++|.+||.+...+..
T Consensus 313 ~e~~llKItDFGlAK~~g~---~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s 389 (475)
T KOG0615|consen 313 AEDCLLKITDFGLAKVSGE---GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS 389 (475)
T ss_pred CcceEEEecccchhhcccc---ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc
Confidence 7899999999998753 233445689999999999987643 3478999999999999999999987433321
Q ss_pred hhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 386 NLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 386 ~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+. ..+....+.-. +.. ..+..++..+++.+||..||++|||+.|+++
T Consensus 390 -l~-----------eQI~~G~y~f~---------------p~~----w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 390 -LK-----------EQILKGRYAFG---------------PLQ----WDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred -HH-----------HHHhcCccccc---------------Chh----hhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 11 11111111110 001 1123446789999999999999999999865
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-41 Score=350.29 Aligned_cols=260 Identities=24% Similarity=0.322 Sum_probs=205.2
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccC-CceE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG-NDFK 237 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~-~~~~ 237 (873)
+|.++++||+|.||.||++....++..||.|.++... .........|+.+|++|+|||||+++++- +.+ ...+
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~----f~~~~evl 95 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHS----FIEDNEVL 95 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHh----hhccchhh
Confidence 5788899999999999999999999999999987433 33446789999999999999999999852 233 3448
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCC--eeeccCCCCCeeeCCCCCeE
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPP--IAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~g--IvHrDLKpsNILLd~~~~vK 315 (873)
+|||||+.+|+|.+.++... +..+.+++..+|+++.|+++||.++|... +. |+||||||.||+|+.+|.+|
T Consensus 96 nivmE~c~~GDLsqmIk~~K------~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvK 168 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFK------KQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVK 168 (375)
T ss_pred HHHHHhhcccCHHHHHHHHH------hccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCcee
Confidence 99999999999999996532 34677999999999999999999999311 44 99999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||+++++.... ......+||+.||+||.+....|+.||||||+||++|||..-+.||.+. ++.
T Consensus 169 LGDfGL~r~l~s~~--tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~------- 234 (375)
T KOG0591|consen 169 LGDFGLGRFLSSKT--TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLL------- 234 (375)
T ss_pred eccchhHhHhcchh--HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHH-------
Confidence 99999999886543 3344578999999999999999999999999999999999999999763 111
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
++....-..++. |.+ .+ -....+.+|+..|+..||+.||+...++..++.
T Consensus 235 -----~L~~KI~qgd~~-----------~~p---~~---~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 235 -----SLCKKIEQGDYP-----------PLP---DE---HYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -----HHHHHHHcCCCC-----------CCc---HH---HhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 111111111110 000 01 112357789999999999999997555554443
No 11
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-40 Score=370.68 Aligned_cols=267 Identities=24% Similarity=0.339 Sum_probs=208.3
Q ss_pred HHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeeccc
Q 002857 153 EALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVD 230 (873)
Q Consensus 153 ~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~ 230 (873)
++.....+.+.+...||+|.||+||+|.|.. .||||+++.... +..+.|.+|+.+|++-+|.||+-+.|+|..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~-- 459 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN-- 459 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC--
Confidence 3333334455677899999999999999943 599999985543 345789999999999999999999999743
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND 310 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~ 310 (873)
+. ..||+.+|+|-+|+.+||. ....++..+.+.||.|||+||.||| .++|||||||+.||+|.+
T Consensus 460 ---p~-~AIiTqwCeGsSLY~hlHv---------~etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~ 523 (678)
T KOG0193|consen 460 ---PP-LAIITQWCEGSSLYTHLHV---------QETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHE 523 (678)
T ss_pred ---Cc-eeeeehhccCchhhhhccc---------hhhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEcc
Confidence 33 4999999999999999974 3456888899999999999999999 999999999999999999
Q ss_pred CCCeEEeccccccccccccccccccccccccccCCCcccCCC---CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhh
Q 002857 311 EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH---ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNL 387 (873)
Q Consensus 311 ~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~---~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l 387 (873)
+++|||+|||++.....-..........|.+.|||||+++.+ +|+..+||||||+|+|||+||..||.....+.. +
T Consensus 524 ~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI-i 602 (678)
T KOG0193|consen 524 DLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI-I 602 (678)
T ss_pred CCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe-E
Confidence 999999999999654322222222234588999999998754 789999999999999999999999974222221 1
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
...-+..+..+ .......|.+++.+|+..||..++++||++.+|+.+|+.
T Consensus 603 fmVGrG~l~pd------------------------------~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~ 652 (678)
T KOG0193|consen 603 FMVGRGYLMPD------------------------------LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEE 652 (678)
T ss_pred EEecccccCcc------------------------------chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHH
Confidence 10000000000 011223567789999999999999999999999999988
Q ss_pred HHHh
Q 002857 468 IKKK 471 (873)
Q Consensus 468 i~~~ 471 (873)
+..+
T Consensus 653 l~~~ 656 (678)
T KOG0193|consen 653 LLPS 656 (678)
T ss_pred hhhc
Confidence 7554
No 12
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.1e-39 Score=359.40 Aligned_cols=271 Identities=23% Similarity=0.334 Sum_probs=203.9
Q ss_pred hcCCCcceeecccCceEEEEEEEc-----CCCcEEEEEEeeccCC-cchhHHHHHHHHHHhh-hhccceeeeeeeecccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILF-----EGAPAVAIKVFNFLHH-DASKSFTVECEVMRNI-IHRKIIKVVTACSRVDY 231 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~-----~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~ 231 (873)
.++|++.++||+|+||.||+|.+. .+++.||||+++.... ...+.+.+|+.++.++ +||||++++++|.
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~---- 81 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT---- 81 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec----
Confidence 467899999999999999999753 2356899999874332 2346789999999999 8999999999874
Q ss_pred cCCceEEEEEeecCCCChhhhccccccccc--------------------------------------------------
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDK-------------------------------------------------- 261 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~-------------------------------------------------- 261 (873)
..+...++||||+++|+|.+++........
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 334568999999999999999864211000
Q ss_pred --ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccccccccccccccccc
Q 002857 262 --RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKG 339 (873)
Q Consensus 262 --~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~G 339 (873)
.......+++.+++.++.||++||+||| +.+|+||||||+|||++.++.+||+|||+++...............+
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 238 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARL 238 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCC
Confidence 0001235788899999999999999999 89999999999999999999999999999986543322222223346
Q ss_pred ccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHh
Q 002857 340 TTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVY 418 (873)
Q Consensus 340 t~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~ 418 (873)
+..|+|||++.+..++.++||||||+++|||++ |..||........ +.. .+.+...
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-~~~-----------~~~~~~~----------- 295 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-FCQ-----------RLKDGTR----------- 295 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-HHH-----------HHhcCCC-----------
Confidence 788999999999999999999999999999997 9999875321110 000 0000000
Q ss_pred hhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 419 KYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 419 ~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
...|. .+...+.+|+.+||+.||++|||+.||+++|+.+..
T Consensus 296 --~~~~~---------~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 296 --MRAPE---------NATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred --CCCCC---------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 00000 112357889999999999999999999999998754
No 13
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=380.46 Aligned_cols=270 Identities=26% Similarity=0.437 Sum_probs=218.2
Q ss_pred ccCHHHHHHhhcC---------CCcceeecccCceEEEEEEEcCCC---cEEEEEEeeccCC-cchhHHHHHHHHHHhhh
Q 002857 149 YVSYEALYSATKG---------FSSENLIGAGNFASVYKGILFEGA---PAVAIKVFNFLHH-DASKSFTVECEVMRNII 215 (873)
Q Consensus 149 ~~s~~el~~at~~---------f~~~~~LG~G~fG~VYkg~~~~~g---~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~ 215 (873)
.++|++-..|... ..+.++||.|.||.||+|+++..+ ..||||.++.... ....+|+.|+.||.+++
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 3455554444433 356799999999999999997655 4699999986543 34568999999999999
Q ss_pred hccceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCC
Q 002857 216 HRKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPP 295 (873)
Q Consensus 216 HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~g 295 (873)
||||++|.|+. ......+||+|||++|+|+.||+. ..+++++.+...++++||.||.||- +.+
T Consensus 689 HPNIIrLEGVV-----Tks~PvMIiTEyMENGsLDsFLR~---------~DGqftviQLVgMLrGIAsGMkYLs---dm~ 751 (996)
T KOG0196|consen 689 HPNIIRLEGVV-----TKSKPVMIITEYMENGSLDSFLRQ---------NDGQFTVIQLVGMLRGIASGMKYLS---DMN 751 (996)
T ss_pred CCcEEEEEEEE-----ecCceeEEEhhhhhCCcHHHHHhh---------cCCceEeehHHHHHHHHHHHhHHHh---hcC
Confidence 99999999994 455678999999999999999963 4577999999999999999999999 899
Q ss_pred eeeccCCCCCeeeCCCCCeEEeccccccccccccccc-cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-C
Q 002857 296 IAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQT-SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-G 373 (873)
Q Consensus 296 IvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-G 373 (873)
+|||||.++|||++.+..+|++|||+++.+.++.... .+.+-.-.++|.|||.+...++|.+||||||||||||.++ |
T Consensus 752 YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyG 831 (996)
T KOG0196|consen 752 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 831 (996)
T ss_pred chhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccC
Confidence 9999999999999999999999999999886554222 2222234678999999999999999999999999999888 9
Q ss_pred CCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcC
Q 002857 374 LRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPG 453 (873)
Q Consensus 374 k~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~ 453 (873)
.+||.++.+.+. +.. +.. .+..+|. ..|+..|.+|++.||+.|-.
T Consensus 832 ERPYWdmSNQdV-----------------Ika-Ie~---------gyRLPpP--------mDCP~aL~qLMldCWqkdR~ 876 (996)
T KOG0196|consen 832 ERPYWDMSNQDV-----------------IKA-IEQ---------GYRLPPP--------MDCPAALYQLMLDCWQKDRN 876 (996)
T ss_pred CCcccccchHHH-----------------HHH-HHh---------ccCCCCC--------CCCcHHHHHHHHHHHHHHhh
Confidence 999977544321 111 000 1111111 24778899999999999999
Q ss_pred CCCCHHHHHHHHHHHHH
Q 002857 454 ERMKINDVELGLRLIKK 470 (873)
Q Consensus 454 eRPTm~EVl~~Le~i~~ 470 (873)
+||.+.+|+..|.++..
T Consensus 877 ~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 877 RRPKFAQIVSTLDKLIR 893 (996)
T ss_pred cCCCHHHHHHHHHHHhc
Confidence 99999999999998754
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.4e-39 Score=335.00 Aligned_cols=277 Identities=21% Similarity=0.271 Sum_probs=209.0
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
+.|+...++|+|+||.||+++++++|+.||||+|..... ...+-.++|+++|++++|+|+|.++.+| .....+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF-----rrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF-----RRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH-----Hhccee
Confidence 457778899999999999999999999999999974433 2345688999999999999999999995 556789
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
+||+||++..-|. -|. .....++...+.+++.|+++|+.|+| ++++|||||||+||||+.++.+||+
T Consensus 77 hLVFE~~dhTvL~-eLe---------~~p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLC 143 (396)
T KOG0593|consen 77 HLVFEYCDHTVLH-ELE---------RYPNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLC 143 (396)
T ss_pred EEEeeecchHHHH-HHH---------hccCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEec
Confidence 9999999874444 342 34667888999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCccccc-chhhHHHHhhcC
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKD-NLNLQNWVQSAL 395 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~-~~~l~~~~~~~~ 395 (873)
|||+|+.+... ....+.++.|..|+|||.+.+ -+|....||||+||++.||++|.+.|.+..+- ...........+
T Consensus 144 DFGFAR~L~~p--gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L 221 (396)
T KOG0593|consen 144 DFGFARTLSAP--GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNL 221 (396)
T ss_pred cchhhHhhcCC--cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHccc
Confidence 99999988642 233455678999999999988 58999999999999999999999988764332 111222222223
Q ss_pred chhHHHHhhhh-hhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTL-FFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~-L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.++...++... +... . .+.........+........-+++++..||+.||.+|++-+|++.
T Consensus 222 ~prhq~iF~~N~~F~G----v---~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 222 IPRHQSIFSSNPFFHG----V---RLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CHHHHHHhccCCceee----e---ecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 33333333211 0000 0 000011111122223334456889999999999999999999873
No 15
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-39 Score=343.98 Aligned_cols=247 Identities=24% Similarity=0.347 Sum_probs=206.7
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|++.++||+|+||+||.++.+++++.+|+|++++.. ....+....|..+|.+++||.||+++-. |++.+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys-----FQt~~ 98 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS-----FQTEE 98 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe-----cccCC
Confidence 467999999999999999999999999999999997543 2345678899999999999999999877 58889
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
.+|||+||+.||.|..+|+ ..+.+++..+.-++..|+.||.||| +.+||||||||+|||||++|+++
T Consensus 99 kLylVld~~~GGeLf~hL~----------~eg~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~ 165 (357)
T KOG0598|consen 99 KLYLVLDYLNGGELFYHLQ----------REGRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIK 165 (357)
T ss_pred eEEEEEeccCCccHHHHHH----------hcCCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEE
Confidence 9999999999999999994 4678999999999999999999999 99999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh---
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ--- 392 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~--- 392 (873)
|+|||+++..-... ..+....||+.|||||++.+..|+..+|.||+|+++|||++|.+||....... .......
T Consensus 166 LtDFgL~k~~~~~~--~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~-~~~~I~~~k~ 242 (357)
T KOG0598|consen 166 LTDFGLCKEDLKDG--DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK-MYDKILKGKL 242 (357)
T ss_pred EeccccchhcccCC--CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH-HHHHHhcCcC
Confidence 99999998543332 23334789999999999999999999999999999999999999997632211 1122222
Q ss_pred ----hcCchhHHHHhhhhhhhhhhHHH----HHhhhccCCCC
Q 002857 393 ----SALPERVEEIVDTLFFKEIEEEE----TVYKYKKAPSS 426 (873)
Q Consensus 393 ----~~~~~~l~elid~~L~~~~~~r~----~~~~i~~~p~~ 426 (873)
..+.....+++...+..++..|. ...+++.||..
T Consensus 243 ~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF 284 (357)
T KOG0598|consen 243 PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFF 284 (357)
T ss_pred CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccc
Confidence 22455788999999999888773 34555566653
No 16
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=346.06 Aligned_cols=263 Identities=26% Similarity=0.323 Sum_probs=207.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcc-hhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDA-SKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~-~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.+.|++..+||.|..++||+|+....++.||||+++...... .+.+.+|+..|+.++||||++++..| ..+..+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sF-----vv~~~L 99 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSF-----VVDSEL 99 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEE-----Eeccee
Confidence 457899999999999999999999999999999998655443 48899999999999999999998875 556789
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
|+||.||.+||+.++++. .....+++..+..|++++++||.||| .+|.||||||+.||||+.+|.+||+
T Consensus 100 WvVmpfMa~GS~ldIik~--------~~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLa 168 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKT--------YYPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLA 168 (516)
T ss_pred EEeehhhcCCcHHHHHHH--------HccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEc
Confidence 999999999999999975 34566999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccc-cc-cccccccccCCCcccCC--CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 318 DFGIARFLEATNEQT-SS-IGVKGTTGYIAPEYGMG--HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 318 DFGla~~~~~~~~~~-~~-~~~~Gt~~Y~APE~l~~--~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
|||.+..+....... .. ...+||+.|||||+++. ..|+.|+||||||++..||.+|..||.....-..-+.. ++.
T Consensus 169 dFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t-Lqn 247 (516)
T KOG0582|consen 169 DFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT-LQN 247 (516)
T ss_pred CceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH-hcC
Confidence 999987654433211 11 34579999999999654 47999999999999999999999999874332211111 111
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+-..... +. .+........+.+++..||+.||.+|||+++++.
T Consensus 248 ~pp~~~t~~----~~---------------------~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 248 DPPTLLTSG----LD---------------------KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CCCCccccc----CC---------------------hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 100000000 00 0001111235788999999999999999999875
No 17
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-39 Score=386.31 Aligned_cols=269 Identities=23% Similarity=0.347 Sum_probs=214.7
Q ss_pred CCCcceeecccCceEEEEEEEcCCC-----cEEEEEEeecc-CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGA-----PAVAIKVFNFL-HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g-----~~VAVK~l~~~-~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
+.+..+.||+|.||.||+|....-. ..||||.++.. +.+...+|.+|..+|++++|||||+++|+|.. .
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~-----~ 767 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD-----S 767 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-----C
Confidence 4456789999999999999986432 24899998754 34556789999999999999999999999842 5
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...+|++|||++|+|..||+..+.. ..+...|+..+.+.|+.|||+|+.||+ ++++|||||.++|+||+....+
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~---~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~V 841 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPA---PFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVV 841 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccc---cCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcE
Confidence 6689999999999999999753221 123677999999999999999999999 9999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+|+.+.............-...|||||.+..+.++.|+|||||||+|||++| |..||....+.+
T Consensus 842 KIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~--------- 912 (1025)
T KOG1095|consen 842 KIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE--------- 912 (1025)
T ss_pred EEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH---------
Confidence 9999999995544333222222234678999999999999999999999999999999 999997643221
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhhh
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKLL 473 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l~ 473 (873)
++...+... . .+.+..|++.+++|+..||+.+|++||++..|++.+..+.....
T Consensus 913 --------v~~~~~~gg--------R----------L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 913 --------VLLDVLEGG--------R----------LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred --------HHHHHHhCC--------c----------cCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 111011110 0 01123578889999999999999999999999999998877665
Q ss_pred cC
Q 002857 474 ET 475 (873)
Q Consensus 474 ~~ 475 (873)
..
T Consensus 967 ~~ 968 (1025)
T KOG1095|consen 967 GT 968 (1025)
T ss_pred cC
Confidence 44
No 18
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-38 Score=351.50 Aligned_cols=274 Identities=23% Similarity=0.284 Sum_probs=207.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
+.|+.+++||+|.||.||+|++..+|+.||+|.++... ........+||.||++|+||||++|.+...+. .....
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~~si 193 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LSGSI 193 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CCceE
Confidence 35667789999999999999999999999999987544 44456778999999999999999999986532 24679
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
|||+|||++ +|.-++. ...-.+++.++..++.||+.||.|+| .++|+|||||.+|||||.+|.+||+
T Consensus 194 YlVFeYMdh-DL~GLl~---------~p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKia 260 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLS---------SPGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIA 260 (560)
T ss_pred EEEEecccc-hhhhhhc---------CCCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEec
Confidence 999999987 8988884 34567999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||+|+++....... .+..+-|+.|+|||++.|. .|+.+.|+||.||||.||++|++.|.+..+-. .+...+.-.-.
T Consensus 261 DFGLAr~y~~~~~~~-~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve-Ql~kIfklcGS 338 (560)
T KOG0600|consen 261 DFGLARFYTPSGSAP-YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE-QLHKIFKLCGS 338 (560)
T ss_pred cccceeeccCCCCcc-cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH-HHHHHHHHhCC
Confidence 999999887655443 3455689999999999986 79999999999999999999999987743211 11111110000
Q ss_pred --h-hHH--HHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 397 --E-RVE--EIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 397 --~-~l~--elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
+ .+. ++-.....+ ..++.....++.........++|+..+|..||.+|.|+.+++
T Consensus 339 P~e~~W~~~kLP~~~~~k-----------p~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL 398 (560)
T KOG0600|consen 339 PTEDYWPVSKLPHATIFK-----------PQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSAL 398 (560)
T ss_pred CChhccccccCCcccccC-----------CCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHh
Confidence 0 111 000000000 011112222222233344678899999999999999999764
No 19
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=347.13 Aligned_cols=259 Identities=27% Similarity=0.391 Sum_probs=200.0
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
.++...+.||+|.||.||++...+++...|||..........+.+.+|+.+|++++|||||+++|..... ....+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~---~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSR---ENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccc---cCeeeEe
Confidence 4567789999999999999999888999999998755433367799999999999999999999973221 1136899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC-CCCeEEec
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND-EMTACVAD 318 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~-~~~vKLsD 318 (873)
.|||+++|+|.+++.. ....|++..+..++.||++||+||| +++|||+||||+|||++. ++.+||+|
T Consensus 94 ~mEy~~~GsL~~~~~~---------~g~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaD 161 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKR---------YGGKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLAD 161 (313)
T ss_pred eeeccCCCcHHHHHHH---------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEecc
Confidence 9999999999999953 1226999999999999999999999 999999999999999999 79999999
Q ss_pred cccccccccc-cccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 319 FGIARFLEAT-NEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 319 FGla~~~~~~-~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
||+++..... ..........||+.|||||++..+ ....++|||||||+++||+||+.||... .+. ..++
T Consensus 162 FG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~---~~~~----- 232 (313)
T KOG0198|consen 162 FGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FEE---AEAL----- 232 (313)
T ss_pred CccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cch---HHHH-----
Confidence 9999876541 112223356799999999999964 3345899999999999999999998752 000 0000
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
..+.. .. ..|..+ ........+++.+|++.+|++||||.++++.--
T Consensus 233 ---~~ig~----~~-----------~~P~ip------~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 233 ---LLIGR----ED-----------SLPEIP------DSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred ---HHHhc----cC-----------CCCCCC------cccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 00000 00 001000 011234678999999999999999999876543
No 20
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=7.5e-38 Score=339.57 Aligned_cols=262 Identities=23% Similarity=0.322 Sum_probs=203.1
Q ss_pred CccCHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcc---hhHHHHHHHHHHhhhhccceeeee
Q 002857 148 PYVSYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDA---SKSFTVECEVMRNIIHRKIIKVVT 224 (873)
Q Consensus 148 ~~~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~---~~~f~~Ei~iL~~L~HpNIV~llg 224 (873)
..++.+++ +......||+|++|.||+|.+ +++.||||+++...... .+.|.+|+.+|++++||||++++|
T Consensus 13 ~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 13 KCIESDDI-----DKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred eecCHHHc-----CCCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 44556666 223346899999999999988 68899999997544333 467889999999999999999999
Q ss_pred eeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCC-CCeeeccCCC
Q 002857 225 ACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCK-PPIAHCDIKP 303 (873)
Q Consensus 225 ~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s-~gIvHrDLKp 303 (873)
++.... ......++||||+++|+|.+++.. ...+++...+.++.|++.||.||| . .+++||||||
T Consensus 86 ~~~~~~-~~~~~~~lv~Ey~~~g~L~~~l~~----------~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp 151 (283)
T PHA02988 86 FIIDIV-DDLPRLSLILEYCTRGYLREVLDK----------EKDLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTS 151 (283)
T ss_pred eEEecc-cCCCceEEEEEeCCCCcHHHHHhh----------CCCCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCCh
Confidence 975311 223468999999999999999942 346889999999999999999999 5 4889999999
Q ss_pred CCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCC--CCCCcchhhHhHHHHHHHHHhCCCCCCccc
Q 002857 304 SNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG--HETSSYGDVYSFGILLLEMFTGLRPSDDMF 381 (873)
Q Consensus 304 sNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~--~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~ 381 (873)
+|||+++++.+||+|||+++...... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 152 ~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~ 226 (283)
T PHA02988 152 VSFLVTENYKLKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT 226 (283)
T ss_pred hhEEECCCCcEEEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC
Confidence 99999999999999999998653321 22357899999999876 689999999999999999999999997532
Q ss_pred ccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHH
Q 002857 382 KDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDV 461 (873)
Q Consensus 382 ~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EV 461 (873)
.. ++.+........ ...| ..+...+.+++.+||+.||++|||+.||
T Consensus 227 ~~-----------------~~~~~i~~~~~~--------~~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~el 272 (283)
T PHA02988 227 TK-----------------EIYDLIINKNNS--------LKLP---------LDCPLEIKCIVEACTSHDSIKRPNIKEI 272 (283)
T ss_pred HH-----------------HHHHHHHhcCCC--------CCCC---------CcCcHHHHHHHHHHhcCCcccCcCHHHH
Confidence 11 111111100000 0000 0123458899999999999999999999
Q ss_pred HHHHHHHH
Q 002857 462 ELGLRLIK 469 (873)
Q Consensus 462 l~~Le~i~ 469 (873)
++.|+.+.
T Consensus 273 l~~l~~~~ 280 (283)
T PHA02988 273 LYNLSLYK 280 (283)
T ss_pred HHHHHHHH
Confidence 99999864
No 21
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=353.07 Aligned_cols=254 Identities=26% Similarity=0.398 Sum_probs=218.6
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhh-hhccceeeeeeeeccccc
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~ 232 (873)
...++|...+.||+|+|++|++|+.+.+++.+|||++.+. .....+-+..|-.+|.+| .||.|++|+-. |+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T-----FQ 144 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT-----FQ 144 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE-----ee
Confidence 3456889999999999999999999999999999998632 233345677899999999 89999999987 47
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM 312 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~ 312 (873)
+...+|+|+||+++|+|.++|+ ..+.|++.....++.+|+.||+||| +.|||||||||+|||||.||
T Consensus 145 D~~sLYFvLe~A~nGdll~~i~----------K~Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dm 211 (604)
T KOG0592|consen 145 DEESLYFVLEYAPNGDLLDLIK----------KYGSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDG 211 (604)
T ss_pred cccceEEEEEecCCCcHHHHHH----------HhCcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCC
Confidence 7788999999999999999994 4578999999999999999999999 99999999999999999999
Q ss_pred CeEEecccccccccccccc---------ccc--cccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCccc
Q 002857 313 TACVADFGIARFLEATNEQ---------TSS--IGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMF 381 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~---------~~~--~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~ 381 (873)
++||+|||.|+.+...... ... ...+||..|.+||++.....+..+|||+||||||+|+.|++||....
T Consensus 212 hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N 291 (604)
T KOG0592|consen 212 HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN 291 (604)
T ss_pred cEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc
Confidence 9999999999988654321 111 34789999999999999999999999999999999999999998732
Q ss_pred -----ccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCch
Q 002857 382 -----KDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSST 428 (873)
Q Consensus 382 -----~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~ 428 (873)
...+.+..-+...+++...++++..|..++.+|.+.++++.||-...
T Consensus 292 eyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~ 343 (604)
T KOG0592|consen 292 EYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEG 343 (604)
T ss_pred HHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCccccc
Confidence 23334444455667779999999999999999999999999997654
No 22
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.4e-37 Score=339.43 Aligned_cols=271 Identities=21% Similarity=0.326 Sum_probs=198.7
Q ss_pred cCCCcceeecccCceEEEEEEEcC----------------CCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceee
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE----------------GAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKV 222 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~----------------~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~l 222 (873)
++|.+.++||+|+||.||++.+.. ++..||+|++..... .....|.+|++++.+++|+||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 478889999999999999997632 234799999875432 234579999999999999999999
Q ss_pred eeeeecccccCCceEEEEEeecCCCChhhhcccccccccc---------cCCCCCCchhhhHHHHHHHHHHHHHHhhCCC
Q 002857 223 VTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKR---------HKAPGNLNSLERLNIAIDVASALEYLHLGCK 293 (873)
Q Consensus 223 lg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~---------~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s 293 (873)
++++. ..+..++||||+++|+|.+++......... ......+++..++.|+.||+.||+||| +
T Consensus 85 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~ 156 (304)
T cd05096 85 LGVCV-----DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---S 156 (304)
T ss_pred EEEEe-----cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---H
Confidence 99963 345689999999999999998532111000 112345788899999999999999999 8
Q ss_pred CCeeeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-
Q 002857 294 PPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT- 372 (873)
Q Consensus 294 ~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT- 372 (873)
.+|+||||||+|||++.++.+||+|||+++.+.............++..|+|||++.+..++.++||||||+++|||++
T Consensus 157 ~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~ 236 (304)
T cd05096 157 LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILML 236 (304)
T ss_pred CCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHc
Confidence 9999999999999999999999999999986543322222223345788999999988899999999999999999987
Q ss_pred -CCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccC
Q 002857 373 -GLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAEL 451 (873)
Q Consensus 373 -Gk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~d 451 (873)
+..||....... ....+ ........... ....+ ..++..+.+++.+||+.+
T Consensus 237 ~~~~p~~~~~~~~--~~~~~--------~~~~~~~~~~~---------~~~~~---------~~~~~~~~~li~~cl~~~ 288 (304)
T cd05096 237 CKEQPYGELTDEQ--VIENA--------GEFFRDQGRQV---------YLFRP---------PPCPQGLYELMLQCWSRD 288 (304)
T ss_pred cCCCCCCcCCHHH--HHHHH--------HHHhhhccccc---------cccCC---------CCCCHHHHHHHHHHccCC
Confidence 556765422111 11100 00000000000 00000 012345789999999999
Q ss_pred cCCCCCHHHHHHHHH
Q 002857 452 PGERMKINDVELGLR 466 (873)
Q Consensus 452 P~eRPTm~EVl~~Le 466 (873)
|++||||.||.+.|+
T Consensus 289 p~~RPs~~~i~~~l~ 303 (304)
T cd05096 289 CRERPSFSDIHAFLT 303 (304)
T ss_pred chhCcCHHHHHHHHh
Confidence 999999999998875
No 23
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.4e-37 Score=341.63 Aligned_cols=284 Identities=20% Similarity=0.222 Sum_probs=200.4
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|++.++||+|+||.||+|++..++..||||+++.. .......+.+|++++++++||||+++++++...........+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 478899999999999999999889999999998642 222345688999999999999999999987543323334689
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+. ++|.+++. ....+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|
T Consensus 81 lv~e~~~-~~L~~~l~----------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~D 146 (338)
T cd07859 81 VVFELME-SDLHQVIK----------ANDDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICD 146 (338)
T ss_pred EEEecCC-CCHHHHHH----------hcccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEcc
Confidence 9999995 68998884 2346899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccc-cccccccccccccCCCcccCC--CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 319 FGIARFLEATNE-QTSSIGVKGTTGYIAPEYGMG--HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 319 FGla~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~--~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
||+++....... ........||..|+|||++.+ ..++.++|||||||++|||+||+.||..... ......+....
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~--~~~~~~~~~~~ 224 (338)
T cd07859 147 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLITDLL 224 (338)
T ss_pred CccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHh
Confidence 999985432221 111233468999999999876 5789999999999999999999999965321 11111111111
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.....+......... .+.....+........ ..........+.+++.+||+.+|++|||+.||++
T Consensus 225 ~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 225 GTPSPETISRVRNEK--ARRYLSSMRKKQPVPF-SQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred CCCCHHHHHHhhhhh--HHHHHHhhcccCCCch-HHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 110000000000000 0000011111000000 0000112235778999999999999999999875
No 24
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.3e-37 Score=320.88 Aligned_cols=277 Identities=21% Similarity=0.275 Sum_probs=209.3
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.+|...++||+|.||.||+|++..+|+.||||.++.... .-.....+||+.|+.++|+||+.+++++ ...+..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F-----~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVF-----PHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhc-----cCCCce
Confidence 467788999999999999999999999999999975432 2345789999999999999999999994 567778
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
.||+|||+. +|+..+++ ....++..++..++.++++||+|+| .+.|+||||||.|+|++.+|.+||+
T Consensus 77 ~lVfEfm~t-dLe~vIkd---------~~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiA 143 (318)
T KOG0659|consen 77 SLVFEFMPT-DLEVVIKD---------KNIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIA 143 (318)
T ss_pred EEEEEeccc-cHHHHhcc---------cccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEee
Confidence 999999976 99999964 5677899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||+|+.+...+.... ..+-|..|+|||.+.|. .|+...||||.|||+.||+-|.+-|.+.. +...+...+...-.
T Consensus 144 DFGLAr~f~~p~~~~~--~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~s-DidQL~~If~~LGT 220 (318)
T KOG0659|consen 144 DFGLARFFGSPNRIQT--HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDS-DIDQLSKIFRALGT 220 (318)
T ss_pred cccchhccCCCCcccc--cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCc-hHHHHHHHHHHcCC
Confidence 9999998866543332 23679999999998885 68999999999999999999987776532 22222222222211
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
+...++-+-.-..++ .++...|.... ......+....++++..++..||.+|+|++|++++
T Consensus 221 P~~~~WP~~~~lpdY------~~~~~~P~~~~-~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 221 PTPDQWPEMTSLPDY------VKIQQFPKPPL-NNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCcccCccccccccH------HHHhcCCCCcc-ccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111111111111111 11111122111 11222334457899999999999999999998654
No 25
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.5e-37 Score=339.75 Aligned_cols=260 Identities=23% Similarity=0.404 Sum_probs=203.0
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcE----EEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPA----VAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~----VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.+|++.+.||+|+||.||+|++..++.. ||||+++... ....+.+.+|+.+++.++|+||++++|+|..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~------ 80 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 80 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC------
Confidence 4689999999999999999998666553 8999987443 2345678999999999999999999999742
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++|+||+++|+|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 81 ~~~~~v~e~~~~g~l~~~l~~---------~~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~ 148 (316)
T cd05108 81 STVQLITQLMPFGCLLDYVRE---------HKDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHV 148 (316)
T ss_pred CCceeeeecCCCCCHHHHHHh---------ccccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcE
Confidence 246799999999999999853 2345888899999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+++.+.............++..|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 149 kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~--------- 219 (316)
T cd05108 149 KITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--------- 219 (316)
T ss_pred EEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---------
Confidence 9999999987654332222222335678999999999999999999999999999998 999986531111
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
+..++.... ..+... .+...+.+++.+||+.+|++||++.+|+..|..+....
T Consensus 220 -----~~~~~~~~~--------------~~~~~~-------~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 220 -----ISSILEKGE--------------RLPQPP-------ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred -----HHHHHhCCC--------------CCCCCC-------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 111111000 001000 01234778999999999999999999999998875443
No 26
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=351.26 Aligned_cols=257 Identities=24% Similarity=0.382 Sum_probs=208.7
Q ss_pred ccCHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeec
Q 002857 149 YVSYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSR 228 (873)
Q Consensus 149 ~~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~ 228 (873)
.+.|++|. .++-||.|+.|.||+|++ .++.||||.++. .-..+|+-|++|+|+||+.+.|+|..
T Consensus 120 eiPFe~Is-------ELeWlGSGaQGAVF~Grl--~netVAVKKV~e-------lkETdIKHLRkLkH~NII~FkGVCtq 183 (904)
T KOG4721|consen 120 EIPFEEIS-------ELEWLGSGAQGAVFLGRL--HNETVAVKKVRE-------LKETDIKHLRKLKHPNIITFKGVCTQ 183 (904)
T ss_pred cCCHHHhh-------hhhhhccCcccceeeeec--cCceehhHHHhh-------hhhhhHHHHHhccCcceeeEeeeecC
Confidence 45666663 357899999999999988 567899998752 22458899999999999999999953
Q ss_pred ccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 229 VDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 229 ~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
..-++||||||..|-|..+|+ ....+.....+.+..+||.||.||| .+.|||||||+-||||
T Consensus 184 -----sPcyCIiMEfCa~GqL~~VLk----------a~~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLI 245 (904)
T KOG4721|consen 184 -----SPCYCIIMEFCAQGQLYEVLK----------AGRPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILI 245 (904)
T ss_pred -----CceeEEeeeccccccHHHHHh----------ccCccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEe
Confidence 456899999999999999995 3566778888999999999999999 8999999999999999
Q ss_pred CCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhH
Q 002857 309 NDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 309 d~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~ 388 (873)
..+..+||+|||.++..... .....+.||..|||||++.....++|.|||||||||||||||..||.+....
T Consensus 246 s~~d~VKIsDFGTS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss----- 317 (904)
T KOG4721|consen 246 SYDDVVKISDFGTSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS----- 317 (904)
T ss_pred eccceEEeccccchHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh-----
Confidence 99999999999999876443 2334567999999999999999999999999999999999999999774221
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
..+|..-.. .+..|. ...|++.+.-|+++||+..|..||++.+|+..|+-.
T Consensus 318 AIIwGVGsN----------------------sL~Lpv-------PstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 318 AIIWGVGSN----------------------SLHLPV-------PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred eeEEeccCC----------------------cccccC-------cccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 111111110 011111 235677788899999999999999999999999876
Q ss_pred HHhhhcCC
Q 002857 469 KKKLLETP 476 (873)
Q Consensus 469 ~~~l~~~~ 476 (873)
...+...+
T Consensus 369 ~pell~~t 376 (904)
T KOG4721|consen 369 SPELLSTT 376 (904)
T ss_pred CHHHhccc
Confidence 66665554
No 27
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-38 Score=347.01 Aligned_cols=275 Identities=20% Similarity=0.207 Sum_probs=205.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcc-hhHHHHHHHHHHhhh-hccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDA-SKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~-~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|...++||.|.||.||+|+...++..||||.++..-... .-.-++|++.|++|+ |||||++..++. +.+..
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~----d~~~~ 84 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIR----DNDRI 84 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhh----ccCce
Confidence 467888999999999999999999999999999987443322 123467999999998 999999999863 23338
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
+++|||||+. +|++++++ ....+++..+..|+.||++||+|+| .+|+.||||||+|||+.....+||
T Consensus 85 L~fVfE~Md~-NLYqLmK~---------R~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKi 151 (538)
T KOG0661|consen 85 LYFVFEFMDC-NLYQLMKD---------RNRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKI 151 (538)
T ss_pred EeeeHHhhhh-hHHHHHhh---------cCCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEe
Confidence 9999999966 99999964 3778999999999999999999999 999999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchh--hHHHHhh
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLN--LQNWVQS 393 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~--l~~~~~~ 393 (873)
+|||+||.+.... ..+.++.|..|+|||++.. +-|+.+.||||+|||++|+.+-++.|.+..+-++- +-..+..
T Consensus 152 aDFGLARev~Skp---PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGt 228 (538)
T KOG0661|consen 152 ADFGLAREVRSKP---PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGT 228 (538)
T ss_pred cccccccccccCC---CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCC
Confidence 9999999775433 3455678999999998655 57899999999999999999999999774332211 1111110
Q ss_pred cCchhHH---HHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 394 ALPERVE---EIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 394 ~~~~~l~---elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
-....+. .+...+ .-.+. +. ........+..+..+.++++.+|+++||++|||++|.++.
T Consensus 229 P~~~~~~eg~~La~~m-nf~~P------~~----~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 229 PDKDSWPEGYNLASAM-NFRFP------QV----KPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CccccchhHHHHHHHh-ccCCC------cC----CCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 0000111 111110 00000 00 0011112222345568899999999999999999987653
No 28
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=8e-37 Score=330.26 Aligned_cols=277 Identities=19% Similarity=0.273 Sum_probs=198.1
Q ss_pred cCCCcceeecccCceEEEEEEEcC-CCcEEEEEEeeccCC--cchhHHHHHHHHHHhh---hhccceeeeeeeecccccC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE-GAPAVAIKVFNFLHH--DASKSFTVECEVMRNI---IHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~-~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L---~HpNIV~llg~c~~~~~~~ 233 (873)
++|++.+.||+|+||.||+|++.. +++.||||+++.... .....+.+|+.+++.+ +||||++++++|.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 478899999999999999998754 578899999874332 2234567788887776 6999999999975433344
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
....++||||+. ++|.+++.. .....+++..++.|+.||+.||.||| +.+|+||||||+|||++.++.
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~ 148 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDK--------VPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQ 148 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHh--------CCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCC
Confidence 567899999996 699998853 22345889999999999999999999 899999999999999999999
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+||+|||+++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||....... .+...+..
T Consensus 149 ~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~ 224 (290)
T cd07862 149 IKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDV 224 (290)
T ss_pred EEEccccceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHH
Confidence 999999999865432 12233458999999999988899999999999999999999999997632211 11111100
Q ss_pred c---CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 394 A---LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 394 ~---~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
. .+..+..... +... .....+.. ............+.+++.+||+.||++|||+.|+++
T Consensus 225 ~~~~~~~~~~~~~~--~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 225 IGLPGEEDWPRDVA--LPRQ--------AFHSKSAQ-PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hCCCChhhchhhhc--ccch--------hccCCCCC-CHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0 0000000000 0000 00000000 000111112345778999999999999999999874
No 29
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.1e-37 Score=348.54 Aligned_cols=267 Identities=21% Similarity=0.316 Sum_probs=201.5
Q ss_pred hcCCCcceeecccCceEEEEEEEc-----CCCcEEEEEEeeccC-CcchhHHHHHHHHHHhh-hhccceeeeeeeecccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILF-----EGAPAVAIKVFNFLH-HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDY 231 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~-----~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~ 231 (873)
.++|++.+.||+|+||.||+|++. .++..||||+++... ....+.+.+|+.+|..+ +||||++++++|
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~----- 108 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC----- 108 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee-----
Confidence 346888999999999999999752 346689999987432 23346788999999999 899999999996
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccc---------------------------------------------------
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEED--------------------------------------------------- 260 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~--------------------------------------------------- 260 (873)
...+..++||||+++|+|.++++......
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 44567899999999999999985311000
Q ss_pred --------------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccccc
Q 002857 261 --------------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLE 326 (873)
Q Consensus 261 --------------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~ 326 (873)
........+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 00011235788999999999999999999 8999999999999999999999999999998654
Q ss_pred cccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhHHHHhhh
Q 002857 327 ATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERVEEIVDT 405 (873)
Q Consensus 327 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~ 405 (873)
............++..|+|||++.+..++.++||||||+++|||++ |..||....... .+.. .+..
T Consensus 266 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~------------~~~~ 332 (375)
T cd05104 266 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYK------------MIKE 332 (375)
T ss_pred CcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHH------------HHHh
Confidence 3322222222335678999999999999999999999999999998 888886532211 1111 1110
Q ss_pred hhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 406 LFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 406 ~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
.... ..|. ....++.+|+.+||+.||++||||.||+++|+.
T Consensus 333 ~~~~------------~~~~---------~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 333 GYRM------------LSPE---------CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CccC------------CCCC---------CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 0000 0000 012347899999999999999999999999986
No 30
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.1e-37 Score=348.50 Aligned_cols=268 Identities=22% Similarity=0.346 Sum_probs=201.7
Q ss_pred cCCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccC-CcchhHHHHHHHHHHhh-hhccceeeeeeeeccccc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLH-HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~ 232 (873)
++|++.+.||+|+||.||+|++.. ++..||||+++... ......+.+|+++++.+ +|+||++++++| .
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~-----~ 112 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC-----T 112 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe-----c
Confidence 468889999999999999998643 33579999997443 22345688999999999 899999999986 4
Q ss_pred CCceEEEEEeecCCCChhhhccccccc-----------------------------------------------------
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEE----------------------------------------------------- 259 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~----------------------------------------------------- 259 (873)
.....++||||+++|+|.++++.....
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 456789999999999999998531100
Q ss_pred -------ccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccccccccccc
Q 002857 260 -------DKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQT 332 (873)
Q Consensus 260 -------~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~ 332 (873)
.........+++.++++|+.||+.||+||| +.+|+||||||+|||+++++++||+|||+++.........
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~ 269 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV 269 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee
Confidence 000011235788899999999999999999 8999999999999999999999999999998654332211
Q ss_pred cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhh
Q 002857 333 SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEI 411 (873)
Q Consensus 333 ~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~ 411 (873)
......++..|+|||++.+..++.++|||||||++|||++ |+.||....... . +..++.......
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~------------~~~~~~~~~~~~- 335 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-K------------FYKMVKRGYQMS- 335 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-H------------HHHHHHcccCcc-
Confidence 2222335678999999998899999999999999999997 999986532111 0 111111000000
Q ss_pred hHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 412 EEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 412 ~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
.|. .....+.+++.+||+.+|++|||+.+|+++|+++.
T Consensus 336 -----------~~~---------~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 336 -----------RPD---------FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -----------CCC---------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 000 01234788999999999999999999999999863
No 31
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=5.1e-37 Score=332.48 Aligned_cols=200 Identities=24% Similarity=0.332 Sum_probs=172.3
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.|+..+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.++++++|+||+++++++ ..++..
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEE-----ccCCeE
Confidence 3778899999999999999998899999999986432 22234678899999999999999999985 456679
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++|+|.+++.. .....+++..++.++.|++.||+||| +.+|+||||||+|||+++++.+||+
T Consensus 76 ~lv~e~~~~g~L~~~~~~--------~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~ 144 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYN--------MGNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRIS 144 (285)
T ss_pred EEEEEecCCCcHHHHHHh--------hCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEe
Confidence 999999999999988742 22346889999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|||++....... ......||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 145 Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 203 (285)
T cd05631 145 DLGLAVQIPEGE---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRK 203 (285)
T ss_pred eCCCcEEcCCCC---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCC
Confidence 999998653322 12234689999999999999999999999999999999999999975
No 32
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=347.72 Aligned_cols=250 Identities=23% Similarity=0.308 Sum_probs=205.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
..|....+||+|..|.||.|....+++.||||++....+...+-+.+|+.+|+..+|+|||+++..+ ...+.+++
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sy-----lv~deLWV 347 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSY-----LVGDELWV 347 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHh-----cccceeEE
Confidence 4577778999999999999999999999999999988887778899999999999999999999985 34578999
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
|||||++|+|.+.+. ...+++.++..|++++++||+||| .++|+|||||.+|||++.++.+||+||
T Consensus 348 VMEym~ggsLTDvVt-----------~~~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDF 413 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVT-----------KTRMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDF 413 (550)
T ss_pred EEeecCCCchhhhhh-----------cccccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeee
Confidence 999999999999984 344899999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
|++..+..... .-...+||+.|||||++....|++|.||||||++++||+-|.+||-. +. .+...
T Consensus 414 GFcaqi~~~~~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln---E~-PlrAl--------- 478 (550)
T KOG0578|consen 414 GFCAQISEEQS--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN---EN-PLRAL--------- 478 (550)
T ss_pred eeeeccccccC--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC---CC-hHHHH---------
Confidence 99987765443 22346799999999999999999999999999999999999999853 11 01100
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.++... .. |.... .+.....+.+++.+||+.|+++||++.|+|+
T Consensus 479 -yLIa~n--g~-------------P~lk~----~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 479 -YLIATN--GT-------------PKLKN----PEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred -HHHhhc--CC-------------CCcCC----ccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 000000 00 00000 0111234788999999999999999999975
No 33
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.8e-37 Score=331.67 Aligned_cols=251 Identities=29% Similarity=0.488 Sum_probs=190.9
Q ss_pred cceeecccCceEEEEEEEc----CCCcEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 164 SENLIGAGNFASVYKGILF----EGAPAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 164 ~~~~LG~G~fG~VYkg~~~----~~g~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+.+.||.|.||.||+|.+. ..+..|+||+++..... ..+.|.+|++++++++||||++++|+|. ..+..+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~-----~~~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI-----ENEPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE-----SSSSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccc-----cccccc
Confidence 4688999999999999997 34578999999654332 3678999999999999999999999984 344589
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++|+|.++|+. .....+++.+++.|+.||++||+||| +.+|+|+||+++|||++.++.+||+|
T Consensus 78 lv~e~~~~g~L~~~L~~--------~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~ 146 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKS--------KNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSD 146 (259)
T ss_dssp EEEE--TTEBHHHHHHH--------TCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEES
T ss_pred ccccccccccccccccc--------cccccccccccccccccccccccccc---cccccccccccccccccccccccccc
Confidence 99999999999999964 23567899999999999999999999 78999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||+++...................|+|||.+....++.++||||||+++|||+| |+.||....... +..
T Consensus 147 f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~--~~~-------- 216 (259)
T PF07714_consen 147 FGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE--IIE-------- 216 (259)
T ss_dssp TTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH--HHH--------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccc--------
Confidence 999987632222222233457789999999998889999999999999999999 788886531111 111
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
.+.+.... +.. ..+...+.+++..||+.+|++||||.+|++.|
T Consensus 217 ---~~~~~~~~---------------~~~-------~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 217 ---KLKQGQRL---------------PIP-------DNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---HHHTTEET---------------TSB-------TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---cccccccc---------------eec-------cchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 11000000 000 01133578899999999999999999999876
No 34
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=5.2e-37 Score=330.21 Aligned_cols=265 Identities=24% Similarity=0.462 Sum_probs=203.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCCC-----cEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGA-----PAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g-----~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
++|++.+.||+|+||.||+|.+...+ ..||+|.++.... .....|.+|++++++++|+||+++++++ ..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~ 79 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVC-----TK 79 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEE-----cC
Confidence 46788899999999999999876544 6799999874332 2345689999999999999999999986 34
Q ss_pred CceEEEEEeecCCCChhhhccccccccc------ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCee
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDK------RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNIL 307 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~------~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNIL 307 (873)
....+++|||+++|+|.+++........ .......+++.+++.++.|++.||.||| +.+|+|+||||+||+
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil 156 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCL 156 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEE
Confidence 5678999999999999999954211000 0011256888999999999999999999 899999999999999
Q ss_pred eCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchh
Q 002857 308 LNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLN 386 (873)
Q Consensus 308 Ld~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~ 386 (873)
+++++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~-- 234 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE-- 234 (283)
T ss_pred EcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH--
Confidence 99999999999999986543322222233346788999999998899999999999999999998 999986532111
Q ss_pred hHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 387 LQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 387 l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
+...+.. ... .+ ....++..+.+|+.+||+.+|++||++.||++.|+
T Consensus 235 ------------~~~~i~~---~~~-----------~~-------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05048 235 ------------VIEMIRS---RQL-----------LP-------CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLR 281 (283)
T ss_pred ------------HHHHHHc---CCc-----------CC-------CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHh
Confidence 1111100 000 00 00122446889999999999999999999999997
Q ss_pred H
Q 002857 467 L 467 (873)
Q Consensus 467 ~ 467 (873)
.
T Consensus 282 ~ 282 (283)
T cd05048 282 S 282 (283)
T ss_pred c
Confidence 5
No 35
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-37 Score=344.37 Aligned_cols=251 Identities=23% Similarity=0.308 Sum_probs=201.6
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc----CC-cchhHHHHHHHHHHhhh-hccceeeeeeeeccc
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL----HH-DASKSFTVECEVMRNII-HRKIIKVVTACSRVD 230 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~----~~-~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~ 230 (873)
....+|.+.+.||+|+||+|++|.+..+++.||||+++.. .. ...+.+.+|+.++++++ ||||++++.++
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~---- 89 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVF---- 89 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEE----
Confidence 3456899999999999999999999999999999987643 11 23456778999999998 99999999995
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND 310 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~ 310 (873)
......++||||+.+|+|.+++. ..+.+.+.....++.|++.|++|+| +++|+||||||+|||+|.
T Consensus 90 -~t~~~~~ivmEy~~gGdL~~~i~----------~~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~ 155 (370)
T KOG0583|consen 90 -ATPTKIYIVMEYCSGGDLFDYIV----------NKGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDG 155 (370)
T ss_pred -ecCCeEEEEEEecCCccHHHHHH----------HcCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecC
Confidence 45666999999999999999994 3577888999999999999999999 999999999999999999
Q ss_pred C-CCeEEeccccccccccccccccccccccccccCCCcccCCCC-CC-cchhhHhHHHHHHHHHhCCCCCCcccccchhh
Q 002857 311 E-MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHE-TS-SYGDVYSFGILLLEMFTGLRPSDDMFKDNLNL 387 (873)
Q Consensus 311 ~-~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s-~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l 387 (873)
+ +++||+|||++.... ..........||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||++.. .
T Consensus 156 ~~~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~-----~ 228 (370)
T KOG0583|consen 156 NEGNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN-----V 228 (370)
T ss_pred CCCCEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc-----H
Confidence 9 999999999999774 1222333467999999999999977 75 77999999999999999999998721 1
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
.. +........+. -+.+.. ..++..++.+|+..+|.+|+|+.+|+
T Consensus 229 ~~------------l~~ki~~~~~~---------~p~~~~---------S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 229 PN------------LYRKIRKGEFK---------IPSYLL---------SPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred HH------------HHHHHhcCCcc---------CCCCcC---------CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 11 11111111100 001100 12467899999999999999999998
No 36
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.3e-36 Score=328.04 Aligned_cols=280 Identities=20% Similarity=0.238 Sum_probs=201.4
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++|+||+++++++ ...+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF-----RRRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE-----ecCCEE
Confidence 47899999999999999999998899999999987432 22346788999999999999999999985 456689
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||++++.|..+.. ....+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+
T Consensus 76 ~lv~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~ 142 (287)
T cd07848 76 YLVFEYVEKNMLELLEE----------MPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLC 142 (287)
T ss_pred EEEEecCCCCHHHHHHh----------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEe
Confidence 99999999877765542 2346888999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchh-hHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLN-LQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~-l~~~~~~~~~ 396 (873)
|||+++....... .......|+..|+|||++.+..++.++|||||||++|||++|+.||......... ........++
T Consensus 143 Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 221 (287)
T cd07848 143 DFGFARNLSEGSN-ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLP 221 (287)
T ss_pred eccCccccccccc-ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCC
Confidence 9999987543221 1222346899999999999988999999999999999999999999763221110 0000111111
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
....... ..++............+. .............+.+++.+||+.||++|||++|+++
T Consensus 222 ~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 222 AEQMKLF----YSNPRFHGLRFPAVNHPQ-SLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HHHHHhh----hccchhcccccCcccCcc-cHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1110000 000000000000000000 0000011112346889999999999999999999874
No 37
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=7.6e-37 Score=327.26 Aligned_cols=256 Identities=23% Similarity=0.377 Sum_probs=199.6
Q ss_pred cCCCcceeecccCceEEEEEEEc---CCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILF---EGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~---~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
++|++.+.||+|+||.||+|.+. ..+..||+|+++.... .....+.+|+.++++++||||+++++++ ..++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~ 79 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVI-----TRGN 79 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEE-----ecCC
Confidence 46888999999999999999875 3456899999875432 2345789999999999999999999986 3456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.+++.. ....+++.+++.++.||+.||+||| +.+++||||||+|||++.++.+|
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~---------~~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~ 147 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRK---------HEGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCK 147 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEE
Confidence 78999999999999999842 2346899999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
++|||.+........ .......++..|+|||++.+..++.++||||||+++||+++ |+.||....... ...
T Consensus 148 l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--~~~----- 219 (266)
T cd05064 148 ISGFRRLQEDKSEAI-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--VIK----- 219 (266)
T ss_pred ECCCcccccccccch-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHH-----
Confidence 999998765322111 11112235678999999999999999999999999999875 999986532110 000
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
.+.+.. ..+.. ..++..+.+++..||+.+|++||++.||.+.|+++
T Consensus 220 ------~~~~~~---------------~~~~~-------~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 220 ------AVEDGF---------------RLPAP-------RNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ------HHHCCC---------------CCCCC-------CCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 010000 00000 11234578899999999999999999999998764
No 38
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.3e-36 Score=337.02 Aligned_cols=199 Identities=26% Similarity=0.325 Sum_probs=173.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.++|++.+.||+|+||.||++++..++..||+|++..... .....+.+|+++|++++|+||+++++++ ..++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF-----YSDGEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EECCEE
Confidence 3689999999999999999999998999999999875432 2345799999999999999999999986 345678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCC-CeeeccCCCCCeeeCCCCCeEE
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKP-PIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~-gIvHrDLKpsNILLd~~~~vKL 316 (873)
++||||+++|+|.+++.. ...+++..+..++.|++.||.||| +. +|+||||||+|||++.++.+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl 145 (331)
T cd06649 79 SICMEHMDGGSLDQVLKE----------AKRIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKL 145 (331)
T ss_pred EEEeecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEE
Confidence 999999999999999842 345888999999999999999999 54 6999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|||+++...... .....|+..|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 146 ~Dfg~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 146 CDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ccCcccccccccc----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 9999997653221 2234589999999999999999999999999999999999999965
No 39
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=352.86 Aligned_cols=262 Identities=26% Similarity=0.370 Sum_probs=206.1
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCc---E-EEEEEeec---cCCcchhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAP---A-VAIKVFNF---LHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~---~-VAVK~l~~---~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
.++....++||+|+||.||+|++...+. . ||||..+. ......++|++|+++|++++|||||+++|++.
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~---- 231 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV---- 231 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc----
Confidence 4455566999999999999999876432 3 89999874 33455688999999999999999999999974
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
....++||||+|.||+|.++|+. ....++..+++.++.+.|.||+||| +.++|||||.++|+|++.+
T Consensus 232 -~~~Pl~ivmEl~~gGsL~~~L~k---------~~~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~ 298 (474)
T KOG0194|consen 232 -LEEPLMLVMELCNGGSLDDYLKK---------NKKSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKK 298 (474)
T ss_pred -CCCccEEEEEecCCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCC
Confidence 45678999999999999999953 3346999999999999999999999 9999999999999999999
Q ss_pred CCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHH
Q 002857 312 MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~ 390 (873)
+.+||+|||+++.-... ........-...|+|||.+....++.++|||||||++||+++ |..||.+..... ...+
T Consensus 299 ~~vKISDFGLs~~~~~~--~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~--v~~k 374 (474)
T KOG0194|consen 299 GVVKISDFGLSRAGSQY--VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE--VKAK 374 (474)
T ss_pred CeEEeCccccccCCcce--eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH--HHHH
Confidence 99999999999854311 111111235789999999999999999999999999999999 888987642211 1111
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
+ ....+ .++... ..+..+..++.+||..+|++||||.+|.+.|+.+..
T Consensus 375 I---------------~~~~~----------r~~~~~-------~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 375 I---------------VKNGY----------RMPIPS-------KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK 422 (474)
T ss_pred H---------------HhcCc----------cCCCCC-------CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence 1 00000 001110 123457788899999999999999999999999876
Q ss_pred hhh
Q 002857 471 KLL 473 (873)
Q Consensus 471 ~l~ 473 (873)
...
T Consensus 423 ~~~ 425 (474)
T KOG0194|consen 423 KKE 425 (474)
T ss_pred ccc
Confidence 554
No 40
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-37 Score=335.79 Aligned_cols=279 Identities=29% Similarity=0.405 Sum_probs=208.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHh--hhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRN--IIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~--L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
...+..++||+|+||.||+|.+ +++.||||+|.. +....|++|-+|++. ++|+||++++++-.... ....++
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t-~~~~ey 283 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGT-ADRMEY 283 (534)
T ss_pred CchhhHHHhhcCccceeehhhc--cCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCC-ccccce
Confidence 3446678999999999999988 558999999973 445679999988875 48999999999843322 124478
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCC------CCCeeeccCCCCCeeeCCC
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGC------KPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~------s~gIvHrDLKpsNILLd~~ 311 (873)
+||++|.++|+|.+||. ...++|....+|+..+++||+|||++. +++|+|||||++||||.+|
T Consensus 284 wLVt~fh~kGsL~dyL~-----------~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D 352 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLK-----------ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND 352 (534)
T ss_pred eEEeeeccCCcHHHHHH-----------hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccC
Confidence 99999999999999995 356899999999999999999999764 6789999999999999999
Q ss_pred CCeEEeccccccccccccccccccccccccccCCCcccCCCCC------CcchhhHhHHHHHHHHHhCCCCCCc--cccc
Q 002857 312 MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET------SSYGDVYSFGILLLEMFTGLRPSDD--MFKD 383 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~------s~ksDVwSfGvvL~ELlTGk~Pf~~--~~~~ 383 (873)
+++.|+|||+|..+............+||.+|||||++.+.-. -.+.||||+|.|||||+++..-++. ..+-
T Consensus 353 lTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Y 432 (534)
T KOG3653|consen 353 LTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEY 432 (534)
T ss_pred CcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcc
Confidence 9999999999999887776666667889999999999877522 2458999999999999997655532 1111
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHH-hhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETV-YKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~-~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
...+...+. .++.+.++.+....+. .|+.+ ..+++| ..+..+.+.+..||+.||+.|-|+.=|.
T Consensus 433 qlpfe~evG--~hPt~e~mq~~VV~kK--~RP~~p~~W~~h-----------~~~~~l~et~EeCWDhDaeARLTA~Cv~ 497 (534)
T KOG3653|consen 433 QLPFEAEVG--NHPTLEEMQELVVRKK--QRPKIPDAWRKH-----------AGMAVLCETIEECWDHDAEARLTAGCVE 497 (534)
T ss_pred cCchhHHhc--CCCCHHHHHHHHHhhc--cCCCChhhhhcC-----------ccHHHHHHHHHHHcCCchhhhhhhHHHH
Confidence 112222221 1122222222221111 01110 011112 2245688999999999999999999999
Q ss_pred HHHHHHHH
Q 002857 463 LGLRLIKK 470 (873)
Q Consensus 463 ~~Le~i~~ 470 (873)
+++..+..
T Consensus 498 eR~~~l~~ 505 (534)
T KOG3653|consen 498 ERMAELMM 505 (534)
T ss_pred HHHHHHhc
Confidence 99987643
No 41
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.5e-36 Score=329.37 Aligned_cols=201 Identities=25% Similarity=0.369 Sum_probs=170.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
++|.+.++||.|+||.||+|....+++.||+|+++.... .....+.+|+.++++++|+||+++++++ ......+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~ 79 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII-----HTERCLT 79 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEE-----cCCCeEE
Confidence 578999999999999999999988999999999874332 2345688999999999999999999985 4456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++ +|.+++.. ....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 80 lv~e~~~~-~l~~~l~~---------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~D 146 (288)
T cd07871 80 LVFEYLDS-DLKQYLDN---------CGNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLAD 146 (288)
T ss_pred EEEeCCCc-CHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECc
Confidence 99999975 99988842 2345788899999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
||+++...... .......++..|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 147 fG~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~ 207 (288)
T cd07871 147 FGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGS 207 (288)
T ss_pred CcceeeccCCC--ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99997543222 11223457899999998865 56899999999999999999999999753
No 42
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=9.9e-37 Score=327.69 Aligned_cols=266 Identities=20% Similarity=0.343 Sum_probs=200.7
Q ss_pred hhcCCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
++++|++.+.||+|+||.||+|.+.. .+..||||+++.... ....++.+|+.+++.++|+||+++++++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~----- 78 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV----- 78 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE-----
Confidence 56789999999999999999998642 346799999864322 2345688999999999999999999986
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
..+...++||||+++|+|.+++...............+++..++.++.|++.||+||| +.+++|+||||+||+++++
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 79 SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 155 (277)
T ss_pred cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCC
Confidence 4456789999999999999998542111111111345678889999999999999999 8999999999999999999
Q ss_pred CCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHH
Q 002857 312 MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~ 390 (873)
+.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||...... ....
T Consensus 156 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--~~~~- 232 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--QVLR- 232 (277)
T ss_pred CCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH-
Confidence 9999999999976543222221122345778999999998899999999999999999999 78888652111 0000
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
.+....... .+ ..+...+.+++.+||+.+|++|||+.|++++|+
T Consensus 233 ----------~~~~~~~~~-------------~~---------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 233 ----------FVMEGGLLD-------------KP---------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred ----------HHHcCCcCC-------------CC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 000000000 00 011335788999999999999999999999886
No 43
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4.1e-37 Score=334.43 Aligned_cols=197 Identities=28% Similarity=0.412 Sum_probs=172.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++ .+...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE-----HDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh-----ccCCe
Confidence 47889999999999999999998889999999986432 22345688999999999999999999874 45678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl 142 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRN----------SGRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKL 142 (291)
T ss_pred EEEEEeCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEE
Confidence 9999999999999999842 346888999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|||+++..... .....|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 143 ~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~ 200 (291)
T cd05612 143 TDFGFAKKLRDR-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFD 200 (291)
T ss_pred EecCcchhccCC-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999865321 1234589999999999998999999999999999999999999965
No 44
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.3e-36 Score=338.59 Aligned_cols=270 Identities=21% Similarity=0.317 Sum_probs=203.7
Q ss_pred cCCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccC-CcchhHHHHHHHHHHhh-hhccceeeeeeeeccccc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLH-HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~ 232 (873)
++|++.+.||+|+||.||+|.+.. +++.||+|+++... ....+.+..|+.++.++ +|+||++++++|. .
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~----~ 82 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT----K 82 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe----c
Confidence 478899999999999999997543 34789999987432 22345678899999999 8999999999874 3
Q ss_pred CCceEEEEEeecCCCChhhhccccccccc---------------------------------------------------
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDK--------------------------------------------------- 261 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~--------------------------------------------------- 261 (873)
.+...++||||+++|+|.++|........
T Consensus 83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 45578999999999999999853111000
Q ss_pred ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccccccccccccccccccc
Q 002857 262 RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTT 341 (873)
Q Consensus 262 ~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~ 341 (873)
.......+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+.............++.
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 239 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCc
Confidence 0001236899999999999999999999 8999999999999999999999999999998764332222222344677
Q ss_pred ccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhh
Q 002857 342 GYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKY 420 (873)
Q Consensus 342 ~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i 420 (873)
.|+|||++.+..++.++|||||||++|||++ |..||....... .+ ...+......
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~------------~~~~~~~~~~----------- 295 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EF------------CRRLKEGTRM----------- 295 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HH------------HHHHhccCCC-----------
Confidence 8999999999999999999999999999998 999986522111 00 0000000000
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 421 KKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 421 ~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
..+. .....+.+++.+||+.+|++||++.||++.|+.+.+
T Consensus 296 -~~~~---------~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 296 -RAPE---------YATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred -CCCc---------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0000 112357899999999999999999999999998754
No 45
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.3e-36 Score=322.35 Aligned_cols=256 Identities=25% Similarity=0.427 Sum_probs=202.4
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
.+|++.+.||+|+||.||+|.+...++.||+|++... ....+.+.+|++++++++|+||+++++++. .....++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 79 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPFYI 79 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEc-----CCCCcEE
Confidence 3577889999999999999999888999999998743 233467899999999999999999999863 4556899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++++|.+++.. .....+++..++.++.|++.||+||| +.+++||||||+|||+++++.+||+||
T Consensus 80 v~e~~~~~~L~~~~~~--------~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df 148 (263)
T cd05052 80 ITEFMTYGNLLDYLRE--------CNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADF 148 (263)
T ss_pred EEEeCCCCcHHHHHHh--------CCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCC
Confidence 9999999999999853 23456899999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
|+++....... .......++..|+|||++.+..++.++||||||+++|||++ |..||.....+. .
T Consensus 149 ~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~----------- 214 (263)
T cd05052 149 GLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--V----------- 214 (263)
T ss_pred cccccccccee-eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--H-----------
Confidence 99986543221 11112224668999999999999999999999999999998 999986521110 0
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
...+....... .+ ..+...+.+++.+||+.+|++|||+.+|+++|+.+
T Consensus 215 -~~~~~~~~~~~------------~~---------~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 215 -YELLEKGYRME------------RP---------EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -HHHHHCCCCCC------------CC---------CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 00011000000 00 01123578899999999999999999999999875
No 46
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=346.12 Aligned_cols=260 Identities=24% Similarity=0.387 Sum_probs=213.7
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
...+....++||.|.||.||.|.|++-.-.||||.++... -..++|+.|+.+|+.++|||+|+|+|+|.. +...
T Consensus 265 eRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~-----EpPF 338 (1157)
T KOG4278|consen 265 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTH-----EPPF 338 (1157)
T ss_pred cchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhcc-----CCCe
Confidence 3345566789999999999999999888899999998543 345899999999999999999999999953 4467
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
|||+|||.+|+|.+||+. -....++....+.++.||+.||.||. .+++|||||.++|+|+.++..+||+
T Consensus 339 YIiTEfM~yGNLLdYLRe--------cnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvA 407 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRE--------CNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVA 407 (1157)
T ss_pred EEEEecccCccHHHHHHH--------hchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEee
Confidence 999999999999999965 33445666778999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||+++++..+. ........-.+.|.|||-+....++.|+|||+|||+||||.| |..||.+....
T Consensus 408 DFGLsRlMtgDT-YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS------------- 473 (1157)
T KOG4278|consen 408 DFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------------- 473 (1157)
T ss_pred ccchhhhhcCCc-eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH-------------
Confidence 999999886543 222223345788999999999999999999999999999999 99998763211
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
++.+++..-+. .+..+.|+.++++|++.||+++|.+||++.|+-+.++.+..
T Consensus 474 -qVY~LLEkgyR---------------------M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 474 -QVYGLLEKGYR---------------------MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred -HHHHHHhcccc---------------------ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 12222222111 11234578889999999999999999999999999997643
No 47
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.2e-36 Score=321.21 Aligned_cols=265 Identities=24% Similarity=0.396 Sum_probs=201.6
Q ss_pred CCcceeecccCceEEEEEEEcCCC---cEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccc-cCCc
Q 002857 162 FSSENLIGAGNFASVYKGILFEGA---PAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDY-QGND 235 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g---~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~-~~~~ 235 (873)
|++.+.||+|+||.||+|.+..++ ..||||+++.... .....+.+|+++++.++|+||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567889999999999999886543 7899999874322 234578999999999999999999998754321 2233
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|..++.... .......+++..++.++.|++.||+||| +.+|+||||||+||++++++.+|
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~k 153 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSR----LGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVC 153 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhh----ccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEE
Confidence 5799999999999999985311 1122346899999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||...... .+..
T Consensus 154 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~----- 226 (273)
T cd05035 154 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYD----- 226 (273)
T ss_pred ECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHH-----
Confidence 999999986644332222222335678999999988899999999999999999999 88888653211 0111
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
.+.+.... ..+. .+...+.+++.+||+.||++|||+.||++.|+.+
T Consensus 227 ------~~~~~~~~-------------~~~~---------~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 227 ------YLRHGNRL-------------KQPE---------DCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ------HHHcCCCC-------------CCCc---------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11100000 0000 1233588999999999999999999999999875
No 48
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6.4e-37 Score=338.27 Aligned_cols=242 Identities=20% Similarity=0.263 Sum_probs=192.5
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEe
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
+.||+|+||.||+++...+++.||||+++... ......+.+|+.++++++||||+++++++ ...+..+||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EcCCEEEEEEe
Confidence 46999999999999999999999999987432 23345678899999999999999999885 45678999999
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccc
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIA 322 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla 322 (873)
|+++|+|.+++. ....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 76 ~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a 142 (323)
T cd05571 76 YANGGELFFHLS----------RERVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLC 142 (323)
T ss_pred CCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCC
Confidence 999999999884 2456889999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHH
Q 002857 323 RFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEI 402 (873)
Q Consensus 323 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~el 402 (873)
+...... .......||..|+|||++.+..++.++|||||||++|||+||+.||....... +
T Consensus 143 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-----------------~ 203 (323)
T cd05571 143 KEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-----------------L 203 (323)
T ss_pred cccccCC--CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH-----------------H
Confidence 7532211 12223568999999999999999999999999999999999999996521110 0
Q ss_pred hhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-----CHHHHHH
Q 002857 403 VDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-----KINDVEL 463 (873)
Q Consensus 403 id~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-----Tm~EVl~ 463 (873)
......... ..|. .....+.+++.+||+.||++|| ++.++++
T Consensus 204 ~~~~~~~~~----------~~p~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 204 FELILMEEI----------RFPR---------TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHcCCC----------CCCC---------CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 000000000 0000 0123477899999999999999 7888764
No 49
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.4e-36 Score=324.78 Aligned_cols=258 Identities=22% Similarity=0.333 Sum_probs=199.8
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCc----EEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAP----AVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~----~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
++|++.+.||+|+||.||+|.+..+++ .|++|.+..... ....++..|+.++++++|+||+++++++. +
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~------~ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP------G 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC------C
Confidence 467788999999999999999877665 477777753322 23356788888999999999999999852 3
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++|+||+++|+|.+++.. ....+++..++.|+.||+.||+||| +.+++||||||+|||+++++.+
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~ 148 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQ---------HRDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIV 148 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcE
Confidence 346899999999999999952 2346899999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+++...............++..|+|||++.+..++.++||||||+++|||+| |+.||......
T Consensus 149 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~---------- 218 (279)
T cd05111 149 QIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH---------- 218 (279)
T ss_pred EEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----------
Confidence 9999999986644332222233457789999999998899999999999999999998 99998653211
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
.+.+++..... ...+. .+...+.+++.+||+.+|++|||+.|+++.|..+..
T Consensus 219 ----~~~~~~~~~~~------------~~~~~---------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 219 ----EVPDLLEKGER------------LAQPQ---------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred ----HHHHHHHCCCc------------CCCCC---------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 11111110000 00000 012246778999999999999999999999988754
No 50
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=9.7e-37 Score=337.83 Aligned_cols=254 Identities=19% Similarity=0.286 Sum_probs=200.3
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|++++..++|+||+++++++ ...+.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~-----~~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAF-----QDDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEE-----EcCCE
Confidence 46899999999999999999998889999999997432 23346788999999999999999999985 45678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||+++|+|.+++. ....+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~----------~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL 142 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLN----------NLGVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKL 142 (333)
T ss_pred EEEEEeCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEE
Confidence 999999999999999984 2346888999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||+++.... ......||..|+|||++.+..++.++|||||||++|||++|+.||........ ...+
T Consensus 143 ~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~i----- 210 (333)
T cd05600 143 TDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET--WENL----- 210 (333)
T ss_pred EeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH--HHHH-----
Confidence 99999986533 22334689999999999999999999999999999999999999975321110 0000
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
.... ..+ ..|...... ......+.+++.+||+.+|++||++.||+..
T Consensus 211 ---~~~~-~~~--------------~~~~~~~~~---~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 211 ---KYWK-ETL--------------QRPVYDDPR---FNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ---Hhcc-ccc--------------cCCCCCccc---cccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0000 000 000000000 0112347789999999999999999998764
No 51
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.9e-36 Score=320.84 Aligned_cols=258 Identities=26% Similarity=0.418 Sum_probs=202.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCC---CcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEG---APAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~---g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.++|++.+.||+|+||.||+|.+... ...||||+++.... .....|..|+.++++++|+||+++++++ ...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVV-----TKS 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEE-----ecC
Confidence 35789999999999999999998643 45799999874433 2345789999999999999999999985 445
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
+..++||||+++++|.+++.. ....+++..++.++.|++.||+||| +.+|+|+||||+|||+++++.+
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~ 145 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLRE---------NDGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVC 145 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCE
Confidence 678999999999999999853 2346899999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+|+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||....... ....
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--~~~~--- 220 (266)
T cd05033 146 KVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--VIKA--- 220 (266)
T ss_pred EECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--HHHH---
Confidence 9999999987652222222222335678999999998899999999999999999998 999985421110 1010
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
+.+. . ..+.. ..+...+.+++.+||+.+|++||++.||++.|+++
T Consensus 221 --------~~~~-~--------------~~~~~-------~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 221 --------VEDG-Y--------------RLPPP-------MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --------HHcC-C--------------CCCCC-------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0000 0 00000 01133578999999999999999999999999875
No 52
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.2e-36 Score=320.01 Aligned_cols=262 Identities=22% Similarity=0.329 Sum_probs=204.8
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||+|+...+++.||||.++... ......+.+|+++++.++||||+++++++ ...+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSF-----IEDNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeE-----EECCe
Confidence 57899999999999999999998899999999876422 22335688999999999999999999985 34567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++... ......+++..++.++.||+.||+||| +.+|+|+||||+||+++.++.++|
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l 147 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYF------KKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKL 147 (267)
T ss_pred EEEEEEecCCCcHHHHHHHh------hhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEE
Confidence 89999999999999988431 122345788899999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||++........ ......++..|+|||.+.+..++.++||||||+++|||++|+.||.........+..
T Consensus 148 ~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~------- 218 (267)
T cd08228 148 GDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQ------- 218 (267)
T ss_pred CccccceeccchhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHH-------
Confidence 99999986543221 112345888999999998888999999999999999999999998542111111111
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
.+.. .. .+... .......+.+++.+||+.+|++||++.+|++.|+.++
T Consensus 219 -----~~~~---~~------------~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 219 -----KIEQ---CD------------YPPLP-----TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred -----HHhc---CC------------CCCCC-----hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0000 00 00000 0011335788999999999999999999999999763
No 53
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.1e-36 Score=327.54 Aligned_cols=269 Identities=23% Similarity=0.422 Sum_probs=206.0
Q ss_pred cCCCcceeecccCceEEEEEEEc-----CCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILF-----EGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~-----~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
++|.+.+.||+|+||.||++... .++..+|+|.+........+.+.+|++++++++|+||+++++++ ...
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVC-----VEG 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecC
Confidence 46888999999999999999753 24567999998765555567899999999999999999999996 345
Q ss_pred ceEEEEEeecCCCChhhhcccccccc---cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEED---KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~---~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
...++||||+++++|.+++....... ........+++.+++.++.|++.||+||| +.+|+||||||+|||++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGEN 156 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccC
Confidence 67899999999999999985321100 00122345899999999999999999999 8999999999999999999
Q ss_pred CCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHH
Q 002857 312 MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~ 390 (873)
+.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||+| |..||.......
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~------ 230 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE------ 230 (288)
T ss_pred CcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------
Confidence 9999999999986543322222222335778999999998899999999999999999999 899986532111
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
+++........ ..+. .....+.+++.+||+.+|++|||+.||+..|+.+..
T Consensus 231 -----------~~~~i~~~~~~---------~~~~---------~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 231 -----------VIECITQGRVL---------QRPR---------TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred -----------HHHHHHcCCcC---------CCCC---------CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 01100000000 0000 012347899999999999999999999999998865
Q ss_pred h
Q 002857 471 K 471 (873)
Q Consensus 471 ~ 471 (873)
.
T Consensus 282 ~ 282 (288)
T cd05093 282 A 282 (288)
T ss_pred h
Confidence 3
No 54
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.8e-36 Score=323.64 Aligned_cols=264 Identities=25% Similarity=0.432 Sum_probs=202.9
Q ss_pred cCCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccccC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
++|.+.+.||+|+||.||+|.+.. +++.||||+++..... ..+.+.+|+++|++++|+||+++++++ ..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~ 79 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVC-----TE 79 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEE-----ec
Confidence 468888999999999999998743 3578999998755443 456899999999999999999999996 34
Q ss_pred CceEEEEEeecCCCChhhhccccccccc----ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDK----RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~----~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
....++||||+++++|.+++........ .......+++.+++.++.||+.||+||| +.+|+||||||+||+++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~ 156 (280)
T cd05049 80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVG 156 (280)
T ss_pred CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEc
Confidence 5678999999999999999964211000 0123456889999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhH
Q 002857 310 DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 310 ~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~ 388 (873)
.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||....... ..
T Consensus 157 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~--~~ 234 (280)
T cd05049 157 YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE--VI 234 (280)
T ss_pred CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HH
Confidence 999999999999976533222122223345788999999999999999999999999999999 999986432111 11
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
.. +....+. .+. ......+.+++.+||+.+|++||++.||+++|+
T Consensus 235 ~~-----------~~~~~~~--------------~~~--------~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 235 EC-----------ITQGRLL--------------QRP--------RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HH-----------HHcCCcC--------------CCC--------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 10 0000000 000 011235789999999999999999999999886
No 55
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.1e-36 Score=324.86 Aligned_cols=270 Identities=21% Similarity=0.303 Sum_probs=201.3
Q ss_pred CCcceeecccCceEEEEEEE----cCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 162 FSSENLIGAGNFASVYKGIL----FEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~----~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
|+..+.||+|+||+||++.. ..++..||+|+++.... .....+.+|++++++++|+||+++++++.. .....
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE---QGGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCCce
Confidence 37889999999999988653 34677899999875432 234678899999999999999999998743 23456
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++++|.+++.. ..+++.+++.++.|++.||.||| +.+|+||||||+|||++.++.+||
T Consensus 83 ~~lv~e~~~~~~l~~~~~~-----------~~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l 148 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPK-----------HKLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKI 148 (283)
T ss_pred EEEEecCCCCCCHHHHHHH-----------cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEE
Confidence 8999999999999999842 34899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccc-cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQT-SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||+++......... ......++..|+|||.+.+..++.++||||||+++|||+||..||..................
T Consensus 149 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05080 149 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQM 228 (283)
T ss_pred eecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccccc
Confidence 9999998664322111 111223566799999998888999999999999999999999998653221111111110000
Q ss_pred -chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 396 -PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 396 -~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
...+.++++.... .+.. ..+...+.+++..||+.+|++|||+++|+++|+.+.
T Consensus 229 ~~~~~~~~~~~~~~--------------~~~~-------~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 229 TVVRLIELLERGMR--------------LPCP-------KNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred chhhhhhhhhcCCC--------------CCCC-------CCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 0011111111100 0000 012345889999999999999999999999999864
No 56
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=6.5e-36 Score=326.37 Aligned_cols=202 Identities=25% Similarity=0.413 Sum_probs=170.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.++|++.+.||+|+||.||+|+...+++.||||+++.... .....+.+|+.+++.++|+||+++++++ ......
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII-----HTKETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEE-----ecCCeE
Confidence 4689999999999999999999988899999999874432 2234678899999999999999999985 456679
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+. ++|.+++.. ....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+
T Consensus 79 ~lv~e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~ 145 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDK---------HPGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLA 145 (303)
T ss_pred EEEEECCC-cCHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEC
Confidence 99999995 688877742 2355888899999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
|||+++...... .......++..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 146 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 207 (303)
T cd07869 146 DFGLARAKSVPS--HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGM 207 (303)
T ss_pred CCCcceeccCCC--ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999997543221 11223457899999998865 45788999999999999999999999764
No 57
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.8e-36 Score=323.17 Aligned_cols=274 Identities=24% Similarity=0.350 Sum_probs=203.0
Q ss_pred hcCCCcceeecccCceEEEEEEE----cCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 159 TKGFSSENLIGAGNFASVYKGIL----FEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~----~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.++|++.+.||+|+||.||++.. ..++..||+|.+........+.+.+|++++++++|+||+++++++.. .+.
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~ 79 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGR 79 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc---CCC
Confidence 35788899999999999999974 34678999999876555556789999999999999999999998642 334
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++|+|.+++.. ....+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~---------~~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~ 147 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQK---------HRERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRV 147 (284)
T ss_pred CceEEEEEecCCCCHHHHHHh---------cCcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeE
Confidence 568999999999999999842 2345899999999999999999999 8999999999999999999999
Q ss_pred EEecccccccccccccccc-ccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQTS-SIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~-~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+++.......... .....++..|+|||++.+..++.++||||||+++|||++|..++...... +...+..
T Consensus 148 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~ 224 (284)
T cd05081 148 KIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGN 224 (284)
T ss_pred EECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhccc
Confidence 9999999987643322111 11122445699999999888999999999999999999988775432110 1110000
Q ss_pred cCc--hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 394 ALP--ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 394 ~~~--~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
... .....+.+. +.. ....+.. ..+...+.+++.+||+.+|++||||.||++.|+.+
T Consensus 225 ~~~~~~~~~~~~~~-~~~----------~~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 225 DKQGQMIVYHLIEL-LKN----------NGRLPAP-------PGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred ccccccchHHHHHH-Hhc----------CCcCCCC-------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 000 000111000 000 0000000 01133588999999999999999999999999875
No 58
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.4e-36 Score=339.40 Aligned_cols=194 Identities=29% Similarity=0.345 Sum_probs=167.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
.+|++.+.||+|+||.||++.+..+++.||+|... ...+.+|+++|++++||||+++++++ ..+...++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~-----~~~~~~~l 160 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTF-----TYNKFTCL 160 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEE-----EECCeeEE
Confidence 57999999999999999999999999999999753 24578899999999999999999985 34567899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
|+|++. ++|..++. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||+||
T Consensus 161 v~e~~~-~~L~~~l~----------~~~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DF 226 (391)
T PHA03212 161 ILPRYK-TDLYCYLA----------AKRNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDF 226 (391)
T ss_pred EEecCC-CCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeC
Confidence 999995 68888873 2346889999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|+++...... ........||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 227 G~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 227 GAACFPVDIN-ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred Cccccccccc-ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 9997543221 1122345699999999999999999999999999999999999988643
No 59
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=337.62 Aligned_cols=197 Identities=24% Similarity=0.357 Sum_probs=173.3
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||+|++..+++.||||+++.. .....+.+.+|+.++++++||||+++++++ ..++.
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 92 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSF-----QDENR 92 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----EcCCE
Confidence 5788999999999999999999989999999998743 223346788999999999999999999985 45678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 93 ~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl 159 (329)
T PTZ00263 93 VYFLLEFVVGGELFTHLRK----------AGRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKV 159 (329)
T ss_pred EEEEEcCCCCChHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEE
Confidence 9999999999999999842 346788889999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 160 ~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 217 (329)
T PTZ00263 160 TDFGFAKKVPDR-----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFD 217 (329)
T ss_pred eeccCceEcCCC-----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCC
Confidence 999999865332 1234689999999999999999999999999999999999999965
No 60
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=8.2e-36 Score=318.68 Aligned_cols=265 Identities=22% Similarity=0.400 Sum_probs=199.5
Q ss_pred CCcceeecccCceEEEEEEEcCCCc--EEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccc-cCCce
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAP--AVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY-QGNDF 236 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~--~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~-~~~~~ 236 (873)
|.+.+.||+|+||.||+|++..++. .||+|.++... ....+.+..|+++++.++|+||++++++|..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567899999999999999876664 69999886432 3345678999999999999999999998743211 12235
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. .........+++..++.++.||+.||+||| +.+|+||||||+|||+++++.+||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl 153 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLY----SRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCV 153 (272)
T ss_pred cEEEEEeCCCCcHHHHHHH----hcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEE
Confidence 7899999999999998742 111123455899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |+.||...... .+...+
T Consensus 154 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~---- 227 (272)
T cd05075 154 ADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYL---- 227 (272)
T ss_pred CCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH----
Confidence 99999987643322111122335678999999999999999999999999999999 88888652111 111100
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
.. .. ..+... .+...+.+++.+||+.+|++|||+.+|++.|+.+
T Consensus 228 -------~~----~~-----------~~~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 228 -------RQ----GN-----------RLKQPP-------DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred -------Hc----CC-----------CCCCCC-------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 00 000000 1123478999999999999999999999999864
No 61
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1e-36 Score=334.89 Aligned_cols=192 Identities=27% Similarity=0.371 Sum_probs=167.1
Q ss_pred ecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeec
Q 002857 168 IGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFM 244 (873)
Q Consensus 168 LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~ 244 (873)
||+|+||.||+|++..+++.||+|+++.. .......+..|+.++++++||||+++++++ ...+..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSF-----QSPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEE-----ecCCeEEEEEcCC
Confidence 79999999999999888999999998642 233446788899999999999999999885 4567899999999
Q ss_pred CCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 245 PNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 245 ~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
++|+|.+++.. ...+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 76 ~~g~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~ 142 (312)
T cd05585 76 NGGELFHHLQR----------EGRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKL 142 (312)
T ss_pred CCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECccccc
Confidence 99999999842 346889999999999999999999 89999999999999999999999999999985
Q ss_pred cccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 325 LEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 325 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
..... .......||..|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 143 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~ 195 (312)
T cd05585 143 NMKDD--DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYD 195 (312)
T ss_pred CccCC--CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCC
Confidence 43222 122335689999999999999999999999999999999999999965
No 62
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.5e-36 Score=326.35 Aligned_cols=268 Identities=25% Similarity=0.415 Sum_probs=205.7
Q ss_pred cCCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.+|.+.+.||+|+||.||+|.+.. ++..+++|.++.......+.+.+|++++++++|+||+++++++ ...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVC-----GDG 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEE-----ccC
Confidence 357788999999999999998643 3456999998755555557799999999999999999999996 345
Q ss_pred ceEEEEEeecCCCChhhhccccccc------ccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEE------DKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~------~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
...++||||+++++|.+++...... .........+++..++.++.||+.||+||| +.+|+||||||+|||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~ 156 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLV 156 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEE
Confidence 6789999999999999999542110 000112345899999999999999999999 8999999999999999
Q ss_pred CCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhh
Q 002857 309 NDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNL 387 (873)
Q Consensus 309 d~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l 387 (873)
+.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||+| |+.||....... .
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~ 234 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--V 234 (291)
T ss_pred ccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--H
Confidence 9999999999999976543322222223446788999999999999999999999999999999 999986532111 0
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
.. .+....... .+ ..++..+.+++.+||+.+|++|||+.+|+++|+.
T Consensus 235 ~~-----------~~~~~~~~~-------------~~---------~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~ 281 (291)
T cd05094 235 IE-----------CITQGRVLE-------------RP---------RVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHA 281 (291)
T ss_pred HH-----------HHhCCCCCC-------------CC---------ccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence 00 000000000 00 0113357899999999999999999999999999
Q ss_pred HHH
Q 002857 468 IKK 470 (873)
Q Consensus 468 i~~ 470 (873)
+..
T Consensus 282 ~~~ 284 (291)
T cd05094 282 LGK 284 (291)
T ss_pred HHh
Confidence 854
No 63
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.7e-36 Score=342.82 Aligned_cols=269 Identities=22% Similarity=0.350 Sum_probs=203.4
Q ss_pred hcCCCcceeecccCceEEEEEEEcCC-----CcEEEEEEeeccCC-cchhHHHHHHHHHHhhh-hccceeeeeeeecccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEG-----APAVAIKVFNFLHH-DASKSFTVECEVMRNII-HRKIIKVVTACSRVDY 231 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~-----g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~ 231 (873)
.++|.+.++||+|+||.||+|++... +..||||+++.... ...+.+.+|+++|+++. ||||++++++|
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~----- 110 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC----- 110 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE-----
Confidence 45788999999999999999987432 34699999974332 23457899999999996 99999999996
Q ss_pred cCCceEEEEEeecCCCChhhhccccccccc--------------------------------------------------
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDK-------------------------------------------------- 261 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~-------------------------------------------------- 261 (873)
......+|||||+++|+|.++|+.......
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 445678999999999999999864210000
Q ss_pred ------------------------------------ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCC
Q 002857 262 ------------------------------------RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSN 305 (873)
Q Consensus 262 ------------------------------------~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsN 305 (873)
.......+++.+++.++.||+.||+||| +.+|+||||||+|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~N 267 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARN 267 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHh
Confidence 0001235788899999999999999999 8999999999999
Q ss_pred eeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccc
Q 002857 306 ILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDN 384 (873)
Q Consensus 306 ILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~ 384 (873)
||++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.....+.
T Consensus 268 ill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 268 VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred EEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 9999999999999999986543322222223446788999999999899999999999999999997 999986532111
Q ss_pred hhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 385 LNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 385 ~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
. + ...+.... ..+. ...+...+.+++.+||+.+|++|||+.+|+++
T Consensus 348 ~-~------------~~~~~~~~--------------~~~~-------~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 393 (400)
T cd05105 348 T-F------------YNKIKSGY--------------RMAK-------PDHATQEVYDIMVKCWNSEPEKRPSFLHLSDI 393 (400)
T ss_pred H-H------------HHHHhcCC--------------CCCC-------CccCCHHHHHHHHHHCccCHhHCcCHHHHHHH
Confidence 0 0 00000000 0000 00123457889999999999999999999999
Q ss_pred HHHHH
Q 002857 465 LRLIK 469 (873)
Q Consensus 465 Le~i~ 469 (873)
|+.+.
T Consensus 394 l~~l~ 398 (400)
T cd05105 394 VESLL 398 (400)
T ss_pred HHHHc
Confidence 99763
No 64
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.4e-36 Score=351.99 Aligned_cols=254 Identities=19% Similarity=0.226 Sum_probs=201.3
Q ss_pred CCCcceeecccCceEEEEEEEcCC-CcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEG-APAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~-g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
.|.+.+.||+|+||.||+|....+ +..||+|.+..........+.+|+.+|+.++|||||++++++ ..++..+|
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~-----~~~~~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDF-----KSDDKLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-----EECCEEEE
Confidence 388899999999999999988766 778999987654444456788899999999999999999996 44678999
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++|+|.++|+.. ......+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+||
T Consensus 143 v~E~~~gg~L~~~l~~~------~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DF 213 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQR------LKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDF 213 (478)
T ss_pred EEECCCCCCHHHHHHHH------HhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeC
Confidence 99999999999988531 123456888999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
|+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 214 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~----------------- 276 (478)
T PTZ00267 214 GFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ----------------- 276 (478)
T ss_pred cCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----------------
Confidence 999876443322223345689999999999999999999999999999999999999965211
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+++...+..... ..|. .....+.+++.+||+.+|++||++.+++.
T Consensus 277 ~~~~~~~~~~~~~---------~~~~---------~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 277 REIMQQVLYGKYD---------PFPC---------PVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHHHHhCCCC---------CCCc---------cCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 1111111111100 0000 01234778999999999999999999975
No 65
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=5.4e-36 Score=324.43 Aligned_cols=267 Identities=21% Similarity=0.371 Sum_probs=202.8
Q ss_pred CCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 161 GFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
+|++.+.||+|+||.||+|+... +...+|+|.+..... .....+.+|+.+++.++||||+++++.| ...
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGAC-----SQD 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecC
Confidence 47788999999999999998743 335799998864432 2346789999999999999999999986 345
Q ss_pred ceEEEEEeecCCCChhhhcccccccc--------------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeecc
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEED--------------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCD 300 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~--------------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrD 300 (873)
+..++||||+.+|+|.+++....... ........+++.+++.++.|++.||+||| +.+|+|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~d 152 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRD 152 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhh
Confidence 56899999999999999985321100 00112346889999999999999999999 89999999
Q ss_pred CCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCc
Q 002857 301 IKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDD 379 (873)
Q Consensus 301 LKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~ 379 (873)
|||+|||+++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||+| |..||..
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999986543322222223345778999999988889999999999999999999 9999865
Q ss_pred ccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHH
Q 002857 380 MFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIN 459 (873)
Q Consensus 380 ~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~ 459 (873)
.... .+.+.+....... .+ ..+...+.+++.+||+.+|++||++.
T Consensus 233 ~~~~--------------~~~~~~~~~~~~~------------~~---------~~~~~~~~~~i~~cl~~~P~~Rp~~~ 277 (290)
T cd05045 233 IAPE--------------RLFNLLKTGYRME------------RP---------ENCSEEMYNLMLTCWKQEPDKRPTFA 277 (290)
T ss_pred CCHH--------------HHHHHHhCCCCCC------------CC---------CCCCHHHHHHHHHHccCCcccCCCHH
Confidence 2111 1111111111000 00 01123578899999999999999999
Q ss_pred HHHHHHHHHHH
Q 002857 460 DVELGLRLIKK 470 (873)
Q Consensus 460 EVl~~Le~i~~ 470 (873)
||++.|+++..
T Consensus 278 ~i~~~l~~~~~ 288 (290)
T cd05045 278 DISKELEKMMV 288 (290)
T ss_pred HHHHHHHHHHh
Confidence 99999998753
No 66
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=338.46 Aligned_cols=249 Identities=25% Similarity=0.330 Sum_probs=204.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
..|+..+.||+|.||.||+|.+..+++.||+|++.... ....+++++|+.+|..++++||.+++|.+ ..+..++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsy-----l~g~~Lw 87 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSY-----LKGTKLW 87 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhe-----eecccHH
Confidence 45677799999999999999999999999999998543 34567899999999999999999999985 5567799
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
++|||+.+|++.+.|+ ....+++..+.-|+++++.||.||| ..+.+|||||+.|||+..+|.+||+|
T Consensus 88 iiMey~~gGsv~~lL~----------~~~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~D 154 (467)
T KOG0201|consen 88 IIMEYCGGGSVLDLLK----------SGNILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLAD 154 (467)
T ss_pred HHHHHhcCcchhhhhc----------cCCCCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEe
Confidence 9999999999999994 3445588888999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||.+-.+....... ...+||+.|||||++.+..|+.|+||||||++.+||++|.+|+...... .....+.+..++.
T Consensus 155 fgVa~ql~~~~~rr--~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm--rvlflIpk~~PP~ 230 (467)
T KOG0201|consen 155 FGVAGQLTNTVKRR--KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM--RVLFLIPKSAPPR 230 (467)
T ss_pred cceeeeeechhhcc--ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc--eEEEeccCCCCCc
Confidence 99998775543332 4568999999999999889999999999999999999999999764331 1111111111110
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+. .....+.+++..||+.||+.||+|.++++
T Consensus 231 -----------------------------L~~----~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 231 -----------------------------LDG----DFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred -----------------------------ccc----ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 000 11234778999999999999999999885
No 67
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=7e-36 Score=315.97 Aligned_cols=249 Identities=24% Similarity=0.371 Sum_probs=193.7
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeec
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFM 244 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~ 244 (873)
+.||+|+||.||+|++..+++.||+|.+.... ......+.+|++++++++|+||++++++| ......++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC-----TQKQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----cCCCCeEEEEeec
Confidence 36999999999999998889999999876432 23346799999999999999999999996 3456789999999
Q ss_pred CCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 245 PNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 245 ~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
++++|.+++.. ....+++.+++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++..
T Consensus 76 ~~~~L~~~~~~---------~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 143 (252)
T cd05084 76 QGGDFLTFLRT---------EGPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSRE 143 (252)
T ss_pred cCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcc
Confidence 99999999842 2345889999999999999999999 89999999999999999999999999999875
Q ss_pred cccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhHHHHh
Q 002857 325 LEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERVEEIV 403 (873)
Q Consensus 325 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l~eli 403 (873)
...............+..|+|||.+.+..++.++||||||+++|||++ |..||....... ....+
T Consensus 144 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--------------~~~~~ 209 (252)
T cd05084 144 EEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--------------TREAI 209 (252)
T ss_pred cccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--------------HHHHH
Confidence 432211111111123567999999999999999999999999999998 888886421110 11111
Q ss_pred hhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 404 DTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 404 d~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
...... +.. ..+...+.+++.+||+.+|++|||+.+|+++|+
T Consensus 210 ~~~~~~--------------~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 210 EQGVRL--------------PCP-------ELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HcCCCC--------------CCc-------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 110000 000 011335788999999999999999999999886
No 68
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.5e-36 Score=320.72 Aligned_cols=257 Identities=28% Similarity=0.452 Sum_probs=205.1
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
...+|++.++||.|+||.||+|.+.. +..+|+|++..........+..|+.+++.++|+||+++++++ ......
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~ 77 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVC-----SVGEPV 77 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeE-----ecCCCe
Confidence 34578889999999999999999866 889999999866555567899999999999999999999986 345678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++++|.++++. .....+++.+++.++.||+.||+||| +.+|+|+||||+||++++++.+||+
T Consensus 78 ~lv~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~ 146 (261)
T cd05148 78 YIITELMEKGSLLAFLRS--------PEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVA 146 (261)
T ss_pred EEEEeecccCCHHHHHhc--------CCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEc
Confidence 999999999999999953 23456899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||++........ ......++..|+|||++.+..++.++||||||+++|+|++ |+.||....... ..
T Consensus 147 d~g~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~--~~-------- 214 (261)
T cd05148 147 DFGLARLIKEDVY--LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE--VY-------- 214 (261)
T ss_pred cccchhhcCCccc--cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH--HH--------
Confidence 9999986543221 1112346778999999988899999999999999999998 899986532110 00
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
..+... . ..+.. ..+...+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 215 ---~~~~~~-~--------------~~~~~-------~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 215 ---DQITAG-Y--------------RMPCP-------AKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ---HHHHhC-C--------------cCCCC-------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 000000 0 00000 01133578999999999999999999999999853
No 69
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.3e-36 Score=353.54 Aligned_cols=267 Identities=24% Similarity=0.260 Sum_probs=207.0
Q ss_pred HHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 154 ALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 154 el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
+.....++|.+.+.||+|+||+||+|++..+++.||||++.... ......+.+|+.++..++|+||+++...+.....
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 34455679999999999999999999998899999999987442 2334568889999999999999998877543211
Q ss_pred ---cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 232 ---QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 232 ---~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
......++||||+++|+|.++|+. .......+++..+..|+.|++.||.||| +.+|+||||||+|||+
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~------~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl 176 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKS------RAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILL 176 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHH------hhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEE
Confidence 111246899999999999999853 1123456889999999999999999999 8999999999999999
Q ss_pred CCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhH
Q 002857 309 NDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 309 d~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~ 388 (873)
+.++.+||+|||+++.+.............||..|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 177 ~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~------ 250 (496)
T PTZ00283 177 CSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM------ 250 (496)
T ss_pred eCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH------
Confidence 99999999999999876443222223345699999999999999999999999999999999999999965211
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
.++++..+..... +.. ......+.+++.+||+.+|++||++.+++..
T Consensus 251 -----------~~~~~~~~~~~~~-----------~~~-------~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 251 -----------EEVMHKTLAGRYD-----------PLP-------PSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred -----------HHHHHHHhcCCCC-----------CCC-------CCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111111111100 000 0112357789999999999999999999864
No 70
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=8.8e-36 Score=316.30 Aligned_cols=251 Identities=27% Similarity=0.380 Sum_probs=195.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
++|++.+.||+|+||.||++.+. ++..+|+|.+.... .....+.+|++++++++||||+++++++ ......++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVC-----TQQKPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEE-----ccCCCEEE
Confidence 45788899999999999999874 45689999876332 2346789999999999999999999986 34567899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++|+|.++++. ....+++..++.++.|++.||+||| +.+|+|+||||+||++++++.+||+||
T Consensus 77 v~e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~ 144 (256)
T cd05114 77 VTEFMENGCLLNYLRQ---------RQGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDF 144 (256)
T ss_pred EEEcCCCCcHHHHHHh---------CccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCC
Confidence 9999999999999852 2235889999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
|+++....... .......++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....
T Consensus 145 g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--~~~~~-------- 213 (256)
T cd05114 145 GMTRYVLDDEY-TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--EVVEM-------- 213 (256)
T ss_pred CCccccCCCce-eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH--------
Confidence 99986532221 11122335678999999988889999999999999999999 89998652111 11111
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
+....... .|. .....+.+++.+||+.+|++||++.||++.|
T Consensus 214 ---i~~~~~~~-------------~~~---------~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 214 ---ISRGFRLY-------------RPK---------LASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ---HHCCCCCC-------------CCC---------CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 10000000 000 0122478999999999999999999999887
No 71
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=8.1e-37 Score=339.19 Aligned_cols=247 Identities=27% Similarity=0.406 Sum_probs=207.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|.+.+.||+|.||.||||+.+.+.+.||+|.+.+... .+.+.+.+|++|+++++|||||.++.+ |+...+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~es-----fEt~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLES-----FETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHh-----hcccceE
Confidence 578889999999999999999999999999999875443 345679999999999999999999998 4778899
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++|+||+.| +|..+|. ....+++..+..|+.|++.||.||| +.+|+|||+||.|||++..+++|++
T Consensus 77 ~vVte~a~g-~L~~il~----------~d~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~Klc 142 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILE----------QDGKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLC 142 (808)
T ss_pred EEEehhhhh-hHHHHHH----------hccCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeec
Confidence 999999977 9999994 4678999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
|||+|+.+... ....+.+.||+.|||||+..+..|+..+|.||+|||+||+++|++||...
T Consensus 143 dFg~Ar~m~~~--t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~----------------- 203 (808)
T KOG0597|consen 143 DFGLARAMSTN--TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR----------------- 203 (808)
T ss_pred hhhhhhhcccC--ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----------------
Confidence 99999976542 33445678999999999999999999999999999999999999999541
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+.+++...+.... +|+. .....+..++...|..||.+|-|-.+++.
T Consensus 204 si~~Lv~~I~~d~v------------~~p~-------~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 204 SITQLVKSILKDPV------------KPPS-------TASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HHHHHHHHHhcCCC------------CCcc-------cccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 23333333332221 1111 11224778889999999999999998875
No 72
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=6.1e-36 Score=318.06 Aligned_cols=254 Identities=24% Similarity=0.417 Sum_probs=199.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
++|++.++||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++++++|+||+++++.+ ......++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 78 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV-----TKEEPIYI 78 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEE-----cCCCCcEE
Confidence 5688899999999999999986 456789999876433 2346899999999999999999999885 44567899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++|+|.++++. .....+++.+++.++.|++.||+||| +.+++|+||||+||+++.++.+||+||
T Consensus 79 v~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df 147 (261)
T cd05072 79 ITEYMAKGSLLDFLKS--------DEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADF 147 (261)
T ss_pred EEecCCCCcHHHHHHH--------hcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCC
Confidence 9999999999999853 23456888899999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
|+++....... .......++..|+|||++.+..++.++||||||+++|||+| |+.||....... ....+...
T Consensus 148 g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~~---- 220 (261)
T cd05072 148 GLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSALQRG---- 220 (261)
T ss_pred ccceecCCCce-eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHHHHcC----
Confidence 99986543221 11122335678999999988889999999999999999998 999986521111 11110000
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
. ..+.. ......+.+++.+||+.+|++||++.+|.+.|+.
T Consensus 221 --------~--------------~~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 221 --------Y--------------RMPRM-------ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred --------C--------------CCCCC-------CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0 00000 0112357889999999999999999999999975
No 73
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.5e-36 Score=333.72 Aligned_cols=242 Identities=21% Similarity=0.279 Sum_probs=191.8
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEe
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
+.||+|+||.||++....++..||+|+++.. .......+.+|++++++++||||+++++++ ...+..+||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCEEEEEEe
Confidence 4699999999999999889999999998743 223345678899999999999999999985 45668999999
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccc
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIA 322 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla 322 (873)
|+++|+|..++. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 76 ~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 142 (323)
T cd05595 76 YANGGELFFHLS----------RERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC 142 (323)
T ss_pred CCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHh
Confidence 999999998884 2346889999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHH
Q 002857 323 RFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEI 402 (873)
Q Consensus 323 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~el 402 (873)
+...... .......||..|+|||++.+..++.++|||||||++|||++|+.||....... +
T Consensus 143 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-----------------~ 203 (323)
T cd05595 143 KEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-----------------L 203 (323)
T ss_pred ccccCCC--CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH-----------------H
Confidence 7532211 11223468999999999999999999999999999999999999996521110 0
Q ss_pred hhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-----CHHHHHH
Q 002857 403 VDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-----KINDVEL 463 (873)
Q Consensus 403 id~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-----Tm~EVl~ 463 (873)
......... ..|. .....+.+++.+||+.||++|| ++.++++
T Consensus 204 ~~~~~~~~~----------~~p~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 204 FELILMEEI----------RFPR---------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHhcCCC----------CCCC---------CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 000000000 0000 0123467899999999999998 7888765
No 74
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.1e-35 Score=316.33 Aligned_cols=255 Identities=29% Similarity=0.430 Sum_probs=200.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.+.||+|++|.||+|.+. +++.||+|.++... ...+.+.+|+.++++++|+||+++++++ ...+..+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 77 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVC-----TLEEPIY 77 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEE-----ecCCCee
Confidence 457889999999999999999874 55789999987443 2346789999999999999999999985 3456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. .....+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|
T Consensus 78 lv~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d 146 (261)
T cd05068 78 IVTELMKYGSLLEYLQG--------GAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVAD 146 (261)
T ss_pred eeeecccCCcHHHHHhc--------cCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECC
Confidence 99999999999999853 22346899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||+++....... ........+..|+|||++.+..++.++||||||+++|||+| |+.||.......
T Consensus 147 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~------------- 212 (261)
T cd05068 147 FGLARVIKEDIY-EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE------------- 212 (261)
T ss_pred cceEEEccCCcc-cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------------
Confidence 999987642211 11112223468999999999999999999999999999999 999986531110
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
+...++.... .+.. ..+...+.+++.+||+.+|++||++.+|++.|+.
T Consensus 213 -~~~~~~~~~~--------------~~~~-------~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 213 -VLQQVDQGYR--------------MPCP-------PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -HHHHHHcCCC--------------CCCC-------CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0000110000 0000 0113357889999999999999999999999975
No 75
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.7e-36 Score=321.10 Aligned_cols=260 Identities=23% Similarity=0.387 Sum_probs=202.1
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCc----EEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAP----AVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~----~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
.++|+..++||+|+||.||+|++..+++ .||+|+++.... .....+.+|+.+++.++|+||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~------ 79 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICL------ 79 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEc------
Confidence 3578889999999999999999876665 489999874332 23467889999999999999999999873
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
....+++|||+++|+|.++++. ....+++..++.++.||+.||+||| +.+|+||||||+|||+++++.
T Consensus 80 ~~~~~l~~~~~~~g~l~~~l~~---------~~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~ 147 (279)
T cd05109 80 TSTVQLVTQLMPYGCLLDYVRE---------NKDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNH 147 (279)
T ss_pred CCCcEEEEEcCCCCCHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCc
Confidence 2346799999999999999853 2346899999999999999999999 899999999999999999999
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~ 392 (873)
+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||...... .+.
T Consensus 148 ~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~---- 221 (279)
T cd05109 148 VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EIP---- 221 (279)
T ss_pred EEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHH----
Confidence 99999999987643322211222235678999999998899999999999999999998 89998652211 111
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHh
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKK 471 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~ 471 (873)
..+..... .+.. ..+...+.+++.+||+.||++||++.+++..|+.+...
T Consensus 222 --------~~~~~~~~--------------~~~~-------~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 222 --------DLLEKGER--------------LPQP-------PICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred --------HHHHCCCc--------------CCCC-------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 11111000 0000 01123477899999999999999999999999877543
No 76
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=316.55 Aligned_cols=245 Identities=23% Similarity=0.328 Sum_probs=206.4
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|+..+.||.|+||.|.+++.+.++..+|+|+++... ....+...+|..+|+.+.||.++++.+.+ .+.+.
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~-----~d~~~ 118 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF-----KDNSN 118 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee-----ccCCe
Confidence 46778899999999999999999999999999997543 23345678899999999999999999985 56788
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||++||.|..+|+ ..+.+++....-++.+|+.||+||| +.+|++|||||+|||||.+|.+||
T Consensus 119 lymvmeyv~GGElFS~Lr----------k~~rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKi 185 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLR----------KSGRFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKI 185 (355)
T ss_pred EEEEEeccCCccHHHHHH----------hcCCCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEE
Confidence 999999999999999994 4677999999999999999999999 999999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHH-----
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWV----- 391 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~----- 391 (873)
+|||+|+.... .+....||+.|+|||+++...+..++|.|||||++|||+.|..||..... ...+.+.+
T Consensus 186 tDFGFAK~v~~-----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-~~iY~KI~~~~v~ 259 (355)
T KOG0616|consen 186 TDFGFAKRVSG-----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-IQIYEKILEGKVK 259 (355)
T ss_pred EeccceEEecC-----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-HHHHHHHHhCccc
Confidence 99999997643 24457899999999999999999999999999999999999999976433 22223332
Q ss_pred -hhcCchhHHHHhhhhhhhhhhHHHH-----HhhhccCCCCch
Q 002857 392 -QSALPERVEEIVDTLFFKEIEEEET-----VYKYKKAPSSST 428 (873)
Q Consensus 392 -~~~~~~~l~elid~~L~~~~~~r~~-----~~~i~~~p~~~~ 428 (873)
...+...+.+++...+..+...|.. ..+++.|||...
T Consensus 260 fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~ 302 (355)
T KOG0616|consen 260 FPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKG 302 (355)
T ss_pred CCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccc
Confidence 2334557889999888888777632 345778888653
No 77
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2e-35 Score=314.05 Aligned_cols=262 Identities=23% Similarity=0.328 Sum_probs=206.0
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||+|....+++.||+|.++.. .....+.+.+|++++++++|+||+++++++ ...+.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~-----~~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASF-----IENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeee-----ecCCe
Confidence 5799999999999999999999888999999988632 222346789999999999999999999986 34567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++... ......+++.+++.++.+++.||.||| +.+|+||||+|+||+++.++.++|
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l 147 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHF------KKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKL 147 (267)
T ss_pred EEEEEecCCCCCHHHHHHHh------cccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEE
Confidence 89999999999999998531 123455889999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||+++....... ......++..|+|||++.+..++.++||||||+++|+|++|+.||...... ..
T Consensus 148 ~d~~~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~-------- 214 (267)
T cd08224 148 GDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LY-------- 214 (267)
T ss_pred eccceeeeccCCCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc---HH--------
Confidence 99999886543221 122345788999999999888999999999999999999999998542111 11
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
++.+...... .+... . ......+.+++.+||+.+|++|||+.+|+++|+.+.
T Consensus 215 ----~~~~~~~~~~------------~~~~~--~---~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 215 ----SLCKKIEKCD------------YPPLP--A---DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ----HHHhhhhcCC------------CCCCC--h---hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1111100000 00000 0 011235778999999999999999999999999763
No 78
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-37 Score=340.39 Aligned_cols=264 Identities=21% Similarity=0.319 Sum_probs=211.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcch-hHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDAS-KSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~-~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+...+.++||+|.||.|.++.. .++..||||+++....... .+|..|+++|.+++|||||+|+|+|. .++.++
T Consensus 538 s~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~-----~DePic 611 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCV-----QDDPLC 611 (807)
T ss_pred hheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeee-----cCCchH
Confidence 3456678999999999999987 4578999999986655544 78999999999999999999999995 355689
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+|+|||++|+|.+||.. .....+.....+.|+.|||.||+||. +.++|||||.++|+|+|.++++||+|
T Consensus 612 mI~EYmEnGDLnqFl~a--------heapt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiad 680 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSA--------HELPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIAD 680 (807)
T ss_pred HHHHHHhcCcHHHHHHh--------ccCcccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecC
Confidence 99999999999999964 12222566677889999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh--CCCCCCcccccchhhHHHHhhcCc
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT--GLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT--Gk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
||+++-+............+-+++|||||.+..++++.+||||+|||++||+++ ...||....+++. .
T Consensus 681 fgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v--v-------- 750 (807)
T KOG1094|consen 681 FGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV--V-------- 750 (807)
T ss_pred cccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH--H--------
Confidence 999997766665555555667899999999999999999999999999999876 7888876543321 1
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
++..++++..-. +.++.. +.-|+..+.+++++||..+.++||++++|...|+..
T Consensus 751 en~~~~~~~~~~---------~~~l~~---------P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 751 ENAGEFFRDQGR---------QVVLSR---------PPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HhhhhhcCCCCc---------ceeccC---------CCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 111122111100 011111 123566799999999999999999999999988763
No 79
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.2e-35 Score=330.01 Aligned_cols=200 Identities=27% Similarity=0.351 Sum_probs=173.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.++|++.++||+|+||.||++.+..++..+|+|++..... .....+.+|++++++++|+||++++++| ..++..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF-----YSDGEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEE-----EECCEE
Confidence 4689999999999999999999988999999999875422 2345789999999999999999999996 345689
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ ..+|+|+||||+|||++.++.+||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~ 146 (333)
T cd06650 79 SICMEHMDGGSLDQVLKK----------AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLC 146 (333)
T ss_pred EEEEecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEe
Confidence 999999999999999842 3457888999999999999999993 2479999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|||++..+.... .....|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 147 Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 147 DFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred eCCcchhhhhhc----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 999997553221 1234589999999999998999999999999999999999999975
No 80
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.4e-36 Score=333.62 Aligned_cols=243 Identities=20% Similarity=0.276 Sum_probs=193.0
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEe
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
+.||+|+||.||++....+++.||||++... .......+.+|+.+++.++||||+++++++ ...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEEEe
Confidence 4699999999999999889999999999743 223446788899999999999999999885 45678999999
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccc
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIA 322 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla 322 (873)
|+++|+|.+++. ....+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 76 y~~~g~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~ 142 (328)
T cd05593 76 YVNGGELFFHLS----------RERVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLC 142 (328)
T ss_pred CCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCC
Confidence 999999998884 2356899999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHH
Q 002857 323 RFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEI 402 (873)
Q Consensus 323 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~el 402 (873)
+...... .......||..|+|||++.+..++.++|||||||++|||++|+.||....... +
T Consensus 143 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~-----------------~ 203 (328)
T cd05593 143 KEGITDA--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-----------------L 203 (328)
T ss_pred ccCCCcc--cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH-----------------H
Confidence 7532211 12223468999999999999999999999999999999999999996521110 0
Q ss_pred hhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-----CHHHHHHH
Q 002857 403 VDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-----KINDVELG 464 (873)
Q Consensus 403 id~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-----Tm~EVl~~ 464 (873)
....+.... ..|. .....+.+++.+||+.||++|| ++.|+++.
T Consensus 204 ~~~~~~~~~----------~~p~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 204 FELILMEDI----------KFPR---------TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHhccCCc----------cCCC---------CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 000000000 0000 0122467899999999999997 88888753
No 81
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=7.5e-36 Score=321.19 Aligned_cols=263 Identities=24% Similarity=0.345 Sum_probs=200.0
Q ss_pred hhcCCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
.+++|.+.+.||+|+||.||+|.+.. .+..||+|.+..... .....|.+|+.++++++|+||+++++++.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~---- 79 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSF---- 79 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEc----
Confidence 35678999999999999999999876 667899998864332 23456899999999999999999999863
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
.....++||||+++++|.+++..... .......+++..++.++.||+.||+||| +.+++|+||||+|||++.+
T Consensus 80 -~~~~~~lv~e~~~g~~L~~~i~~~~~---~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~ 152 (277)
T cd05036 80 -ERLPRFILLELMAGGDLKSFLRENRP---RPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCK 152 (277)
T ss_pred -cCCCcEEEEecCCCCCHHHHHHHhCC---CCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEecc
Confidence 34567999999999999999854211 1112346899999999999999999999 8899999999999999865
Q ss_pred C---CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhh
Q 002857 312 M---TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNL 387 (873)
Q Consensus 312 ~---~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l 387 (873)
+ .+||+|||+++................+..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--- 229 (277)
T cd05036 153 GPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--- 229 (277)
T ss_pred CCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---
Confidence 4 699999999986633221111112234568999999999999999999999999999997 999986532111
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
+.+.+....... .|. .+...+.+++.+||+.+|++||++.+|++.|+
T Consensus 230 -----------~~~~~~~~~~~~------------~~~---------~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 230 -----------VMEFVTGGGRLD------------PPK---------GCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred -----------HHHHHHcCCcCC------------CCC---------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 111111000000 000 11235788999999999999999999999885
No 82
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.8e-35 Score=319.07 Aligned_cols=279 Identities=20% Similarity=0.230 Sum_probs=197.9
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhh---hhccceeeeeeeecccccCCc
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNI---IHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L---~HpNIV~llg~c~~~~~~~~~ 235 (873)
+|++.+.||+|+||.||+|.+..+++.||+|.++.... .....+.+|+++++++ +|+||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 47889999999999999999999999999999874322 2234567788887766 699999999987543333456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+.+ +|.+++.. .....+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+|
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~k 148 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDK--------VPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVK 148 (288)
T ss_pred eEEEEEccccc-CHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEE
Confidence 68999999974 89888843 22345899999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||+++...... ......+|..|+|||++.+..++.++|||||||++|||++|+.||....... .+........
T Consensus 149 l~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~ 224 (288)
T cd07863 149 LADFGLARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIG 224 (288)
T ss_pred ECccCccccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhC
Confidence 99999998654322 1223457899999999998899999999999999999999999986532211 1111110000
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
........ ..+.. . ......... ........+....+.+++.+||+.||++|||+.|++.
T Consensus 225 ~~~~~~~~-~~~~~--~----~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 225 LPPEDDWP-RDVTL--P----RGAFSPRGP-RPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CCChhhCc-ccccc--c----ccccCCCCC-CchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000 00000 0 000000000 0001111122345789999999999999999999864
No 83
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=7.5e-36 Score=319.83 Aligned_cols=265 Identities=21% Similarity=0.346 Sum_probs=202.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCC-----CcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeeccccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEG-----APAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~-----g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~ 232 (873)
.++|++.+.||+|+||.||+|.+... +..||+|.+..... .....+.+|+.+++.++|+||+++++++ .
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~ 79 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVV-----S 79 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEE-----c
Confidence 35788899999999999999988643 37899999864332 3345788999999999999999999996 3
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM 312 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~ 312 (873)
.....++||||+++|+|.+++...............+++..++.++.||+.||.||| +.+|+|+||||+|||++.++
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~ 156 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDL 156 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCC
Confidence 456789999999999999999642211111112345788999999999999999999 89999999999999999999
Q ss_pred CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHH
Q 002857 313 TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWV 391 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~ 391 (873)
.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||+| |+.||....... ....
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~- 233 (277)
T cd05032 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE--VLKF- 233 (277)
T ss_pred CEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH--HHHH-
Confidence 999999999986543322222223346789999999988889999999999999999998 999986422111 1110
Q ss_pred hhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 392 QSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 392 ~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
+.+.... ..|. .+...+.+++.+||+.+|++|||+.+|++.|+
T Consensus 234 ----------~~~~~~~-------------~~~~---------~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 234 ----------VIDGGHL-------------DLPE---------NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred ----------HhcCCCC-------------CCCC---------CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 0000000 0000 01335789999999999999999999999886
No 84
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.9e-35 Score=312.33 Aligned_cols=250 Identities=22% Similarity=0.295 Sum_probs=200.5
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|+..+.||+|++|.||+|++..+++.|++|.+... .....+.+.+|++++++++|+||+++++++ ......+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF-----LDKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeee-----ccCCEEE
Confidence 477889999999999999999889999999998643 233456789999999999999999999985 4456899
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.++++. .....+++..++.++.|++.||.||| +.+|+|+||||+||+++.++.++|+|
T Consensus 76 lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~d 144 (256)
T cd08529 76 IVMEYAENGDLHKLLKM--------QRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGD 144 (256)
T ss_pred EEEEeCCCCcHHHHHHH--------hcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcc
Confidence 99999999999999853 22456889999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||+++.+..... ......++..|+|||++.+..++.++||||||+++|||++|+.||...... ...
T Consensus 145 f~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~---------- 210 (256)
T cd08529 145 LGVAKLLSDNTN--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--ALI---------- 210 (256)
T ss_pred cccceeccCccc--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHH----------
Confidence 999986643321 122345788999999999999999999999999999999999999653211 000
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+.. ... +... ......+.+++.+||+.+|++||++.+|++
T Consensus 211 -~~~~~----~~~------------~~~~------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 211 -LKIIR----GVF------------PPVS------QMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred -HHHHc----CCC------------CCCc------cccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 00000 000 0000 011235789999999999999999999875
No 85
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.2e-35 Score=319.47 Aligned_cols=269 Identities=21% Similarity=0.372 Sum_probs=207.1
Q ss_pred hcCCCcceeecccCceEEEEEEEcC----CCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFE----GAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~----~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
.++|++.+.||+|+||.||+|.+.. .+..||+|++.... ......+.+|+.++++++|+||+++++++. ..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~----~~ 80 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCI----ED 80 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe----cC
Confidence 4678899999999999999999865 25789999986432 233467889999999999999999999874 33
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
+...++++||+++|+|.+++...... .......+++.+++.++.||+.||+||| +.+++|+||||+||++++++.
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~--~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~ 155 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLG--EANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQ 155 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhcccc--ccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCc
Confidence 56789999999999999998541111 0112256899999999999999999999 899999999999999999999
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~ 392 (873)
+||+|||+++.+.............++..|+|||++.+..++.++||||||+++||+++ |+.||.... ...+..++.
T Consensus 156 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~ 233 (280)
T cd05043 156 VKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID--PFEMAAYLK 233 (280)
T ss_pred EEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC--HHHHHHHHH
Confidence 99999999986543322222222346778999999988889999999999999999999 999986521 111111111
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHh
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKK 471 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~ 471 (873)
.. .. .+.. ..+...+.+++.+||+.+|++|||+.+|++.|+.+.++
T Consensus 234 ~~------------~~--------------~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 234 DG------------YR--------------LAQP-------INCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred cC------------CC--------------CCCC-------CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 00 00 0000 01133578899999999999999999999999988653
No 86
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.7e-36 Score=320.99 Aligned_cols=265 Identities=24% Similarity=0.412 Sum_probs=199.6
Q ss_pred cCCCcceeecccCceEEEEEEEc----CCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILF----EGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~----~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
++|++.+.||+|+||.||+|.+. ..+..||+|.+..... .....+.+|++++++++|+||+++++++ ..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~ 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVV-----TQE 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEE-----ecC
Confidence 45788899999999999999853 3557899999874332 2336788999999999999999999985 445
Q ss_pred ceEEEEEeecCCCChhhhccccccc-------ccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCee
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEE-------DKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNIL 307 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~-------~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNIL 307 (873)
...++||||+++++|.+++...... .........+++.+++.++.|++.||+||| +.+|+||||||+|||
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nil 156 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNIL 156 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEE
Confidence 6789999999999999998421100 000111345888999999999999999999 899999999999999
Q ss_pred eCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchh
Q 002857 308 LNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLN 386 (873)
Q Consensus 308 Ld~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~ 386 (873)
+++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||...... .
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~--~ 234 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ--E 234 (283)
T ss_pred EcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--H
Confidence 99999999999999986543322222223345778999999988889999999999999999999 98898642110 1
Q ss_pred hHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 387 LQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 387 l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
+.+.++.... ...+. .+...+.+++.+||+.+|++||++.+|+++|.
T Consensus 235 ------------~~~~~~~~~~------------~~~~~---------~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 235 ------------VIEMVRKRQL------------LPCSE---------DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred ------------HHHHHHcCCc------------CCCCC---------CCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 1111110000 00000 11235778999999999999999999999886
Q ss_pred H
Q 002857 467 L 467 (873)
Q Consensus 467 ~ 467 (873)
.
T Consensus 282 ~ 282 (283)
T cd05090 282 S 282 (283)
T ss_pred c
Confidence 4
No 87
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=7.8e-36 Score=333.66 Aligned_cols=248 Identities=26% Similarity=0.369 Sum_probs=189.2
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
+|+..++||+|+||.||+|++..+++.||||++..... .....+.+|++++++++|+||+++++++ ..++..++
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~l 149 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNGEIQV 149 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCCeEEE
Confidence 44567899999999999999988899999999864432 2346789999999999999999999985 45667899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++|+|.+.. .+++..+..|+.||+.||+||| +.+|+||||||+|||++.++.+||+||
T Consensus 150 v~e~~~~~~L~~~~--------------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~Df 212 (353)
T PLN00034 150 LLEFMDGGSLEGTH--------------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADF 212 (353)
T ss_pred EEecCCCCcccccc--------------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccc
Confidence 99999999987543 2345678889999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCC-----CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-----HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+++.+..... ......||..|+|||++.. ...+.++|||||||++|||++|+.||....... +.
T Consensus 213 G~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~------ 282 (353)
T PLN00034 213 GVSRILAQTMD--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD--WA------ 282 (353)
T ss_pred ccceecccccc--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc--HH------
Confidence 99986543221 1223468999999998743 234568999999999999999999997321111 00
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
.+........ .+... ..+...+.+++.+||+.||++|||+.||++.
T Consensus 283 ------~~~~~~~~~~------------~~~~~------~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 283 ------SLMCAICMSQ------------PPEAP------ATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ------HHHHHHhccC------------CCCCC------CccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000000 00000 0112357889999999999999999998763
No 88
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=323.51 Aligned_cols=291 Identities=22% Similarity=0.266 Sum_probs=214.7
Q ss_pred HHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEee--ccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 154 ALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFN--FLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 154 el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~--~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
+...+...|...+.||+|+||.|..|.+..+++.||||.+. .......++..+|+++|+.++|+||+.++.+......
T Consensus 16 ~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~ 95 (359)
T KOG0660|consen 16 ELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR 95 (359)
T ss_pred eEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence 34445667777899999999999999999999999999986 4455566888999999999999999999999765333
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
..-...|+|+|+| .-+|.+.|+ ....|+......++.||++||.|+| +.+|+||||||+|+|++.+
T Consensus 96 ~~f~DvYiV~elM-etDL~~iik----------~~~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~ 161 (359)
T KOG0660|consen 96 DKFNDVYLVFELM-ETDLHQIIK----------SQQDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNAD 161 (359)
T ss_pred cccceeEEehhHH-hhHHHHHHH----------cCccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccC
Confidence 4556789999999 559999994 3455999999999999999999999 9999999999999999999
Q ss_pred CCeEEeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHH
Q 002857 312 MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~ 390 (873)
...||+|||+|+...........+..+.|..|+|||++.. ..|+...||||.|||+.||++|+..|.+.. ..+....
T Consensus 162 c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d--~v~Ql~l 239 (359)
T KOG0660|consen 162 CDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD--YVHQLQL 239 (359)
T ss_pred CCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc--hHHHHHH
Confidence 9999999999998765433333456778999999998654 589999999999999999999999997632 2222222
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+...+...-.+.+... ..+. .+..+......|..+ ............++|+.+||..||.+|+|++|.++
T Consensus 240 I~~~lGtP~~e~l~~i-~s~~-ar~yi~slp~~p~~~-f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 240 ILELLGTPSEEDLQKI-RSEK-ARPYIKSLPQIPKQP-FSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHhcCCCCHHHHHHh-ccHH-HHHHHHhCCCCCCCC-HHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 2222222111111111 1000 011111111111111 11122233345779999999999999999998754
No 89
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8.5e-36 Score=318.03 Aligned_cols=255 Identities=22% Similarity=0.287 Sum_probs=198.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
++|++.+.||+|+||.||+|++..+++.||+|++..........+.+|+.++++++|+||+++++++ ..++..++
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~-----~~~~~~~i 83 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSY-----LSREKLWI 83 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEE-----EeCCEEEE
Confidence 4789999999999999999999889999999999755545556788999999999999999999986 34567899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++++|.++++. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+||
T Consensus 84 v~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~df 150 (267)
T cd06646 84 CMEYCGGGSLQDIYHV----------TGPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADF 150 (267)
T ss_pred EEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcC
Confidence 9999999999998842 345789999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccC---CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGM---GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|+++....... ......++..|+|||.+. ...++.++||||||+++|||++|+.||........ ...+
T Consensus 151 g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~~~------ 221 (267)
T cd06646 151 GVAAKITATIA--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLM------ 221 (267)
T ss_pred ccceeeccccc--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-heee------
Confidence 99986532211 112345888999999874 34578899999999999999999999854211100 0000
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
....+. .+..... ......+.+++.+||+.+|++|||+++|++.|
T Consensus 222 ------~~~~~~--------------~~~~~~~----~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 222 ------SKSNFQ--------------PPKLKDK----TKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ------ecCCCC--------------CCCCccc----cccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 000000 0000000 00123578899999999999999999998643
No 90
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-36 Score=327.16 Aligned_cols=260 Identities=22% Similarity=0.308 Sum_probs=200.2
Q ss_pred HHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--------------CcchhHHHHHHHHHHhhhhcccee
Q 002857 156 YSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--------------HDASKSFTVECEVMRNIIHRKIIK 221 (873)
Q Consensus 156 ~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--------------~~~~~~f~~Ei~iL~~L~HpNIV~ 221 (873)
....++|++.+.||+|.||.|-+|+...+++.||||++.+.. ....+...+||.+|++++|+|||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 345678999999999999999999999999999999985221 112257899999999999999999
Q ss_pred eeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccC
Q 002857 222 VVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDI 301 (873)
Q Consensus 222 llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDL 301 (873)
|+.+..+ ...+..|||+|||..|.+...= .....+++.+.+++++++..||+||| .++||||||
T Consensus 173 LiEvLDD---P~s~~~YlVley~s~G~v~w~p----------~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDI 236 (576)
T KOG0585|consen 173 LIEVLDD---PESDKLYLVLEYCSKGEVKWCP----------PDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDI 236 (576)
T ss_pred EEEeecC---cccCceEEEEEeccCCccccCC----------CCcccccHHHHHHHHHHHHHHHHHHH---hcCeecccc
Confidence 9998532 4566799999999988876532 12223999999999999999999999 999999999
Q ss_pred CCCCeeeCCCCCeEEeccccccccccccc---cccccccccccccCCCcccCCCC----CCcchhhHhHHHHHHHHHhCC
Q 002857 302 KPSNILLNDEMTACVADFGIARFLEATNE---QTSSIGVKGTTGYIAPEYGMGHE----TSSYGDVYSFGILLLEMFTGL 374 (873)
Q Consensus 302 KpsNILLd~~~~vKLsDFGla~~~~~~~~---~~~~~~~~Gt~~Y~APE~l~~~~----~s~ksDVwSfGvvL~ELlTGk 374 (873)
||+|+||++++++||+|||.+..+..... .......+||+.|+|||...++. .+.+.||||+||+||-|+.|+
T Consensus 237 KPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~ 316 (576)
T KOG0585|consen 237 KPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQ 316 (576)
T ss_pred chhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhcc
Confidence 99999999999999999999987633221 11223367999999999887742 356789999999999999999
Q ss_pred CCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCC
Q 002857 375 RPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGE 454 (873)
Q Consensus 375 ~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~e 454 (873)
.||.+.+ ..++.+...... +..|... +.-+.+.+|++++|+.||++
T Consensus 317 ~PF~~~~-----------------~~~l~~KIvn~p----------L~fP~~p-------e~~e~~kDli~~lL~KdP~~ 362 (576)
T KOG0585|consen 317 LPFFDDF-----------------ELELFDKIVNDP----------LEFPENP-------EINEDLKDLIKRLLEKDPEQ 362 (576)
T ss_pred CCcccch-----------------HHHHHHHHhcCc----------ccCCCcc-------cccHHHHHHHHHHhhcChhh
Confidence 9996521 112222221110 1111111 12335778999999999999
Q ss_pred CCCHHHHHHHH
Q 002857 455 RMKINDVELGL 465 (873)
Q Consensus 455 RPTm~EVl~~L 465 (873)
|.+..+|....
T Consensus 363 Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 363 RITLPDIKLHP 373 (576)
T ss_pred eeehhhheecc
Confidence 99999885443
No 91
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.4e-35 Score=316.13 Aligned_cols=261 Identities=22% Similarity=0.305 Sum_probs=204.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||+|....+++.+|||.+.... ......+.+|+.+++.++|+||+++++++ ..++.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASF-----IEDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhhee-----EeCCe
Confidence 46888899999999999999998899999999876432 22335788999999999999999999986 34567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++++|.+++... ......+++..++.++.||+.||.||| +.+|+|+||||+||+++.++.++|
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l 147 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHF------KKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKL 147 (267)
T ss_pred EEEEEEecCCCCHHHHHHHh------hccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEE
Confidence 89999999999999988521 123456899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||++........ ......++..|+|||++.+..++.++||||||+++|||++|..||.....+...+..
T Consensus 148 ~dfg~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~------- 218 (267)
T cd08229 148 GDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK------- 218 (267)
T ss_pred CcchhhhccccCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh-------
Confidence 99999886543221 122345889999999998888999999999999999999999998642111100000
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
...... .+... . ......+.+++.+||+.+|++||||.+|+++++++
T Consensus 219 --------~~~~~~------------~~~~~--~---~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 219 --------KIEQCD------------YPPLP--S---DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred --------hhhcCC------------CCCCC--c---ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 000000 00000 0 01233578899999999999999999999999875
No 92
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.4e-35 Score=316.87 Aligned_cols=259 Identities=24% Similarity=0.296 Sum_probs=199.7
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeeccccc-CC
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQ-GN 234 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~-~~ 234 (873)
.++..|++.+.||+|+||.||+|.+..+++.||+|++.... .....+..|+.++.++ +|+||+++++++...... ..
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45678889999999999999999998899999999987543 3346788999999999 799999999997543211 13
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++|+|.+++.. .....+++..+..++.|++.||+||| +.+|+|+||||+||++++++.+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~--------~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~ 150 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKN--------TKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEV 150 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHh--------ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCE
Confidence 468999999999999999853 22346889999999999999999999 8899999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccC-----CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHH
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM-----GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQN 389 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~ 389 (873)
||+|||+++....... ......|+..|+|||++. +..++.++|||||||++|||++|+.||....... .
T Consensus 151 ~l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~----~ 224 (272)
T cd06637 151 KLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----A 224 (272)
T ss_pred EEccCCCceecccccc--cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH----H
Confidence 9999999986533221 122345889999999986 3457889999999999999999999986421110 0
Q ss_pred HHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 390 WVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 390 ~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.. .+... ... .... . .+...+.+++.+||+.+|.+|||+.||++
T Consensus 225 ~~---------~~~~~-~~~------------~~~~----~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 225 LF---------LIPRN-PAP------------RLKS----K----KWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HH---------HHhcC-CCC------------CCCC----C----CcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00 00000 000 0000 0 01234778999999999999999999864
No 93
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.4e-35 Score=318.01 Aligned_cols=273 Identities=24% Similarity=0.364 Sum_probs=204.5
Q ss_pred cCCCcceeecccCceEEEEEEEcC----CCcEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE----GAPAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~----~g~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
+.|+..+.||+|+||.||+|++.. ++..||||+++..... ..+.|.+|++++++++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CCC
Confidence 357778999999999999998743 3788999999755443 45789999999999999999999998642 235
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++++|.+++.. ....+++..++.++.|++.||+||| +.+|+|+||||+||+++.++.+
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~---------~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~ 148 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQR---------HRDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLV 148 (284)
T ss_pred CceEEEEecCCCCCHHHHHHh---------CccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCE
Confidence 578999999999999999953 2336899999999999999999999 8999999999999999999999
Q ss_pred EEecccccccccccccc-ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+|+|||++......... .......++..|+|||.+.+..++.++||||||+++|||+||+.|+................
T Consensus 149 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 228 (284)
T cd05038 149 KISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQG 228 (284)
T ss_pred EEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccc
Confidence 99999999876532211 11112235667999999988899999999999999999999999986532211110000000
Q ss_pred -cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 394 -ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 394 -~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
.....+.+.+.... ..+. ...+..++.+++.+||+.+|++||||.||+++|+.+
T Consensus 229 ~~~~~~~~~~~~~~~--------------~~~~-------~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 229 QMIVTRLLELLKEGE--------------RLPR-------PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cccHHHHHHHHHcCC--------------cCCC-------CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 00001111111000 0000 011234688999999999999999999999999876
No 94
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.2e-35 Score=321.59 Aligned_cols=269 Identities=22% Similarity=0.364 Sum_probs=204.3
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCC-----CcEEEEEEeeccCC-cchhHHHHHHHHHHhh-hhccceeeeeeeeccc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEG-----APAVAIKVFNFLHH-DASKSFTVECEVMRNI-IHRKIIKVVTACSRVD 230 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~-----g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~ 230 (873)
..++|++.+.||+|+||.||++.+... ...+|+|++..... .....+.+|++++.++ +|+||+++++++
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~---- 85 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC---- 85 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE----
Confidence 345788899999999999999987543 36899999874322 2345688999999999 899999999986
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccc------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCC
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEED------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPS 304 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKps 304 (873)
..++..++||||+++|+|.++++...... ........+++..++.++.||+.||+||| +.+|+||||||+
T Consensus 86 -~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~ 161 (293)
T cd05053 86 -TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAAR 161 (293)
T ss_pred -cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCcccccccee
Confidence 34567899999999999999985421000 00123456899999999999999999999 899999999999
Q ss_pred CeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCccccc
Q 002857 305 NILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKD 383 (873)
Q Consensus 305 NILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~ 383 (873)
|||+++++.+||+|||+++.+.............++..|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 162 Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 241 (293)
T cd05053 162 NVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241 (293)
T ss_pred eEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence 99999999999999999987644322222222335678999999988899999999999999999998 98888642111
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
. +.+.+...... ..+ ..+...+.+++.+||+.+|++||||.||++
T Consensus 242 ~--------------~~~~~~~~~~~------------~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~eil~ 286 (293)
T cd05053 242 E--------------LFKLLKEGYRM------------EKP---------QNCTQELYHLMRDCWHEVPSQRPTFKQLVE 286 (293)
T ss_pred H--------------HHHHHHcCCcC------------CCC---------CCCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 0 01111000000 000 011335789999999999999999999999
Q ss_pred HHHHHH
Q 002857 464 GLRLIK 469 (873)
Q Consensus 464 ~Le~i~ 469 (873)
.|+.+.
T Consensus 287 ~l~~~~ 292 (293)
T cd05053 287 DLDRML 292 (293)
T ss_pred HHHHhh
Confidence 998763
No 95
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.6e-35 Score=320.79 Aligned_cols=200 Identities=25% Similarity=0.328 Sum_probs=171.8
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
+|++.++||+|+||.||++.+..+++.||+|++..... .....+.+|+.++++++|+||+++++.+ ..++..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeee-----cCCCeE
Confidence 47888999999999999999988899999999864321 2234578899999999999999999985 445679
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++|+|.+++.. .....+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+
T Consensus 76 ~lv~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~ 144 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYN--------MGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRIS 144 (285)
T ss_pred EEEEeccCCCcHHHHHHh--------cCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEe
Confidence 999999999999988843 22346899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|||+++....... .....|+..|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 145 Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~ 203 (285)
T cd05605 145 DLGLAVEIPEGET---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQ 203 (285)
T ss_pred eCCCceecCCCCc---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCC
Confidence 9999986533221 1234589999999999988999999999999999999999999975
No 96
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.9e-35 Score=329.35 Aligned_cols=270 Identities=20% Similarity=0.303 Sum_probs=201.4
Q ss_pred cCCCcceeecccCceEEEEEEEc-----CCCcEEEEEEeeccCC-cchhHHHHHHHHHHhh-hhccceeeeeeeeccccc
Q 002857 160 KGFSSENLIGAGNFASVYKGILF-----EGAPAVAIKVFNFLHH-DASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~-----~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~ 232 (873)
++|.+.+.||+|+||.||+|.+. .+++.||||+++.... .....+.+|+.++.++ +|+||++++++|. .
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~----~ 82 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT----K 82 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceee----c
Confidence 57889999999999999999853 3567899999974332 2345688999999999 6899999999874 3
Q ss_pred CCceEEEEEeecCCCChhhhccccccccc---------------------------------------------------
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDK--------------------------------------------------- 261 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~--------------------------------------------------- 261 (873)
.+...++||||+++|+|.++++.......
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (343)
T cd05103 83 PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE 162 (343)
T ss_pred CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence 34567899999999999999853110000
Q ss_pred ------ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccccccccccccc
Q 002857 262 ------RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSI 335 (873)
Q Consensus 262 ------~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~ 335 (873)
.......+++.++..++.||++||+||| +.+|+||||||+|||++.++++||+|||+++............
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 239 (343)
T cd05103 163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKG 239 (343)
T ss_pred hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcC
Confidence 0001134788889999999999999999 8999999999999999999999999999998653332222222
Q ss_pred ccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHH
Q 002857 336 GVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEE 414 (873)
Q Consensus 336 ~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r 414 (873)
...++..|+|||++.+..++.++||||||+++|||++ |..||....... .+...+.....
T Consensus 240 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------------~~~~~~~~~~~------ 300 (343)
T cd05103 240 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-------------EFCRRLKEGTR------ 300 (343)
T ss_pred CCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-------------HHHHHHhccCC------
Confidence 2345678999999988899999999999999999997 998986521110 00000000000
Q ss_pred HHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 415 ETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 415 ~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
...|.. ....+.+++..||+.+|++|||+.||++.|+.+.+
T Consensus 301 ------~~~~~~---------~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 301 ------MRAPDY---------TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred ------CCCCCC---------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 000110 11247889999999999999999999999998754
No 97
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.2e-36 Score=333.98 Aligned_cols=254 Identities=22% Similarity=0.317 Sum_probs=200.4
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|.+.+.||+|+||.||+|++..+++.||||+++.. .......+..|++++..++|+||+++++++ ..++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF-----QDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe-----ecCCe
Confidence 4789999999999999999999888999999999743 223456788999999999999999999885 55678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ...+++..++.++.||+.||+||| ..+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL 142 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIR----------KDVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKL 142 (350)
T ss_pred EEEEEcCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEe
Confidence 9999999999999999843 256889999999999999999999 899999999999999999999999
Q ss_pred ecccccccccccc---------------------------ccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHH
Q 002857 317 ADFGIARFLEATN---------------------------EQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLE 369 (873)
Q Consensus 317 sDFGla~~~~~~~---------------------------~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~E 369 (873)
+|||+++...... .........||..|+|||++.+..++.++|||||||++||
T Consensus 143 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 222 (350)
T cd05573 143 ADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYE 222 (350)
T ss_pred ecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhh
Confidence 9999998654332 0011223468999999999999999999999999999999
Q ss_pred HHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhc
Q 002857 370 MFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSA 449 (873)
Q Consensus 370 LlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~ 449 (873)
|++|+.||....... ....+.... .. ...|.... ....+.+++..|++
T Consensus 223 ll~g~~Pf~~~~~~~-------------~~~~i~~~~--~~----------~~~p~~~~-------~~~~~~~li~~ll~ 270 (350)
T cd05573 223 MLYGFPPFYSDTLQE-------------TYNKIINWK--ES----------LRFPPDPP-------VSPEAIDLICRLLC 270 (350)
T ss_pred hccCCCCCCCCCHHH-------------HHHHHhccC--Cc----------ccCCCCCC-------CCHHHHHHHHHHcc
Confidence 999999997532110 001111100 00 00011000 12347789999997
Q ss_pred cCcCCCCC-HHHHHHH
Q 002857 450 ELPGERMK-INDVELG 464 (873)
Q Consensus 450 ~dP~eRPT-m~EVl~~ 464 (873)
+|.+||+ +.|+++.
T Consensus 271 -dp~~R~~s~~~ll~h 285 (350)
T cd05573 271 -DPEDRLGSFEEIKSH 285 (350)
T ss_pred -ChhhcCCCHHHHhcC
Confidence 9999999 9998763
No 98
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.7e-35 Score=320.44 Aligned_cols=268 Identities=19% Similarity=0.318 Sum_probs=200.5
Q ss_pred hhcCCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
.+++|++.++||+|+||.||+|.... .+..||+|.++.... .....+.+|+.++++++|+||+++++++
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~----- 78 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV----- 78 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE-----
Confidence 46789999999999999999997642 245799998764332 2234688899999999999999999985
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
......++||||+++|+|.+++...............+++..++.++.||+.||+||| +++|+||||||+|||++++
T Consensus 79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~ 155 (288)
T cd05061 79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 155 (288)
T ss_pred cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCC
Confidence 3455789999999999999999642111111112344567788999999999999999 8999999999999999999
Q ss_pred CCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHH
Q 002857 312 MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~ 390 (873)
+.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.....+. ..
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~--~~-- 231 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ--VL-- 231 (288)
T ss_pred CcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HH--
Confidence 9999999999986543222221222235678999999998899999999999999999999 788886421111 00
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
..+.+...... + ..+...+.+++.+||+.+|++|||+.++++.|+..
T Consensus 232 ---------~~~~~~~~~~~-------------~---------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 232 ---------KFVMDGGYLDQ-------------P---------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred ---------HHHHcCCCCCC-------------C---------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 01111000000 0 01123588999999999999999999999988864
No 99
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.1e-35 Score=332.54 Aligned_cols=283 Identities=20% Similarity=0.217 Sum_probs=199.0
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+++++.++|+||+++++++...........+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788999999999999999998899999999986432 22346788999999999999999999987432211223689
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+. ++|.+++. ....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 81 lv~e~~~-~~l~~~~~----------~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~D 146 (372)
T cd07853 81 VVTELMQ-SDLHKIIV----------SPQPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICD 146 (372)
T ss_pred EEeeccc-cCHHHHHh----------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEecc
Confidence 9999996 57888773 2456899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||+++....... .......++..|+|||++.+. .++.++|||||||++|||++|+.||....... ....+......
T Consensus 147 fg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~~g~ 223 (372)
T cd07853 147 FGLARVEEPDES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ--QLDLITDLLGT 223 (372)
T ss_pred ccceeecccCcc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHcCC
Confidence 999986543221 112234578899999998874 57899999999999999999999997632211 11111111111
Q ss_pred -hHHHHhhhhhhhhhhHHHHH-hhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 398 -RVEEIVDTLFFKEIEEEETV-YKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 398 -~l~elid~~L~~~~~~r~~~-~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
...++... .. . .+... ......+...............+.+++.+||+.||++|||+.|+++.
T Consensus 224 ~~~~~~~~~-~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 224 PSLEAMRSA-CE-G--ARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred CCHHHHHHh-hH-H--HHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 11111000 00 0 00000 00000010000000001113457899999999999999999998763
No 100
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1e-35 Score=320.49 Aligned_cols=264 Identities=22% Similarity=0.372 Sum_probs=198.9
Q ss_pred CCCcceeecccCceEEEEEEEcCC-----CcEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 161 GFSSENLIGAGNFASVYKGILFEG-----APAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~-----g~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
+|.+.+.||+|+||.||+|.+..+ +..||||+++..... ....+.+|+.+++.++|+||+++++++ ...
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~-----~~~ 80 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVV-----TKE 80 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEE-----cCC
Confidence 467788999999999999987542 478999998744332 235688999999999999999999996 345
Q ss_pred ceEEEEEeecCCCChhhhccccccc------ccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEE------DKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~------~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
...++++||+++++|.+++...... .........+++..++.++.|++.||+||| +.+|+||||||+|||+
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~ 157 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLV 157 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEe
Confidence 5689999999999999998421100 001112345888899999999999999999 8999999999999999
Q ss_pred CCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhh
Q 002857 309 NDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNL 387 (873)
Q Consensus 309 d~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l 387 (873)
++++.+||+|||+++...............+++.|+|||++.+..++.++||||||+++|||++ |..||...... ..
T Consensus 158 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~ 235 (283)
T cd05091 158 FDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DV 235 (283)
T ss_pred cCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH--HH
Confidence 9999999999999886543322222223346788999999988889999999999999999998 88887652111 01
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
. ..+.+.... +. ...+...+.+++..||+.+|++||++.+|+..|+.
T Consensus 236 ~-----------~~i~~~~~~---------------~~-------~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 236 I-----------EMIRNRQVL---------------PC-------PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred H-----------HHHHcCCcC---------------CC-------CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1 011110000 00 01123457889999999999999999999999863
No 101
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.5e-35 Score=314.64 Aligned_cols=258 Identities=28% Similarity=0.466 Sum_probs=200.7
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCc---EEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAP---AVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~---~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
+++|+..+.||+|+||.||+|++..++. .+|+|.++... ....+.+.+|++++++++|+||+++++++ ...
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 78 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVV-----TKF 78 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-----ccC
Confidence 3578889999999999999999865544 79999986442 23346789999999999999999999996 445
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
+..++||||+++++|.+++.. ....+++.+++.++.|++.||+||| +.+|+|+||||+||+++.++.+
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~ 146 (268)
T cd05063 79 KPAMIITEYMENGALDKYLRD---------HDGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLEC 146 (268)
T ss_pred CCcEEEEEcCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcE
Confidence 678999999999999999842 2356899999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccc-cccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHh
Q 002857 315 CVADFGIARFLEATNEQTSS-IGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~-~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~ 392 (873)
||+|||++............ .....+..|+|||++.+..++.++||||||+++|||++ |+.||...... ...
T Consensus 147 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--~~~---- 220 (268)
T cd05063 147 KVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--EVM---- 220 (268)
T ss_pred EECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--HHH----
Confidence 99999999865432221111 11223457999999988889999999999999999998 99998642111 000
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
..+... . ..|.. ..+...+.+++.+||+.+|++||++.+|++.|+++
T Consensus 221 -------~~i~~~-~--------------~~~~~-------~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 221 -------KAINDG-F--------------RLPAP-------MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -------HHHhcC-C--------------CCCCC-------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 011000 0 00100 01234578999999999999999999999999875
No 102
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.6e-35 Score=322.25 Aligned_cols=259 Identities=22% Similarity=0.343 Sum_probs=200.5
Q ss_pred cCCCcceeecccCceEEEEEEEc-----CCCcEEEEEEeeccCC-cchhHHHHHHHHHHhh-hhccceeeeeeeeccccc
Q 002857 160 KGFSSENLIGAGNFASVYKGILF-----EGAPAVAIKVFNFLHH-DASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~-----~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~ 232 (873)
++|.+.+.||+|+||.||+|.+. ..+..||||+++.... ...+.+.+|+++++++ +|+||+++++++ .
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-----~ 109 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGAC-----T 109 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEE-----e
Confidence 46889999999999999999753 2345799999875432 3345789999999999 799999999986 3
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM 312 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~ 312 (873)
..+..++||||+++|+|.++++. .....+++.+++.++.||+.||+||| +.+|+|+||||+|||++.++
T Consensus 110 ~~~~~~lv~e~~~~~~L~~~i~~--------~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~ 178 (302)
T cd05055 110 IGGPILVITEYCCYGDLLNFLRR--------KRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGK 178 (302)
T ss_pred cCCceEEEEEcCCCCcHHHHHHh--------CCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCC
Confidence 45568999999999999999853 22234899999999999999999999 89999999999999999999
Q ss_pred CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHH
Q 002857 313 TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWV 391 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~ 391 (873)
.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||+| |..||.......
T Consensus 179 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~------- 251 (302)
T cd05055 179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS------- 251 (302)
T ss_pred eEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-------
Confidence 999999999986543322111222345778999999999999999999999999999998 999986532111
Q ss_pred hhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 392 QSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 392 ~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
.+...++...... .+. .....+.+++.+||+.+|++|||+.||++.|+++
T Consensus 252 ------~~~~~~~~~~~~~------------~~~---------~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 252 ------KFYKLIKEGYRMA------------QPE---------HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ------HHHHHHHcCCcCC------------CCC---------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1111111100000 000 0022478899999999999999999999999864
No 103
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.7e-36 Score=333.92 Aligned_cols=197 Identities=24% Similarity=0.376 Sum_probs=171.6
Q ss_pred cCCCcceeecccCceEEEEEEEcCCC-cEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGA-PAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g-~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
++|++.+.||+|+||.||+|.+..++ ..||+|++... .....+.+.+|+.+++.++||||+++++++ ....
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~ 104 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF-----KDES 104 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEE-----EeCC
Confidence 46889999999999999999876554 68999998643 223346788999999999999999999996 4566
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.+++.. ...+++..+..++.||+.||.||| +.+|+||||||+|||++.++++|
T Consensus 105 ~~~lv~Ey~~~g~L~~~i~~----------~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ik 171 (340)
T PTZ00426 105 YLYLVLEFVIGGEFFTFLRR----------NKRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIK 171 (340)
T ss_pred EEEEEEeCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEE
Confidence 89999999999999999842 346889999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 172 L~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 230 (340)
T PTZ00426 172 MTDFGFAKVVDTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYA 230 (340)
T ss_pred EecCCCCeecCCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCC
Confidence 9999999865321 1234689999999999998899999999999999999999999975
No 104
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-36 Score=325.28 Aligned_cols=279 Identities=24% Similarity=0.273 Sum_probs=207.4
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
.|...+++|.|+||.||+|+...+++.||||..-... +--.+|+++|+++.|||||+++-++....-.+.-...||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4667799999999999999999999999999874322 233569999999999999999988765432212356799
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC-CCeEEecc
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE-MTACVADF 319 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~-~~vKLsDF 319 (873)
||||+. +|.++++... ..+..++...+.-+..||.+||+||| +.+|+||||||.|+|+|.+ +.+||+||
T Consensus 101 leymP~-tL~~~~r~~~------~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDF 170 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYT------RANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDF 170 (364)
T ss_pred HHhchH-HHHHHHHHHh------hcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccC
Confidence 999987 9999986421 23567888889999999999999999 8999999999999999965 89999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
|.|+.+..+... .....|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.+... .+....+-+.+...
T Consensus 171 GSAK~L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~--~dQL~eIik~lG~P 245 (364)
T KOG0658|consen 171 GSAKVLVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS--VDQLVEIIKVLGTP 245 (364)
T ss_pred CcceeeccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH--HHHHHHHHHHhCCC
Confidence 999988665433 345678999999998886 799999999999999999999999987322 22222222222221
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+-+..+-.. +. .....+++.++|..... .....++++++.++++.+|.+|-++.|++.
T Consensus 246 t~e~I~~mn~~-y~-~~~~p~ik~~~~~~~~~---~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 246 TREDIKSMNPN-YT-EFKFPQIKAHPWHKVFF---KRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred CHHHHhhcCcc-cc-cccCcccccccceeecc---cCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 12222221111 11 12234456666643111 122345889999999999999999999874
No 105
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2e-35 Score=322.84 Aligned_cols=263 Identities=24% Similarity=0.420 Sum_probs=202.4
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCc----EEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAP----AVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~----~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
++|+..+.||+|+||.||+|.+..++. .||+|++..... .....+.+|+.++++++|+||++++++|..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~------ 80 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS------ 80 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC------
Confidence 467788999999999999999876665 578888864332 223468899999999999999999998732
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++|+||+++|+|.+++.. ....+++..++.++.||+.||+||| +.+|+|+||||+|||++.++.+
T Consensus 81 ~~~~~v~e~~~~g~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~ 148 (303)
T cd05110 81 PTIQLVTQLMPHGCLLDYVHE---------HKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHV 148 (303)
T ss_pred CCceeeehhcCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCce
Confidence 235799999999999999852 2345788899999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |+.||...... ...
T Consensus 149 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~----- 221 (303)
T cd05110 149 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIP----- 221 (303)
T ss_pred EEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHH-----
Confidence 9999999987643332222223345778999999998999999999999999999998 89998652111 111
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhhh
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKLL 473 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l~ 473 (873)
+++.... ..+... .+...+.+++..||..+|++||++.+|++.|+.+.....
T Consensus 222 -------~~~~~~~--------------~~~~~~-------~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 222 -------DLLEKGE--------------RLPQPP-------ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred -------HHHHCCC--------------CCCCCC-------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 1111000 000000 012247789999999999999999999999998866544
Q ss_pred cC
Q 002857 474 ET 475 (873)
Q Consensus 474 ~~ 475 (873)
..
T Consensus 274 ~~ 275 (303)
T cd05110 274 RY 275 (303)
T ss_pred hh
Confidence 33
No 106
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.2e-35 Score=327.99 Aligned_cols=197 Identities=25% Similarity=0.341 Sum_probs=167.5
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHH---HhhhhccceeeeeeeecccccCCc
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVM---RNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL---~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
|.+.+.||+|+||.||+|.+..+++.||||+++... ....+.+..|++++ ++++||||+++++++ ...+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~-----~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF-----QTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE-----EcCC
Confidence 667899999999999999998899999999997432 22345677776665 456799999999985 4567
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|..+++ ...+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+|
T Consensus 76 ~~~lv~E~~~~~~L~~~~~-----------~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~k 141 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIH-----------TDVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVK 141 (324)
T ss_pred EEEEEEcCCCCCcHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEE
Confidence 8999999999999998873 245899999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|+|||+++...... .......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 142 L~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~ 203 (324)
T cd05589 142 IADFGLCKEGMGFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPG 203 (324)
T ss_pred eCcccCCccCCCCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCC
Confidence 99999987532221 112235689999999999999999999999999999999999999965
No 107
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.5e-35 Score=313.74 Aligned_cols=254 Identities=27% Similarity=0.422 Sum_probs=199.0
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
.+|++.++||+|+||.||+|++..+ ..||+|+++.... ..+.+.+|++++++++|+||+++++++ .....++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~------~~~~~~l 77 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVV------SEEPIYI 77 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEE------CCCCcEE
Confidence 5689999999999999999987544 5699999875332 346789999999999999999999874 2345789
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++|+|.+++.. .....+++..++.++.|++.||+||| +.+|+|+||||+||++++++.+||+||
T Consensus 78 v~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~df 146 (262)
T cd05071 78 VTEYMSKGSLLDFLKG--------EMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 146 (262)
T ss_pred EEEcCCCCcHHHHHhh--------ccccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccC
Confidence 9999999999999953 22345789999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
|.++.+..... .......++..|+|||+..+..++.++||||||+++|||+| |..||.......
T Consensus 147 g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-------------- 211 (262)
T cd05071 147 GLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------------- 211 (262)
T ss_pred Cceeecccccc-ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH--------------
Confidence 99986643321 11222346778999999988899999999999999999999 888886532111
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
+.+...... ..+. ..++...+.+++.+||+.+|++||++.++++.|+..
T Consensus 212 ---~~~~~~~~~-----------~~~~-------~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 212 ---VLDQVERGY-----------RMPC-------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ---HHHHHhcCC-----------CCCC-------ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 000000000 0000 011234578999999999999999999999999864
No 108
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.9e-35 Score=318.56 Aligned_cols=270 Identities=21% Similarity=0.284 Sum_probs=207.4
Q ss_pred cCHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeec
Q 002857 150 VSYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSR 228 (873)
Q Consensus 150 ~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~ 228 (873)
+.++.+..++++|++.+.||+|+||.||++.+..+++.+|+|+++... .....+.+|+.+++++ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 455677788999999999999999999999998899999999986432 2236788899999999 69999999998754
Q ss_pred ccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 229 VDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 229 ~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
.....+...++||||+++++|.++++.. ......+++..+..++.|++.||.||| +.+|+||||||+||++
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili 157 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGF------LKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILL 157 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHh------hccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEE
Confidence 4444566799999999999999987531 122356888899999999999999999 8999999999999999
Q ss_pred CCCCCeEEeccccccccccccccccccccccccccCCCcccCC-----CCCCcchhhHhHHHHHHHHHhCCCCCCccccc
Q 002857 309 NDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-----HETSSYGDVYSFGILLLEMFTGLRPSDDMFKD 383 (873)
Q Consensus 309 d~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~ 383 (873)
+.++.+||+|||+++...... .......|+..|+|||++.. ..++.++|||||||++|||++|+.||......
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~ 235 (286)
T cd06638 158 TTEGGVKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM 235 (286)
T ss_pred CCCCCEEEccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh
Confidence 999999999999998654321 11223458999999998753 45788999999999999999999998652110
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
. . +..+.... ... . ..+. .....+.+++.+||+.+|++|||+.||++
T Consensus 236 ~----~---------~~~~~~~~-~~~---------~-~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~ell~ 282 (286)
T cd06638 236 R----A---------LFKIPRNP-PPT---------L-HQPE---------LWSNEFNDFIRKCLTKDYEKRPTVSDLLQ 282 (286)
T ss_pred H----H---------HhhccccC-CCc---------c-cCCC---------CcCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0 0 00000000 000 0 0000 01224778999999999999999999986
Q ss_pred H
Q 002857 464 G 464 (873)
Q Consensus 464 ~ 464 (873)
.
T Consensus 283 ~ 283 (286)
T cd06638 283 H 283 (286)
T ss_pred c
Confidence 4
No 109
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=7e-36 Score=334.76 Aligned_cols=202 Identities=23% Similarity=0.351 Sum_probs=173.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|+++|..++|+||+++++++ ..+..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF-----QDENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCe
Confidence 47899999999999999999999899999999997432 23345688899999999999999999985 55678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||+++|+|.+++.. ...+++..+..|+.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~E~~~~g~L~~~l~~----------~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl 142 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMK----------KDTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKL 142 (364)
T ss_pred EEEEECCCCCcHHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEE
Confidence 9999999999999999842 346899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccc------------------------------------cccccccccccCCCcccCCCCCCcchhh
Q 002857 317 ADFGIARFLEATNEQT------------------------------------SSIGVKGTTGYIAPEYGMGHETSSYGDV 360 (873)
Q Consensus 317 sDFGla~~~~~~~~~~------------------------------------~~~~~~Gt~~Y~APE~l~~~~~s~ksDV 360 (873)
+|||+++.+....... ......||+.|+|||++.+..++.++||
T Consensus 143 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 222 (364)
T cd05599 143 SDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDW 222 (364)
T ss_pred eecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeee
Confidence 9999987543211000 0112358999999999999999999999
Q ss_pred HhHHHHHHHHHhCCCCCCc
Q 002857 361 YSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 361 wSfGvvL~ELlTGk~Pf~~ 379 (873)
|||||++|||++|..||..
T Consensus 223 wSlG~il~el~~G~~Pf~~ 241 (364)
T cd05599 223 WSLGVIMYEMLVGYPPFCS 241 (364)
T ss_pred ecchhHHHHhhcCCCCCCC
Confidence 9999999999999999975
No 110
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.9e-35 Score=318.84 Aligned_cols=264 Identities=24% Similarity=0.398 Sum_probs=201.0
Q ss_pred cCCCcceeecccCceEEEEEEEc-----CCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILF-----EGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~-----~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
++|...++||+|+||.||++... ..+..+|+|.+..........+.+|++++++++|+||+++++++ ...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVC-----TEG 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEE-----ecC
Confidence 46777899999999999999743 24568999998766555567899999999999999999999985 345
Q ss_pred ceEEEEEeecCCCChhhhcccccccc-----cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEED-----KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~-----~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
...++||||+++|+|.+++....... ........+++..++.++.||+.||+||| +.+|+||||||+|||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~ 156 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVG 156 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEc
Confidence 66899999999999999986421100 00112246899999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhH
Q 002857 310 DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 310 ~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~ 388 (873)
+++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||....... .
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~- 233 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE--A- 233 (280)
T ss_pred CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH--H-
Confidence 999999999999975533221111222335678999999999999999999999999999998 899986422111 0
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
...+...... ..+ ..+...+.+++.+||+.+|++||++.||++.|+
T Consensus 234 ----------~~~~~~~~~~-------------~~~---------~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 234 ----------IECITQGREL-------------ERP---------RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ----------HHHHHcCccC-------------CCC---------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 0000000000 000 011234778999999999999999999999886
No 111
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=4.9e-35 Score=310.76 Aligned_cols=253 Identities=21% Similarity=0.314 Sum_probs=198.3
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-----cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-----DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-----~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
++|.+.+.||+|++|.||+|....+++.||+|.+..... ...+.+.+|++++++++|+||+++++++ ..+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCL-----RDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ccC
Confidence 578999999999999999999988899999999864321 1235688899999999999999999995 445
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++++|.+++.. ...+++..+..++.|++.||.||| +.+|+|+||+|+||++++++.+
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~----------~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~ 143 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKA----------YGALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNV 143 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHH----------hCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCE
Confidence 689999999999999999842 345788899999999999999999 8999999999999999999999
Q ss_pred EEecccccccccccccccc-ccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQTS-SIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~-~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+|+|||+++.......... .....++..|+|||++.+..++.++||||||+++|||++|+.||....... .
T Consensus 144 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~---- 215 (263)
T cd06625 144 KLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA----A---- 215 (263)
T ss_pred EEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH----H----
Confidence 9999999976543221111 123457889999999999999999999999999999999999986521110 0
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
............ .+ ......+.+++.+||+.+|++|||+.|+++.
T Consensus 216 -----~~~~~~~~~~~~------------~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 216 -----IFKIATQPTNPQ------------LP---------SHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -----HHHHhccCCCCC------------CC---------ccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 000000000000 00 0112347789999999999999999998763
No 112
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4.8e-35 Score=310.83 Aligned_cols=249 Identities=28% Similarity=0.427 Sum_probs=195.1
Q ss_pred eeecccCceEEEEEEEcCCC---cEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGA---PAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g---~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
++||+|+||.||+|++...+ ..||+|.+..... ...+.+.+|+++++++.|+||+++++++. ....++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK------GEPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc------CCceEEEE
Confidence 47999999999999876544 7899999875443 24467899999999999999999999852 34579999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|.+++.. ...+++..++.++.|++.||+||| ..+++|+||||+|||++.++.+||+|||+
T Consensus 75 e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~ 141 (257)
T cd05060 75 ELAPLGPLLKYLKK----------RREIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGM 141 (257)
T ss_pred EeCCCCcHHHHHHh----------CCCCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccc
Confidence 99999999999943 236899999999999999999999 88999999999999999999999999999
Q ss_pred cccccccccccc-ccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhH
Q 002857 322 ARFLEATNEQTS-SIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 322 a~~~~~~~~~~~-~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
++.......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||..... ..+..++....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~---- 215 (257)
T cd05060 142 SRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGE---- 215 (257)
T ss_pred cceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCC----
Confidence 986644332111 111224568999999998899999999999999999998 9999865321 11111111000
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
..+.. ..+...+.+++.+||+.+|++||++.+|++.|+++
T Consensus 216 ----------------------~~~~~-------~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 216 ----------------------RLPRP-------EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred ----------------------cCCCC-------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 00000 01123578899999999999999999999999875
No 113
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.8e-35 Score=317.62 Aligned_cols=247 Identities=22% Similarity=0.268 Sum_probs=191.0
Q ss_pred ecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeec
Q 002857 168 IGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFM 244 (873)
Q Consensus 168 LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~ 244 (873)
||+|+||.||++....+++.||+|.+.... ....+.+..|++++++++||||+++++++ ..+...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEecC
Confidence 799999999999998899999999986322 12234566799999999999999999885 4567899999999
Q ss_pred CCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 245 PNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 245 ~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
++++|.+++.. .....+++..++.++.||+.||+||| +.+|+||||||+||+++.++.++|+|||++..
T Consensus 76 ~g~~L~~~~~~--------~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~ 144 (277)
T cd05607 76 NGGDLKYHIYN--------VGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVE 144 (277)
T ss_pred CCCCHHHHHHh--------ccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeee
Confidence 99999988843 23345888999999999999999999 89999999999999999999999999999976
Q ss_pred cccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhh
Q 002857 325 LEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVD 404 (873)
Q Consensus 325 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid 404 (873)
..... ......|+..|+|||++.+..++.++|||||||++|||++|+.||....... .. .++..
T Consensus 145 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~------------~~~~~ 208 (277)
T cd05607 145 LKDGK---TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AK------------EELKR 208 (277)
T ss_pred cCCCc---eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hH------------HHHHH
Confidence 54322 1123458999999999999889999999999999999999999986521110 00 01111
Q ss_pred hhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 405 TLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 405 ~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
..+..... .+. .....++.+++.+||+.||++||++.|+++.
T Consensus 209 ~~~~~~~~----------~~~--------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 209 RTLEDEVK----------FEH--------QNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred Hhhccccc----------ccc--------ccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 11110000 000 0012347789999999999999999887643
No 114
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-35 Score=345.49 Aligned_cols=271 Identities=23% Similarity=0.296 Sum_probs=210.7
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-hccceeeeeeeeccc-ccC-Cc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-HRKIIKVVTACSRVD-YQG-ND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~-~~~-~~ 235 (873)
..++++.++|.+|||+.||.|.+..++..||+|++-..+....+.+.+||++|++|. |+|||.+++...... ... .-
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 346678999999999999999998887999999987667777788999999999996 999999999422211 122 24
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
+.+|+||||.+|+|-++|.. .-...|++.++++|+.|+++|+++|| .+..+|||||||-+||||+.+++.|
T Consensus 116 EvllLmEyC~gg~Lvd~mn~--------Rlq~~lte~eVLkIf~dv~~AVa~mH-~~~pPiIHRDLKiENvLls~~g~~K 186 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNT--------RLQTRLTEDEVLKIFYDVCEAVAAMH-YLKPPIIHRDLKIENVLLSADGNYK 186 (738)
T ss_pred EEEeehhhccCCcHHHHHHH--------HHhccCChHHHHHHHHHHHHHHHHHh-cCCCccchhhhhhhheEEcCCCCEE
Confidence 68999999999999999953 12334999999999999999999999 4578899999999999999999999
Q ss_pred Eeccccccccccccccc-------cccccccccccCCCccc---CCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccch
Q 002857 316 VADFGIARFLEATNEQT-------SSIGVKGTTGYIAPEYG---MGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNL 385 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~-------~~~~~~Gt~~Y~APE~l---~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~ 385 (873)
|+|||.|.-........ ......-|+.|+|||++ .+..+++|+|||+|||+||-|+....||+....-
T Consensus 187 LCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l-- 264 (738)
T KOG1989|consen 187 LCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL-- 264 (738)
T ss_pred eCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--
Confidence 99999986322111100 01122368999999974 5678999999999999999999999999863111
Q ss_pred hhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 386 NLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 386 ~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
.|++. .+ ..|..+. ....|.+||..||+.||.+||++-+|++.+
T Consensus 265 ---------------aIlng----~Y----------~~P~~p~-------ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 265 ---------------AILNG----NY----------SFPPFPN-------YSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred ---------------eEEec----cc----------cCCCCcc-------HHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 11111 11 0111111 133588999999999999999999999999
Q ss_pred HHHHHhhhcCC
Q 002857 466 RLIKKKLLETP 476 (873)
Q Consensus 466 e~i~~~l~~~~ 476 (873)
-+|...-.+..
T Consensus 309 ~~l~~~~~~~~ 319 (738)
T KOG1989|consen 309 FELANKPCPIP 319 (738)
T ss_pred HHHhcCCCCcc
Confidence 98877555443
No 115
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.1e-35 Score=318.98 Aligned_cols=196 Identities=26% Similarity=0.343 Sum_probs=167.1
Q ss_pred ecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeec
Q 002857 168 IGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFM 244 (873)
Q Consensus 168 LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~ 244 (873)
||+|+||+||++.+..+++.||+|.+..... ...+.+..|++++++++|+||+++.+++ ......++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF-----QTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE-----cCCCeEEEEEeCC
Confidence 7999999999999988999999999864322 2235678899999999999999999885 4566789999999
Q ss_pred CCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 245 PNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 245 ~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
++|+|.+++... ......+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 76 ~~g~L~~~~~~~------~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 146 (280)
T cd05608 76 NGGDLRYHIYNV------DEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVE 146 (280)
T ss_pred CCCCHHHHHHhc------cccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCcccee
Confidence 999999887431 123456899999999999999999999 89999999999999999999999999999976
Q ss_pred cccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 325 LEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 325 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+..... ......||..|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 147 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 199 (280)
T cd05608 147 LKDGQS--KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRA 199 (280)
T ss_pred cCCCCc--cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 543222 12234689999999999999999999999999999999999999965
No 116
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.5e-35 Score=310.87 Aligned_cols=250 Identities=24% Similarity=0.355 Sum_probs=196.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
++|++.+.||+|+||.||++.. .+..||+|.++.. ...+.+.+|+.++++++|+|++++++++. ..+...++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEE----cCCCceEE
Confidence 4688899999999999999976 4678999998643 23467899999999999999999999753 34556899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++++|.++++. .....+++..++.++.||+.||+||| +.+|+||||||+||++++++.+||+||
T Consensus 78 v~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df 146 (256)
T cd05082 78 VTEYMAKGSLVDYLRS--------RGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDF 146 (256)
T ss_pred EEECCCCCcHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCC
Confidence 9999999999999853 22345889999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
|+++...... ....++..|+|||++.+..++.++||||||+++|||++ |+.||...... .+...
T Consensus 147 g~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~--~~~~~-------- 211 (256)
T cd05082 147 GLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPR-------- 211 (256)
T ss_pred ccceeccccC-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH--------
Confidence 9987543221 12235678999999998899999999999999999998 99998642110 00000
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
+....... . ...+...+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 212 ----~~~~~~~~--------------~-------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 212 ----VEKGYKMD--------------A-------PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ----HhcCCCCC--------------C-------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 00000000 0 001233578899999999999999999999998753
No 117
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=5.7e-36 Score=330.80 Aligned_cols=243 Identities=21% Similarity=0.267 Sum_probs=191.7
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEe
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
+.||+|+||.||++....+++.||+|+++... ......+..|++++..++|+||+++++++ ...+..+||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~-----~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EcCCEEEEEEe
Confidence 46999999999999998899999999997432 23345678899999999999999999885 45678999999
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCK-PPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s-~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
|+++|+|.+++. ....+++..+..++.||+.||+||| + .+|+||||||+|||++.++.+||+|||+
T Consensus 76 ~~~~~~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~ 142 (325)
T cd05594 76 YANGGELFFHLS----------RERVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGL 142 (325)
T ss_pred CCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCC
Confidence 999999998884 2356899999999999999999999 6 7999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHH
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEE 401 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~e 401 (873)
++...... .......||..|+|||++.+..++.++|||||||++|||+||+.||.....+. .. .
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~--~~------------~ 206 (325)
T cd05594 143 CKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LF------------E 206 (325)
T ss_pred CeecCCCC--cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHH--HH------------H
Confidence 87532221 11223468999999999999999999999999999999999999996521110 00 0
Q ss_pred HhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-----CHHHHHHH
Q 002857 402 IVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-----KINDVELG 464 (873)
Q Consensus 402 lid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-----Tm~EVl~~ 464 (873)
.+ ..... ..|. .....+.+++.+||+.||++|+ ++.++++.
T Consensus 207 ~i---~~~~~----------~~p~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 207 LI---LMEEI----------RFPR---------TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HH---hcCCC----------CCCC---------CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 00 00000 0000 0122467899999999999996 88888753
No 118
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.5e-36 Score=337.36 Aligned_cols=198 Identities=26% Similarity=0.392 Sum_probs=176.0
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
-|...+.||.|+-|.|-+|++..+|+.+|||++... .......+.+||-||+.|.||||++++++ +++..++
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV-----we~~~~l 87 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV-----WENKQHL 87 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee-----eccCceE
Confidence 467889999999999999999999999999999754 22234568899999999999999999999 5788899
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
|||.||+++|-|.++|- ..+.+++.+..+++.||+.|+.|.| ..+|+||||||+|+|||..+++||+
T Consensus 88 ylvlEyv~gGELFdylv----------~kG~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIA 154 (786)
T KOG0588|consen 88 YLVLEYVPGGELFDYLV----------RKGPLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIA 154 (786)
T ss_pred EEEEEecCCchhHHHHH----------hhCCCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeee
Confidence 99999999999999993 4678999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCC-CcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET-SSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|||+|.+-..+. .-...+|++.|.|||+++|..| ..++||||.|||||.||||+.||++
T Consensus 155 DFGMAsLe~~gk---lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD 214 (786)
T KOG0588|consen 155 DFGMASLEVPGK---LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD 214 (786)
T ss_pred ccceeecccCCc---cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC
Confidence 999998643322 2234579999999999999987 5679999999999999999999986
No 119
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.5e-35 Score=335.00 Aligned_cols=201 Identities=22% Similarity=0.326 Sum_probs=171.9
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.|+..+.||+|+||+||+|++..+++.||||++.... ......+.+|++++++++|+||+++++++ .+.+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~-----~~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSF-----QDKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEE-----ecCCEE
Confidence 5888999999999999999999999999999997432 23345788999999999999999999985 456789
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++|+|.+++.. ...+++..+..++.||+.||+||| ..+|+||||||+|||++.++++||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~----------~~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~ 143 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIR----------MEVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLT 143 (381)
T ss_pred EEEEecCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEe
Confidence 999999999999999842 345888889999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccc---------------------------------------------cccccccccccccCCCcccCCC
Q 002857 318 DFGIARFLEATNE---------------------------------------------QTSSIGVKGTTGYIAPEYGMGH 352 (873)
Q Consensus 318 DFGla~~~~~~~~---------------------------------------------~~~~~~~~Gt~~Y~APE~l~~~ 352 (873)
|||+++.+..... ........||..|+|||++.+.
T Consensus 144 DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 223 (381)
T cd05626 144 DFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK 223 (381)
T ss_pred eCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCC
Confidence 9999764311000 0001234699999999999988
Q ss_pred CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 353 ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 353 ~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
.++.++|||||||++|||+||+.||..
T Consensus 224 ~~~~~~DiwSlG~il~elltG~~Pf~~ 250 (381)
T cd05626 224 GYTQLCDWWSVGVILFEMLVGQPPFLA 250 (381)
T ss_pred CCCCccceeehhhHHHHHHhCCCCCcC
Confidence 999999999999999999999999975
No 120
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4.3e-35 Score=311.51 Aligned_cols=247 Identities=25% Similarity=0.390 Sum_probs=192.4
Q ss_pred eecccCceEEEEEEE--cCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEe
Q 002857 167 LIGAGNFASVYKGIL--FEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 167 ~LG~G~fG~VYkg~~--~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
.||+|+||.||+|.+ ..++..||+|+++.... ...+.+.+|+.++++++|+||+++++++. .+..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------~~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE------AESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc------CCCcEEEEe
Confidence 689999999999975 34678999999864432 23467899999999999999999999852 345789999
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccc
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIA 322 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla 322 (873)
|+++|+|.+++.. ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~ 142 (257)
T cd05116 76 LAELGPLNKFLQK----------NKHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLS 142 (257)
T ss_pred cCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccc
Confidence 9999999999842 346889999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccc-cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhHH
Q 002857 323 RFLEATNEQT-SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERVE 400 (873)
Q Consensus 323 ~~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l~ 400 (873)
+......... ......++..|+|||.+....++.++||||||+++|||+| |+.||...... ...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~------------ 208 (257)
T cd05116 143 KALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVT------------ 208 (257)
T ss_pred cccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHH------------
Confidence 8664332211 1112234578999999988889999999999999999998 99999753211 111
Q ss_pred HHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 401 EIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 401 elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
+.+...... ..|. .+...+.+++.+||+.||++||++.+|.+.|+.
T Consensus 209 ~~i~~~~~~------------~~~~---------~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 209 QMIESGERM------------ECPQ---------RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHCCCCC------------CCCC---------CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 111110000 0000 112357899999999999999999999999975
No 121
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=5.2e-35 Score=318.34 Aligned_cols=268 Identities=25% Similarity=0.406 Sum_probs=201.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCc--EEEEEEeeccC-CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAP--AVAIKVFNFLH-HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~--~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~ 235 (873)
++|++.+.||+|+||.||+|.+..++. .+++|.++... ....+.+.+|++++.++ +||||+++++++ ....
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGAC-----ENRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEE-----ccCC
Confidence 578899999999999999998876654 47888887432 23346789999999999 799999999986 3455
Q ss_pred eEEEEEeecCCCChhhhccccccccc------ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDK------RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~------~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
..++||||+++|+|.++++....... .......+++..++.|+.||+.||+||| +.+|+||||||+|||++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEEC
Confidence 78999999999999999954111000 0112245889999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhH
Q 002857 310 DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 310 ~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~ 388 (873)
+++.+||+|||++....... .......+..|+|||++.+..++.++|||||||++|||+| |..||....... ..
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~--~~ 228 (297)
T cd05089 154 ENLASKIADFGLSRGEEVYV---KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE--LY 228 (297)
T ss_pred CCCeEEECCcCCCcccccee---ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HH
Confidence 99999999999986432111 1111123567999999988889999999999999999998 999986532111 00
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
..+ ...+... .+ ..+...+.+|+.+||+.+|.+|||+.+|++.|+.+
T Consensus 229 -----------~~~-~~~~~~~------------~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 275 (297)
T cd05089 229 -----------EKL-PQGYRME------------KP---------RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM 275 (297)
T ss_pred -----------HHH-hcCCCCC------------CC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 000 0000000 00 01123477899999999999999999999999988
Q ss_pred HHhhh
Q 002857 469 KKKLL 473 (873)
Q Consensus 469 ~~~l~ 473 (873)
..+..
T Consensus 276 ~~~~~ 280 (297)
T cd05089 276 LEARK 280 (297)
T ss_pred HHhhc
Confidence 76553
No 122
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-36 Score=305.99 Aligned_cols=272 Identities=23% Similarity=0.259 Sum_probs=215.7
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
..++|.+.+.||+|||+.||+++...++..+|+|++.....+..+..++|++..++++||||+++++++....-....+.
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 45789999999999999999999888999999999987777778899999999999999999999998765444456679
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
||+++|...|||.+.+.. .......+++.+.+.|+.+|.+||++||.. ..+++||||||.|||+.+++.++|.
T Consensus 99 yll~Pyy~~Gsl~d~i~~------~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~ 171 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIER------LKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLM 171 (302)
T ss_pred EEEeehhccccHHHHHHH------HhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEE
Confidence 999999999999999953 113345799999999999999999999932 4459999999999999999999999
Q ss_pred ccccccccccccc-------cccccccccccccCCCcccC---CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhh
Q 002857 318 DFGIARFLEATNE-------QTSSIGVKGTTGYIAPEYGM---GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNL 387 (873)
Q Consensus 318 DFGla~~~~~~~~-------~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l 387 (873)
|||.+....-... .........|..|+|||.+. +...++++|||||||+||+|+.|..||+.....+.++
T Consensus 172 D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSl 251 (302)
T KOG2345|consen 172 DLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSL 251 (302)
T ss_pred eccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeE
Confidence 9999875432111 01122345799999999875 4467999999999999999999999998765544332
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
.-.+.. ..+. .|.... ..+.+.+++.+|++.||.+||++.+++..++.
T Consensus 252 aLAv~n-----------~q~s--------------~P~~~~-------yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~ 299 (302)
T KOG2345|consen 252 ALAVQN-----------AQIS--------------IPNSSR-------YSEALHQLIKSMLQVDPNQRPTIPELLSKLDD 299 (302)
T ss_pred EEeeec-----------cccc--------------cCCCCC-------ccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence 221110 0000 011000 13458899999999999999999999999886
Q ss_pred H
Q 002857 468 I 468 (873)
Q Consensus 468 i 468 (873)
+
T Consensus 300 L 300 (302)
T KOG2345|consen 300 L 300 (302)
T ss_pred h
Confidence 5
No 123
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.9e-35 Score=321.82 Aligned_cols=269 Identities=22% Similarity=0.347 Sum_probs=202.2
Q ss_pred cCCCcceeecccCceEEEEEEEcC-------CCcEEEEEEeeccC-CcchhHHHHHHHHHHhh-hhccceeeeeeeeccc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE-------GAPAVAIKVFNFLH-HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVD 230 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~-------~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~ 230 (873)
++|.+.+.||+|+||.||+|.+.. ....+|+|+++... ......+..|+++++++ +|+||++++++|.
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~--- 94 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT--- 94 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe---
Confidence 578999999999999999998643 23479999987532 23345788899999999 7999999999963
Q ss_pred ccCCceEEEEEeecCCCChhhhccccccccc------ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCC
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEEDK------RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPS 304 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~------~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKps 304 (873)
.....++||||+++|+|.+++........ .......+++.+++.++.|++.||+||| +.+++||||||+
T Consensus 95 --~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~ 169 (307)
T cd05098 95 --QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAAR 169 (307)
T ss_pred --cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHH
Confidence 45578999999999999999964111000 0012245889999999999999999999 899999999999
Q ss_pred CeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCccccc
Q 002857 305 NILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKD 383 (873)
Q Consensus 305 NILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~ 383 (873)
|||++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.....+
T Consensus 170 Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~ 249 (307)
T cd05098 170 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 249 (307)
T ss_pred heEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence 99999999999999999976543221111122234568999999998889999999999999999998 88888542111
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+.+.+....... .+ ..+...+.+++.+||+.+|++||||.+|++
T Consensus 250 --------------~~~~~~~~~~~~~------------~~---------~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 250 --------------ELFKLLKEGHRMD------------KP---------SNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred --------------HHHHHHHcCCCCC------------CC---------CcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 0111111000000 00 011235778999999999999999999999
Q ss_pred HHHHHHHh
Q 002857 464 GLRLIKKK 471 (873)
Q Consensus 464 ~Le~i~~~ 471 (873)
.|+.+...
T Consensus 295 ~l~~~~~~ 302 (307)
T cd05098 295 DLDRILAL 302 (307)
T ss_pred HHHHHHHH
Confidence 99998664
No 124
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.1e-35 Score=320.94 Aligned_cols=269 Identities=21% Similarity=0.331 Sum_probs=202.8
Q ss_pred hcCCCcceeecccCceEEEEEEEc-------CCCcEEEEEEeeccC-CcchhHHHHHHHHHHhh-hhccceeeeeeeecc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILF-------EGAPAVAIKVFNFLH-HDASKSFTVECEVMRNI-IHRKIIKVVTACSRV 229 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~-------~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~ 229 (873)
.++|.+.+.||+|+||.||+|++. ..+..||+|.++... ......+.+|+.+++.+ +|+||+++++++
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~--- 90 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--- 90 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEE---
Confidence 457888999999999999999753 134579999986432 23346789999999999 899999999986
Q ss_pred cccCCceEEEEEeecCCCChhhhccccccccc------ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCC
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEEDK------RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKP 303 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~------~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKp 303 (873)
......++||||+++|+|.+++........ .......+++.+++.++.||+.||.||| +.+|+||||||
T Consensus 91 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp 165 (304)
T cd05101 91 --TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAA 165 (304)
T ss_pred --ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeeccccc
Confidence 345678999999999999999964111000 0012346888999999999999999999 89999999999
Q ss_pred CCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccc
Q 002857 304 SNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFK 382 (873)
Q Consensus 304 sNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~ 382 (873)
+|||+++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 166 ~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 245 (304)
T cd05101 166 RNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 245 (304)
T ss_pred ceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH
Confidence 999999999999999999986644332222222345678999999998889999999999999999998 7888754211
Q ss_pred cchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 383 DNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 383 ~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
. .+ .+.+..... +.. ...+...+.+++.+||+.+|++|||+.||+
T Consensus 246 ~-----~~---------~~~~~~~~~---------------~~~------~~~~~~~~~~li~~cl~~~p~~Rps~~e~l 290 (304)
T cd05101 246 E-----EL---------FKLLKEGHR---------------MDK------PANCTNELYMMMRDCWHAIPSHRPTFKQLV 290 (304)
T ss_pred H-----HH---------HHHHHcCCc---------------CCC------CCCCCHHHHHHHHHHcccChhhCCCHHHHH
Confidence 1 10 000000000 000 001234578899999999999999999999
Q ss_pred HHHHHHHH
Q 002857 463 LGLRLIKK 470 (873)
Q Consensus 463 ~~Le~i~~ 470 (873)
+.|+++..
T Consensus 291 ~~l~~~~~ 298 (304)
T cd05101 291 EDLDRILT 298 (304)
T ss_pred HHHHHHHH
Confidence 99998755
No 125
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.4e-35 Score=310.99 Aligned_cols=253 Identities=27% Similarity=0.432 Sum_probs=197.4
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
++|++.++||+|+||.||+|.+. ++..||+|.++.... ..+.+.+|+.++++++|+|++++++++. ....++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~l 77 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS------EEPIYI 77 (260)
T ss_pred HHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC------CCCcEE
Confidence 46888999999999999999774 566799999875433 3467999999999999999999998842 345789
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++++|.++++. .....+++.+++.++.|++.||+||| +.+|+|+||||+||++++++.++|+||
T Consensus 78 v~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~df 146 (260)
T cd05070 78 VTEYMSKGSLLDFLKD--------GEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADF 146 (260)
T ss_pred EEEecCCCcHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCc
Confidence 9999999999999853 22345889999999999999999999 889999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
|++..+..... .......++..|+|||++.+..++.++||||||+++|||++ |..||...... .....
T Consensus 147 g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~-------- 215 (260)
T cd05070 147 GLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQ-------- 215 (260)
T ss_pred eeeeeccCccc-ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHHH--------
Confidence 99986543221 11112235678999999988889999999999999999999 88898652111 01110
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
+ ..... .+.. ......+.+++.+||+.+|++|||+.++.+.|+.
T Consensus 216 ---~-~~~~~--------------~~~~-------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 216 ---V-ERGYR--------------MPCP-------QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---H-HcCCC--------------CCCC-------CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0 00000 0000 0112357899999999999999999999998874
No 126
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=5.1e-35 Score=339.76 Aligned_cols=204 Identities=22% Similarity=0.338 Sum_probs=168.4
Q ss_pred HHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhc------cceeeeeee
Q 002857 153 EALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHR------KIIKVVTAC 226 (873)
Q Consensus 153 ~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~Hp------NIV~llg~c 226 (873)
+++...+++|++.++||+|+||+||+|.+..+++.||||+++... .....+..|+++++.++|. +++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 445556789999999999999999999998889999999986432 2234567788888888665 478888876
Q ss_pred ecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCC
Q 002857 227 SRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCK-PPIAHCDIKPSN 305 (873)
Q Consensus 227 ~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s-~gIvHrDLKpsN 305 (873)
. ....+.++|||++ +++|.+++.. ...+++..+..|+.||+.||+||| . .+||||||||+|
T Consensus 201 ~----~~~~~~~iv~~~~-g~~l~~~l~~----------~~~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~N 262 (467)
T PTZ00284 201 Q----NETGHMCIVMPKY-GPCLLDWIMK----------HGPFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPEN 262 (467)
T ss_pred E----cCCceEEEEEecc-CCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHH
Confidence 3 2345789999988 7789888842 346899999999999999999999 6 599999999999
Q ss_pred eeeCCCC----------------CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHH
Q 002857 306 ILLNDEM----------------TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLE 369 (873)
Q Consensus 306 ILLd~~~----------------~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~E 369 (873)
||++.++ .+||+|||.+..... ......||..|+|||++.+..++.++|||||||++||
T Consensus 263 ILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~e 337 (467)
T PTZ00284 263 ILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYE 337 (467)
T ss_pred EEEecCCcccccccccccCCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHH
Confidence 9998665 499999998864221 1234568999999999999999999999999999999
Q ss_pred HHhCCCCCCcc
Q 002857 370 MFTGLRPSDDM 380 (873)
Q Consensus 370 LlTGk~Pf~~~ 380 (873)
|++|+.||+..
T Consensus 338 lltG~~pf~~~ 348 (467)
T PTZ00284 338 LYTGKLLYDTH 348 (467)
T ss_pred HHhCCCCCCCC
Confidence 99999999763
No 127
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4.2e-35 Score=318.53 Aligned_cols=271 Identities=21% Similarity=0.294 Sum_probs=197.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCC--------------CcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeee
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEG--------------APAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVT 224 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~--------------g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg 224 (873)
++|++.+.||+|+||.||+++.... ...||+|.++... ......|.+|++++++++|+||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 5788999999999999999976432 2358999987432 223457899999999999999999999
Q ss_pred eeecccccCCceEEEEEeecCCCChhhhcccccccc--cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCC
Q 002857 225 ACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEED--KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIK 302 (873)
Q Consensus 225 ~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~--~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLK 302 (873)
++ ......++||||+++++|.+++....... ........+++..++.++.|++.||+||| +.+++|+|||
T Consensus 85 ~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlk 156 (295)
T cd05097 85 VC-----VSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLA 156 (295)
T ss_pred EE-----cCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccC
Confidence 96 34567899999999999999985311000 00011234788899999999999999999 8999999999
Q ss_pred CCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh--CCCCCCcc
Q 002857 303 PSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT--GLRPSDDM 380 (873)
Q Consensus 303 psNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT--Gk~Pf~~~ 380 (873)
|+||++++++.+||+|||++................++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 157 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~ 236 (295)
T cd05097 157 TRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLL 236 (295)
T ss_pred hhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCccc
Confidence 9999999999999999999976543222112222345778999999988899999999999999999998 56677542
Q ss_pred cccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHH
Q 002857 381 FKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIND 460 (873)
Q Consensus 381 ~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~E 460 (873)
..+. ..... .+..+...... ....+. ..+..+.+|+.+||+.+|++||++.+
T Consensus 237 ~~~~--~~~~~--------~~~~~~~~~~~---------~~~~~~---------~~~~~l~~li~~~l~~~p~~RPs~~~ 288 (295)
T cd05097 237 SDEQ--VIENT--------GEFFRNQGRQI---------YLSQTP---------LCPSPVFKLMMRCWSRDIKDRPTFNK 288 (295)
T ss_pred ChHH--HHHHH--------HHhhhhccccc---------cCCCCC---------CCCHHHHHHHHHHcCCCchhCcCHHH
Confidence 2111 00000 00000000000 000000 01235889999999999999999999
Q ss_pred HHHHHH
Q 002857 461 VELGLR 466 (873)
Q Consensus 461 Vl~~Le 466 (873)
|++.|+
T Consensus 289 i~~~l~ 294 (295)
T cd05097 289 IHHFLR 294 (295)
T ss_pred HHHHHh
Confidence 999886
No 128
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.2e-35 Score=320.17 Aligned_cols=277 Identities=18% Similarity=0.244 Sum_probs=197.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
++|.+.+.||+|+||.||+|++..+++.||+|.++.... .....+.+|++++++++|+||+++++++ ..++..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIV-----HTDKSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEE-----eeCCeEE
Confidence 578899999999999999999988899999999874432 2335678899999999999999999986 3456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++ +|.+++.. ....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 81 lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~D 147 (309)
T cd07872 81 LVFEYLDK-DLKQYMDD---------CGNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLAD 147 (309)
T ss_pred EEEeCCCC-CHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECc
Confidence 99999975 88887742 2345788899999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||+++....... ......++..|+|||++.+ ..++.++||||||+++|||+||+.||....... ....+...+..
T Consensus 148 fg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~--~~~~~~~~~~~ 223 (309)
T cd07872 148 FGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED--ELHLIFRLLGT 223 (309)
T ss_pred cccceecCCCcc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCC
Confidence 999975432221 1123357899999998765 468899999999999999999999997532211 11111111111
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCC-chhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSS-STQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~-~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
...+......... ........... .............+.+++.+||+.||.+|||+.|+++
T Consensus 224 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 224 PTEETWPGISSND-----EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred CCHHHHhhhcchh-----hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000000000000 00000000000 0000001112335778999999999999999999876
No 129
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3e-35 Score=313.19 Aligned_cols=252 Identities=25% Similarity=0.373 Sum_probs=195.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
++|.+.+.||+|+||.||+|.+. ++..||||.+.... .....+.+|+.++++++||||+++++++. .....++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCT-----KQRPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEc-----cCCCcEE
Confidence 45788899999999999999874 45569999887433 23467999999999999999999999963 3456799
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+.+|+|.+++.. ....+++..++.++.||+.||+||| +.+|+|+||||+||+++.++.+||+||
T Consensus 77 v~e~~~~~~l~~~i~~---------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~ 144 (256)
T cd05113 77 VTEYMSNGCLLNYLRE---------HGKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDF 144 (256)
T ss_pred EEEcCCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCC
Confidence 9999999999999842 2236899999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
|.++....... .......++..|+|||++.+..++.++||||||+++|||+| |+.||.......
T Consensus 145 g~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-------------- 209 (256)
T cd05113 145 GLSRYVLDDEY-TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE-------------- 209 (256)
T ss_pred ccceecCCCce-eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--------------
Confidence 99986533221 11222335678999999988889999999999999999999 999986422110
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
+.+....... .+.... ....+.+++.+||+.+|.+||++.+|+..|+
T Consensus 210 ---~~~~~~~~~~-----------~~~~~~-------~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 210 ---TVEKVSQGLR-----------LYRPHL-------ASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ---HHHHHhcCCC-----------CCCCCC-------CCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0010000000 000000 1235788999999999999999999998764
No 130
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5.5e-36 Score=331.12 Aligned_cols=202 Identities=26% Similarity=0.299 Sum_probs=173.4
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||++....+++.||+|+++... ....+.+.+|+.+++.++|+||+++++++ .....
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~-----~~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF-----QDKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCe
Confidence 47899999999999999999999999999999997432 23445688999999999999999999885 45667
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||+++|+|.+++.. ....+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~---------~~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL 143 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNR---------YEDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKL 143 (330)
T ss_pred EEEEECCCCCCCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEe
Confidence 9999999999999999853 2356889999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccC------CCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM------GHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~------~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|||++..+...... ......||..|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 144 ~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 211 (330)
T cd05601 144 ADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHE 211 (330)
T ss_pred ccCCCCeECCCCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCC
Confidence 999999866433221 222346899999999986 45678999999999999999999999965
No 131
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.3e-35 Score=311.32 Aligned_cols=250 Identities=27% Similarity=0.380 Sum_probs=194.8
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
+|++.+.||+|+||.||+|.+. ++..+|+|++..... ....+.+|++++++++|+||+++++++ ......++|
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv 77 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVC-----TKQRPIFIV 77 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEE-----cCCCceEEE
Confidence 5778899999999999999875 566899999864322 335788999999999999999999985 445678999
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccc
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFG 320 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFG 320 (873)
|||+++++|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+||++++++.+||+|||
T Consensus 78 ~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg 145 (256)
T cd05059 78 TEYMANGCLLNYLRE---------RKGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFG 145 (256)
T ss_pred EecCCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcc
Confidence 999999999999852 2336899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhH
Q 002857 321 IARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 321 la~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
+++....... .......++..|+|||++.+..++.++||||||+++|||++ |+.||....... ....
T Consensus 146 ~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~--------- 213 (256)
T cd05059 146 LARYVLDDQY-TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--VVES--------- 213 (256)
T ss_pred cceecccccc-cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--HHHH---------
Confidence 9986532211 11112224567999999999999999999999999999999 899986521110 0000
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
+..... .+... .+...+.+++.+||+.+|++|||+.||++.|
T Consensus 214 ---~~~~~~--------------~~~~~-------~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 214 ---VSAGYR--------------LYRPK-------LAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---HHcCCc--------------CCCCC-------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 000000 00000 0133588999999999999999999999876
No 132
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.9e-35 Score=313.61 Aligned_cols=256 Identities=26% Similarity=0.438 Sum_probs=199.2
Q ss_pred CCCcceeecccCceEEEEEEEcCCCc---EEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAP---AVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~---~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
+|++.+.||+|+||.||+|.+..+++ .||||+++... ......|..|+.++++++||||+++++++ ..+..
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~~ 79 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKSRP 79 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEE-----CCCCc
Confidence 57788999999999999999876554 69999987542 33346899999999999999999999985 45667
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ....+++.+++.++.|++.||.||| +.+++|+||||+||+++.++.+||
T Consensus 80 ~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl 147 (269)
T cd05065 80 VMIITEFMENGALDSFLRQ---------NDGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKV 147 (269)
T ss_pred eEEEEecCCCCcHHHHHhh---------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEE
Confidence 8999999999999999853 2346899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccc-c--ccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHh
Q 002857 317 ADFGIARFLEATNEQTSSIG-V--KGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~-~--~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~ 392 (873)
+|||+++............. . ..+..|+|||++.+..++.++||||||+++|||++ |..||...... ....++.
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i~ 225 (269)
T cd05065 148 SDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAIE 225 (269)
T ss_pred CCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHHH
Confidence 99999986543222111111 1 12457999999999999999999999999999987 99998653211 1111110
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
. .. ..|.. .+++..+.+++..||+.+|++||++.+|+.+|+.+
T Consensus 226 ~------------~~--------------~~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 226 Q------------DY--------------RLPPP-------MDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred c------------CC--------------cCCCc-------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 00 00000 11233477899999999999999999999998864
No 133
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.1e-35 Score=317.53 Aligned_cols=272 Identities=21% Similarity=0.308 Sum_probs=201.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCC----------------cEEEEEEeeccCC-cchhHHHHHHHHHHhhhhcccee
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGA----------------PAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIK 221 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g----------------~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~ 221 (873)
.++|++.+.||+|+||.||+|.+...+ ..||+|.+..... ...+.+.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 357899999999999999999875432 4689999875432 34567899999999999999999
Q ss_pred eeeeeecccccCCceEEEEEeecCCCChhhhcccccccccc-cCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeecc
Q 002857 222 VVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKR-HKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCD 300 (873)
Q Consensus 222 llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~-~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrD 300 (873)
+++++ ..++..++||||+++++|.+++......... ......+++..++.++.|++.||+||| +.+|+|+|
T Consensus 84 ~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~d 155 (296)
T cd05051 84 LLGVC-----TVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRD 155 (296)
T ss_pred EEEEE-----ecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccc
Confidence 99986 3446789999999999999998542110000 112346899999999999999999999 89999999
Q ss_pred CCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh--CCCCCC
Q 002857 301 IKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT--GLRPSD 378 (873)
Q Consensus 301 LKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT--Gk~Pf~ 378 (873)
|||+||+++.++.++|+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999986543322222223446788999999988889999999999999999998 677775
Q ss_pred cccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCH
Q 002857 379 DMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKI 458 (873)
Q Consensus 379 ~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm 458 (873)
...... ... .+.. .+... . .......+ ..+...+.+++.+||+.+|++|||+
T Consensus 236 ~~~~~~--~~~-----------~~~~-~~~~~-~----~~~~~~~~---------~~~~~~l~~li~~cl~~~p~~Rpt~ 287 (296)
T cd05051 236 HLTDQQ--VIE-----------NAGH-FFRDD-G----RQIYLPRP---------PNCPKDIYELMLECWRRDEEDRPTF 287 (296)
T ss_pred CcChHH--HHH-----------HHHh-ccccc-c----ccccCCCc---------cCCCHHHHHHHHHHhccChhcCCCH
Confidence 422111 000 0000 00000 0 00000000 0112358899999999999999999
Q ss_pred HHHHHHHH
Q 002857 459 NDVELGLR 466 (873)
Q Consensus 459 ~EVl~~Le 466 (873)
.||++.|+
T Consensus 288 ~el~~~L~ 295 (296)
T cd05051 288 REIHLFLQ 295 (296)
T ss_pred HHHHHHhc
Confidence 99998885
No 134
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=8.2e-35 Score=308.52 Aligned_cols=251 Identities=26% Similarity=0.424 Sum_probs=200.3
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.+.||.|+||.||+|.. .++.||+|.++.... ..+.+.+|+.++++++|+||+++++++ ......+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVV-----LQGNPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEE-----cCCCCeE
Confidence 35788899999999999999987 478899999975544 457899999999999999999999985 3366789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. .....+++..++.++.|++.||.||| ..+|+|+||||+||+++.++.+||+|
T Consensus 77 ~v~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d 145 (256)
T cd05039 77 IVTEYMAKGSLVDYLRS--------RGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSD 145 (256)
T ss_pred EEEEecCCCcHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcc
Confidence 99999999999999853 22236899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||.++....... ....+..|+|||++....++.++||||||+++|||++ |..||.......
T Consensus 146 ~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------------- 207 (256)
T cd05039 146 FGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD------------- 207 (256)
T ss_pred cccccccccccc-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-------------
Confidence 999986632211 2235678999999988899999999999999999997 999986421111
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
+.+.+...... ..+ ......+.+++.+||+.+|++|||+.||+++|+.+
T Consensus 208 -~~~~~~~~~~~------------~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 208 -VVPHVEKGYRM------------EAP---------EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred -HHHHHhcCCCC------------CCc---------cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 00100000000 000 01123578899999999999999999999999753
No 135
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.1e-35 Score=326.14 Aligned_cols=199 Identities=26% Similarity=0.309 Sum_probs=169.2
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhc-cceeeeeeeecccccCCce
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHR-KIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~Hp-NIV~llg~c~~~~~~~~~~ 236 (873)
+|++.+.||+|+||.||+|++..+++.||||+++.. .....+.+..|++++..+.|+ +|+++++++ ...+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcCCE
Confidence 578899999999999999999888999999998743 223446788899999999765 577787774 45667
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~----------~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL 142 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQ----------VGKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKI 142 (324)
T ss_pred EEEEEcCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEE
Confidence 9999999999999998842 345888999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|||+++...... .......||..|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 143 ~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (324)
T cd05587 143 ADFGMCKENIFGG--KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 203 (324)
T ss_pred eecCcceecCCCC--CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 9999987432211 122234689999999999999999999999999999999999999975
No 136
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.3e-35 Score=331.34 Aligned_cols=202 Identities=24% Similarity=0.354 Sum_probs=173.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||+||+|....+++.||||+++... ......+..|+.++.+++|+||+++++.+ .+...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCCe
Confidence 47899999999999999999998899999999997432 22335688899999999999999999985 45678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||+++|+|.+++. ....+++..+..++.||+.||+||| +.+|+||||||+|||++.++++||
T Consensus 76 ~~lv~E~~~gg~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL 142 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLM----------KKDTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKL 142 (363)
T ss_pred EEEEEcCCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEE
Confidence 999999999999999984 2456899999999999999999999 899999999999999999999999
Q ss_pred ecccccccccccccc---------------------------------ccccccccccccCCCcccCCCCCCcchhhHhH
Q 002857 317 ADFGIARFLEATNEQ---------------------------------TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSF 363 (873)
Q Consensus 317 sDFGla~~~~~~~~~---------------------------------~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSf 363 (873)
+|||+++.+...... .......||..|+|||++.+..++.++|||||
T Consensus 143 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSl 222 (363)
T cd05628 143 SDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSL 222 (363)
T ss_pred eeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhh
Confidence 999999754321100 00123469999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCc
Q 002857 364 GILLLEMFTGLRPSDD 379 (873)
Q Consensus 364 GvvL~ELlTGk~Pf~~ 379 (873)
||++|||++|+.||..
T Consensus 223 Gvil~ell~G~~Pf~~ 238 (363)
T cd05628 223 GVIMYEMLIGYPPFCS 238 (363)
T ss_pred HHHHHHHHhCCCCCCC
Confidence 9999999999999975
No 137
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6e-35 Score=311.99 Aligned_cols=257 Identities=23% Similarity=0.302 Sum_probs=198.9
Q ss_pred HHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 155 LYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 155 l~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
++.+++++.....||+|+||.||+|++..++..||+|.+........+.+.+|+.++++++|+||+++++++ ..+
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 77 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD-----SEN 77 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeee-----ccC
Confidence 455677788888999999999999999888999999998765555567899999999999999999999986 345
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCC--chhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC-C
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNL--NSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND-E 311 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~L--s~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~-~ 311 (873)
+..++|+||+++++|.+++.. ....+ ++..+..++.||+.||+||| +.+|+||||||+||+++. +
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~ 145 (268)
T cd06624 78 GFFKIFMEQVPGGSLSALLRS---------KWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYS 145 (268)
T ss_pred CEEEEEEecCCCCCHHHHHHH---------hcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCC
Confidence 678999999999999999853 11223 77888999999999999999 899999999999999986 6
Q ss_pred CCeEEeccccccccccccccccccccccccccCCCcccCCC--CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHH
Q 002857 312 MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH--ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQN 389 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~ 389 (873)
+.++|+|||++........ ......++..|+|||++.+. .++.++||||||+++|+|++|+.||......... .
T Consensus 146 ~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~--~ 221 (268)
T cd06624 146 GVVKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA--M 221 (268)
T ss_pred CeEEEecchhheecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh--H
Confidence 7999999999976533221 11223478999999998664 3788999999999999999999998642111100 0
Q ss_pred HHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 390 WVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 390 ~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+ ...... ..+... ......+.+++.+||+.+|++|||+.||++
T Consensus 222 ~-------------~~~~~~------------~~~~~~------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 222 F-------------KVGMFK------------IHPEIP------ESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred h-------------hhhhhc------------cCCCCC------cccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 0 000000 000000 011234778999999999999999999875
No 138
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.4e-35 Score=327.01 Aligned_cols=194 Identities=26% Similarity=0.326 Sum_probs=166.3
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
++||+|+||.||+|++..+++.||||+++.. .......+..|++++..+ +||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF-----QTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCeEEEEE
Confidence 4699999999999999888999999998743 223345677899999876 799999999985 4566799999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|..++. ....+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 76 E~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~ 142 (321)
T cd05591 76 EYVNGGDLMFQIQ----------RSRKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGM 142 (321)
T ss_pred eCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeeccc
Confidence 9999999998884 2346888999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
++...... .......||..|+|||++.+..++.++||||||+++|||+||+.||..
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~ 198 (321)
T cd05591 143 CKEGILNG--VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEA 198 (321)
T ss_pred ceecccCC--ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCC
Confidence 87542221 122234689999999999998999999999999999999999999975
No 139
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=7.3e-35 Score=307.20 Aligned_cols=257 Identities=26% Similarity=0.420 Sum_probs=200.3
Q ss_pred eeecccCceEEEEEEEcCC---CcEEEEEEeeccCCcc-hhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEG---APAVAIKVFNFLHHDA-SKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~---g~~VAVK~l~~~~~~~-~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.||+|+||.||+|.+... +..||+|+++...... .+.+.+|+++++.++|+||+++++++ ......++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVC-----TEEEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeee-----cCCCceEEEE
Confidence 4699999999999999765 8899999997554433 57899999999999999999999986 3466789999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++++|.+++....... .......+++..++.++.|++.||+||| +.+|+|+||||+||+++.++.+||+|||.
T Consensus 76 e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~ 151 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVF-PSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGL 151 (262)
T ss_pred EeccCCcHHHHHhhccccc-cccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccc
Confidence 9999999999995310000 0011367899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhHH
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERVE 400 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l~ 400 (873)
+................++..|+|||.+....++.++||||||+++|||++ |..||...... .+. .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~-----------~ 218 (262)
T cd00192 152 SRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE--EVL-----------E 218 (262)
T ss_pred ccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH--HHH-----------H
Confidence 987654432222334457889999999988889999999999999999999 69998763111 010 1
Q ss_pred HHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 401 EIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 401 elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
.+.+.... +. ...+...+.+++.+||+.+|++|||+.|++..|+
T Consensus 219 ~~~~~~~~---------------~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 219 YLRKGYRL---------------PK-------PEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHcCCCC---------------CC-------CccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11100000 00 0011335889999999999999999999998873
No 140
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.1e-35 Score=325.50 Aligned_cols=194 Identities=27% Similarity=0.372 Sum_probs=164.6
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.||+|+||.||+|++..+++.||||+++... ....+.+..|..++..+ +||||+++++++ ..+...++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 46999999999999998889999999987432 22334566677777654 899999999885 4566899999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 76 e~~~gg~L~~~~~~----------~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~ 142 (316)
T cd05592 76 EYLNGGDLMFHIQS----------SGRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGM 142 (316)
T ss_pred cCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcC
Confidence 99999999998842 346888999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
++...... .......||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 143 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~ 198 (316)
T cd05592 143 CKENMNGE--GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred CeECCCCC--CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCC
Confidence 97543222 222335689999999999999999999999999999999999999975
No 141
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=6.4e-35 Score=311.09 Aligned_cols=249 Identities=24% Similarity=0.355 Sum_probs=192.5
Q ss_pred eecccCceEEEEEEEc--CCCcEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEee
Q 002857 167 LIGAGNFASVYKGILF--EGAPAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEF 243 (873)
Q Consensus 167 ~LG~G~fG~VYkg~~~--~~g~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey 243 (873)
.||+|+||.||+|.+. .++..||+|++...... ..+.+.+|+.++++++|+||+++++++. ....++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~------~~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE------AEALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc------CCCeEEEEEe
Confidence 3899999999999875 34567999998754332 3356899999999999999999999862 3457999999
Q ss_pred cCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccc
Q 002857 244 MPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIAR 323 (873)
Q Consensus 244 ~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~ 323 (873)
+++|+|.+++.. ....+++..++.++.||+.||+||| +.+++||||||+|||++.++.+||+|||+++
T Consensus 76 ~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~ 143 (257)
T cd05115 76 ASGGPLNKFLSG---------KKDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSK 143 (257)
T ss_pred CCCCCHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccc
Confidence 999999999842 2456899999999999999999999 8999999999999999999999999999998
Q ss_pred cccccccccc-ccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhHHH
Q 002857 324 FLEATNEQTS-SIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERVEE 401 (873)
Q Consensus 324 ~~~~~~~~~~-~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l~e 401 (873)
.......... .....++..|+|||++.+..++.++||||||+++|||++ |..||....... .. .
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~------------~ 209 (257)
T cd05115 144 ALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE--VM------------S 209 (257)
T ss_pred cccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH--HH------------H
Confidence 6543322111 111223578999999988889999999999999999996 999987532111 11 1
Q ss_pred HhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 402 IVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 402 lid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
.+...... +.. ..+..++.+++.+||+.+|++||++.+|++.|+.+
T Consensus 210 ~~~~~~~~--------------~~~-------~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 210 FIEQGKRL--------------DCP-------AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHCCCCC--------------CCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 11100000 000 01133577899999999999999999999999864
No 142
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.1e-35 Score=325.99 Aligned_cols=204 Identities=24% Similarity=0.254 Sum_probs=170.1
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhhhhccceeeeeeeeccc-ccCC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVD-YQGN 234 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~-~~~~ 234 (873)
..++|++.+.||+|+||.||++.+..++..||||++... .......+.+|+.+++.++||||+++++++.... ....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999999888999999998643 2233467889999999999999999999864321 1122
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++ +|.+.++ ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~------------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~ 162 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH------------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 162 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh------------ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCE
Confidence 357999999965 6666552 23778888999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
||+|||+++...... ......+|..|+|||++.+..++.++||||||+++|||+||+.||...
T Consensus 163 kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 163 KILDFGLARTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred EEecCCCccccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 999999997543221 122346899999999999999999999999999999999999999753
No 143
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.7e-35 Score=310.45 Aligned_cols=253 Identities=24% Similarity=0.418 Sum_probs=191.0
Q ss_pred eeecccCceEEEEEEEcC---CCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFE---GAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~---~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.||+|+||.||+|.+.. ....||+|.+.... ....+.+.+|+.+++.++||||+++++++. ..+...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICL----PSEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEee----cCCCCcEEEE
Confidence 468999999999998753 34579999985332 234567889999999999999999999864 2345578999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+.+|+|.+++.. ....+++..++.++.||+.||+||| ..+|+||||||+|||+++++.+||+|||+
T Consensus 77 e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~ 144 (262)
T cd05058 77 PYMKHGDLRNFIRS---------ETHNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGL 144 (262)
T ss_pred ecCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccc
Confidence 99999999999853 2334677788999999999999999 89999999999999999999999999999
Q ss_pred ccccccccc--cccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhC-CCCCCcccccchhhHHHHhhcCchh
Q 002857 322 ARFLEATNE--QTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTG-LRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 322 a~~~~~~~~--~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTG-k~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
++....... ........++..|+|||++.+..++.++||||||+++|||++| ..||.... ...+...+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--~~~~~~~~------- 215 (262)
T cd05058 145 ARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--SFDITVYL------- 215 (262)
T ss_pred cccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHH-------
Confidence 975432211 1111223467789999999888999999999999999999995 55554321 11111100
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
.... ..+.. ...+..+.+++..||+.+|++||++.||+..|+.+.
T Consensus 216 --------~~~~-----------~~~~~-------~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 216 --------LQGR-----------RLLQP-------EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred --------hcCC-----------CCCCC-------CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 0000 00000 001235788999999999999999999999999874
No 144
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=6.6e-35 Score=310.29 Aligned_cols=254 Identities=25% Similarity=0.412 Sum_probs=199.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.++||+|+||.||+|.. .+++.||+|.+..... ....+.+|+.++++++|+||+++++++ ..+..+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~------~~~~~~ 76 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVV------TQEPIY 76 (260)
T ss_pred hHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEE------ccCCcE
Confidence 35788899999999999999986 4677899999874433 346789999999999999999999874 234589
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. .....+++.+++.++.|++.||+||| +.+++|+||||+||++++++.++|+|
T Consensus 77 ~v~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~d 145 (260)
T cd05067 77 IITEYMENGSLVDFLKT--------PEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIAD 145 (260)
T ss_pred EEEEcCCCCCHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEcc
Confidence 99999999999999853 23456889999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||++........ .......++..|+|||++.+..++.++||||||+++|||++ |+.||....... ...
T Consensus 146 fg~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~-------- 214 (260)
T cd05067 146 FGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE--VIQ-------- 214 (260)
T ss_pred CcceeecCCCCc-ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH--HHH--------
Confidence 999986542221 11122345778999999988889999999999999999999 999996532110 000
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
.+..... .+.. .....++.+++.+||+.+|++|||+++|+..|+.
T Consensus 215 ----~~~~~~~--------------~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 215 ----NLERGYR--------------MPRP-------DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ----HHHcCCC--------------CCCC-------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 0000000 0000 0012358889999999999999999999999874
No 145
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.6e-35 Score=316.15 Aligned_cols=273 Identities=23% Similarity=0.372 Sum_probs=201.5
Q ss_pred cCCCcceeecccCceEEEEEEE----cCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGIL----FEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~----~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
+.|++.+.||+|+||.||++.+ ..++..||+|.++... ......+.+|++++++++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 80 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGG 80 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEec---CCC
Confidence 3568889999999999999975 3467889999987443 2334679999999999999999999998743 224
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++++|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~---------~~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~ 148 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPR---------NKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQV 148 (284)
T ss_pred CceEEEEEccCCCCHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCE
Confidence 568999999999999999842 2345899999999999999999999 8999999999999999999999
Q ss_pred EEecccccccccccccc-ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+++.+...... .......++..|+|||++.+..++.++||||||+++|||+|++.|+....... ......
T Consensus 149 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~---~~~~~~ 225 (284)
T cd05079 149 KIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLF---LKMIGP 225 (284)
T ss_pred EECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchh---hhhccc
Confidence 99999999866433221 11122346778999999988889999999999999999999887653311100 000000
Q ss_pred cCch-hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 394 ALPE-RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 394 ~~~~-~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
...+ .....+... ......+.. ..+...+.+|+.+||+.+|++|||+.+|++.|+.+
T Consensus 226 ~~~~~~~~~~~~~~-----------~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 226 THGQMTVTRLVRVL-----------EEGKRLPRP-------PNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ccccccHHHHHHHH-----------HcCccCCCC-------CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000 011111000 000000100 01234588999999999999999999999999875
No 146
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.2e-35 Score=327.62 Aligned_cols=252 Identities=21% Similarity=0.354 Sum_probs=207.5
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
..++|++++.||+|+||.||+|+-+.+|..+|+|++++.. ....+.+..|-.+|...+++.||+|+-. |++.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs-----FQD~ 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS-----FQDK 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE-----ecCC
Confidence 4578999999999999999999999999999999998543 3445678889999999999999999987 5888
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
+.+||||||++||++..+|. ....|++.....++.+++.|+..|| ..|+|||||||+|+|||..|++
T Consensus 214 ~~LYLiMEylPGGD~mTLL~----------~~~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHi 280 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLM----------RKDTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHI 280 (550)
T ss_pred CeeEEEEEecCCccHHHHHH----------hcCcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCE
Confidence 99999999999999999993 5678999999999999999999999 9999999999999999999999
Q ss_pred EEecccccccccccc---------------------ccc------------------------cccccccccccCCCccc
Q 002857 315 CVADFGIARFLEATN---------------------EQT------------------------SSIGVKGTTGYIAPEYG 349 (873)
Q Consensus 315 KLsDFGla~~~~~~~---------------------~~~------------------------~~~~~~Gt~~Y~APE~l 349 (873)
||+|||++.-+.... ... .....+||+.|||||++
T Consensus 281 KLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVl 360 (550)
T KOG0605|consen 281 KLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVL 360 (550)
T ss_pred eeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHH
Confidence 999999985332100 000 01135699999999999
Q ss_pred CCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccc--hhhHHHHhhc-------CchhHHHHhhhhhhhhhhHHHH---H
Q 002857 350 MGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDN--LNLQNWVQSA-------LPERVEEIVDTLFFKEIEEEET---V 417 (873)
Q Consensus 350 ~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~--~~l~~~~~~~-------~~~~l~elid~~L~~~~~~r~~---~ 417 (873)
.+..|+..+|.||+|||+||||.|-+||....... ..+..|-... ......+++...+. ++..|.. +
T Consensus 361 l~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~ 439 (550)
T KOG0605|consen 361 LGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGA 439 (550)
T ss_pred hcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccH
Confidence 99999999999999999999999999997743332 2344444221 22367888888887 5555544 6
Q ss_pred hhhccCCCCch
Q 002857 418 YKYKKAPSSST 428 (873)
Q Consensus 418 ~~i~~~p~~~~ 428 (873)
++++.||+...
T Consensus 440 ~EIK~HPfF~~ 450 (550)
T KOG0605|consen 440 EEIKKHPFFKG 450 (550)
T ss_pred HHHhcCCcccc
Confidence 78899998654
No 147
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.1e-35 Score=326.84 Aligned_cols=200 Identities=25% Similarity=0.337 Sum_probs=168.4
Q ss_pred CCCcceeecccCceEEEEEEEc---CCCcEEEEEEeeccC----CcchhHHHHHHHHHHhh-hhccceeeeeeeeccccc
Q 002857 161 GFSSENLIGAGNFASVYKGILF---EGAPAVAIKVFNFLH----HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~---~~g~~VAVK~l~~~~----~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~ 232 (873)
+|++.+.||+|+||.||+++.. .+++.||+|++.... ....+.+..|+.++.++ +|+||+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF-----Q 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE-----e
Confidence 5788999999999999998764 467899999986421 22335678899999999 599999999884 4
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM 312 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~ 312 (873)
.++..++||||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~ 142 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQ----------RDNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEG 142 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCC
Confidence 56678999999999999999842 346889999999999999999999 89999999999999999999
Q ss_pred CeEEeccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 313 TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
.+||+|||+++.+..... .......||..|+|||++.+. .++.++|||||||++|||+||+.||..
T Consensus 143 ~~kl~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 209 (332)
T cd05614 143 HVVLTDFGLSKEFLSEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL 209 (332)
T ss_pred CEEEeeCcCCccccccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence 999999999986533222 122235689999999998875 478899999999999999999999964
No 148
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-35 Score=313.58 Aligned_cols=279 Identities=20% Similarity=0.216 Sum_probs=204.0
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
+.|+..+.|++|.||.||+|+++.+++.||+|+++..... -.-.-++||.+|.+++|||||.+-.+... .+-+..
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG---~~~d~i 152 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVG---SNMDKI 152 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEec---ccccee
Confidence 4577789999999999999999999999999999854322 22356899999999999999999887543 334569
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
||||||++. +|..+|+. ....+...++.-+..|+++||+||| ...|+|||||++|+|+...|.+||+
T Consensus 153 y~VMe~~Eh-DLksl~d~---------m~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKia 219 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMET---------MKQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIA 219 (419)
T ss_pred eeeHHHHHh-hHHHHHHh---------ccCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEec
Confidence 999999987 99999853 4467889999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||+|+.+.... ...+..+-|+.|+|||++.+. .|++..|+||+|||+.||+++++.|.+..+-++ +...+ ..+.
T Consensus 220 DFGLAR~ygsp~--k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQ-l~~If-~llG 295 (419)
T KOG0663|consen 220 DFGLAREYGSPL--KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQ-LDKIF-KLLG 295 (419)
T ss_pred ccchhhhhcCCc--ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHH-HHHHH-HHhC
Confidence 999999876542 233456689999999998886 689999999999999999999999977433211 11111 1110
Q ss_pred hhHHHHhhhhhhhhhhHHHHH--hhhccCCCCchhHHHHHH-HHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETV--YKYKKAPSSSTQRSIILE-CLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~--~~i~~~p~~~~~~~~~~e-~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..... ++..+.+-+.. ..+.++|.......+... ..+.-.+++...|..||.+|-|+.|.++
T Consensus 296 tPte~-----iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 296 TPSEA-----IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred CCccc-----cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 00000 00000000000 111222322221111000 1245668899999999999999998643
No 149
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.4e-35 Score=325.77 Aligned_cols=242 Identities=22% Similarity=0.315 Sum_probs=189.0
Q ss_pred eeecccCceEEEEEEEc---CCCcEEEEEEeeccC----CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 166 NLIGAGNFASVYKGILF---EGAPAVAIKVFNFLH----HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~---~~g~~VAVK~l~~~~----~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+.||+|+||.||+++.. ..++.||||+++... ......+.+|+.+|++++||||+++++++ ..++..+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAF-----QTGGKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEE-----ecCCeEE
Confidence 68999999999999864 467899999987421 22335678899999999999999999985 4566789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++|+|.+++. ....+.+..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 77 lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~D 143 (323)
T cd05584 77 LILEYLSGGELFMHLE----------REGIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTD 143 (323)
T ss_pred EEEeCCCCchHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEee
Confidence 9999999999999984 2345778888999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||+++...... .......||..|+|||++.+..++.++||||||+++|||++|+.||...... . .
T Consensus 144 fg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~--------~ 208 (323)
T cd05584 144 FGLCKESIHEG--TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----K--------T 208 (323)
T ss_pred CcCCeecccCC--CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----H--------H
Confidence 99987542222 1122346899999999999988999999999999999999999999652111 0 0
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-----CHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-----KINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-----Tm~EVl~ 463 (873)
+..+....+ ..|. .....+.+++.+||+.+|++|| ++.+++.
T Consensus 209 ~~~~~~~~~--------------~~~~---------~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 209 IDKILKGKL--------------NLPP---------YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HHHHHcCCC--------------CCCC---------CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 111111100 0000 0122477899999999999999 7777654
No 150
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.8e-35 Score=326.50 Aligned_cols=239 Identities=25% Similarity=0.301 Sum_probs=188.8
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
++||+|+||.||+|++..+++.||||+++.. .....+.+..|+.++..+ +||||+++++++ ...+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~-----~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF-----QTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE-----EcCCEEEEEE
Confidence 4699999999999999889999999998743 223445678898888877 699999999985 4567899999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 76 Ey~~~g~L~~~i~~----------~~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~ 142 (320)
T cd05590 76 EFVNGGDLMFHIQK----------SRRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGM 142 (320)
T ss_pred cCCCCchHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCC
Confidence 99999999998842 346889999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHH
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEE 401 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~e 401 (873)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~----------------- 203 (320)
T cd05590 143 CKEGIFNG--KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD----------------- 203 (320)
T ss_pred CeecCcCC--CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH-----------------
Confidence 87532221 12223468999999999999999999999999999999999999997532110
Q ss_pred HhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHH
Q 002857 402 IVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIND 460 (873)
Q Consensus 402 lid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~E 460 (873)
+....+.... ..|. .....+.+++.+||+.||++||++.+
T Consensus 204 ~~~~i~~~~~----------~~~~---------~~~~~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 204 LFEAILNDEV----------VYPT---------WLSQDAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred HHHHHhcCCC----------CCCC---------CCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 1111111000 0000 01224778999999999999999844
No 151
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.6e-35 Score=333.97 Aligned_cols=202 Identities=23% Similarity=0.315 Sum_probs=172.2
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||++....+++.||||++... .....+.+.+|++++++++||||+++++++ .++..
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF-----QDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCe
Confidence 4788999999999999999999999999999998642 223346788899999999999999999985 45678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl 142 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIK----------YDTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKL 142 (377)
T ss_pred eEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEE
Confidence 9999999999999999842 346788889999999999999999 899999999999999999999999
Q ss_pred ecccccccccccccc---------------------------------------------ccccccccccccCCCcccCC
Q 002857 317 ADFGIARFLEATNEQ---------------------------------------------TSSIGVKGTTGYIAPEYGMG 351 (873)
Q Consensus 317 sDFGla~~~~~~~~~---------------------------------------------~~~~~~~Gt~~Y~APE~l~~ 351 (873)
+|||+++.+...... .......||+.|+|||++.+
T Consensus 143 ~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 222 (377)
T cd05629 143 SDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ 222 (377)
T ss_pred eecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc
Confidence 999999643211000 00012458999999999999
Q ss_pred CCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 352 HETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 352 ~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
..++.++|||||||++|||+||+.||..
T Consensus 223 ~~~~~~~DiwSlGvil~elltG~~Pf~~ 250 (377)
T cd05629 223 QGYGQECDWWSLGAIMFECLIGWPPFCS 250 (377)
T ss_pred CCCCCceeeEecchhhhhhhcCCCCCCC
Confidence 9999999999999999999999999965
No 152
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.4e-35 Score=309.78 Aligned_cols=253 Identities=26% Similarity=0.434 Sum_probs=197.0
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchh--HHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASK--SFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~--~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
|++.+.||+|+||+||++....+++.||+|++......... ....|+.++++++|+||+++++++ ......++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVF-----QDDNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEE-----EESSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccc-----cccccccc
Confidence 56789999999999999999999999999999855433322 345699999999999999999995 34677899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++++|.+++. ....+++..++.++.||++||+||| +.+|+|+||||+||+++.++.++|+||
T Consensus 76 v~~~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Df 142 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQ----------KNKPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDF 142 (260)
T ss_dssp EEEEETTEBHHHHHH----------HHSSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSG
T ss_pred ccccccccccccccc----------ccccccccccccccccccccccccc---ccccccccccccccccccccccccccc
Confidence 999999999999994 2456899999999999999999999 889999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccC-CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGM-GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
|.+..... .........++..|+|||++. +..++.++||||+|+++|+|++|..||....... .
T Consensus 143 g~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~--~----------- 207 (260)
T PF00069_consen 143 GSSVKLSE--NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD--Q----------- 207 (260)
T ss_dssp TTTEESTS--TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH--H-----------
T ss_pred cccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccchh--h-----------
Confidence 99975411 122333456899999999998 7889999999999999999999999997631000 0
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
...+...+...... .. .. .......+.+++..||+.||++||++.++++
T Consensus 208 -~~~~~~~~~~~~~~-----~~----~~------~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 208 -LEIIEKILKRPLPS-----SS----QQ------SREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp -HHHHHHHHHTHHHH-----HT----TS------HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred -hhhhhhcccccccc-----cc----cc------cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 01111111100000 00 00 0000135889999999999999999999874
No 153
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.7e-35 Score=317.87 Aligned_cols=250 Identities=22% Similarity=0.270 Sum_probs=199.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
.+|+..+.||+|+||.||+|+...+++.||+|.+........+.+.+|+.+++.++|+||+++++.+. .+...++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~-----~~~~~~l 94 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELWV 94 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEE-----eCCEEEE
Confidence 57888999999999999999988889999999998665555678999999999999999999999863 4567999
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++++|.+++.. ..+++.+++.++.|++.||+||| +.+|+||||||+|||++.++.+||+||
T Consensus 95 v~e~~~~~~L~~~~~~-----------~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~df 160 (296)
T cd06654 95 VMEYLAGGSLTDVVTE-----------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDF 160 (296)
T ss_pred eecccCCCCHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECcc
Confidence 9999999999999842 34788899999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
|++........ ......++..|+|||++.+..++.++|||||||++|+|++|+.||........ +..+.
T Consensus 161 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-~~~~~-------- 229 (296)
T cd06654 161 GFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIA-------- 229 (296)
T ss_pred ccchhcccccc--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-HHHHh--------
Confidence 99876533221 11223588899999999988899999999999999999999999965221110 00000
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
... .+.... .......+.+++.+||+.+|++|||+.||+.
T Consensus 230 ---~~~-----------------~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 230 ---TNG-----------------TPELQN----PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ---cCC-----------------CCCCCC----ccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 000 000000 0011234778999999999999999999986
No 154
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.8e-35 Score=316.38 Aligned_cols=265 Identities=23% Similarity=0.396 Sum_probs=200.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeeccccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~ 232 (873)
.++|++.+.||+|+||.||+|.+.. ++..||+|++..... .....+.+|+.++++++|+||+++++++ .
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~-----~ 78 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVC-----A 78 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEE-----c
Confidence 4678999999999999999998742 567899999874432 2346789999999999999999999986 3
Q ss_pred CCceEEEEEeecCCCChhhhccccccccc------------ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeecc
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDK------------RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCD 300 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~------------~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrD 300 (873)
.+...++||||+++|+|.+++........ .......+++..++.++.||+.||+||| ..+++|||
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~d 155 (288)
T cd05050 79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRD 155 (288)
T ss_pred CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeeccc
Confidence 45578999999999999999963211000 0112245788999999999999999999 89999999
Q ss_pred CCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCc
Q 002857 301 IKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDD 379 (873)
Q Consensus 301 LKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~ 379 (873)
|||+|||++.++.++|+|||+++................+..|+|||.+.+..++.++|||||||++|||++ |..||..
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999876533221111222235678999999988899999999999999999998 8888854
Q ss_pred ccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHH
Q 002857 380 MFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIN 459 (873)
Q Consensus 380 ~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~ 459 (873)
..... . ...+.+..+.. .+. .+...+.+++.+||+.+|++|||+.
T Consensus 236 ~~~~~-----~--------~~~~~~~~~~~-------------~~~---------~~~~~l~~li~~~l~~~p~~Rpt~~ 280 (288)
T cd05050 236 MAHEE-----V--------IYYVRDGNVLS-------------CPD---------NCPLELYNLMRLCWSKLPSDRPSFA 280 (288)
T ss_pred CCHHH-----H--------HHHHhcCCCCC-------------CCC---------CCCHHHHHHHHHHcccCcccCCCHH
Confidence 21110 0 00110000000 000 1123578899999999999999999
Q ss_pred HHHHHHH
Q 002857 460 DVELGLR 466 (873)
Q Consensus 460 EVl~~Le 466 (873)
||+..|+
T Consensus 281 el~~~l~ 287 (288)
T cd05050 281 SINRILQ 287 (288)
T ss_pred HHHHHhh
Confidence 9999886
No 155
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5.8e-35 Score=333.09 Aligned_cols=269 Identities=20% Similarity=0.306 Sum_probs=201.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccCC-cchhHHHHHHHHHHhhh-hccceeeeeeeecccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLHH-DASKSFTVECEVMRNII-HRKIIKVVTACSRVDY 231 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~ 231 (873)
.++|.+.++||+|+||.||+|++.. .++.||||+++.... ...+.+.+|+++|.++. |+||++++++|.
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~---- 111 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT---- 111 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc----
Confidence 3457788999999999999998642 346899999975432 22357889999999997 999999999963
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccc---------------------------------------------------
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEED--------------------------------------------------- 260 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~--------------------------------------------------- 260 (873)
.....++||||+++|+|.++|+......
T Consensus 112 -~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 112 -KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred -cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 4457899999999999999996421100
Q ss_pred -------------------------------------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCC
Q 002857 261 -------------------------------------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKP 303 (873)
Q Consensus 261 -------------------------------------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKp 303 (873)
........+++..++.|+.||+.||+||| +.+|+||||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp 267 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAA 267 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCc
Confidence 00011235778889999999999999999 89999999999
Q ss_pred CCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccc
Q 002857 304 SNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFK 382 (873)
Q Consensus 304 sNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~ 382 (873)
+|||+++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 999999999999999999986533222122222346788999999998889999999999999999998 8889865321
Q ss_pred cchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 383 DNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 383 ~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
... ..+.+...... ..|. .+...+.+++.+||+.+|.+||++.||+
T Consensus 348 ~~~-------------~~~~~~~~~~~------------~~p~---------~~~~~l~~li~~cl~~~P~~RPs~~ell 393 (401)
T cd05107 348 NEQ-------------FYNAIKRGYRM------------AKPA---------HASDEIYEIMQKCWEEKFEIRPDFSQLV 393 (401)
T ss_pred hHH-------------HHHHHHcCCCC------------CCCC---------CCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 110 01111100000 0010 0123578899999999999999999999
Q ss_pred HHHHHHH
Q 002857 463 LGLRLIK 469 (873)
Q Consensus 463 ~~Le~i~ 469 (873)
..|+.+.
T Consensus 394 ~~L~~~~ 400 (401)
T cd05107 394 HLVGDLL 400 (401)
T ss_pred HHHHHHh
Confidence 9998763
No 156
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=5.4e-35 Score=317.84 Aligned_cols=271 Identities=20% Similarity=0.310 Sum_probs=198.7
Q ss_pred cCCCcceeecccCceEEEEEEEcC----------------CCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceee
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE----------------GAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKV 222 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~----------------~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~l 222 (873)
++|++.+.||+|+||.||++.+.. +...||+|+++... ......+.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 578999999999999999986432 34479999987442 2334678999999999999999999
Q ss_pred eeeeecccccCCceEEEEEeecCCCChhhhccccccccc-ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccC
Q 002857 223 VTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDK-RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDI 301 (873)
Q Consensus 223 lg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~-~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDL 301 (873)
++++ ...+..++||||+++|+|.+++........ .......+++.+++.++.||+.||+||| +.+|+|+||
T Consensus 85 ~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl 156 (296)
T cd05095 85 LAVC-----ITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDL 156 (296)
T ss_pred EEEE-----ecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccC
Confidence 9986 345568999999999999999864211100 0122345788899999999999999999 899999999
Q ss_pred CCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh--CCCCCCc
Q 002857 302 KPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT--GLRPSDD 379 (873)
Q Consensus 302 KpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT--Gk~Pf~~ 379 (873)
||+|||++.++.++|+|||+++.+.............++..|+|||...++.++.++||||||+++|||++ |..||..
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~ 236 (296)
T cd05095 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQ 236 (296)
T ss_pred ChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccc
Confidence 99999999999999999999986543322121222334678999999888889999999999999999998 7778754
Q ss_pred ccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHH
Q 002857 380 MFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIN 459 (873)
Q Consensus 380 ~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~ 459 (873)
..... .+. ............ .....+. .+...+.+++.+||+.||++||++.
T Consensus 237 ~~~~~-----~~~-----~~~~~~~~~~~~---------~~~~~~~---------~~~~~~~~li~~cl~~~p~~Rp~~~ 288 (296)
T cd05095 237 LSDEQ-----VIE-----NTGEFFRDQGRQ---------VYLPKPA---------LCPDSLYKLMLSCWRRNAKERPSFQ 288 (296)
T ss_pred cChHH-----HHH-----HHHHHHhhcccc---------ccCCCCC---------CCCHHHHHHHHHHcCCCcccCCCHH
Confidence 22111 000 000000000000 0000000 1223578999999999999999999
Q ss_pred HHHHHHH
Q 002857 460 DVELGLR 466 (873)
Q Consensus 460 EVl~~Le 466 (873)
||++.|+
T Consensus 289 ~i~~~l~ 295 (296)
T cd05095 289 EIHATLL 295 (296)
T ss_pred HHHHHHh
Confidence 9999886
No 157
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.3e-35 Score=324.48 Aligned_cols=199 Identities=26% Similarity=0.302 Sum_probs=169.3
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCce
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~ 236 (873)
+|++.+.||+|+||.||+|++..+++.||||+++... ......+..|..++..+ +|++|+++++++ ...+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF-----QTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE-----ecCCE
Confidence 5788999999999999999998889999999987432 22334567788888877 588899998885 45667
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ...+++.+++.++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~----------~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL 142 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQ----------VGRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKI 142 (323)
T ss_pred EEEEEcCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEE
Confidence 9999999999999998842 345888999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 143 ~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~ 203 (323)
T cd05616 143 ADFGMCKENMWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 203 (323)
T ss_pred ccCCCceecCCCC--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCC
Confidence 9999997532211 122235689999999999999999999999999999999999999975
No 158
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4e-35 Score=312.85 Aligned_cols=254 Identities=24% Similarity=0.292 Sum_probs=197.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|.+.+.||+|+||.||+|++..+++.||+|+++.........+.+|+.+++.++||||+++++.+ ...+..+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~-----~~~~~~~ 82 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSY-----LRRDKLW 82 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEE-----EeCCEEE
Confidence 34788889999999999999999888999999998765545556788999999999999999999985 4466789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. ...+++.+++.++.|++.||.||| +.+|+|+||||+||+++.++.+||+|
T Consensus 83 lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~d 149 (267)
T cd06645 83 ICMEFCGGGSLQDIYHV----------TGPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLAD 149 (267)
T ss_pred EEEeccCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECc
Confidence 99999999999999842 346889999999999999999999 88999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccC---CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGM---GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
||++....... .......|+..|+|||++. ...++.++|||||||++|||++|+.||....... ......
T Consensus 150 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~-~~~~~~---- 222 (267)
T cd06645 150 FGVSAQITATI--AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-ALFLMT---- 222 (267)
T ss_pred ceeeeEccCcc--cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh-hHHhhh----
Confidence 99987653221 1122346899999999874 4568899999999999999999999985422110 000000
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..... .+...... .....+.+++.+||+.+|++||++.+|++
T Consensus 223 --------~~~~~--------------~~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 223 --------KSNFQ--------------PPKLKDKM----KWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred --------ccCCC--------------CCcccccC----CCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00000 00000000 01224678999999999999999999865
No 159
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.9e-35 Score=327.04 Aligned_cols=204 Identities=24% Similarity=0.243 Sum_probs=170.7
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeeccc-ccC
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVD-YQG 233 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~-~~~ 233 (873)
...++|++.+.||+|+||.||++.+...++.||||++.... ......+.+|+.+++.++|+||+++++++.... ...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 35678999999999999999999988889999999986432 233467888999999999999999999864321 122
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
....++||||+++ +|.+.+. ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~------------~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~ 157 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ------------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCT 157 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh------------hcCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCC
Confidence 3457999999965 6766662 23778889999999999999999 899999999999999999999
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+||+|||+++...... ......+|..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 ~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 220 (355)
T cd07874 158 LKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220 (355)
T ss_pred EEEeeCcccccCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999998653321 12234689999999999999999999999999999999999999975
No 160
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.2e-34 Score=307.09 Aligned_cols=255 Identities=24% Similarity=0.295 Sum_probs=201.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.+.||.|+||.||+|....+++.+|+|++........+.+.+|++++++++|+||+++++++ ......+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 76 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY-----LRRDKLW 76 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEE-----EeCCEEE
Confidence 35789999999999999999999888899999999866555667899999999999999999999985 4466799
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
++|||+++++|.+++.. ....+++.++..++.|++.||+||| ..+|+|+||+|+||++++++.+||+|
T Consensus 77 l~~e~~~~~~l~~~~~~---------~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d 144 (262)
T cd06613 77 IVMEYCGGGSLQDIYQV---------TRGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLAD 144 (262)
T ss_pred EEEeCCCCCcHHHHHHh---------hccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECc
Confidence 99999999999998842 2256889999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCC---CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH---ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~---~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
||++........ ......++..|+|||++.+. .++.++||||||+++|||+||+.||......... ..
T Consensus 145 ~g~~~~~~~~~~--~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~-~~------ 215 (262)
T cd06613 145 FGVSAQLTATIA--KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL-FL------ 215 (262)
T ss_pred cccchhhhhhhh--ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HH------
Confidence 999976543221 12234578899999998877 8899999999999999999999998653211100 00
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+....+. .+.... .......+.+++.+||+.+|.+|||+.+|+.
T Consensus 216 ------~~~~~~~--------------~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 216 ------ISKSNFP--------------PPKLKD----KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred ------HHhccCC--------------Cccccc----hhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000 000000 0111335789999999999999999999874
No 161
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=6.4e-35 Score=319.06 Aligned_cols=266 Identities=26% Similarity=0.401 Sum_probs=199.0
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCc--EEEEEEeeccC-CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAP--AVAIKVFNFLH-HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~--~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~ 235 (873)
++|++.+.||+|+||.||+|.+..++. .+|+|.++... ......+.+|++++.++ +|+||+++++++ ...+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~-----~~~~ 81 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRG 81 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEE-----CCCC
Confidence 467888999999999999999877665 45777765332 23345788999999999 899999999986 4456
Q ss_pred eEEEEEeecCCCChhhhccccccccc------ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDK------RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~------~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
..++||||+++|+|.++++....... .......+++.+++.++.||+.||+||| +.+|+||||||+|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~ 158 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVG 158 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEec
Confidence 78999999999999999963110000 0012346889999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhH
Q 002857 310 DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 310 ~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~ 388 (873)
.++.+||+|||+++...... ......++..|+|||++.+..++.++||||||+++|||+| |..||....... ..
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~ 233 (303)
T cd05088 159 ENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LY 233 (303)
T ss_pred CCCcEEeCccccCcccchhh---hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH--HH
Confidence 99999999999986432111 1111224667999999988889999999999999999998 999986421110 00
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
. .+... .... .+. .....+.+++.+||+.+|++||++.+++.+|+.+
T Consensus 234 ~-----------~~~~~-~~~~------------~~~---------~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 234 E-----------KLPQG-YRLE------------KPL---------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred H-----------HHhcC-CcCC------------CCC---------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0 00000 0000 000 0122477899999999999999999999999887
Q ss_pred HHh
Q 002857 469 KKK 471 (873)
Q Consensus 469 ~~~ 471 (873)
...
T Consensus 281 ~~~ 283 (303)
T cd05088 281 LEE 283 (303)
T ss_pred HHh
Confidence 543
No 162
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=7.5e-35 Score=336.12 Aligned_cols=279 Identities=22% Similarity=0.276 Sum_probs=195.6
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeeccccc---CC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQ---GN 234 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~---~~ 234 (873)
...+|++.++||+|+||.||+|.+..+++.||||++.... ....+|+.+|+.++|+||+++++++....+. ..
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3467999999999999999999998889999999885321 3346799999999999999999876432211 22
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC-C
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM-T 313 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~-~ 313 (873)
...++||||+++ +|.+++... ......+++..++.++.||+.||+||| +.+|+||||||+|||++.++ .
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~------~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~ 209 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHY------ARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHT 209 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHH------hhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCc
Confidence 357799999975 777776421 123456889999999999999999999 89999999999999999654 7
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
+||+|||+++.+..... .....||..|+|||++.+. .++.++|||||||++|||+||..||....... .+...+.
T Consensus 210 vkL~DFGla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~ 285 (440)
T PTZ00036 210 LKLCDFGSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQ 285 (440)
T ss_pred eeeeccccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH
Confidence 99999999986643221 2234689999999988764 68999999999999999999999997632211 1111111
Q ss_pred hcCch---hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 393 SALPE---RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 393 ~~~~~---~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..-.. .+.. ..+.+.. .....+ ...............++.+|+.+||+.||.+|||+.|++.
T Consensus 286 ~~~~p~~~~~~~-~~~~~~~-----~~~~~~---~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 286 VLGTPTEDQLKE-MNPNYAD-----IKFPDV---KPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HhCCCCHHHHHH-hchhhhc-----ccCCcc---CchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 11000 1110 0000000 000000 0000000000112345789999999999999999999874
No 163
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-35 Score=335.00 Aligned_cols=244 Identities=24% Similarity=0.313 Sum_probs=203.5
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~ 233 (873)
..++|...++||+|.||+|+++..+.+++.+|||++++. ..++.+..+.|..|+... +||.+++++.. |+.
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~-----fQT 440 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC-----FQT 440 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc-----ccc
Confidence 456899999999999999999999999999999999854 345567888999998888 59999999988 588
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
.+++++||||+.||++..+. ....+++..+.-++..|+.||+||| .++||+||||.+|||||.+|+
T Consensus 441 ~~~l~fvmey~~Ggdm~~~~-----------~~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh 506 (694)
T KOG0694|consen 441 KEHLFFVMEYVAGGDLMHHI-----------HTDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGH 506 (694)
T ss_pred CCeEEEEEEecCCCcEEEEE-----------ecccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCc
Confidence 99999999999999955544 3467999999999999999999999 899999999999999999999
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+||+|||+++..-. ....+....||+.|||||++.+..|+...|.|||||+||||+.|+.||.+..+
T Consensus 507 ~kiADFGlcKe~m~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE----------- 573 (694)
T KOG0694|consen 507 VKIADFGLCKEGMG--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE----------- 573 (694)
T ss_pred EEecccccccccCC--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH-----------
Confidence 99999999985432 22345567899999999999999999999999999999999999999986322
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKI 458 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm 458 (873)
.++.|..+..++.- | . -+..+.+.|+.+.|..+|++|--+
T Consensus 574 ------ee~FdsI~~d~~~y----------P-----~----~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 574 ------EEVFDSIVNDEVRY----------P-----R----FLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ------HHHHHHHhcCCCCC----------C-----C----cccHHHHHHHHHHhccCcccccCC
Confidence 23444444433210 0 0 112347789999999999999866
No 164
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=8.2e-35 Score=307.41 Aligned_cols=250 Identities=27% Similarity=0.284 Sum_probs=200.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
++|+..+.||+|+||.||+|.+..+++.+|+|.++.... .+.+.+|++++++++|+||+++++++ ......++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~l 75 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSY-----FKNTDLWI 75 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCcEEE
Confidence 578999999999999999999988889999999874432 57899999999999999999999986 34577899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
++||+++++|.+++.. ....+++..++.++.|++.||.||| ..+|+|+||+|+||+++.++.+||+||
T Consensus 76 ~~e~~~~~~L~~~l~~---------~~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~df 143 (256)
T cd06612 76 VMEYCGAGSVSDIMKI---------TNKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADF 143 (256)
T ss_pred EEecCCCCcHHHHHHh---------CccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEccc
Confidence 9999999999999842 2456899999999999999999999 889999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
|++........ ......++..|+|||++.+..++.++||||||+++|+|++|+.||......... .
T Consensus 144 g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~--~---------- 209 (256)
T cd06612 144 GVSGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI--F---------- 209 (256)
T ss_pred ccchhcccCcc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh--h----------
Confidence 99986643321 122344788999999999889999999999999999999999998653211100 0
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
. +........ . ........+.+++.+||+.+|++|||+.||++
T Consensus 210 -~-~~~~~~~~~---------------~----~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 210 -M-IPNKPPPTL---------------S----DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred -h-hccCCCCCC---------------C----chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 0 000000000 0 00011235788999999999999999999875
No 165
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=6.2e-35 Score=309.28 Aligned_cols=251 Identities=18% Similarity=0.230 Sum_probs=199.1
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
+|++.+.||+|+||.||++.+..+++.+|+|.++... ....+.+.+|+.++++++|+||+++++.+ ......++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF-----EADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EECCEEEE
Confidence 4788899999999999999998899999999986432 33456788999999999999999999985 45678999
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++|+|.+++.. .....+++...+.++.||+.||.||| +.+|+|+||||+||++++++.++|+||
T Consensus 76 v~e~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~df 144 (255)
T cd08219 76 VMEYCDGGDLMQKIKL--------QRGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDF 144 (255)
T ss_pred EEeeCCCCcHHHHHHh--------ccCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEccc
Confidence 9999999999998843 23345788899999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
|+++....... ......++..|+|||++.+..++.++||||||+++|+|++|+.||...... ...
T Consensus 145 g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-----~~~-------- 209 (255)
T cd08219 145 GSARLLTSPGA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK-----NLI-------- 209 (255)
T ss_pred Ccceeeccccc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH-----HHH--------
Confidence 99976543221 122345888999999999888999999999999999999999999652111 000
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
..+ ..... .+.. ......+.+++.+||+.+|++|||+.||+..
T Consensus 210 ~~~----~~~~~-----------~~~~-------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 210 LKV----CQGSY-----------KPLP-------SHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHH----hcCCC-----------CCCC-------cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 000 00000 0000 0012246789999999999999999998764
No 166
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=8e-35 Score=311.39 Aligned_cols=257 Identities=23% Similarity=0.395 Sum_probs=200.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCC---CcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEG---APAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~---g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
++|++.++||+|+||.||+|.+... ...||||...... ....+.+.+|+.++++++|+||+++++++. ..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~------~~ 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT------EN 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEc------CC
Confidence 4678889999999999999987543 3468999886544 334567999999999999999999999863 24
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.+++.. ....+++..++.++.|++.||+||| +.+++|+||||+|||++.++.+|
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~ 147 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQV---------NKYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVK 147 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeE
Confidence 46899999999999999942 2345899999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+++......... .....++..|+|||.+....++.++||||||+++|||++ |..||....... ....+.
T Consensus 148 l~d~g~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~~~-- 222 (270)
T cd05056 148 LGDFGLSRYLEDESYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--VIGRIE-- 222 (270)
T ss_pred EccCceeeeccccccee-cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHH--
Confidence 99999998654432111 112234568999999988889999999999999999996 999986532111 000000
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
. .. ..+.. ..+...+.+++.+||..+|++|||+.++++.|+.++.
T Consensus 223 ---------~----~~-----------~~~~~-------~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 223 ---------N----GE-----------RLPMP-------PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred ---------c----CC-----------cCCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0 00 00000 0112357889999999999999999999999998754
No 167
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.9e-35 Score=312.47 Aligned_cols=258 Identities=22% Similarity=0.419 Sum_probs=201.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCc----EEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAP----AVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~----~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.+|++.+.||+|+||.||+|.+..++. .||+|.+..... .....+.+|+.++++++|+||++++++|..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 467888999999999999999866554 589998865433 234678899999999999999999999742
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++|+|.+++.. ....+++..++.++.||+.||+||| +.+|+|+||||+|||+++++.+
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~ 148 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRN---------HKDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHV 148 (279)
T ss_pred CceEEEEecCCCCcHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeE
Confidence 568999999999999999853 2345899999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+++...............++..|+|||.+....++.++||||||+++|||++ |+.||.......
T Consensus 149 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------- 219 (279)
T cd05057 149 KITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE--------- 219 (279)
T ss_pred EECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH---------
Confidence 9999999987653322222222224578999999988889999999999999999999 999986532111
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
+.+.+.. .. ..+.... +...+.+++.+||..+|++||++.++++.|+.+..
T Consensus 220 -----~~~~~~~---~~-----------~~~~~~~-------~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 220 -----IPDLLEK---GE-----------RLPQPPI-------CTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred -----HHHHHhC---CC-----------CCCCCCC-------CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111110 00 0000000 11246789999999999999999999999998754
No 168
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1e-34 Score=314.25 Aligned_cols=270 Identities=23% Similarity=0.254 Sum_probs=207.2
Q ss_pred ccCHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeee
Q 002857 149 YVSYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACS 227 (873)
Q Consensus 149 ~~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~ 227 (873)
.++++++..++++|++.+.||+|+||.||++....+++.+|+|++.... .....+.+|+.++.++ +|+|++++++++.
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 3556777788999999999999999999999998899999999986432 2346778899999999 8999999999976
Q ss_pred cccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCee
Q 002857 228 RVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNIL 307 (873)
Q Consensus 228 ~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNIL 307 (873)
..+.......++||||+++|+|.++++.. ......+++..++.++.|++.||.||| ..+|+|+||||+||+
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~------~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nil 160 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGL------LICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNIL 160 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHh------hhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEE
Confidence 54333345789999999999999988531 122456889999999999999999999 889999999999999
Q ss_pred eCCCCCeEEeccccccccccccccccccccccccccCCCcccCCC-----CCCcchhhHhHHHHHHHHHhCCCCCCcccc
Q 002857 308 LNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-----ETSSYGDVYSFGILLLEMFTGLRPSDDMFK 382 (873)
Q Consensus 308 Ld~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-----~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~ 382 (873)
++.++.+||+|||+++....... ......++..|+|||++... .++.++|||||||++|||++|+.||.....
T Consensus 161 i~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~ 238 (291)
T cd06639 161 LTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP 238 (291)
T ss_pred EcCCCCEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH
Confidence 99999999999999986543221 11234578899999987643 368899999999999999999999865311
Q ss_pred cchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 383 DNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 383 ~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
.. .+. .+..... +.... ..+....+.+++.+||+.+|++||++.|++
T Consensus 239 ~~-~~~------------~~~~~~~----------------~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~il 285 (291)
T cd06639 239 VK-TLF------------KIPRNPP----------------PTLLH----PEKWCRSFNHFISQCLIKDFEARPSVTHLL 285 (291)
T ss_pred HH-HHH------------HHhcCCC----------------CCCCc----ccccCHHHHHHHHHHhhcChhhCcCHHHHh
Confidence 10 000 0000000 00000 001123478899999999999999999987
Q ss_pred H
Q 002857 463 L 463 (873)
Q Consensus 463 ~ 463 (873)
+
T Consensus 286 ~ 286 (291)
T cd06639 286 E 286 (291)
T ss_pred c
Confidence 5
No 169
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.8e-35 Score=319.76 Aligned_cols=270 Identities=21% Similarity=0.342 Sum_probs=202.4
Q ss_pred cCCCcceeecccCceEEEEEEEcC-------CCcEEEEEEeeccC-CcchhHHHHHHHHHHhh-hhccceeeeeeeeccc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE-------GAPAVAIKVFNFLH-HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVD 230 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~-------~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~ 230 (873)
++|.+.+.||+|+||.||+|+... ....||+|+++... ......+..|+++++++ +|+||++++++|.
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--- 88 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT--- 88 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc---
Confidence 467889999999999999997632 34579999987432 23345788999999999 6999999999863
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccc------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCC
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEED------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPS 304 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKps 304 (873)
.....++||||+++|+|.+++....... ........+++.+++.++.||+.||.||| +.+|+||||||+
T Consensus 89 --~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~ 163 (314)
T cd05099 89 --QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAAR 163 (314)
T ss_pred --cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccce
Confidence 4556899999999999999995421100 00112346899999999999999999999 899999999999
Q ss_pred CeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCccccc
Q 002857 305 NILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKD 383 (873)
Q Consensus 305 NILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~ 383 (873)
|||++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~ 243 (314)
T cd05099 164 NVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE 243 (314)
T ss_pred eEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999986543222111112234567999999998899999999999999999999 88888653111
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
. +. +.+.. .. .+.. ...+...+.+++.+||+.+|++|||+.||++
T Consensus 244 ~--~~------------~~~~~---~~------------~~~~------~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 244 E--LF------------KLLRE---GH------------RMDK------PSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred H--HH------------HHHHc---CC------------CCCC------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 0 00 00000 00 0000 0011235778999999999999999999999
Q ss_pred HHHHHHHhh
Q 002857 464 GLRLIKKKL 472 (873)
Q Consensus 464 ~Le~i~~~l 472 (873)
.|+.+....
T Consensus 289 ~l~~~~~~~ 297 (314)
T cd05099 289 ALDKVLAAV 297 (314)
T ss_pred HHHHHHHHh
Confidence 999886654
No 170
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.2e-34 Score=322.10 Aligned_cols=285 Identities=16% Similarity=0.227 Sum_probs=200.7
Q ss_pred HHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 154 ALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 154 el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
......++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|+++|++++|+||+++++++.....
T Consensus 9 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07878 9 TVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATS 88 (343)
T ss_pred HHhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccc
Confidence 344567889999999999999999999988999999999864322 233567889999999999999999988643211
Q ss_pred -cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC
Q 002857 232 -QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND 310 (873)
Q Consensus 232 -~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~ 310 (873)
......+++++++ +++|.+++. ...+++..+..|+.||+.||.||| +.+|+||||||+|||++.
T Consensus 89 ~~~~~~~~~~~~~~-~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~ 153 (343)
T cd07878 89 IENFNEVYLVTNLM-GADLNNIVK-----------CQKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNE 153 (343)
T ss_pred ccccCcEEEEeecC-CCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECC
Confidence 1224578999988 779988773 245889999999999999999999 899999999999999999
Q ss_pred CCCeEEeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHH
Q 002857 311 EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQN 389 (873)
Q Consensus 311 ~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~ 389 (873)
++.+||+|||+++..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+..
T Consensus 154 ~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~ 227 (343)
T cd07878 154 DCELRILDFGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKR 227 (343)
T ss_pred CCCEEEcCCccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHH
Confidence 999999999999865332 223458999999999877 56899999999999999999999999653211 11111
Q ss_pred HHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 390 WVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 390 ~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+. ........+......... . +.........+. .............+.+++.+||+.||++|||+.|+++
T Consensus 228 ~~-~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 228 IM-EVVGTPSPEVLKKISSEH-A-RKYIQSLPHMPQ-QDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HH-HHhCCCCHHHHHhcchhh-H-HHHhhccccccc-hhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11 100000011111000000 0 000000000000 0000001111234678999999999999999999875
No 171
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.5e-35 Score=325.65 Aligned_cols=194 Identities=25% Similarity=0.317 Sum_probs=166.4
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.||+|+||.||+|++..+++.||+|+++... ....+.+..|+.++.++ +||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEE-----EeCCEEEEEE
Confidence 47999999999999999999999999997432 22345678899988877 899999999985 4567899999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|..++. ....+++..+..|+.||+.||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 76 E~~~~~~L~~~~~----------~~~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~ 142 (329)
T cd05618 76 EYVNGGDLMFHMQ----------RQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGM 142 (329)
T ss_pred eCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCc
Confidence 9999999998873 2356899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
++...... .......||..|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 143 CKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred cccccCCC--CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence 97532211 112235689999999999999999999999999999999999999964
No 172
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.6e-35 Score=323.60 Aligned_cols=242 Identities=24% Similarity=0.311 Sum_probs=190.7
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.||+|+||.||+|.+..+++.||||+++.. .......+..|++++..+ +||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~-----~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCF-----QTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 4699999999999999888999999999743 223345678899999888 799999999985 4566899999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|..++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 76 e~~~~~~L~~~~~~----------~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 142 (318)
T cd05570 76 EYVNGGDLMFHIQR----------SGRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGM 142 (318)
T ss_pred cCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCC
Confidence 99999999988842 346899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHH
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEE 401 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~e 401 (873)
++...... .......|+..|+|||++.+..++.++|||||||++|||++|+.||....... .. ..
T Consensus 143 ~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~--~~-----------~~ 207 (318)
T cd05570 143 CKEGILGG--VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE--LF-----------QS 207 (318)
T ss_pred CeecCcCC--CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH--HH-----------HH
Confidence 87432211 11223458999999999999999999999999999999999999996532110 00 00
Q ss_pred HhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCH-----HHHHH
Q 002857 402 IVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKI-----NDVEL 463 (873)
Q Consensus 402 lid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm-----~EVl~ 463 (873)
+.. ... ..|. .....+.+++.+||+.||++||++ .+++.
T Consensus 208 i~~----~~~----------~~~~---------~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 208 ILE----DEV----------RYPR---------WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHc----CCC----------CCCC---------cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 000 000 0000 012347789999999999999999 66543
No 173
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1e-34 Score=325.82 Aligned_cols=204 Identities=24% Similarity=0.247 Sum_probs=171.0
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeeccc-ccCC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVD-YQGN 234 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~-~~~~ 234 (873)
..++|.+.+.||+|+||.||++.+...++.||||++.... ......+.+|+.+++.++|+||+++++++.... ....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999998889999999986432 233467889999999999999999999864321 1233
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++ +|.+++. ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~------------~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 165 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ------------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 165 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH------------hcCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcE
Confidence 467999999965 7777662 23778889999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
||+|||+++...... ......+|..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 166 kL~DfG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 166 KILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred EEEeCCCccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 999999998653321 122345899999999999999999999999999999999999999753
No 174
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=4.4e-35 Score=324.63 Aligned_cols=194 Identities=25% Similarity=0.316 Sum_probs=167.1
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
++||+|+||.||+|++..+++.||||+++... ....+.+..|+.++.++ +||||+++++++ ......+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE-----EcCCEEEEEE
Confidence 46999999999999999899999999997432 22345688899999998 799999999985 4566799999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|.+++. ....+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 76 e~~~~g~L~~~~~----------~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~ 142 (329)
T cd05588 76 EFVSGGDLMFHMQ----------RQRKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGM 142 (329)
T ss_pred eCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCcc
Confidence 9999999998883 2356899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
++...... .......||..|+|||++.+..++.++|||||||++|||+||+.||+.
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 198 (329)
T cd05588 143 CKEGIRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred ccccccCC--CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence 87432211 122235689999999999999999999999999999999999999964
No 175
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.3e-34 Score=312.20 Aligned_cols=251 Identities=26% Similarity=0.347 Sum_probs=194.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
++|+..++||+|+||.||+|.+..+++.||+|++.... ......+.+|++++++++||||+++++++. ..+..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFF-----VENRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----ECCEEE
Confidence 36788899999999999999998899999999986442 233467889999999999999999999963 456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|..+. .+++..+..++.|++.||.||| +.+|+|+||||+|||++.++.++|+|
T Consensus 76 lv~e~~~~~~l~~~~--------------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~d 138 (279)
T cd06619 76 ICTEFMDGGSLDVYR--------------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCD 138 (279)
T ss_pred EEEecCCCCChHHhh--------------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEee
Confidence 999999999997543 2567788899999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||++...... ......++..|+|||++.+..++.++||||||+++|+|++|+.||.......... ....
T Consensus 139 fg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~-------~~~~ 207 (279)
T cd06619 139 FGVSTQLVNS----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL-------MPLQ 207 (279)
T ss_pred CCcceecccc----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc-------chHH
Confidence 9999765322 1223468999999999999899999999999999999999999996532211100 0000
Q ss_pred H-HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 399 V-EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 399 l-~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
. ..+.+.. .+.... . .....+.+++.+||+.+|++||++.|++..
T Consensus 208 ~~~~~~~~~----------------~~~~~~-~----~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 208 LLQCIVDED----------------PPVLPV-G----QFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHhccC----------------CCCCCC-C----cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0 0000000 000000 0 012247789999999999999999998764
No 176
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.7e-35 Score=332.16 Aligned_cols=255 Identities=22% Similarity=0.265 Sum_probs=197.3
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
..++|++.+.||+|+||.||+++...+++.||+|+++.. .......+.+|+.+++.++||||+++++++ ..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-----~~~ 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-----QDD 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----ecC
Confidence 456899999999999999999999989999999998642 222335578899999999999999999885 556
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++|+|.+++.. ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~-----------~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~ 181 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSN-----------YDIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHL 181 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCE
Confidence 789999999999999999842 24778888999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCC----CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHH
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH----ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~----~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~ 390 (873)
||+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.......
T Consensus 182 kL~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------ 254 (370)
T cd05596 182 KLADFGTCMKMDANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------ 254 (370)
T ss_pred EEEeccceeeccCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH------
Confidence 9999999986543221 112234689999999988653 47899999999999999999999997521110
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCC--CCCHHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGE--RMKINDVELG 464 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~e--RPTm~EVl~~ 464 (873)
....+.+..-. ...|... .....+.+++..||+.+|++ ||++.|++..
T Consensus 255 -------~~~~i~~~~~~------------~~~~~~~-------~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 255 -------TYSKIMDHKNS------------LTFPDDI-------EISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred -------HHHHHHcCCCc------------CCCCCcC-------CCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 11111110000 0001000 01234778999999999988 9999998654
No 177
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.6e-34 Score=307.63 Aligned_cols=253 Identities=27% Similarity=0.421 Sum_probs=196.6
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
++|.+...||+|++|.||+|.+..+ ..||+|++.... ...+.+.+|++++++++|+|++++++++. ....++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~~ 77 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS------EEPIYI 77 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc------CCCcEE
Confidence 4688889999999999999987544 469999876433 23467899999999999999999998842 345789
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++|+|.++++. .....+++..++.++.|++.||+||| +.+|+|+||||+||++++++.++|+||
T Consensus 78 v~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~df 146 (260)
T cd05069 78 VTEFMGKGSLLDFLKE--------GDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADF 146 (260)
T ss_pred EEEcCCCCCHHHHHhh--------CCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCC
Confidence 9999999999999953 22345789999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
|+++....... .......++..|+|||+..+..++.++||||||+++|||+| |+.||....... ...++...
T Consensus 147 g~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~---- 219 (260)
T cd05069 147 GLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQVERG---- 219 (260)
T ss_pred ccceEccCCcc-cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC----
Confidence 99986533221 11122346778999999988899999999999999999999 899986532110 00100000
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
.. .+.. ......+.+++.+||+.+|++||++.+|++.|+.
T Consensus 220 --------~~--------------~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 220 --------YR--------------MPCP-------QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --------CC--------------CCCC-------cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 00 0000 0113357889999999999999999999999874
No 178
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.4e-35 Score=332.32 Aligned_cols=203 Identities=23% Similarity=0.329 Sum_probs=172.3
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||+|+...+++.||||++.... ......+.+|+++|++++|+||+++++.+ ..++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCE
Confidence 36899999999999999999999899999999986322 22345688999999999999999999985 55678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~----------~~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL 142 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIR----------LGIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKL 142 (376)
T ss_pred EEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEE
Confidence 9999999999999999842 345788888999999999999999 899999999999999999999999
Q ss_pred ecccccccccccc-----------------------------------------ccccccccccccccCCCcccCCCCCC
Q 002857 317 ADFGIARFLEATN-----------------------------------------EQTSSIGVKGTTGYIAPEYGMGHETS 355 (873)
Q Consensus 317 sDFGla~~~~~~~-----------------------------------------~~~~~~~~~Gt~~Y~APE~l~~~~~s 355 (873)
+|||++..+.... .........||..|+|||++.+..++
T Consensus 143 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 222 (376)
T cd05598 143 TDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYT 222 (376)
T ss_pred EeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCC
Confidence 9999975321000 00001134699999999999999999
Q ss_pred cchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 356 SYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 356 ~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
.++|||||||++|||++|+.||...
T Consensus 223 ~~~DiwSlGvilyell~G~~Pf~~~ 247 (376)
T cd05598 223 QLCDWWSVGVILYEMLVGQPPFLAD 247 (376)
T ss_pred cceeeeeccceeeehhhCCCCCCCC
Confidence 9999999999999999999999753
No 179
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.3e-34 Score=309.97 Aligned_cols=257 Identities=21% Similarity=0.309 Sum_probs=186.6
Q ss_pred eeecccCceEEEEEEEcC--CCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEe
Q 002857 166 NLIGAGNFASVYKGILFE--GAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~--~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
+.||+|+||.||+|.+.. .+..+|+|.++.... .....+.+|+.++++++|+||+++++++. .....++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCT-----EVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----CCCCcEEEEE
Confidence 368999999999998753 345799998865432 23357889999999999999999999863 4456899999
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccc
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIA 322 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla 322 (873)
|+++|+|.++++... ......+++..++.++.|++.||+||| +.+++|+||||+||+++.++++||+|||++
T Consensus 76 ~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~ 147 (269)
T cd05087 76 FCPLGDLKGYLRSCR-----KAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLS 147 (269)
T ss_pred CCCCCcHHHHHHHhh-----hcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCcccc
Confidence 999999999995311 112335677788899999999999999 899999999999999999999999999999
Q ss_pred cccccccccccccccccccccCCCcccCCC-------CCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhc
Q 002857 323 RFLEATNEQTSSIGVKGTTGYIAPEYGMGH-------ETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 323 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-------~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
+...............++..|+|||++.+. .++.++||||||+++|||++ |+.||........ ....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~--~~~~--- 222 (269)
T cd05087 148 HNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV--LTYT--- 222 (269)
T ss_pred ccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH--HHHH---
Confidence 754332222222234567889999987642 35789999999999999996 9999965322110 0000
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
+....... ..|... . .....+.+++..|| .+|++|||+.||+..|+
T Consensus 223 --------~~~~~~~~-----------~~~~~~--~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 223 --------VREQQLKL-----------PKPRLK--L----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred --------hhcccCCC-----------CCCccC--C----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00000000 000000 0 01223667889999 58999999999998874
No 180
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.2e-35 Score=323.64 Aligned_cols=238 Identities=24% Similarity=0.293 Sum_probs=185.4
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHH-HHHhhhhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECE-VMRNIIHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~-iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.||+|+||.||+|++..+++.||||++.... ......+..|.. +++.++||||+++++.+ ...+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~-----~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE-----EeCCEEEEEE
Confidence 46999999999999999899999999986432 222344555555 56788999999999885 4567899999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|.+++. ....+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 76 e~~~~g~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~ 142 (323)
T cd05575 76 DYVNGGELFFHLQ----------RERSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGL 142 (323)
T ss_pred cCCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCC
Confidence 9999999999884 2446888899999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHH
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEE 401 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~e 401 (873)
++...... .......||..|+|||++.+..++.++|||||||++|||++|+.||...... +
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-----------------~ 203 (323)
T cd05575 143 CKEGIEHS--KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA-----------------E 203 (323)
T ss_pred CcccccCC--CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH-----------------H
Confidence 87532211 1223346899999999999999999999999999999999999999652111 1
Q ss_pred HhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHH
Q 002857 402 IVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIN 459 (873)
Q Consensus 402 lid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~ 459 (873)
+.+..+..... ..+. ....+.+++.+||+.+|++||++.
T Consensus 204 ~~~~i~~~~~~---------~~~~----------~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 204 MYDNILNKPLR---------LKPN----------ISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHcCCCC---------CCCC----------CCHHHHHHHHHHhhcCHHhCCCCC
Confidence 11111111000 0000 122477899999999999999986
No 181
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3.7e-35 Score=331.64 Aligned_cols=201 Identities=22% Similarity=0.332 Sum_probs=171.3
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.|+..++||+|+||.||+|+...+++.||+|++.... ......+.+|++++++++|+||+++++.+ ..++..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~-----~~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSF-----QDKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEE-----EeCCEE
Confidence 5888999999999999999999999999999986432 22345788999999999999999999985 456789
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
+|||||+++|+|.+++.. ...+++.....++.||+.||+||| +.+|+||||||+|||++.++.+||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~----------~~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~ 143 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIR----------MGIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLT 143 (382)
T ss_pred EEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEe
Confidence 999999999999999842 345788889999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccc---------------------------------------------cccccccccccccCCCcccCCC
Q 002857 318 DFGIARFLEATNE---------------------------------------------QTSSIGVKGTTGYIAPEYGMGH 352 (873)
Q Consensus 318 DFGla~~~~~~~~---------------------------------------------~~~~~~~~Gt~~Y~APE~l~~~ 352 (873)
|||+++.+..... ........||+.|+|||++.+.
T Consensus 144 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 223 (382)
T cd05625 144 DFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT 223 (382)
T ss_pred ECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC
Confidence 9999753311000 0001124689999999999999
Q ss_pred CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 353 ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 353 ~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
.++.++|||||||++|||++|+.||..
T Consensus 224 ~~~~~~DiwSlGvil~elltG~~Pf~~ 250 (382)
T cd05625 224 GYTQLCDWWSVGVILYEMLVGQPPFLA 250 (382)
T ss_pred CCCCeeeEEechHHHHHHHhCCCCCCC
Confidence 999999999999999999999999975
No 182
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.3e-34 Score=309.50 Aligned_cols=257 Identities=26% Similarity=0.417 Sum_probs=199.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCC---cEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGA---PAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g---~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.+|++.+.||+|+||.||+|.+..++ ..+|+|.++... ....+.+.+|+.++++++||||+++++++ ..++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKSK 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCC
Confidence 46888999999999999999876443 379999886432 22346789999999999999999999986 3456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++++|.+++.. ....+++.+++.|+.|++.||+||| +.+++||||||+|||++.++.++
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~---------~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~ 146 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRK---------HDGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCK 146 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEE
Confidence 78999999999999999852 2346899999999999999999999 89999999999999999999999
Q ss_pred Eecccccccccccccccc-ccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhh
Q 002857 316 VADFGIARFLEATNEQTS-SIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~-~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~ 393 (873)
|+|||+++.......... .....++..|+|||++.+..++.++||||||+++||+++ |..||....... ....+
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--~~~~~-- 222 (267)
T cd05066 147 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--VIKAI-- 222 (267)
T ss_pred eCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--HHHHH--
Confidence 999999987643322111 111223568999999998899999999999999999887 999986532110 11110
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
.+. . ..+... .++..+.+++.+||+.+|.+||+|.+|++.|+++
T Consensus 223 ---------~~~-~--------------~~~~~~-------~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 223 ---------EEG-Y--------------RLPAPM-------DCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ---------hCC-C--------------cCCCCC-------CCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 000 0 000000 1123477899999999999999999999999864
No 183
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.4e-34 Score=309.43 Aligned_cols=257 Identities=22% Similarity=0.293 Sum_probs=184.0
Q ss_pred eeecccCceEEEEEEEcC--CCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEe
Q 002857 166 NLIGAGNFASVYKGILFE--GAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~--~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
+.||+|+||.||+|.... ....+|+|.+..... .....+.+|+++++.++|+||+++++.+ ......++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~-----~~~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQC-----IESIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEE-----CCCCceEEEEE
Confidence 368999999999997643 335788888764332 2335688999999999999999999986 34567899999
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccc
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIA 322 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla 322 (873)
|+++|+|.+++.... .......++...+.++.||+.||+||| +.+|+||||||+|||+++++.+||+|||++
T Consensus 76 ~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~ 147 (269)
T cd05042 76 FCPLGDLKNYLRSNR-----GMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLA 147 (269)
T ss_pred eCCCCcHHHHHHhcc-----ccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccc
Confidence 999999999995411 112234567788999999999999999 899999999999999999999999999998
Q ss_pred cccccccccccccccccccccCCCcccCC-------CCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhc
Q 002857 323 RFLEATNEQTSSIGVKGTTGYIAPEYGMG-------HETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 323 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-------~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
+...............++..|+|||++.. ..++.++||||||+++|||++ |..||....... .+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~----- 221 (269)
T cd05042 148 LEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQ----- 221 (269)
T ss_pred cccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHH-----
Confidence 75433221111223345778999998643 456889999999999999999 788886432111 0000
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
.+.... ...+..... ......+.+++..|| .||++|||++||++.|.
T Consensus 222 -------~~~~~~-------------~~~~~~~~~----~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 222 -------VVREQD-------------IKLPKPQLD----LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred -------HhhccC-------------ccCCCCccc----ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 000000 000000000 011234567888888 59999999999999873
No 184
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-35 Score=317.54 Aligned_cols=249 Identities=23% Similarity=0.322 Sum_probs=204.4
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc---chhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD---ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~---~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
..+|++.+.||+|.||.|-+|.....|+.||||.+++.... ..-.+.+||+||+.|+||||+.++.+ |++.+
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV-----FENkd 126 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV-----FENKD 126 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh-----hcCCc
Confidence 34688889999999999999998889999999999754433 34468889999999999999999998 57888
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
...|||||..+|.|++|+. ..+.|++.+...+++||..|+.|.| +++++|||||.+|||||+++++|
T Consensus 127 KIvivMEYaS~GeLYDYiS----------er~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiK 193 (668)
T KOG0611|consen 127 KIVIVMEYASGGELYDYIS----------ERGSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIK 193 (668)
T ss_pred eEEEEEEecCCccHHHHHH----------HhccccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCee
Confidence 9999999999999999994 4678999999999999999999999 99999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCC-CcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET-SSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||++.++.... ....+.|++.|.+||++.+..| .+..|-|||||+||-|+.|..||++...
T Consensus 194 IADFGLSNly~~~k---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh------------ 258 (668)
T KOG0611|consen 194 IADFGLSNLYADKK---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH------------ 258 (668)
T ss_pred eeccchhhhhcccc---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH------------
Confidence 99999998875433 3345689999999999999887 5679999999999999999999987311
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
..++.+.-.+.+.+ ++. +....-|+.+||..||++|.|+.+|...-
T Consensus 259 -----k~lvrQIs~GaYrE---------P~~-----------PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 259 -----KRLVRQISRGAYRE---------PET-----------PSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred -----HHHHHHhhcccccC---------CCC-----------CchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 11222221121111 111 11244588999999999999999987643
No 185
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=6.9e-35 Score=321.50 Aligned_cols=194 Identities=27% Similarity=0.365 Sum_probs=165.1
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.||+|+||.||+|++..+++.||||+++... ......+..|..++..+ +||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTF-----QTKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEE-----EeCCEEEEEE
Confidence 46999999999999998889999999987432 23345567788888764 899999999985 4566799999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|.+++.. ...+++.++..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 76 ey~~~g~L~~~l~~----------~~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~ 142 (316)
T cd05619 76 EYLNGGDLMFHIQS----------CHKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGM 142 (316)
T ss_pred eCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCc
Confidence 99999999999842 346888899999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
++...... .......||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~ 198 (316)
T cd05619 143 CKENMLGD--AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred ceECCCCC--CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCC
Confidence 87532211 112234689999999999999999999999999999999999999965
No 186
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.1e-34 Score=315.88 Aligned_cols=205 Identities=22% Similarity=0.281 Sum_probs=162.7
Q ss_pred ceeecccCceEEEEEEEcC--CCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEe
Q 002857 165 ENLIGAGNFASVYKGILFE--GAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~--~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
.++||+|+||.||+|++.. +++.||+|.+.... ....+.+|+++|++++||||+++++++.. ..+...++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEec---CCCcEEEEEEe
Confidence 4689999999999998753 56789999986432 23567899999999999999999998642 33456899999
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee----CCCCCeEEec
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL----NDEMTACVAD 318 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL----d~~~~vKLsD 318 (873)
|+. ++|.+++...... ........+++..+..|+.||+.||+||| +.+|+||||||+|||+ +.++.+||+|
T Consensus 81 ~~~-~~l~~~~~~~~~~-~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07868 81 YAE-HDLWHIIKFHRAS-KANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred ccC-CCHHHHHHhcccc-cccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEee
Confidence 985 5888887431111 11122346889999999999999999999 8999999999999999 4567999999
Q ss_pred ccccccccccccc-ccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 319 FGIARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 319 FGla~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
||+++........ .......+|..|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 9999876433211 122335689999999998774 589999999999999999999999965
No 187
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.1e-35 Score=330.82 Aligned_cols=205 Identities=24% Similarity=0.327 Sum_probs=174.0
Q ss_pred HHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 155 LYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 155 l~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
+....++|++.+.||+|+||.||++++..+++.||+|++... .......+.+|+.+++.++||||+++++++
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~----- 112 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF----- 112 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----
Confidence 334457899999999999999999999989999999998632 222345688999999999999999999985
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
..+...++||||+++|+|.+++.. ..+++..+..++.||+.||+||| +.+|+||||||+|||++.+
T Consensus 113 ~~~~~~~lv~Ey~~gg~L~~~l~~-----------~~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~ 178 (370)
T cd05621 113 QDDKYLYMVMEYMPGGDLVNLMSN-----------YDVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKH 178 (370)
T ss_pred EcCCEEEEEEcCCCCCcHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCC
Confidence 556789999999999999999842 24788889999999999999999 8999999999999999999
Q ss_pred CCeEEeccccccccccccccccccccccccccCCCcccCCC----CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 312 MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH----ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~----~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+.+||+|||+++....... .......||..|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 179 ~~~kL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~ 249 (370)
T cd05621 179 GHLKLADFGTCMKMDETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 249 (370)
T ss_pred CCEEEEecccceecccCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence 9999999999986543221 112245699999999998754 378899999999999999999999965
No 188
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.4e-34 Score=313.44 Aligned_cols=199 Identities=25% Similarity=0.324 Sum_probs=171.2
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
|+..+.||+|+||+||+|.+..+++.||+|.+..... .....+.+|++++++++|+||+++.+.+ ..++..+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAY-----ETKDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEE-----ecCCEEE
Confidence 6677899999999999999998999999999864322 2234578899999999999999998885 4566799
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. .....+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|
T Consensus 77 lv~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~D 145 (285)
T cd05632 77 LVLTIMNGGDLKFHIYN--------MGNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISD 145 (285)
T ss_pred EEEEeccCccHHHHHHH--------hcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEec
Confidence 99999999999988843 22346899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
||++....... ......|+..|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 146 fg~~~~~~~~~---~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~ 203 (285)
T cd05632 146 LGLAVKIPEGE---SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRG 203 (285)
T ss_pred CCcceecCCCC---cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 99997653221 11234689999999999988999999999999999999999999975
No 189
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.4e-34 Score=306.57 Aligned_cols=250 Identities=26% Similarity=0.379 Sum_probs=195.3
Q ss_pred eeecccCceEEEEEEEcC-CCc--EEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFE-GAP--AVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~-~g~--~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
++||+|++|.||+|.+.. +++ .||||.+..... ...+.+.+|+.++++++|+||+++++++. . ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~-~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVL-----T-HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEc-----C-CeEEEEE
Confidence 468999999999999865 333 699999976555 45678999999999999999999999853 2 6789999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|.+++.. .....+++..++.++.|++.||+||| +.+++|+||||+||+++.++.+||+|||+
T Consensus 75 e~~~~~~L~~~l~~--------~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~ 143 (257)
T cd05040 75 ELAPLGSLLDRLRK--------DALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGL 143 (257)
T ss_pred EecCCCcHHHHHHh--------cccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccc
Confidence 99999999999853 11156899999999999999999999 89999999999999999999999999999
Q ss_pred cccccccccc-ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhH
Q 002857 322 ARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 322 a~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
++.+...... .......++..|+|||++.+..++.++||||||+++|||+| |+.||....... ....
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~--------- 212 (257)
T cd05040 144 MRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKK--------- 212 (257)
T ss_pred cccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH---------
Confidence 9876442211 11122347789999999998899999999999999999999 999986431111 0000
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
+ .. .. .....+ ...+..+.+++.+||+.+|++||++.+|++.|.
T Consensus 213 --~-~~---~~--------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 213 --I-DK---EG--------ERLERP---------EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --H-Hh---cC--------CcCCCC---------ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0 00 00 000000 011335788999999999999999999998874
No 190
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.1e-34 Score=316.27 Aligned_cols=276 Identities=20% Similarity=0.258 Sum_probs=197.8
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
++|.+.+.||+|+||.||+|.+..+++.||+|.++... ......+.+|+.++++++|+||+++++++ ......+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~-----~~~~~~~ 80 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSLT 80 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEE-----ecCCeEE
Confidence 57889999999999999999998889999999987443 22335678899999999999999999995 4456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||++ ++|.+++.. ....+++..+..++.||+.||+||| +.+|+|+||||+|||++.++.+||+|
T Consensus 81 lv~e~~~-~~l~~~l~~---------~~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~d 147 (301)
T cd07873 81 LVFEYLD-KDLKQYLDD---------CGNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLAD 147 (301)
T ss_pred EEEeccc-cCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECc
Confidence 9999997 589888842 2345788899999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||++........ ......++..|+|||++.+. .++.++||||||+++|||+||+.||...... .....+...+..
T Consensus 148 fg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~~~~~ 223 (301)
T cd07873 148 FGLARAKSIPTK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFRILGT 223 (301)
T ss_pred CcchhccCCCCC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCC
Confidence 999975432211 11223468899999987654 5788999999999999999999999753221 111111111111
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCc-h-hHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSS-T-QRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~-~-~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.........+.... ... ...+... . ...........+.+++.+||+.||.+|||+.||++
T Consensus 224 ~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 224 PTEETWPGILSNEE-----FKS-YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred CChhhchhhhcccc-----ccc-cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00011000000000 000 0000000 0 00000112335778999999999999999999876
No 191
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-34 Score=329.10 Aligned_cols=198 Identities=24% Similarity=0.280 Sum_probs=169.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcC--CCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFE--GAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~--~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
..+|.+.+.||+|+||.||++.... .+..||+|.+... +.+.+|+++|++++|+||+++++++ .....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAY-----RWKST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeE-----eeCCE
Confidence 3579999999999999999997643 4578999987532 3457899999999999999999985 44567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++|||++. ++|.+++. ....+++.+++.|+.||+.||.||| +.+|+||||||+|||++.++.+||
T Consensus 161 ~~lv~e~~~-~~l~~~l~----------~~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l 226 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVD----------RSGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVL 226 (392)
T ss_pred EEEEehhcC-CCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEE
Confidence 899999995 68888873 2456899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
+|||+++.+.............||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 227 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 290 (392)
T PHA03207 227 GDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGK 290 (392)
T ss_pred ccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 9999998665443333333456999999999999999999999999999999999999999653
No 192
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=3.6e-34 Score=303.11 Aligned_cols=251 Identities=21% Similarity=0.283 Sum_probs=198.1
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|++.+.||+|++|.||++.+..+++.||+|.+.... ....+.+.+|++++++++|+|++++++.+. ......+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE----GEDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec----CCCCEEE
Confidence 5888999999999999999998889999999986432 234467889999999999999999998742 2344689
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. .....+++.+++.++.+++.||+||| +.+|+||||||+||+++.++.++|+|
T Consensus 77 lv~e~~~~~~l~~~l~~--------~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~d 145 (257)
T cd08223 77 IVMGFCEGGDLYHKLKE--------QKGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGD 145 (257)
T ss_pred EEecccCCCcHHHHHHH--------hcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEec
Confidence 99999999999999853 22345899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||++........ ......++..|+|||++.+..++.++||||||++++||++|+.||....... ..
T Consensus 146 f~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~-----~~------- 211 (257)
T cd08223 146 LGIARVLENQCD--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS-----LV------- 211 (257)
T ss_pred ccceEEecccCC--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-----HH-------
Confidence 999986643221 2223457899999999999999999999999999999999999986421110 00
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+....+ +... ......+.+++.+||+.+|++|||+.+++.
T Consensus 212 -~~~~~~~~----------------~~~~------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 212 -YRIIEGKL----------------PPMP------KDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred -HHHHhcCC----------------CCCc------cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000 0000 011234778999999999999999999875
No 193
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.2e-35 Score=322.26 Aligned_cols=194 Identities=26% Similarity=0.346 Sum_probs=165.3
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
++||+|+||.||+|++..+++.||+|+++... ......+..|..++... +|+||+++++++ ...+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE-----EeCCEEEEEE
Confidence 46999999999999999899999999997432 23345667788888765 899999999985 4567899999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|.+++.. ...+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 76 E~~~~g~L~~~i~~----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~ 142 (316)
T cd05620 76 EFLNGGDLMFHIQD----------KGRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGM 142 (316)
T ss_pred CCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCC
Confidence 99999999998842 346888899999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
++...... .......||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~ 198 (316)
T cd05620 143 CKENVFGD--NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred CeecccCC--CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 87432211 122345689999999999999999999999999999999999999965
No 194
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2e-34 Score=306.03 Aligned_cols=255 Identities=26% Similarity=0.445 Sum_probs=200.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|.+.+.||+|+||.||+|.+. ++..||||.+..... ..+.+.+|+.++++++|+||+++++++ ......+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 77 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVC-----SEEEPIY 77 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeee-----ecCCceE
Confidence 467899999999999999999874 567899999874332 346799999999999999999999985 3446689
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. .....+++.++..++.|++.||.||| +.+|+|+||||+||++++++.+||+|
T Consensus 78 ~v~e~~~~~~L~~~i~~--------~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d 146 (261)
T cd05034 78 IVTEYMSKGSLLDFLKS--------GEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIAD 146 (261)
T ss_pred EEEeccCCCCHHHHHhc--------cccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECc
Confidence 99999999999999953 22346899999999999999999999 88999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||+++...... .........+..|+|||.+.+..++.++||||||+++|||+| |+.||....... ..
T Consensus 147 ~g~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~--------- 214 (261)
T cd05034 147 FGLARLIEDDE-YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE--VL--------- 214 (261)
T ss_pred cccceeccchh-hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HH---------
Confidence 99998654321 111112234678999999998889999999999999999999 999986521110 00
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
..+... +.. +.. ...+..+.+++.+||+.+|++||++.+|.+.|+.
T Consensus 215 --~~~~~~-~~~--------------~~~-------~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 215 --EQVERG-YRM--------------PRP-------PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --HHHHcC-CCC--------------CCC-------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 011000 000 000 0012357889999999999999999999998874
No 195
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-35 Score=335.34 Aligned_cols=260 Identities=23% Similarity=0.404 Sum_probs=211.3
Q ss_pred CcceeecccCceEEEEEEEcCCCc----EEEEEEeecc-CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 163 SSENLIGAGNFASVYKGILFEGAP----AVAIKVFNFL-HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~g~----~VAVK~l~~~-~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
...++||+|+||+||+|.|...++ +||||++... ..+...+++.|+-+|.+++|||+++++|+|.. ...
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~------s~~ 772 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCML------STL 772 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhccc------chH
Confidence 346899999999999999987665 6899988643 44456899999999999999999999999853 237
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
.||++||+.|+|.+|++. ....+-....+.|..|||+||.||| .+++|||||-++|||+..-.++||.
T Consensus 773 qlvtq~mP~G~LlDyvr~---------hr~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkit 840 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVRE---------HRDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKIT 840 (1177)
T ss_pred HHHHHhcccchHHHHHHH---------hhccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEE
Confidence 899999999999999964 3456777889999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||+++.+..+..........-.+.|||=|.+....++.++|||||||++||++| |..|++....++
T Consensus 841 dfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e------------ 908 (1177)
T KOG1025|consen 841 DFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE------------ 908 (1177)
T ss_pred ecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH------------
Confidence 9999999877665555444556788999999999999999999999999999999 999998753322
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhhhcC
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKLLET 475 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l~~~ 475 (873)
+.+++.. .+ .+ .. +.-|...+..++.+||..|++.||+++++...+.++.......
T Consensus 909 --I~dlle~---ge--------RL-sq---------PpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqry 964 (1177)
T KOG1025|consen 909 --IPDLLEK---GE--------RL-SQ---------PPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQRY 964 (1177)
T ss_pred --hhHHHhc---cc--------cC-CC---------CCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcceE
Confidence 1111110 00 00 01 1124556889999999999999999999999998875544433
No 196
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.4e-35 Score=326.51 Aligned_cols=239 Identities=23% Similarity=0.301 Sum_probs=188.1
Q ss_pred eeecccCceEEEEEEEc---CCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEE
Q 002857 166 NLIGAGNFASVYKGILF---EGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~---~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
+.||+|+||.||++... .+++.||+|+++.... .....+..|+++|++++||||+++++++ ..++..++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAF-----QTEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEE-----EcCCEEEEE
Confidence 67999999999998763 4678999999974322 2334577899999999999999999985 456789999
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccc
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFG 320 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFG 320 (873)
|||+++|+|.+++. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||
T Consensus 77 ~e~~~~~~L~~~l~----------~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg 143 (318)
T cd05582 77 LDFLRGGDLFTRLS----------KEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFG 143 (318)
T ss_pred EcCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeecc
Confidence 99999999999984 2346899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHH
Q 002857 321 IARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVE 400 (873)
Q Consensus 321 la~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~ 400 (873)
+++...... .......|+..|+|||++.+..++.++||||||+++|||+||+.||....... . ..
T Consensus 144 ~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~-----------~~ 208 (318)
T cd05582 144 LSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE--T-----------MT 208 (318)
T ss_pred CCcccCCCC--CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH--H-----------HH
Confidence 998643321 12223568999999999998889999999999999999999999997531110 0 01
Q ss_pred HHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHH
Q 002857 401 EIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIND 460 (873)
Q Consensus 401 elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~E 460 (873)
.+....+ ..|. .....+.+++.+||+.||++||++.+
T Consensus 209 ~i~~~~~--------------~~p~---------~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 209 MILKAKL--------------GMPQ---------FLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHcCCC--------------CCCC---------CCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1100000 0000 01224678999999999999999665
No 197
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.3e-34 Score=312.18 Aligned_cols=239 Identities=23% Similarity=0.332 Sum_probs=183.6
Q ss_pred eecccCceEEEEEEEcCC------------------------CcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceee
Q 002857 167 LIGAGNFASVYKGILFEG------------------------APAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKV 222 (873)
Q Consensus 167 ~LG~G~fG~VYkg~~~~~------------------------g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~l 222 (873)
+||+|+||.||+|.+..+ ...||+|++..........+.+|+.++++++|+||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 699999999999986321 23589999875544445678899999999999999999
Q ss_pred eeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCC
Q 002857 223 VTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIK 302 (873)
Q Consensus 223 lg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLK 302 (873)
+++|. .....++||||+++|+|..++.. ....+++..++.++.||++||+||| +.+|+|||||
T Consensus 82 ~~~~~-----~~~~~~lv~ey~~~g~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlk 144 (274)
T cd05076 82 HGVCV-----RGSENIMVEEFVEHGPLDVCLRK---------EKGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVC 144 (274)
T ss_pred EEEEE-----eCCceEEEEecCCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCC
Confidence 99974 35578999999999999998842 2456889999999999999999999 8999999999
Q ss_pred CCCeeeCCCC-------CeEEeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHH-hC
Q 002857 303 PSNILLNDEM-------TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMF-TG 373 (873)
Q Consensus 303 psNILLd~~~-------~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELl-TG 373 (873)
|+|||++..+ .+||+|||++...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|
T Consensus 145 p~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g 218 (274)
T cd05076 145 AKNILLARLGLAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDG 218 (274)
T ss_pred cccEEEeccCcccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999997643 3799999998643221 12246788999998875 56899999999999999985 69
Q ss_pred CCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcC
Q 002857 374 LRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPG 453 (873)
Q Consensus 374 k~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~ 453 (873)
+.||....... ....+.... ..|.. ....+.+++.+||+.+|+
T Consensus 219 ~~p~~~~~~~~--------------~~~~~~~~~--------------~~~~~---------~~~~~~~li~~cl~~~p~ 261 (274)
T cd05076 219 EVPLKERTPSE--------------KERFYEKKH--------------RLPEP---------SCKELATLISQCLTYEPT 261 (274)
T ss_pred CCCccccChHH--------------HHHHHHhcc--------------CCCCC---------CChHHHHHHHHHcccChh
Confidence 99986532111 001110000 00100 012477899999999999
Q ss_pred CCCCHHHHHHHH
Q 002857 454 ERMKINDVELGL 465 (873)
Q Consensus 454 eRPTm~EVl~~L 465 (873)
+||||.+|++.|
T Consensus 262 ~Rps~~~il~~L 273 (274)
T cd05076 262 QRPSFRTILRDL 273 (274)
T ss_pred hCcCHHHHHHhh
Confidence 999999999877
No 198
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3e-34 Score=308.70 Aligned_cols=201 Identities=21% Similarity=0.310 Sum_probs=168.7
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|++.+.||+|++|.||+|+...++..||||+++... ....+.+.+|+.++++++|+||+++++++ ..+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVL-----MQESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEE-----eeCCeEE
Confidence 4788899999999999999998889999999986432 22346788999999999999999999996 4466789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||++ ++|.+++.. ......+++..++.++.||+.||+||| +.+|+|+||||+|||++.++.+||+|
T Consensus 76 ~v~e~~~-~~l~~~~~~-------~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~d 144 (285)
T cd07861 76 LIFEFLS-MDLKKYLDS-------LPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLAD 144 (285)
T ss_pred EEEecCC-CCHHHHHhc-------CCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECc
Confidence 9999997 689888743 122356899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
||++....... .......++..|+|||++.+. .++.++||||||+++|||+||+.||..
T Consensus 145 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~ 204 (285)
T cd07861 145 FGLARAFGIPV--RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHG 204 (285)
T ss_pred ccceeecCCCc--ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 99997543221 111223468899999987654 578899999999999999999999975
No 199
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.7e-34 Score=308.84 Aligned_cols=274 Identities=22% Similarity=0.276 Sum_probs=199.4
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++|+||+++++++ ......
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVF-----RRKRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEE-----eeCCEE
Confidence 46888999999999999999998889999999986432 22335688999999999999999999985 446678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++++|..++. ....+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 76 ~~v~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~ 142 (286)
T cd07847 76 HLVFEYCDHTVLNELEK----------NPRGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLC 142 (286)
T ss_pred EEEEeccCccHHHHHHh----------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEEC
Confidence 99999999998888763 2345899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccch--hhHHHHhhc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNL--NLQNWVQSA 394 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~--~l~~~~~~~ 394 (873)
|||++........ ......++..|+|||++.+ ..++.++||||||+++|||++|+.||........ .........
T Consensus 143 dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 220 (286)
T cd07847 143 DFGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDL 220 (286)
T ss_pred ccccceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9999987644321 1122347889999999876 4578999999999999999999999975322111 001111111
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCc---hhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSS---TQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~---~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.. ...++.+..- +. .....|... ............+.+++.+||+.+|++||++.|++.
T Consensus 221 ~~-~~~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 221 IP-RHQQIFSTNQ---FF------KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred Ch-HHhhhccccc---cc------ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 10 1111110000 00 000000000 000011112345889999999999999999998864
No 200
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-34 Score=334.11 Aligned_cols=196 Identities=22% Similarity=0.303 Sum_probs=167.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
..+|.+.+.||+|+||.||+|.+...++.||||... ...+.+|+++|++++|+|||++++++ ..++..+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~-----~~~~~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVR-----VVGGLTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEE-----EECCEEE
Confidence 457999999999999999999998889999999632 23567899999999999999999986 3456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
||||++. ++|.+++.. ....+++.+++.|+.||+.||.||| +.+|+||||||+|||++.++.+||+|
T Consensus 237 lv~e~~~-~~L~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~D 303 (461)
T PHA03211 237 LVLPKYR-SDLYTYLGA---------RLRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGD 303 (461)
T ss_pred EEEEccC-CCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcc
Confidence 9999994 688888742 2346899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCC
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSD 378 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~ 378 (873)
||+++...............||..|+|||++.+..++.++|||||||+||||++|..++.
T Consensus 304 FGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 304 FGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred cCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 999986643322222234569999999999999999999999999999999999887643
No 201
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.4e-34 Score=317.15 Aligned_cols=199 Identities=27% Similarity=0.344 Sum_probs=171.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
++|++.+.||+|+||.||++.+..++..+|+|.++.... .....+.+|++++++++||||+++++++ ..++..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAF-----YSDGEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----eeCCEEE
Confidence 468999999999999999999988899999999864322 2335688999999999999999999986 4567899
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.++++. ...+++..+..++.||++||.|||+ ..+++|+||||+|||++.++.+||+|
T Consensus 76 lv~ey~~~~~L~~~l~~----------~~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~d 143 (308)
T cd06615 76 ICMEHMDGGSLDQVLKK----------AGRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCD 143 (308)
T ss_pred EEeeccCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEcc
Confidence 99999999999999842 3558888999999999999999993 25899999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
||++....... .....++..|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 144 fg~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~ 200 (308)
T cd06615 144 FGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200 (308)
T ss_pred CCCcccccccc----cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 99987543221 1234588999999999888899999999999999999999999864
No 202
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.6e-34 Score=311.00 Aligned_cols=274 Identities=22% Similarity=0.291 Sum_probs=199.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|+..++||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+++++.++|+||+++++++ ..+...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCCeE
Confidence 468889999999999999999988899999999864322 2345788999999999999999999985 456789
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++++|..+.. ....+++.+++.++.||+.||+||| +.+|+|+||+|+||++++++.++|+
T Consensus 76 ~lv~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~ 142 (286)
T cd07846 76 YLVFEFVDHTVLDDLEK----------YPNGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLC 142 (286)
T ss_pred EEEEecCCccHHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEE
Confidence 99999999999988763 2345899999999999999999999 8899999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccc--hhhHHHHhhc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDN--LNLQNWVQSA 394 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~--~~l~~~~~~~ 394 (873)
|||++........ ......++..|+|||++.+. .++.++||||||+++|||++|+.||....... ..+..+.. .
T Consensus 143 dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-~ 219 (286)
T cd07846 143 DFGFARTLAAPGE--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLG-N 219 (286)
T ss_pred eeeeeeeccCCcc--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhC-C
Confidence 9999986543321 12234578899999998763 57889999999999999999999986422110 00111111 1
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCc---hhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSS---TQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~---~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+........+..... .....+... ............+.+++.+||+.+|++||++.+|++
T Consensus 220 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 220 LIPRHQEIFQKNPLF---------AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred CchhhHHHhccchHh---------hccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 111111111100000 000001000 000001122346889999999999999999999875
No 203
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.6e-34 Score=304.40 Aligned_cols=252 Identities=22% Similarity=0.249 Sum_probs=201.1
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|+..+.||.|+||.||.++...+++.+++|.+.... ....+.+.+|++++++++|+||+++++++ ......+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHF-----MDDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEE-----ecCCeEE
Confidence 5888999999999999999998899999999986432 33456789999999999999999999996 4466799
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. .....+++.++..++.|++.||.||| +.+++|+||+|+||++++++.+||+|
T Consensus 76 ~~~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d 144 (256)
T cd08221 76 IEMEYANGGTLYDKIVR--------QKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGD 144 (256)
T ss_pred EEEEecCCCcHHHHHHh--------ccccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECc
Confidence 99999999999999853 22456889999999999999999999 88999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||++........ ......++..|+|||++.+..++.++||||||+++|||++|..||...... . .
T Consensus 145 ~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-----~--------~ 209 (256)
T cd08221 145 FGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-----N--------L 209 (256)
T ss_pred CcceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-----H--------H
Confidence 999986543321 222345899999999998888999999999999999999999998652110 0 0
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
...+. ..... +.. ......+.+++.+||+.+|++||++.|+++.+
T Consensus 210 ~~~~~----~~~~~-----------~~~-------~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 210 VVKIV----QGNYT-----------PVV-------SVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HHHHH----cCCCC-----------CCc-------cccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 11111 01000 000 01123477899999999999999999998753
No 204
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-34 Score=312.87 Aligned_cols=263 Identities=25% Similarity=0.265 Sum_probs=202.6
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
++|++.+.||+|+||+||++.+..+++.||+|++.... ....+.+.+|+++++.++|+||+++++++ ......+
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAF-----LNENNIC 79 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeE-----ecCCEEE
Confidence 46788899999999999999998889999999986443 23346789999999999999999999996 3456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. ...+++..+..++.+++.||.|||+ ..+++||||||+||++++++.++|+|
T Consensus 80 lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d 147 (284)
T cd06620 80 MCMEFMDCGSLDRIYKK----------GGPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCD 147 (284)
T ss_pred EEEecCCCCCHHHHHHh----------ccCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEcc
Confidence 99999999999998842 3458899999999999999999993 35899999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||++....... .....++..|+|||++.+..++.++|||||||++|+|+||+.||........ .......
T Consensus 148 ~gl~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~------~~~~~~~ 217 (284)
T cd06620 148 FGVSGELINSI----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDD------GQDDPMG 217 (284)
T ss_pred CCcccchhhhc----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhh------hhhhhhH
Confidence 99987542221 1234589999999999888999999999999999999999999976332211 0000001
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
+.+++...+.... +... . .+....+.+++.+||+.||++|||+.||+.+..
T Consensus 218 ~~~~~~~~~~~~~------------~~~~--~---~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 218 ILDLLQQIVQEPP------------PRLP--S---SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred HHHHHHHHhhccC------------CCCC--c---hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 1122221111100 0000 0 012345788999999999999999999988654
No 205
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.3e-34 Score=311.90 Aligned_cols=251 Identities=24% Similarity=0.313 Sum_probs=196.0
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
|+..+.||+|+||.||++.+..+++.||||.+..... .....+.+|+.++++++|+||+++++.+ ...+..+
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~ 76 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAY-----ETKDALC 76 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEE-----ecCCEEE
Confidence 6778999999999999999999999999999864322 1234577899999999999999999985 3456799
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. .....+++..++.++.|++.||.||| +.+|+||||||+||+++.++.++|+|
T Consensus 77 lv~e~~~g~~L~~~l~~--------~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~D 145 (285)
T cd05630 77 LVLTLMNGGDLKFHIYH--------MGEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISD 145 (285)
T ss_pred EEEEecCCCcHHHHHHH--------hcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEee
Confidence 99999999999998843 22345889999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||++........ .....|+..|+|||++.+..++.++||||||+++|||++|+.||....... ... .
T Consensus 146 fg~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~---------~ 212 (285)
T cd05630 146 LGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KRE---------E 212 (285)
T ss_pred ccceeecCCCcc---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHH---------H
Confidence 999976532221 123458999999999999999999999999999999999999997532110 000 0
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCC-----HHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMK-----INDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPT-----m~EVl~ 463 (873)
...+++... .. . + ......+.+++..||+.||++||| +.|+++
T Consensus 213 ~~~~~~~~~-~~---------~---~---------~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 213 VERLVKEVQ-EE---------Y---S---------EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HHhhhhhhh-hh---------c---C---------ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 011100000 00 0 0 001224678999999999999999 788775
No 206
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.4e-34 Score=308.29 Aligned_cols=258 Identities=26% Similarity=0.406 Sum_probs=193.2
Q ss_pred eeecccCceEEEEEEEcCCCc--EEEEEEeeccC-CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAP--AVAIKVFNFLH-HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~--~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.||+|+||.||+|++..++. .+|+|.++... ....+.+.+|++++.++ +||||+++++++. .....++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-----~~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HRGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe-----cCCCceEEE
Confidence 368999999999999877765 46888876432 33446788999999999 8999999999963 455689999
Q ss_pred eecCCCChhhhccccccccc------ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 242 EFMPNGSLEEWIHPITEEDK------RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~------~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
||+++|+|.+++........ .......+++.+++.++.|++.||+||| +.+++||||||+|||+++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEE
Confidence 99999999999854110000 0012245889999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+++..... ........+..|+|||++....++.++||||||+++|||++ |..||....... ..
T Consensus 153 l~dfgl~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~------ 221 (270)
T cd05047 153 IADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LY------ 221 (270)
T ss_pred ECCCCCccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH--HH------
Confidence 9999998632211 11111224567999999988889999999999999999997 999986421110 00
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
..+ ...... ..+. .+...+.+++.+||+.+|.+|||+.+|+..|+.+.
T Consensus 222 -----~~~-~~~~~~------------~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 222 -----EKL-PQGYRL------------EKPL---------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -----HHH-hCCCCC------------CCCC---------cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 000 000000 0000 11234789999999999999999999999998764
No 207
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2e-34 Score=310.22 Aligned_cols=266 Identities=23% Similarity=0.293 Sum_probs=204.6
Q ss_pred cCHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeec
Q 002857 150 VSYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSR 228 (873)
Q Consensus 150 ~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~ 228 (873)
.++.++..+...|++.+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.+++++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 456677778889999999999999999999998899999999986443 2345788899999999 79999999998743
Q ss_pred ccc-cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCee
Q 002857 229 VDY-QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNIL 307 (873)
Q Consensus 229 ~~~-~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNIL 307 (873)
... ......++||||+++|+|.+++.. .....+++..++.++.||+.||+||| +.+|+|+||+|+||+
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nil 153 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKN--------TKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVL 153 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHH--------ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEE
Confidence 211 234678999999999999999853 22345788889999999999999999 899999999999999
Q ss_pred eCCCCCeEEeccccccccccccccccccccccccccCCCcccC-----CCCCCcchhhHhHHHHHHHHHhCCCCCCcccc
Q 002857 308 LNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM-----GHETSSYGDVYSFGILLLEMFTGLRPSDDMFK 382 (873)
Q Consensus 308 Ld~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~ 382 (873)
+++++.++|+|||++........ ......++..|+|||.+. +..++.++||||||+++|||++|+.||.....
T Consensus 154 i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~ 231 (282)
T cd06636 154 LTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP 231 (282)
T ss_pred ECCCCCEEEeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH
Confidence 99999999999999875532211 122345889999999875 34678899999999999999999999865211
Q ss_pred cchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 383 DNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 383 ~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
... ...+... .+.... .......+.+++.+||+.||.+|||+.||+
T Consensus 232 ~~~-------------~~~~~~~-----------------~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~ell 277 (282)
T cd06636 232 MRA-------------LFLIPRN-----------------PPPKLK----SKKWSKKFIDFIEGCLVKNYLSRPSTEQLL 277 (282)
T ss_pred Hhh-------------hhhHhhC-----------------CCCCCc----ccccCHHHHHHHHHHhCCChhhCcCHHHHh
Confidence 100 0000000 000000 001233588999999999999999999986
Q ss_pred H
Q 002857 463 L 463 (873)
Q Consensus 463 ~ 463 (873)
+
T Consensus 278 ~ 278 (282)
T cd06636 278 K 278 (282)
T ss_pred c
Confidence 4
No 208
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1e-34 Score=320.89 Aligned_cols=199 Identities=25% Similarity=0.321 Sum_probs=168.8
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhh-hccceeeeeeeecccccCCce
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~ 236 (873)
+|+..+.||+|+||.||+|....+++.||+|+++.. .....+.+..|+.++..+. |++|+++++++ ...+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF-----QTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE-----ecCCE
Confidence 477889999999999999999889999999998743 2233456788999998886 56777788774 45667
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++. ....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~Ey~~~g~L~~~i~----------~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL 142 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQ----------QVGKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKI 142 (323)
T ss_pred EEEEEcCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEE
Confidence 999999999999999884 2356899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|||+++...... .......||..|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 143 ~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (323)
T cd05615 143 ADFGMCKEHMVDG--VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 203 (323)
T ss_pred eccccccccCCCC--ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCC
Confidence 9999987542221 112234589999999999998999999999999999999999999975
No 209
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.9e-34 Score=319.72 Aligned_cols=268 Identities=22% Similarity=0.345 Sum_probs=201.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCC-------CcEEEEEEeeccC-CcchhHHHHHHHHHHhh-hhccceeeeeeeeccc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEG-------APAVAIKVFNFLH-HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVD 230 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~-------g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~ 230 (873)
.+|.+.+.||+|+||.||+|.+... ...||+|+++... ....+.+.+|+++++++ +|+||++++++|.
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--- 88 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT--- 88 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc---
Confidence 4688899999999999999986432 2368999887432 22346789999999999 8999999999963
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccc------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCC
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEED------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPS 304 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKps 304 (873)
.....++||||+++|+|.++|....... ........+++.+++.++.||+.||+||| +.+|+||||||+
T Consensus 89 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~ 163 (334)
T cd05100 89 --QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAAR 163 (334)
T ss_pred --cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccc
Confidence 4557899999999999999985311100 00112345888999999999999999999 899999999999
Q ss_pred CeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCccccc
Q 002857 305 NILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKD 383 (873)
Q Consensus 305 NILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~ 383 (873)
|||++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.....+
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 243 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 243 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 99999999999999999986543222212222334568999999999999999999999999999998 88888642111
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+. ..+...... ..+ ..+...+.+++.+||+.+|++|||+.||++
T Consensus 244 -----~~~---------~~~~~~~~~------------~~~---------~~~~~~l~~li~~cl~~~p~~Rps~~ell~ 288 (334)
T cd05100 244 -----ELF---------KLLKEGHRM------------DKP---------ANCTHELYMIMRECWHAVPSQRPTFKQLVE 288 (334)
T ss_pred -----HHH---------HHHHcCCCC------------CCC---------CCCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 100 000000000 000 011235789999999999999999999999
Q ss_pred HHHHHHH
Q 002857 464 GLRLIKK 470 (873)
Q Consensus 464 ~Le~i~~ 470 (873)
.|+.+..
T Consensus 289 ~l~~~~~ 295 (334)
T cd05100 289 DLDRVLT 295 (334)
T ss_pred HHHHHhh
Confidence 9998864
No 210
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.9e-34 Score=313.10 Aligned_cols=250 Identities=21% Similarity=0.289 Sum_probs=200.2
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
.+|+..+.||.|+||.||+|....+++.||+|.+........+.+.+|+++++.++|+||+++++++ ......++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSF-----LVGDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeE-----ecCceEEE
Confidence 4689999999999999999999889999999999765555567889999999999999999999986 44667999
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++++|.+++.. ..+++.+++.++.|++.||+||| +.+++|+||||+||+++.++.+||+||
T Consensus 94 v~e~~~~~~L~~~~~~-----------~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~df 159 (296)
T cd06655 94 VMEYLAGGSLTDVVTE-----------TCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDF 159 (296)
T ss_pred EEEecCCCcHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccC
Confidence 9999999999998832 34889999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
|++......... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||........ . ..+.....
T Consensus 160 g~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~-~~~~~~~~--- 232 (296)
T cd06655 160 GFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-L-YLIATNGT--- 232 (296)
T ss_pred ccchhccccccc--CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H-HHHHhcCC---
Confidence 998865433221 1234588899999999988899999999999999999999999965321110 0 00000000
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+.+ ..+ ......+.+++.+||+.+|++|||+.+|+.
T Consensus 233 -----~~~--------------~~~---------~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 233 -----PEL--------------QNP---------EKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -----ccc--------------CCc---------ccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000 000 011234778999999999999999999874
No 211
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.1e-34 Score=310.39 Aligned_cols=250 Identities=23% Similarity=0.290 Sum_probs=194.8
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
|++.+.||+|+||.||+|.+..++..+|+|.+........+.+.+|+++++.++|+||+++++++ ..+...++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~-----~~~~~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF-----YYENNLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEE-----eeCCEEEEEE
Confidence 56678999999999999999888999999998755545567789999999999999999999986 3456789999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++++|..++.. ....+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 82 e~~~~~~l~~~~~~---------~~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~ 149 (282)
T cd06643 82 EFCAGGAVDAVMLE---------LERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGV 149 (282)
T ss_pred EecCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccc
Confidence 99999999988742 2346899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccC-----CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGM-----GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+....... .......++..|+|||++. +..++.++|||||||++|||++|+.||........ .
T Consensus 150 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~--------- 217 (282)
T cd06643 150 SAKNTRTI--QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV-L--------- 217 (282)
T ss_pred cccccccc--cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH-H---------
Confidence 87543221 1122345889999999874 34578899999999999999999999865221110 0
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+.. ... +..... ......+.+++.+||+.+|.+||++.+|++
T Consensus 218 ---~~~~~----~~~------------~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 218 ---LKIAK----SEP------------PTLAQP----SRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ---HHHhh----cCC------------CCCCCc----cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000 000 000000 001234778999999999999999998753
No 212
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.8e-34 Score=305.00 Aligned_cols=250 Identities=24% Similarity=0.357 Sum_probs=195.7
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcc---------hhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDA---------SKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~---------~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
+|.+...||+|++|.||+|....+++.||+|.+....... .+.+.+|+.++++++|+||+++++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~----- 75 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSS----- 75 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----
Confidence 4677889999999999999988888999999886433221 24688899999999999999999985
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
......++||||+++++|.+++.. ...+++..+..++.|++.||+||| +.+++||||+|+||+++++
T Consensus 76 ~~~~~~~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~ 142 (267)
T cd06628 76 LDADHLNIFLEYVPGGSVAALLNN----------YGAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNK 142 (267)
T ss_pred EeCCccEEEEEecCCCCHHHHHHh----------ccCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCC
Confidence 345678999999999999999842 345788899999999999999999 8999999999999999999
Q ss_pred CCeEEeccccccccccccccc----cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhh
Q 002857 312 MTACVADFGIARFLEATNEQT----SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNL 387 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~----~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l 387 (873)
+.+||+|||+++......... ......++..|+|||++.+..++.++||||||+++|+|++|+.||.......
T Consensus 143 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--- 219 (267)
T cd06628 143 GGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ--- 219 (267)
T ss_pred CCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH---
Confidence 999999999998664321111 1112347889999999998889999999999999999999999997521100
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
....+..... +... ......+.+++.+||+.+|++||++.||++
T Consensus 220 ----------~~~~~~~~~~----------------~~~~------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 220 ----------AIFKIGENAS----------------PEIP------SNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ----------HHHHHhccCC----------------CcCC------cccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0000000000 0000 011234778999999999999999999875
No 213
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.7e-34 Score=307.40 Aligned_cols=240 Identities=25% Similarity=0.351 Sum_probs=184.8
Q ss_pred eeecccCceEEEEEEEcCC------------CcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccC
Q 002857 166 NLIGAGNFASVYKGILFEG------------APAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~------------g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
+.||+|+||.||+|++... ...||+|++..........+.+|+.+++.++||||+++++++. .
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~-----~ 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCV-----R 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEe-----c
Confidence 3689999999999986422 2358999987655555567899999999999999999999963 3
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
+...++||||+++|+|..+++. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~ 143 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHR---------KSDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGI 143 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCc
Confidence 4567999999999999988842 2345899999999999999999999 899999999999999987654
Q ss_pred -------eEEeccccccccccccccccccccccccccCCCcccC-CCCCCcchhhHhHHHHHHHHH-hCCCCCCcccccc
Q 002857 314 -------ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM-GHETSSYGDVYSFGILLLEMF-TGLRPSDDMFKDN 384 (873)
Q Consensus 314 -------vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-~~~~s~ksDVwSfGvvL~ELl-TGk~Pf~~~~~~~ 384 (873)
++++|||++...... ....++..|+|||++. +..++.++|||||||++|||+ +|..||.......
T Consensus 144 ~~~~~~~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~ 217 (262)
T cd05077 144 DGECGPFIKLSDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE 217 (262)
T ss_pred cCCCCceeEeCCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH
Confidence 899999998754321 1234788999999886 467899999999999999998 5888875421100
Q ss_pred hhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 385 LNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 385 ~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
...+....... ..+ ....+.+|+.+||+.||.+||++.+|++.
T Consensus 218 --------------~~~~~~~~~~~------------~~~-----------~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 218 --------------KERFYEGQCML------------VTP-----------SCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred --------------HHHHHhcCccC------------CCC-----------ChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 00000000000 000 02347789999999999999999999887
Q ss_pred H
Q 002857 465 L 465 (873)
Q Consensus 465 L 465 (873)
|
T Consensus 261 ~ 261 (262)
T cd05077 261 I 261 (262)
T ss_pred c
Confidence 6
No 214
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.2e-35 Score=323.87 Aligned_cols=241 Identities=24% Similarity=0.289 Sum_probs=186.8
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHH-HHHhhhhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECE-VMRNIIHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~-iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.||+|+||.||+|+...+++.||+|++... .......+..|.. +++.++||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE-----ecCCEEEEEE
Confidence 4699999999999999889999999998643 1223345556655 46778999999999885 4567899999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|..++. ....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 76 e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~ 142 (325)
T cd05604 76 DFVNGGELFFHLQ----------RERSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGL 142 (325)
T ss_pred cCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCC
Confidence 9999999998883 2456889999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHH
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEE 401 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~e 401 (873)
++...... .......||..|+|||++.+..++.++|||||||++|||++|+.||...... +
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----------------~ 203 (325)
T cd05604 143 CKEGIAQS--DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-----------------E 203 (325)
T ss_pred cccCCCCC--CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-----------------H
Confidence 87532211 1223456899999999999999999999999999999999999999652111 1
Q ss_pred HhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 402 IVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 402 lid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
+.+..+.... ...+. ....+.+++.+|++.+|.+||++.+.+
T Consensus 204 ~~~~~~~~~~---------~~~~~----------~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 204 MYDNILHKPL---------VLRPG----------ASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred HHHHHHcCCc---------cCCCC----------CCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 1111111100 00010 012467899999999999999986443
No 215
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.7e-34 Score=308.07 Aligned_cols=255 Identities=26% Similarity=0.398 Sum_probs=193.8
Q ss_pred eeecccCceEEEEEEEcCCC------cEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 166 NLIGAGNFASVYKGILFEGA------PAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g------~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+.||+|+||.||+|++.... ..+|||.+.... ......+.+|+.++++++|+||+++++++ ......+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVC-----LLNEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeee-----cCCCCeE
Confidence 46999999999999875433 689999876432 23456789999999999999999999986 3455689
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC-----C
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM-----T 313 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~-----~ 313 (873)
+||||+++++|.+++..... .......+++.+++.++.||+.||+||| +.+++|+||||+||+++.+. .
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~ 149 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARV---ERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRV 149 (269)
T ss_pred EEEeccCCCcHHHHHHHhhh---cccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcc
Confidence 99999999999999954111 0113345889999999999999999999 89999999999999999877 8
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~ 392 (873)
++|+|||+++...............++..|+|||++.+..++.++||||||+++|||+| |+.||..... ......+
T Consensus 150 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~~- 226 (269)
T cd05044 150 VKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQHV- 226 (269)
T ss_pred eEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHHH-
Confidence 99999999976533222111222345788999999999999999999999999999998 9999864211 1111100
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
.... . . ..+ ......+.+++.+||+.+|++||++.+|++.|+
T Consensus 227 -----------~~~~--~---------~-~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 227 -----------TAGG--R---------L-QKP---------ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred -----------hcCC--c---------c-CCc---------ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0000 0 0 000 011335788999999999999999999999886
No 216
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-34 Score=322.93 Aligned_cols=193 Identities=24% Similarity=0.359 Sum_probs=164.3
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
...+|.+.+.||+|+||.||+|++..+++.||+|+... .....|+.++++++|+||+++++++ ......
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 132 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTL-----VSGAIT 132 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheE-----EeCCee
Confidence 44689999999999999999999988889999998532 2345699999999999999999986 345678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+. ++|.+++.. ....+++..++.|+.||+.||.||| +.+|+||||||+|||++.++.+||+
T Consensus 133 ~lv~e~~~-~~l~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~ 199 (357)
T PHA03209 133 CMVLPHYS-SDLYTYLTK---------RSRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIG 199 (357)
T ss_pred EEEEEccC-CcHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEe
Confidence 99999994 688888742 3456899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCC
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPS 377 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf 377 (873)
|||+++..... .......||..|+|||++.+..++.++|||||||++|||+++..++
T Consensus 200 DfG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 200 DLGAAQFPVVA---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cCccccccccC---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 99999753221 1122356899999999999999999999999999999999865553
No 217
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.5e-34 Score=309.56 Aligned_cols=271 Identities=18% Similarity=0.247 Sum_probs=195.3
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++|+||+++++++ .+....+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL-----HSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh-----ccCCceE
Confidence 4788899999999999999999899999999986432 22235678899999999999999999984 4566789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+|+||+. ++|.+++.. ....+++..++.++.||++||.||| +.+|+||||||+||+++.++.+||+|
T Consensus 76 lv~e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d 142 (284)
T cd07839 76 LVFEYCD-QDLKKYFDS---------CNGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLAD 142 (284)
T ss_pred EEEecCC-CCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECc
Confidence 9999996 588887742 2356899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||+++....... ......++..|+|||++.+. .++.++||||||+++|||+||..|+.........+..........
T Consensus 143 fg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~ 220 (284)
T cd07839 143 FGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 220 (284)
T ss_pred cchhhccCCCCC--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCC
Confidence 999986533221 11233578899999988765 478999999999999999999998644222111111110000000
Q ss_pred ---hH---HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 398 ---RV---EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 398 ---~l---~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.. .++.+.. .....+......+........+.+++.+||+.||.+|||+.|++.
T Consensus 221 ~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 221 TEESWPGVSKLPDYK------------PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ChHHhHHhhhccccc------------ccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00 0000000 000000000000111112345778999999999999999999865
No 218
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.9e-34 Score=302.13 Aligned_cols=248 Identities=28% Similarity=0.410 Sum_probs=193.6
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeec
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFM 244 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~ 244 (873)
++||+|+||.||++.+.. ++.||+|+++..... ....+.+|++++++++|+||+++++++ ......++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC-----VQKQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEE-----ecCCCeEEEEEcC
Confidence 469999999999999866 899999998754433 446799999999999999999999986 4456789999999
Q ss_pred CCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 245 PNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 245 ~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
++++|.+++.. ....+++..++.++.+++.||+||| +.+++||||||+|||++.++.+||+|||+++.
T Consensus 75 ~~~~l~~~l~~---------~~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~ 142 (251)
T cd05041 75 PGGSLLTFLRK---------KKNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRE 142 (251)
T ss_pred CCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeecccccc
Confidence 99999999842 2335788899999999999999999 89999999999999999999999999999986
Q ss_pred cccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhHHHHh
Q 002857 325 LEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERVEEIV 403 (873)
Q Consensus 325 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l~eli 403 (873)
...............+..|+|||++.+..++.++||||||+++|||+| |..||....... ..+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~--------------~~~~~ 208 (251)
T cd05041 143 EEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ--------------TRERI 208 (251)
T ss_pred ccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH--------------HHHHH
Confidence 542221111112234667999999988899999999999999999999 888886532110 01111
Q ss_pred hhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 404 DTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 404 d~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
...... ..+ ......+.+++.+||+.+|++|||+.||++.|+
T Consensus 209 ~~~~~~------------~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 209 ESGYRM------------PAP---------QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred hcCCCC------------CCC---------ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 100000 000 011235888999999999999999999999886
No 219
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.8e-35 Score=328.60 Aligned_cols=252 Identities=19% Similarity=0.260 Sum_probs=207.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--chhHHHHHHHHHHhhhhccceeeeeeeecccccCCce-
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF- 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~- 236 (873)
++|...+++|+|+||.++..+++.+++.+|+|.+...... ..+...+|+.++++++|||||.+.+.+ ..++.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~-----~~~~~~ 78 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSF-----EEDGQL 78 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccch-----hcCCce
Confidence 5788899999999999999999999999999998754432 334688999999999999999999984 44555
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||+|++||+|.+.|.. .+...+++..+..++.|++.|+.||| +..|+|||||+.||+++.+..+||
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~--------~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkL 147 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKE--------QKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKL 147 (426)
T ss_pred EEEEEeecCCCCHHHHHHH--------HhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceee
Confidence 9999999999999999964 33567899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||+|+.+.... .....+.||+.|+.||++.+.+|..|+|||||||++|||++-+++|....
T Consensus 148 gDfGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~--------------- 210 (426)
T KOG0589|consen 148 GDFGLAKILNPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN--------------- 210 (426)
T ss_pred cchhhhhhcCCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc---------------
Confidence 9999999886544 23345789999999999999999999999999999999999999997631
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
+..++........ .|.... ...++..++..||+.+|..||++.+++.+
T Consensus 211 --m~~Li~ki~~~~~-----------~Plp~~-------ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 211 --MSELILKINRGLY-----------SPLPSM-------YSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred --hHHHHHHHhhccC-----------CCCCcc-------ccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1122222111110 011111 12347789999999999999999999987
No 220
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=4.4e-34 Score=305.28 Aligned_cols=204 Identities=25% Similarity=0.395 Sum_probs=171.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-----cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-----DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-----~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.+|+..+.||+|+||.||+|....++..||+|++..... .....+.+|+.++++++|+||+++++++.. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD---RAE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc---CCC
Confidence 478899999999999999999988899999999864321 223568889999999999999999998632 224
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...+++|||+++++|.+++.. ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~ 145 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKA----------YGALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNV 145 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCE
Confidence 568899999999999999842 345788899999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccc-cccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 315 CVADFGIARFLEATNE-QTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 315 KLsDFGla~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
||+|||+++....... ........++..|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~ 211 (266)
T cd06651 146 KLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAE 211 (266)
T ss_pred EEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccc
Confidence 9999999976532211 1111224578899999999998899999999999999999999999965
No 221
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3.4e-34 Score=307.20 Aligned_cols=249 Identities=26% Similarity=0.320 Sum_probs=199.2
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
++|+..+.||.|++|.||+|++..+++.||+|++.... ......+.+|+++++.++|+||+++++++ .++...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSF-----LKGSKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEE-----EECCeEE
Confidence 36888899999999999999998899999999987543 33446788999999999999999999985 3456799
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+|+||+++++|.+++.. ..+++..++.++.|++.||.||| +.+++|+||+|+||++++++.++|+|
T Consensus 76 ~v~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d 141 (274)
T cd06609 76 IIMEYCGGGSCLDLLKP-----------GKLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLAD 141 (274)
T ss_pred EEEEeeCCCcHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcc
Confidence 99999999999999842 26889999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||+++....... ......++..|+|||++.+..++.++||||||+++|||+||+.||....... ..
T Consensus 142 ~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~--~~---------- 207 (274)
T cd06609 142 FGVSGQLTSTMS--KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR--VL---------- 207 (274)
T ss_pred cccceeeccccc--ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH--HH----------
Confidence 999987654321 1223457889999999999889999999999999999999999996532110 00
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+..... +.... . .....+.+++.+||..+|++|||+++|+.
T Consensus 208 --~~~~~~~~---------------~~~~~-~----~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 208 --FLIPKNNP---------------PSLEG-N----KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred --HHhhhcCC---------------CCCcc-c----ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 00000000 00000 0 01234778999999999999999999876
No 222
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.7e-34 Score=304.22 Aligned_cols=250 Identities=22% Similarity=0.262 Sum_probs=199.4
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|++.+.||+|+||.||++....+++.||+|.+.... ....+++.+|+.++++++|+||+++++++ ...+..+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence 4788999999999999999998899999999987432 23346789999999999999999999985 4567899
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. .....+++.+++.++.|++.||.||| +.+++|+||+|+|||++.++.++|+|
T Consensus 76 lv~e~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d 144 (256)
T cd08218 76 IVMDYCEGGDLYKKINA--------QRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGD 144 (256)
T ss_pred EEEecCCCCcHHHHHHh--------ccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEee
Confidence 99999999999998853 22345788899999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||++........ ......++..|+|||++.+..++.++||||||+++++|++|+.||.....
T Consensus 145 ~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---------------- 206 (256)
T cd08218 145 FGIARVLNSTVE--LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM---------------- 206 (256)
T ss_pred ccceeecCcchh--hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH----------------
Confidence 999986543221 11234578899999999988999999999999999999999999864211
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.++++..+..... ..+ ......+.+++.+||+.+|++||++.||++
T Consensus 207 -~~~~~~~~~~~~~---------~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 207 -KNLVLKIIRGSYP---------PVS---------SHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred -HHHHHHHhcCCCC---------CCc---------ccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 1111111111100 000 011235788999999999999999999986
No 223
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.3e-34 Score=313.79 Aligned_cols=251 Identities=22% Similarity=0.255 Sum_probs=199.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
..+|++.+.||+|+||.||+|....+++.||+|.+........+.+.+|+.+++.++|+||+++++++ ..+...+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 92 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY-----LVGDELW 92 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCEEE
Confidence 36789999999999999999998888999999999765555567789999999999999999999986 4466789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. ..+++.++..++.|++.||.||| +.+|+||||||+|||++.++.++|+|
T Consensus 93 lv~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~D 158 (297)
T cd06656 93 VVMEYLAGGSLTDVVTE-----------TCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTD 158 (297)
T ss_pred EeecccCCCCHHHHHHh-----------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECc
Confidence 99999999999999842 34788899999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||++........ ......++..|+|||.+.+..++.++||||||+++|+|++|+.||............ .
T Consensus 159 fg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~-~------- 228 (297)
T cd06656 159 FGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-A------- 228 (297)
T ss_pred CccceEccCCcc--CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee-c-------
Confidence 999876533221 112345788999999999888999999999999999999999999652111100000 0
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.... +.... .......+.+++.+||+.+|++||++.+|+.
T Consensus 229 --------~~~~-------------~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 229 --------TNGT-------------PELQN----PERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred --------cCCC-------------CCCCC----ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 00000 0011234678999999999999999999876
No 224
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.5e-34 Score=305.97 Aligned_cols=256 Identities=22% Similarity=0.344 Sum_probs=197.5
Q ss_pred CCCcceeecccCceEEEEEEEcC-CCcEEEEEEeeccC----------CcchhHHHHHHHHHHh-hhhccceeeeeeeec
Q 002857 161 GFSSENLIGAGNFASVYKGILFE-GAPAVAIKVFNFLH----------HDASKSFTVECEVMRN-IIHRKIIKVVTACSR 228 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~-~g~~VAVK~l~~~~----------~~~~~~f~~Ei~iL~~-L~HpNIV~llg~c~~ 228 (873)
+|++.+.||+|+||.||+|.+.. +++.+|+|.+.... ......+..|+.++.+ ++|+||+++++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~-- 78 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF-- 78 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE--
Confidence 47888999999999999999877 67899999875321 1223457788888875 7999999999986
Q ss_pred ccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 229 VDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 229 ~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
..++..++||||+++++|.+++.... .....+++..++.++.|++.||.|||+ ..+|+|+||+|+||++
T Consensus 79 ---~~~~~~~lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~ 147 (269)
T cd08528 79 ---LENDRLYIVMDLIEGAPLGEHFNSLK------EKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIML 147 (269)
T ss_pred ---ccCCeEEEEEecCCCCcHHHHHHHHH------hccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEE
Confidence 45678999999999999999884311 224568889999999999999999993 2689999999999999
Q ss_pred CCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhH
Q 002857 309 NDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 309 d~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~ 388 (873)
+.++.+||+|||++....... ......++..|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 148 ~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~----- 219 (269)
T cd08528 148 GEDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML----- 219 (269)
T ss_pred CCCCcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH-----
Confidence 999999999999998654332 223345889999999999888999999999999999999999998642110
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
.. ...+.+.... +... ......+.+++.+||+.||++||++.||.++|+
T Consensus 220 ~~--------~~~~~~~~~~---------------~~~~------~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 220 SL--------ATKIVEAVYE---------------PLPE------GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HH--------HHHHhhccCC---------------cCCc------ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 00 0011110000 0000 001234778999999999999999999999885
No 225
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=7.1e-35 Score=322.05 Aligned_cols=241 Identities=24% Similarity=0.285 Sum_probs=185.5
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHH-HHHhhhhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECE-VMRNIIHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~-iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.||+|+||.||+|++..+++.||+|++.... ......+..|.. +++.++|+||+++++++ ...+..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE-----EcCCeEEEEE
Confidence 46999999999999998899999999986432 122234444444 56788999999999885 4567799999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|.+++.. ...+++.....++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 76 e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~ 142 (325)
T cd05602 76 DYINGGELFYHLQR----------ERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGL 142 (325)
T ss_pred eCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCC
Confidence 99999999999842 345778888899999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHH
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEE 401 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~e 401 (873)
++...... .......||..|+|||++.+..++.++|||||||++|||++|+.||....... . ...
T Consensus 143 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~-----------~~~ 207 (325)
T cd05602 143 CKENIEHN--GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE--M-----------YDN 207 (325)
T ss_pred CcccccCC--CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH--H-----------HHH
Confidence 97542211 12233568999999999999999999999999999999999999996521110 0 011
Q ss_pred HhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 402 IVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 402 lid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
+....+. ..+ .....+.+++.+||+.+|.+||++.+.+
T Consensus 208 i~~~~~~-------------~~~----------~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 208 ILNKPLQ-------------LKP----------NITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred HHhCCcC-------------CCC----------CCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 1110000 000 0122467899999999999999987543
No 226
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=8e-34 Score=310.76 Aligned_cols=205 Identities=22% Similarity=0.289 Sum_probs=162.4
Q ss_pred ceeecccCceEEEEEEEcC--CCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEe
Q 002857 165 ENLIGAGNFASVYKGILFE--GAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~--~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
..+||+|+||.||+|+... .+..||+|.+.... ....+.+|++++++++|+||+++++++.. ..+...++|||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLS---HSDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEec---cCCCeEEEEEe
Confidence 3689999999999998754 45789999986432 23567899999999999999999998743 34557899999
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee----CCCCCeEEec
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL----NDEMTACVAD 318 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL----d~~~~vKLsD 318 (873)
|+.+ +|.+++...... ........+++..++.|+.||+.||.||| +.+|+||||||+|||+ +.++.+||+|
T Consensus 81 ~~~~-~l~~~~~~~~~~-~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07867 81 YAEH-DLWHIIKFHRAS-KANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eeCC-cHHHHHHhhhcc-ccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEee
Confidence 9864 788777421111 01122346888999999999999999999 8999999999999999 5667999999
Q ss_pred ccccccccccccc-ccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 319 FGIARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 319 FGla~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
||+++........ .......+|..|+|||++.+. .++.++|||||||++|||+||+.||..
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 9999876433211 122234689999999998764 579999999999999999999999975
No 227
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.1e-34 Score=310.00 Aligned_cols=252 Identities=24% Similarity=0.283 Sum_probs=197.0
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
+.|++.++||+|+||.||+|++..+++.||+|++........+.+.+|+++++.++|+||+++++.+ ..+...++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAF-----YWDGKLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEE-----EeCCeEEE
Confidence 5688899999999999999999888999999999766555567889999999999999999999985 34567899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++++|..++.. ....+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 87 v~e~~~~~~l~~~~~~---------~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~df 154 (292)
T cd06644 87 MIEFCPGGAVDAIMLE---------LDRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADF 154 (292)
T ss_pred EEecCCCCcHHHHHHh---------hcCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccC
Confidence 9999999999988742 2345899999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccC-----CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGM-----GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|++....... .......++..|+|||++. ...++.++|||||||++|||++|+.||....... ..
T Consensus 155 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~------- 224 (292)
T cd06644 155 GVSAKNVKTL--QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VL------- 224 (292)
T ss_pred ccceeccccc--cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH-HH-------
Confidence 9987542221 1122345788999999885 3456889999999999999999999986521100 00
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+... . .+.... .......+.+++.+||+.+|++||++.||++
T Consensus 225 -----~~~~~~----~------------~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 225 -----LKIAKS----E------------PPTLSQ----PSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred -----HHHhcC----C------------CccCCC----CcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000 0 000000 0011224778999999999999999998865
No 228
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3e-34 Score=303.67 Aligned_cols=239 Identities=26% Similarity=0.380 Sum_probs=187.0
Q ss_pred eeecccCceEEEEEEEcCCC----------cEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 166 NLIGAGNFASVYKGILFEGA----------PAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g----------~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
+.||+|+||.||+|.+...+ ..|++|++...... ...+.+|+.++++++|+||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence 46999999999999997665 35888887644333 5789999999999999999999998642 4
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC---
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM--- 312 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~--- 312 (873)
..++||||+++|+|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~ 141 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHR---------EKNNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNE 141 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHh---------hccCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCcccc
Confidence 56899999999999999853 2226889999999999999999999 89999999999999999887
Q ss_pred ----CeEEeccccccccccccccccccccccccccCCCcccCCC--CCCcchhhHhHHHHHHHHHh-CCCCCCcccccch
Q 002857 313 ----TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH--ETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNL 385 (873)
Q Consensus 313 ----~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~ 385 (873)
.+||+|||++..... .....++..|+|||++.+. .++.++||||||+++|||++ |..||.......
T Consensus 142 ~~~~~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~- 214 (259)
T cd05037 142 GYVPFIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE- 214 (259)
T ss_pred CCceeEEeCCCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh-
Confidence 799999999986533 1123467789999998876 78999999999999999999 577765431110
Q ss_pred hhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 386 NLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 386 ~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
...+.. .... ...+. ...+.+++.+||+.+|.+|||+.||++.|
T Consensus 215 -~~~~~~-----------~~~~-------------~~~~~-----------~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 215 -KERFYQ-----------DQHR-------------LPMPD-----------CAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred -HHHHHh-----------cCCC-------------CCCCC-----------chHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 000000 0000 00000 13478899999999999999999999877
Q ss_pred H
Q 002857 466 R 466 (873)
Q Consensus 466 e 466 (873)
+
T Consensus 259 ~ 259 (259)
T cd05037 259 N 259 (259)
T ss_pred C
Confidence 3
No 229
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=6.9e-35 Score=321.37 Aligned_cols=194 Identities=25% Similarity=0.330 Sum_probs=162.7
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHH-HHHhhhhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECE-VMRNIIHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~-iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
++||+|+||.||+|++..+++.||+|++.... ......+..|.. +++.++|+||+++++++ ...+..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF-----QTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCEEEEEE
Confidence 47999999999999998899999999986432 222344555554 57888999999999885 4566899999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|..++. ....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 76 e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 142 (321)
T cd05603 76 DYVNGGELFFHLQ----------RERCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGL 142 (321)
T ss_pred cCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCC
Confidence 9999999998873 2346788889999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
++...... .......||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 198 (321)
T cd05603 143 CKEGVEPE--ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (321)
T ss_pred CccCCCCC--CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCC
Confidence 87532211 122334689999999999998999999999999999999999999965
No 230
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.9e-34 Score=301.22 Aligned_cols=258 Identities=19% Similarity=0.242 Sum_probs=201.9
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|++.+.||.|+||.||++.+..++..||+|++.... ....+.+..|++++++++|+||+++++++.. ..+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 4788899999999999999998899999999986432 2334578899999999999999999997642 3355689
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCC--CCCeeeccCCCCCeeeCCCCCeEE
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGC--KPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~--s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
++|||+++++|.+++... ......+++..++.++.||+.||.|||..+ +.+|+|+||+|+||+++.++.+||
T Consensus 78 ~~~e~~~~~~L~~~l~~~------~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl 151 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKC------KKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKL 151 (265)
T ss_pred EEehhccCCCHHHHHHHH------hhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEE
Confidence 999999999999998531 123456899999999999999999999443 678999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||++......... .....++..|+|||++.+..++.++||||||+++|+|++|+.||...... .+...
T Consensus 152 ~d~g~~~~~~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~------ 221 (265)
T cd08217 152 GDFGLAKILGHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL--QLASK------ 221 (265)
T ss_pred ecccccccccCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH--HHHHH------
Confidence 999999876543221 22345889999999999988999999999999999999999998753211 11110
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
+..... +... ......+.+++.+||+.+|++||++.+|++.
T Consensus 222 ------~~~~~~---------------~~~~------~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 222 ------IKEGKF---------------RRIP------YRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ------HhcCCC---------------CCCc------cccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000000 0000 0112357899999999999999999999763
No 231
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=4e-34 Score=305.98 Aligned_cols=255 Identities=21% Similarity=0.348 Sum_probs=194.7
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---c-------chhHHHHHHHHHHhhhhccceeeeeeeeccc
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---D-------ASKSFTVECEVMRNIIHRKIIKVVTACSRVD 230 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~-------~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~ 230 (873)
+|...+.||+|+||.||+|....+++.||+|.++.... . ..+.+..|+.++++++|+||+++++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~---- 77 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFE---- 77 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEe----
Confidence 46778999999999999999888899999998753211 1 124578899999999999999999986
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND 310 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~ 310 (873)
...+..++||||+++++|.+++.. ...+++..+..++.||+.||.||| +.+++||||+|+||+++.
T Consensus 78 -~~~~~~~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~ 143 (272)
T cd06629 78 -TTEEYLSIFLEYVPGGSIGSCLRT----------YGRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDA 143 (272)
T ss_pred -ccCCceEEEEecCCCCcHHHHHhh----------ccCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcC
Confidence 345678999999999999999843 256888899999999999999999 899999999999999999
Q ss_pred CCCeEEeccccccccccccccccccccccccccCCCcccCCCC--CCcchhhHhHHHHHHHHHhCCCCCCcccccchhhH
Q 002857 311 EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHE--TSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 311 ~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~--~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~ 388 (873)
++.++|+|||+++...............++..|+|||.+.... ++.++||||||+++|||++|..||...... .
T Consensus 144 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~ 219 (272)
T cd06629 144 DGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI----A 219 (272)
T ss_pred CCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH----H
Confidence 9999999999997654322222223345889999999987654 789999999999999999999998542110 0
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
. ..++........ .+.. ...+....+.+++.+||+.+|++|||+.+|++
T Consensus 220 ~---------~~~~~~~~~~~~------------~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 220 A---------MFKLGNKRSAPP------------IPPD-----VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred H---------HHHhhccccCCc------------CCcc-----ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 0 000000000000 0000 00112345788999999999999999999875
No 232
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=8.6e-35 Score=309.70 Aligned_cols=241 Identities=23% Similarity=0.339 Sum_probs=185.2
Q ss_pred eeecccCceEEEEEEEcCCCc-------EEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 166 NLIGAGNFASVYKGILFEGAP-------AVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~-------~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+.||+|+||.||+|.....+. .||+|.+........+.+.+|+.+++.++|+||+++++++. .+...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-----~~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCV-----CGDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEE-----eCCCcE
Confidence 369999999999998755433 48889886555455578899999999999999999999963 345689
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC-----
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT----- 313 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~----- 313 (873)
+||||+++|+|.++++. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.
T Consensus 76 lv~e~~~~g~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~ 143 (258)
T cd05078 76 MVQEYVKFGSLDTYLKK---------NKNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGN 143 (258)
T ss_pred EEEecCCCCcHHHHHhc---------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCC
Confidence 99999999999999953 2336889999999999999999999 899999999999999987765
Q ss_pred ---eEEeccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCC-CCCCcccccchhhH
Q 002857 314 ---ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGL-RPSDDMFKDNLNLQ 388 (873)
Q Consensus 314 ---vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk-~Pf~~~~~~~~~l~ 388 (873)
++++|||++...... ....++..|+|||++.+. .++.++||||||+++|||++|. .||.......
T Consensus 144 ~~~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~---- 213 (258)
T cd05078 144 PPFIKLSDPGISITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK---- 213 (258)
T ss_pred CceEEecccccccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH----
Confidence 589999988654321 123578899999998874 5789999999999999999985 5543311100
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
...+.... ...|.. ...++.+++.+||+.+|++|||+.+|++.|+
T Consensus 214 ----------~~~~~~~~--------------~~~~~~---------~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 214 ----------KLQFYEDR--------------HQLPAP---------KWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ----------HHHHHHcc--------------ccCCCC---------CcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00000000 000110 0124788999999999999999999998873
No 233
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=5.1e-34 Score=301.01 Aligned_cols=247 Identities=26% Similarity=0.415 Sum_probs=191.3
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeec
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFM 244 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~ 244 (873)
++||+|+||.||+|.. .++..||+|+++..... ....+.+|++++++++|+||+++++++. .....++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT-----QRQPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe-----cCCccEEEEECC
Confidence 3699999999999986 46789999998754322 2346889999999999999999999863 445689999999
Q ss_pred CCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 245 PNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 245 ~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
++++|.+++.. ....+++..++.++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++..
T Consensus 75 ~~~~L~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 142 (250)
T cd05085 75 PGGDFLSFLRK---------KKDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQ 142 (250)
T ss_pred CCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCcccee
Confidence 99999998842 2345789999999999999999999 89999999999999999999999999999975
Q ss_pred cccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhHHHHh
Q 002857 325 LEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERVEEIV 403 (873)
Q Consensus 325 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l~eli 403 (873)
...... .......++..|+|||++.+..++.++||||||+++|||++ |..||....... ... .+
T Consensus 143 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~--~~~------------~~ 207 (250)
T cd05085 143 EDDGIY-SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ--ARE------------QV 207 (250)
T ss_pred cccccc-ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH--HHH------------HH
Confidence 432211 11111234678999999998899999999999999999999 999986531111 000 00
Q ss_pred hhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 404 DTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 404 d~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
...... ..+. .+...+.+++.+||+.+|++||++.||++.|.
T Consensus 208 ~~~~~~------------~~~~---------~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 208 EKGYRM------------SCPQ---------KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HcCCCC------------CCCC---------CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 000000 0000 11235788999999999999999999998874
No 234
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=6.6e-34 Score=303.46 Aligned_cols=204 Identities=24% Similarity=0.379 Sum_probs=170.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-----CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-----HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-----~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
++|++.+.||+|+||.||+|.+..+++.||||.+.... ....+.+.+|+.++++++|+||+++++++.. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRD---PME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEecc---CCC
Confidence 57899999999999999999998889999999886321 1223578889999999999999999997532 223
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++++|.+++.. ...+++...+.++.|++.||+||| +.+|+|+||||+||+++.++.+
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~ 145 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKS----------YGALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNV 145 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCE
Confidence 467899999999999999842 234788889999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccc-cccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 315 CVADFGIARFLEATNE-QTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 315 KLsDFGla~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|+|||+++....... ........++..|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 146 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 211 (265)
T cd06652 146 KLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAE 211 (265)
T ss_pred EECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCc
Confidence 9999999986532211 1112234588999999999888899999999999999999999999864
No 235
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.1e-34 Score=318.30 Aligned_cols=201 Identities=20% Similarity=0.228 Sum_probs=165.2
Q ss_pred cceeeccc--CceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 164 SENLIGAG--NFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 164 ~~~~LG~G--~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
+.++||+| +|++||++....+++.||||+++.... ...+.+.+|+++++.++||||+++++++ ..++..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~-----~~~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATF-----IADNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----EECCEEEE
Confidence 45789999 789999999999999999999875432 2335678899999999999999999996 34567899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++|+|.+++.. .....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.++++||
T Consensus 77 v~e~~~~~~l~~~~~~--------~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~ 145 (327)
T cd08227 77 VTSFMAYGSAKDLICT--------HFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGL 145 (327)
T ss_pred EEeccCCCcHHHHHHh--------hccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEccc
Confidence 9999999999999843 12345889999999999999999999 899999999999999999999999999
Q ss_pred cccccccccccc-----ccccccccccccCCCcccCC--CCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 320 GIARFLEATNEQ-----TSSIGVKGTTGYIAPEYGMG--HETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 320 Gla~~~~~~~~~-----~~~~~~~Gt~~Y~APE~l~~--~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
+........... .......++..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 146 RSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred chhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 875433211110 01112346778999999876 46899999999999999999999999763
No 236
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=5.5e-34 Score=302.62 Aligned_cols=259 Identities=25% Similarity=0.313 Sum_probs=201.3
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
++|++.+.||.|+||.||+|....++..+|+|++.... ....+.+.+|+++++.++|+||+++++.+ ......+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSF-----VVGDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEE-----eeCCEEE
Confidence 47899999999999999999988889999999986433 23457899999999999999999999985 4466789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++... .....+++.....++.|++.||+||| +.+|+||||+|+||++++++.++|+|
T Consensus 76 iv~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~d 145 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSS-------YPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIAD 145 (267)
T ss_pred EEEeccCCCcHHHHHHHh-------cccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcc
Confidence 999999999999998530 11246889999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccc--cccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 319 FGIARFLEATNEQT--SSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 319 FGla~~~~~~~~~~--~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
||++..+....... ......++..|+|||++... .++.++||||||+++|||++|+.||....... .+.......
T Consensus 146 f~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~- 223 (267)
T cd06610 146 FGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQND- 223 (267)
T ss_pred cchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcCC-
Confidence 99998665433221 22334588999999998877 78999999999999999999999996532111 011110000
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
...+.. . .........+.+++.+||+.||++||++.+|++
T Consensus 224 --------~~~~~~----------------~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 224 --------PPSLET----------------G----ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred --------CCCcCC----------------c----cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000 0 000112335788999999999999999999875
No 237
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.1e-35 Score=296.57 Aligned_cols=250 Identities=22% Similarity=0.317 Sum_probs=205.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|++.+.||+|.||.||.|+.+.++-.||+|++-+. ..+...++.+|++|-+.|+||||+++++++ .+..
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f-----hd~~ 95 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF-----HDSK 95 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe-----eccc
Confidence 35789999999999999999999999999999998532 233457899999999999999999999995 5667
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..||++||..+|+|...|.. .....+++.....++.|+|.||.|+| .++||||||||+|+|++.++..|
T Consensus 96 riyLilEya~~gel~k~L~~--------~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lk 164 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQE--------GRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELK 164 (281)
T ss_pred eeEEEEEecCCchHHHHHHh--------cccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCee
Confidence 89999999999999999954 45667889999999999999999999 99999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||-+..-+.. .-....||+.|.+||...+...+...|+|++|++.||++.|.+||+....+. .+
T Consensus 165 iAdfGwsV~~p~~----kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e-tY-------- 231 (281)
T KOG0580|consen 165 IADFGWSVHAPSN----KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE-TY-------- 231 (281)
T ss_pred ccCCCceeecCCC----CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH-HH--------
Confidence 9999998754321 2223579999999999999999999999999999999999999998643111 11
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
..+....+. .| ........+++..|+..+|.+|.+..||+..
T Consensus 232 ----krI~k~~~~--------------~p---------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 232 ----KRIRKVDLK--------------FP---------STISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred ----HHHHHcccc--------------CC---------cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 111110000 00 0012246789999999999999999998764
No 238
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.5e-34 Score=307.07 Aligned_cols=261 Identities=25% Similarity=0.267 Sum_probs=200.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
++|...+.||.|++|.||++.+..+++.+|+|++..... .....+.+|++++++++|+||+++++++.. ......+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLD---ESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEc---cCCCeEE
Confidence 468889999999999999999988899999999874433 344678999999999999999999998743 2345689
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++... ......+++..+..|+.||+.||+||| ..+++|+||+|+||+++.++.++|+|
T Consensus 78 lv~e~~~~~~L~~~l~~~------~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d 148 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKV------KKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCD 148 (287)
T ss_pred EEEEecCCCCHHHHHHHH------HhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEee
Confidence 999999999999987431 123456888899999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCccccc---chhhHHHHhhcC
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKD---NLNLQNWVQSAL 395 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~---~~~l~~~~~~~~ 395 (873)
||++........ ....++..|+|||.+.+..++.++||||||+++|||++|+.||...... ...+..++....
T Consensus 149 fg~~~~~~~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (287)
T cd06621 149 FGVSGELVNSLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP 224 (287)
T ss_pred cccccccccccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC
Confidence 999875432211 1234788999999999889999999999999999999999999753211 011111110000
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
. ..+... +. ... .....+.+++.+||+.+|++|||+.||++
T Consensus 225 ~--------~~~~~~-------------~~--~~~----~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 225 N--------PELKDE-------------PG--NGI----KWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred c--------hhhccC-------------CC--CCC----chHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0 000000 00 000 01235789999999999999999999876
No 239
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4.8e-34 Score=305.18 Aligned_cols=265 Identities=25% Similarity=0.409 Sum_probs=198.1
Q ss_pred CCcceeecccCceEEEEEEEcC---CCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeeccccc-CCc
Q 002857 162 FSSENLIGAGNFASVYKGILFE---GAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQ-GND 235 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~---~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~-~~~ 235 (873)
|.+.+.||+|+||.||+|.+.. ++..||||++.... ....+.+.+|++++++++||||+++++++...... ...
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 5677899999999999998753 46789999986432 23346788999999999999999999986432111 112
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++++||+.+|+|.+++.... .......+++...+.++.||+.||+||| +.+|+||||||+||+++.++.+|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~k 153 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSR----IGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVC 153 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhc----ccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEE
Confidence 3578999999999998874211 1122345788899999999999999999 88999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+++...............++..|++||.+....++.++||||||+++|||++ |+.||..... ..+..++..
T Consensus 154 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~- 230 (273)
T cd05074 154 VADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLIK- 230 (273)
T ss_pred ECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHHc-
Confidence 999999986543322222222345678999999988889999999999999999999 8888864211 111111100
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
. . .....+ .....+.+++.+||+.+|++||++.||++.|+.+
T Consensus 231 ----------~----~--------~~~~~~----------~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 ----------G----N--------RLKQPP----------DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred ----------C----C--------cCCCCC----------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 0 000000 0123588999999999999999999999999875
No 240
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.7e-34 Score=319.71 Aligned_cols=194 Identities=25% Similarity=0.314 Sum_probs=167.0
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.||+|+||.||+|....+++.||+|+++... ....+.+..|+.++.++ +|+||+++++++ ......++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF-----QTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE-----EeCCEEEEEE
Confidence 47999999999999999999999999997432 22345688899999888 699999999985 4566799999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|.+++. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 76 e~~~~~~L~~~~~----------~~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~ 142 (327)
T cd05617 76 EYVNGGDLMFHMQ----------RQRKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGM 142 (327)
T ss_pred eCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEecccc
Confidence 9999999998884 2346899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
++...... .......||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~ 198 (327)
T cd05617 143 CKEGLGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 198 (327)
T ss_pred ceeccCCC--CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence 87532211 122235689999999999999999999999999999999999999964
No 241
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=313.99 Aligned_cols=271 Identities=25% Similarity=0.407 Sum_probs=200.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh--hhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI--IHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L--~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++..+.+.||+|.||.||+|.| .|+.||||+|.. .+.+.+.+|.+|++.+ +|+||+.+++.-... ...-.+
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~-~gs~TQ 283 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKD-NGSWTQ 283 (513)
T ss_pred hheeEEEEEecCccccceeeccc--cCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccC-CCceEE
Confidence 35667789999999999999999 567899999973 3346788899998864 999999999873211 122347
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCC-----CCCeeeccCCCCCeeeCCC
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGC-----KPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~-----s~gIvHrDLKpsNILLd~~ 311 (873)
++||++|.+.|||.|||. ...++....++++..+|.||+|||.+. ++.|.|||||+.|||+..+
T Consensus 284 LwLvTdYHe~GSL~DyL~-----------r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn 352 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLN-----------RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 352 (513)
T ss_pred EEEeeecccCCcHHHHHh-----------hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccC
Confidence 899999999999999994 356888999999999999999999753 7889999999999999999
Q ss_pred CCeEEecccccccccccccc--ccccccccccccCCCcccCCC------CCCcchhhHhHHHHHHHHHhC----------
Q 002857 312 MTACVADFGIARFLEATNEQ--TSSIGVKGTTGYIAPEYGMGH------ETSSYGDVYSFGILLLEMFTG---------- 373 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~~------~~s~ksDVwSfGvvL~ELlTG---------- 373 (873)
+.+.|+|+|+|......... ......+||.+|||||++... .....+||||||.|+||++-.
T Consensus 353 ~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey 432 (513)
T KOG2052|consen 353 GTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEY 432 (513)
T ss_pred CcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhh
Confidence 99999999999866554221 222335699999999997653 123458999999999999753
Q ss_pred CCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcC
Q 002857 374 LRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPG 453 (873)
Q Consensus 374 k~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~ 453 (873)
+.||.+....+. .+.++.+-.-... ..|..+. +....+++..+.+++..||..||.
T Consensus 433 ~~Pyyd~Vp~DP------------s~eeMrkVVCv~~-----------~RP~ipn-rW~s~~~l~~m~klMkeCW~~Np~ 488 (513)
T KOG2052|consen 433 QLPYYDVVPSDP------------SFEEMRKVVCVQK-----------LRPNIPN-RWKSDPALRVMAKLMKECWYANPA 488 (513)
T ss_pred cCCcccCCCCCC------------CHHHHhcceeecc-----------cCCCCCc-ccccCHHHHHHHHHHHHhhcCCch
Confidence 344444222221 2222222111111 0111111 111234577899999999999999
Q ss_pred CCCCHHHHHHHHHHHHH
Q 002857 454 ERMKINDVELGLRLIKK 470 (873)
Q Consensus 454 eRPTm~EVl~~Le~i~~ 470 (873)
-|-|+--|-+.|.++.+
T Consensus 489 aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 489 ARLTALRIKKTLAKLSN 505 (513)
T ss_pred hhhHHHHHHHHHHHHhc
Confidence 99999988888887643
No 242
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.3e-34 Score=305.95 Aligned_cols=254 Identities=24% Similarity=0.323 Sum_probs=199.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
++|+..+.||+|+||.||++.+..+++.||+|++..... ...+.+.+|++++++++|+||+++++.+ ......+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAF-----YNNGDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheee-----ecCCEEE
Confidence 367788999999999999999988899999999875432 3446789999999999999999999986 3457899
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCCeeeCCCCCeEEe
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCK-PPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s-~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
+|+||+++++|.+++.. ....+++..+..++.|++.||+||| + .+++|+||||+||++++++.++|+
T Consensus 76 lv~e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~ 143 (265)
T cd06605 76 ICMEYMDGGSLDKILKE---------VQGRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLC 143 (265)
T ss_pred EEEEecCCCcHHHHHHH---------ccCCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEe
Confidence 99999999999999853 1256888899999999999999999 7 899999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
|||.+......... ...++..|+|||++.+..++.++||||||+++|+|++|+.||.........
T Consensus 144 d~g~~~~~~~~~~~----~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~----------- 208 (265)
T cd06605 144 DFGVSGQLVNSLAK----TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG----------- 208 (265)
T ss_pred ecccchhhHHHHhh----cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc-----------
Confidence 99998765332211 155888999999999999999999999999999999999998653211111
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+.+...+... .+... .. .....+.+++.+||..+|++|||+.+++.
T Consensus 209 -~~~~~~~~~~~~------------~~~~~--~~---~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 209 -IFELLQYIVNEP------------PPRLP--SG---KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred -HHHHHHHHhcCC------------CCCCC--hh---hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 111111111110 00000 00 02335788999999999999999999864
No 243
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.6e-34 Score=309.07 Aligned_cols=254 Identities=22% Similarity=0.294 Sum_probs=199.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.+.||.|+||.||+|.+..++..||+|+++.......+.+..|++++++++|+||+++++++ ..+...+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAY-----FYENKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEE-----ecCCeEE
Confidence 45788999999999999999999888999999999765555567899999999999999999999985 4466789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. ....+++..++.++.|++.||.||| +.+|+|+||||+||+++.++.++|+|
T Consensus 79 lv~e~~~~~~L~~~~~~---------~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d 146 (280)
T cd06611 79 ILIEFCDGGALDSIMLE---------LERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLAD 146 (280)
T ss_pred EEeeccCCCcHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEcc
Confidence 99999999999999842 2346899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccC-----CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGM-----GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||++........ ......++..|+|||++. +..++.++||||||+++|||++|+.||....... .+
T Consensus 147 ~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~-~~------ 217 (280)
T cd06611 147 FGVSAKNKSTLQ--KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR-VL------ 217 (280)
T ss_pred Cccchhhccccc--ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-HH------
Confidence 999875433221 122345889999999875 3457789999999999999999999986531110 00
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
..+.. .. .+.... .......+.+++..||+.+|.+||++.+|++.
T Consensus 218 ------~~~~~----~~------------~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 218 ------LKILK----SE------------PPTLDQ----PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ------HHHhc----CC------------CCCcCC----cccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 00000 00 000000 00012247789999999999999999998653
No 244
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=5.4e-34 Score=301.12 Aligned_cols=248 Identities=24% Similarity=0.349 Sum_probs=195.7
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-----CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-----HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-----~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
+|+..+.||+|+||.||+|....++..||+|.+.... ....+.+.+|++++++++|+||+++++++ ..+.
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTE-----REED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeE-----ecCC
Confidence 4677899999999999999998789999999986433 22346789999999999999999999985 4456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++++|.+++.. ...+++..+..++.||+.||+||| +.+|+|+||+|+||+++.++.+|
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~k 142 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKK----------YGSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVK 142 (258)
T ss_pred eEEEEEEecCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEE
Confidence 78999999999999999842 345889999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCC-CCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHE-TSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||++....... ......++..|+|||.+.... ++.++||||||+++|+|++|+.||....... ..
T Consensus 143 l~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~-~~------- 211 (258)
T cd06632 143 LADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA-AV------- 211 (258)
T ss_pred EccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH-HH-------
Confidence 99999988654322 122345888999999987766 8999999999999999999999986532100 00
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+... . ..+... ......+.+++.+||+.+|++||++.+++.
T Consensus 212 -----~~~~~~---~------------~~~~~~------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 212 -----FKIGRS---K------------ELPPIP------DHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -----HHHHhc---c------------cCCCcC------CCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 000000 0 000000 001234778999999999999999999874
No 245
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=4.4e-34 Score=346.39 Aligned_cols=270 Identities=23% Similarity=0.321 Sum_probs=203.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.++||+|+||.||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++ ..++.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~-----~d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSIC-----SDGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEE-----eeCCE
Confidence 578999999999999999999988899999999874322 2245789999999999999999999986 34567
Q ss_pred EEEEEeecCCCChhhhcccccccc-cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEED-KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~-~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
.++||||+++|+|.+++....... ........+++..++.|+.||++||+||| +.+|+||||||+|||++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEE
Confidence 899999999999999985321110 00112345677888999999999999999 89999999999999999999999
Q ss_pred Eeccccccccccccc----------------cccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 316 VADFGIARFLEATNE----------------QTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 316 LsDFGla~~~~~~~~----------------~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 999999986521110 0011124589999999999999999999999999999999999999965
Q ss_pred ccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-CH
Q 002857 380 MFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-KI 458 (873)
Q Consensus 380 ~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-Tm 458 (873)
......... . .+ ..+.. ..+. .+.+..+.+++.+|++.||++|| ++
T Consensus 234 ~~~~ki~~~------------~----~i-~~P~~--------~~p~--------~~iP~~L~~LI~rcL~~DP~kR~ss~ 280 (932)
T PRK13184 234 KKGRKISYR------------D----VI-LSPIE--------VAPY--------REIPPFLSQIAMKALAVDPAERYSSV 280 (932)
T ss_pred cchhhhhhh------------h----hc-cChhh--------cccc--------ccCCHHHHHHHHHHccCChhhCcCHH
Confidence 211110000 0 00 00000 0000 01233577899999999999996 56
Q ss_pred HHHHHHHHHHHH
Q 002857 459 NDVELGLRLIKK 470 (873)
Q Consensus 459 ~EVl~~Le~i~~ 470 (873)
.++++.|+....
T Consensus 281 eeLl~~Le~~lq 292 (932)
T PRK13184 281 QELKQDLEPHLQ 292 (932)
T ss_pred HHHHHHHHHHHh
Confidence 777777776543
No 246
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=6.5e-34 Score=315.61 Aligned_cols=283 Identities=20% Similarity=0.245 Sum_probs=203.9
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.+++|++.++||+|+||.||+|++..+++.||||+++... ......+.+|+.++++++|+||+++++++....+.....
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 3578999999999999999999998899999999986432 233456888999999999999999999876544445567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++|+||+.+ +|.+++. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 83 ~~lv~e~~~~-~l~~~~~-----------~~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl 147 (336)
T cd07849 83 VYIVQELMET-DLYKLIK-----------TQHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKI 147 (336)
T ss_pred EEEEehhccc-CHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEE
Confidence 8999999964 8887763 245889999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccc-cccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 317 ADFGIARFLEATNEQT-SSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 317 sDFGla~~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
+|||+++......... ......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||..... ......+...
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~--~~~~~~~~~~ 225 (336)
T cd07849 148 CDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY--LHQLNLILGV 225 (336)
T ss_pred CcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHH
Confidence 9999998654322111 1123458899999998655 4689999999999999999999999965221 1111111111
Q ss_pred Cc----hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 395 LP----ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 395 ~~----~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
+. +.+..+.+...... .......+.. ............+.+++.+||+.+|++|||+.|+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 226 LGTPSQEDLNCIISLRARNY------IKSLPFKPKV-PWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred cCCCCHHHHHHhhchhhhhH------HhhcCcCCcc-cHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11 12222221111000 0000000000 0000111123458899999999999999999998775
No 247
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4.6e-34 Score=304.15 Aligned_cols=262 Identities=24% Similarity=0.299 Sum_probs=201.6
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecccc-cCC
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDY-QGN 234 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~-~~~ 234 (873)
.++++|++.+.||+|++|.||+|.+..+++.+++|++..... ..+.+.+|+.+++++ +|+||+++++++..... ...
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 357899999999999999999999988889999999875433 346799999999999 79999999999754332 235
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++++|.+++... ......+++..+..++.|++.||.||| +.+++|+||+|+||++++++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~ 152 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGL------RKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEV 152 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHH------hhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeE
Confidence 5689999999999999998531 112456889999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCC-----CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHH
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-----HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQN 389 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~ 389 (873)
||+|||++........ ......++..|+|||++.. ..++.++||||||+++|+|++|+.||....... .+
T Consensus 153 ~l~d~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~-- 227 (275)
T cd06608 153 KLVDFGVSAQLDSTLG--RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-AL-- 227 (275)
T ss_pred EECCCccceecccchh--hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-HH--
Confidence 9999999876533221 1223458899999998754 346788999999999999999999996421110 00
Q ss_pred HHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 390 WVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 390 ~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+..... +.... .......+.+++.+||..||++|||+.||++
T Consensus 228 ----------~~~~~~~~----------------~~~~~----~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 228 ----------FKIPRNPP----------------PTLKS----PENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ----------HHhhccCC----------------CCCCc----hhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 01100000 00000 0111335778999999999999999999875
No 248
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=7.8e-34 Score=300.67 Aligned_cols=251 Identities=27% Similarity=0.440 Sum_probs=195.6
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
.+|++.+.||+|+||.||+|.+. .+..+|+|++..... ....+.+|++++++++|+||+++++++ ......++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~ 76 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVC-----TERSPICL 76 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEE-----ccCCceEE
Confidence 46788899999999999999875 467899998864332 346789999999999999999999985 44567899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++++|.+++.. ....+++..++.++.+++.||+||| +.+++|+||||+||+++.++.+||+||
T Consensus 77 v~e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~ 144 (256)
T cd05112 77 VFEFMEHGCLSDYLRA---------QRGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDF 144 (256)
T ss_pred EEEcCCCCcHHHHHHh---------CccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCC
Confidence 9999999999999842 2345788999999999999999999 889999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
|+++....... .......++.+|+|||++.+..++.++||||||+++|||++ |+.||....... +..
T Consensus 145 g~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~--------- 212 (256)
T cd05112 145 GMTRFVLDDQY-TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE--VVE--------- 212 (256)
T ss_pred cceeecccCcc-cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH--HHH---------
Confidence 99875533211 11122235678999999998899999999999999999998 999986522110 000
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
.+ ...... ..+.. ....+.+|+.+||+.+|++|||+.||+++|
T Consensus 213 --~~-~~~~~~------------~~~~~---------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 213 --TI-NAGFRL------------YKPRL---------ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred --HH-hCCCCC------------CCCCC---------CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 00 000000 00000 023478899999999999999999999887
No 249
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.2e-34 Score=308.16 Aligned_cols=248 Identities=25% Similarity=0.318 Sum_probs=196.9
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
.|+..+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++|+||+++++++ ..+...++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY-----LKGTKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccc-----ccCCceEE
Confidence 3566788999999999999998889999999987433 33446789999999999999999999985 45667899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++++|.+++. ...+++..+..++.||+.||.||| ..+++|+||+|+||++++++.++|+||
T Consensus 80 v~e~~~~~~L~~~~~-----------~~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~df 145 (277)
T cd06642 80 IMEYLGGGSALDLLK-----------PGPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADF 145 (277)
T ss_pred EEEccCCCcHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccc
Confidence 999999999999883 235788999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
|++..+..... ......++..|+|||++.+..++.++||||||+++|||+||+.||....... ...
T Consensus 146 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~---------- 211 (277)
T cd06642 146 GVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLF---------- 211 (277)
T ss_pred cccccccCcch--hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHh----------
Confidence 99976543221 1122357889999999999889999999999999999999999986422111 000
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
.+..... +.. .......+.+++.+||+.+|++||+|.+|+..
T Consensus 212 --~~~~~~~---------------~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 212 --LIPKNSP---------------PTL------EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred --hhhcCCC---------------CCC------CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0000000 000 00112347789999999999999999999974
No 250
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-35 Score=327.52 Aligned_cols=246 Identities=25% Similarity=0.345 Sum_probs=201.8
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeecC
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFMP 245 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~ 245 (873)
-+||+|.||+||.|++..+...+|||-+........+-+..||.+-++|+|.|||+++|.| ..+++.-|.||.++
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~-----senGf~kIFMEqVP 655 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSV-----SENGFFKIFMEQVP 655 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhcc-----CCCCeEEEEeecCC
Confidence 4799999999999999999999999999877666777899999999999999999999996 45668899999999
Q ss_pred CCChhhhcccccccccccCCCCCC--chhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC-CCCCeEEeccccc
Q 002857 246 NGSLEEWIHPITEEDKRHKAPGNL--NSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN-DEMTACVADFGIA 322 (873)
Q Consensus 246 ~GSL~~~L~~~~~~~~~~~~~~~L--s~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd-~~~~vKLsDFGla 322 (873)
||||.++|+. .-+++ ++.++-.+.+||++||.||| .+.|||||||-+|||++ -.|.+||+|||.+
T Consensus 656 GGSLSsLLrs---------kWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTs 723 (1226)
T KOG4279|consen 656 GGSLSSLLRS---------KWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTS 723 (1226)
T ss_pred CCcHHHHHHh---------ccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccc
Confidence 9999999964 23344 67788889999999999999 89999999999999996 6899999999999
Q ss_pred cccccccccccccccccccccCCCcccCCC--CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHH
Q 002857 323 RFLEATNEQTSSIGVKGTTGYIAPEYGMGH--ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVE 400 (873)
Q Consensus 323 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~ 400 (873)
+.+..-+.- +....||+.|||||++..+ .|..++|||||||++.||.||++||-...... .
T Consensus 724 KRLAginP~--TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq---------------A 786 (1226)
T KOG4279|consen 724 KRLAGINPC--TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ---------------A 786 (1226)
T ss_pred hhhccCCcc--ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh---------------H
Confidence 987654432 3345699999999999876 58999999999999999999999996532111 0
Q ss_pred HHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 401 EIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 401 elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.++. ..-++.||..+. +...+...++++|+.++|.+||+++++++
T Consensus 787 AMFk------------VGmyKvHP~iPe------elsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 787 AMFK------------VGMYKVHPPIPE------ELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred hhhh------------hcceecCCCCcH------HHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 1111 111345555433 23445778999999999999999998864
No 251
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=8.9e-34 Score=301.95 Aligned_cols=254 Identities=24% Similarity=0.389 Sum_probs=197.7
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.+.||+|+||.||+|.+. ++..+|+|.+.... ...+.+.+|++++++++|+||+++++++. . ...+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~-~~~~ 76 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-----K-EPIY 76 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEc-----C-CCeE
Confidence 357889999999999999999864 55679999886432 23467899999999999999999999853 2 5679
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. .....+++.+++.++.|++.||.||| +.+++|+||||+||+++.++.+||+|
T Consensus 77 ~v~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d 145 (260)
T cd05073 77 IITEFMAKGSLLDFLKS--------DEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIAD 145 (260)
T ss_pred EEEEeCCCCcHHHHHHh--------CCccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECC
Confidence 99999999999999853 23446788899999999999999999 88999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||.+........ .......++..|+|||++....++.++||||||+++|+|+| |+.||...... .....+
T Consensus 146 ~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~------ 216 (260)
T cd05073 146 FGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRAL------ 216 (260)
T ss_pred CcceeeccCCCc-ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHHHH------
Confidence 999976543221 11222345678999999998889999999999999999999 99998652111 011110
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
..... .+.. ......+.+++.+||+.+|++||++.+|.+.|+.
T Consensus 217 ------~~~~~--------------~~~~-------~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 217 ------ERGYR--------------MPRP-------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ------hCCCC--------------CCCc-------ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 00000 0000 0112357889999999999999999999999974
No 252
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=8.7e-34 Score=299.16 Aligned_cols=252 Identities=27% Similarity=0.452 Sum_probs=197.0
Q ss_pred CCcceeecccCceEEEEEEEcCCC----cEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 162 FSSENLIGAGNFASVYKGILFEGA----PAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g----~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
|++.+.||.|+||.||++++...+ ..||+|+++..... ..+.+..|+.++..++|+||+++++++ ...+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVC-----TEEEP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEE-----cCCCe
Confidence 456789999999999999997655 88999999755433 557899999999999999999999986 34467
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++++|.+++.. .....+++.+++.++.|++.||+||| +.+++|+||||+||++++++.++|
T Consensus 76 ~~~i~e~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l 144 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRK--------NRPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKI 144 (258)
T ss_pred eEEEEeccCCCCHHHHHHh--------hhhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEE
Confidence 8999999999999999853 11222899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||+++........... ...++..|+|||.+.+..++.++||||||++++||++ |..||...... .+...
T Consensus 145 ~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~--~~~~~----- 216 (258)
T smart00219 145 SDFGLSRDLYDDDYYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE--EVLEY----- 216 (258)
T ss_pred cccCCceecccccccccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH-----
Confidence 999999866543221111 2236789999999988889999999999999999998 78887642111 01110
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
+..... +... ......+.+++.+||+.+|++|||+.|+++.|
T Consensus 217 ------~~~~~~----------------~~~~------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 217 ------LKKGYR----------------LPKP------ENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ------HhcCCC----------------CCCC------CcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 000000 0000 00233578899999999999999999998764
No 253
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.2e-34 Score=324.98 Aligned_cols=208 Identities=24% Similarity=0.300 Sum_probs=176.2
Q ss_pred HHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeec
Q 002857 152 YEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSR 228 (873)
Q Consensus 152 ~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~ 228 (873)
+.++....++|++.+.||+|+||.||++.+..+++.||+|++... .......+.+|+.+++.++||||+++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-- 112 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-- 112 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE--
Confidence 445556678999999999999999999999999999999998632 222335678899999999999999999985
Q ss_pred ccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 229 VDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 229 ~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
..+...++||||+++|+|.+++.. ..+++..+..++.||+.||+||| +.+|+||||||+|||+
T Consensus 113 ---~~~~~~~lv~Ey~~gg~L~~~~~~-----------~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll 175 (371)
T cd05622 113 ---QDDRYLYMVMEYMPGGDLVNLMSN-----------YDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLL 175 (371)
T ss_pred ---EcCCEEEEEEcCCCCCcHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEE
Confidence 456789999999999999999842 24778888999999999999999 8999999999999999
Q ss_pred CCCCCeEEeccccccccccccccccccccccccccCCCcccCCC----CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 309 NDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH----ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 309 d~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~----~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+.++.+||+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 176 ~~~~~ikL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 176 DKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred CCCCCEEEEeCCceeEcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 9999999999999986543221 112235699999999998754 378999999999999999999999975
No 254
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=9.4e-34 Score=301.97 Aligned_cols=251 Identities=21% Similarity=0.305 Sum_probs=193.8
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC------cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH------DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~------~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
+|...+.||+|+||.||+|.. .+++.+|||.++.... .....+.+|++++++++|+||+++++++ ...
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTC-----LDD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEe-----ecC
Confidence 477889999999999999976 5678999998864321 1235688899999999999999999996 345
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++++|.+++.. ...+++..+..++.|++.||+||| +.+|+|+||+|+||++++++.+
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~ 141 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNR----------FGPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGII 141 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeE
Confidence 689999999999999999842 245788899999999999999999 8899999999999999999999
Q ss_pred EEeccccccccccccc----cccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHH
Q 002857 315 CVADFGIARFLEATNE----QTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 315 KLsDFGla~~~~~~~~----~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~ 390 (873)
+|+|||++........ ........++..|+|||++.+..++.++||||||+++|||++|+.||........ .
T Consensus 142 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-~--- 217 (265)
T cd06631 142 KLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA-M--- 217 (265)
T ss_pred EeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH-H---
Confidence 9999999986532111 1112234588999999999988899999999999999999999999965211100 0
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+.... . ..+... ......+.+++.+||+.+|++||++.||+.
T Consensus 218 ---------~~~~~~~--~------------~~~~~~------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 218 ---------FYIGAHR--G------------LMPRLP------DSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ---------HHhhhcc--C------------CCCCCC------CCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000000 0 000000 001234788999999999999999998864
No 255
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=4.9e-34 Score=302.58 Aligned_cols=247 Identities=26% Similarity=0.424 Sum_probs=194.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
++|++.+.||+|+||.||++.. .++.||+|+++... ....+.+|+.++++++|+||+++++++. .+..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~------~~~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVIL------HNGLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEc------CCCcEE
Confidence 4578899999999999999965 67789999986432 3467899999999999999999999863 233689
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++++|.+++.. .....+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+||
T Consensus 76 v~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Df 144 (254)
T cd05083 76 VMELMSKGNLVNFLRT--------RGRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDF 144 (254)
T ss_pred EEECCCCCCHHHHHHh--------cCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCC
Confidence 9999999999999853 22345788999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
|+++...... .....+..|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 145 g~~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-------------- 205 (254)
T cd05083 145 GLARVGSMGV-----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE-------------- 205 (254)
T ss_pred ccceeccccC-----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH--------------
Confidence 9987543211 11234578999999988899999999999999999998 999986532110
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
..+.+...... .+. ......+.+++.+||+.+|++||++.+|++.|+.
T Consensus 206 ~~~~~~~~~~~-------------~~~--------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 206 VKECVEKGYRM-------------EPP--------EGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHHHhCCCCC-------------CCC--------CcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 01111100000 000 0113357889999999999999999999998863
No 256
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.3e-33 Score=304.06 Aligned_cols=200 Identities=24% Similarity=0.341 Sum_probs=168.5
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|+..+.||.|++|.||+|++..+++.||||+++... ......+.+|++++++++|+||+++++++ .++...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhc-----ccCCcEE
Confidence 5888999999999999999998889999999986432 22335788999999999999999999985 4566789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+. ++|.+++.. .....+++..++.++.|++.||+||| ..+++|+||+|+||+++.++.+||+|
T Consensus 76 ~v~e~~~-~~l~~~~~~--------~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~d 143 (284)
T cd07860 76 LVFEFLH-QDLKKFMDA--------SPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLAD 143 (284)
T ss_pred EEeeccc-cCHHHHHHh--------CCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEee
Confidence 9999995 689888843 23456899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCC-CCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHE-TSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
||+++....... ......++..|+|||++.+.. ++.++||||||+++|||+||+.||..
T Consensus 144 fg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~ 203 (284)
T cd07860 144 FGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 203 (284)
T ss_pred ccchhhcccCcc--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 999876533221 122234688999999887654 58899999999999999999999965
No 257
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=6.4e-34 Score=305.92 Aligned_cols=274 Identities=18% Similarity=0.223 Sum_probs=199.7
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++|+||+++++++ ..+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVF-----PHGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCeeE
Confidence 4788899999999999999998889999999987543 23346799999999999999999999985 4467789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+ +++|.+++.. ....+++.+++.++.||+.||+||| +.+|+|+||||+||+++.++.++|+|
T Consensus 76 ~v~e~~-~~~L~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~d 142 (286)
T cd07832 76 LVMEYM-PSDLSEVLRD---------EERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIAD 142 (286)
T ss_pred EEeccc-CCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEee
Confidence 999999 9999999853 2356899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||++........ .......++..|+|||++.+. .++.++||||||+++|||+||..+|..... ......+...+..
T Consensus 143 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~~~~ 219 (286)
T cd07832 143 FGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND--IEQLAIVFRTLGT 219 (286)
T ss_pred eeecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH--HHHHHHHHHHcCC
Confidence 999986644321 112234588999999998654 468999999999999999999877754221 1111111111110
Q ss_pred ----hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 398 ----RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 398 ----~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
...++.+. .+.. . . ... ............+....+.+++.+||+.+|++|||+++++.
T Consensus 220 ~~~~~~~~~~~~---~~~~--~-~-~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 220 PNEETWPGLTSL---PDYN--K-I-TFP-ESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred CChHHHhhccCc---chhh--c-c-cCC-CCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00000000 0000 0 0 000 00000001111122356889999999999999999999875
No 258
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=8e-34 Score=299.87 Aligned_cols=249 Identities=23% Similarity=0.344 Sum_probs=197.0
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|+..+.||+|+||.||++....+++.+|||.+.... ......+.+|++++++++|+||+++++.+ ..++..+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCEEE
Confidence 5788999999999999999998899999999986432 23356789999999999999999999884 4566799
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC-CCeEEe
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE-MTACVA 317 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~-~~vKLs 317 (873)
+||||+++++|.+++.. .....+++..++.++.+++.||+||| +.+|+|+||+|+||+++++ +.+||+
T Consensus 76 lv~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~ 144 (256)
T cd08220 76 IVMEYAPGGTLAEYIQK--------RCNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIG 144 (256)
T ss_pred EEEecCCCCCHHHHHHH--------hcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEc
Confidence 99999999999999953 22345889999999999999999999 8999999999999999854 468999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
|||++....... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||....... ..
T Consensus 145 d~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--~~--------- 210 (256)
T cd08220 145 DFGISKILSSKS---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA--LV--------- 210 (256)
T ss_pred cCCCceecCCCc---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH--HH---------
Confidence 999998664322 1223457889999999998889999999999999999999999986521110 00
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+....... .+ ......+.+++..||+.+|++|||+.|++.
T Consensus 211 --~~~~~~~~~~-------------~~---------~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 211 --LKIMSGTFAP-------------IS---------DRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred --HHHHhcCCCC-------------CC---------CCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0000000000 00 001234778999999999999999999875
No 259
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.8e-33 Score=307.25 Aligned_cols=209 Identities=22% Similarity=0.297 Sum_probs=170.2
Q ss_pred CCCcceeecccCceEEEEEEEcC--CCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 161 GFSSENLIGAGNFASVYKGILFE--GAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~--~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
+|++.+.||+|+||.||+|.+.. +++.||+|.+.... ......+.+|+.++++++||||+++++++.. ....
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLE---HADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeC---CCCc
Confidence 47888999999999999999987 78999999997533 3334678889999999999999999999743 2236
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC----C
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND----E 311 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~----~ 311 (873)
..++||||+++ +|.+++... .......+++..++.|+.||+.||+||| +.+|+||||||+|||++. +
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~~-----~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~ 148 (316)
T cd07842 78 SVYLLFDYAEH-DLWQIIKFH-----RQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPER 148 (316)
T ss_pred eEEEEEeCCCc-CHHHHHHhh-----ccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCcc
Confidence 79999999975 777766321 1112346889999999999999999999 899999999999999999 9
Q ss_pred CCeEEeccccccccccccc-cccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCccc
Q 002857 312 MTACVADFGIARFLEATNE-QTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMF 381 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~ 381 (873)
+.+||+|||+++....... ........++..|+|||++.+. .++.++||||||+++|||++|+.||....
T Consensus 149 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 220 (316)
T cd07842 149 GVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE 220 (316)
T ss_pred ceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence 9999999999986543322 1122234578899999987764 57899999999999999999999997643
No 260
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.1e-34 Score=317.14 Aligned_cols=202 Identities=26% Similarity=0.293 Sum_probs=171.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||+++...+++.||+|++... .....+.+.+|+.++..++|+||+++++++ ..++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF-----QDENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE-----ecCCe
Confidence 4789999999999999999999888999999998642 222345688999999999999999999985 45678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl 143 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSK---------FEDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRL 143 (331)
T ss_pred EEEEEecCCCCcHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEE
Confidence 9999999999999999842 2346888899999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCC-----CCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-----HETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|||++..+...... ......||..|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 144 ~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 144 ADFGSCLRLLADGTV-QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred EECCceeecCCCCCc-cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 999998765432211 1122458999999999863 4578899999999999999999999965
No 261
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=8.3e-34 Score=305.27 Aligned_cols=248 Identities=25% Similarity=0.335 Sum_probs=198.4
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
.|+..+.||.|+||.||+|.+..++..||||++.... ......+.+|++++++++|+||+++++++ ..+...++
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 79 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKGTKLWI 79 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECCEEEE
Confidence 4677789999999999999998889999999987443 33456789999999999999999999986 44567999
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++|+|.+++.. ..+++.+...++.|++.||+||| +.+++|+||+|+||+++.++.++|+||
T Consensus 80 v~e~~~~~~L~~~i~~-----------~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~df 145 (277)
T cd06640 80 IMEYLGGGSALDLLRA-----------GPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADF 145 (277)
T ss_pred EEecCCCCcHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEccc
Confidence 9999999999998842 34788889999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
|++........ ......++..|+|||++.+..++.++||||||+++|||+||+.||........
T Consensus 146 g~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-------------- 209 (277)
T cd06640 146 GVAGQLTDTQI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-------------- 209 (277)
T ss_pred ccceeccCCcc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--------------
Confidence 99976543221 12234578899999999888899999999999999999999999865321100
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
...+.... .+. ........+.+++.+||+.+|++||++.+|+..
T Consensus 210 ~~~~~~~~---------------~~~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 210 LFLIPKNN---------------PPT------LTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhhhhcCC---------------CCC------CchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 00000000 000 011223457899999999999999999999765
No 262
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=5.7e-34 Score=305.26 Aligned_cols=263 Identities=17% Similarity=0.338 Sum_probs=199.1
Q ss_pred cCCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccccC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
++|++...||+|+||.||+|+... +.+.||+|.+...... ..+.+.+|++++++++|+||+++++++ ..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~ 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLC-----RE 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEE-----CC
Confidence 578889999999999999998753 3467999988654333 346799999999999999999999986 34
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
....++||||+++|+|.++++..... ........+++..++.++.||+.||+||| +.+|+||||||+||+++.++.
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~-~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~ 155 (275)
T cd05046 80 AEPHYMILEYTDLGDLKQFLRATKSK-DEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQRE 155 (275)
T ss_pred CCcceEEEEecCCCcHHHHHHhcccc-cccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCc
Confidence 56689999999999999999541100 00011236899999999999999999999 899999999999999999999
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~ 392 (873)
++|+|||+++...... ........++..|+|||.+.+..++.++||||||+++|+|++ |..||....... ...
T Consensus 156 ~~l~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--~~~--- 229 (275)
T cd05046 156 VKVSLLSLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--VLN--- 229 (275)
T ss_pred EEEcccccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--HHH---
Confidence 9999999987543221 111222346778999999988889999999999999999999 788885422111 000
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
.+....+ ++... ..+...+.+++.+||+.+|++||++.|++..|+
T Consensus 230 --------~~~~~~~----------------~~~~~-----~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 230 --------RLQAGKL----------------ELPVP-----EGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred --------HHHcCCc----------------CCCCC-----CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 0000000 00000 011335888999999999999999999999875
No 263
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7.5e-34 Score=310.44 Aligned_cols=257 Identities=21% Similarity=0.250 Sum_probs=198.4
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||++.+...++.||+|.+.... ......+.+|+++++.++|+||+++++.+ ..++.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSF-----ETKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ecCCE
Confidence 47889999999999999999998889999999987443 22345788999999999999999999985 45667
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++++|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~----------~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l 142 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKN----------IGALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKL 142 (305)
T ss_pred EEEEEecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEE
Confidence 8999999999999999942 345888999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccc-------------cccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCccccc
Q 002857 317 ADFGIARFLEATNE-------------QTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKD 383 (873)
Q Consensus 317 sDFGla~~~~~~~~-------------~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~ 383 (873)
+|||+++....... ........++..|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 143 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~ 222 (305)
T cd05609 143 TDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE 222 (305)
T ss_pred eeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999874211100 00111234788999999998888999999999999999999999998642111
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
. +......... ..|... ......+.+++.+||+.+|++||++.++.+
T Consensus 223 -----~------------~~~~~~~~~~----------~~~~~~------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ 269 (305)
T cd05609 223 -----E------------LFGQVISDDI----------EWPEGD------EALPADAQDLISRLLRQNPLERLGTGGAFE 269 (305)
T ss_pred -----H------------HHHHHHhccc----------CCCCcc------ccCCHHHHHHHHHHhccChhhccCccCHHH
Confidence 0 0000000000 000000 011234778999999999999999877766
Q ss_pred HHHH
Q 002857 464 GLRL 467 (873)
Q Consensus 464 ~Le~ 467 (873)
.|+.
T Consensus 270 ll~~ 273 (305)
T cd05609 270 VKQH 273 (305)
T ss_pred HHhC
Confidence 6654
No 264
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=323.42 Aligned_cols=254 Identities=27% Similarity=0.432 Sum_probs=208.8
Q ss_pred CcceeecccCceEEEEEEEcCC----CcEEEEEEeec-cCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 163 SSENLIGAGNFASVYKGILFEG----APAVAIKVFNF-LHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~----g~~VAVK~l~~-~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
...++||.|.||.||+|++..- .-.||||..+. ...+..+.|+.|+.+|++++|||||+++|+|.+ ...
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e------~P~ 465 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE------QPM 465 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec------cce
Confidence 4457899999999999987532 23589999875 344556789999999999999999999999864 348
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
+||||.++.|.|..||+. ....|+......++.||..||+||| +..+|||||..+|||+.....+||+
T Consensus 466 WivmEL~~~GELr~yLq~---------nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLa 533 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQ---------NKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLA 533 (974)
T ss_pred eEEEecccchhHHHHHHh---------ccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeec
Confidence 999999999999999963 4566888899999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||+++.+........+ ...-++.|||||.+.-.+++.+||||-|||.+||+++ |..||....+.+.
T Consensus 534 DFGLSR~~ed~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV----------- 601 (974)
T KOG4257|consen 534 DFGLSRYLEDDAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV----------- 601 (974)
T ss_pred ccchhhhccccchhhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce-----------
Confidence 99999988665443333 3446788999999999999999999999999999998 9999987543321
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
+-..-.++ ..| .+..|+..|..|+.+||..+|.+||++.|+...|..+..
T Consensus 602 ------I~~iEnGe-----------RlP-------~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 602 ------IGHIENGE-----------RLP-------CPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred ------EEEecCCC-----------CCC-------CCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 10000000 011 123467789999999999999999999999999998876
No 265
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.2e-33 Score=302.76 Aligned_cols=256 Identities=20% Similarity=0.280 Sum_probs=182.1
Q ss_pred eeecccCceEEEEEEEcCCC--cEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEe
Q 002857 166 NLIGAGNFASVYKGILFEGA--PAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g--~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
+.||+|+||.||+|....+. ..+++|.++... ....+.+.+|+.+++.++||||+++++.|. .....++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-----~~~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCV-----EAIPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEec-----CCCccEEEEe
Confidence 36999999999999764332 356677765433 234568999999999999999999999963 4556899999
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccc
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIA 322 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla 322 (873)
|+++|+|.++++.. ......+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 76 ~~~~~~L~~~l~~~------~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~ 146 (268)
T cd05086 76 YCELGDLKSYLSQE------QWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIG 146 (268)
T ss_pred cCCCCcHHHHHHhh------hcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccc
Confidence 99999999999531 011234667778899999999999999 899999999999999999999999999998
Q ss_pred cccccccccccccccccccccCCCcccCC-------CCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhc
Q 002857 323 RFLEATNEQTSSIGVKGTTGYIAPEYGMG-------HETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 323 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-------~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
................++..|+|||++.. ..++.++||||||+++|||++ |..||....... .+...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~---- 221 (268)
T cd05086 147 PSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE-VLNHV---- 221 (268)
T ss_pred cccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHH----
Confidence 64322211112223457889999998753 245789999999999999997 566775421110 00000
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
+.+....+.++.+.. + ....+.+++..|| .+|++||++.||++.|.
T Consensus 222 ~~~~~~~~~~~~~~~--------------~-----------~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 222 IKDQQVKLFKPQLEL--------------P-----------YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HhhcccccCCCccCC--------------C-----------CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 000000001110000 0 0124667888999 67999999999988773
No 266
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.1e-34 Score=306.89 Aligned_cols=281 Identities=21% Similarity=0.247 Sum_probs=202.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhcc-ceeeeeeeeccc-ccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRK-IIKVVTACSRVD-YQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpN-IV~llg~c~~~~-~~~~~ 235 (873)
..|...++||+|.||+||+|+.+.+|+.||+|.++.... .......+|+.+|++++|+| ||++++++.... +....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 345666889999999999999999999999999985543 24456789999999999999 999999975432 12233
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+.. +|.+++.... .....++...+..++.||++||+||| +++|+||||||.||||+++|.+|
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~------~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lK 160 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLP------KKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLK 160 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhcc------ccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEe
Confidence 78899999965 9999995411 11145666889999999999999999 99999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+|+.+.-.. ...+..++|..|+|||++.+. .|+...||||+|||+.||++++..|.+..+... +.......
T Consensus 161 laDFGlAra~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~q-l~~If~~l 237 (323)
T KOG0594|consen 161 LADFGLARAFSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQ-LFRIFRLL 237 (323)
T ss_pred eeccchHHHhcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHH-HHHHHHHc
Confidence 99999999654222 223445689999999999987 789999999999999999999999987544211 11111110
Q ss_pred Cch---hH---HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 395 LPE---RV---EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 395 ~~~---~l---~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
-.+ .+ ..+.+... .+ ...+.................+++.+|++.+|++|.|+..++.+
T Consensus 238 GtP~e~~Wp~v~~~~~~k~--~f---------~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 238 GTPNEKDWPGVSSLPDYKA--PF---------PKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCCccCCCCccccccccc--cC---------cCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 000 01 00000000 00 00000000011111111257789999999999999999988765
No 267
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.4e-33 Score=298.99 Aligned_cols=254 Identities=26% Similarity=0.322 Sum_probs=202.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
++|++.+.||+|++|.||+|++..+++.||||++..... .....+.+|+.++.+++|+||+++++++ ......+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAF-----YKEGEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----ccCCeEE
Confidence 468889999999999999999988899999999875443 3457899999999999999999999985 4457899
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCCeeeCCCCCeEEe
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCK-PPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s-~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
+||||+++++|.+++.. ...+++..++.++.|+++||+||| + .+++|+||+|+||+++.++.++|+
T Consensus 76 lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~ 142 (264)
T cd06623 76 IVLEYMDGGSLADLLKK----------VGKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIA 142 (264)
T ss_pred EEEEecCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEc
Confidence 99999999999999942 256899999999999999999999 8 999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
|||++.......... ....++..|+|||.+.+..++.++||||||+++|+|+||+.||....... .
T Consensus 143 df~~~~~~~~~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~---------- 208 (264)
T cd06623 143 DFGISKVLENTLDQC--NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS--F---------- 208 (264)
T ss_pred cCccceecccCCCcc--cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC--H----------
Confidence 999998664332221 23457889999999999999999999999999999999999997632200 0
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
.+++....... ..+.... .....+.+++.+||+.+|++||++.|+++.
T Consensus 209 --~~~~~~~~~~~-----------~~~~~~~------~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 209 --FELMQAICDGP-----------PPSLPAE------EFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --HHHHHHHhcCC-----------CCCCCcc------cCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 01111110000 0000000 012358889999999999999999999863
No 268
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.5e-33 Score=305.20 Aligned_cols=203 Identities=25% Similarity=0.399 Sum_probs=169.2
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++++|.+.+.||+|+||.||+|....++..||+|++..... .....+.+|+.+++.++|+||+++++++ ..+..
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDII-----HTKET 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEE-----ecCCe
Confidence 56889999999999999999999988899999999864432 2334678899999999999999999985 44567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+. ++|.+++.. ....+++..+..++.||+.||.||| +.+|+|+||||+|||++.++.+||
T Consensus 78 ~~lv~e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l 144 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQ---------HPGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKL 144 (291)
T ss_pred EEEEEeccc-CCHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEE
Confidence 899999995 677776632 2345778888999999999999999 889999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
+|||+++....... ......++..|+|||++.+. .++.++||||||+++|||++|+.||+..
T Consensus 145 ~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 145 ADFGLARAKSIPSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred eccccccccCCCCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 99999975432211 11223478899999998764 5788999999999999999999999764
No 269
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.3e-34 Score=317.94 Aligned_cols=202 Identities=24% Similarity=0.286 Sum_probs=172.2
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||++++..+++.||+|++... .......+.+|+.++..++|+||+++++++ ...+.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~-----~~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF-----QDENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 4789999999999999999999889999999998642 222335588899999999999999999985 45678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ....+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~---------~~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl 143 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSK---------FEDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRL 143 (331)
T ss_pred EEEEEeCCCCCcHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEE
Confidence 9999999999999999952 2346888899999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCC-----CCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-----HETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|||+++........ ......||..|+|||++.+ ..++.++||||||+++|||++|+.||..
T Consensus 144 ~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 144 ADFGSCLKMNQDGTV-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred EeccceeeccCCCce-eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 999999765432221 1223458999999998875 4678899999999999999999999965
No 270
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=4.8e-34 Score=316.55 Aligned_cols=202 Identities=25% Similarity=0.289 Sum_probs=171.2
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.++||+|+||.||++++..+++.||+|++... .......+.+|+.++..++|+||+++++++ .....
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF-----QDENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecCCE
Confidence 4788999999999999999999888999999998632 222334588899999999999999999985 45678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~---------~~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL 143 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSK---------FEDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRL 143 (332)
T ss_pred EEEEEeccCCCcHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEE
Confidence 9999999999999999952 2346888899999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccC-----CCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM-----GHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|||+++.+..... .......||..|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 144 ~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 144 ADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred eecchheecccCCc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 99999975433221 1122346899999999886 34678999999999999999999999965
No 271
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.3e-33 Score=303.53 Aligned_cols=253 Identities=22% Similarity=0.270 Sum_probs=191.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHH-HHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEV-MRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~i-L~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|++.+.||+|+||.||+|++..+++.||+|+++.... .....+..|+.+ ++.++|+||+++++++ ..+...
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~-----~~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGAL-----FREGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEE-----ecCCcE
Confidence 478899999999999999999988999999999875432 233456667665 5566899999999986 345568
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCC-CeeeccCCCCCeeeCCCCCeEE
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKP-PIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~-gIvHrDLKpsNILLd~~~~vKL 316 (873)
++||||++ |+|.+++... ......+++..++.++.||+.||+||| +. +++||||||+|||++.++.+||
T Consensus 76 ~lv~e~~~-~~l~~~l~~~------~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl 145 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKV------YDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKL 145 (283)
T ss_pred EEEhhhhc-ccHHHHHHHh------ccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEE
Confidence 99999996 6888887431 122356899999999999999999999 65 9999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCC----CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG----HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~----~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
+|||++....... ......++..|+|||++.+ ..++.++||||||+++|||++|+.||........
T Consensus 146 ~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------- 215 (283)
T cd06617 146 CDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ------- 215 (283)
T ss_pred eeccccccccccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH-------
Confidence 9999998653221 1122457889999998765 4568899999999999999999999864211100
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+.......... .+. ......+.+++.+||+.+|++||++.+|++
T Consensus 216 -----~~~~~~~~~~~~-------------~~~--------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 216 -----QLKQVVEEPSPQ-------------LPA--------EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred -----HHHHHHhcCCCC-------------CCc--------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111100000 000 011235788999999999999999999876
No 272
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.2e-33 Score=297.88 Aligned_cols=253 Identities=25% Similarity=0.363 Sum_probs=198.3
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|+..+.||+|+||.||+|....+++.||+|.++..... ..+.+..|++++++++|+||+++++++ ...+..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVE-----VHREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeE-----ecCCEEE
Confidence 578889999999999999999888999999998755443 557899999999999999999999985 4566789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+|+||+++++|.+++.. ...+++..+..|+.+++.||.||| +.+|+|+||+|+||++++++.+||+|
T Consensus 76 lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d 142 (264)
T cd06626 76 IFMEYCSGGTLEELLEH----------GRILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGD 142 (264)
T ss_pred EEEecCCCCcHHHHHhh----------cCCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcc
Confidence 99999999999999842 345788899999999999999999 89999999999999999999999999
Q ss_pred ccccccccccccccc--ccccccccccCCCcccCCCC---CCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 319 FGIARFLEATNEQTS--SIGVKGTTGYIAPEYGMGHE---TSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 319 FGla~~~~~~~~~~~--~~~~~Gt~~Y~APE~l~~~~---~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||++........... .....++..|+|||++.+.. .+.++||||||+++|||++|+.||....... ........
T Consensus 143 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-~~~~~~~~ 221 (264)
T cd06626 143 FGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-QIMFHVGA 221 (264)
T ss_pred cccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-HHHHHHhc
Confidence 999987644332111 11245788999999988766 8899999999999999999999996532110 00000000
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.. ....|.. ......+.+++.+||+.+|++|||+.|++.
T Consensus 222 ---------------~~---------~~~~~~~-------~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 222 ---------------GH---------KPPIPDS-------LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ---------------CC---------CCCCCcc-------cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00 0000100 011234678999999999999999999864
No 273
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.1e-33 Score=304.43 Aligned_cols=201 Identities=27% Similarity=0.360 Sum_probs=171.8
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++|+||+++++++. .++..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFR-----RKGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEE-----ECCEE
Confidence 36889999999999999999998889999999986432 233467899999999999999999999963 46679
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||++++.+..++. ....+++.+++.++.||+.||+||| ..+|+|+||+|+||++++++.+||+
T Consensus 76 ~iv~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~ 142 (288)
T cd07833 76 YLVFEYVERTLLELLEA----------SPGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLC 142 (288)
T ss_pred EEEEecCCCCHHHHHHh----------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEE
Confidence 99999999877776552 2345889999999999999999999 8899999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|||++......... ......++..|+|||++.+. .++.++||||||+++|+|++|+.||..
T Consensus 143 d~g~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~ 204 (288)
T cd07833 143 DFGFARALRARPAS-PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPG 204 (288)
T ss_pred eeecccccCCCccc-cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999876543321 22234578899999999888 889999999999999999999999865
No 274
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3e-34 Score=321.75 Aligned_cols=250 Identities=22% Similarity=0.333 Sum_probs=196.0
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|+..+.||+|+||.||++....+++.||||+++.. .......+..|+.++..++|+||+++++.+ ...+.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 4688999999999999999999989999999999743 223346788899999999999999999985 55678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||+++|+|.+++. ....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~----------~~~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL 142 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLM----------KKDTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKL 142 (360)
T ss_pred EEEEEeCCCCccHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEE
Confidence 999999999999999984 2456889999999999999999999 899999999999999999999999
Q ss_pred ecccccccccccccc---------------------------------ccccccccccccCCCcccCCCCCCcchhhHhH
Q 002857 317 ADFGIARFLEATNEQ---------------------------------TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSF 363 (873)
Q Consensus 317 sDFGla~~~~~~~~~---------------------------------~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSf 363 (873)
+|||+++.+...... .......||..|+|||++.+..++.++|||||
T Consensus 143 ~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSl 222 (360)
T cd05627 143 SDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSL 222 (360)
T ss_pred eeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccc
Confidence 999998754321100 00113469999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccch--hhHHHHh-------hcCchhHHHHhhhhhhhhhhHHH---HHhhhccCCCCch
Q 002857 364 GILLLEMFTGLRPSDDMFKDNL--NLQNWVQ-------SALPERVEEIVDTLFFKEIEEEE---TVYKYKKAPSSST 428 (873)
Q Consensus 364 GvvL~ELlTGk~Pf~~~~~~~~--~l~~~~~-------~~~~~~l~elid~~L~~~~~~r~---~~~~i~~~p~~~~ 428 (873)
||++|||+||+.||........ .+..|.. ..+.+...+++..++ .++..|. ...+++.|||...
T Consensus 223 Gvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~ 298 (360)
T cd05627 223 GVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEG 298 (360)
T ss_pred cceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCC
Confidence 9999999999999976332211 1111110 012345666776654 3555554 3567788888653
No 275
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.2e-33 Score=304.59 Aligned_cols=275 Identities=22% Similarity=0.254 Sum_probs=196.9
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc-----chhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD-----ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~-----~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
+|+..+.||+|+||.||+|.+..+++.||||.++..... ....+..|++++++++|+||+++++++ ....
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVF-----GHKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhhee-----ecCC
Confidence 477889999999999999999888999999999754322 234577899999999999999999996 3466
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+ +|+|.+++.. ....+++..++.++.||++||+||| +.+|+|+||+|+||+++.++.+|
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~---------~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~ 142 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKD---------KSIVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLK 142 (298)
T ss_pred EEEEEEccc-CCCHHHHHhc---------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEE
Confidence 789999999 8999999843 1236899999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+++....... ......++..|+|||++.+ ..++.++||||||+++|||++|..+|...... ..+.......
T Consensus 143 l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~~~ 219 (298)
T cd07841 143 LADFGLARSFGSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFEAL 219 (298)
T ss_pred EccceeeeeccCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHHHc
Confidence 999999986644321 1122346788999998865 45789999999999999999997777542211 1111111000
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.........+..-.... ......+... ...........+.+++.+||+.+|++|||+.||+.
T Consensus 220 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 220 GTPTEENWPGVTSLPDY------VEFKPFPPTP-LKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred CCCchhhhhhccccccc------ccccccCCcc-hhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 00000000000000000 0000000000 01111222456889999999999999999999876
No 276
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.6e-34 Score=346.74 Aligned_cols=261 Identities=19% Similarity=0.265 Sum_probs=198.1
Q ss_pred HHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccC
Q 002857 156 YSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 156 ~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
....++|.+.+.||+|+||.||+|.+..++..||+|++.... ......|..|+.+|++|+|||||++++++.. ..
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d---e~ 85 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN---KA 85 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe---cC
Confidence 334578999999999999999999999999999999987432 2334678999999999999999999998642 33
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCC----CCCeeeccCCCCCeeeC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGC----KPPIAHCDIKPSNILLN 309 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~----s~gIvHrDLKpsNILLd 309 (873)
....+|||||+++|+|.++|... ......+++..++.|+.||+.||+|||... ..+||||||||+||||+
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~------~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~ 159 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKC------YKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLS 159 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHH------hhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEee
Confidence 45789999999999999998531 122356899999999999999999999321 14599999999999996
Q ss_pred C-----------------CCCeEEeccccccccccccccccccccccccccCCCcccCC--CCCCcchhhHhHHHHHHHH
Q 002857 310 D-----------------EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG--HETSSYGDVYSFGILLLEM 370 (873)
Q Consensus 310 ~-----------------~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~--~~~s~ksDVwSfGvvL~EL 370 (873)
. ...+||+|||+++.+.... ......||+.|+|||++.+ ..++.++||||||||||||
T Consensus 160 s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYEL 236 (1021)
T PTZ00266 160 TGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYEL 236 (1021)
T ss_pred cCccccccccccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHH
Confidence 4 2358999999998653321 1223468999999999864 4588999999999999999
Q ss_pred HhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhcc
Q 002857 371 FTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAE 450 (873)
Q Consensus 371 lTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~ 450 (873)
+||+.||..... ...++ ..+. ..+ ..+.. .....+.+|+..||+.
T Consensus 237 LTGk~PF~~~~~----~~qli---------~~lk----~~p----------~lpi~--------~~S~eL~dLI~~~L~~ 281 (1021)
T PTZ00266 237 CSGKTPFHKANN----FSQLI---------SELK----RGP----------DLPIK--------GKSKELNILIKNLLNL 281 (1021)
T ss_pred HHCCCCCCcCCc----HHHHH---------HHHh----cCC----------CCCcC--------CCCHHHHHHHHHHhcC
Confidence 999999964211 00000 0000 000 00000 0123478899999999
Q ss_pred CcCCCCCHHHHHH
Q 002857 451 LPGERMKINDVEL 463 (873)
Q Consensus 451 dP~eRPTm~EVl~ 463 (873)
+|.+||++.|++.
T Consensus 282 dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 282 SAKERPSALQCLG 294 (1021)
T ss_pred ChhHCcCHHHHhc
Confidence 9999999999984
No 277
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-33 Score=304.74 Aligned_cols=254 Identities=22% Similarity=0.289 Sum_probs=195.6
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
++|++.+.||+|+||.||++.+..++..||+|.++... ......+.+|++++++++|+||+++++.+ ...+..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF-----FIEGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhe-----ecCCeEE
Confidence 36788999999999999999998889999999887432 22346788999999999999999999985 4467899
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|..++... .....+++..+..++.||+.||.|||+ +.+|+|+||||+||+++.++.+||+|
T Consensus 76 lv~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d 146 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGG-------VATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCD 146 (286)
T ss_pred EEEeecCCCCHHHHHHhc-------cccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEee
Confidence 999999999999988530 113468999999999999999999993 35999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCC------CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH------ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~------~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
||++..+.... .....++..|+|||++.+. .++.++|||||||++|||++|+.||....... ...
T Consensus 147 fg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~--- 217 (286)
T cd06622 147 FGVSGNLVASL----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--IFA--- 217 (286)
T ss_pred cCCcccccCCc----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--HHH---
Confidence 99997653221 1223478899999998554 35889999999999999999999996421110 000
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+..+.+... +... ......+.+++.+||+.+|++||++.+++.
T Consensus 218 -----~~~~~~~~~~----------------~~~~------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 218 -----QLSAIVDGDP----------------PTLP------SGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred -----HHHHHhhcCC----------------CCCC------cccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 0111111000 0000 012335778999999999999999998876
No 278
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.5e-33 Score=303.17 Aligned_cols=202 Identities=24% Similarity=0.374 Sum_probs=168.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
-++|++.+.||+|++|.||+|....+++.||||.+..... .....+.+|++++++++|+||+++++++ ..+...
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 78 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDII-----HTKKTL 78 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEE-----ecCCeE
Confidence 3678999999999999999999988899999999874332 2234577899999999999999999985 456789
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+.+ +|.+++.. ....+++.....++.||+.||.||| +.+|+||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~~-~L~~~~~~---------~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~ 145 (291)
T cd07844 79 TLVFEYLDT-DLKQYMDD---------CGGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLA 145 (291)
T ss_pred EEEEecCCC-CHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEEC
Confidence 999999975 99998842 2346888999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
|||+++...... .......++..|+|||++.+ ..++.++||||||+++|||++|+.||...
T Consensus 146 dfg~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 207 (291)
T cd07844 146 DFGLARAKSVPS--KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGS 207 (291)
T ss_pred ccccccccCCCC--ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999987542211 11122346788999998876 45789999999999999999999999653
No 279
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.6e-33 Score=308.81 Aligned_cols=252 Identities=26% Similarity=0.322 Sum_probs=196.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc---chhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD---ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~---~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|+..+.||+|+||.||+|....+++.||+|.+...... ..+.+..|+++++.++|+||+++++.+ .....
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASF-----QTETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeee-----ecCCE
Confidence 4688899999999999999999888999999998754322 345788999999999999999999985 45667
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+.+++|.+++.. .....+++..+..++.||+.||+||| +.+++|+||||+||+++.++.++|
T Consensus 76 ~~lv~e~~~~~~L~~~~~~--------~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l 144 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQR--------QPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIML 144 (316)
T ss_pred EEEEEEecCCCCHHHHHHh--------CCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEE
Confidence 8999999999999999853 22356899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccc---------------------------cccccccccccCCCcccCCCCCCcchhhHhHHHHHHH
Q 002857 317 ADFGIARFLEATNEQT---------------------------SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLE 369 (873)
Q Consensus 317 sDFGla~~~~~~~~~~---------------------------~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~E 369 (873)
+|||++.......... ......|+..|+|||++.+..++.++||||||+++|+
T Consensus 145 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~ 224 (316)
T cd05574 145 SDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYE 224 (316)
T ss_pred eecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHH
Confidence 9999987543221100 1112357889999999999889999999999999999
Q ss_pred HHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhc
Q 002857 370 MFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSA 449 (873)
Q Consensus 370 LlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~ 449 (873)
|++|+.||....... .+..+.+.... .+... .....+.+++.+||+
T Consensus 225 l~~g~~pf~~~~~~~-------------~~~~~~~~~~~--------------~~~~~-------~~~~~~~~li~~~l~ 270 (316)
T cd05574 225 MLYGTTPFKGSNRDE-------------TFSNILKKEVT--------------FPGSP-------PVSSSARDLIRKLLV 270 (316)
T ss_pred HhhCCCCCCCCchHH-------------HHHHHhcCCcc--------------CCCcc-------ccCHHHHHHHHHHcc
Confidence 999999996532111 11111111000 00000 013358899999999
Q ss_pred cCcCCCCCHHHH
Q 002857 450 ELPGERMKINDV 461 (873)
Q Consensus 450 ~dP~eRPTm~EV 461 (873)
.+|++|||+...
T Consensus 271 ~~p~~R~s~~~~ 282 (316)
T cd05574 271 KDPSKRLGSKRG 282 (316)
T ss_pred CCHhHCCCchhh
Confidence 999999994333
No 280
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=6.6e-34 Score=309.69 Aligned_cols=248 Identities=20% Similarity=0.252 Sum_probs=194.8
Q ss_pred CcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEe
Q 002857 163 SSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
.....||+|+||.||++....++..||||.+........+.+.+|+.+++.++|+||+++++.+ ..++..++|||
T Consensus 25 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~-----~~~~~~~lv~e 99 (292)
T cd06658 25 DSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY-----LVGDELWVVME 99 (292)
T ss_pred hhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhe-----ecCCeEEEEEe
Confidence 3346799999999999999888999999998765555567789999999999999999999985 44667899999
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccc
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIA 322 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla 322 (873)
|+++++|.+++.. ..+++.+++.++.||+.||+||| +.+|+||||||+||++++++.++|+|||++
T Consensus 100 ~~~~~~L~~~~~~-----------~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~ 165 (292)
T cd06658 100 FLEGGALTDIVTH-----------TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFC 165 (292)
T ss_pred CCCCCcHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcch
Confidence 9999999998732 34788999999999999999999 889999999999999999999999999998
Q ss_pred cccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHH
Q 002857 323 RFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEI 402 (873)
Q Consensus 323 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~el 402 (873)
........ ......++..|+|||++.+..++.++||||||+++|||++|+.||....... ....+ ...
T Consensus 166 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~~--------~~~ 233 (292)
T cd06658 166 AQVSKEVP--KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ--AMRRI--------RDN 233 (292)
T ss_pred hhcccccc--cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH--------Hhc
Confidence 75533221 1223458899999999988889999999999999999999999986421110 00000 000
Q ss_pred hhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 403 VDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 403 id~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
....+.. . ......+.+++.+||+.+|++|||+.||++.
T Consensus 234 ~~~~~~~--------------------~---~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 234 LPPRVKD--------------------S---HKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CCCcccc--------------------c---cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0000000 0 0012246789999999999999999998863
No 281
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.6e-34 Score=317.99 Aligned_cols=192 Identities=27% Similarity=0.331 Sum_probs=160.5
Q ss_pred ecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhh---hhccceeeeeeeecccccCCceEEEEE
Q 002857 168 IGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNI---IHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 168 LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L---~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
||+|+||.||+|++..+++.||||++.... ......+..|..++.+. +||||++++..+ ......++||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEEEE
Confidence 799999999999998899999999986422 12233455677777665 699999999885 4567899999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|.+++. ....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 76 e~~~~g~L~~~l~----------~~~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~ 142 (330)
T cd05586 76 DYMSGGELFWHLQ----------KEGRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGL 142 (330)
T ss_pred cCCCCChHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCc
Confidence 9999999999884 2456889999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
++...... .......||..|+|||++.+. .++.++|||||||++|||+||+.||..
T Consensus 143 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~ 199 (330)
T cd05586 143 SKANLTDN--KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA 199 (330)
T ss_pred CcCCCCCC--CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence 97542222 112235689999999998765 479999999999999999999999965
No 282
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.3e-33 Score=300.59 Aligned_cols=254 Identities=23% Similarity=0.345 Sum_probs=196.7
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC------cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH------DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~------~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
+|+..+.||+|++|.||+|....+++.||+|++..... ...+.+.+|++++++++|+||+++++++ ...
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT-----CED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee-----ccC
Confidence 47888999999999999999988999999999864321 1246789999999999999999999995 456
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC-C
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM-T 313 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~-~ 313 (873)
+..++||||+++++|.+++.. ...+++..++.++.||+.||.||| +.+++|+||+|+||+++.++ .
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~ 142 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSK----------YGAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQR 142 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHH----------hCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCE
Confidence 678999999999999999842 346888999999999999999999 89999999999999998775 6
Q ss_pred eEEecccccccccccccc--ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHH
Q 002857 314 ACVADFGIARFLEATNEQ--TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWV 391 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~ 391 (873)
+||+|||++......... .......++..|+|||++.+..++.++||||||+++|+|++|..||....... .....
T Consensus 143 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~ 220 (268)
T cd06630 143 LRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN--HLALI 220 (268)
T ss_pred EEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc--hHHHH
Confidence 999999999866433211 11123457889999999988889999999999999999999999986421110 00000
Q ss_pred hhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 392 QSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 392 ~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+..... .+.. .......+.+++.+||+.+|++||++.|++.
T Consensus 221 --------~~~~~~~~---------------~~~~------~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 221 --------FKIASATT---------------APSI------PEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred --------HHHhccCC---------------CCCC------chhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 00000000 0000 0011235778999999999999999999864
No 283
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1e-33 Score=323.28 Aligned_cols=197 Identities=26% Similarity=0.352 Sum_probs=171.1
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-h-----ccceeeeeeeecccccCC
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-H-----RKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-H-----pNIV~llg~c~~~~~~~~ 234 (873)
+|.+.++||+|.||.|-+|.+..+++.||||+++... .-..+-+.|+.+|..|+ | -|+|++++++ ...
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F-----~fr 260 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF-----YFR 260 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc-----ccc
Confidence 7899999999999999999999999999999998543 33456778999999997 4 4899999995 567
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC--C
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE--M 312 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~--~ 312 (873)
++.|||+|.+. -+|+++|+. +.-..++...+..|+.||+.||.+|| ..+|||+||||+||||.+. .
T Consensus 261 ~HlciVfELL~-~NLYellK~--------n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~ 328 (586)
T KOG0667|consen 261 NHLCIVFELLS-TNLYELLKN--------NKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRS 328 (586)
T ss_pred cceeeeehhhh-hhHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcC
Confidence 89999999995 499999975 45567999999999999999999999 8999999999999999643 4
Q ss_pred CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 313 TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
.+||+|||.|.+..... . ....+..|+|||++.|.+|+.+.||||||||+.||++|.+.|.+.
T Consensus 329 ~vKVIDFGSSc~~~q~v----y-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 329 RIKVIDFGSSCFESQRV----Y-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred ceeEEecccccccCCcc----e-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 89999999998653321 1 455788999999999999999999999999999999998888763
No 284
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.6e-33 Score=307.49 Aligned_cols=247 Identities=20% Similarity=0.248 Sum_probs=195.2
Q ss_pred cceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEee
Q 002857 164 SENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEF 243 (873)
Q Consensus 164 ~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey 243 (873)
....||+|+||.||+|....+++.||+|++........+.+.+|+.+++.++||||+++++++ ..++..++||||
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~iv~e~ 99 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY-----LVGEELWVLMEF 99 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhe-----eeCCeEEEEEec
Confidence 345799999999999999888999999998765555567789999999999999999999985 445678999999
Q ss_pred cCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccc
Q 002857 244 MPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIAR 323 (873)
Q Consensus 244 ~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~ 323 (873)
+++++|.+++. ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 100 ~~~~~L~~~~~-----------~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~ 165 (297)
T cd06659 100 LQGGALTDIVS-----------QTRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCA 165 (297)
T ss_pred CCCCCHHHHHh-----------hcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHh
Confidence 99999998773 235789999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHh
Q 002857 324 FLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIV 403 (873)
Q Consensus 324 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~eli 403 (873)
....... ......++..|+|||++.+..++.++||||||+++|||++|+.||...... .....+...
T Consensus 166 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~--------- 232 (297)
T cd06659 166 QISKDVP--KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLRDS--------- 232 (297)
T ss_pred hcccccc--cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhcc---------
Confidence 5533221 122345889999999999888999999999999999999999998642111 000000000
Q ss_pred hhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 404 DTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 404 d~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
.. +.... .......+.+++.+||+.+|++||++.+|++.
T Consensus 233 ---~~---------------~~~~~----~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 233 ---PP---------------PKLKN----AHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ---CC---------------CCccc----cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00 00000 00012247789999999999999999999874
No 285
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.9e-33 Score=304.83 Aligned_cols=197 Identities=26% Similarity=0.382 Sum_probs=173.3
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||++.+..+++.||+|++.... ....+.+.+|++++++++|+||+++++++ ..+..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSF-----QDDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCe
Confidence 47889999999999999999998889999999986432 23346788999999999999999999985 45667
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++++|.+++.. ...+++..+..++.||+.||.||| +.+|+|+||+|+|||++.++.+||
T Consensus 76 ~~~v~e~~~~~~L~~~~~~----------~~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl 142 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRK----------SGRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKI 142 (290)
T ss_pred EEEEEecCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEE
Confidence 9999999999999999842 356889999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|||+++..... .....++..|+|||.+.+...+.++||||||+++|+|++|+.||..
T Consensus 143 ~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 200 (290)
T cd05580 143 TDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFD 200 (290)
T ss_pred eeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 999999865432 2234588999999999888889999999999999999999999865
No 286
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3e-33 Score=310.08 Aligned_cols=286 Identities=20% Similarity=0.237 Sum_probs=203.1
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|++.+.||+|+||.||+|....+++.||+|++.... ....+.+.+|+.+|++++|+||+++++++.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 478999999999999999999998899999999987432 233467888999999999999999998764322 33457
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+. ++|.+++. ....+++..+..++.||+.||+||| ..+|+||||||+||++++++.+||
T Consensus 83 ~~lv~e~~~-~~l~~~~~----------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl 148 (334)
T cd07855 83 VYVVMDLME-SDLHHIIH----------SDQPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRI 148 (334)
T ss_pred EEEEEehhh-hhHHHHhc----------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEe
Confidence 899999995 68998884 2345899999999999999999999 899999999999999999999999
Q ss_pred ecccccccccccccc--ccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 317 ADFGIARFLEATNEQ--TSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 317 sDFGla~~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+|||+++........ .......++..|+|||++.+ ..++.++||||||+++|||++|+.||...... .....+..
T Consensus 149 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~~~~~~~~ 226 (334)
T cd07855 149 GDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--HQLKLILS 226 (334)
T ss_pred cccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH--HHHHHHHH
Confidence 999999765432211 11123468899999998765 46889999999999999999999999653211 11111111
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
.......++.+........ ...+.....+. .............+.+++.+||+.+|.+|||+.+++..
T Consensus 227 ~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 227 VLGSPSEEVLNRIGSDRVR--KYIQNLPRKQP-VPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred HhCCChhHhhhhhchhhHH--HHHhhcccCCC-CCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1111111111111000000 00000000000 00011111224568899999999999999999988763
No 287
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3.9e-33 Score=299.25 Aligned_cols=275 Identities=21% Similarity=0.275 Sum_probs=198.1
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
|++.+.||+|+||.||+|++..+++.+|+|++.... ......+.+|++++++++|+|++++++++... .....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---GKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC---CCCcEEE
Confidence 567899999999999999998889999999998553 33345788999999999999999999996421 1367999
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++ +|.+++.. ....+++..++.++.||+.||+||| ..+++|+||+|+||++++++.+||+||
T Consensus 78 v~e~~~~-~l~~~~~~---------~~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~ 144 (287)
T cd07840 78 VFEYMDH-DLTGLLDS---------PEVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADF 144 (287)
T ss_pred Eeccccc-cHHHHHhc---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccc
Confidence 9999975 89888742 2256899999999999999999999 889999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc--
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP-- 396 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~-- 396 (873)
|++........ .......++..|+|||.+.+ ..++.++||||||+++|||+||+.||....... .+.. +.....
T Consensus 145 g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~-~~~~-~~~~~~~~ 221 (287)
T cd07840 145 GLARPYTKRNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE-QLEK-IFELCGSP 221 (287)
T ss_pred cceeeccCCCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHH-HHHHhCCC
Confidence 99986644322 11223346788999997765 457899999999999999999999997532211 1111 111000
Q ss_pred --hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHH-HHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 --ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILE-CLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 --~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e-~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.....+.+....... ....+........... +...+.+++.+||+.+|.+||++.++++
T Consensus 222 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 222 TDENWPGVSKLPWFENL--------KPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred chhhccccccchhhhhc--------cccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000000000000 0000000111111112 1456889999999999999999999875
No 288
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.2e-33 Score=292.50 Aligned_cols=254 Identities=23% Similarity=0.332 Sum_probs=200.8
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|+..+.||+|++|.||+|....+++.|++|++..... ...+.+.+|++++++++|+||+++++.+... .....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE---EKNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC---CCCeEE
Confidence 47788999999999999999988899999999875442 3457899999999999999999999986321 126789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+|+||+++++|.+++.. ...+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.++|+|
T Consensus 78 lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d 144 (260)
T cd06606 78 IFLEYVSGGSLSSLLKK----------FGKLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLAD 144 (260)
T ss_pred EEEEecCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcc
Confidence 99999999999999843 237899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||.+................++..|+|||.+.+...+.++||||||+++++|++|..||....... ...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~------- 213 (260)
T cd06606 145 FGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM----AAL------- 213 (260)
T ss_pred cccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH----HHH-------
Confidence 999987654432111233458899999999988889999999999999999999999997632110 000
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+.. ... .+... ......+.+++.+|++.+|++||++.|++.
T Consensus 214 -~~~~~---~~~------------~~~~~------~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 214 -YKIGS---SGE------------PPEIP------EHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred -Hhccc---cCC------------CcCCC------cccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 00000 000 00000 011235788999999999999999999875
No 289
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.2e-33 Score=296.74 Aligned_cols=250 Identities=22% Similarity=0.293 Sum_probs=196.9
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|++.+.||+|+||.||+|.+..++..||+|.+.... ....+.+.+|++++++++|+||+++++.+ ......+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASF-----QENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhhee-----ccCCeEE
Confidence 5788999999999999999999889999999986432 23346788999999999999999999985 4566899
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC-CeEEe
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM-TACVA 317 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~-~vKLs 317 (873)
+|+||+++++|.+++.. .....+++..++.++.|++.||.||| +.+|+|+||||+||++++++ .+||+
T Consensus 76 lv~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~ 144 (257)
T cd08225 76 IVMEYCDGGDLMKRINR--------QRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLG 144 (257)
T ss_pred EEEecCCCCcHHHHHHh--------ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEec
Confidence 99999999999999843 22345789999999999999999999 89999999999999999875 56999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
|||.+........ ......|+..|+|||++.+..++.++||||||+++|||++|..||..... ..++.
T Consensus 145 d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~----- 212 (257)
T cd08225 145 DFGIARQLNDSME--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-----HQLVL----- 212 (257)
T ss_pred ccccchhccCCcc--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHH-----
Confidence 9999986643221 11223588899999999888899999999999999999999999864211 11111
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+....+.. ... .....+.+++.+||+.+|++|||+.||+.
T Consensus 213 ---~~~~~~~~~---------------~~~-------~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 213 ---KICQGYFAP---------------ISP-------NFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred ---HHhcccCCC---------------CCC-------CCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 111100000 000 01224778999999999999999999875
No 290
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.9e-33 Score=300.16 Aligned_cols=248 Identities=25% Similarity=0.355 Sum_probs=195.5
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhh---hccceeeeeeeecccccCCce
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNII---HRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~---HpNIV~llg~c~~~~~~~~~~ 236 (873)
.|+..+.||+|+||.||+|.+..+++.||+|.++... ......+.+|+.++++++ |+|++++++++ ..+..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~-----~~~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSY-----LKGPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeee-----eeCCE
Confidence 4778899999999999999998899999999987442 334467889999999997 99999999986 34567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++++|.+++.. ..+++..++.++.|++.||.||| ..+|+|+||+|+||+++.++.++|
T Consensus 77 ~~lv~e~~~~~~L~~~~~~-----------~~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l 142 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKA-----------GPIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKL 142 (277)
T ss_pred EEEEEecCCCCcHHHHHHc-----------cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEE
Confidence 8999999999999998842 26889999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||++........ ......|+..|+|||++.+. .++.++||||||+++|+|++|+.||...... ....
T Consensus 143 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~--- 212 (277)
T cd06917 143 CDFGVAALLNQNSS--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMM--- 212 (277)
T ss_pred ccCCceeecCCCcc--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhh---
Confidence 99999987644321 12234588899999988654 4688999999999999999999999652111 0000
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+... . .+.... . .....+.+++.+||+.+|++||++.|++.
T Consensus 213 ------~~~~~---~------------~~~~~~-~----~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 213 ------LIPKS---K------------PPRLED-N----GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred ------ccccC---C------------CCCCCc-c----cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 00000 0 000000 0 01235778999999999999999999976
No 291
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.8e-33 Score=311.74 Aligned_cols=204 Identities=25% Similarity=0.265 Sum_probs=171.0
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhhhhccceeeeeeeeccc-ccC
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVD-YQG 233 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~-~~~ 233 (873)
...++|+..+.||+|+||.||+|....+++.||||++... .......+.+|+.++++++|+||+++++++.... +.+
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 3457899999999999999999999889999999998642 2233456788999999999999999999864321 122
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
....++||||+. ++|.+.+.. .+++..+..++.|++.||+||| ..+|+||||||+||+++.++.
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~------------~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~ 156 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQM------------DLDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCT 156 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhh------------cCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCC
Confidence 345799999995 588887732 2788889999999999999999 899999999999999999999
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+||+|||+++....... .....++..|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 157 ~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 219 (353)
T cd07850 157 LKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPG 219 (353)
T ss_pred EEEccCccceeCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence 99999999986533211 2233578899999999999999999999999999999999999965
No 292
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.7e-33 Score=304.81 Aligned_cols=251 Identities=23% Similarity=0.276 Sum_probs=199.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
++|.+.+.||+|+||.||+|....++..||+|.+........+.+.+|+.++++++||||+++++++ ...+..++
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~l 93 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSY-----LVGDELWV 93 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhhee-----eeCCcEEE
Confidence 5788899999999999999998888899999998755555557789999999999999999999986 34567899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
|+||+++++|.+++.. ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+||
T Consensus 94 v~e~~~~~~L~~~~~~-----------~~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~df 159 (293)
T cd06647 94 VMEYLAGGSLTDVVTE-----------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDF 159 (293)
T ss_pred EEecCCCCcHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccC
Confidence 9999999999999842 34788899999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
|++........ ......++..|+|||++.+..++.++||||||+++|+|++|+.||........ +.. +..
T Consensus 160 g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~-~~~------ 229 (293)
T cd06647 160 GFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYL-IAT------ 229 (293)
T ss_pred cceeccccccc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eee-hhc------
Confidence 99875543222 12234588899999999888899999999999999999999999965321110 000 000
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
... +.... .......+.+++.+||+.+|++||++.+++..
T Consensus 230 --------~~~-------------~~~~~----~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 230 --------NGT-------------PELQN----PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred --------CCC-------------CCCCC----ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 00000 00112347789999999999999999998864
No 293
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.8e-33 Score=290.27 Aligned_cols=250 Identities=25% Similarity=0.328 Sum_probs=200.1
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
+|+..+.||+|++|.||++.+..+++.+++|++..........+.+|++++++++|+||+++++++ ......+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSY-----LKKDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEE-----ecCCeEEEE
Confidence 477889999999999999999888999999999765544567899999999999999999999985 345678999
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccc
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFG 320 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFG 320 (873)
+||+++++|.+++.. ....+++..+..++.|++.||.||| ..+++||||+|+||++++++.++|+|||
T Consensus 76 ~e~~~~~~L~~~~~~---------~~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~ 143 (253)
T cd05122 76 MEFCSGGSLKDLLKS---------TNQTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFG 143 (253)
T ss_pred EecCCCCcHHHHHhh---------cCCCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecc
Confidence 999999999999843 2256899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHH
Q 002857 321 IARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVE 400 (873)
Q Consensus 321 la~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~ 400 (873)
.+........ .....++..|+|||++.+..++.++||||||+++|+|++|+.||........ . .
T Consensus 144 ~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~------------~ 207 (253)
T cd05122 144 LSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA-L------------F 207 (253)
T ss_pred cccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH-H------------H
Confidence 9986644321 2334588999999999888899999999999999999999999865311100 0 0
Q ss_pred HHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 401 EIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 401 elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.. ...... ..+.. ......+.+++.+||+.+|++|||+.||++
T Consensus 208 ~~-~~~~~~------------~~~~~-------~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 208 KI-ATNGPP------------GLRNP-------EKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HH-HhcCCC------------CcCcc-------cccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 000000 00000 001234788999999999999999999875
No 294
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=7e-33 Score=297.27 Aligned_cols=275 Identities=21% Similarity=0.228 Sum_probs=193.8
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhh-hccceeeeeeeecccccCCceEEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
|++.+.||+|+||.||+|+...+++.||+|+++... .........|+.++.++. |+||+++++++.. ...+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~---~~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFD---RKTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEec---CCCCcEEE
Confidence 567889999999999999998889999999987432 222234567899999885 9999999999742 22367899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||++ |+|.+++.. ....+++.+++.++.||+.||+||| ..+|+||||+|+||+++. +.+||+||
T Consensus 78 v~e~~~-~~l~~~l~~---------~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~df 143 (282)
T cd07831 78 VFELMD-MNLYELIKG---------RKRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADF 143 (282)
T ss_pred EEecCC-ccHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEec
Confidence 999996 588887742 2356899999999999999999999 899999999999999999 99999999
Q ss_pred ccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
|+++........ ....++..|+|||++.. ..++.++|||||||++|||++|+.||..... ..............
T Consensus 144 g~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~~ 218 (282)
T cd07831 144 GSCRGIYSKPPY---TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGTP 218 (282)
T ss_pred ccccccccCCCc---CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCCC
Confidence 999865432221 22347889999997654 5578899999999999999999999965321 11112221111111
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..++. ..+...... ...+.. ................+.+++.+||+.+|++||++.++++
T Consensus 219 ~~~~~-~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 219 DAEVL-KKFRKSRHM---NYNFPS-KKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred CHHHH-Hhhcccccc---cccCcc-cccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 11110 000000000 000000 0000001111223457899999999999999999999875
No 295
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=7e-33 Score=301.34 Aligned_cols=208 Identities=21% Similarity=0.298 Sum_probs=169.1
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccc---cC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY---QG 233 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~---~~ 233 (873)
.++|++.++||+|+||.||+|....+++.||||.+.... ......+.+|++++++++||||++++++|..... ..
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357999999999999999999998899999999986432 2223456789999999999999999998754321 12
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
....++||||+.+ +|.+++.. ....+++.+++.++.||+.||.||| +.+|+|+||||+||+++.++.
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~ 157 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSN---------KNVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGI 157 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCc
Confidence 3457999999964 88887742 2346899999999999999999999 889999999999999999999
Q ss_pred eEEecccccccccccccc--ccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 314 ACVADFGIARFLEATNEQ--TSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+||+|||++..+...... .......++..|+|||++.+. .++.++||||||+++|||+||+.||..
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~ 226 (310)
T cd07865 158 LKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQG 226 (310)
T ss_pred EEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 999999999865432211 111233578899999987665 478899999999999999999999865
No 296
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=6.6e-33 Score=298.28 Aligned_cols=199 Identities=23% Similarity=0.337 Sum_probs=167.3
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
|++.+.||.|++|.||+|.+..++..||+|++.... ......+.+|++++++++|+|++++++++ ..++..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~-----~~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVV-----HSENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhhee-----ccCCeEEE
Confidence 567899999999999999998899999999987443 22335788999999999999999999996 44578999
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||++ ++|.+++.. .....+++..++.++.|+++||+||| +.+++||||+|+||+++.++.++|+||
T Consensus 76 v~e~~~-~~l~~~~~~--------~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df 143 (283)
T cd07835 76 VFEFLD-LDLKKYMDS--------SPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADF 143 (283)
T ss_pred EEeccC-cCHHHHHhh--------CCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeec
Confidence 999995 699998843 12246899999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|+++....... ......++..|+|||++.+. .++.++||||||+++|||++|+.||..
T Consensus 144 ~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 202 (283)
T cd07835 144 GLARAFGVPVR--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPG 202 (283)
T ss_pred ccccccCCCcc--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99975532211 11223468899999987664 568899999999999999999999965
No 297
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5.9e-33 Score=300.47 Aligned_cols=283 Identities=17% Similarity=0.181 Sum_probs=196.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhh-hccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||+|.+..+++.||||+++.... .....+.+|+.+++++. |+||+++++++..........
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 468899999999999999999988999999999864322 23467888999999995 699999999875433222334
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC-CCCeE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND-EMTAC 315 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~-~~~vK 315 (873)
.++||||+++ +|.+++... .......+++..++.++.||+.||.||| ..+|+||||||+||+++. ++.+|
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~-----~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~k 151 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSN-----GRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLK 151 (295)
T ss_pred EEEEeeccCc-CHHHHHHHh-----cccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEE
Confidence 7999999985 898888431 1112346899999999999999999999 899999999999999998 88999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+++.+..... ......++..|+|||++.+ ..++.++||||||+++|||++|..||....... .+.......
T Consensus 152 l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~ 228 (295)
T cd07837 152 IADLGLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFKLL 228 (295)
T ss_pred EeecccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHh
Confidence 999999975532211 1122346788999998765 457899999999999999999999986532111 111111000
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCc--hhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSS--TQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~--~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.... ...... ... .......+... ............+.+++.+||+.+|++||++.|++.
T Consensus 229 ~~~~-~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 229 GTPT-EQVWPG-VSK-------LRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CCCC-hhhCcc-hhh-------ccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000 000000 000 00000000000 000111122346889999999999999999999864
No 298
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5e-33 Score=308.90 Aligned_cols=282 Identities=20% Similarity=0.211 Sum_probs=202.9
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
+.++|.+.+.||+|+||.||+|+...+++.||||.++.. .......+.+|+.+++.++|+||+++++++.........
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 356799999999999999999999889999999998643 223345678899999999999999999986543222334
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+. ++|.+++. ....+++..+..++.||+.||.||| +.+++||||||+||+++.++.+|
T Consensus 83 ~~~lv~e~~~-~~L~~~~~----------~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~k 148 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIR----------SSQTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLK 148 (337)
T ss_pred cEEEEEeCCC-CCHHHHHh----------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEE
Confidence 5899999995 68988873 2456899999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+++...... .......++..|+|||.+.. ..++.++||||||+++|+|++|+.||...... .....+...
T Consensus 149 L~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~ 224 (337)
T cd07858 149 ICDFGLARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV--HQLKLITEL 224 (337)
T ss_pred ECcCccccccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHH
Confidence 99999998654322 11223457889999998765 46889999999999999999999999653211 111111111
Q ss_pred C----chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 395 L----PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 395 ~----~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
. .+.+..+.+..... ........+.... ......+...+.+++.+||+.+|++|||+.|+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 225 LGSPSEEDLGFIRNEKARR------YIRSLPYTPRQSF-ARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hCCCChHHhhhcCchhhhH------HHHhcCcccccCH-HHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 1 11111111111100 0011101111100 01111234568899999999999999999999876
No 299
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=6e-33 Score=307.82 Aligned_cols=281 Identities=22% Similarity=0.294 Sum_probs=199.9
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~ 234 (873)
..++|++.+.||+|+||.||+|.+..+++.||||.+... .......+.+|+.+++++ +|+||+++++++.. .+.
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~---~~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA---END 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc---CCC
Confidence 356789999999999999999999888999999988532 223345677899999999 99999999998642 234
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||++ ++|.+++.. ..+++..++.++.||+.||+||| +.+|+|+||||+||+++.++.+
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~ 146 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRA-----------NILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRV 146 (337)
T ss_pred ceEEEEecccc-cCHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcE
Confidence 56899999997 599888742 26788899999999999999999 8999999999999999999999
Q ss_pred EEecccccccccccccc---ccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHH
Q 002857 315 CVADFGIARFLEATNEQ---TSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~---~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~ 390 (873)
||+|||+++........ .......++..|+|||++.+ ..++.++||||||+++|||+||+.||........ ....
T Consensus 147 kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~ 225 (337)
T cd07852 147 KLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKI 225 (337)
T ss_pred EEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHH
Confidence 99999999866443221 12223458899999998765 4578899999999999999999999965322111 1111
Q ss_pred Hhh--cCch-hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 391 VQS--ALPE-RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 391 ~~~--~~~~-~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
... .... .+..+... +... ....+....... ...........+.+++.+||+.+|++|||+.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 226 IEVIGPPSAEDIESIKSP-FAAT-----MLDSLPSRPRKP-LDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHhCCCCHHHHHHHHhh-hHHH-----hhhhcccccccc-hhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 100 0000 11111000 0000 000000000000 001111124468899999999999999999999864
No 300
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2.2e-33 Score=297.96 Aligned_cols=247 Identities=23% Similarity=0.290 Sum_probs=197.2
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
+|++.+.||.|+||.||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++.+ ..+...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSF-----QDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhh-----cCCCeE
Confidence 58889999999999999999988899999999974322 3457899999999999999999999884 556789
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++|+||+.+++|.+++.. ...+++..+..|+.||++||.||| ..+++|+||+|+||++++++.++|+
T Consensus 76 ~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~ 142 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQ----------KVKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHIT 142 (258)
T ss_pred EEEEeCCCCCCHHHHHHh----------cCCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEe
Confidence 999999999999999842 256889999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
|||++....... ......++..|+|||++.+..++.++||||||+++|+|++|+.||....... ...
T Consensus 143 d~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~------- 209 (258)
T cd05578 143 DFNIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI---RDQ------- 209 (258)
T ss_pred ecccccccCCCc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH---HHH-------
Confidence 999998654322 2223458889999999988889999999999999999999999987532210 000
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCH--HHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKI--NDV 461 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm--~EV 461 (873)
+...... .. ...| ......+.+++.+||+.+|.+||++ +|+
T Consensus 210 -~~~~~~~---~~----------~~~~---------~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l 252 (258)
T cd05578 210 -IRAKQET---AD----------VLYP---------ATWSTEAIDAINKLLERDPQKRLGDNLKDL 252 (258)
T ss_pred -HHHHhcc---cc----------ccCc---------ccCcHHHHHHHHHHccCChhHcCCccHHHH
Confidence 0000000 00 0000 0112357889999999999999999 554
No 301
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=8.4e-33 Score=297.49 Aligned_cols=247 Identities=25% Similarity=0.347 Sum_probs=196.0
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
|+..+.||.|+||.||+|.+..++..||||++.... ....+.+.+|+.++++++|+||+++++++ ..+...++|
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv 80 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKDTKLWII 80 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEE-----EeCCeEEEE
Confidence 667789999999999999988889999999986432 23346788999999999999999999986 456678999
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccc
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFG 320 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFG 320 (873)
|||+++++|.+++. ...+++..+..++.|++.||.||| ..+++|+||+|+||+++.++.++|+|||
T Consensus 81 ~e~~~~~~l~~~i~-----------~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg 146 (277)
T cd06641 81 MEYLGGGSALDLLE-----------PGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFG 146 (277)
T ss_pred EEeCCCCcHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecc
Confidence 99999999999983 235789999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHH
Q 002857 321 IARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVE 400 (873)
Q Consensus 321 la~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~ 400 (873)
++........ ......++..|+|||++.+..++.++||||||+++|+|++|..||....... . .
T Consensus 147 ~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~------------~ 210 (277)
T cd06641 147 VAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK--V------------L 210 (277)
T ss_pred cceecccchh--hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH--H------------H
Confidence 9876543221 1122357889999999988889999999999999999999999986421110 0 0
Q ss_pred HHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 401 EIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 401 elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
..+.. ... +.. .......+.+++.+||+.+|++||++.+++..
T Consensus 211 ~~~~~---~~~------------~~~------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 211 FLIPK---NNP------------PTL------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHhc---CCC------------CCC------CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000 000 000 00112347789999999999999999999884
No 302
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.9e-32 Score=294.34 Aligned_cols=277 Identities=19% Similarity=0.232 Sum_probs=197.0
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhh---hhccceeeeeeeecccccCCce
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNI---IHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L---~HpNIV~llg~c~~~~~~~~~~ 236 (873)
|++.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.+++++ +|+||+++++++..........
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 5678999999999999999988899999999874322 2234577788887776 5999999999976543323335
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+++|||+. ++|.+++.. .....+++..++.++.||+.||+||| +.+++|+||+|+||+++.++.+||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~--------~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l 148 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSK--------CPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKI 148 (287)
T ss_pred eEEEehhcc-cCHHHHHHH--------ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEE
Confidence 899999997 489888743 12235899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||++..+..... .....++..|+|||++.+..++.++||||||+++|||++|+.||...... ..+..+......
T Consensus 149 ~dfg~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~ 224 (287)
T cd07838 149 ADFGLARIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVIGL 224 (287)
T ss_pred eccCcceeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHcCC
Confidence 99999987643321 12234788999999999999999999999999999999999998753221 111111111100
Q ss_pred hhHHHH-hhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 ERVEEI-VDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 ~~l~el-id~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
...... ....... ..+ .............+....+.+++.+||+.||++||++.|++.
T Consensus 225 ~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 225 PSEEEWPRNVSLPR--------SSF-PSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CChHhcCCCcccch--------hhc-ccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000000 0000000 000 000000011112233456789999999999999999999874
No 303
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=6.5e-33 Score=303.29 Aligned_cols=248 Identities=24% Similarity=0.307 Sum_probs=193.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.+.|+..+.||+|+||.||+|+...+++.||+|.+..... ...+.+.+|+++++.++||||++++++|. ...
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-----~~~ 88 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL-----REH 88 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE-----eCC
Confidence 4568889999999999999999988899999999864322 22356889999999999999999999963 456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+. |+|.+++.. ....+++..+..++.||+.||.||| +.+|+|+||+|+||++++++.+|
T Consensus 89 ~~~lv~e~~~-g~l~~~~~~---------~~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~k 155 (307)
T cd06607 89 TAWLVMEYCL-GSASDILEV---------HKKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVK 155 (307)
T ss_pred eEEEEHHhhC-CCHHHHHHH---------cccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEE
Confidence 7899999996 577777632 2345899999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccC---CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM---GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
|+|||++...... ....++..|+|||++. ...++.++||||||+++|||+||+.||....... .
T Consensus 156 L~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~--~----- 222 (307)
T cd06607 156 LADFGSASLVSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--A----- 222 (307)
T ss_pred EeecCcceecCCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH--H-----
Confidence 9999998764322 1235788999999874 3568899999999999999999999986521110 0
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
...+.. .. .+... .......+.+++.+||+.+|++||++.+|+..
T Consensus 223 ------~~~~~~----~~------------~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 223 ------LYHIAQ----ND------------SPTLS-----SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred ------HHHHhc----CC------------CCCCC-----chhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000 00 00000 00123357889999999999999999999864
No 304
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=6.3e-33 Score=302.25 Aligned_cols=264 Identities=20% Similarity=0.193 Sum_probs=184.7
Q ss_pred hcCCCcceeecccCceEEEEEEEcCC---CcEEEEEEeeccCCcch-----------hHHHHHHHHHHhhhhccceeeee
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEG---APAVAIKVFNFLHHDAS-----------KSFTVECEVMRNIIHRKIIKVVT 224 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~---g~~VAVK~l~~~~~~~~-----------~~f~~Ei~iL~~L~HpNIV~llg 224 (873)
.++|.+.++||+|+||.||+|.+..+ +..+|+|+......... .....+...+..+.|+||+++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 36799999999999999999998776 66778886543222110 01122333455568999999998
Q ss_pred eeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCC
Q 002857 225 ACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPS 304 (873)
Q Consensus 225 ~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKps 304 (873)
.+.... ......+++++++.. ++.+.+.. ....++..++.|+.|++.||+||| +.+|+||||||+
T Consensus 91 ~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~----------~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~ 155 (294)
T PHA02882 91 CGSFKR-CRMYYRFILLEKLVE-NTKEIFKR----------IKCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPE 155 (294)
T ss_pred eeeEec-CCceEEEEEEehhcc-CHHHHHHh----------hccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHH
Confidence 753211 112245778887743 66665531 223467788999999999999999 899999999999
Q ss_pred CeeeCCCCCeEEecccccccccccccc-----ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 305 NILLNDEMTACVADFGIARFLEATNEQ-----TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 305 NILLd~~~~vKLsDFGla~~~~~~~~~-----~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|||++.++.++|+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 156 Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~ 235 (294)
T PHA02882 156 NIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKG 235 (294)
T ss_pred HEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCc
Confidence 999999999999999999866432211 111224599999999999999999999999999999999999999976
Q ss_pred ccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHH
Q 002857 380 MFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIN 459 (873)
Q Consensus 380 ~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~ 459 (873)
...... ..... ..+++........ ....+...+.+++..|++.+|++||++.
T Consensus 236 ~~~~~~-~~~~~-------~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~rp~~~ 287 (294)
T PHA02882 236 FGHNGN-LIHAA-------KCDFIKRLHEGKI--------------------KIKNANKFIYDFIECVTKLSYEEKPDYD 287 (294)
T ss_pred cccchH-HHHHh-------HHHHHHHhhhhhh--------------------ccCCCCHHHHHHHHHHHhCCCCCCCCHH
Confidence 422111 11000 0111111110000 0011234588999999999999999999
Q ss_pred HHHHHH
Q 002857 460 DVELGL 465 (873)
Q Consensus 460 EVl~~L 465 (873)
+|++.|
T Consensus 288 ~l~~~~ 293 (294)
T PHA02882 288 ALIKIF 293 (294)
T ss_pred HHHHhh
Confidence 998876
No 305
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=7.1e-33 Score=300.08 Aligned_cols=249 Identities=20% Similarity=0.252 Sum_probs=196.2
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
.|...+.||+|++|.||++....+++.||+|+++.......+.+.+|+.+++.++|+||+++++++ ...+..++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~-----~~~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSY-----LVGDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEE-----EcCCeEEEE
Confidence 345568999999999999998888999999998755555556789999999999999999999985 345678999
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccc
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFG 320 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFG 320 (873)
+||+++++|.+++.. ..+++..+..++.|++.||+||| +.+|+||||+|+||+++.++.++|+|||
T Consensus 95 ~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g 160 (285)
T cd06648 95 MEFLEGGALTDIVTH-----------TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFG 160 (285)
T ss_pred EeccCCCCHHHHHHh-----------CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccc
Confidence 999999999999832 45788899999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHH
Q 002857 321 IARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVE 400 (873)
Q Consensus 321 la~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~ 400 (873)
++........ ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...... ... .
T Consensus 161 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--~~~-----------~ 225 (285)
T cd06648 161 FCAQVSKEVP--RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--QAM-----------K 225 (285)
T ss_pred cchhhccCCc--ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--HHH-----------H
Confidence 8875533221 122345889999999998888999999999999999999999998542110 000 0
Q ss_pred HHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 401 EIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 401 elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+. ... .+..... ......+.+++.+||+.+|++|||+.++++
T Consensus 226 ~~~-~~~---------------~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 226 RIR-DNL---------------PPKLKNL----HKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHH-hcC---------------CCCCccc----ccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 000 000 0000000 001235889999999999999999998875
No 306
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=7.2e-33 Score=299.09 Aligned_cols=255 Identities=25% Similarity=0.283 Sum_probs=201.8
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
..++.|+..+.||+|++|.||+|.+..++..||+|++..... ..+.+.+|++++++++|+||+++++.+. ....
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 89 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYL-----VGDE 89 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEE-----ECCE
Confidence 456778889999999999999999987889999999975444 4567899999999999999999999863 3567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++|+||+++++|.+++.. ....+++..++.++.|++.||+||| +.+|+|+||+|+||+++.++.++|
T Consensus 90 ~~lv~e~~~~~~L~~~l~~---------~~~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l 157 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQ---------NFVRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKL 157 (286)
T ss_pred EEEEEeccCCCcHHHHHHH---------hccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEE
Confidence 9999999999999999953 1137899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||++........ ......++..|+|||++.+..++.++||||||+++|+|++|+.||....... ..
T Consensus 158 ~d~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-~~--------- 225 (286)
T cd06614 158 ADFGFAAQLTKEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-AL--------- 225 (286)
T ss_pred Cccchhhhhccchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-HH---------
Confidence 99999875543221 1122347889999999988889999999999999999999999986421110 00
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
..+..... +.... .......+.+++.+||+.+|.+|||+.+|++.
T Consensus 226 ---~~~~~~~~----------------~~~~~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 226 ---FLITTKGI----------------PPLKN----PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred ---HHHHhcCC----------------CCCcc----hhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 00000000 00000 01123357889999999999999999999763
No 307
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=6.5e-33 Score=301.14 Aligned_cols=209 Identities=25% Similarity=0.321 Sum_probs=170.9
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeeccc----
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVD---- 230 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~---- 230 (873)
.+.++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|++++++++||||+++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35678999999999999999999998889999999987433 223356788999999999999999999874321
Q ss_pred -ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 231 -YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 231 -~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
.......++|+||+++ +|.+++.. ....+++..++.|+.||+.||+||| +.+|+|+||||+||+++
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~ 150 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLES---------GLVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLN 150 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhc---------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEC
Confidence 1123478999999976 77777632 2346899999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 310 DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 310 ~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+++.+||+|||++........ .......++..|+|||.+.+. .++.++|||||||++|||++|+.||..
T Consensus 151 ~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~ 220 (302)
T cd07864 151 NKGQIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQA 220 (302)
T ss_pred CCCcEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999986644322 111223467889999987653 578899999999999999999999965
No 308
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.1e-32 Score=296.48 Aligned_cols=273 Identities=21% Similarity=0.293 Sum_probs=198.0
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
+|++.+.||.|++|.||+|++..+++.||||+++.... .....+.+|++++++++|+||+++++++ ...+..+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVI-----HTENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeE-----eeCCcEEE
Confidence 58889999999999999999988899999999875433 2346778899999999999999999996 34567899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++ +|.+++.. ......+++..+..++.||+.||+||| +.+|+||||||+||++++++.++|+||
T Consensus 76 v~e~~~~-~l~~~~~~-------~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~ 144 (284)
T cd07836 76 VFEYMDK-DLKKYMDT-------HGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADF 144 (284)
T ss_pred EEecCCc-cHHHHHHh-------cCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeec
Confidence 9999985 88888743 112346899999999999999999999 889999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh---cC
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS---AL 395 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~---~~ 395 (873)
|+++....... ......++..|++||++.+. .++.++||||||+++|||++|+.||....... .+...... ..
T Consensus 145 g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~ 221 (284)
T cd07836 145 GLARAFGIPVN--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPT 221 (284)
T ss_pred chhhhhcCCcc--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCC
Confidence 99975533211 11223468899999987664 56889999999999999999999997632211 11111100 00
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCc--hhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSS--TQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~--~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
...+..+.+. .... ...+... ............+.+++.+|++.+|.+||++.||++
T Consensus 222 ~~~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 222 ESTWPGISQL---PEYK--------PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hhhHHHHhcC---chhc--------ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0011111100 0000 0000000 001111122346789999999999999999999874
No 309
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=7.6e-33 Score=299.94 Aligned_cols=203 Identities=23% Similarity=0.271 Sum_probs=169.3
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|++.+.||+|+||.||+|.+..+++.+|+|.++.... .....+.+|+.++.+++||||+++++++.. ......
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~---~~~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVG---SNLDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEe---cCCCcE
Confidence 478889999999999999999988899999999874332 223457789999999999999999998642 223679
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+. ++|.+++.. ....+++..++.++.||+.||+||| +.+|+|+||||+||+++.++.+||+
T Consensus 82 ~lv~e~~~-~~L~~~~~~---------~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~ 148 (293)
T cd07843 82 YMVMEYVE-HDLKSLMET---------MKQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKIC 148 (293)
T ss_pred EEEehhcC-cCHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEe
Confidence 99999997 499988842 2236899999999999999999999 8899999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
|||+++....... ......++..|+|||++.+. .++.++||||||+++|||++|..||...
T Consensus 149 d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~ 210 (293)
T cd07843 149 DFGLAREYGSPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGK 210 (293)
T ss_pred ecCceeeccCCcc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999986644321 11233478899999988765 4689999999999999999999999753
No 310
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-34 Score=321.88 Aligned_cols=252 Identities=24% Similarity=0.327 Sum_probs=201.6
Q ss_pred CcceeecccCceEEEEEEEcCC-C--cEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 163 SSENLIGAGNFASVYKGILFEG-A--PAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~-g--~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
...++||+|.||.|++|.|..- | -.||||.++..... ...+|++|+.+|.+|+|+|+|+|||+.. +....
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl------~qp~m 186 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVL------DQPAM 186 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeec------cchhh
Confidence 4458999999999999999643 3 35899999865444 5689999999999999999999999942 35578
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+|||.++.|||.+.|+. .....|-....-.++.|||.||.||. .+++|||||..+||||-..-.+||+|
T Consensus 187 MV~ELaplGSLldrLrk--------a~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~D 255 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRK--------AKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICD 255 (1039)
T ss_pred HHhhhcccchHHHHHhh--------ccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeec
Confidence 99999999999999964 24456777788899999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccc-ccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCc
Q 002857 319 FGIARFLEATNEQTS-SIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 319 FGla~~~~~~~~~~~-~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
||+.+.+........ .....-.+.|.|||.+....++.+||||+|||+||||+| |..||.+....
T Consensus 256 FGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~------------- 322 (1039)
T KOG0199|consen 256 FGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI------------- 322 (1039)
T ss_pred ccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH-------------
Confidence 999998765543322 222335778999999999999999999999999999999 88888663211
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
.+.+.+|. ++ .+ .....|.+.++++++.||..+|++|||+..|.+.+-
T Consensus 323 -qIL~~iD~---~e---------rL---------pRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 323 -QILKNIDA---GE---------RL---------PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred -HHHHhccc---cc---------cC---------CCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 11222220 10 00 011246778999999999999999999999985543
No 311
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.3e-32 Score=301.05 Aligned_cols=203 Identities=25% Similarity=0.314 Sum_probs=168.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--chhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|++.+.||+|+||.||+|.+..+++.||+|+++..... ....+.+|+.++++++|+||+++++++.. ...+.
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVG---KHLDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEec---CCCCe
Confidence 46799999999999999999999888999999998743322 23456789999999999999999998642 22356
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+.+ +|.+++.. ....+++.+++.++.||+.||+||| +.+++||||||+||++++++.+||
T Consensus 83 ~~lv~e~~~~-~l~~~l~~---------~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL 149 (309)
T cd07845 83 IFLVMEYCEQ-DLASLLDN---------MPTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKI 149 (309)
T ss_pred EEEEEecCCC-CHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEE
Confidence 8999999964 88888742 2356899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|||++........ ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||..
T Consensus 150 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~ 211 (309)
T cd07845 150 ADFGLARTYGLPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPG 211 (309)
T ss_pred CccceeeecCCccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999986643221 1122235788999998866 4578999999999999999999999975
No 312
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9e-35 Score=296.09 Aligned_cols=251 Identities=22% Similarity=0.331 Sum_probs=210.1
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeec--cCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNF--LHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~--~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
+++|++.+.||+|.|+.||+..+..+|+.+|+|+++. ......+++.+|+.|-+.|+||||++|...+ .....
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-----~~~~~ 84 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESF 84 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh-----cccce
Confidence 4678888999999999999999999999999999863 3344668899999999999999999999884 56778
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC---CCC
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND---EMT 313 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~---~~~ 313 (873)
.+||+|+|.|++|..-|- ....+++...-..+.||+++|.|.| .++|||||+||+|+||-. .--
T Consensus 85 ~ylvFe~m~G~dl~~eIV----------~R~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~ 151 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIV----------AREFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAA 151 (355)
T ss_pred eEEEEecccchHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCc
Confidence 999999999999976552 1245677788889999999999999 899999999999999953 346
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccc---------
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDN--------- 384 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~--------- 384 (873)
+||+|||+|..+. ......+.+||++|||||++...+|+..+|||+-|||||-|+.|..||.+.....
T Consensus 152 vKL~~FGvAi~l~---~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~ 228 (355)
T KOG0033|consen 152 VKLADFGLAIEVN---DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGA 228 (355)
T ss_pred eeecccceEEEeC---CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccc
Confidence 8999999999776 3344556789999999999999999999999999999999999999997732211
Q ss_pred hhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhH
Q 002857 385 LNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQR 430 (873)
Q Consensus 385 ~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~ 430 (873)
.++..-.|..+.+..++++..|+.-++.+|.+..+.++|||.....
T Consensus 229 yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 229 YDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRE 274 (355)
T ss_pred cCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchH
Confidence 1222223556667889999999999999999999999999976544
No 313
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1e-32 Score=290.09 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=200.8
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|++.+.||.|+||.||++.+..++..||+|++..... ...+.+.+|++++++++|+|++++++.+ ......+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~-----~~~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESF-----EEKGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEE-----ecCCEEE
Confidence 57888999999999999999988899999999875433 4456789999999999999999999985 3457899
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+|+||+++++|.+++... ......+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|
T Consensus 76 lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d 146 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQ------KKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGD 146 (258)
T ss_pred EEEEecCCCcHHHHHHHh------hccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECC
Confidence 999999999999998531 112467899999999999999999999 88999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||++....... .......++..|+|||.+.+..++.++||||||+++|+|++|+.||......
T Consensus 147 ~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------------- 209 (258)
T cd08215 147 FGISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL--------------- 209 (258)
T ss_pred ccceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH---------------
Confidence 99998664432 1222345888999999998888999999999999999999999998653111
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
++.......... ..+. .....+.+++.+||+.+|++|||+.||++
T Consensus 210 --~~~~~~~~~~~~---------~~~~---------~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 210 --ELALKILKGQYP---------PIPS---------QYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --HHHHHHhcCCCC---------CCCC---------CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 011110000000 0000 11235788999999999999999999875
No 314
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-32 Score=310.26 Aligned_cols=252 Identities=23% Similarity=0.322 Sum_probs=205.9
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc---chhHHHHHHHHHHhhh-hccceeeeeeeecccccC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD---ASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~---~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~ 233 (873)
....|++.+.||+|.||.||+++.+.+|+.+|+|++.+.... ....+.+|+++|+++. |||||.+.+.+ +.
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~-----e~ 107 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF-----ED 107 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE-----Ec
Confidence 345688889999999999999999999999999999754433 3368999999999998 99999999995 56
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC--
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE-- 311 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~-- 311 (873)
....++|||++.||.|.+.|.. . .+++.....++.||+.+++||| +.+|+||||||+|+|+...
T Consensus 108 ~~~~~lvmEL~~GGeLfd~i~~--------~---~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~ 173 (382)
T KOG0032|consen 108 PDSVYLVMELCEGGELFDRIVK--------K---HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDE 173 (382)
T ss_pred CCeEEEEEEecCCchHHHHHHH--------c---cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccC
Confidence 6789999999999999999953 1 3999999999999999999999 8999999999999999633
Q ss_pred --CCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHH
Q 002857 312 --MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQN 389 (873)
Q Consensus 312 --~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~ 389 (873)
+.+|++|||++..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||..........
T Consensus 174 ~~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-- 248 (382)
T KOG0032|consen 174 GSGRIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-- 248 (382)
T ss_pred CCCcEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH--
Confidence 5799999999998755 233445789999999999999999999999999999999999999998743322111
Q ss_pred HHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 390 WVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 390 ~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+....+ .+...+|... ...+.+++..++..||.+|+|+.++++
T Consensus 249 -----------~i~~~~~-----------~f~~~~w~~i--------s~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 249 -----------AILRGDF-----------DFTSEPWDDI--------SESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred -----------HHHcCCC-----------CCCCCCcccc--------CHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 1111111 1122233222 234678999999999999999999887
No 315
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.5e-32 Score=297.78 Aligned_cols=201 Identities=21% Similarity=0.296 Sum_probs=165.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|++.+.||+|++|.||+|.+..+++.||+|.+..... ...+.+.+|++++++++|+||+++++++ ......
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV-----HSEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEE-----ecCCeE
Confidence 578999999999999999999988899999999864322 2335788999999999999999999996 456689
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC-CCCeEE
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND-EMTACV 316 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~-~~~vKL 316 (873)
++||||++ ++|.+++.. .....+++.....++.||+.||+||| +.+|+|+||+|+||+++. ++.+||
T Consensus 77 ~lv~e~~~-~~l~~~~~~--------~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl 144 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDS--------SPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKL 144 (294)
T ss_pred EEEEeccc-ccHHHHHHh--------CCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEE
Confidence 99999996 588877732 22334577888899999999999999 899999999999999985 567999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|||++....... .......++..|+|||++.+. .++.++||||||+++|+|+||+.||..
T Consensus 145 ~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~ 206 (294)
T PLN00009 145 ADFGLARAFGIPV--RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPG 206 (294)
T ss_pred cccccccccCCCc--cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999997653321 111223568899999988664 578999999999999999999999965
No 316
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=4.3e-33 Score=300.85 Aligned_cols=258 Identities=24% Similarity=0.243 Sum_probs=191.2
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhh-hccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|...+.||+|+||.||++.+..+++.||+|.+.... ......+.+|+.++.++. |+||+++++++ ..+...+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~-----~~~~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGAL-----FREGDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEE-----ecCCcEE
Confidence 4556789999999999999999899999999986433 234467889999999996 99999999985 3456788
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
++|||+.. +|.++.... .......+++..+..++.+++.||+|||+ ..+|+||||||+||+++.++.+||+|
T Consensus 80 ~~~e~~~~-~l~~l~~~~-----~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~d 151 (288)
T cd06616 80 ICMELMDI-SLDKFYKYV-----YEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCD 151 (288)
T ss_pred EEEecccC-CHHHHHHHH-----HHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEee
Confidence 99999864 665543210 01223568999999999999999999993 35999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCC---CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH---ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~---~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
||+++.+..... .....++..|+|||++.+. .++.++||||||+++|||++|+.||..... ...
T Consensus 152 fg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~------ 218 (288)
T cd06616 152 FGISGQLVDSIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VFD------ 218 (288)
T ss_pred cchhHHhccCCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----HHH------
Confidence 999976543221 1223578899999998776 689999999999999999999999864210 000
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
.+..+.. ... +.... .........+.+++.+||+.+|++|||+.+|+..
T Consensus 219 --~~~~~~~----~~~------------~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 219 --QLTQVVK----GDP------------PILSN--SEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred --HHhhhcC----CCC------------CcCCC--cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011000 000 00000 0001123458899999999999999999998763
No 317
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2e-32 Score=293.57 Aligned_cols=272 Identities=21% Similarity=0.208 Sum_probs=199.1
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
|++.+.||+|++|.||+|....+++.+|+|.++..... ....+.+|++++++++|+||+++++++ ..+...++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVF-----RHKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhh-----ccCCCEEE
Confidence 56778999999999999999888999999998744322 346788999999999999999999985 44577899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++ +|.+++.. ....+++..++.++.||+.||.||| ..+|+|+||||+||+++.++.+||+||
T Consensus 76 v~e~~~~-~l~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df 142 (283)
T cd05118 76 VFEFMDT-DLYKLIKD---------RQRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADF 142 (283)
T ss_pred EEeccCC-CHHHHHHh---------hcccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeee
Confidence 9999975 88888742 2357899999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch-
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE- 397 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~- 397 (873)
|.+....... .......++..|+|||.+.+. .++.++||||||+++|+|+||+.||....... ........+..
T Consensus 143 ~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~--~~~~~~~~~~~~ 218 (283)
T cd05118 143 GLARSFGSPV--RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID--QLFKIFRTLGTP 218 (283)
T ss_pred eeeEecCCCc--ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHcCCC
Confidence 9998664432 112224578889999998876 78999999999999999999999986532211 11111111000
Q ss_pred ---hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 398 ---RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 398 ---~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+..+.+...... .......... ..........++.+++..||+.+|.+||++.+++.
T Consensus 219 ~~~~~~~~~~~~~~~~------~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 219 DPEVWPKFTSLARNYK------FSFPKKAGMP--LPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred chHhcccchhhhhhhh------hhhccccccC--HHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0011100000000 0000000000 01122234567899999999999999999999875
No 318
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.3e-32 Score=304.38 Aligned_cols=278 Identities=19% Similarity=0.228 Sum_probs=195.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccc-cCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY-QGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~-~~~~ 235 (873)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++|+||+++++++..... ....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999998889999999986432 2223568899999999999999999998743221 1224
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++|+||+.. +|..++ ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+|
T Consensus 94 ~~~lv~e~~~~-~l~~~~------------~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~k 157 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM------------GHPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELK 157 (342)
T ss_pred eEEEEeccccc-CHHHHH------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEE
Confidence 56999999964 676654 134788899999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh--
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ-- 392 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~-- 392 (873)
|+|||+++..... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .+...+.
T Consensus 158 L~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~~ 231 (342)
T cd07879 158 ILDFGLARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVT 231 (342)
T ss_pred EeeCCCCcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhc
Confidence 9999999754321 123457889999999876 468899999999999999999999997532111 1111110
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
......+.+.++....... .......+. .............+.+++.+||+.||++||++.||+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 232 GVPGPEFVQKLEDKAAKSY-----IKSLPKYPR-KDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred CCCCHHHHHHhcccchHHH-----HhhcCCccc-chHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0001111111111100000 000000000 00000001112357899999999999999999999753
No 319
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2e-32 Score=292.28 Aligned_cols=204 Identities=24% Similarity=0.368 Sum_probs=171.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc-----CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL-----HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~-----~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.+|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|++++++++|+||+++++++.. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~---~~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRD---PEE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEc---CCC
Confidence 4788999999999999999999888999999987532 12234578899999999999999999998632 224
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++|+||+++++|.+++.. ...+++...+.++.||+.||.||| +.+|+|+||||+||+++.++.+
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~----------~~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~ 145 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKA----------YGALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNV 145 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCE
Confidence 568899999999999999842 245788899999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccc-cccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 315 CVADFGIARFLEATNE-QTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 315 KLsDFGla~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|+|||+++....... ........++..|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 211 (264)
T cd06653 146 KLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAE 211 (264)
T ss_pred EECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence 9999999986532111 1112234588999999999988899999999999999999999999864
No 320
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=4.4e-33 Score=294.58 Aligned_cols=247 Identities=23% Similarity=0.346 Sum_probs=193.0
Q ss_pred ecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeec
Q 002857 168 IGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFM 244 (873)
Q Consensus 168 LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~ 244 (873)
||.|+||.||++++..+++.+|+|++..... ...+.+.+|++++++++|+||+++++.+ ..+...++||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEecC
Confidence 6899999999999988899999999864433 3456789999999999999999999874 4567789999999
Q ss_pred CCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 245 PNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 245 ~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
++++|.+++.. ...+++..++.++.||+.||+||| ..+++|+||+|+||++++++.++|+|||++..
T Consensus 76 ~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~ 142 (265)
T cd05579 76 PGGDLASLLEN----------VGSLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKV 142 (265)
T ss_pred CCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchh
Confidence 99999999842 236899999999999999999999 89999999999999999999999999999875
Q ss_pred cccccc------cccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 325 LEATNE------QTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 325 ~~~~~~------~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
...... ........++..|+|||.......+.++||||||+++|||++|+.||.......
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-------------- 208 (265)
T cd05579 143 GLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE-------------- 208 (265)
T ss_pred cccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--------------
Confidence 433211 112223457889999999988889999999999999999999999986532110
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
+.+....... ++.... .....+.+++.+||+.+|++|||+.+|.+.|+
T Consensus 209 ---~~~~~~~~~~------------~~~~~~-----~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 209 ---IFQNILNGKI------------EWPEDV-----EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred ---HHHHHhcCCc------------CCCccc-----cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0110000000 000000 01235788999999999999999977666554
No 321
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.6e-32 Score=296.71 Aligned_cols=243 Identities=21% Similarity=0.259 Sum_probs=182.6
Q ss_pred eecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhh---hhccceeeeeeeecccccCCceEEEE
Q 002857 167 LIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNI---IHRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 167 ~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L---~HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
.||+|+||.||++....+++.+|+|.+..... .....+.+|..+++.+ +|+||+.+++++ ..++..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAF-----HTPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEE-----ecCCeEEEE
Confidence 48999999999999988899999999864322 1223345555444443 699999999885 345678999
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccc
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFG 320 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFG 320 (873)
|||+++|+|.+++.. ...+++..+..|+.|++.||+||| +.+|+|+||||+|||+++++.++|+|||
T Consensus 76 ~e~~~~~~L~~~i~~----------~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg 142 (279)
T cd05633 76 LDLMNGGDLHYHLSQ----------HGVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLG 142 (279)
T ss_pred EecCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCC
Confidence 999999999998842 346899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 321 IARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 321 la~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
++....... .....|+..|+|||.+.+ ..++.++||||||+++|||++|..||......... .+
T Consensus 143 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-----------~~ 207 (279)
T cd05633 143 LACDFSKKK----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-----------EI 207 (279)
T ss_pred cceeccccC----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-----------HH
Confidence 987543221 122458999999998864 56889999999999999999999999653221100 00
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-----CHHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-----KINDVELG 464 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-----Tm~EVl~~ 464 (873)
...... .... .+ ......+.+++.+||+.||++|| |++|+++.
T Consensus 208 ~~~~~~-~~~~------------~~---------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 208 DRMTLT-VNVE------------LP---------DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHHhhc-CCcC------------Cc---------cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 000000 0000 00 01123577899999999999999 58887653
No 322
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.9e-32 Score=288.19 Aligned_cols=248 Identities=28% Similarity=0.392 Sum_probs=198.6
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|++.+.||+|++|.||+|+...+++.||+|.+..... .....+.+|++++++++|+|++++++++ ......+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSI-----ETSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEE-----EeCCEEE
Confidence 47888999999999999999988889999999875543 3456799999999999999999999985 3456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||+|+||+++.++.++|+|
T Consensus 76 ~v~e~~~~~~L~~~~~~----------~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d 142 (254)
T cd06627 76 IILEYAENGSLRQIIKK----------FGPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLAD 142 (254)
T ss_pred EEEecCCCCcHHHHHHh----------ccCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEec
Confidence 99999999999999842 356899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||++......... .....++..|+|||...+...+.++||||||+++|+|++|+.||...... ...
T Consensus 143 ~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~----~~~-------- 208 (254)
T cd06627 143 FGVATKLNDVSKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM----AAL-------- 208 (254)
T ss_pred cccceecCCCccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH----HHH--------
Confidence 9999876543321 12345788999999988888899999999999999999999998652110 000
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..... . .++... ......+.+++.+||+.+|++|||+.+++.
T Consensus 209 -~~~~~----~------------~~~~~~------~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 209 -FRIVQ----D------------DHPPLP------EGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -HHHhc----c------------CCCCCC------CCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 00000 0 000000 001234778999999999999999999864
No 323
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-33 Score=291.16 Aligned_cols=253 Identities=23% Similarity=0.377 Sum_probs=201.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc----c----hhHHHHHHHHHHhh-hhccceeeeeeeecc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD----A----SKSFTVECEVMRNI-IHRKIIKVVTACSRV 229 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~----~----~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~ 229 (873)
-+.|...+.||.|..+.|-+..++.++..+|+|++...... . .+.-.+|+.||+++ .||+|+++.++
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~---- 91 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV---- 91 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee----
Confidence 35678889999999999999999999999999998632211 1 23456799999998 69999999999
Q ss_pred cccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
++.+.+.++|+|.|+.|.|.++|. ....+++.....|++|+..|+.||| ...||||||||+|||+|
T Consensus 92 -yes~sF~FlVFdl~prGELFDyLt----------s~VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILld 157 (411)
T KOG0599|consen 92 -YESDAFVFLVFDLMPRGELFDYLT----------SKVTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLD 157 (411)
T ss_pred -ccCcchhhhhhhhcccchHHHHhh----------hheeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeec
Confidence 477888999999999999999994 4567999999999999999999999 99999999999999999
Q ss_pred CCCCeEEeccccccccccccccccccccccccccCCCcccCC------CCCCcchhhHhHHHHHHHHHhCCCCCCccccc
Q 002857 310 DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG------HETSSYGDVYSFGILLLEMFTGLRPSDDMFKD 383 (873)
Q Consensus 310 ~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~------~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~ 383 (873)
++.++||+|||++..+..+.. .....||++|+|||.+.- ..|+...|+||.|||||.|+.|.+||... .
T Consensus 158 dn~~i~isDFGFa~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR--k 232 (411)
T KOG0599|consen 158 DNMNIKISDFGFACQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR--K 232 (411)
T ss_pred cccceEEeccceeeccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--H
Confidence 999999999999998866543 345679999999998642 36888999999999999999999999541 1
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+.- ++...+.+.+ ++..+.|. +......+++.+||+.||.+|.|++|++.
T Consensus 233 Qml---------------MLR~ImeGky-------qF~speWa--------dis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 233 QML---------------MLRMIMEGKY-------QFRSPEWA--------DISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHH---------------HHHHHHhccc-------ccCCcchh--------hccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 110 1111111111 11111121 12335778999999999999999999885
Q ss_pred H
Q 002857 464 G 464 (873)
Q Consensus 464 ~ 464 (873)
.
T Consensus 283 H 283 (411)
T KOG0599|consen 283 H 283 (411)
T ss_pred C
Confidence 3
No 324
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.3e-32 Score=290.28 Aligned_cols=250 Identities=24% Similarity=0.286 Sum_probs=199.3
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|++.++||+|+||.||+++...+++.+|+|.+.... ......+.+|++++++++|+||+++++++ ......+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAF-----LDGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhh-----ccCCEEE
Confidence 5788999999999999999998889999999987432 23345788899999999999999999885 4457899
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++... ......+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.+||+|
T Consensus 76 ~v~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d 146 (256)
T cd08530 76 IVMEYAPFGDLSKAISKR------KKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGD 146 (256)
T ss_pred EEehhcCCCCHHHHHHHH------HhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEee
Confidence 999999999999998531 122456889999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||+++..... ......++..|+|||.+.+..++.++|+||||+++|||++|+.||...... .+...
T Consensus 147 ~g~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~-------- 212 (256)
T cd08530 147 LGISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYK-------- 212 (256)
T ss_pred ccchhhhccC----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH--------
Confidence 9999876543 112234788999999999989999999999999999999999999653211 00000
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+. ... .+... ......+.+++.+||+.+|++||++.|+++
T Consensus 213 ----~~---~~~------------~~~~~------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 213 ----VQ---RGK------------YPPIP------PIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ----Hh---cCC------------CCCCc------hhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 000 00000 012335789999999999999999999875
No 325
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2e-32 Score=291.22 Aligned_cols=192 Identities=26% Similarity=0.363 Sum_probs=166.6
Q ss_pred ecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeec
Q 002857 168 IGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFM 244 (873)
Q Consensus 168 LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~ 244 (873)
||.|+||.||++++..+++.||+|++.... ....+.+.+|++++++++|+||+++++++ ..+...++||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTF-----KDKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeE-----EcCCccEEEEecC
Confidence 699999999999998889999999986432 23346799999999999999999999985 4566789999999
Q ss_pred CCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 245 PNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 245 ~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
++++|.+++.. ...+++..+..++.||+.||+||| +.+++|+||+|+||+++.++.++|+|||+++.
T Consensus 76 ~~~~L~~~l~~----------~~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~ 142 (262)
T cd05572 76 LGGELWTILRD----------RGLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKK 142 (262)
T ss_pred CCCcHHHHHhh----------cCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccc
Confidence 99999999942 345888999999999999999999 89999999999999999999999999999986
Q ss_pred cccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 325 LEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 325 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
..... ......++..|+|||++.+..++.++||||||+++|+|++|..||...
T Consensus 143 ~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 195 (262)
T cd05572 143 LKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGED 195 (262)
T ss_pred cCccc---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCC
Confidence 64332 122345788999999998888999999999999999999999999753
No 326
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.5e-32 Score=297.08 Aligned_cols=208 Identities=21% Similarity=0.327 Sum_probs=169.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--chhHHHHHHHHHHhhhhccceeeeeeeecccc---cC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--ASKSFTVECEVMRNIIHRKIIKVVTACSRVDY---QG 233 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~---~~ 233 (873)
.++|++.++||+|+||.||+|++..+++.||||++...... ....+.+|++++++++|+||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 57899999999999999999999888999999998643222 23467889999999999999999987643221 12
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
....++||||+.+ +|...+.. ....+++.++..++.||++||+||| +.+|+|+||||+||++++++.
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~---------~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~ 153 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN---------PSVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGI 153 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc---------cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCC
Confidence 3457999999965 67776632 2346899999999999999999999 899999999999999999999
Q ss_pred eEEeccccccccccccccc---------cccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 314 ACVADFGIARFLEATNEQT---------SSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~---------~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+||+|||+++......... ......++..|+|||++.+. .++.++||||||+++|||++|+.||..
T Consensus 154 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~ 229 (311)
T cd07866 154 LKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQG 229 (311)
T ss_pred EEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCC
Confidence 9999999998654322111 11234568889999987654 578999999999999999999999975
No 327
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-35 Score=302.65 Aligned_cols=249 Identities=26% Similarity=0.305 Sum_probs=204.1
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
|.+..+||+|+||.||+|.++..|..||||.+... ....++..|+.+|++.+.+++|+++|.+ .....+++||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSY-----FK~sDLWIVM 107 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSY-----FKHSDLWIVM 107 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhh-----ccCCceEeeh
Confidence 56678999999999999999999999999987533 3567899999999999999999999985 4566799999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
|||..|++.+.++ ..++.|++.++..|+.+.++||+||| ...-||||||+.||||+.+|.+||+|||.
T Consensus 108 EYCGAGSiSDI~R---------~R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGV 175 (502)
T KOG0574|consen 108 EYCGAGSISDIMR---------ARRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGV 175 (502)
T ss_pred hhcCCCcHHHHHH---------HhcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccc
Confidence 9999999999995 35778999999999999999999999 78899999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHH
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEE 401 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~e 401 (873)
|-.+..... ....+.||+.|||||++..-.|..++||||||++..||.-|++||.+...-. .
T Consensus 176 AGQLTDTMA--KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR----------------A 237 (502)
T KOG0574|consen 176 AGQLTDTMA--KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR----------------A 237 (502)
T ss_pred cchhhhhHH--hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc----------------e
Confidence 976644322 2234679999999999999999999999999999999999999997742210 0
Q ss_pred HhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 402 IVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 402 lid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
++ ++.. ..+|.......+ ...+-++++.||-.+|++|-|+.++++.
T Consensus 238 IF--MIPT-----------~PPPTF~KPE~W----S~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 238 IF--MIPT-----------KPPPTFKKPEEW----SSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred eE--eccC-----------CCCCCCCChHhh----hhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 00 0000 111222222222 3458899999999999999999988763
No 328
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.6e-32 Score=301.10 Aligned_cols=285 Identities=20% Similarity=0.223 Sum_probs=202.4
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|++.+.||.|+||.||+|+...+++.||||++.... ....+.+.+|+++++.++|+||+++++++...........+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5788999999999999999998889999999987543 33456799999999999999999999986432212224689
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||++ ++|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++.++|+|
T Consensus 81 lv~e~~~-~~l~~~l~~----------~~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~d 146 (330)
T cd07834 81 IVTELME-TDLHKVIKS----------PQPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICD 146 (330)
T ss_pred EEecchh-hhHHHHHhC----------CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcc
Confidence 9999997 489888842 347899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccc-cccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 319 FGIARFLEATNE-QTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 319 FGla~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
||++........ ........++..|+|||++.+. .++.++||||||+++|+|++|+.||....... ....+.....
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~ 224 (330)
T cd07834 147 FGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID--QLNLIVEVLG 224 (330)
T ss_pred cCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH--HHHHHHHhcC
Confidence 999987644321 0112234578899999999887 78999999999999999999999997643211 1111111110
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
....+........... ........... .............+.+++.+||+.+|++|||+.+++..
T Consensus 225 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 225 TPSEEDLKFITSEKAR--NYLKSLPKKPK-KPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred CCChhHhhhccccchh--hHHhhcccCCc-chhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000000000000000 00000000000 00011111224468899999999999999999999864
No 329
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.6e-32 Score=295.24 Aligned_cols=193 Identities=26% Similarity=0.347 Sum_probs=165.1
Q ss_pred ecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeec
Q 002857 168 IGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFM 244 (873)
Q Consensus 168 LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~ 244 (873)
||+|+||+||++....+++.||+|++.... ......+..|++++++++||||+++++.+ ...+..++||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF-----ETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE-----ecCCeEEEEEecC
Confidence 699999999999998889999999986432 22335678899999999999999999885 4456789999999
Q ss_pred CCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 245 PNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 245 ~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
++++|.+++.. .....+++..++.++.|++.||.||| ..+++||||+|+||+++.++.+||+|||++..
T Consensus 76 ~~~~L~~~l~~--------~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~ 144 (277)
T cd05577 76 NGGDLKYHIYN--------VGEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVE 144 (277)
T ss_pred CCCcHHHHHHH--------cCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhh
Confidence 99999999853 22246899999999999999999999 89999999999999999999999999999976
Q ss_pred cccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 325 LEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 325 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
..... ......++..|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 145 ~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 196 (277)
T cd05577 145 LKGGK---KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQ 196 (277)
T ss_pred hccCC---ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCC
Confidence 54321 12233578899999999888899999999999999999999999965
No 330
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.2e-32 Score=299.62 Aligned_cols=248 Identities=24% Similarity=0.292 Sum_probs=192.4
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
|+..+.||+|+||.||+|++..++..||+|.+..... .....+.+|++++++++|+|++++++++ ..+...+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 101 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCY-----LREHTAW 101 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----eeCCeEE
Confidence 6677899999999999999988899999999864322 2235688899999999999999999986 3456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+. |+|.+++.. ....+++.++..++.||+.||.||| +.+|+||||+|+||+++.++.+||+|
T Consensus 102 lv~e~~~-g~l~~~~~~---------~~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~d 168 (317)
T cd06635 102 LVMEYCL-GSASDLLEV---------HKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLAD 168 (317)
T ss_pred EEEeCCC-CCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEec
Confidence 9999996 588777632 2345899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccC---CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGM---GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
||++...... ....++..|+|||++. ...++.++|||||||++|||++|+.||....... .
T Consensus 169 fg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~--------- 232 (317)
T cd06635 169 FGSASIASPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-A--------- 232 (317)
T ss_pred CCCccccCCc------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-H---------
Confidence 9998754321 2235788999999874 4568899999999999999999999986421110 0
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
...+..... .+... ......+.+++.+||+.+|++||++.+|+..+..
T Consensus 233 ---~~~~~~~~~---------------~~~~~------~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 233 ---LYHIAQNES---------------PTLQS------NEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred ---HHHHHhccC---------------CCCCC------ccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 001110000 00000 0112347789999999999999999999876543
No 331
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.4e-32 Score=301.60 Aligned_cols=281 Identities=20% Similarity=0.219 Sum_probs=199.3
Q ss_pred HHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 154 ALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 154 el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
++..++++|++.+.||.|+||.||+|....+++.||||++... .....+.+..|++++++++||||+++++++.
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~---- 79 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFI---- 79 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEe----
Confidence 4556789999999999999999999999889999999987532 2223467889999999999999999999863
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
......++|+||+ +++|.+++. ...+++.....++.||+.||+||| +.+|+||||+|+|||++++
T Consensus 80 ~~~~~~~lv~e~~-~~~L~~~~~-----------~~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~ 144 (328)
T cd07856 80 SPLEDIYFVTELL-GTDLHRLLT-----------SRPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINEN 144 (328)
T ss_pred cCCCcEEEEeehh-ccCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCC
Confidence 2345688999998 568988873 234677888899999999999999 8999999999999999999
Q ss_pred CCeEEeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHH
Q 002857 312 MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~ 390 (873)
+.+||+|||++...... .....++..|+|||++.+ ..++.++||||||+++|||+||+.||...... .....
T Consensus 145 ~~~~l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~--~~~~~ 217 (328)
T cd07856 145 CDLKICDFGLARIQDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV--NQFSI 217 (328)
T ss_pred CCEEeCccccccccCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence 99999999999754321 122346888999998766 56899999999999999999999999653211 11111
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+...+.....++.+........ .............. .+........+.+++.+||+.+|++|||+.+++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 218 ITDLLGTPPDDVINTICSENTL--RFVQSLPKREPVPF-SEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred HHHHhCCCCHHHHHhccchhhH--HHHhhccccCCCcH-HHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1111110011111111100000 00000000000000 0111112346889999999999999999998754
No 332
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=4e-32 Score=291.63 Aligned_cols=251 Identities=21% Similarity=0.266 Sum_probs=190.4
Q ss_pred HHHHHHhhcCCCcceee--cccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeec
Q 002857 152 YEALYSATKGFSSENLI--GAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSR 228 (873)
Q Consensus 152 ~~el~~at~~f~~~~~L--G~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~ 228 (873)
..++....++|++.+.+ |+|+||.||+++...++..+|+|++....... .|+.....+ +|+||+++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~-- 78 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSV-- 78 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEE--
Confidence 34455556677777776 99999999999998899999999986432221 123222223 699999999986
Q ss_pred ccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 229 VDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 229 ~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
...+..++||||+++++|.+++.. ...+++.+++.++.||++||.||| +.+++||||||+||++
T Consensus 79 ---~~~~~~~iv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~ 142 (267)
T PHA03390 79 ---TTLKGHVLIMDYIKDGDLFDLLKK----------EGKLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLY 142 (267)
T ss_pred ---ecCCeeEEEEEcCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEE
Confidence 345679999999999999999842 237899999999999999999999 8999999999999999
Q ss_pred CCCC-CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhh
Q 002857 309 NDEM-TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNL 387 (873)
Q Consensus 309 d~~~-~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l 387 (873)
+.++ .++|+|||+++..... ....++..|+|||++.+..++.++||||||+++|||++|+.||.....+....
T Consensus 143 ~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~ 216 (267)
T PHA03390 143 DRAKDRIYLCDYGLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL 216 (267)
T ss_pred eCCCCeEEEecCccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhH
Confidence 9988 9999999998765322 12357899999999999899999999999999999999999997533222111
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCC-HHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMK-INDVEL 463 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPT-m~EVl~ 463 (873)
..+.... . .. .+.. ......+.+++.+||+.+|.+||+ ++|+++
T Consensus 217 ~~~~~~~---------~----~~------------~~~~-------~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 217 ESLLKRQ---------Q----KK------------LPFI-------KNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHhh---------c----cc------------CCcc-------cccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 1111100 0 00 0000 011234788999999999999996 587763
No 333
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.1e-32 Score=297.13 Aligned_cols=197 Identities=23% Similarity=0.245 Sum_probs=158.4
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEee
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEF 243 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey 243 (873)
+.+|.|+ .||.++...+++.||||+++.. .....+.+.+|++++++++|+||+++++++ ...+..+++|||
T Consensus 8 ~~~~~~~--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~-----~~~~~~~~~~e~ 80 (314)
T cd08216 8 KCFEDLM--IVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSF-----IVDSELYVVSPL 80 (314)
T ss_pred HhhcCCc--eEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhhee-----ecCCeEEEEEec
Confidence 3344444 4555555568899999998754 334456899999999999999999999985 456678999999
Q ss_pred cCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccc
Q 002857 244 MPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIAR 323 (873)
Q Consensus 244 ~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~ 323 (873)
+++|+|.+++.. .....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+.
T Consensus 81 ~~~~~l~~~l~~--------~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~ 149 (314)
T cd08216 81 MAYGSCEDLLKT--------HFPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSV 149 (314)
T ss_pred cCCCCHHHHHHH--------hcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccce
Confidence 999999999853 22345788899999999999999999 8999999999999999999999999999987
Q ss_pred cccccccc-----ccccccccccccCCCcccCCC--CCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 324 FLEATNEQ-----TSSIGVKGTTGYIAPEYGMGH--ETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 324 ~~~~~~~~-----~~~~~~~Gt~~Y~APE~l~~~--~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
.+...... .......++..|+|||++... .++.++||||||+++|||++|+.||...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~ 213 (314)
T cd08216 150 SMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDM 213 (314)
T ss_pred eeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence 55322111 111233477889999998763 5889999999999999999999999763
No 334
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.9e-32 Score=292.01 Aligned_cols=199 Identities=25% Similarity=0.324 Sum_probs=166.5
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc-chhHHHHHHHHHHhhh-hccceeeeeeeecccccCCceEEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD-ASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
|++.+.||+|++|.||+|+...+++.||||.+...... ......+|+..+.+++ |+||+++++++ ..++..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~-----~~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVF-----RENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHh-----hcCCcEEE
Confidence 56789999999999999999888899999998643322 2234567999999998 99999999985 44678899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+ +|+|.+++.. .....+++.+++.++.|++.+|.||| +.+++|+||+|+||++++++.++|+||
T Consensus 76 v~e~~-~~~l~~~~~~--------~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~ 143 (283)
T cd07830 76 VFEYM-EGNLYQLMKD--------RKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADF 143 (283)
T ss_pred EEecC-CCCHHHHHHh--------cccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeec
Confidence 99999 8899998853 22356899999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
|+++....... .....++..|+|||++.+ ..++.++||||||+++|||++|+.||...
T Consensus 144 ~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~ 202 (283)
T cd07830 144 GLAREIRSRPP---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS 202 (283)
T ss_pred ccceeccCCCC---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC
Confidence 99986543221 122457889999998754 45789999999999999999999998653
No 335
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.7e-32 Score=297.21 Aligned_cols=245 Identities=20% Similarity=0.254 Sum_probs=193.2
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeec
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFM 244 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~ 244 (873)
..+||+|+||.||++....+++.||||.+..........+.+|+.+++.++|+||+++++++ ..++..++||||+
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~~ 99 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWVVMEFL 99 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEE-----EeCCEEEEEEecC
Confidence 36799999999999999889999999998655444556789999999999999999999985 4466899999999
Q ss_pred CCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 245 PNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 245 ~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
++++|.+++. ...+++.....++.|++.||+||| +.+++||||+|+||+++.++.++|+|||++..
T Consensus 100 ~~~~L~~~~~-----------~~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~ 165 (292)
T cd06657 100 EGGALTDIVT-----------HTRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 165 (292)
T ss_pred CCCcHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEccccccee
Confidence 9999999873 234788899999999999999999 88999999999999999999999999999875
Q ss_pred cccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhh
Q 002857 325 LEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVD 404 (873)
Q Consensus 325 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid 404 (873)
..... .......++..|+|||++.+..++.++||||||+++|||++|..||...... .... .+.
T Consensus 166 ~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~~------------~~~ 229 (292)
T cd06657 166 VSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMK------------MIR 229 (292)
T ss_pred ccccc--ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHH------------HHH
Confidence 53322 1122345889999999998888899999999999999999999998642111 0000 000
Q ss_pred hhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 405 TLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 405 ~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+..... ........+.+++.+||+.+|.+||++.+|+.
T Consensus 230 ~~~~~~~~-------------------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 230 DNLPPKLK-------------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred hhCCcccC-------------------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 00000000 00011224678999999999999999999876
No 336
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=3.7e-32 Score=300.60 Aligned_cols=199 Identities=22% Similarity=0.277 Sum_probs=161.6
Q ss_pred eeeccc--CceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAG--NFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G--~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
..||+| +||+||++.+..+++.||||++..... ...+.+.+|+.+++.++|+||+++++++ ..++..++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~-----~~~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVF-----TTGSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeE-----ecCCceEEEE
Confidence 456776 999999999988999999999874332 2346788999999999999999999996 4466789999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+.+++|.+++.. .....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.++++||+.
T Consensus 79 e~~~~~~l~~~l~~--------~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~ 147 (328)
T cd08226 79 PFMAYGSANSLLKT--------YFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSH 147 (328)
T ss_pred ecccCCCHHHHHHh--------hcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHH
Confidence 99999999999853 12345888999999999999999999 89999999999999999999999999986
Q ss_pred ccccccccccc-----cccccccccccCCCcccCCC--CCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 322 ARFLEATNEQT-----SSIGVKGTTGYIAPEYGMGH--ETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 322 a~~~~~~~~~~-----~~~~~~Gt~~Y~APE~l~~~--~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
+.......... ......++..|+|||++.+. .++.++||||||+++|||++|+.||...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~ 213 (328)
T cd08226 148 LYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDM 213 (328)
T ss_pred HhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 54332211110 00112246679999998764 4789999999999999999999999764
No 337
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.2e-32 Score=290.57 Aligned_cols=245 Identities=24% Similarity=0.288 Sum_probs=185.9
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHH-HhhhhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVM-RNIIHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL-~~L~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.||+|+||.||+|....+++.||||++..... .....+..|..++ ...+|+|++++++++ ..++..++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSF-----QSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeE-----EcCCeEEEEE
Confidence 579999999999999988899999999864322 1223344555544 345899999999985 4566899999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++++|.+++.. ...+++..+..++.||+.||.||| +.+|+||||+|+||++++++.+||+|||+
T Consensus 77 e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~ 143 (260)
T cd05611 77 EYLNGGDCASLIKT----------LGGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGL 143 (260)
T ss_pred eccCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeeccc
Confidence 99999999999842 345888999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHH
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEE 401 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~e 401 (873)
++.... .....++..|+|||.+.+..++.++||||||+++|||+||..||....... . ...
T Consensus 144 ~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~--------~~~ 204 (260)
T cd05611 144 SRNGLE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-----V--------FDN 204 (260)
T ss_pred ceeccc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-----H--------HHH
Confidence 875432 122357889999999988888999999999999999999999996532110 0 000
Q ss_pred HhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 402 IVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 402 lid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
+....... +. . ....+...+.+++.+||+.+|++||++.++.+.|.
T Consensus 205 ~~~~~~~~--------------~~--~---~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 205 ILSRRINW--------------PE--E---VKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred HHhcccCC--------------CC--c---ccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 00000000 00 0 00012345789999999999999998876655443
No 338
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-32 Score=296.48 Aligned_cols=250 Identities=24% Similarity=0.348 Sum_probs=205.8
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
+|+..+.||.|.-|+||++.+..++..+|+|++.+.. .....+.+.|-+||+.++||.+..||+. ++.+...
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~-----fet~~~~ 152 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYAS-----FETDKYS 152 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhe-----eecccee
Confidence 4567799999999999999999888999999997443 3344678889999999999999999998 4678889
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
+||||||+||+|..+++. +..+.+++..+.-++..|+-||+||| ..|||.|||||+||||.++|++-|+
T Consensus 153 cl~meyCpGGdL~~Lrqk--------Qp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLs 221 (459)
T KOG0610|consen 153 CLVMEYCPGGDLHSLRQK--------QPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLS 221 (459)
T ss_pred EEEEecCCCccHHHHHhh--------CCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEee
Confidence 999999999999999864 56778999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccc---------------------------------cc---------------------ccccccccccccc
Q 002857 318 DFGIARFLEAT---------------------------------NE---------------------QTSSIGVKGTTGY 343 (873)
Q Consensus 318 DFGla~~~~~~---------------------------------~~---------------------~~~~~~~~Gt~~Y 343 (873)
||.++...... .. ...+...+||-.|
T Consensus 222 DFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEY 301 (459)
T KOG0610|consen 222 DFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEY 301 (459)
T ss_pred eccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccc
Confidence 99987532110 00 0011235699999
Q ss_pred CCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc--------CchhHHHHhhhhhhhhhhHHH
Q 002857 344 IAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA--------LPERVEEIVDTLFFKEIEEEE 415 (873)
Q Consensus 344 ~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~--------~~~~l~elid~~L~~~~~~r~ 415 (873)
+|||++.+...+.+.|.|+|||+||||+.|..||.+...+. .+...+.+. +.....+++...|.+++..|.
T Consensus 302 lAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRl 380 (459)
T KOG0610|consen 302 LAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-TLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRL 380 (459)
T ss_pred ccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-hHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhh
Confidence 99999999999999999999999999999999998854433 233333221 223689999999999998887
Q ss_pred H----HhhhccCCCCc
Q 002857 416 T----VYKYKKAPSSS 427 (873)
Q Consensus 416 ~----~~~i~~~p~~~ 427 (873)
. ..+++.||-..
T Consensus 381 g~~rGA~eIK~HpFF~ 396 (459)
T KOG0610|consen 381 GSKRGAAEIKRHPFFE 396 (459)
T ss_pred ccccchHHhhcCcccc
Confidence 7 56777777543
No 339
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-32 Score=320.81 Aligned_cols=204 Identities=22% Similarity=0.241 Sum_probs=156.9
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCC-cEEEEE------------------EeeccCCcchhHHHHHHHHHHhhhhcc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGA-PAVAIK------------------VFNFLHHDASKSFTVECEVMRNIIHRK 218 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g-~~VAVK------------------~l~~~~~~~~~~f~~Ei~iL~~L~HpN 218 (873)
..++|++.+.||+|+||.||++.++... ..+++| .+. ........+.+|+.+|++++|+|
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCC
Confidence 3578999999999999999998764322 122222 111 11122356889999999999999
Q ss_pred ceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeee
Q 002857 219 IIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAH 298 (873)
Q Consensus 219 IV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvH 298 (873)
|+++++++ ...+..++|++++. ++|.+++.... ..........+...|+.||+.||+||| +.+|||
T Consensus 225 Iv~l~~~~-----~~~~~~~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiH 290 (501)
T PHA03210 225 ILKIEEIL-----RSEANTYMITQKYD-FDLYSFMYDEA-----FDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIH 290 (501)
T ss_pred cCcEeEEE-----EECCeeEEEEeccc-cCHHHHHhhcc-----ccccccccHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence 99999996 44567899999984 57777764311 111222345667889999999999999 899999
Q ss_pred ccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCC
Q 002857 299 CDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPS 377 (873)
Q Consensus 299 rDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf 377 (873)
|||||+|||++.++.+||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|..++
T Consensus 291 rDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 291 RDIKLENIFLNCDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred CCCCHHHEEECCCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999999987643322 1222356999999999999999999999999999999999987543
No 340
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.7e-33 Score=313.32 Aligned_cols=244 Identities=25% Similarity=0.302 Sum_probs=193.1
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc---chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD---ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~---~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
|+.++.||.|+||.||-|++..+.+.||||.++....+ ...++..|+..|.+++|||+|.+-|+| -.+...|
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCy-----Lre~TaW 102 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCY-----LREHTAW 102 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCccccccee-----eccchHH
Confidence 55668899999999999999999999999998744333 335789999999999999999999985 4456689
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
|||||| -||-.|+|.- ..+++.+.++..|..+.+.||+||| +.+.||||||+.||||++.|.+||+|
T Consensus 103 LVMEYC-lGSAsDlleV---------hkKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaD 169 (948)
T KOG0577|consen 103 LVMEYC-LGSASDLLEV---------HKKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLAD 169 (948)
T ss_pred HHHHHH-hccHHHHHHH---------HhccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeecc
Confidence 999999 4588888742 3567888999999999999999999 99999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCC---CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG---HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~---~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
||.|.+.... ..++||+.|||||++.. ++|+-|.||||||++..||.-.++|+-.+.. ...+...+...
T Consensus 170 FGSAsi~~PA------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA-MSALYHIAQNe- 241 (948)
T KOG0577|consen 170 FGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNE- 241 (948)
T ss_pred ccchhhcCch------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-HHHHHHHHhcC-
Confidence 9999876432 34679999999998754 6899999999999999999999999644210 00011111000
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+.+.. .++ ...+.+++..||+.-|.+|||..+++.
T Consensus 242 --------sPtLqs--------------------~eW----S~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 242 --------SPTLQS--------------------NEW----SDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred --------CCCCCC--------------------chh----HHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 000100 111 234788999999999999999988764
No 341
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=4.4e-33 Score=315.35 Aligned_cols=246 Identities=24% Similarity=0.374 Sum_probs=194.7
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEee--c--cCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEE
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFN--F--LHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~--~--~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
..+||+|+|-+||+|.+..+|..||=-.++ . ......+.|..|+.+|+.|+|+|||+++.+... ..+...-+|
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d---~~n~~in~i 121 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVD---TDNKTINFI 121 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheec---CCCceeeee
Confidence 467999999999999998888877743332 1 223344789999999999999999999998653 234568899
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC-CCCCeEEecc
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN-DEMTACVADF 319 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd-~~~~vKLsDF 319 (873)
+|.+..|+|..|++ ..+.++...+..|++||++||.|||.. .++|||||||-+||+|+ .-|.+||+|+
T Consensus 122 TEL~TSGtLr~Y~k----------k~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDL 190 (632)
T KOG0584|consen 122 TELFTSGTLREYRK----------KHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDL 190 (632)
T ss_pred eecccCCcHHHHHH----------HhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecch
Confidence 99999999999994 345678889999999999999999965 79999999999999997 4589999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
|+|...... ....+.||+.|||||+.. ..|++..||||||+.|+||+|+..||..-.....-+.+.....-+..+
T Consensus 191 GLAtl~r~s----~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl 265 (632)
T KOG0584|consen 191 GLATLLRKS----HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAAL 265 (632)
T ss_pred hHHHHhhcc----ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHh
Confidence 999976432 223367999999999876 789999999999999999999999997643333333332222222233
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+-|+ ++.+||.+|+.. .++|||+.|++.
T Consensus 266 ~kV~dP---------------------------------evr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 266 SKVKDP---------------------------------EVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred hccCCH---------------------------------HHHHHHHHHhcC-chhccCHHHHhh
Confidence 322221 367899999999 999999999875
No 342
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.98 E-value=3.5e-32 Score=295.73 Aligned_cols=252 Identities=22% Similarity=0.288 Sum_probs=190.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhh-hccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|++.+.||+|+||.||+|.+..+++.||||+++.... .....+..|+.++.+.. |+||+++++++ ......
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~ 89 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYF-----ITDSDV 89 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheee-----ecCCeE
Confidence 567889999999999999999987799999999975432 23456777888777775 99999999996 345678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCCeeeCCCCCeEE
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCK-PPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s-~gIvHrDLKpsNILLd~~~~vKL 316 (873)
++||||+. ++|.+++.. ....+++..+..|+.||+.||+||| + .+|+||||+|+||++++++.+||
T Consensus 90 ~~v~e~~~-~~l~~l~~~---------~~~~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL 156 (296)
T cd06618 90 FICMELMS-TCLDKLLKR---------IQGPIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKL 156 (296)
T ss_pred EEEeeccC-cCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEE
Confidence 99999985 477776632 2346889999999999999999999 5 59999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCC----CCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHE----TSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~----~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
+|||++..+...... ....++..|+|||++.+.. ++.++||||||+++|||++|+.||.........+
T Consensus 157 ~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----- 228 (296)
T cd06618 157 CDFGISGRLVDSKAK---TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVL----- 228 (296)
T ss_pred CccccchhccCCCcc---cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHH-----
Confidence 999999765432211 2234788999999987654 7889999999999999999999986421111000
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
..+...... ..+... ....++.+++.+||+.+|++||++.+|+..
T Consensus 229 -------~~~~~~~~~-------------~~~~~~-------~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 229 -------TKILQEEPP-------------SLPPNE-------GFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred -------HHHhcCCCC-------------CCCCCC-------CCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011110000 000000 012357889999999999999999999765
No 343
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.98 E-value=1.1e-31 Score=297.16 Aligned_cols=204 Identities=22% Similarity=0.258 Sum_probs=166.6
Q ss_pred CCCcceeecccCceEEEEEEEcCC--CcEEEEEEeeccC--CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCc
Q 002857 161 GFSSENLIGAGNFASVYKGILFEG--APAVAIKVFNFLH--HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~--g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~ 235 (873)
+|++.+.||+|+||.||+++.... +..||||++.... ....+.+.+|+.+++++ +|+||+++++.+... .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVF-PGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeec-cccCC
Confidence 478889999999999999999877 8899999986432 22345788899999999 599999999875321 12334
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++++||+. ++|.+++. ....+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+|
T Consensus 80 ~~~~~~e~~~-~~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~k 145 (332)
T cd07857 80 ELYLYEELME-ADLHQIIR----------SGQPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELK 145 (332)
T ss_pred cEEEEEeccc-CCHHHHHh----------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEE
Confidence 5788999885 68998883 2456889999999999999999999 89999999999999999999999
Q ss_pred Eecccccccccccccc--ccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 316 VADFGIARFLEATNEQ--TSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 316 LsDFGla~~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|+|||+++.+...... .......|+..|+|||++.+ ..++.++||||||+++|+|++|+.||..
T Consensus 146 l~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~ 212 (332)
T cd07857 146 ICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKG 212 (332)
T ss_pred eCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCC
Confidence 9999999865432211 11223468999999998765 4689999999999999999999999875
No 344
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.98 E-value=3.5e-32 Score=290.76 Aligned_cols=249 Identities=26% Similarity=0.394 Sum_probs=197.6
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhh-hccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~ 235 (873)
++|.+.+.||+|+||.||+|+...+++.||+|++... .....+.+..|++++++++ |+||+++++++ ..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF-----QDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh-----cCCc
Confidence 4788999999999999999999889999999998642 2233467889999999998 99999999984 4567
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++++|.+++.. ...+++..++.|+.|++.||.||| +.+++|+||+|+||+++.++.++
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~ 142 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRK----------YGSLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIK 142 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEE
Confidence 89999999999999999842 346999999999999999999999 89999999999999999999999
Q ss_pred Eecccccccccccccc------------------ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCC
Q 002857 316 VADFGIARFLEATNEQ------------------TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPS 377 (873)
Q Consensus 316 LsDFGla~~~~~~~~~------------------~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf 377 (873)
|+|||++......... .......++..|+|||.+....++.++||||||++++++++|+.||
T Consensus 143 l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~ 222 (280)
T cd05581 143 ITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPF 222 (280)
T ss_pred ecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCC
Confidence 9999999865433211 1122335788999999988888999999999999999999999999
Q ss_pred CcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCC
Q 002857 378 DDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMK 457 (873)
Q Consensus 378 ~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPT 457 (873)
....... .+..+.+.. ...|. .....+.+++.+||+.+|++||+
T Consensus 223 ~~~~~~~-------------~~~~~~~~~--------------~~~~~---------~~~~~~~~li~~~l~~~p~~R~~ 266 (280)
T cd05581 223 RGSNEYL-------------TFQKILKLE--------------YSFPP---------NFPPDAKDLIEKLLVLDPQDRLG 266 (280)
T ss_pred CCccHHH-------------HHHHHHhcC--------------CCCCC---------ccCHHHHHHHHHHhcCCHhhCCC
Confidence 7532100 001110000 00000 01234788999999999999999
Q ss_pred H----HHHH
Q 002857 458 I----NDVE 462 (873)
Q Consensus 458 m----~EVl 462 (873)
+ .+++
T Consensus 267 ~~~~~~~ll 275 (280)
T cd05581 267 VNEGYDELK 275 (280)
T ss_pred cccCHHHHh
Confidence 9 6654
No 345
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=7.2e-33 Score=308.25 Aligned_cols=252 Identities=21% Similarity=0.276 Sum_probs=196.2
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEee--ccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFN--FLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~--~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~ 236 (873)
..|++.++||.||.+.||++.. .+.+.+|+|.+. ..+.+....|.+|++.|.+| .|.+||+|++|- ..++.
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE-----v~d~~ 434 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE-----VTDGY 434 (677)
T ss_pred chhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeee-----ccCce
Confidence 4688999999999999999965 555677887665 33445567899999999999 599999999993 45788
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
+|+||||-+ .+|.++|.. ....+....+..+..|++.++.++| ..||||-||||.|+|+- .|.+||
T Consensus 435 lYmvmE~Gd-~DL~kiL~k---------~~~~~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKL 500 (677)
T KOG0596|consen 435 LYMVMECGD-IDLNKILKK---------KKSIDPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKL 500 (677)
T ss_pred EEEEeeccc-ccHHHHHHh---------ccCCCchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEe
Confidence 999999874 499999953 2222332378899999999999999 89999999999999986 468999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCC-----------CCCcchhhHhHHHHHHHHHhCCCCCCcccccch
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-----------ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNL 385 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-----------~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~ 385 (873)
+|||+|..+..+.........+||+.||+||.+... +.+.+|||||+|||||+|+.|+.||.......
T Consensus 501 IDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~- 579 (677)
T KOG0596|consen 501 IDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQI- 579 (677)
T ss_pred eeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHH-
Confidence 999999988777666666677899999999987643 25688999999999999999999997531110
Q ss_pred hhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 386 NLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 386 ~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+..+.++...-++. .+|. ..+++++++.||+.||++|||+.|+++
T Consensus 580 -----------aKl~aI~~P~~~Iefp---------~~~~-----------~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 580 -----------AKLHAITDPNHEIEFP---------DIPE-----------NDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred -----------HHHHhhcCCCcccccc---------CCCC-----------chHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 1233444432211111 1111 123889999999999999999999875
No 346
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.98 E-value=9.8e-32 Score=290.13 Aligned_cols=242 Identities=19% Similarity=0.246 Sum_probs=182.4
Q ss_pred eecccCceEEEEEEEcCCCcEEEEEEeeccCCc---chhHHHHHHHHHH---hhhhccceeeeeeeecccccCCceEEEE
Q 002857 167 LIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD---ASKSFTVECEVMR---NIIHRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 167 ~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~---~~~~f~~Ei~iL~---~L~HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
.||+|+||.||+|....+++.||+|.+...... ....+..|..+++ ...|+||+++++++ ...+..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCEEEEE
Confidence 489999999999999888999999998643221 1223444544443 44799999999885 456678999
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccc
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFG 320 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFG 320 (873)
|||+++|+|.+++. ....+++..++.|+.|+++||.||| +.+|+||||||+||+++.++.+||+|||
T Consensus 76 ~e~~~g~~L~~~l~----------~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg 142 (278)
T cd05606 76 LDLMNGGDLHYHLS----------QHGVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLG 142 (278)
T ss_pred EecCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCc
Confidence 99999999998883 2356899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 321 IARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 321 la~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
++..+.... .....|+..|+|||++.++ .++.++||||||+++|||++|+.||.......... .
T Consensus 143 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~-----------~ 207 (278)
T cd05606 143 LACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-----------I 207 (278)
T ss_pred CccccCccC----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH-----------H
Confidence 987553321 1223589999999998754 68999999999999999999999997532111000 0
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-----CHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-----KINDVEL 463 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-----Tm~EVl~ 463 (873)
.... .... ..... .....+.+++.+|++.+|.+|| ++.++++
T Consensus 208 ~~~~---~~~~------------~~~~~-------~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 208 DRMT---LTMA------------VELPD-------SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HHHh---hccC------------CCCCC-------cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 0000 0000 00000 0123477899999999999999 8988864
No 347
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.98 E-value=1.2e-31 Score=299.03 Aligned_cols=283 Identities=18% Similarity=0.211 Sum_probs=200.1
Q ss_pred HHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 154 ALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 154 el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
.+....++|++.+.||+|+||.||+|....++..||||++..... ...+.+.+|++++++++|+||+++++++.....
T Consensus 9 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 9 TIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS 88 (343)
T ss_pred hhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc
Confidence 345567889999999999999999999988999999999854322 223568899999999999999999998643211
Q ss_pred -cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC
Q 002857 232 -QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND 310 (873)
Q Consensus 232 -~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~ 310 (873)
......++||||+ +++|.+++. ...+++..++.++.||+.||+||| +.+|+||||||+||+++.
T Consensus 89 ~~~~~~~~lv~e~~-~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~ 153 (343)
T cd07880 89 LDRFHDFYLVMPFM-GTDLGKLMK-----------HEKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNE 153 (343)
T ss_pred ccccceEEEEEecC-CCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcC
Confidence 1123468999999 779988873 235889999999999999999999 899999999999999999
Q ss_pred CCCeEEeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHH
Q 002857 311 EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQN 389 (873)
Q Consensus 311 ~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~ 389 (873)
++.+||+|||++...... .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||....... .+..
T Consensus 154 ~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~ 227 (343)
T cd07880 154 DCELKILDFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLME 227 (343)
T ss_pred CCCEEEeecccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence 999999999999865322 123357889999998876 458899999999999999999999997532111 1111
Q ss_pred HHhh--cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 390 WVQS--ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 390 ~~~~--~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.... ..+..+.+.+.......+ .... ..................+.+++.+|++.||++|||+.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 228 IMKVTGTPSKEFVQKLQSEDAKNY-----VKKL-PRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHhcCCCCHHHHHhhcchhHHHH-----HHhc-cccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1110 001111111110000000 0000 000000001111122345789999999999999999999874
No 348
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.98 E-value=5e-32 Score=301.63 Aligned_cols=284 Identities=19% Similarity=0.248 Sum_probs=197.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeeccc--------
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVD-------- 230 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~-------- 230 (873)
..+|.+.+.||.|+||.||+|....+++.||+|.+........+.+.+|++++++++|+||+++++.+....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 368999999999999999999998899999999987665566678999999999999999999998754321
Q ss_pred -ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 231 -YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 231 -~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
+......++||||++ ++|.+++. ...+++..++.++.||+.||.||| +.+|+||||||+||+++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~-----------~~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~ 148 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLE-----------QGPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFIN 148 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHH-----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEc
Confidence 111235789999997 58888773 235888999999999999999999 89999999999999998
Q ss_pred -CCCCeEEeccccccccccccccc-cccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchh
Q 002857 310 -DEMTACVADFGIARFLEATNEQT-SSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLN 386 (873)
Q Consensus 310 -~~~~vKLsDFGla~~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~ 386 (873)
+++.+||+|||+++......... ......++..|+|||.+.. ..++.++|||||||++|||++|+.||....... .
T Consensus 149 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~ 227 (342)
T cd07854 149 TEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE-Q 227 (342)
T ss_pred CCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 45678999999997653321111 1122347889999997654 568889999999999999999999997532211 1
Q ss_pred hHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 387 LQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 387 l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
....... .+....+.....+.. ...... ... ..+.. ...........++.+++.+||+.||++|||+.||+.
T Consensus 228 ~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~-~~~-~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 228 MQLILES-VPVVREEDRNELLNV-IPSFVR-NDG-GEPRR-PLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHHHHh-cCCCChHHhhhhhhh-hhhhhh-hcc-cccCC-CHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 1111110 000000000000000 000000 000 00000 001111112345789999999999999999999864
No 349
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.98 E-value=4.8e-32 Score=292.99 Aligned_cols=256 Identities=21% Similarity=0.266 Sum_probs=194.8
Q ss_pred CCCcceeecccCceEEEEEEEc---CCCcEEEEEEeeccC----CcchhHHHHHHHHHHhh-hhccceeeeeeeeccccc
Q 002857 161 GFSSENLIGAGNFASVYKGILF---EGAPAVAIKVFNFLH----HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~---~~g~~VAVK~l~~~~----~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~ 232 (873)
+|++.+.||+|++|.||+++.. .+++.||||+++... ....+.+.+|++++.++ +|+||+++++.+ .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF-----Q 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee-----e
Confidence 4778899999999999999864 356789999987432 22345688999999999 599999999874 4
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM 312 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~ 312 (873)
.+...++||||+++|+|.+++.. ...+++..+..++.|+++||.||| ..+++||||+|+||+++.++
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~ 142 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQ----------REHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEG 142 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhh----------cCCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCC
Confidence 56678999999999999999842 345888899999999999999999 89999999999999999999
Q ss_pred CeEEeccccccccccccccccccccccccccCCCcccCCCC--CCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHH
Q 002857 313 TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHE--TSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~--~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~ 390 (873)
.++|+|||+++....... .......++..|+|||.+.+.. .+.++||||||+++|||++|..||....... .
T Consensus 143 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~---- 216 (288)
T cd05583 143 HVVLTDFGLSKEFLAEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN-S---- 216 (288)
T ss_pred CEEEEECccccccccccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc-h----
Confidence 999999999886543321 1122345789999999987665 7889999999999999999999985321110 0
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
..++......... ..+. .....+.+++.+||+.+|++|||+.+|.+.|+.
T Consensus 217 --------~~~~~~~~~~~~~----------~~~~---------~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 217 --------QSEISRRILKSKP----------PFPK---------TMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred --------HHHHHHHHHccCC----------CCCc---------ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 0011110000000 0000 012246789999999999999999988887764
No 350
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.98 E-value=8.3e-32 Score=298.19 Aligned_cols=274 Identities=20% Similarity=0.246 Sum_probs=193.6
Q ss_pred hcCCC-cceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcc--------------hhHHHHHHHHHHhhhhccceeee
Q 002857 159 TKGFS-SENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDA--------------SKSFTVECEVMRNIIHRKIIKVV 223 (873)
Q Consensus 159 t~~f~-~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~--------------~~~f~~Ei~iL~~L~HpNIV~ll 223 (873)
.++|. +.+.||+|+||.||+|.+..+++.||||+++...... ...+.+|++++++++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 34565 3577999999999999998889999999986432221 12578899999999999999999
Q ss_pred eeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCC
Q 002857 224 TACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKP 303 (873)
Q Consensus 224 g~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKp 303 (873)
+++ ..++..++||||+. |+|.+++. ....+++.....++.|++.||+||| +.+|+|+||+|
T Consensus 87 ~~~-----~~~~~~~lv~e~~~-~~l~~~l~----------~~~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~ 147 (335)
T PTZ00024 87 DVY-----VEGDFINLVMDIMA-SDLKKVVD----------RKIRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSP 147 (335)
T ss_pred EEE-----ecCCcEEEEEeccc-cCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccH
Confidence 985 44567899999996 69998883 2345889999999999999999999 89999999999
Q ss_pred CCeeeCCCCCeEEecccccccccccc------------ccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHH
Q 002857 304 SNILLNDEMTACVADFGIARFLEATN------------EQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEM 370 (873)
Q Consensus 304 sNILLd~~~~vKLsDFGla~~~~~~~------------~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~EL 370 (873)
+||+++.++.+||+|||+++...... .........++..|+|||++.+. .++.++||||||+++|||
T Consensus 148 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el 227 (335)
T PTZ00024 148 ANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAEL 227 (335)
T ss_pred HHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999997654111 00111123467889999998764 468999999999999999
Q ss_pred HhCCCCCCcccccchhhHHHHhhcCch----hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHH
Q 002857 371 FTGLRPSDDMFKDNLNLQNWVQSALPE----RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVA 446 (873)
Q Consensus 371 lTGk~Pf~~~~~~~~~l~~~~~~~~~~----~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~ 446 (873)
+||+.||....... ....+...... .+.+..+..... .. ..................+.+++.+
T Consensus 228 ~tg~~p~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~li~~ 295 (335)
T PTZ00024 228 LTGKPLFPGENEID--QLGRIFELLGTPNEDNWPQAKKLPLYT---------EF-TPRKPKDLKTIFPNASDDAIDLLQS 295 (335)
T ss_pred HhCCCCCCCCCHHH--HHHHHHHHhCCCchhhCcchhhccccc---------cc-CcCCcccHHHhCcCCChHHHHHHHH
Confidence 99999997532211 11111100000 000000000000 00 0000000001111123457899999
Q ss_pred hhccCcCCCCCHHHHHH
Q 002857 447 CSAELPGERMKINDVEL 463 (873)
Q Consensus 447 CL~~dP~eRPTm~EVl~ 463 (873)
||+.+|++|||+.||+.
T Consensus 296 ~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 296 LLKLNPLERISAKEALK 312 (335)
T ss_pred HcCCCchhccCHHHHhc
Confidence 99999999999999875
No 351
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.98 E-value=1.2e-31 Score=299.11 Aligned_cols=287 Identities=16% Similarity=0.216 Sum_probs=202.9
Q ss_pred CHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeec
Q 002857 151 SYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSR 228 (873)
Q Consensus 151 s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~ 228 (873)
...++..++++|++.+.||+|+||.||+|....+++.||+|+++... ....+.+.+|+.++++++|+||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 34667788999999999999999999999988889999999986432 2234568889999999999999999998643
Q ss_pred cc-ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCee
Q 002857 229 VD-YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNIL 307 (873)
Q Consensus 229 ~~-~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNIL 307 (873)
.. +......+++++++ +++|.+++. ...+++..+..++.||++||+||| +.+|+||||||+||+
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl 152 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVK-----------CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLA 152 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEE
Confidence 22 12234567888877 789988873 235889999999999999999999 899999999999999
Q ss_pred eCCCCCeEEeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchh
Q 002857 308 LNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLN 386 (873)
Q Consensus 308 Ld~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~ 386 (873)
+++++.+||+|||+++..... .....++..|+|||++.+ ..++.++||||||+++|||++|+.||...... ..
T Consensus 153 l~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~ 226 (345)
T cd07877 153 VNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQ 226 (345)
T ss_pred EcCCCCEEEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HH
Confidence 999999999999999754321 123457889999998766 46888999999999999999999999653211 11
Q ss_pred hHHHHhhc--CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 387 LQNWVQSA--LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 387 l~~~~~~~--~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
+....... ....+...+.... .+.........+..... +........+.+++..|++.+|.+||++.+++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 227 LKLILRLVGTPGAELLKKISSES-----ARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHHHHhCCCCHHHHhhcccHh-----HHHHHHHhcccCCcchh-hhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 11111100 0011110000000 00000010011110000 0000112357899999999999999999988754
No 352
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.98 E-value=9.8e-32 Score=288.04 Aligned_cols=270 Identities=21% Similarity=0.273 Sum_probs=196.6
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
|+..+.||+|++|.||+|+...+++.||+|++.... ....+.+..|++++++++|+||+++++++ ......++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVI-----HTERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhh-----hcCCceEE
Confidence 566788999999999999998889999999987543 33346788999999999999999999985 44577999
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||++ ++|.+++.. ....+++..++.++.|++.||+||| ..+|+||||+|+||++++++.+||+||
T Consensus 76 v~e~~~-~~l~~~i~~---------~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~ 142 (282)
T cd07829 76 VFEYCD-MDLKKYLDK---------RPGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADF 142 (282)
T ss_pred EecCcC-cCHHHHHHh---------hccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecC
Confidence 999997 599999853 1246899999999999999999999 889999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC---
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL--- 395 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~--- 395 (873)
|+++....... ......++..|+|||++.+. .++.++||||||+++|||++|+.||...... .....+....
T Consensus 143 g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~ 218 (282)
T cd07829 143 GLARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI--DQLFKIFQILGTP 218 (282)
T ss_pred CcccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHHHhCCC
Confidence 99986543221 11223457789999998776 7899999999999999999999998653211 1111111100
Q ss_pred -chhHHHHhhhh-hhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 -PERVEEIVDTL-FFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 -~~~l~elid~~-L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
......+.+-. ..... ... +. .............+.+++..||+.+|++||++.+|+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~------~~~---~~-~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 219 TEESWPGVTKLPDYKPTF------PKF---PP-KDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cHHHHHhhcccccccccc------ccc---Cc-cchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00111110000 00000 000 00 0000001111345889999999999999999999874
No 353
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.98 E-value=1.2e-31 Score=293.94 Aligned_cols=248 Identities=23% Similarity=0.282 Sum_probs=191.0
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
+.|+..+.||+|+||.||+|++..++..||+|.+.... ......+.+|+++++.++|+|++++++++. ....
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 89 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-----REHT 89 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEE-----cCCe
Confidence 34667789999999999999998889999999986422 223356888999999999999999999863 4567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+. |+|.+++.. ....+++.++..++.|++.||.||| +.+++||||+|+||+++.++.+||
T Consensus 90 ~~lv~e~~~-~~l~~~~~~---------~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl 156 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEV---------HKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKL 156 (308)
T ss_pred eEEEEEccC-CCHHHHHHH---------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEE
Confidence 899999996 688877632 2345788999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccC---CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM---GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+|||++...... ....++..|+|||++. ...++.++|||||||++|||++|+.||....... ..
T Consensus 157 ~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~------ 223 (308)
T cd06634 157 GDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-AL------ 223 (308)
T ss_pred CCcccceeecCc------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HH------
Confidence 999998765322 2235788999999874 3567889999999999999999999985421110 00
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
..+..... +... . ......+.+++.+||+.+|++||++.+|+...
T Consensus 224 ------~~~~~~~~----------------~~~~--~---~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 224 ------YHIAQNES----------------PALQ--S---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred ------HHHhhcCC----------------CCcC--c---ccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 00000000 0000 0 01123477899999999999999999987653
No 354
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.8e-33 Score=310.69 Aligned_cols=251 Identities=24% Similarity=0.297 Sum_probs=199.9
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
.|.+...||.|+||.||+|..+.++-..|-|++........++|+-||+||....||+||+|++.| ...+.++|+
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ay-----y~enkLwil 107 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAY-----YFENKLWIL 107 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHH-----hccCceEEE
Confidence 356678899999999999999888888899999877777889999999999999999999999984 446678999
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccc
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFG 320 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFG 320 (873)
.|||.||.++.++-. -...|.+.++.-++.|++.||.||| ++.|||||||+.|||++-+|.++|+|||
T Consensus 108 iEFC~GGAVDaimlE---------L~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFG 175 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLE---------LGRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFG 175 (1187)
T ss_pred EeecCCchHhHHHHH---------hccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeeccc
Confidence 999999999988743 3567999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcccC-----CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 321 IARFLEATNEQTSSIGVKGTTGYIAPEYGM-----GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 321 la~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
.+....... .....+.||+.|||||+.+ ..+|+.++||||||++|.||.-+.+|...... ..
T Consensus 176 VSAKn~~t~--qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-----MR------ 242 (1187)
T KOG0579|consen 176 VSAKNKSTR--QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MR------ 242 (1187)
T ss_pred ccccchhHH--hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch-----HH------
Confidence 986432221 1223467999999999864 46899999999999999999999999654211 00
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
++-..-..+ +|.......+ ...+.+++..||..||..||+++++++
T Consensus 243 ------VllKiaKSe------------PPTLlqPS~W----s~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 243 ------VLLKIAKSE------------PPTLLQPSHW----SRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred ------HHHHHhhcC------------CCcccCcchh----hhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 000000011 1111111112 224778999999999999999999874
No 355
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=2.2e-31 Score=292.76 Aligned_cols=244 Identities=24% Similarity=0.303 Sum_probs=188.4
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
|...+.||+|+||.||+|++..+++.||+|++..... .....+.+|++++++++|+|++++++++ ......+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCY-----LKEHTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEE-----EeCCEEE
Confidence 5556889999999999999988899999999864322 2335688899999999999999999996 3456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+. |+|.+++.. ....+++.+++.++.||+.||.||| +.+|+|+||+|+||+++.++.+||+|
T Consensus 98 lv~e~~~-~~l~~~l~~---------~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~d 164 (313)
T cd06633 98 LVMEYCL-GSASDLLEV---------HKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLAD 164 (313)
T ss_pred EEEecCC-CCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEee
Confidence 9999995 578777732 2345889999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccC---CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGM---GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
||++..... .....++..|+|||++. ...++.++||||||+++|||++|..||....... ...
T Consensus 165 fg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~--~~~------ 230 (313)
T cd06633 165 FGSASKSSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALY------ 230 (313)
T ss_pred cCCCcccCC------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH--HHH------
Confidence 999864321 12345788999999974 4568889999999999999999999986521100 000
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+.. .. .+... . ......+.+++.+||+.+|++||++.+++.
T Consensus 231 -----~~~~----~~------------~~~~~--~---~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 231 -----HIAQ----ND------------SPTLQ--S---NEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred -----HHHh----cC------------CCCCC--c---cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 00 00000 0 001224778999999999999999999875
No 356
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=2e-31 Score=288.42 Aligned_cols=200 Identities=24% Similarity=0.340 Sum_probs=166.6
Q ss_pred CCCcceeecccCceEEEEEEEc---CCCcEEEEEEeeccC----CcchhHHHHHHHHHHhh-hhccceeeeeeeeccccc
Q 002857 161 GFSSENLIGAGNFASVYKGILF---EGAPAVAIKVFNFLH----HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~---~~g~~VAVK~l~~~~----~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~ 232 (873)
+|++.+.||+|+||.||++... .++..||+|+++... ....+.+.+|++++.++ +|+||+++++.+ .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 4788899999999999999874 367899999987432 22346688899999999 599999999874 4
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM 312 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~ 312 (873)
.+...++||||+++++|.+++.. ...+++..+..++.||+.||.||| +.+++||||+|+|||++.++
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~ 142 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQ----------RERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNG 142 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCC
Confidence 45678999999999999999842 345788889999999999999999 89999999999999999999
Q ss_pred CeEEeccccccccccccccccccccccccccCCCcccCCC--CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 313 TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH--ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
.+||+|||+++....... .......|+..|+|||++.+. .++.++||||||+++|+|++|+.||..
T Consensus 143 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 210 (290)
T cd05613 143 HVVLTDFGLSKEFHEDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTV 210 (290)
T ss_pred CEEEeeCccceecccccc-cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCc
Confidence 999999999986543221 112234588999999998753 467899999999999999999999863
No 357
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.3e-32 Score=296.88 Aligned_cols=247 Identities=21% Similarity=0.304 Sum_probs=200.0
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcc--hhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDA--SKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~--~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
=|...+.||+|.|+.|-+|++.-+|..||||++.+..-+. ...+.+|+..|+.++|||||+||.+ ......+|
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEV-----iDTQTKly 93 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEV-----IDTQTKLY 93 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeeh-----hcccceEE
Confidence 3667788999999999999998899999999998654443 3578899999999999999999998 35677899
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC-CCCCeEEe
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN-DEMTACVA 317 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd-~~~~vKLs 317 (873)
||+|.-.+|+|.+||.. ....+.+....+++.||+.|+.|.| ...+|||||||+||.+- .-|-+||.
T Consensus 94 LiLELGD~GDl~DyImK---------He~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLT 161 (864)
T KOG4717|consen 94 LILELGDGGDLFDYIMK---------HEEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLT 161 (864)
T ss_pred EEEEecCCchHHHHHHh---------hhccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEee
Confidence 99999999999999953 4567899999999999999999999 89999999999999876 55799999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCC-cchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETS-SYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s-~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||++..+...... ....|++.|-|||++.+..|+ ++.||||||||||-|+.|+.||+...+.
T Consensus 162 DFGFSNkf~PG~kL---~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS------------- 225 (864)
T KOG4717|consen 162 DFGFSNKFQPGKKL---TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS------------- 225 (864)
T ss_pred eccccccCCCcchh---hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch-------------
Confidence 99999877655433 235699999999999999875 5689999999999999999999763222
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+.+.-|.|-.+.. | .....+..+|+..||..||++|.+.+||+.
T Consensus 226 ETLTmImDCKYtv--------------P---------shvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 226 ETLTMIMDCKYTV--------------P---------SHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hhhhhhhcccccC--------------c---------hhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 1222333322211 0 112234667888899999999999888764
No 358
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=8.5e-32 Score=299.93 Aligned_cols=282 Identities=18% Similarity=0.238 Sum_probs=197.9
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhhhhccceeeeeeeecccc-cC
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY-QG 233 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~-~~ 233 (873)
...++|++.+.||+|++|.||+|++..+++.||||++... .....+.+.+|+.++++++|+||+++++++..... ..
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 4567899999999999999999999888999999998643 22233567889999999999999999987532211 12
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
....++|+||+ +++|.+++. ...+++..++.++.||++||+||| +.+|+||||||+||++++++.
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~-----------~~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~ 156 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVK-----------CQKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCE 156 (343)
T ss_pred cccEEEEEecC-CCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCC
Confidence 23489999998 669999883 245899999999999999999999 899999999999999999999
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
+||+|||++...... .....++..|+|||.+.+ ..++.++||||||+++|||+||+.||...... .....+.
T Consensus 157 ~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~--~~~~~i~ 229 (343)
T cd07851 157 LKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI--DQLKRIM 229 (343)
T ss_pred EEEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHH
Confidence 999999999865332 123357889999998765 36789999999999999999999999653211 1111111
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
........++......... ............... ..........+.+++.+||+.+|++|||+.||+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 230 NLVGTPDEELLQKISSESA--RNYIQSLPQMPKKDF-KEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HhcCCCCHHHHhhccchhH--HHHHHhccccCCCCH-HHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 1111000111111000000 000000000000000 0000111346889999999999999999999864
No 359
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=320.43 Aligned_cols=271 Identities=23% Similarity=0.351 Sum_probs=205.2
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcC-------CCcEEEEEEeeccCC-cchhHHHHHHHHHHhh-hhccceeeeeeee
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFE-------GAPAVAIKVFNFLHH-DASKSFTVECEVMRNI-IHRKIIKVVTACS 227 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~-------~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~ 227 (873)
...++..+.+.||+|.||.|++|.... ....||||.++.... .+.+.+..|+++|+.+ +|+||+.++|+|.
T Consensus 293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t 372 (609)
T KOG0200|consen 293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT 372 (609)
T ss_pred echhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence 334455666799999999999998541 145799999975433 4557899999999999 6999999999985
Q ss_pred cccccCCceEEEEEeecCCCChhhhccccccccccc----CCC--CCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccC
Q 002857 228 RVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRH----KAP--GNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDI 301 (873)
Q Consensus 228 ~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~----~~~--~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDL 301 (873)
. .+..++|+||+..|+|.++|+......... ... ..++....+.++.|||.||+||+ +.++|||||
T Consensus 373 ~-----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDL 444 (609)
T KOG0200|consen 373 Q-----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDL 444 (609)
T ss_pred c-----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhh
Confidence 3 567899999999999999997533000000 011 24889999999999999999999 899999999
Q ss_pred CCCCeeeCCCCCeEEecccccccccccccccccccc-ccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCc
Q 002857 302 KPSNILLNDEMTACVADFGIARFLEATNEQTSSIGV-KGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDD 379 (873)
Q Consensus 302 KpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~-~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~ 379 (873)
.++|||+..+..+||+|||+|+.............. .-...|||||.+....++.|||||||||+||||+| |..||..
T Consensus 445 AaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~ 524 (609)
T KOG0200|consen 445 AARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG 524 (609)
T ss_pred hhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC
Confidence 999999999999999999999965443322211110 13556999999999999999999999999999999 8899865
Q ss_pred ccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHH
Q 002857 380 MFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIN 459 (873)
Q Consensus 380 ~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~ 459 (873)
.... ..+.+++... .. .+.+..|..++.++++.||+.+|++||++.
T Consensus 525 ~~~~-~~l~~~l~~G------------~r---------------------~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~ 570 (609)
T KOG0200|consen 525 IPPT-EELLEFLKEG------------NR---------------------MEQPEHCSDEIYDLMKSCWNADPEDRPTFS 570 (609)
T ss_pred CCcH-HHHHHHHhcC------------CC---------------------CCCCCCCCHHHHHHHHHHhCCCcccCCCHH
Confidence 2101 0111111100 00 011223455788999999999999999999
Q ss_pred HHHHHHHHHH
Q 002857 460 DVELGLRLIK 469 (873)
Q Consensus 460 EVl~~Le~i~ 469 (873)
++++.|+...
T Consensus 571 ~~~~~~~~~l 580 (609)
T KOG0200|consen 571 ECVEFFEKHL 580 (609)
T ss_pred HHHHHHHHHH
Confidence 9999999853
No 360
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=1.5e-31 Score=284.28 Aligned_cols=251 Identities=20% Similarity=0.267 Sum_probs=191.9
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-----CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-----HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-----~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
+|.+.++||+|+||.||++.+...+..+++|+++... ......+..|+.++++++||||+++++++ ....
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASF-----LERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHH-----hcCC
Confidence 4788899999999999999987776677777765322 22334577899999999999999999985 4456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++++|.+++... ......+++..++.++.|++.||.||| +.+++|+||+|+||++++ +.+|
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~ 145 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEEL------KHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLK 145 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHH------hhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEe
Confidence 789999999999999988531 123457899999999999999999999 899999999999999985 5699
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||+++....... ......++..|+|||.+.+..++.++||||||+++|+|++|..||..... ....
T Consensus 146 l~d~g~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~-----~~~~---- 214 (260)
T cd08222 146 IGDFGVSRLLMGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF-----LSVV---- 214 (260)
T ss_pred ecccCceeecCCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHH----
Confidence 999999986543221 12234578899999999888889999999999999999999999864211 0000
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+.. .. .+.. .......+.+++.+||+.+|++||++.|+++
T Consensus 215 ----~~~~~----~~------------~~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 215 ----LRIVE----GP------------TPSL------PETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ----HHHHc----CC------------CCCC------cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 00000 00 0000 0011235778999999999999999999875
No 361
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-32 Score=310.45 Aligned_cols=204 Identities=29% Similarity=0.397 Sum_probs=173.0
Q ss_pred CcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeeccc-ccCCceEEEE
Q 002857 163 SSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVD-YQGNDFKALV 240 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~-~~~~~~~~LV 240 (873)
...+.||+|+||.||+|+++.+|+.||||.++... ....+...+|+++|++++|+|||+++++-.... ..-.....+|
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 44578999999999999999999999999998543 334567899999999999999999999732111 0113457899
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC--CCC--CeEE
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN--DEM--TACV 316 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd--~~~--~vKL 316 (873)
||||.+|||...|.. ..+...|++.+.+.++.+++.||.||| ..+|+||||||.||++- .++ ..||
T Consensus 96 mEyC~gGsL~~~L~~-------PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKL 165 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNS-------PENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKL 165 (732)
T ss_pred EeecCCCcHHHHhcC-------cccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEee
Confidence 999999999999964 245678999999999999999999999 89999999999999983 333 5799
Q ss_pred eccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+|||.|+.++.+. .....+||..|.+||++.. ..|+...|.|||||++||.+||..||..
T Consensus 166 tDfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 166 TDFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred ecccccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 9999999876543 4456789999999999984 7888899999999999999999999976
No 362
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=5.5e-32 Score=322.71 Aligned_cols=260 Identities=20% Similarity=0.235 Sum_probs=187.0
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccc----
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY---- 231 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~---- 231 (873)
.-.++|++..+||+||||.||+++.+-+|+.+|||++.... ......+.+|+.+|++|+|||||+++....+..-
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 34567889999999999999999999999999999987443 3344678889999999999999999753322100
Q ss_pred ---------------------------------------------------c----------------------------
Q 002857 232 ---------------------------------------------------Q---------------------------- 232 (873)
Q Consensus 232 ---------------------------------------------------~---------------------------- 232 (873)
.
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0
Q ss_pred -----------------------CC--------ceEEEEEeecCCCChhhhcccccccccccCCCCCC-chhhhHHHHHH
Q 002857 233 -----------------------GN--------DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNL-NSLERLNIAID 280 (873)
Q Consensus 233 -----------------------~~--------~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~L-s~~~~l~Ia~q 280 (873)
.+ ..+||-||||+.-+|.++++. +... .....++++.+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~----------N~~~~~~d~~wrLFre 705 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR----------NHFNSQRDEAWRLFRE 705 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh----------cccchhhHHHHHHHHH
Confidence 00 235677888888777777742 1111 35567899999
Q ss_pred HHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccccc----------------ccccccccccccccccC
Q 002857 281 VASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEA----------------TNEQTSSIGVKGTTGYI 344 (873)
Q Consensus 281 Ia~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~----------------~~~~~~~~~~~Gt~~Y~ 344 (873)
|+.||+|+| +.+||||||||.||+||++..+||+|||+|..... .......+..+||..|+
T Consensus 706 IlEGLaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYv 782 (1351)
T KOG1035|consen 706 ILEGLAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYV 782 (1351)
T ss_pred HHHHHHHHH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeee
Confidence 999999999 89999999999999999999999999999986220 00111234567999999
Q ss_pred CCcccCCC---CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhc
Q 002857 345 APEYGMGH---ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYK 421 (873)
Q Consensus 345 APE~l~~~---~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~ 421 (873)
|||++.+. .|+.|+|+||+|||++||+. ||....+....+ ..+-+..+...
T Consensus 783 APEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL------------~~LR~g~iP~~----------- 836 (1351)
T KOG1035|consen 783 APELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASIL------------TNLRKGSIPEP----------- 836 (1351)
T ss_pred cHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHH------------HhcccCCCCCC-----------
Confidence 99998875 49999999999999999985 565532221111 11111111110
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 422 KAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 422 ~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..........-..++.++++.||.+||||.|++.
T Consensus 837 --------~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 837 --------ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred --------cccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 0000000112357999999999999999999873
No 363
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=3.1e-31 Score=279.12 Aligned_cols=237 Identities=27% Similarity=0.346 Sum_probs=189.3
Q ss_pred ecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeec
Q 002857 168 IGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFM 244 (873)
Q Consensus 168 LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~ 244 (873)
||+|+||.||++.+..+++.+|+|+++.... .....+..|++++++++|+||+++++.+ ..+...++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF-----QTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe-----ecCCeeEEEEecC
Confidence 6999999999999988899999999874432 2345789999999999999999999884 5677899999999
Q ss_pred CCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 245 PNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 245 ~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
++++|.+++.. ...+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++..
T Consensus 76 ~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~ 142 (250)
T cd05123 76 PGGELFSHLSK----------EGRFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKE 142 (250)
T ss_pred CCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCccee
Confidence 99999999842 336899999999999999999999 89999999999999999999999999999986
Q ss_pred cccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhh
Q 002857 325 LEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVD 404 (873)
Q Consensus 325 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid 404 (873)
..... .......++..|+|||...+...+.++||||||+++|+|++|+.||...... .. ...+..
T Consensus 143 ~~~~~--~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~-----------~~~~~~ 207 (250)
T cd05123 143 LSSEG--SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK--EI-----------YEKILK 207 (250)
T ss_pred cccCC--CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HH-----------HHHHhc
Confidence 54332 1223345788999999998888999999999999999999999999653210 00 001110
Q ss_pred hhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHH
Q 002857 405 TLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIND 460 (873)
Q Consensus 405 ~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~E 460 (873)
..+ ..+.. ....+.+++.+||..+|++||++.+
T Consensus 208 ~~~--------------~~~~~---------~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 208 DPL--------------RFPEF---------LSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCC--------------CCCCC---------CCHHHHHHHHHHhcCCHhhCCCccc
Confidence 000 00000 0234778999999999999999955
No 364
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=8e-33 Score=330.98 Aligned_cols=256 Identities=23% Similarity=0.311 Sum_probs=198.4
Q ss_pred HHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccC
Q 002857 156 YSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 156 ~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
...+-+++...+||.|.||.||.|...++|...|+|-++.. .....+.+.+|+.+|..|+|||+|+++|+- .+
T Consensus 1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVE-----vH 1305 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVE-----VH 1305 (1509)
T ss_pred ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCcee-----ec
Confidence 34456777889999999999999999999999999987633 244557789999999999999999999983 44
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
.+..+|.||||++|+|.+++.. ....++.....+..|++.|++||| +.|||||||||.||+|+.+|.
T Consensus 1306 Rekv~IFMEyC~~GsLa~ll~~----------gri~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~ 1372 (1509)
T KOG4645|consen 1306 REKVYIFMEYCEGGSLASLLEH----------GRIEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGL 1372 (1509)
T ss_pred HHHHHHHHHHhccCcHHHHHHh----------cchhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCc
Confidence 5678999999999999999842 445666667778899999999999 899999999999999999999
Q ss_pred eEEeccccccccccccc--cccccccccccccCCCcccCCC---CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhH
Q 002857 314 ACVADFGIARFLEATNE--QTSSIGVKGTTGYIAPEYGMGH---ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~--~~~~~~~~Gt~~Y~APE~l~~~---~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~ 388 (873)
+|++|||.|..+..... ........||+.|||||++.+. ....++||||+|||++||+||++||.....+- .+.
T Consensus 1373 iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~-aIM 1451 (1509)
T KOG4645|consen 1373 IKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW-AIM 1451 (1509)
T ss_pred EEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh-HHH
Confidence 99999999987755421 1122345699999999999875 35667999999999999999999987632221 111
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+ .... .|..+. ....+-.+++..||+.||++|.++.|+++
T Consensus 1452 y~V--------------~~gh-------------~Pq~P~------~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1452 YHV--------------AAGH-------------KPQIPE------RLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred hHH--------------hccC-------------CCCCch------hhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 111 0100 011110 11223457999999999999998886654
No 365
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=2.3e-31 Score=279.03 Aligned_cols=208 Identities=24% Similarity=0.289 Sum_probs=173.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCC----cEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeeccccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGA----PAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g----~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~ 232 (873)
...|+....||+|.||.||+|.-.++. +.+|||.++.... .-.....+|+.+++.++|+||+.|..++. .
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl----~ 98 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFL----S 98 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHh----c
Confidence 356888999999999999999655432 3689999975432 23457889999999999999999999863 3
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC-
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE- 311 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~- 311 (873)
.+...+|++||.+. +|.+.|+-+.. .....++...+..|+.||+.|+.||| ++=|+||||||.|||+..+
T Consensus 99 ~d~~v~l~fdYAEh-DL~~II~fHr~-----~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdg 169 (438)
T KOG0666|consen 99 HDKKVWLLFDYAEH-DLWHIIKFHRA-----SKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDG 169 (438)
T ss_pred cCceEEEEehhhhh-hHHHHHHHhcc-----chhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccC
Confidence 36779999999987 99999965322 33467899999999999999999999 8899999999999999877
Q ss_pred ---CCeEEeccccccccccccccc-cccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 312 ---MTACVADFGIARFLEATNEQT-SSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 312 ---~~vKLsDFGla~~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|.+||+|||+++++...-... ....++-|+.|+|||++.+. .||.+.||||.|||+.||+|-++.|..
T Consensus 170 perG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 170 PERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred CccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 899999999999886544322 34456789999999999886 689999999999999999999988876
No 366
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=8.4e-31 Score=316.88 Aligned_cols=146 Identities=25% Similarity=0.380 Sum_probs=129.2
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|.+.++||+|+||.||+|.+..+++.||||+++.... .....+..|+.++..++|+||+++++++ .....
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~~ 78 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL-----QSANN 78 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE-----EECCE
Confidence 678999999999999999999988899999999874322 2236788899999999999999999875 44567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||+.+++|.+++.. ...+++..++.|+.||+.||+||| ..+|+||||||+|||++.++.+||
T Consensus 79 ~~lVmEy~~g~~L~~li~~----------~~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL 145 (669)
T cd05610 79 VYLVMEYLIGGDVKSLLHI----------YGYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKL 145 (669)
T ss_pred EEEEEeCCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEE
Confidence 9999999999999999842 345788899999999999999999 889999999999999999999999
Q ss_pred ecccccc
Q 002857 317 ADFGIAR 323 (873)
Q Consensus 317 sDFGla~ 323 (873)
+|||+++
T Consensus 146 ~DFGls~ 152 (669)
T cd05610 146 TDFGLSK 152 (669)
T ss_pred EeCCCCc
Confidence 9999986
No 367
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=2.1e-31 Score=301.50 Aligned_cols=249 Identities=24% Similarity=0.330 Sum_probs=200.1
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcc--hhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDA--SKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~--~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
+..|.+...||+|.|+.|.+|++..++..||||++++..-.. ...+.+|+++|..++|||||+++.+. .....
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~-----~t~~~ 129 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVI-----ETEAT 129 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeee-----eecce
Confidence 457889999999999999999999999999999997544332 24588999999999999999999984 55678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
+++||||+.+|.+.++|. ....+.+.....++.|+.+|++|+| .+.|||||||++||||+.++++||
T Consensus 130 lylV~eya~~ge~~~yl~----------~~gr~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikI 196 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLV----------KHGRMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKI 196 (596)
T ss_pred eEEEEEeccCchhHHHHH----------hcccchhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceee
Confidence 999999999999999994 3455666888999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCC-CcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET-SSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||++.++.... ......|++.|.|||++.+..| ++++|+||+|++||-|+.|..||++..-
T Consensus 197 aDfgfS~~~~~~~---~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l------------- 260 (596)
T KOG0586|consen 197 ADFGFSTFFDYGL---MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL------------- 260 (596)
T ss_pred eccccceeecccc---cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-------------
Confidence 9999999886433 2334679999999999999865 6789999999999999999999986321
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
.++-++.+...+. .|. - .....-+++.+++-.+|.+|+++++|.+.
T Consensus 261 ----k~Lr~rvl~gk~r----------Ip~-----~----ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 261 ----KELRPRVLRGKYR----------IPF-----Y----MSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred ----ccccchheeeeec----------ccc-----e----eechhHHHHHHhhccCccccCCHHHhhhh
Confidence 1111111211110 000 0 01124568888888999999999988653
No 368
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5e-31 Score=287.68 Aligned_cols=202 Identities=25% Similarity=0.339 Sum_probs=177.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.+.|..-++||+||||.||-.+.+.+|+.+|.|.+.+. ........++|-.||++++.+.||.+--. |+..+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA-----feTkd 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA-----FETKD 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee-----ecCCC
Confidence 35678889999999999999999999999999988532 23334567889999999999999998766 47788
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
.++||+..|.||+|.-+|.. .....+++..++-++.+|+.||++|| ..+||.|||||+|||||+.|+++
T Consensus 259 ~LClVLtlMNGGDLkfHiyn--------~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvR 327 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYN--------HGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVR 327 (591)
T ss_pred ceEEEEEeecCCceeEEeec--------cCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeE
Confidence 99999999999999999864 34578999999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|+|+|+|..+...... ...+||.+|||||++.+..|+...|.|||||+||||+.|+.||..
T Consensus 328 ISDLGLAvei~~g~~~---~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 328 ISDLGLAVEIPEGKPI---RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred eeccceEEecCCCCcc---ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 9999999877654332 233799999999999999999999999999999999999999975
No 369
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=1e-30 Score=280.74 Aligned_cols=277 Identities=19% Similarity=0.282 Sum_probs=218.1
Q ss_pred HHHHHhhcCCCcceeecccCceEEEEEEEcCC-----CcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeee
Q 002857 153 EALYSATKGFSSENLIGAGNFASVYKGILFEG-----APAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTAC 226 (873)
Q Consensus 153 ~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~-----g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c 226 (873)
+++.....+++...++-+|.||.||+|.|++. .+.|-+|.++... +-....+..|.-++..+.|||+..+.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 45555567788889999999999999988653 3456777765332 23345688888888889999999999998
Q ss_pred ecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCe
Q 002857 227 SRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNI 306 (873)
Q Consensus 227 ~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNI 306 (873)
. ++....+++|.++.-|+|..||...... .......++..+...++.|++.|++||| +.+|||.||.++|+
T Consensus 357 i----e~~~~P~V~y~~~~~gNLK~FL~~Cr~~--~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNC 427 (563)
T KOG1024|consen 357 I----EDYATPFVLYPATGVGNLKSFLQICRGD--DPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNC 427 (563)
T ss_pred e----eccCcceEEEeccCcchHHHHHHHhccC--CCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcc
Confidence 6 4566789999999999999999743322 1245567888899999999999999999 99999999999999
Q ss_pred eeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccch
Q 002857 307 LLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNL 385 (873)
Q Consensus 307 LLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~ 385 (873)
+||+...+||+|=.+++.+...+......+...+..||+||.+....|+.++|||||||+||||+| |+.|+......+
T Consensus 428 vIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE- 506 (563)
T KOG1024|consen 428 VIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE- 506 (563)
T ss_pred eehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-
Confidence 999999999999999997766554444444456889999999999999999999999999999999 999986632211
Q ss_pred hhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 386 NLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 386 ~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
...+ +.+.+. ...+-+|+++|..++.-||...|++||+++|++.-|
T Consensus 507 -m~~y----------------lkdGyR-----------------laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cL 552 (563)
T KOG1024|consen 507 -MEHY----------------LKDGYR-----------------LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICL 552 (563)
T ss_pred -HHHH----------------Hhccce-----------------ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHH
Confidence 1111 111100 011235788899999999999999999999999999
Q ss_pred HHHHHhhh
Q 002857 466 RLIKKKLL 473 (873)
Q Consensus 466 e~i~~~l~ 473 (873)
.+....+.
T Consensus 553 seF~~qlt 560 (563)
T KOG1024|consen 553 SEFHTQLT 560 (563)
T ss_pred HHHHHHHh
Confidence 98765543
No 370
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.8e-30 Score=297.72 Aligned_cols=266 Identities=22% Similarity=0.310 Sum_probs=213.7
Q ss_pred cCHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeec
Q 002857 150 VSYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSR 228 (873)
Q Consensus 150 ~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~ 228 (873)
+.++.+-.-++-|++.+.||+|.+|.||+++.+.+++.+|+|++.... +..+++..|.++|+.. .|||++.++|++..
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 445555666788999999999999999999999999999999987543 3347788899999988 79999999999987
Q ss_pred ccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 229 VDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 229 ~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
.....+++++||||||.+||..|+++. .....+.|..+..|++.+++||++|| ...++|||||-.|||+
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn--------~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLL 156 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKN--------TKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLL 156 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhh--------hcccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEE
Confidence 766778899999999999999999975 22667999999999999999999999 8999999999999999
Q ss_pred CCCCCeEEeccccccccccccccccccccccccccCCCcccCCC-----CCCcchhhHhHHHHHHHHHhCCCCCCccccc
Q 002857 309 NDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-----ETSSYGDVYSFGILLLEMFTGLRPSDDMFKD 383 (873)
Q Consensus 309 d~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-----~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~ 383 (873)
+.++.+||.|||.+..+...... .....||+.|||||++.-. .|+.++|+||||++..||.-|.+|+-++..-
T Consensus 157 T~e~~VKLvDFGvSaQldsT~gr--RnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm 234 (953)
T KOG0587|consen 157 TENAEVKLVDFGVSAQLDSTVGR--RNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM 234 (953)
T ss_pred eccCcEEEeeeeeeeeeeccccc--ccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh
Confidence 99999999999999877553322 2235699999999997643 5778899999999999999999998764211
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCch-hHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSST-QRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~-~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
- .+ +.....+|.... ...+ .+++.+++..||..|-++||++.+++
T Consensus 235 r----------------aL--------------F~IpRNPPPkLkrp~kW----s~~FndFIs~cL~Kd~e~RP~~~~ll 280 (953)
T KOG0587|consen 235 R----------------AL--------------FLIPRNPPPKLKRPKKW----SKKFNDFISTCLVKDYEQRPSTEELL 280 (953)
T ss_pred h----------------hh--------------ccCCCCCCccccchhhH----HHHHHHHHHHHHhhccccCcchhhhc
Confidence 0 00 000111111111 1112 34588899999999999999999887
Q ss_pred H
Q 002857 463 L 463 (873)
Q Consensus 463 ~ 463 (873)
+
T Consensus 281 ~ 281 (953)
T KOG0587|consen 281 K 281 (953)
T ss_pred c
Confidence 4
No 371
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=281.24 Aligned_cols=279 Identities=19% Similarity=0.231 Sum_probs=202.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhh--c----cceeeeeeeeccccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIH--R----KIIKVVTACSRVDYQ 232 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~H--p----NIV~llg~c~~~~~~ 232 (873)
+++|.+...+|+|.||.|-+..+...+..||||+++..... .+..+-|+++|+++.+ | -+|++.+| ++
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~w-----Fd 161 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDW-----FD 161 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehh-----hh
Confidence 78999999999999999999999888999999999854332 3556779999999943 2 26777777 45
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC--
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND-- 310 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~-- 310 (873)
-.++.+||+|.+ |-|+.++|.. +....++..++..|+.|++++++||| +.+++|.||||+|||+.+
T Consensus 162 yrghiCivfell-G~S~~dFlk~--------N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~ 229 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKE--------NNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSE 229 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhcc--------CCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccc
Confidence 678899999988 6699999964 55677899999999999999999999 999999999999999831
Q ss_pred ------------------CCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh
Q 002857 311 ------------------EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT 372 (873)
Q Consensus 311 ------------------~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT 372 (873)
+..+||+|||.|.+-.... ..++.|..|+|||++.+-.++.++||||+||||.||.|
T Consensus 230 ~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Elyt 304 (415)
T KOG0671|consen 230 YFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYT 304 (415)
T ss_pred eEEEeccCCccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeec
Confidence 3468999999998643322 34568999999999999999999999999999999999
Q ss_pred CCCCCCcccc-cchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHH-----------HhhhccCCCCch-hHHHHHHHHHH
Q 002857 373 GLRPSDDMFK-DNLNLQNWVQSALPERVEEIVDTLFFKEIEEEET-----------VYKYKKAPSSST-QRSIILECLNS 439 (873)
Q Consensus 373 Gk~Pf~~~~~-~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~-----------~~~i~~~p~~~~-~~~~~~e~~~~ 439 (873)
|...|..-.+ +...+.+.+...++.. ++.......+-.+.. .......+.+.. ......+...+
T Consensus 305 G~~LFqtHen~EHLaMMerIlGp~P~~---mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~ 381 (415)
T KOG0671|consen 305 GETLFQTHENLEHLAMMERILGPIPSR---MIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQ 381 (415)
T ss_pred cceecccCCcHHHHHHHHHhhCCCcHH---HhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhH
Confidence 9999976331 2222223232222222 111110000000000 011111111111 01111233456
Q ss_pred HHHHHHHhhccCcCCCCCHHHHHH
Q 002857 440 ICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 440 L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
|.+|+..+|..||.+|+|+.|++.
T Consensus 382 LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 382 LFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHHHHHccCccccccHHHHhc
Confidence 999999999999999999999764
No 372
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=9.5e-31 Score=270.38 Aligned_cols=249 Identities=22% Similarity=0.265 Sum_probs=189.0
Q ss_pred CcceeecccCceEEEEEEEcCCCcEEEEEEeecc-CCcchhHHHHHHHHHHhhh-hccceeeeeeeecccccCCceEEEE
Q 002857 163 SSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL-HHDASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~-~~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
+....||.|..|.|++++.+.++...|||.+... ..++.++++..+.++..-+ .|.||+.+|+|. .+...++-
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi-----~n~dV~Ic 169 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI-----TNTDVFIC 169 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe-----eCchHHHH
Confidence 4557899999999999999999999999998643 3445577888888877664 899999999964 44557788
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccc
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFG 320 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFG 320 (873)
||.|. .-++.+|+. ....+++...-++...+++||.||-+ +++|+|||+||+|||+|+.|++||+|||
T Consensus 170 MelMs-~C~ekLlkr---------ik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFG 237 (391)
T KOG0983|consen 170 MELMS-TCAEKLLKR---------IKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFG 237 (391)
T ss_pred HHHHH-HHHHHHHHH---------hcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeeccc
Confidence 89883 355666532 34558888888999999999999996 7899999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcccCC---CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 321 IARFLEATNEQTSSIGVKGTTGYIAPEYGMG---HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 321 la~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~---~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
++-.+..... .+...|-+.|||||.+.- ..|+.++||||||++|+||.||+.||.....+-..+.+.+
T Consensus 238 IsGrlvdSkA---htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvl------ 308 (391)
T KOG0983|consen 238 ISGRLVDSKA---HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVL------ 308 (391)
T ss_pred ccceeecccc---cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHH------
Confidence 9976644332 233468999999998764 3789999999999999999999999987433321111111
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+ .++ |....... ....+.+++..||+.|+.+||...++++
T Consensus 309 ------n----~eP------------P~L~~~~g----FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 309 ------N----EEP------------PLLPGHMG----FSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred ------h----cCC------------CCCCcccC----cCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 1 110 10000000 1224788999999999999999998765
No 373
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=1.2e-29 Score=262.88 Aligned_cols=239 Identities=27% Similarity=0.345 Sum_probs=188.7
Q ss_pred CceEEEEEEEcCCCcEEEEEEeeccCCcc-hhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeecCCCChh
Q 002857 172 NFASVYKGILFEGAPAVAIKVFNFLHHDA-SKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLE 250 (873)
Q Consensus 172 ~fG~VYkg~~~~~g~~VAVK~l~~~~~~~-~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~ 250 (873)
+||.||+|++..+++.+|+|++....... .+.+.+|++.+++++|+||+++++++. .....++||||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFE-----DEDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhhee-----eCCEEEEEEeCCCCCCHH
Confidence 58999999998888999999997554444 678999999999999999999999863 346789999999999999
Q ss_pred hhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccccccccc
Q 002857 251 EWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNE 330 (873)
Q Consensus 251 ~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~ 330 (873)
+++.. ...+++..++.++.+++.+|.||| ..+|+|+||+|+||+++.++.++|+|||.+.......
T Consensus 76 ~~~~~----------~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~- 141 (244)
T smart00220 76 DLLKK----------RGRLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG- 141 (244)
T ss_pred HHHHh----------ccCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-
Confidence 99843 222888999999999999999999 8899999999999999999999999999998765432
Q ss_pred cccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhh
Q 002857 331 QTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKE 410 (873)
Q Consensus 331 ~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~ 410 (873)
......++..|++||.+.+..++.++||||||+++++|++|..||...... ..... .+. ...
T Consensus 142 --~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-~~~~~------------~~~---~~~ 203 (244)
T smart00220 142 --LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-LELFK------------KIG---KPK 203 (244)
T ss_pred --ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHH------------HHh---ccC
Confidence 222345788999999998888999999999999999999999998652111 00111 000 000
Q ss_pred hhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 411 IEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 411 ~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.. .... . ......+.+++.+||..+|++||++.++++
T Consensus 204 ~~------------~~~~-~---~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 204 PP------------FPPP-E---WKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred CC------------Cccc-c---ccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 00 0000 0 001235888999999999999999999976
No 374
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=4.5e-30 Score=270.71 Aligned_cols=181 Identities=22% Similarity=0.190 Sum_probs=152.9
Q ss_pred cCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeecCCCChh
Q 002857 171 GNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLE 250 (873)
Q Consensus 171 G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~ 250 (873)
|.+|.||++.+..+++.||+|++.... .+..|...+....||||+++++++ ......++||||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYI-----VSEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhhe-----ecCCeEEEEEecCCCCCHH
Confidence 899999999999999999999986432 234455555666799999999985 4567799999999999999
Q ss_pred hhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccccccccc
Q 002857 251 EWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNE 330 (873)
Q Consensus 251 ~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~ 330 (873)
+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||.+.......
T Consensus 74 ~~l~~----------~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~- 139 (237)
T cd05576 74 SHISK----------FLNIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC- 139 (237)
T ss_pred HHHHH----------hcCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-
Confidence 99842 234889999999999999999999 8999999999999999999999999999886543321
Q ss_pred cccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 331 QTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 331 ~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
....++..|+|||++.+..++.++||||||+++|||++|+.|+..
T Consensus 140 ----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~ 184 (237)
T cd05576 140 ----DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVEC 184 (237)
T ss_pred ----ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc
Confidence 123356789999999888899999999999999999999988643
No 375
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=1.5e-29 Score=299.73 Aligned_cols=213 Identities=21% Similarity=0.209 Sum_probs=145.1
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCC----CcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeec-cccc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEG----APAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSR-VDYQ 232 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~----g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~-~~~~ 232 (873)
..++|++.++||+|+||.||+|++..+ +..||||++..... .+.+..| .+....+.+++.++..+.. ....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 567899999999999999999999888 88999998753221 1111111 1122222333332222111 1113
Q ss_pred CCceEEEEEeecCCCChhhhccccccc----c------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCC
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEE----D------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIK 302 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~----~------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLK 302 (873)
.+...+|||||+.+++|.++++..... . .............+..|+.||+.||+||| +.+|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence 456789999999999999998531100 0 00000111223446689999999999999 8999999999
Q ss_pred CCCeeeCC-CCCeEEeccccccccccccccccccccccccccCCCcccCCC----------------------CCCcchh
Q 002857 303 PSNILLND-EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH----------------------ETSSYGD 359 (873)
Q Consensus 303 psNILLd~-~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~----------------------~~s~ksD 359 (873)
|+|||++. ++.+||+|||+++.+...... ......+++.|+|||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999985 579999999999865432221 22345689999999965322 2345679
Q ss_pred hHhHHHHHHHHHhCCCCCC
Q 002857 360 VYSFGILLLEMFTGLRPSD 378 (873)
Q Consensus 360 VwSfGvvL~ELlTGk~Pf~ 378 (873)
||||||+||||+++..+++
T Consensus 362 VwSlGviL~el~~~~~~~~ 380 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSD 380 (566)
T ss_pred cHHHHHHHHHHHhCcCCCc
Confidence 9999999999999877654
No 376
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=5.4e-30 Score=269.31 Aligned_cols=255 Identities=22% Similarity=0.366 Sum_probs=207.3
Q ss_pred CHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecc
Q 002857 151 SYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRV 229 (873)
Q Consensus 151 s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~ 229 (873)
.+++++..|. +.||+|+|+.|-.++...++..+|||++.+.......+..+|++++.+. .|+||++|+.+
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLief---- 144 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEF---- 144 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHH----
Confidence 4678888774 7899999999999999999999999999877666678899999999999 59999999999
Q ss_pred cccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
|+++...|||||-|.||+|..+|+ ....+++.+.-.+.++||.||.||| .++|.||||||+|||..
T Consensus 145 -FEdd~~FYLVfEKm~GGplLshI~----------~~~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~ 210 (463)
T KOG0607|consen 145 -FEDDTRFYLVFEKMRGGPLLSHIQ----------KRKHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCE 210 (463)
T ss_pred -hcccceEEEEEecccCchHHHHHH----------HhhhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeec
Confidence 477888999999999999999995 3567899999999999999999999 99999999999999986
Q ss_pred CCC---CeEEecccccccccccccc-----ccccccccccccCCCcccC---C--CCCCcchhhHhHHHHHHHHHhCCCC
Q 002857 310 DEM---TACVADFGIARFLEATNEQ-----TSSIGVKGTTGYIAPEYGM---G--HETSSYGDVYSFGILLLEMFTGLRP 376 (873)
Q Consensus 310 ~~~---~vKLsDFGla~~~~~~~~~-----~~~~~~~Gt~~Y~APE~l~---~--~~~s~ksDVwSfGvvL~ELlTGk~P 376 (873)
... -+||+||.+..-......- ......+|+..|||||+.. + ..|+.+.|.||||||||-|++|..|
T Consensus 211 ~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpP 290 (463)
T KOG0607|consen 211 SPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPP 290 (463)
T ss_pred CCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCC
Confidence 544 4799999987543322211 1122346889999999743 2 3688999999999999999999999
Q ss_pred CCcccccc------------------------hhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCch
Q 002857 377 SDDMFKDN------------------------LNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSST 428 (873)
Q Consensus 377 f~~~~~~~------------------------~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~ 428 (873)
|.+.-..+ ..+.+.-|..+....++++...+..+...+....++..|||...
T Consensus 291 FvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~ 366 (463)
T KOG0607|consen 291 FVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQR 366 (463)
T ss_pred ccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccc
Confidence 97632211 12223334555667788899999888888888888899998654
No 377
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-30 Score=286.58 Aligned_cols=244 Identities=24% Similarity=0.377 Sum_probs=201.3
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEe
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
.++||.|.||+||-|+++++|+.||||++.+.. ......+.+|+.||++++||.||.+--.| +..+..++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~-----ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF-----ETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-----cCCceEEEEeh
Confidence 579999999999999999999999999997542 33346799999999999999999998774 67788999999
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC---CCeEEecc
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE---MTACVADF 319 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~---~~vKLsDF 319 (873)
-+. |+..+.|-. ...+.|++..-..++.||+.||.||| .++|+|.||||+||||.+. -.+||+||
T Consensus 644 Kl~-GDMLEMILS--------sEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDF 711 (888)
T KOG4236|consen 644 KLH-GDMLEMILS--------SEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDF 711 (888)
T ss_pred hhc-chHHHHHHH--------hhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccc
Confidence 995 566555532 35677888888899999999999999 8999999999999999643 37999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccc--cch-----hhHHHHh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFK--DNL-----NLQNWVQ 392 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~--~~~-----~l~~~~~ 392 (873)
|+|+++.... ....++||+.|+|||++....|...-|+||.|||+|--++|..||....+ ++. .+..--|
T Consensus 712 GfARiIgEks---FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW 788 (888)
T KOG4236|consen 712 GFARIIGEKS---FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPW 788 (888)
T ss_pred cceeecchhh---hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCch
Confidence 9999886532 23457899999999999999999999999999999999999999975321 111 1112225
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCch
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSST 428 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~ 428 (873)
..+.+...++++..+.....+|.++.+-+.|||...
T Consensus 789 ~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~ 824 (888)
T KOG4236|consen 789 SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD 824 (888)
T ss_pred hhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence 556667889999999998889999998899998654
No 378
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-30 Score=309.03 Aligned_cols=255 Identities=24% Similarity=0.315 Sum_probs=204.6
Q ss_pred HHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeec---cCCcchhHHHHHHHHHHhhhhccceeeeeeeec
Q 002857 152 YEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNF---LHHDASKSFTVECEVMRNIIHRKIIKVVTACSR 228 (873)
Q Consensus 152 ~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~---~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~ 228 (873)
..++....++|.+.++||+|+||.|..++++.+++.+|+|++++ .......-|..|-.+|..-+.+=|+.+.-.
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA--- 143 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA--- 143 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH---
Confidence 34556667899999999999999999999999999999999985 334455679999999998888889998766
Q ss_pred ccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 229 VDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 229 ~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
|+++.++|+|||||+||+|-.+|.. ...+++.....++..|+.||.-|| +.|+|||||||+||||
T Consensus 144 --FQD~~~LYlVMdY~pGGDlltLlSk----------~~~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLl 208 (1317)
T KOG0612|consen 144 --FQDERYLYLVMDYMPGGDLLTLLSK----------FDRLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLL 208 (1317)
T ss_pred --hcCccceEEEEecccCchHHHHHhh----------cCCChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEe
Confidence 5889999999999999999999942 237899999999999999999999 9999999999999999
Q ss_pred CCCCCeEEeccccccccccccccccccccccccccCCCcccCC-----CCCCcchhhHhHHHHHHHHHhCCCCCCcccc-
Q 002857 309 NDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-----HETSSYGDVYSFGILLLEMFTGLRPSDDMFK- 382 (873)
Q Consensus 309 d~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~- 382 (873)
|..|++||+|||.+-.+..+.... ....+||+-|++||++.. +.|+..+|.||+||++|||+.|..||....-
T Consensus 209 d~~GHikLADFGsClkm~~dG~V~-s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslv 287 (1317)
T KOG0612|consen 209 DKSGHIKLADFGSCLKMDADGTVR-SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLV 287 (1317)
T ss_pred cccCcEeeccchhHHhcCCCCcEE-eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHH
Confidence 999999999999998776544333 334679999999998753 5789999999999999999999999965210
Q ss_pred ----c------chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHH---HhhhccCCCCch
Q 002857 383 ----D------NLNLQNWVQSALPERVEEIVDTLFFKEIEEEET---VYKYKKAPSSST 428 (873)
Q Consensus 383 ----~------~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~---~~~i~~~p~~~~ 428 (873)
. ...+.. ...+++...+++...+... +.|.. +.+++.||....
T Consensus 288 eTY~KIm~hk~~l~FP~--~~~VSeeakdLI~~ll~~~-e~RLgrngiedik~HpFF~g 343 (1317)
T KOG0612|consen 288 ETYGKIMNHKESLSFPD--ETDVSEEAKDLIEALLCDR-EVRLGRNGIEDIKNHPFFEG 343 (1317)
T ss_pred HHHHHHhchhhhcCCCc--ccccCHHHHHHHHHHhcCh-hhhcccccHHHHHhCccccC
Confidence 1 111110 1124557778887776542 33333 677788887543
No 379
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=5.9e-31 Score=269.11 Aligned_cols=283 Identities=18% Similarity=0.245 Sum_probs=203.5
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEee--ccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccC---Cc
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFN--FLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG---ND 235 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~--~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~---~~ 235 (873)
.|.-..+||+|.||.||+|+..++++.||+|+.- .....-.....+|+++|..++|+|++.++..|....-.. ..
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 4556689999999999999999999999998653 233334456789999999999999999999996543221 23
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..+|||.+++. +|.-+|. .....++..++.+++.++..||.|+| ...|+|||+|+.|+||+.++.+|
T Consensus 98 t~ylVf~~ceh-DLaGlLs---------n~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilk 164 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLS---------NRKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILK 164 (376)
T ss_pred eeeeeHHHhhh-hHHHHhc---------CccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEE
Confidence 47999999977 8888884 23467889999999999999999999 89999999999999999999999
Q ss_pred Eeccccccccccccc--cccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccc-hhhHHHH
Q 002857 316 VADFGIARFLEATNE--QTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDN-LNLQNWV 391 (873)
Q Consensus 316 LsDFGla~~~~~~~~--~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~-~~l~~~~ 391 (873)
|+|||+++.+..... ....+..+-|+.|++||.+.+. .|+++.|||.-|||+.||+||.+-+.+..+.. ..+....
T Consensus 165 lADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~L 244 (376)
T KOG0669|consen 165 LADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQL 244 (376)
T ss_pred eeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHH
Confidence 999999986644332 2223344579999999998875 68999999999999999999998887643322 1111111
Q ss_pred hhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHH------HHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 392 QSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLN------SICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 392 ~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~------~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
-..+.. ..+.+.+.-+..+.+...|....+...+.+..+ ..++++..++..||.+|+++.+++..
T Consensus 245 cGs~tk--------evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 245 CGSITK--------EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred hccCCc--------ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 111111 000111111111111111222222222222232 57789999999999999999988743
No 380
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.96 E-value=2e-30 Score=270.96 Aligned_cols=252 Identities=23% Similarity=0.295 Sum_probs=207.2
Q ss_pred HhhcCCCcc-eeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCC
Q 002857 157 SATKGFSSE-NLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 157 ~at~~f~~~-~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~ 234 (873)
..|++|++. ++||-|-.|.|.....+.+++.+|+|++.. .....+|+++--.. .|+|||.+++++.. .+.+.
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeN-s~~~r 131 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYEN-SYQGR 131 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhh-hccCc
Confidence 356677664 689999999999999999999999999852 24456788765544 69999999999743 34566
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC---CC
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN---DE 311 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd---~~ 311 (873)
.-+++|||.|+||.|.+.+++ .....+++.+.-.|+.||+.|+.||| +.+|.||||||+|+|.. .|
T Consensus 132 kcLLiVmE~meGGeLfsriq~--------~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~n 200 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQD--------RGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPN 200 (400)
T ss_pred eeeEeeeecccchHHHHHHHH--------cccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCC
Confidence 678899999999999999964 45567999999999999999999999 99999999999999996 45
Q ss_pred CCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCccccc--------
Q 002857 312 MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKD-------- 383 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~-------- 383 (873)
-.+||+|||+|+...... ......-|+.|.|||++...+|+...|+||+||++|-|+.|.+||......
T Consensus 201 a~lKLtDfGFAK~t~~~~---~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~ 277 (400)
T KOG0604|consen 201 APLKLTDFGFAKETQEPG---DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKR 277 (400)
T ss_pred cceEecccccccccCCCc---cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHh
Confidence 579999999999654322 222345799999999999999999999999999999999999999753221
Q ss_pred -----chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCch
Q 002857 384 -----NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSST 428 (873)
Q Consensus 384 -----~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~ 428 (873)
...+..--|..+.+..++++..+|..++.+|.++.++..|||...
T Consensus 278 rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~ 327 (400)
T KOG0604|consen 278 RIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ 327 (400)
T ss_pred HhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence 112333345566678899999999999999999999999999765
No 381
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.8e-30 Score=270.58 Aligned_cols=201 Identities=23% Similarity=0.285 Sum_probs=175.7
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
-++|..+++||+|.||.|.+++.+.+++.+|||++++.. .+....-..|-.+|+..+||.+..+--. ++..+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYs-----FQt~d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYS-----FQTQD 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhh-----hccCc
Confidence 367899999999999999999999999999999998543 2333456778899999999999887554 57888
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
.+++||||..||.|.-+|. ....+++.....+-..|+.||.||| +++||.||||.+|.|||.+|++|
T Consensus 242 rlCFVMeyanGGeLf~HLs----------rer~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIK 308 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLS----------RERVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIK 308 (516)
T ss_pred eEEEEEEEccCceEeeehh----------hhhcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceE
Confidence 9999999999999998883 4567888888889999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|+|||+.+.--. .........||+.|+|||++....|....|.|.+|||+|||+.|+.||..
T Consensus 309 itDFGLCKE~I~--~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn 370 (516)
T KOG0690|consen 309 ITDFGLCKEEIK--YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN 370 (516)
T ss_pred eeecccchhccc--ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc
Confidence 999999984322 22334457899999999999999999999999999999999999999975
No 382
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-29 Score=286.72 Aligned_cols=240 Identities=23% Similarity=0.247 Sum_probs=190.7
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++.|.....+|.|+|+.|-.+.+..+++..++|++.... .+..+|+.++... +|+||+++.+.+ .++.+.
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~-----~~~~~~ 391 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVY-----EDGKEI 391 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeeccee-----cCCcee
Confidence 667888888999999999999999999999999997542 3345677777666 799999999995 567789
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee-CCCCCeEE
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL-NDEMTACV 316 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL-d~~~~vKL 316 (873)
++|||.+.++-|.+.+.. ..... ..+..|+.+|+.|+.||| .++||||||||+|||+ ++.++++|
T Consensus 392 ~~v~e~l~g~ell~ri~~----------~~~~~-~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrl 457 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRS----------KPEFC-SEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRL 457 (612)
T ss_pred eeeehhccccHHHHHHHh----------cchhH-HHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEE
Confidence 999999999988877732 22233 677889999999999999 8999999999999999 69999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||.++..... ....+-|..|.|||++....|++++|+||||++||+|++|+.||.....+ .
T Consensus 458 tyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~----------- 520 (612)
T KOG0603|consen 458 TYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-I----------- 520 (612)
T ss_pred EEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-H-----------
Confidence 999999876543 22234688999999999999999999999999999999999999763322 1
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
++........+. ........+|+.+||+.||.+||+|.++..
T Consensus 521 ----ei~~~i~~~~~s---------------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 521 ----EIHTRIQMPKFS---------------------ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ----HHHHhhcCCccc---------------------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 111111001000 111234678999999999999999998753
No 383
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.96 E-value=7.7e-31 Score=270.33 Aligned_cols=255 Identities=24% Similarity=0.240 Sum_probs=190.8
Q ss_pred cceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEEEEE
Q 002857 164 SENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 164 ~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
.+..||.|+||+|++-.++..|+..|||+++.... .+.++++.|.+...+- +.||||+++|.+ ..++..++-|
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~-----F~EGdcWiCM 142 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGAL-----FSEGDCWICM 142 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhh-----hcCCceeeeH
Confidence 34789999999999999999999999999985544 4557788888875554 789999999996 3455689999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
|.|. .||+.+-+... ..+...+++.-.-.|..-.+.||.||-+ ...|||||+||+|||||..|.+||+|||+
T Consensus 143 ELMd-~SlDklYk~vy-----~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGI 214 (361)
T KOG1006|consen 143 ELMD-ISLDKLYKRVY-----SVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGI 214 (361)
T ss_pred HHHh-hhHHHHHHHHH-----HHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccc
Confidence 9995 47766543211 1345668888888999999999999986 67999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCC--CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 322 ARFLEATNEQTSSIGVKGTTGYIAPEYGMGH--ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 322 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
+-.+... ...+..+|-..|||||.+... .|+.+|||||||++|+|+.||+.||..... +-+++
T Consensus 215 cGqLv~S---iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s------------vfeql 279 (361)
T KOG1006|consen 215 CGQLVDS---IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS------------VFEQL 279 (361)
T ss_pred hHhHHHH---HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH------------HHHHH
Confidence 9765432 223345689999999988653 589999999999999999999999865211 00111
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..++. ++ |........-.+....+++++..||..|-.+||...++.+
T Consensus 280 ~~Vv~----gd-------------pp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 280 CQVVI----GD-------------PPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred HHHHc----CC-------------CCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 11111 11 1100001110112335889999999999999999998764
No 384
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.2e-30 Score=276.21 Aligned_cols=205 Identities=26% Similarity=0.413 Sum_probs=172.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeec--cCCcc-----hhHHHHHHHHHHhhhhccceeeeeeeeccccc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNF--LHHDA-----SKSFTVECEVMRNIIHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~--~~~~~-----~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~ 232 (873)
++|-.+++||+|||+.||+|.+....+.||||+-.. ...+. .+...+|..|-+.|+||.||++++++. .
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs----l 538 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS----L 538 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee----e
Confidence 456678999999999999999988899999998642 22222 244678999999999999999999974 3
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC---
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN--- 309 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd--- 309 (873)
+.+..|-|+||++|.+|+-||+ ..+.+++.+...|+.||+.||.||.+. +.+|||-||||.||||-
T Consensus 539 DtdsFCTVLEYceGNDLDFYLK----------QhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~Gt 607 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLK----------QHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGT 607 (775)
T ss_pred ccccceeeeeecCCCchhHHHH----------hhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCc
Confidence 4556799999999999999994 467799999999999999999999954 89999999999999995
Q ss_pred CCCCeEEecccccccccccccc-----ccccccccccccCCCcccCCC----CCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 310 DEMTACVADFGIARFLEATNEQ-----TSSIGVKGTTGYIAPEYGMGH----ETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 310 ~~~~vKLsDFGla~~~~~~~~~-----~~~~~~~Gt~~Y~APE~l~~~----~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
.-|.+||.|||++++++.+... ..+....||..|++||.+.-+ +++.|.||||.|||+|..+.|+.||..
T Consensus 608 acGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGh 686 (775)
T KOG1151|consen 608 ACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGH 686 (775)
T ss_pred ccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCC
Confidence 4578999999999998765432 123345699999999976543 578899999999999999999999976
No 385
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=3.1e-28 Score=283.06 Aligned_cols=218 Identities=20% Similarity=0.241 Sum_probs=158.0
Q ss_pred hhcCCCcceeecccCceEEEEEEEc----------------CCCcEEEEEEeeccCCcchh--------------HHHHH
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILF----------------EGAPAVAIKVFNFLHHDASK--------------SFTVE 207 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~----------------~~g~~VAVK~l~~~~~~~~~--------------~f~~E 207 (873)
..++|++.++||+|+||.||+|.+. ..++.||||+++.......+ .+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4678999999999999999999752 23567999998644332222 34457
Q ss_pred HHHHHhhhhccc-----eeeeeeeeccc---ccCCceEEEEEeecCCCChhhhcccccccc--------------cccCC
Q 002857 208 CEVMRNIIHRKI-----IKVVTACSRVD---YQGNDFKALVYEFMPNGSLEEWIHPITEED--------------KRHKA 265 (873)
Q Consensus 208 i~iL~~L~HpNI-----V~llg~c~~~~---~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~--------------~~~~~ 265 (873)
+.++.+++|.++ ++++++|.... ....+..+|||||+++|+|.++|+...... .....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777888876654 67788764321 112456899999999999999996421000 00011
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCC
Q 002857 266 PGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIA 345 (873)
Q Consensus 266 ~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~A 345 (873)
...+++..++.|+.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++........ ......+++.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeC
Confidence 234677889999999999999999 889999999999999999999999999999755332211 1112235789999
Q ss_pred CcccCCCCC----------------------CcchhhHhHHHHHHHHHhCCC-CCCc
Q 002857 346 PEYGMGHET----------------------SSYGDVYSFGILLLEMFTGLR-PSDD 379 (873)
Q Consensus 346 PE~l~~~~~----------------------s~ksDVwSfGvvL~ELlTGk~-Pf~~ 379 (873)
||.+..... ..+.||||+||+++||++|.. ||..
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~ 435 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVAN 435 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence 998754321 234699999999999999875 6643
No 386
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.6e-29 Score=269.58 Aligned_cols=201 Identities=26% Similarity=0.317 Sum_probs=171.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~ 235 (873)
.+|..+.+||+|+||.|.+|..+.+.+.+|||++++.- .+..+--+.|-++|... +-|.++++... ++.-+
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc-----FQTmD 423 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC-----FQTMD 423 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH-----hhhhh
Confidence 47889999999999999999988889999999997432 22333456677777766 56778888776 46677
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
.+++||||+.||+|--+|+ +-+.+.+....-+|..||-||-||| +++||.||||.+|||||.+|++|
T Consensus 424 RLyFVMEyvnGGDLMyhiQ----------Q~GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiK 490 (683)
T KOG0696|consen 424 RLYFVMEYVNGGDLMYHIQ----------QVGKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIK 490 (683)
T ss_pred heeeEEEEecCchhhhHHH----------HhcccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceE
Confidence 8999999999999998884 4567888899999999999999999 99999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
|+|||+++.--. ....+....||+.|+|||++...+|+...|.|||||+||||+.|++||++.
T Consensus 491 i~DFGmcKEni~--~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe 553 (683)
T KOG0696|consen 491 IADFGMCKENIF--DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 553 (683)
T ss_pred eeeccccccccc--CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence 999999984222 233445578999999999999999999999999999999999999999874
No 387
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.95 E-value=3.6e-28 Score=237.94 Aligned_cols=199 Identities=23% Similarity=0.336 Sum_probs=168.1
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|...++||+|.||+||+|+.+++++.||+|+++... ........+|+-+|+.++|+|||++++.. ..+...-
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvl-----hsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhh-----ccCceeE
Confidence 4566789999999999999999999999999987443 33346789999999999999999999983 4567789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
||+||+.. +|..+... -++.++......++.|+++||.|.| ++++.||||||.|.|++.+|+.||+|
T Consensus 78 lvfe~cdq-dlkkyfds---------lng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelklad 144 (292)
T KOG0662|consen 78 LVFEFCDQ-DLKKYFDS---------LNGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLAD 144 (292)
T ss_pred EeHHHhhH-HHHHHHHh---------cCCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecc
Confidence 99999955 88888742 4567888899999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHh-CCCCCCc
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFT-GLRPSDD 379 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~ 379 (873)
||+++.+.-.. ......+-|..|++|.++.+. -|++..|+||-|||+.|+.. |++.|.+
T Consensus 145 fglarafgipv--rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 145 FGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred cchhhhcCCce--EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 99999764322 222334579999999999886 47888999999999999997 6655655
No 388
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=9.5e-28 Score=264.39 Aligned_cols=137 Identities=20% Similarity=0.312 Sum_probs=118.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-----h---ccceeeeeeeeccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-----H---RKIIKVVTACSRVD 230 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-----H---pNIV~llg~c~~~~ 230 (873)
..+|.+.++||.|.|++||++.+..+.+.||+|+.+... .-.+..+.||++|++++ | .+||+|++.|....
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 368999999999999999999999999999999987443 23366788999999994 3 46999999986543
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
.++.+.++|+|++ |-+|..+|.. ...+.++...+.+|+.||+.||.|||.. -+|||.||||+|||+
T Consensus 156 -pNG~HVCMVfEvL-GdnLLklI~~--------s~YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 -PNGQHVCMVFEVL-GDNLLKLIKY--------SNYRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLL 221 (590)
T ss_pred -CCCcEEEEEehhh-hhHHHHHHHH--------hCCCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeee
Confidence 6788999999999 6699999853 4567899999999999999999999984 599999999999998
No 389
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.7e-28 Score=255.27 Aligned_cols=201 Identities=24% Similarity=0.316 Sum_probs=176.4
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~ 235 (873)
++|..+.+||+|+|++|.+++++++.+.+|+|++++. ..+..+..+.|-.+..+. +||.+|-+..+ ++.+.
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc-----fqtes 324 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC-----FQTES 324 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh-----hcccc
Confidence 6789999999999999999999999999999999743 333456677888888776 79999999887 57788
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
.+++|.||++||+|--+++ ....|++.....+...|..||.||| ++|||.||||..|||+|..|++|
T Consensus 325 rlffvieyv~ggdlmfhmq----------rqrklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghik 391 (593)
T KOG0695|consen 325 RLFFVIEYVNGGDLMFHMQ----------RQRKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIK 391 (593)
T ss_pred eEEEEEEEecCcceeeehh----------hhhcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCcee
Confidence 8999999999999987773 4667999999999999999999999 99999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
|.|||+.+.--.. ...+....||+.|+|||++.+..|....|.|++||+++||+.|+.||+-.
T Consensus 392 ltdygmcke~l~~--gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv 454 (593)
T KOG0695|consen 392 LTDYGMCKEGLGP--GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV 454 (593)
T ss_pred ecccchhhcCCCC--CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence 9999999853322 23344578999999999999999999999999999999999999999763
No 390
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=4.3e-28 Score=242.44 Aligned_cols=203 Identities=25% Similarity=0.312 Sum_probs=167.6
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc-CCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL-HHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~-~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+......||+|++|.|-+-++..+|...|+|.+... ..+..++.++|+.+..+- ..|.+|.++|.. ......+
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~-----~regdvw 121 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGAL-----FREGDVW 121 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhh-----hccccEE
Confidence 344557899999999999999999999999998743 334456788888876654 789999999973 5566789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+.||.|.- ||+.+-.. .......+++..+-+|+..|.+||.|||+ +..+||||+||+|||++.+|++||+|
T Consensus 122 IcME~M~t-Sldkfy~~------v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCD 192 (282)
T KOG0984|consen 122 ICMELMDT-SLDKFYRK------VLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICD 192 (282)
T ss_pred EeHHHhhh-hHHHHHHH------HHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcc
Confidence 99999954 88877643 23456778999999999999999999996 78999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCC----CCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG----HETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~----~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
||++-.+.... ..+...|--.|||||.+.. ..|+.||||||||+++.||.+++.||+..
T Consensus 193 FGIsG~L~dSi---Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 193 FGISGYLVDSI---AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred cccceeehhhh---HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 99998764432 2223458889999998764 37899999999999999999999999763
No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-28 Score=282.98 Aligned_cols=246 Identities=23% Similarity=0.364 Sum_probs=185.1
Q ss_pred CCcceeecccCce-EEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEEE
Q 002857 162 FSSENLIGAGNFA-SVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 162 f~~~~~LG~G~fG-~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
|...+++|.|..| .||+|.. .++.||||++- .+......+|+..|+.- +|||||++++. -.+..+.||
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll---~e~~~~A~rEi~lL~eSD~H~NviRyyc~-----E~d~qF~YI 580 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLL---EEFFDFAQREIQLLQESDEHPNVIRYYCS-----EQDRQFLYI 580 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHh---hHhHHHHHHHHHHHHhccCCCceEEEEee-----ccCCceEEE
Confidence 4455789999887 5899988 67899999874 22334678899999888 69999999887 366789999
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC---C--CCe
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND---E--MTA 314 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~---~--~~v 314 (873)
..|.|.. +|++++... .. ..........+.++.|++.||+||| +.+||||||||.||||+. + ..+
T Consensus 581 alELC~~-sL~dlie~~-~~-----d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra 650 (903)
T KOG1027|consen 581 ALELCAC-SLQDLIESS-GL-----DVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRA 650 (903)
T ss_pred EehHhhh-hHHHHHhcc-cc-----chhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeE
Confidence 9999965 999999642 00 1111111456788999999999999 899999999999999975 2 579
Q ss_pred EEecccccccccccccc-ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhC-CCCCCcccccchhhHHHHh
Q 002857 315 CVADFGIARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTG-LRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTG-k~Pf~~~~~~~~~l~~~~~ 392 (873)
+|+|||+++.+..+... .......||-+|+|||++....-+.+.||||||||+|+.++| .+||.+....+.++..-..
T Consensus 651 ~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~ 730 (903)
T KOG1027|consen 651 KISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNY 730 (903)
T ss_pred EecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCcc
Confidence 99999999988665432 223456699999999999999888999999999999999994 9999874433322211000
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
. +.. + .+. .++ +..+|+.+|++++|..||++.+|+
T Consensus 731 ~-----L~~-----L---------------~~~--------~d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 731 T-----LVH-----L---------------EPL--------PDC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred c-----eee-----e---------------ccC--------chH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 0 000 0 000 011 356899999999999999999997
No 392
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=1.6e-26 Score=232.61 Aligned_cols=211 Identities=28% Similarity=0.457 Sum_probs=179.3
Q ss_pred ecccCceEEEEEEEcCCCcEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeecCC
Q 002857 168 IGAGNFASVYKGILFEGAPAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFMPN 246 (873)
Q Consensus 168 LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~ 246 (873)
||+|.+|.||++....+++.+++|++...... ..+.+.+|++.++.++|++|+++++++ ......+++|||+.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF-----EDENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeee-----ecCCeEEEEEecCCC
Confidence 68999999999999777899999998754332 346799999999999999999999995 334678999999999
Q ss_pred CChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC-CCCeEEecccccccc
Q 002857 247 GSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND-EMTACVADFGIARFL 325 (873)
Q Consensus 247 GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~-~~~vKLsDFGla~~~ 325 (873)
++|.+++.. ....+++..++.++.+++++|+||| +.+++|+||+|.||+++. ++.++|+|||.+...
T Consensus 76 ~~l~~~~~~---------~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~ 143 (215)
T cd00180 76 GSLKDLLKE---------NEGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLL 143 (215)
T ss_pred CcHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEc
Confidence 999999843 1146889999999999999999999 889999999999999999 899999999999865
Q ss_pred ccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhh
Q 002857 326 EATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVD 404 (873)
Q Consensus 326 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid 404 (873)
..... ......+...|++||.+... ..+.++|+|++|+++++|
T Consensus 144 ~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------- 187 (215)
T cd00180 144 TSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------- 187 (215)
T ss_pred cCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------
Confidence 43321 12234478899999998877 888999999999999999
Q ss_pred hhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 405 TLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 405 ~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
..+.+++..|++.+|++||++.++++.
T Consensus 188 ---------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ---------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ---------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 025678999999999999999998864
No 393
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.5e-28 Score=253.59 Aligned_cols=285 Identities=19% Similarity=0.210 Sum_probs=197.4
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
.+..+.||-|+||.||..++..+|+.||+|.+...- -...+.+.+|+++|..++|.|++..+++-......--.+.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 345688999999999999999999999999885322 223477899999999999999999988743211111124678
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
|+|.|.. +|.++| .....|+...+.-++.||++||.||| +.+|.||||||.|.|++.+...||+||
T Consensus 135 ~TELmQS-DLHKII----------VSPQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDF 200 (449)
T KOG0664|consen 135 LTELMQS-DLHKII----------VSPQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDF 200 (449)
T ss_pred HHHHHHh-hhhhee----------ccCCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEeccc
Confidence 8898854 888877 35677888899999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch-
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE- 397 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~- 397 (873)
|+++..+.+..... +..+-|..|+|||++++. .|+.+.||||.|||+.||+..+..|..... ....+.+...+..
T Consensus 201 GLARvee~d~~~hM-TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P--iqQL~lItdLLGTP 277 (449)
T KOG0664|consen 201 GLARTWDQRDRLNM-THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP--IEQLQMIIDLLGTP 277 (449)
T ss_pred ccccccchhhhhhh-HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh--HHHHHHHHHHhCCC
Confidence 99997655443333 334568899999999986 689999999999999999999888865321 1112222222222
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHH--HHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIIL--ECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~--e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
.++++ ...-.+. +.-......+.|.......... ..-.+.+.+...++..||.+|.+..+.+..+.
T Consensus 278 s~EaM-r~ACEGA--k~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 278 SQEAM-KYACEGA--KNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred cHHHH-HHHhhhh--HHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 11111 1100000 0000011122222221111110 11123556777889999999999888766543
No 394
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=3.2e-27 Score=239.08 Aligned_cols=278 Identities=17% Similarity=0.254 Sum_probs=199.2
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-hccceeeeeeeecccccCCce
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~ 236 (873)
..++|++.+++|+|.++.||.|....+.+.++||+++.. ..+.+.+|++||..|. ||||++++++..+ .....
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~D---p~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKD---PESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcC---ccccC
Confidence 457899999999999999999998889999999999743 3467899999999997 9999999998543 34556
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC-CCCeE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND-EMTAC 315 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~-~~~vK 315 (873)
..||+||+.+.+...+- ..|+...+...+.++++||.|.| +.||+|||+||+|+++|. .-..+
T Consensus 110 paLiFE~v~n~Dfk~ly-------------~tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLr 173 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY-------------PTLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLR 173 (338)
T ss_pred chhHhhhhccccHHHHh-------------hhhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceee
Confidence 88999999997777654 34677788999999999999999 999999999999999995 45799
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|+|+|.++........ .+.+..|.-||.+... .|+..-|+|||||++..|+..+.||-........+.+.+.-.
T Consensus 174 lIDWGLAEFYHp~~eYnV---RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVL 250 (338)
T KOG0668|consen 174 LIDWGLAEFYHPGKEYNV---RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVL 250 (338)
T ss_pred eeecchHhhcCCCceeee---eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHh
Confidence 999999998866543332 2356778899998775 578888999999999999999999865433333333333222
Q ss_pred CchhHHHHhhhh-hhhhhhHHHHHhhhccCCCCc----hhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTL-FFKEIEEEETVYKYKKAPSSS----TQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~-L~~~~~~r~~~~~i~~~p~~~----~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
-...+...++.- +.-++.-...+.....-+|.. ...... ..+.++++...|..|-++|+|+.|.+.
T Consensus 251 Gt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~---~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 251 GTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLV---SPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred ChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccC---ChHHHHHHHHHHhhccccccchHHHhc
Confidence 222222221111 000000000000001111110 000000 134678999999999999999998764
No 395
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=6.1e-26 Score=233.70 Aligned_cols=199 Identities=30% Similarity=0.444 Sum_probs=170.1
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
|.+.+.||.|++|.||++....+++.+|+|.+...... ..+.+.+|++.+.+++|+|++++++++ ......+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVF-----EDPEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeee-----ecCCceEEE
Confidence 56778999999999999999877899999999765444 567899999999999999999999985 344678999
Q ss_pred EeecCCCChhhhcccccccccccCCCCC-CchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGN-LNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~-Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
+||+++++|.+++.. ... +++..+..++.+++.+|.||| ..+++|+||+++||+++.++.++|+||
T Consensus 76 ~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~ 142 (225)
T smart00221 76 MEYCEGGDLFDYLRK----------KGGKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADF 142 (225)
T ss_pred EeccCCCCHHHHHHh----------cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeC
Confidence 999999999999853 122 788999999999999999999 789999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCccc-CCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYG-MGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l-~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|.+......... ......++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 143 g~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 143 GLARFIHRDLAA-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ceeeEecCcccc-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 999876443211 12234577889999998 666788899999999999999999999955
No 396
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.6e-27 Score=262.80 Aligned_cols=246 Identities=20% Similarity=0.293 Sum_probs=197.8
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
+++....||-|+||.|=++........+|+|++++.+ ....+.+..|-.||...+.+.||++|-. |.+..+.
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrT-----frd~kyv 495 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRT-----FRDSKYV 495 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHH-----hccchhh
Confidence 4455678999999999999886555568999887543 3344668889999999999999999988 4667789
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
|++||-|-||.|...|+ ..+.++..+...++..+.+|++||| .++||.|||||+|.|||.+|-+||.
T Consensus 496 YmLmEaClGGElWTiLr----------dRg~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLV 562 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILR----------DRGSFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLV 562 (732)
T ss_pred hhhHHhhcCchhhhhhh----------hcCCcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEe
Confidence 99999999999999994 4677888999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccch------hhHHHH
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNL------NLQNWV 391 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~------~l~~~~ 391 (873)
|||+|+.+.... .+....||+.|.|||++.+...+...|.||||+++|||+||.+||.....-.. .+..|.
T Consensus 563 DFGFAKki~~g~---KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~ 639 (732)
T KOG0614|consen 563 DFGFAKKIGSGR---KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIE 639 (732)
T ss_pred ehhhHHHhccCC---ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhh
Confidence 999999875533 33456899999999999999999999999999999999999999986322110 111111
Q ss_pred -hhcCchhHHHHhhhhhhhhhhHHHH-----HhhhccCCCCc
Q 002857 392 -QSALPERVEEIVDTLFFKEIEEEET-----VYKYKKAPSSS 427 (873)
Q Consensus 392 -~~~~~~~l~elid~~L~~~~~~r~~-----~~~i~~~p~~~ 427 (873)
...+.....+++...-..++.+|.. +.++++|.|..
T Consensus 640 ~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~ 681 (732)
T KOG0614|consen 640 FPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFE 681 (732)
T ss_pred cccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhh
Confidence 2334446677777777777777655 45667776643
No 397
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=8.1e-27 Score=261.81 Aligned_cols=204 Identities=22% Similarity=0.325 Sum_probs=172.2
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.-|..++.||-|+||.|.++.-.++...+|+|.+++.+ .........|-.||...+.+=||+|+-. |++.+.
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS-----FQDkdn 703 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS-----FQDKDN 703 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE-----eccCCc
Confidence 45778899999999999999888888889999987432 2334567889999999999999999877 578889
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
+|+||+|++||++-.+|- ..+.+.+.....++..+..|+++.| +.|+|||||||+|||||.+|++||
T Consensus 704 LYFVMdYIPGGDmMSLLI----------rmgIFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKL 770 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLI----------RMGIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKL 770 (1034)
T ss_pred eEEEEeccCCccHHHHHH----------HhccCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceee
Confidence 999999999999999983 4567888888889999999999999 999999999999999999999999
Q ss_pred ecccccccc---------cccccc-------------------------------ccccccccccccCCCcccCCCCCCc
Q 002857 317 ADFGIARFL---------EATNEQ-------------------------------TSSIGVKGTTGYIAPEYGMGHETSS 356 (873)
Q Consensus 317 sDFGla~~~---------~~~~~~-------------------------------~~~~~~~Gt~~Y~APE~l~~~~~s~ 356 (873)
.|||++.-+ ...+.. ......+||..|+|||++....++.
T Consensus 771 TDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q 850 (1034)
T KOG0608|consen 771 TDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQ 850 (1034)
T ss_pred eeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccc
Confidence 999997532 111100 0012346999999999999999999
Q ss_pred chhhHhHHHHHHHHHhCCCCCCccc
Q 002857 357 YGDVYSFGILLLEMFTGLRPSDDMF 381 (873)
Q Consensus 357 ksDVwSfGvvL~ELlTGk~Pf~~~~ 381 (873)
-+|.||.|||||||+.|+.||-...
T Consensus 851 ~cdwws~gvil~em~~g~~pf~~~t 875 (1034)
T KOG0608|consen 851 LCDWWSVGVILYEMLVGQPPFLADT 875 (1034)
T ss_pred cchhhHhhHHHHHHhhCCCCccCCC
Confidence 9999999999999999999997643
No 398
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.93 E-value=1.1e-26 Score=259.75 Aligned_cols=198 Identities=23% Similarity=0.302 Sum_probs=169.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--------cchhHHHHHHHHHHhhh---hccceeeeeeee
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--------DASKSFTVECEVMRNII---HRKIIKVVTACS 227 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--------~~~~~f~~Ei~iL~~L~---HpNIV~llg~c~ 227 (873)
..+|+..+.||.|+||.|++|+++.+...|+||.+.+..- ......-.||+||..++ |+||++++.+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf-- 637 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF-- 637 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe--
Confidence 3468889999999999999999999999999998864321 11123567999999997 9999999999
Q ss_pred cccccCCceEEEEEeecC-CCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCe
Q 002857 228 RVDYQGNDFKALVYEFMP-NGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNI 306 (873)
Q Consensus 228 ~~~~~~~~~~~LV~Ey~~-~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNI 306 (873)
|+++++.+|+||-.. +.+|.++|. ....+++.+...|+.||+-|+++|| +++|||||||-+||
T Consensus 638 ---FEddd~yyl~te~hg~gIDLFd~IE----------~kp~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenv 701 (772)
T KOG1152|consen 638 ---FEDDDYYYLETEVHGEGIDLFDFIE----------FKPRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENV 701 (772)
T ss_pred ---eecCCeeEEEecCCCCCcchhhhhh----------ccCccchHHHHHHHHHHHhcccccc---ccCceecccccccE
Confidence 477889999999763 558999993 4677999999999999999999999 99999999999999
Q ss_pred eeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCC-cchhhHhHHHHHHHHHhCCCCCC
Q 002857 307 LLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETS-SYGDVYSFGILLLEMFTGLRPSD 378 (873)
Q Consensus 307 LLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s-~ksDVwSfGvvL~ELlTGk~Pf~ 378 (873)
.++.+|-+||+|||.|.....+. ....+||..|.|||++.+.+|- ..-|||++|++||.++....||.
T Consensus 702 ivd~~g~~klidfgsaa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 702 IVDSNGFVKLIDFGSAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred EEecCCeEEEeeccchhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99999999999999998654332 2345799999999999998874 44799999999999999998875
No 399
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=1.5e-25 Score=244.66 Aligned_cols=285 Identities=24% Similarity=0.287 Sum_probs=201.3
Q ss_pred HHhhcCCCcceeecccCceEEEEEEEcC---CCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecccc
Q 002857 156 YSATKGFSSENLIGAGNFASVYKGILFE---GAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDY 231 (873)
Q Consensus 156 ~~at~~f~~~~~LG~G~fG~VYkg~~~~---~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~ 231 (873)
....+.|...++||+|.|++||++++.. ..+.||+|.+.... ....+.+|+++|..+ -+.||+++.++ +
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~-----~ 104 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGC-----F 104 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhh-----h
Confidence 3455678899999999999999999877 67899999986443 335789999999999 58999999998 4
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC-
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND- 310 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~- 310 (873)
..++...+|+||+++-...+++.. ++...+..+++.+..||+++| ..|||||||||+|+|.+.
T Consensus 105 rnnd~v~ivlp~~~H~~f~~l~~~-------------l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~ 168 (418)
T KOG1167|consen 105 RNNDQVAIVLPYFEHDRFRDLYRS-------------LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRR 168 (418)
T ss_pred ccCCeeEEEecccCccCHHHHHhc-------------CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccc
Confidence 678889999999999888888743 667789999999999999999 999999999999999984
Q ss_pred CCCeEEecccccccccccc-------------cc-----------------------------ccccccccccccCCCcc
Q 002857 311 EMTACVADFGIARFLEATN-------------EQ-----------------------------TSSIGVKGTTGYIAPEY 348 (873)
Q Consensus 311 ~~~vKLsDFGla~~~~~~~-------------~~-----------------------------~~~~~~~Gt~~Y~APE~ 348 (873)
.+.-.|.|||+|...+... .. .......||++|+|||+
T Consensus 169 t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEv 248 (418)
T KOG1167|consen 169 TQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEV 248 (418)
T ss_pred cCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHH
Confidence 4678999999997321110 00 00012359999999999
Q ss_pred cCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh---HHHHhhh--hhh-hh----hhHHHHH
Q 002857 349 GMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER---VEEIVDT--LFF-KE----IEEEETV 417 (873)
Q Consensus 349 l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~---l~elid~--~L~-~~----~~~r~~~ 417 (873)
+... ..++++||||-|||++-+++++.||-....+-..+.+.+...-... ...+.+. .+. .+ ...+...
T Consensus 249 L~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f 328 (418)
T KOG1167|consen 249 LFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNF 328 (418)
T ss_pred HhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhch
Confidence 8764 5789999999999999999999998765555444444432222211 1111111 000 00 0000000
Q ss_pred -----hhhccCCCCchhHHHHHHH-HHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 418 -----YKYKKAPSSSTQRSIILEC-LNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 418 -----~~i~~~p~~~~~~~~~~e~-~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+.+............++ ...+++++.+|+..||.+|.|++|.+.
T Consensus 329 ~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 329 ETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred hccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 0011101100011111122 226889999999999999999998764
No 400
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.92 E-value=1.8e-25 Score=247.14 Aligned_cols=206 Identities=23% Similarity=0.255 Sum_probs=173.2
Q ss_pred HHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh------hccceeeeeeeecc
Q 002857 156 YSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII------HRKIIKVVTACSRV 229 (873)
Q Consensus 156 ~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~------HpNIV~llg~c~~~ 229 (873)
+....+|.+....|+|-|++|.+|.+...+..||||++.... ...+.=+.|++||++|+ --|+++|+-.
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~---- 502 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRH---- 502 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHH----
Confidence 345678999999999999999999998888999999997542 22355678999999995 3578888776
Q ss_pred cccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
|...+++|||+|-+ ..+|.++|+. ...+..|....+..++.|+.-||..|- .-+|+|.||||.|||++
T Consensus 503 -F~hknHLClVFE~L-slNLRevLKK-------yG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVN 570 (752)
T KOG0670|consen 503 -FKHKNHLCLVFEPL-SLNLREVLKK-------YGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVN 570 (752)
T ss_pred -hhhcceeEEEehhh-hchHHHHHHH-------hCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEec
Confidence 46678999999988 5599999964 355677889999999999999999999 89999999999999998
Q ss_pred CC-CCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccc
Q 002857 310 DE-MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFK 382 (873)
Q Consensus 310 ~~-~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~ 382 (873)
+. ..+||+|||.|....... .+.+.-+..|.|||++.|-.|+...|+||.||+||||.||+..|.+..+
T Consensus 571 E~k~iLKLCDfGSA~~~~ene----itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN 640 (752)
T KOG0670|consen 571 ESKNILKLCDFGSASFASENE----ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN 640 (752)
T ss_pred cCcceeeeccCcccccccccc----ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCc
Confidence 65 578999999998664332 2223456789999999999999999999999999999999999987544
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.92 E-value=4.8e-26 Score=258.17 Aligned_cols=254 Identities=23% Similarity=0.301 Sum_probs=200.4
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|.....+|.|.||.|||+++...++..|+|+++........-.++|+-+++..+|+|||.++|.+ ...+..+
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsy-----lr~dklw 88 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSY-----LRRDKLW 88 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhh-----hhhcCcE
Confidence 45788899999999999999999999999999999988888888899999999999999999999985 4566789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+.|||+.+|+|++.-+ ....+++.++..+++..++||+||| +.+-+|||||-.|||+++.+.+|++|
T Consensus 89 icMEycgggslQdiy~----------~TgplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaD 155 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYH----------VTGPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLAD 155 (829)
T ss_pred EEEEecCCCcccceee----------ecccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecc
Confidence 9999999999999874 3678999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccC---CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGM---GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
||.+-.+.... .......||+.|||||+.. .+.|..++|||+.|+...|+---+.|-.+....
T Consensus 156 fgvsaqitati--~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm------------ 221 (829)
T KOG0576|consen 156 FGVSAQITATI--AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM------------ 221 (829)
T ss_pred cCchhhhhhhh--hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH------------
Confidence 99987654322 2223457999999999753 467899999999999999998877774331110
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+..-+......+ +|.......+ .+.+-++++.|+-.+|++|||+..++.
T Consensus 222 --r~l~LmTkS~~q-------------pp~lkDk~kw----s~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 222 --RALFLMTKSGFQ-------------PPTLKDKTKW----SEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred --HHHHHhhccCCC-------------CCcccCCccc----hHHHHHHHHHHhcCCCccCCChhhhee
Confidence 011111111000 0000000011 123678999999999999999987653
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=5.9e-25 Score=227.52 Aligned_cols=255 Identities=20% Similarity=0.266 Sum_probs=187.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+.|.+.+.||+|.||.+-++.+++..+.+|+|-+... ....++|.+|..---.| .|.||+.-+..- |+..+...
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d~Yv 98 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSDAYV 98 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHH----hhcCceEE
Confidence 4588899999999999999999999999999988633 33457888888654445 589999987763 67778899
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC--CCCCeEE
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN--DEMTACV 316 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd--~~~~vKL 316 (873)
+++||++.|+|.+-+. ...+-+.....++.|++.||.||| +.++||||||.+||||- +...+||
T Consensus 99 F~qE~aP~gdL~snv~-----------~~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKl 164 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVE-----------AAGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKL 164 (378)
T ss_pred EeeccCccchhhhhcC-----------cccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEe
Confidence 9999999999998773 355777788999999999999999 99999999999999994 4458999
Q ss_pred eccccccccccccccccccccccccccCCCcccCC---C--CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHH
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG---H--ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWV 391 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~---~--~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~ 391 (873)
+|||+.+..... ......+..|.+||.... + ...+.+|||.||++++.++||+.||+...-.+..+..|.
T Consensus 165 cDFG~t~k~g~t-----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~ 239 (378)
T KOG1345|consen 165 CDFGLTRKVGTT-----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWE 239 (378)
T ss_pred eecccccccCce-----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHH
Confidence 999999754322 122335678999997543 2 356779999999999999999999986444444444433
Q ss_pred hhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 392 QSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 392 ~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
.-.-.. .+.+.+.+ ......+.++..+-+..++++|=-..++..+-.
T Consensus 240 ~w~~rk------~~~~P~~F----------------------~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk 286 (378)
T KOG1345|consen 240 QWLKRK------NPALPKKF----------------------NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRK 286 (378)
T ss_pred HHhccc------CccCchhh----------------------cccCHHHHHHHHHhcCCcccccchhHHHHHHHH
Confidence 211000 00010000 001224667788889999999955555555443
No 403
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.91 E-value=2.8e-25 Score=234.92 Aligned_cols=201 Identities=25% Similarity=0.269 Sum_probs=166.3
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeec--cCCcchhHHHHHHHHHHhhhhccceeeeeeeecccc-cCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNF--LHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY-QGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~--~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~-~~~~ 235 (873)
..+|.....+|.|.- .|-.|.+.-.++.||+|.+.. ......++..+|..++..++|+||++++.++..... ..-.
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 456777888999988 777887777889999998752 233445778999999999999999999998753321 1223
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++|||+|. ++|.+.++ -.++-.++..|+.|++.|++||| +.+|+||||||+||++..+..+|
T Consensus 95 e~y~v~e~m~-~nl~~vi~------------~elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lK 158 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVIL------------MELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLK 158 (369)
T ss_pred hHHHHHHhhh-hHHHHHHH------------HhcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhhee
Confidence 5799999995 58988874 23566788999999999999999 99999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|.|||+|+.-... ...+..+.|..|+|||++.+..+.+..||||.||++.||++|+..|.+
T Consensus 159 i~dfg~ar~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g 219 (369)
T KOG0665|consen 159 ILDFGLARTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG 219 (369)
T ss_pred eccchhhcccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC
Confidence 9999999854322 234456789999999999999999999999999999999999988874
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=1e-23 Score=211.52 Aligned_cols=171 Identities=22% Similarity=0.246 Sum_probs=125.5
Q ss_pred CChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccccc
Q 002857 247 GSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLE 326 (873)
Q Consensus 247 GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~ 326 (873)
|+|.++++. ....+++.+++.|+.||+.||+||| +.+ ||+|||++.++.+|+ ||+++...
T Consensus 1 GsL~~~l~~---------~~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~ 60 (176)
T smart00750 1 VSLADILEV---------RGRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKT 60 (176)
T ss_pred CcHHHHHHH---------hCCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeec
Confidence 688888842 2456999999999999999999999 555 999999999999999 99998654
Q ss_pred cccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhh
Q 002857 327 ATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTL 406 (873)
Q Consensus 327 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~ 406 (873)
... ..||..|+|||++.+..++.++|||||||++|||+||+.||........ .+..++...
T Consensus 61 ~~~-------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~------------~~~~~~~~~ 121 (176)
T smart00750 61 PEQ-------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA------------ILEILLNGM 121 (176)
T ss_pred ccc-------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH------------HHHHHHHHh
Confidence 321 2588999999999999999999999999999999999999865321111 111111111
Q ss_pred hhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 407 FFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 407 L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
.......+ .. .....+ ...+.+++.+||+.+|++||++.|+++.+..+..
T Consensus 122 ~~~~~~~~------------~~-~~~~~~-~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 122 PADDPRDR------------SN-LESVSA-ARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred ccCCcccc------------cc-HHHHHh-hhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 11100000 00 000000 1258899999999999999999999999987654
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=6.8e-24 Score=261.95 Aligned_cols=154 Identities=19% Similarity=0.344 Sum_probs=115.5
Q ss_pred Hhhhh-ccceeeeeeeecccc--cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHH
Q 002857 212 RNIIH-RKIIKVVTACSRVDY--QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYL 288 (873)
Q Consensus 212 ~~L~H-pNIV~llg~c~~~~~--~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yL 288 (873)
+.++| .||++++++|..... ......++++||+ +++|.++|.. ....+++.+++.|+.||++||+||
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~l 96 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN---------PDRSVDAFECFHVFRQIVEIVNAA 96 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc---------ccccccHHHHHHHHHHHHHHHHHH
Confidence 34566 688888888632211 1223567788887 6699999942 235689999999999999999999
Q ss_pred hhCCCCCeeeccCCCCCeeeCC-------------------CCCeEEeccccccccccccc--------------ccccc
Q 002857 289 HLGCKPPIAHCDIKPSNILLND-------------------EMTACVADFGIARFLEATNE--------------QTSSI 335 (873)
Q Consensus 289 H~~~s~gIvHrDLKpsNILLd~-------------------~~~vKLsDFGla~~~~~~~~--------------~~~~~ 335 (873)
| +++|+||||||+||||+. ++.+||+|||+++....... .....
T Consensus 97 H---~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (793)
T PLN00181 97 H---SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQI 173 (793)
T ss_pred H---hCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCccccc
Confidence 9 899999999999999954 45566777777654211000 00011
Q ss_pred ccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCC
Q 002857 336 GVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSD 378 (873)
Q Consensus 336 ~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~ 378 (873)
...||+.|||||++.+..++.++|||||||+||||++|..|+.
T Consensus 174 ~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~ 216 (793)
T PLN00181 174 LAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSRE 216 (793)
T ss_pred ccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchh
Confidence 1347888999999999999999999999999999999988764
No 406
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=5.9e-22 Score=221.94 Aligned_cols=178 Identities=19% Similarity=0.170 Sum_probs=135.3
Q ss_pred HHhhcCCCcceeecccCceEEEEEEEcC-CCcEEEEEEeeccC-----CcchhHHHHHHHHHHhhhhccceeeeeeeecc
Q 002857 156 YSATKGFSSENLIGAGNFASVYKGILFE-GAPAVAIKVFNFLH-----HDASKSFTVECEVMRNIIHRKIIKVVTACSRV 229 (873)
Q Consensus 156 ~~at~~f~~~~~LG~G~fG~VYkg~~~~-~g~~VAVK~l~~~~-----~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~ 229 (873)
.....+|.+.+.||+|+||+||+|.+.. +++.||||++.... ....+.|.+|+++|++++|+|++..+...
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 3445789999999999999999998875 67788999875321 12245689999999999999999643321
Q ss_pred cccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccC-CCCCeee
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDI-KPSNILL 308 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDL-KpsNILL 308 (873)
+..+|||||+++++|.... . .. ...++.++++||.||| +.+|+|||| ||+|||+
T Consensus 91 -----~~~~LVmE~~~G~~L~~~~-~----------~~------~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv 145 (365)
T PRK09188 91 -----GKDGLVRGWTEGVPLHLAR-P----------HG------DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLM 145 (365)
T ss_pred -----CCcEEEEEccCCCCHHHhC-c----------cc------hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEE
Confidence 2469999999999996321 0 00 1467899999999999 899999999 9999999
Q ss_pred CCCCCeEEecccccccccccccccc------ccccccccccCCCcccCCCC------CCcchhhH
Q 002857 309 NDEMTACVADFGIARFLEATNEQTS------SIGVKGTTGYIAPEYGMGHE------TSSYGDVY 361 (873)
Q Consensus 309 d~~~~vKLsDFGla~~~~~~~~~~~------~~~~~Gt~~Y~APE~l~~~~------~s~ksDVw 361 (873)
+.++.+||+|||+++.+........ .....+++.|+|||++...+ .+..+|-|
T Consensus 146 ~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 146 GPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred cCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 9999999999999997654331111 13456889999999987543 23346666
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=4.7e-20 Score=204.62 Aligned_cols=264 Identities=22% Similarity=0.252 Sum_probs=193.4
Q ss_pred CCCcceeecccCceEEEEEEEcCCC-cEEEEEEeeccCCcchhHHHHHHHHHHhhhh----ccceeeeeeeecccccCCc
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGA-PAVAIKVFNFLHHDASKSFTVECEVMRNIIH----RKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g-~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~H----pNIV~llg~c~~~~~~~~~ 235 (873)
+|.+.++||+|+||.||++....++ ..+|+|.-..........+..|+.++..+.+ +++..++.... ..+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 8999999999999999999986653 6789998765433333378889999999973 57888877621 3566
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC----
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE---- 311 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~---- 311 (873)
+.++||+.+ |.+|.++... .....++..+.+.|+.|++.+|.+|| +.|++||||||.|+++...
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~--------~~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~ 162 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKR--------NPPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSE 162 (322)
T ss_pred eeEEEEecc-CccHHHHHHh--------CCCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcc
Confidence 789999988 7799998743 22578999999999999999999999 9999999999999999854
Q ss_pred -CCeEEeccccccccc--ccccc----c-c-ccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccc
Q 002857 312 -MTACVADFGIARFLE--ATNEQ----T-S-SIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFK 382 (873)
Q Consensus 312 -~~vKLsDFGla~~~~--~~~~~----~-~-~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~ 382 (873)
..+.|.|||+++.+. ..... . . .....||..|.++....+...+.+.|+||++.++.|++.|..||.....
T Consensus 163 ~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~ 242 (322)
T KOG1164|consen 163 VRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEM 242 (322)
T ss_pred cceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence 469999999998322 22111 1 1 2235699999999999999999999999999999999999999865322
Q ss_pred cchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 383 DNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 383 ~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
... ... +........... ... ..+..+.++...+-..+..++|....+.
T Consensus 243 ~~~-~~~---------~~~~~~~~~~~~------------~~~---------~~~~~~~~~~~~~~~~~~~~~Pdy~~~~ 291 (322)
T KOG1164|consen 243 TDL-KSK---------FEKDPRKLLTDR------------FGD---------LKPEEFAKILEYIDSLDYEDKPDYEKLA 291 (322)
T ss_pred cch-HHH---------HHHHhhhhcccc------------ccC---------CChHHHHHHHHHhhccCCcCCCCHHHHH
Confidence 110 000 000000000000 000 0122355566666668999999999999
Q ss_pred HHHHHHHHh
Q 002857 463 LGLRLIKKK 471 (873)
Q Consensus 463 ~~Le~i~~~ 471 (873)
..|+.....
T Consensus 292 ~~l~~~~~~ 300 (322)
T KOG1164|consen 292 ELLKDVFDS 300 (322)
T ss_pred HHHHHHHHh
Confidence 998876544
No 408
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.85 E-value=7.7e-20 Score=193.65 Aligned_cols=260 Identities=28% Similarity=0.380 Sum_probs=191.3
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc---chhHHHHHHHHHHhhhhc-cceeeeeeeecccccCCceE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD---ASKSFTVECEVMRNIIHR-KIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~---~~~~f~~Ei~iL~~L~Hp-NIV~llg~c~~~~~~~~~~~ 237 (873)
|.....||.|+||.||++.+. ..+++|.+...... ....+.+|+.+++.+.|+ +++++...+ ......
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF-----QDEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEE-----ecCCEE
Confidence 667889999999999999885 78999998744333 357899999999999988 799999985 334447
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC-CeEE
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM-TACV 316 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~-~vKL 316 (873)
+++++++.+++|.+++.... .. ..+.......++.|++.++.|+| ..+++|||+||+||+++... .+++
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l 143 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIG------RK-GPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKL 143 (384)
T ss_pred EEEEecCCCCcHHHHHHhcc------cc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEE
Confidence 99999999999997764200 00 36888899999999999999999 88999999999999999888 7999
Q ss_pred eccccccccccccccc----cccccccccccCCCcccCC---CCCCcchhhHhHHHHHHHHHhCCCCCCccccc--chhh
Q 002857 317 ADFGIARFLEATNEQT----SSIGVKGTTGYIAPEYGMG---HETSSYGDVYSFGILLLEMFTGLRPSDDMFKD--NLNL 387 (873)
Q Consensus 317 sDFGla~~~~~~~~~~----~~~~~~Gt~~Y~APE~l~~---~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~--~~~l 387 (873)
.|||.++.+....... ......|+..|+|||.+.+ .......|+||+|++++++++|..||...... ....
T Consensus 144 ~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~ 223 (384)
T COG0515 144 IDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQT 223 (384)
T ss_pred eccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHH
Confidence 9999998554433221 2345679999999999987 57888999999999999999999997653221 0011
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
...+...... ..... ...... ......+.+++..++..+|..|.++.+....
T Consensus 224 ~~~~~~~~~~--------~~~~~--------------~~~~~~---~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 224 LKIILELPTP--------SLASP--------------LSPSNP---ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHHHhcCCc--------ccccc--------------cCcccc---chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1111000000 00000 000000 0112346788999999999999999987665
No 409
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.84 E-value=6.3e-22 Score=204.72 Aligned_cols=247 Identities=20% Similarity=0.327 Sum_probs=183.1
Q ss_pred cceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEE
Q 002857 164 SENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 164 ~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
...+|.+...|..|+|+|.. ..+++|+++.. .....++|..|.-.|+-+.||||+.++|.|. ......+|.
T Consensus 194 l~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacn-----sppnlv~is 266 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACN-----SPPNLVIIS 266 (448)
T ss_pred hhhhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhcc-----CCCCceEee
Confidence 34678889999999999944 35777887632 2333478999999999999999999999984 456789999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe--cc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA--DF 319 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs--DF 319 (873)
.||+.|+|+..|++ ......+..+..+++.+||+|++|||+- .+-|..--|.+..|++|++.+++|+ |-
T Consensus 267 q~mp~gslynvlhe--------~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~ 337 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHE--------QTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADT 337 (448)
T ss_pred eeccchHHHHHHhc--------CccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccc
Confidence 99999999999986 4455678889999999999999999942 4555566799999999999999885 32
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCC---CcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET---SSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~---s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
-++. ......-.+.||+||.++..+- -..+|+|||++++|||.|...||.+...-+......+
T Consensus 338 kfsf---------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial----- 403 (448)
T KOG0195|consen 338 KFSF---------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL----- 403 (448)
T ss_pred eeee---------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh-----
Confidence 2221 1112234678999999887643 4568999999999999999999987433221111000
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
+-+...+ +|- ....+.+++.-|+++||.+||.+..|+-.|++++
T Consensus 404 ----eglrv~i---------------ppg----------is~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 404 ----EGLRVHI---------------PPG----------ISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ----ccccccC---------------CCC----------ccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 0000000 010 1224778999999999999999999999998763
No 410
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=2.8e-20 Score=220.98 Aligned_cols=254 Identities=22% Similarity=0.236 Sum_probs=184.1
Q ss_pred cceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcc----hhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 164 SENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDA----SKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 164 ~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~----~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
...++|.|.+|.|+........+..+.|.+... .... ...+..|+-+-..+.|+|++..+..+. +....
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~-----~~~~~ 396 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQ-----EIDGI 396 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHh-----hcccc
Confidence 467899999998888877666666666654311 1111 122555777777889999988777643 22233
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
.-+|||+++ +|..++.. ...+...++-.++.|+..|+.||| ..||.|||||++|++++.++.+||+
T Consensus 397 ~~~mE~~~~-Dlf~~~~~----------~~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~ 462 (601)
T KOG0590|consen 397 LQSMEYCPY-DLFSLVMS----------NGKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKII 462 (601)
T ss_pred hhhhhcccH-HHHHHHhc----------ccccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEe
Confidence 344999999 99999842 346788889999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccc--ccccccccccccCCCcccCCCCCCcc-hhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 318 DFGIARFLEATNEQ--TSSIGVKGTTGYIAPEYGMGHETSSY-GDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 318 DFGla~~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~~~~s~k-sDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|||.+..+...... .......|+-.|+|||++.+..|.+. .||||.|+++..|++|+.||......+..+
T Consensus 463 Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~------- 535 (601)
T KOG0590|consen 463 DFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF------- 535 (601)
T ss_pred ecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-------
Confidence 99999876554443 45556789999999999999998776 799999999999999999997643332211
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+.....-... .+ .........+.+...++.++|+.+|.+|-|+.+|++
T Consensus 536 -----~~~~~~~~~~~-----------~~----~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 536 -----KTNNYSDQRNI-----------FE----GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred -----hhhcccccccc-----------cc----ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00000000000 00 001112233445677999999999999999999875
No 411
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.79 E-value=1.2e-18 Score=178.45 Aligned_cols=274 Identities=21% Similarity=0.258 Sum_probs=199.8
Q ss_pred HHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhh-ccceeeeeeeeccc
Q 002857 152 YEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIH-RKIIKVVTACSRVD 230 (873)
Q Consensus 152 ~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~H-pNIV~llg~c~~~~ 230 (873)
.+++..+ ..|.+.++||.|+||.+|.|....+|+.||||+=+... ....+..|.++...|+| ..|..+..+
T Consensus 8 ~~~~iv~-gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y----- 79 (341)
T KOG1163|consen 8 LEELIVG-GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHY----- 79 (341)
T ss_pred hhhheec-cceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhh-----
Confidence 3444333 57999999999999999999999999999999854322 23568889999999976 445555444
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND 310 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~ 310 (873)
..+..+-.+||+.+ |.||++++.- -...++..+++-++-|++.-++|+| .+++|||||||+|.|..-
T Consensus 80 ~~e~~ynvlVMdLL-GPsLEdLfnf---------C~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGl 146 (341)
T KOG1163|consen 80 GTEKDYNVLVMDLL-GPSLEDLFNF---------CSRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGL 146 (341)
T ss_pred ccccccceeeeecc-CccHHHHHHH---------HhhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeecc
Confidence 24566778999998 8899998742 3566888999999999999999999 899999999999999974
Q ss_pred C---CCeEEeccccccccccccc-----cccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccc
Q 002857 311 E---MTACVADFGIARFLEATNE-----QTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFK 382 (873)
Q Consensus 311 ~---~~vKLsDFGla~~~~~~~~-----~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~ 382 (873)
+ ..+.|+|||+|+.+.+... ........||..|.+-....+...+.+.|+=|+|.+|..+.-|..||++...
T Consensus 147 grh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 147 GRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred ccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 3 4688999999987654332 1223345699999998888888888999999999999999999999987432
Q ss_pred c--chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHH
Q 002857 383 D--NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIND 460 (873)
Q Consensus 383 ~--~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~E 460 (873)
. .+.+.......+...+.. +.+. .+.++.-.+.-|-..--++-|.-.-
T Consensus 227 ~tk~QKyEkI~EkK~s~~ie~-----LC~G-------------------------~P~EF~myl~Y~R~L~F~E~Pdy~y 276 (341)
T KOG1163|consen 227 ATKKQKYEKISEKKMSTPIEV-----LCKG-------------------------FPAEFAMYLNYCRGLGFEEKPDYMY 276 (341)
T ss_pred hhHHHHHHHHHHhhcCCCHHH-----HhCC-------------------------CcHHHHHHHHHHhhcCCCCCCcHHH
Confidence 2 111111111111111111 1111 1234566777888888888998887
Q ss_pred HHHHHHHHHHhhhcCC
Q 002857 461 VELGLRLIKKKLLETP 476 (873)
Q Consensus 461 Vl~~Le~i~~~l~~~~ 476 (873)
+.+.++.+...+....
T Consensus 277 lrqlFriLfr~ln~~~ 292 (341)
T KOG1163|consen 277 LRQLFRILFRTLNHQY 292 (341)
T ss_pred HHHHHHHHHhhccccC
Confidence 7777777766555443
No 412
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.79 E-value=3.4e-18 Score=181.90 Aligned_cols=200 Identities=22% Similarity=0.329 Sum_probs=167.4
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-hccceeeeeeeecccccCCceEEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
+|.+.++||+|.||.++.|+..-+++.||||.=.. .....++..|....+.|. .++|..++-| .+.+.+-.|
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--kS~APQLrdEYr~YKlL~g~~GIP~vYYF-----GqeG~~NiL 101 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--KSEAPQLRDEYRTYKLLGGTEGIPQVYYF-----GQEGKYNIL 101 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccc--cCCcchHHHHHHHHHHHcCCCCCCceeee-----ccccchhhh
Confidence 68899999999999999999989999999997432 223467888999999885 5788887765 355667789
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC-----CCCe
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND-----EMTA 314 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~-----~~~v 314 (873)
|+|.+ |-||+|+.. --...++..+++.||.|++.-++|+| .+.+|.|||||+|+||.. ...+
T Consensus 102 VidLL-GPSLEDLFD---------~CgR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~I 168 (449)
T KOG1165|consen 102 VIDLL-GPSLEDLFD---------LCGRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVI 168 (449)
T ss_pred hhhhh-CcCHHHHHH---------HhcCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceE
Confidence 99988 789999873 23567999999999999999999999 899999999999999974 3468
Q ss_pred EEecccccccccccccc-----ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 315 CVADFGIARFLEATNEQ-----TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~-----~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
.|+|||+|+.+...... .......||.+||+-....+...+.+-|+=|+|-++...|-|..||.+.
T Consensus 169 hiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 169 HIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred EEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 99999999987544321 1223456999999999999999999999999999999999999999874
No 413
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.78 E-value=5.6e-19 Score=181.63 Aligned_cols=139 Identities=16% Similarity=0.155 Sum_probs=107.4
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--c-------hhH-----------------HHHHHHHHHhhhhcc
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--A-------SKS-----------------FTVECEVMRNIIHRK 218 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--~-------~~~-----------------f~~Ei~iL~~L~HpN 218 (873)
...||+|+||.||+|... +|+.||||+++..... . ... ...|++++.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999885 8899999999743211 1 112 234999999999887
Q ss_pred ceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHH-hhCCCCCee
Q 002857 219 IIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYL-HLGCKPPIA 297 (873)
Q Consensus 219 IV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yL-H~~~s~gIv 297 (873)
+.....+. . . ..+|||||+++++|...+. ....+++.....++.|++.+|.|| | ..+|+
T Consensus 81 v~~p~~~~-----~-~-~~~iVmE~i~g~~l~~~~~----------~~~~~~~~~~~~i~~qi~~~L~~l~H---~~gii 140 (190)
T cd05147 81 IPCPEPIL-----L-K-SHVLVMEFIGDDGWAAPRL----------KDAPLSESKARELYLQVIQIMRILYQ---DCRLV 140 (190)
T ss_pred CCCCcEEE-----e-c-CCEEEEEEeCCCCCcchhh----------hcCCCCHHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 74433221 1 1 2389999999877765431 134578889999999999999999 6 78999
Q ss_pred eccCCCCCeeeCCCCCeEEecccccccc
Q 002857 298 HCDIKPSNILLNDEMTACVADFGIARFL 325 (873)
Q Consensus 298 HrDLKpsNILLd~~~~vKLsDFGla~~~ 325 (873)
||||||+|||++ ++.++|+|||+|...
T Consensus 141 HrDlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 141 HADLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred cCCCCHHHEEEE-CCcEEEEEccccccC
Confidence 999999999998 478999999999754
No 414
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.78 E-value=3.8e-19 Score=186.88 Aligned_cols=176 Identities=9% Similarity=0.082 Sum_probs=133.6
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhH---------HHHHHHHHHhhhhccceeeeeeeec
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKS---------FTVECEVMRNIIHRKIIKVVTACSR 228 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~---------f~~Ei~iL~~L~HpNIV~llg~c~~ 228 (873)
...+|...++||.|+||.||++.. ++..+|||++.......... +.+|+..+.+++|++|..+..++..
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 467899999999999999999755 46689999997544333222 6889999999999999999887542
Q ss_pred ccc---cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCC
Q 002857 229 VDY---QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSN 305 (873)
Q Consensus 229 ~~~---~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsN 305 (873)
... ......+|||||++|.+|.++.. ++. ....+++.+|..|| ..+++|||++|+|
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~N 165 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE--------------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGN 165 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh--------------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHH
Confidence 211 11345899999999999988641 111 34669999999999 8999999999999
Q ss_pred eeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHH
Q 002857 306 ILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMF 371 (873)
Q Consensus 306 ILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELl 371 (873)
|+++.++ ++|+|||............ .++....+..++||||||+++.-+.
T Consensus 166 ili~~~g-i~liDfg~~~~~~e~~a~d--------------~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 166 FIVSKNG-LRIIDLSGKRCTAQRKAKD--------------RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEeCCC-EEEEECCCcccccchhhHH--------------HHHHHhHhcccccccceeEeehHHH
Confidence 9999988 9999999887543211110 0333445667899999999987654
No 415
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.78 E-value=2.8e-19 Score=204.32 Aligned_cols=218 Identities=25% Similarity=0.329 Sum_probs=160.7
Q ss_pred HHhhhhccceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhh
Q 002857 211 MRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHL 290 (873)
Q Consensus 211 L~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~ 290 (873)
|+.+.|.|+.+++|.+. ++...++|.+|+..|+|.+.+.. ....++|.....++++|+.||+|||+
T Consensus 1 l~~l~h~n~~~f~g~~~-----~~~~~~~i~~~c~rGsl~D~i~~---------~~~~~d~~F~~s~~rdi~~Gl~ylh~ 66 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASV-----DGPEMIVIWEYCSRGSLLDILSN---------EDIKLDYFFILSFIRDISKGLAYLHN 66 (484)
T ss_pred CcccchhhhhhheeeEe-----cCCceEEEEeeecCccHHhHHhc---------cccCccHHHHHHHHHHHHHHHHHHhc
Confidence 35688999999999974 34778999999999999999952 46779999999999999999999994
Q ss_pred CCCCCeeeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCC-------CCCcchhhHhH
Q 002857 291 GCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-------ETSSYGDVYSF 363 (873)
Q Consensus 291 ~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-------~~s~ksDVwSf 363 (873)
++-..|+.|+++|+++|..+.+||+|||+..+..............-...|.|||.+... ..+.++|||||
T Consensus 67 --s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~ 144 (484)
T KOG1023|consen 67 --SPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSF 144 (484)
T ss_pred --CcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehH
Confidence 233399999999999999999999999999876532222222223356789999998764 14677999999
Q ss_pred HHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhh-hhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHH
Q 002857 364 GILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFF-KEIEEEETVYKYKKAPSSSTQRSIILECLNSICE 442 (873)
Q Consensus 364 GvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~-~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~ 442 (873)
|++++|+++.+.||+........ .+++..... .... -+|..... .+....+..
T Consensus 145 ~ii~~ei~~r~~~~~~~~~~~~~-------------~eii~~~~~~~~~~---------~rP~i~~~----~e~~~~l~~ 198 (484)
T KOG1023|consen 145 GIIMYEILFRSGPFDLRNLVEDP-------------DEIILRVKKGGSNP---------FRPSIELL----NELPPELLL 198 (484)
T ss_pred HHHHHHHHhccCccccccccCCh-------------HHHHHHHHhcCCCC---------cCcchhhh----hhcchHHHH
Confidence 99999999999999763322211 111111000 0000 01111110 133446889
Q ss_pred HHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 443 IGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 443 L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
++..||..+|++||++.+|-..++.+..
T Consensus 199 l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 199 LVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred HHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 9999999999999999999988887644
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.76 E-value=4.6e-18 Score=174.51 Aligned_cols=140 Identities=17% Similarity=0.137 Sum_probs=109.1
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcc--------------------------hhHHHHHHHHHHhhhhcc
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDA--------------------------SKSFTVECEVMRNIIHRK 218 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~--------------------------~~~f~~Ei~iL~~L~HpN 218 (873)
...||+|+||.||+|.+. +|+.||||+++...... ...+..|++.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999876 89999999987542110 112357899999999998
Q ss_pred ceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCC-CCee
Q 002857 219 IIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCK-PPIA 297 (873)
Q Consensus 219 IV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s-~gIv 297 (873)
+.....+.. . ..+|||||++++++..... ....++......++.|++.+|.+|| . .+|+
T Consensus 81 i~~p~~~~~-----~--~~~lVmE~~~g~~~~~~~l----------~~~~~~~~~~~~i~~~l~~~l~~lH---~~~giv 140 (190)
T cd05145 81 VPVPEPILL-----K--KNVLVMEFIGDDGSPAPRL----------KDVPLEEEEAEELYEQVVEQMRRLY---QEAGLV 140 (190)
T ss_pred CCCceEEEe-----c--CCEEEEEEecCCCchhhhh----------hhccCCHHHHHHHHHHHHHHHHHHH---HhCCEe
Confidence 754443311 1 2489999999886543321 1234677889999999999999999 6 8999
Q ss_pred eccCCCCCeeeCCCCCeEEeccccccccc
Q 002857 298 HCDIKPSNILLNDEMTACVADFGIARFLE 326 (873)
Q Consensus 298 HrDLKpsNILLd~~~~vKLsDFGla~~~~ 326 (873)
||||||+|||++ ++.++|+|||++....
T Consensus 141 HrDlkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 141 HGDLSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred cCCCChhhEEEE-CCCEEEEEcccceecC
Confidence 999999999999 8899999999998654
No 417
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.76 E-value=6e-19 Score=209.80 Aligned_cols=251 Identities=20% Similarity=0.201 Sum_probs=176.8
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHH--HHhhhhccceeeeeeeecccccCCceE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEV--MRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~i--L~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
+|...+.||.+.|=+|.+|++.+ | .|+||++-+.. .-..+.|.++++- ...++|||.+++.-+ ...+...
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~-----~~t~kAA 96 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKV-----LVTDKAA 96 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHH-----HHhhHHH
Confidence 56778899999999999998754 3 49999986443 3334555554444 444589999998765 2345556
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
|||-+|..+ +|+|.| ...+-|...+.+.|+.|++.||...| ..+|+|||||.+||||+.-..+.|+
T Consensus 97 ylvRqyvkh-nLyDRl----------STRPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~Lt 162 (1431)
T KOG1240|consen 97 YLVRQYVKH-NLYDRL----------STRPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLT 162 (1431)
T ss_pred HHHHHHHhh-hhhhhh----------ccchHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhh
Confidence 788888855 999988 34667888899999999999999999 9999999999999999999999999
Q ss_pred cccccccc--ccccccccc---cccccccccCCCcccCCC----------C-CCcchhhHhHHHHHHHHHh-CCCCCCcc
Q 002857 318 DFGIARFL--EATNEQTSS---IGVKGTTGYIAPEYGMGH----------E-TSSYGDVYSFGILLLEMFT-GLRPSDDM 380 (873)
Q Consensus 318 DFGla~~~--~~~~~~~~~---~~~~Gt~~Y~APE~l~~~----------~-~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~ 380 (873)
||..-+.. ..++..... ..-..-..|+|||.+... . .+++.||||+||++.||++ |+++|+-.
T Consensus 163 DFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS 242 (1431)
T KOG1240|consen 163 DFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS 242 (1431)
T ss_pred cccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH
Confidence 99876532 222211111 111244579999975431 2 6788999999999999999 78888641
Q ss_pred cccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHH
Q 002857 381 FKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIND 460 (873)
Q Consensus 381 ~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~E 460 (873)
.+..+-... ......+ +.++ +. ..+..+++.|++.||.+|-++.+
T Consensus 243 -----QL~aYr~~~-~~~~e~~--------------Le~I-------------ed--~~~Rnlil~Mi~rdPs~RlSAed 287 (1431)
T KOG1240|consen 243 -----QLLAYRSGN-ADDPEQL--------------LEKI-------------ED--VSLRNLILSMIQRDPSKRLSAED 287 (1431)
T ss_pred -----HHHhHhccC-ccCHHHH--------------HHhC-------------cC--ccHHHHHHHHHccCchhccCHHH
Confidence 111111000 0000000 0010 00 13667999999999999999999
Q ss_pred HHHHHHH
Q 002857 461 VELGLRL 467 (873)
Q Consensus 461 Vl~~Le~ 467 (873)
.++.-++
T Consensus 288 yL~~yrG 294 (1431)
T KOG1240|consen 288 YLQKYRG 294 (1431)
T ss_pred HHHhhhc
Confidence 9988443
No 418
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=1.9e-17 Score=200.98 Aligned_cols=201 Identities=23% Similarity=0.252 Sum_probs=159.9
Q ss_pred HHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh---hccceeeeeeeeccc
Q 002857 154 ALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII---HRKIIKVVTACSRVD 230 (873)
Q Consensus 154 el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~---HpNIV~llg~c~~~~ 230 (873)
+++.-...|.+.+.||+|+||+||+|...+ ++.||+|+=+. ....+|.--.+++.+|+ -+-|..+...
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P---~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a----- 762 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKP---PNPWEFYICLQVMERLKPQMLPSIMHISSA----- 762 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecC---CCceeeeehHHHHHhhchhhhcchHHHHHH-----
Confidence 334445678889999999999999999865 99999998542 23345666666777776 1223333222
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC-
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN- 309 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd- 309 (873)
+...+.-+||+||.+.|+|.+++ +..+.++|...+.|+.|+++-+++|| ..+||||||||+|.||.
T Consensus 763 ~~~~~~S~lv~ey~~~Gtlld~~----------N~~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~ 829 (974)
T KOG1166|consen 763 HVFQNASVLVSEYSPYGTLLDLI----------NTNKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRR 829 (974)
T ss_pred HccCCcceeeeeccccccHHHhh----------ccCCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeec
Confidence 12244568999999999999999 35778999999999999999999999 89999999999999994
Q ss_pred ------CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCC
Q 002857 310 ------DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRP 376 (873)
Q Consensus 310 ------~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~P 376 (873)
+..-++|+|||.+-.+.--.+......+++|-.+-.+|+..|..++..+|-|.|+.+++-||.|+.-
T Consensus 830 ~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 830 EICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 3346899999999765444444555667899999999999999999999999999999999999743
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.71 E-value=5.4e-17 Score=167.74 Aligned_cols=187 Identities=13% Similarity=0.040 Sum_probs=137.7
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcc----hhHHHHHHHHHHhhh-hccceeeeeeeecccccCCce
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDA----SKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~----~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~ 236 (873)
+.+...|++|+||+||.+.. .+.+++.+.+.....-. ...+.+|+++|++|. |+++.+++++ ..
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---------~~ 72 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---------DG 72 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---------cC
Confidence 34568899999999997754 67788888776433211 125789999999995 5889999886 13
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccC-CCCCeeeCCCCCeE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDI-KPSNILLNDEMTAC 315 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDL-KpsNILLd~~~~vK 315 (873)
.+++|||+.|.+|.+.+.. ....++.|++.+|.++| ..+|+|||| ||+|||++.++.++
T Consensus 73 ~~lvmeyI~G~~L~~~~~~-----------------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~ 132 (218)
T PRK12274 73 RHLDRSYLAGAAMYQRPPR-----------------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPA 132 (218)
T ss_pred EEEEEeeecCccHHhhhhh-----------------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEE
Confidence 6899999999898764410 11357889999999999 899999999 79999999999999
Q ss_pred Eecccccccccccccc----c-------cccccccccccCCCcccCCC-CCC-cchhhHhHHHHHHHHHhCCCCCCc
Q 002857 316 VADFGIARFLEATNEQ----T-------SSIGVKGTTGYIAPEYGMGH-ETS-SYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 316 LsDFGla~~~~~~~~~----~-------~~~~~~Gt~~Y~APE~l~~~-~~s-~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|+|||++......... . ...-...++.|++|+...-. ..+ ...+.++-|.-+|.++|+..++-.
T Consensus 133 LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 133 VIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred EEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 9999999855432210 0 01112256777777743221 222 456888999999999999888643
No 420
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.71 E-value=2.6e-17 Score=177.94 Aligned_cols=207 Identities=19% Similarity=0.279 Sum_probs=133.1
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhh----------hccceeeeeeeec
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNII----------HRKIIKVVTACSR 228 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~----------HpNIV~llg~c~~ 228 (873)
+.....||.|+++.||.+++..+++.+|||++..... ...+++.+|.-....+. |-.++--++...-
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 3456899999999999999999999999999864332 23355666654444421 2222222121110
Q ss_pred c---c-c---cCCc-----eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCe
Q 002857 229 V---D-Y---QGND-----FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPI 296 (873)
Q Consensus 229 ~---~-~---~~~~-----~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gI 296 (873)
. . + .+.. ..+++|+-+ .++|.+++....... .....+....++.+..|+++.+++|| ..|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~---~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~Gl 166 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRA---QTHSPLAFAARLSLTVQMIRLVANLH---SYGL 166 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHT---TTSHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcc---cccchhHHHHHHHHHHHHHHHHHHHh---hcce
Confidence 0 0 0 0011 236788887 559988874322111 11234556677888899999999999 8999
Q ss_pred eeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCC--------CCCCcchhhHhHHHHHH
Q 002857 297 AHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG--------HETSSYGDVYSFGILLL 368 (873)
Q Consensus 297 vHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~--------~~~s~ksDVwSfGvvL~ 368 (873)
+|+||+|+|++++.+|.++|+||+........... ...+..|.+||.... -.++.+.|.|++|+++|
T Consensus 167 VHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly 241 (288)
T PF14531_consen 167 VHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLY 241 (288)
T ss_dssp EEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHH
T ss_pred EecccceeeEEEcCCCCEEEcChHHHeecCceeec-----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHH
Confidence 99999999999999999999999887654322111 234578999997533 25788999999999999
Q ss_pred HHHhCCCCCCcc
Q 002857 369 EMFTGLRPSDDM 380 (873)
Q Consensus 369 ELlTGk~Pf~~~ 380 (873)
.|++|..||+..
T Consensus 242 ~lWC~~lPf~~~ 253 (288)
T PF14531_consen 242 SLWCGRLPFGLS 253 (288)
T ss_dssp HHHHSS-STCCC
T ss_pred HHHHccCCCCCC
Confidence 999999999764
No 421
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=3.2e-17 Score=177.70 Aligned_cols=203 Identities=21% Similarity=0.233 Sum_probs=139.4
Q ss_pred hhccceeeeeeeeccc----------------------ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchh
Q 002857 215 IHRKIIKVVTACSRVD----------------------YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSL 272 (873)
Q Consensus 215 ~HpNIV~llg~c~~~~----------------------~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~ 272 (873)
+|||||++.++|.+.- +.++..+|+||...+. +|.++|- ....+..
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~-----------~~~~s~r 341 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW-----------TRHRSYR 341 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh-----------cCCCchH
Confidence 4999999998765431 1234567899998865 8999883 2345666
Q ss_pred hhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee--CCCC--CeEEeccccccccccccc----cccccccccccccC
Q 002857 273 ERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL--NDEM--TACVADFGIARFLEATNE----QTSSIGVKGTTGYI 344 (873)
Q Consensus 273 ~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL--d~~~--~vKLsDFGla~~~~~~~~----~~~~~~~~Gt~~Y~ 344 (873)
...-|+.|+++|+.||| .++|.|||||++|||+ |+|. ...|+|||.+-.-+...- ........|...-|
T Consensus 342 ~~~~~laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lm 418 (598)
T KOG4158|consen 342 TGRVILAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLM 418 (598)
T ss_pred HHHHHHHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceec
Confidence 78889999999999999 9999999999999998 4554 567899998743221110 11111234778899
Q ss_pred CCcccCCCC------CCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHh
Q 002857 345 APEYGMGHE------TSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVY 418 (873)
Q Consensus 345 APE~l~~~~------~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~ 418 (873)
|||+....+ ...|+|.|+.|.+.||+++...||....+-..+...+-
T Consensus 419 APEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq--------------------------- 471 (598)
T KOG4158|consen 419 APEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ--------------------------- 471 (598)
T ss_pred chhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh---------------------------
Confidence 999876532 35689999999999999999999965211111111100
Q ss_pred hhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 419 KYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 419 ~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
+- ..|. ..+.++..+.+++..-|+.||++||+..-....|+
T Consensus 472 e~-qLPa------lp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 472 ES-QLPA------LPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred hh-hCCC------CcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 00 0011 11123344678899999999999999876666665
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.70 E-value=1.2e-16 Score=166.74 Aligned_cols=140 Identities=20% Similarity=0.257 Sum_probs=106.6
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-----hhccceeeeeeeecccccCCce
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-----IHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-----~HpNIV~llg~c~~~~~~~~~~ 236 (873)
+...++||+|+||.||. +..++.. +||++........+.+.+|+.+++.+ .||||++++|++... .+.+.
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~--~g~g~ 78 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD--CGTGY 78 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC--CCCeE
Confidence 34568999999999996 5555555 69988755444567899999999999 579999999996431 11123
Q ss_pred -EEEEEee--cCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHH-HHHhhCCCCCeeeccCCCCCeeeCC--
Q 002857 237 -KALVYEF--MPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASAL-EYLHLGCKPPIAHCDIKPSNILLND-- 310 (873)
Q Consensus 237 -~~LV~Ey--~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL-~yLH~~~s~gIvHrDLKpsNILLd~-- 310 (873)
..+|+|| +.+|+|.+++.. ..+++. ..++.+++.++ +||| +.+|+||||||+|||++.
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~-----------~~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~ 142 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQ-----------CRYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRIS 142 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHc-----------ccccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccC
Confidence 3478999 557999999942 124444 45678888888 9999 899999999999999973
Q ss_pred --CCCeEEeccccc
Q 002857 311 --EMTACVADFGIA 322 (873)
Q Consensus 311 --~~~vKLsDFGla 322 (873)
+..++|+||+.+
T Consensus 143 ~~~~~~~LiDg~G~ 156 (210)
T PRK10345 143 ESEVIPVVCDNIGE 156 (210)
T ss_pred CCCCcEEEEECCCC
Confidence 348999995444
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=3.1e-16 Score=166.82 Aligned_cols=142 Identities=18% Similarity=0.169 Sum_probs=110.7
Q ss_pred CCCcceeecccCceEEEEEE-EcCCCcEEEEEEeeccCCc------------------------chhHHHHHHHHHHhhh
Q 002857 161 GFSSENLIGAGNFASVYKGI-LFEGAPAVAIKVFNFLHHD------------------------ASKSFTVECEVMRNII 215 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~-~~~~g~~VAVK~l~~~~~~------------------------~~~~f~~Ei~iL~~L~ 215 (873)
.|.+.+.||+|+||.||+|. ...+|+.||||+++..... ....+..|++++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999998 5678999999998743210 0123568999999997
Q ss_pred hcc--ceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCC
Q 002857 216 HRK--IIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCK 293 (873)
Q Consensus 216 HpN--IV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s 293 (873)
+.. +.+++++ ...+|||||+++++|...+. ....+...+...++.||+.+|++|| .
T Consensus 109 ~~~i~~p~~~~~---------~~~~lV~E~~~g~~L~~~~~----------~~~~~~~~~~~~i~~qi~~~l~~LH---~ 166 (237)
T smart00090 109 EAGVPVPKPIAW---------RRNVLVMEFIGGDGLPAPRL----------KDVEPEEEEEFELYDDILEEMRKLY---K 166 (237)
T ss_pred hcCCCCCeeeEe---------cCceEEEEEecCCccccccc----------ccCCcchHHHHHHHHHHHHHHHHHH---h
Confidence 633 3344433 12479999999988876542 1223455567899999999999999 8
Q ss_pred CC-eeeccCCCCCeeeCCCCCeEEecccccccc
Q 002857 294 PP-IAHCDIKPSNILLNDEMTACVADFGIARFL 325 (873)
Q Consensus 294 ~g-IvHrDLKpsNILLd~~~~vKLsDFGla~~~ 325 (873)
.+ |+||||||+||+++ ++.++|+|||.+...
T Consensus 167 ~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 167 EGELVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred cCCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 89 99999999999999 889999999998753
No 424
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.65 E-value=2e-17 Score=189.33 Aligned_cols=187 Identities=26% Similarity=0.299 Sum_probs=153.0
Q ss_pred eecccCceEEEEEEE---cCCCcEEEEEEeeccCCc--chhHHHHHHHHHHhhh-hccceeeeeeeecccccCCceEEEE
Q 002857 167 LIGAGNFASVYKGIL---FEGAPAVAIKVFNFLHHD--ASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 167 ~LG~G~fG~VYkg~~---~~~g~~VAVK~l~~~~~~--~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
.+|+|.||.|++..- .+.+..+|+|+++..... .......|..++..++ ||.+|++.-. ++.+...+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhya-----fqt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYA-----FQTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeee-----eccccchhHh
Confidence 379999999987542 234667889988643221 1124566888888886 9999999776 4667789999
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccc
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFG 320 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFG 320 (873)
++|..+|.|...+. ....+++.....+...++-+++++| +.+|+|||+|++||+++.+|++++.|||
T Consensus 76 ld~~rgg~lft~l~----------~~~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfg 142 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLS----------KEVMFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFG 142 (612)
T ss_pred hhhcccchhhhccc----------cCCchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCch
Confidence 99999999998873 3556777777888889999999999 9999999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 321 IARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 321 la~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+++..-..... .||..|||||++. .....+|.||||++++||+||..||..
T Consensus 143 lske~v~~~~~------cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 143 LSKEAVKEKIA------CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hhhHhHhhhhc------ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 99865432221 6899999999988 457789999999999999999999976
No 425
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.65 E-value=1.2e-15 Score=157.40 Aligned_cols=146 Identities=18% Similarity=0.171 Sum_probs=113.5
Q ss_pred HHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc----------------------chhHHHHHHH
Q 002857 152 YEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD----------------------ASKSFTVECE 209 (873)
Q Consensus 152 ~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~----------------------~~~~f~~Ei~ 209 (873)
++++......|.+.+.||+|+||.||++.. .+++.||||++...... ....+..|+.
T Consensus 7 ~~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 85 (198)
T cd05144 7 LHTLVKRGVVESLGNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFA 85 (198)
T ss_pred HHHHHHcCchhhcCCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHH
Confidence 345555555588889999999999999987 47899999987643210 0123677899
Q ss_pred HHHhhhhcc--ceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHH
Q 002857 210 VMRNIIHRK--IIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEY 287 (873)
Q Consensus 210 iL~~L~HpN--IV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~y 287 (873)
++..+.|.+ +...++. ...++||||+++++|.++... .....++.+++.++.+
T Consensus 86 ~l~~l~~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~----------------~~~~~~~~~i~~~l~~ 140 (198)
T cd05144 86 ALKALYEEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL----------------EDPEEVLDEILEEIVK 140 (198)
T ss_pred HHHHHHHcCCCCCceeec---------CCceEEEEEeCCcchhhcccc----------------ccHHHHHHHHHHHHHH
Confidence 999998874 4444432 235899999999999875420 2456789999999999
Q ss_pred HhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccccc
Q 002857 288 LHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLE 326 (873)
Q Consensus 288 LH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~ 326 (873)
+| ..+|+||||||+||++++++.++|+|||++....
T Consensus 141 lh---~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 141 AY---KHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred HH---HCCCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 99 8999999999999999999999999999996543
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.64 E-value=1.2e-15 Score=158.05 Aligned_cols=134 Identities=22% Similarity=0.273 Sum_probs=109.2
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--------chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--------ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--------~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
+.||+|++|.||+|.+ .+..|++|+....... ....+.+|++++..+.|++|.....++. .....
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFV-----DPENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEE-----eCCCC
Confidence 5799999999999987 5667999986532211 1235788999999999999877666542 23457
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||++|++|.+++.. . .+ .+..++.+++.+|.+|| ..+++|+|++|.|||++ ++.++|+
T Consensus 75 ~lv~e~~~G~~L~~~~~~----------~---~~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~li 136 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINS----------N---GM-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLI 136 (211)
T ss_pred EEEEEEeCCcCHHHHHHh----------c---cH-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEE
Confidence 899999999999998842 1 11 78899999999999999 89999999999999999 7899999
Q ss_pred ccccccc
Q 002857 318 DFGIARF 324 (873)
Q Consensus 318 DFGla~~ 324 (873)
|||.+..
T Consensus 137 Df~~a~~ 143 (211)
T PRK14879 137 DFGLAEF 143 (211)
T ss_pred ECCcccC
Confidence 9999864
No 427
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.61 E-value=2.7e-15 Score=177.78 Aligned_cols=145 Identities=19% Similarity=0.274 Sum_probs=112.2
Q ss_pred CHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEee--ccCC------cchhHHHHHHHHHHhhhhccceee
Q 002857 151 SYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFN--FLHH------DASKSFTVECEVMRNIIHRKIIKV 222 (873)
Q Consensus 151 s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~--~~~~------~~~~~f~~Ei~iL~~L~HpNIV~l 222 (873)
++.........|...+.||+|+||.||+|.+... .+++|+.. .... ...+.+.+|++++.+++|++++..
T Consensus 324 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p 401 (535)
T PRK09605 324 TWIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTP 401 (535)
T ss_pred eeccccccccccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCee
Confidence 3444444455667789999999999999987443 34444321 1111 112468899999999999999887
Q ss_pred eeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCC
Q 002857 223 VTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIK 302 (873)
Q Consensus 223 lg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLK 302 (873)
..++. .....++||||+++++|.+++. ....++.+++++|.||| +.+|+|||||
T Consensus 402 ~~~~~-----~~~~~~lv~E~~~g~~L~~~l~------------------~~~~~~~~i~~~L~~lH---~~giiHrDlk 455 (535)
T PRK09605 402 VIYDV-----DPEEKTIVMEYIGGKDLKDVLE------------------GNPELVRKVGEIVAKLH---KAGIVHGDLT 455 (535)
T ss_pred EEEEE-----eCCCCEEEEEecCCCcHHHHHH------------------HHHHHHHHHHHHHHHHH---hCCCccCCCC
Confidence 76642 2345689999999999999872 35679999999999999 8999999999
Q ss_pred CCCeeeCCCCCeEEeccccccc
Q 002857 303 PSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 303 psNILLd~~~~vKLsDFGla~~ 324 (873)
|+|||+ +++.++|+|||+++.
T Consensus 456 p~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 456 TSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred hHHEEE-ECCcEEEEeCccccc
Confidence 999999 677999999999975
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.61 E-value=2.9e-15 Score=153.88 Aligned_cols=130 Identities=22% Similarity=0.273 Sum_probs=102.5
Q ss_pred eecccCceEEEEEEEcCCCcEEEEEEeeccCCc--------chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 167 LIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--------ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 167 ~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--------~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.||+|+||.||+|.+ ++..|++|+....... ....+.+|++++..++|+++.....++. .....+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDV-----DPDNKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-----ECCCCE
Confidence 489999999999985 5678999986532111 1245778999999999887554443321 233468
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||++|++|.+++.. .. ..++.+++.+|.+|| ..+++|||++|.||+++ ++.++++|
T Consensus 74 lv~e~~~g~~l~~~~~~----------~~-------~~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liD 132 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEE----------GN-------DELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLID 132 (199)
T ss_pred EEEEEECCccHHHHHhh----------cH-------HHHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEE
Confidence 99999999999998732 00 078999999999999 89999999999999999 88999999
Q ss_pred cccccc
Q 002857 319 FGIARF 324 (873)
Q Consensus 319 FGla~~ 324 (873)
||+++.
T Consensus 133 fg~a~~ 138 (199)
T TIGR03724 133 FGLGKY 138 (199)
T ss_pred CCCCcC
Confidence 999874
No 429
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.59 E-value=1.1e-15 Score=182.48 Aligned_cols=167 Identities=28% Similarity=0.375 Sum_probs=124.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
..+|+.+++|..|+||.||..+++.+.+.+|+|+-+.. -|+ +||..+.+- .+
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~------------lil-----Rnilt~a~n-----------pf 133 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN------------LIL-----RNILTFAGN-----------PF 133 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccc------------hhh-----hccccccCC-----------cc
Confidence 35788999999999999999999888889999653211 011 223333322 23
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
.| |+-...++ ..+.++. +++.+++||| +.+|+|||+||+|.||+.-|++|+.|
T Consensus 134 vv------gDc~tllk----------~~g~lPv--------dmvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTD 186 (1205)
T KOG0606|consen 134 VV------GDCATLLK----------NIGPLPV--------DMVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTD 186 (1205)
T ss_pred ee------chhhhhcc----------cCCCCcc--------hhhHHhHhhc---cCCeecCCCCCCcceeeecccccccc
Confidence 33 44444442 2222322 2288999999 99999999999999999999999999
Q ss_pred ccccccccccc-------------ccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 319 FGIARFLEATN-------------EQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 319 FGla~~~~~~~-------------~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
||+++..-... .......+.||+.|+|||++....|....|.|++|+|+||.+-|..||...
T Consensus 187 fgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGd 261 (1205)
T KOG0606|consen 187 FGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD 261 (1205)
T ss_pred hhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCC
Confidence 99987532211 112233567999999999999999999999999999999999999999764
No 430
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.59 E-value=3.8e-16 Score=176.04 Aligned_cols=124 Identities=27% Similarity=0.471 Sum_probs=106.4
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..+|.|+++...+|.+||.. .......++...+.++.|++.|+.| ++.+|+|+||.||++..+..+|
T Consensus 330 ~lyI~Mn~c~~~tledWl~r-------r~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~k 396 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRR-------RRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLK 396 (516)
T ss_pred chhhhhhhhhhhhHHHHhhC-------CCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhh
Confidence 47899999999999999953 1234556788899999999999999 5899999999999999999999
Q ss_pred Eecccccccccccc----ccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh
Q 002857 316 VADFGIARFLEATN----EQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT 372 (873)
Q Consensus 316 LsDFGla~~~~~~~----~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT 372 (873)
|+|||+........ .....+...||..||+||.+.+..|+.|+||||||+||+||++
T Consensus 397 IgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 397 IGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 99999987654433 1223445679999999999999999999999999999999997
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.54 E-value=3.6e-14 Score=144.16 Aligned_cols=135 Identities=19% Similarity=0.238 Sum_probs=97.6
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcc--hhHH----------------------HHHHHHHHhhhhcc--
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDA--SKSF----------------------TVECEVMRNIIHRK-- 218 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~--~~~f----------------------~~Ei~iL~~L~HpN-- 218 (873)
.+.||+|+||.||+|.+. +++.||||+++...... ...+ ..|...+.++.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 468999999999999875 78899999987432211 1111 34566666665443
Q ss_pred ceeeeeeeecccccCCceEEEEEeecCCCChhhh-cccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCC-CCe
Q 002857 219 IIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEW-IHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCK-PPI 296 (873)
Q Consensus 219 IV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~-L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s-~gI 296 (873)
+.+.++. ...++||||++++++... +.. .... .....++.+++.++.++| . .+|
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~-----------~~~~-~~~~~~~~~~~~~l~~lh---~~~~i 136 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKD-----------VRLL-EDPEELYDQILELMRKLY---REAGL 136 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhh-----------hhhc-ccHHHHHHHHHHHHHHHh---hccCc
Confidence 3444433 135899999999654322 211 0001 567889999999999999 7 999
Q ss_pred eeccCCCCCeeeCCCCCeEEecccccccc
Q 002857 297 AHCDIKPSNILLNDEMTACVADFGIARFL 325 (873)
Q Consensus 297 vHrDLKpsNILLd~~~~vKLsDFGla~~~ 325 (873)
+|+||||+||+++ ++.++|+|||.+...
T Consensus 137 vH~Dl~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 137 VHGDLSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CcCCCChhhEEEE-CCcEEEEECcccccc
Confidence 9999999999999 899999999999754
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.52 E-value=1.3e-13 Score=132.47 Aligned_cols=135 Identities=21% Similarity=0.261 Sum_probs=110.0
Q ss_pred cceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhh--ccceeeeeeeecccccCCceEEEEE
Q 002857 164 SENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIH--RKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 164 ~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~H--pNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.+.||+|.++.||++... +..+++|....... ...+..|+.++..++| .++.+++++. ...+..+++|
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~-----~~~~~~~~v~ 72 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASG-----ESDGWSYLLM 72 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEc-----CCCCccEEEE
Confidence 4578999999999999873 36899999864432 4678999999999987 4888888874 3346789999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||++++.+..+ +......++.+++++|++||.....+++|+||+|+||+++..+.++++|||.
T Consensus 73 e~~~g~~~~~~-----------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~ 135 (155)
T cd05120 73 EWIEGETLDEV-----------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEY 135 (155)
T ss_pred EecCCeecccC-----------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccc
Confidence 99988766542 3446678999999999999943335799999999999999989999999999
Q ss_pred ccc
Q 002857 322 ARF 324 (873)
Q Consensus 322 a~~ 324 (873)
+..
T Consensus 136 ~~~ 138 (155)
T cd05120 136 AGY 138 (155)
T ss_pred ccC
Confidence 874
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.46 E-value=4.5e-13 Score=142.81 Aligned_cols=140 Identities=11% Similarity=0.108 Sum_probs=104.6
Q ss_pred ceeec-ccCceEEEEEEEcCCCcEEEEEEeeccC-------------CcchhHHHHHHHHHHhhhhccc--eeeeeeeec
Q 002857 165 ENLIG-AGNFASVYKGILFEGAPAVAIKVFNFLH-------------HDASKSFTVECEVMRNIIHRKI--IKVVTACSR 228 (873)
Q Consensus 165 ~~~LG-~G~fG~VYkg~~~~~g~~VAVK~l~~~~-------------~~~~~~f~~Ei~iL~~L~HpNI--V~llg~c~~ 228 (873)
...|| .||.|+||.+.. ++..+|||++.... ......+.+|++++.+++|++| ++.+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 35788 899999999876 46789999885211 1122467889999999999885 667766422
Q ss_pred ccccCCceEEEEEeecCC-CChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCee
Q 002857 229 VDYQGNDFKALVYEFMPN-GSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNIL 307 (873)
Q Consensus 229 ~~~~~~~~~~LV~Ey~~~-GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNIL 307 (873)
.. ......++|||++++ .+|.+++.. ..++. ..+.+|+.+|.+|| ..||+||||||.|||
T Consensus 114 ~~-~~~~~~~lV~e~l~G~~~L~~~l~~-----------~~l~~----~~~~~i~~~l~~lH---~~GI~HrDlkp~NIL 174 (239)
T PRK01723 114 RH-GLFYRADILIERIEGARDLVALLQE-----------APLSE----EQWQAIGQLIARFH---DAGVYHADLNAHNIL 174 (239)
T ss_pred ec-CcceeeeEEEEecCCCCCHHHHHhc-----------CCCCH----HHHHHHHHHHHHHH---HCCCCCCCCCchhEE
Confidence 11 111124699999997 689888732 12332 24678999999999 899999999999999
Q ss_pred eCCCCCeEEecccccccc
Q 002857 308 LNDEMTACVADFGIARFL 325 (873)
Q Consensus 308 Ld~~~~vKLsDFGla~~~ 325 (873)
++.++.++|+|||.+...
T Consensus 175 v~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 175 LDPDGKFWLIDFDRGELR 192 (239)
T ss_pred EcCCCCEEEEECCCcccC
Confidence 999889999999998753
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.38 E-value=7.6e-14 Score=166.31 Aligned_cols=253 Identities=23% Similarity=0.298 Sum_probs=185.2
Q ss_pred cCCCcceeecccCceEEEEEEEcC-CCcEEEEEEeeccC--CcchhHHHHHHHHHHhhh-hccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE-GAPAVAIKVFNFLH--HDASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~-~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~ 235 (873)
..|...+.||+|.|+.|-...... ....+|+|.+.... ....+....|..+-..+. |.|++++++. ....+
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~-----~~~~~ 94 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEP-----SSSPR 94 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCc-----cCCCc
Confidence 456677889999999998876533 34456777665432 222344455777777776 9999999998 35677
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC-Ce
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM-TA 314 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~-~v 314 (873)
..+++++|..++++.+.+.. ......+....-.++.|+..++.|+|. ..++.|+||||+|.+++..+ ..
T Consensus 95 ~~~~~~~~s~g~~~f~~i~~--------~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l 164 (601)
T KOG0590|consen 95 SYLLSLSYSDGGSLFSKISH--------PDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSAL 164 (601)
T ss_pred ccccccCccccccccccccc--------CCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcc
Confidence 88999999999999988721 122245666778899999999999995 57999999999999999999 99
Q ss_pred EEecccccccccc-cccccccccccc-ccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHH
Q 002857 315 CVADFGIARFLEA-TNEQTSSIGVKG-TTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWV 391 (873)
Q Consensus 315 KLsDFGla~~~~~-~~~~~~~~~~~G-t~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~ 391 (873)
+++|||+|..+.. ...........| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++........+..|.
T Consensus 165 ~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~ 244 (601)
T KOG0590|consen 165 KIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWK 244 (601)
T ss_pred cCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeec
Confidence 9999999987765 333334444567 9999999998884 456778999999999999999999877544444434443
Q ss_pred hh----------cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCc
Q 002857 392 QS----------ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSS 427 (873)
Q Consensus 392 ~~----------~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~ 427 (873)
.. .+......++...+......+.+..++...+|..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~ 290 (601)
T KOG0590|consen 245 SNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLS 290 (601)
T ss_pred ccccccccCccccCChhhhhcccccccCCchhcccccccccccccc
Confidence 22 2333556666666665566666666655555543
No 435
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.34 E-value=1.5e-12 Score=139.30 Aligned_cols=160 Identities=22% Similarity=0.375 Sum_probs=122.8
Q ss_pred HHHHhhhhccceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHH
Q 002857 209 EVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYL 288 (873)
Q Consensus 209 ~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yL 288 (873)
.-|-++.|.|||++..|..+..+.+.....++.|||..|+|.++|+.. ......+......+|+.||..||.||
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt------~~~~~a~~~~~wkkw~tqIlsal~yL 192 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRT------KKNQKALFQKAWKKWCTQILSALSYL 192 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHH------HHhhhhhhHHHHHHHHHHHHhhhhhh
Confidence 345566899999999998776666777889999999999999999642 13345677777889999999999999
Q ss_pred hhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccccc--ccccccccccccccccCCCcccCCCCCCcchhhHhHHHH
Q 002857 289 HLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEA--TNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGIL 366 (873)
Q Consensus 289 H~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~--~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvv 366 (873)
| .|.++|+|+++.-+-|++..++-+||+----...... ...........+-++|.|||+-.....+..+|||+||+.
T Consensus 193 h-s~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmc 271 (458)
T KOG1266|consen 193 H-SCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMC 271 (458)
T ss_pred h-ccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHH
Confidence 9 5699999999999999999999888753211111000 001111222346789999999887788889999999999
Q ss_pred HHHHHhCCC
Q 002857 367 LLEMFTGLR 375 (873)
Q Consensus 367 L~ELlTGk~ 375 (873)
.+||..+..
T Consensus 272 AlemailEi 280 (458)
T KOG1266|consen 272 ALEMAILEI 280 (458)
T ss_pred HHHHHHhee
Confidence 999988754
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.26 E-value=1.9e-11 Score=141.25 Aligned_cols=142 Identities=20% Similarity=0.230 Sum_probs=99.9
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcch----------------------------------------hHH
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDAS----------------------------------------KSF 204 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~----------------------------------------~~f 204 (873)
.+.||.|++|.||+|++. +|+.||||+.+....... -+|
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 368999999999999874 688999999753211000 024
Q ss_pred HHHHHHHHhhh----hccceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHH
Q 002857 205 TVECEVMRNII----HRKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAID 280 (873)
Q Consensus 205 ~~Ei~iL~~L~----HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~q 280 (873)
.+|+..+.++. |.+-+.+-.++. ......+|||||++|++|.+++.. ..... .+..++..
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~----~~~~~~vLvmE~i~G~~L~~~~~~---------~~~~~---~~~~ia~~ 264 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYW----DRTSERVLTMEWIDGIPLSDIAAL---------DEAGL---DRKALAEN 264 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEeh----hhcCCceEEEEeECCcccccHHHH---------HhcCC---CHHHHHHH
Confidence 45565555553 333344333332 123346899999999999987632 00111 34567777
Q ss_pred HHH-HHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccccc
Q 002857 281 VAS-ALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLE 326 (873)
Q Consensus 281 Ia~-gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~ 326 (873)
++. .+..+| ..+++|+|++|.||+++.++.++|+|||++..+.
T Consensus 265 ~~~~~l~ql~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 265 LARSFLNQVL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHHH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 777 468889 8899999999999999999999999999997654
No 437
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.22 E-value=7.4e-11 Score=117.53 Aligned_cols=127 Identities=17% Similarity=0.134 Sum_probs=95.8
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhcccee-eeeeeecccccCCceEEEEEee
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIK-VVTACSRVDYQGNDFKALVYEF 243 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~-llg~c~~~~~~~~~~~~LV~Ey 243 (873)
.+.|+.|.++.||+++. .+..|++|+...... ....+..|+++++.+.+.+++. ++.+. ....++||||
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~-------~~~~~lv~e~ 72 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD-------PETGVLITEF 72 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe-------CCCCeEEEEe
Confidence 36789999999999986 467899999754322 2345788999999997766554 44431 1234799999
Q ss_pred cCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCC-----eeeccCCCCCeeeCCCCCeEEec
Q 002857 244 MPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPP-----IAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 244 ~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~g-----IvHrDLKpsNILLd~~~~vKLsD 318 (873)
+++.++.+.. .....++.+++++|+.|| ..+ ++|+|++|.||+++ ++.++++|
T Consensus 73 i~G~~l~~~~------------------~~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liD 130 (170)
T cd05151 73 IEGSELLTED------------------FSDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLID 130 (170)
T ss_pred cCCCcccccc------------------ccCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEe
Confidence 9998776421 012346789999999999 565 59999999999999 66899999
Q ss_pred ccccc
Q 002857 319 FGIAR 323 (873)
Q Consensus 319 FGla~ 323 (873)
||.+.
T Consensus 131 f~~a~ 135 (170)
T cd05151 131 WEYAG 135 (170)
T ss_pred ccccc
Confidence 99886
No 438
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.14 E-value=4.7e-11 Score=137.45 Aligned_cols=200 Identities=26% Similarity=0.280 Sum_probs=153.4
Q ss_pred CCCcceeecc--cCceEEEEEEE--cCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccC
Q 002857 161 GFSSENLIGA--GNFASVYKGIL--FEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 161 ~f~~~~~LG~--G~fG~VYkg~~--~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~ 233 (873)
.|.+...+|. |.+|.||.+.. ..++..+|+|.-+.-. ......-.+|+....++ .|+|.++.... +.+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~-----~e~ 189 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA-----WEG 189 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc-----ccc
Confidence 4566788999 99999999988 7788899999843222 22333445566666666 49999995554 466
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHH----HHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVAS----ALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~----gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
.+..++-+|++ +.+|.++.+. ....++....+.++.+... ||.++| ...|+|-|+||.||++.
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~---------~~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~ 256 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHT---------PCNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTT 256 (524)
T ss_pred CCcceeeeccc-cchhHHhhhc---------ccccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecc
Confidence 77788888887 5688888753 3344677778888888888 999999 99999999999999999
Q ss_pred CC-CCeEEecccccccccccccccc---ccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 310 DE-MTACVADFGIARFLEATNEQTS---SIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 310 ~~-~~vKLsDFGla~~~~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
.+ ...+++|||+...+....-... .....|...|++||...+ .++..+|||++|.++++..++......
T Consensus 257 ~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~ 329 (524)
T KOG0601|consen 257 SDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSV 329 (524)
T ss_pred cccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccC
Confidence 99 8999999999987765442211 122357788999998654 478889999999999999998776543
No 439
>PLN03150 hypothetical protein; Provisional
Probab=99.11 E-value=6.9e-11 Score=142.49 Aligned_cols=84 Identities=30% Similarity=0.407 Sum_probs=73.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.|+|.+|.+|+.|++|+.|+|++|+|+|.+|..++.|++|+.|+|++|+|+|.+|..+..+..+..+++++|.|.|
T Consensus 425 L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g 504 (623)
T PLN03150 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSG 504 (623)
T ss_pred CCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccc
Confidence 57888888899889999999999999999988899888899999999999999998888888888888888888888888
Q ss_pred CCCc
Q 002857 81 GIPE 84 (873)
Q Consensus 81 ~~p~ 84 (873)
.+|.
T Consensus 505 ~iP~ 508 (623)
T PLN03150 505 RVPA 508 (623)
T ss_pred cCCh
Confidence 7664
No 440
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.08 E-value=1.2e-09 Score=112.72 Aligned_cols=137 Identities=20% Similarity=0.177 Sum_probs=98.0
Q ss_pred ceeecccCceEEEEEEEcC------CCcEEEEEEeeccC----------------------CcchhHHH----HHHHHHH
Q 002857 165 ENLIGAGNFASVYKGILFE------GAPAVAIKVFNFLH----------------------HDASKSFT----VECEVMR 212 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~------~g~~VAVK~l~~~~----------------------~~~~~~f~----~Ei~iL~ 212 (873)
...||.|.-+.||.|.... .+..+|||+++... ....+.+. +|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999997543 24789999975210 01112233 7999999
Q ss_pred hhhh--ccceeeeeeeecccccCCceEEEEEeecCCCChhh-hcccccccccccCCCCCCchhhhHHHHHHHHHHHHHH-
Q 002857 213 NIIH--RKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEE-WIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYL- 288 (873)
Q Consensus 213 ~L~H--pNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~-~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yL- 288 (873)
++.. -++.+++++ ...+|||||+.+..+.. .|+ ...++..+...+..+++.+|..|
T Consensus 82 rl~~~Gv~vP~pi~~---------~~~~lvME~Ig~~~~~~~~Lk-----------d~~~~~~~~~~i~~~i~~~l~~l~ 141 (197)
T cd05146 82 RMQKAGIPCPEVVVL---------KKHVLVMSFIGDDQVPAPKLK-----------DAKLNDEEMKNAYYQVLSMMKQLY 141 (197)
T ss_pred HHHHcCCCCCeEEEe---------cCCEEEEEEcCCCCccchhhh-----------ccccCHHHHHHHHHHHHHHHHHHH
Confidence 9864 456666654 23589999997654422 121 12244455677889999999999
Q ss_pred hhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccc
Q 002857 289 HLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFL 325 (873)
Q Consensus 289 H~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~ 325 (873)
| ..+||||||++.|||++ ++.+.|+|||.+...
T Consensus 142 H---~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 142 K---ECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred H---hCCeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 7 78999999999999997 467999999988754
No 441
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.06 E-value=4.6e-10 Score=131.94 Aligned_cols=148 Identities=16% Similarity=0.148 Sum_probs=94.8
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc----------------------------------chh---
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD----------------------------------ASK--- 202 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~----------------------------------~~~--- 202 (873)
..|+. +.||.|++|.||+|+++.+|+.||||+.+..-.. ..+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 7899999999999999877999999998632100 001
Q ss_pred ---HHHHHHHHHHhhh----hccceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhH
Q 002857 203 ---SFTVECEVMRNII----HRKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERL 275 (873)
Q Consensus 203 ---~f~~Ei~iL~~L~----HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l 275 (873)
+|.+|+..+.+++ +.+.+.+-.++. .-....+|||||++|+.|.++-.- . .... .+.
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~----d~st~~VLvmE~i~G~~l~d~~~l--------~-~~g~---d~~ 262 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYW----DYCSETVMVMERMYGIPVSDVAAL--------R-AAGT---DMK 262 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeec----ccCCCceEEEeeecCccHHhHHHH--------H-hcCC---CHH
Confidence 2444554455543 333333333321 123457899999999999875310 0 0111 122
Q ss_pred HHHHHHHHH-HHHHhhCCCCCeeeccCCCCCeeeCCCC----CeEEecccccccccc
Q 002857 276 NIAIDVASA-LEYLHLGCKPPIAHCDIKPSNILLNDEM----TACVADFGIARFLEA 327 (873)
Q Consensus 276 ~Ia~qIa~g-L~yLH~~~s~gIvHrDLKpsNILLd~~~----~vKLsDFGla~~~~~ 327 (873)
.++...+.. +.-++ ..|++|+|++|.||+++.++ .+++.|||++..+..
T Consensus 263 ~la~~~v~~~~~Qif---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 263 LLAERGVEVFFTQVF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHHHHHHHHHHH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 233333322 22334 57999999999999999888 999999999987654
No 442
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.05 E-value=2.7e-09 Score=124.28 Aligned_cols=171 Identities=16% Similarity=0.173 Sum_probs=127.8
Q ss_pred EEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeecCCCChhhhccccc
Q 002857 178 KGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPIT 257 (873)
Q Consensus 178 kg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~ 257 (873)
.|..+.++.+|.|..++...........+-++.|+.++||||++++.. +...+..|||+|.+. -|..++..
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t-----~e~~~~~ylvTErV~--Pl~~~lk~-- 100 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDT-----TEEEGTLYLVTERVR--PLETVLKE-- 100 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhh-----hcccCceEEEeeccc--cHHHHHHH--
Confidence 466667888999998876555444567788899999999999999987 456678999999884 46666643
Q ss_pred ccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccccccccccccccc
Q 002857 258 EEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGV 337 (873)
Q Consensus 258 ~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~ 337 (873)
+.....-..+.||+.||.|||+ ..+++|++|.-..|+++..|..||++|.++........ .....
T Consensus 101 -----------l~~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~ 165 (690)
T KOG1243|consen 101 -----------LGKEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSL 165 (690)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccc
Confidence 2244566788999999999996 56899999999999999999999999998864432221 11111
Q ss_pred ccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCC
Q 002857 338 KGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGL 374 (873)
Q Consensus 338 ~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk 374 (873)
.--..|..|+.+.... -..|.|-||++++|++.|.
T Consensus 166 ~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 166 YLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred hhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence 2233466676543322 3469999999999999993
No 443
>PLN03150 hypothetical protein; Provisional
Probab=98.94 E-value=8.1e-10 Score=133.30 Aligned_cols=82 Identities=35% Similarity=0.454 Sum_probs=69.9
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccc-cCcccc-ccccccc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFK-NASATS-VFGNNKL 78 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~-~~l~~~-~l~nN~L 78 (873)
|++|+|+|.+|..++.|++|+.|+|++|+|+|.+|..+++|++|+.|+|++|+|+|.+|..+... ..+..+ +.+|..+
T Consensus 449 Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 449 LSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCccc
Confidence 68999999999999999999999999999999999999999999999999999999999886532 122233 3456678
Q ss_pred CCCC
Q 002857 79 CGGI 82 (873)
Q Consensus 79 ~G~~ 82 (873)
||.+
T Consensus 529 c~~p 532 (623)
T PLN03150 529 CGIP 532 (623)
T ss_pred cCCC
Confidence 8743
No 444
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.94 E-value=1e-08 Score=106.15 Aligned_cols=145 Identities=19% Similarity=0.222 Sum_probs=105.9
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhc--cceeeeeeeecccccCCceEEEEEe
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHR--KIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~Hp--NIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
+.|+.|..+.||++... +|+.+++|+...... .....+..|+++++.+.+. ++.+++.+..... ..+..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEE
Confidence 57899999999999873 357899999764322 1346789999999999763 4566777642211 1135689999
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhC-------------------------------
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLG------------------------------- 291 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~------------------------------- 291 (873)
|+++.++.+.+. ...++..++..++.+++++|.+||..
T Consensus 81 ~i~G~~l~~~~~-----------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (223)
T cd05154 81 RVDGRVLRDRLL-----------RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDAS 149 (223)
T ss_pred EeCCEecCCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhh
Confidence 999988887652 02355666777777777777777731
Q ss_pred ----------------------CCCCeeeccCCCCCeeeCC--CCCeEEeccccccc
Q 002857 292 ----------------------CKPPIAHCDIKPSNILLND--EMTACVADFGIARF 324 (873)
Q Consensus 292 ----------------------~s~gIvHrDLKpsNILLd~--~~~vKLsDFGla~~ 324 (873)
....++|+|+.+.||+++. ++.+.|+||+.+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 150 RTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred cccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1256799999999999998 66789999998864
No 445
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.91 E-value=2.8e-08 Score=110.09 Aligned_cols=283 Identities=16% Similarity=0.151 Sum_probs=169.6
Q ss_pred CcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeeccc--ccCCceEEE
Q 002857 163 SSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVD--YQGNDFKAL 239 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~--~~~~~~~~L 239 (873)
.....||+|+-+.+|-.-.. ...+-|++..-...... +.++.|... .||-+-.-+.+-...- -.......+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecchh---hchhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 34578999999999975321 22345776533322211 223333333 4554333121110000 012223667
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
+|..+.+. +=++.+...+.+...-...+|...+..++.+|.+.+-|| ..|.+-||+.++|+|+.++..+.|.|=
T Consensus 88 lmP~v~g~---~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVds 161 (637)
T COG4248 88 LMPKVSGK---EPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDS 161 (637)
T ss_pred ecccCCCc---cchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcc
Confidence 88887664 222222223444556678899999999999999999999 889999999999999999999999985
Q ss_pred ccccccccccccccccccccccccCCCcccC-----CCCCCcchhhHhHHHHHHHHHhC-CCCCCcccccchhhHHHHhh
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGM-----GHETSSYGDVYSFGILLLEMFTG-LRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSfGvvL~ELlTG-k~Pf~~~~~~~~~l~~~~~~ 393 (873)
..-.+. .........+|...|.+||.-. +..-+...|-|.+||++++|+.| ++||.+......
T Consensus 162 Dsfqi~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~-------- 230 (637)
T COG4248 162 DSFQIN---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISD-------- 230 (637)
T ss_pred cceeec---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCC--------
Confidence 433322 1222233346888999999643 44567789999999999999986 999987432110
Q ss_pred cCchhHH-HHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhcc--CcCCCCCHHHHHHHHHHHHH
Q 002857 394 ALPERVE-EIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAE--LPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 394 ~~~~~l~-elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~--dP~eRPTm~EVl~~Le~i~~ 470 (873)
-+...+ +|-...+....+.+. ..+..|...... . .+..+..+..+|+.. ++.-|||++.++..|..++.
T Consensus 231 -ap~p~E~~Ia~g~f~ya~~~~~---g~~p~P~~~P~~-~---Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 231 -APNPLETDIAHGRFAYASDQRR---GLKPPPRSIPLS-M---LPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred -CCCcchhhhhcceeeechhccC---CCCCCCCCCChh-h---cCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 011111 222222111111000 011111111111 1 122355677788865 36789999999999999999
Q ss_pred hhhcCC
Q 002857 471 KLLETP 476 (873)
Q Consensus 471 ~l~~~~ 476 (873)
.+.+..
T Consensus 303 ~L~~C~ 308 (637)
T COG4248 303 QLKKCT 308 (637)
T ss_pred hhhhhh
Confidence 887653
No 446
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.89 E-value=1.1e-09 Score=126.44 Aligned_cols=200 Identities=23% Similarity=0.197 Sum_probs=146.8
Q ss_pred HHHhhcCCCcceeecccCceEEEEEEEc-CCCcEEEEEEeeccCCcchhH--HHHHHHHHHhh-hhccceeeeeeeeccc
Q 002857 155 LYSATKGFSSENLIGAGNFASVYKGILF-EGAPAVAIKVFNFLHHDASKS--FTVECEVMRNI-IHRKIIKVVTACSRVD 230 (873)
Q Consensus 155 l~~at~~f~~~~~LG~G~fG~VYkg~~~-~~g~~VAVK~l~~~~~~~~~~--f~~Ei~iL~~L-~HpNIV~llg~c~~~~ 230 (873)
...-+.+|.....||.|.|+.|+..... .++..+++|.+.........+ -..|+.+...+ .|.++++....
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~----- 334 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSS----- 334 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCC-----
Confidence 3344567899999999999999998765 678889999876443332222 23455555555 58888876554
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND 310 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~ 310 (873)
+......++-.||++++++...+. ....+++..++.+..|++.++.++| ++.++|+|+||+||++..
T Consensus 335 W~~~r~~~ip~e~~~~~s~~l~~~----------~~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~ 401 (524)
T KOG0601|consen 335 WSQLRQGYIPLEFCEGGSSSLRSV----------TSQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISN 401 (524)
T ss_pred ccccccccCchhhhcCcchhhhhH----------HHHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeecc
Confidence 344556679999999998876651 2345777789999999999999999 999999999999999987
Q ss_pred C-CCeEEecccccccccccccccccccccccccc-CCCcccCCCCCCcchhhHhHHHHHHHHHhCCCC
Q 002857 311 E-MTACVADFGIARFLEATNEQTSSIGVKGTTGY-IAPEYGMGHETSSYGDVYSFGILLLEMFTGLRP 376 (873)
Q Consensus 311 ~-~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y-~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~P 376 (873)
+ +.-+++|||.+..+...... ....+..| .+++......+-.+.|+||||..+.|.+++..-
T Consensus 402 ~~~~~~~~~~~~~t~~~~~~~~----~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l 465 (524)
T KOG0601|consen 402 DGFFSKLGDFGCWTRLAFSSGV----FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL 465 (524)
T ss_pred chhhhhccccccccccceeccc----ccccccccccchhhccccccccccccccccccccccccCccc
Confidence 6 88999999998642211110 01122333 355556666788999999999999999998644
No 447
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.86 E-value=3.6e-08 Score=111.78 Aligned_cols=182 Identities=17% Similarity=0.168 Sum_probs=137.9
Q ss_pred CceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeecCC-CChh
Q 002857 172 NFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFMPN-GSLE 250 (873)
Q Consensus 172 ~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~-GSL~ 250 (873)
...+.|++....+|..+++|++.............-+++++++.|.|||++..++.... .++.-++|||+|.++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~t-F~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYT-FGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhc-cCcceEEEEEecCCCCchHH
Confidence 45688999998899999999995443333334455688999999999999999876333 345568999999986 5787
Q ss_pred hhcccccccc-----cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccc
Q 002857 251 EWIHPITEED-----KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFL 325 (873)
Q Consensus 251 ~~L~~~~~~~-----~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~ 325 (873)
++-....... .....+..+++..+|.++.|+..||.++| +.|+.-+-|.+++||++.+.+++|+..|+...+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeee
Confidence 7665322221 11234556788999999999999999999 889999999999999999999999999988766
Q ss_pred ccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCC
Q 002857 326 EATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRP 376 (873)
Q Consensus 326 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~P 376 (873)
..+.. |-+.. -.+-|.=.||.+++-|.||...
T Consensus 444 ~~d~~----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDPT----------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCCC----------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 44331 11111 2346888999999999999654
No 448
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.82 E-value=3.3e-08 Score=99.83 Aligned_cols=129 Identities=22% Similarity=0.306 Sum_probs=95.3
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccC--Cc------chhHHHHHHHHHHhhhhc--cceeeeeeeecccccCCc
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HD------ASKSFTVECEVMRNIIHR--KIIKVVTACSRVDYQGND 235 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~------~~~~f~~Ei~iL~~L~Hp--NIV~llg~c~~~~~~~~~ 235 (873)
..+++|+-+.+|.+.+. |..+++|.=.... .. ....-.+|+.+|.+++-- +...++.+ +..
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv-------D~~ 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV-------DPD 72 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE-------cCC
Confidence 46889999999999773 3346666422111 11 123567799999988643 33344443 344
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
...|+|||++|-.|.++|.. . +..++..|-.-+.-|| ..+|+|+||.++||++..+. +.
T Consensus 73 ~~~I~me~I~G~~lkd~l~~----------~-------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~ 131 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEE----------A-------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IY 131 (204)
T ss_pred CCEEEEEEeCChhHHHHHHh----------c-------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EE
Confidence 56899999999999988842 1 3668888888899999 99999999999999998765 99
Q ss_pred Eeccccccc
Q 002857 316 VADFGIARF 324 (873)
Q Consensus 316 LsDFGla~~ 324 (873)
++|||++.+
T Consensus 132 ~IDfGLg~~ 140 (204)
T COG3642 132 FIDFGLGEF 140 (204)
T ss_pred EEECCcccc
Confidence 999999974
No 449
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=98.81 E-value=4e-09 Score=133.76 Aligned_cols=84 Identities=37% Similarity=0.504 Sum_probs=80.1
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+++|.+|..|.+|++|+.|+|++|+++|.+|..+.+|++|++|+|++|.|+|.+|..+..+..+..+++++|.+.|
T Consensus 482 ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 561 (968)
T PLN00113 482 LSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSG 561 (968)
T ss_pred CcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccc
Confidence 68999999999999999999999999999999999999999999999999999999999998888999999999999998
Q ss_pred CCCc
Q 002857 81 GIPE 84 (873)
Q Consensus 81 ~~p~ 84 (873)
..|.
T Consensus 562 ~~p~ 565 (968)
T PLN00113 562 EIPK 565 (968)
T ss_pred cCCh
Confidence 7764
No 450
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.76 E-value=5.6e-08 Score=97.82 Aligned_cols=143 Identities=22% Similarity=0.249 Sum_probs=99.6
Q ss_pred cceeecccCceEEEEEEEcCCCcEEEEEE-eecc-------CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 164 SENLIGAGNFASVYKGILFEGAPAVAIKV-FNFL-------HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 164 ~~~~LG~G~fG~VYkg~~~~~g~~VAVK~-l~~~-------~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
...+|-+|+-+.|+++.+ .|+..+||. +.+. ..-..++..+|+++|.++.--.|.--.-++ .+..
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~-----~D~~ 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIF-----IDTY 83 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEE-----EecC
Confidence 568899999999999987 567767764 3211 111235678899999998643332222221 1223
Q ss_pred eEEEEEeecCC-CChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC--
Q 002857 236 FKALVYEFMPN-GSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM-- 312 (873)
Q Consensus 236 ~~~LV~Ey~~~-GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~-- 312 (873)
.-.|+|||+++ -++.+++... ............++..|-+.+.-|| ..+|+||||..+||+|..++
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~--------~~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~ 152 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILST--------MEDESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQ 152 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHH--------ccCcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCc
Confidence 34799999976 4788887531 1122222233788999999999999 89999999999999996544
Q ss_pred -CeEEeccccccc
Q 002857 313 -TACVADFGIARF 324 (873)
Q Consensus 313 -~vKLsDFGla~~ 324 (873)
.+.++|||++..
T Consensus 153 ~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 153 ITPILIDFGLSSV 165 (229)
T ss_pred CceEEEeecchhc
Confidence 568999999864
No 451
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.73 E-value=2.8e-09 Score=128.60 Aligned_cols=205 Identities=21% Similarity=0.324 Sum_probs=142.4
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
..++|.+.+-+-.|.++.++.+.-...+...++|+..... ....+....+-.++-..+||-++...-- +.-.
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-----~~~r 876 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-----FPCR 876 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-----CCCC
Confidence 4466777788889999999987665555555555543211 1111222222222222233444443322 2345
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
....||++|+.+++|...|+. ....+..-....+..+..+++||| ...++|+|++|.|+|...+++.
T Consensus 877 sP~~L~~~~~~~~~~~Skl~~----------~~~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~ 943 (1205)
T KOG0606|consen 877 SPLPLVGHYLNGGDLPSKLHN----------SGCLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHR 943 (1205)
T ss_pred CCcchhhHHhccCCchhhhhc----------CCCcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCc
Confidence 567899999999999999864 234555555667778889999999 7779999999999999999999
Q ss_pred EEeccccccccccc---------------------c--------ccccccccccccccCCCcccCCCCCCcchhhHhHHH
Q 002857 315 CVADFGIARFLEAT---------------------N--------EQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGI 365 (873)
Q Consensus 315 KLsDFGla~~~~~~---------------------~--------~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGv 365 (873)
+++|||........ . .........+|..|.+||...+......+|.|++|+
T Consensus 944 ~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~ 1023 (1205)
T KOG0606|consen 944 PLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGV 1023 (1205)
T ss_pred ccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhh
Confidence 99999843221100 0 001123456899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCcc
Q 002857 366 LLLEMFTGLRPSDDM 380 (873)
Q Consensus 366 vL~ELlTGk~Pf~~~ 380 (873)
+++|.++|..||+..
T Consensus 1024 ~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 1024 CLFEVLTGIPPFNAE 1038 (1205)
T ss_pred hhhhhhcCCCCCCCc
Confidence 999999999999874
No 452
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.69 E-value=2.1e-07 Score=101.02 Aligned_cols=146 Identities=14% Similarity=0.083 Sum_probs=100.2
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccCCc-----------chhHHHHHHHHHHhhhhccc--eeeeeeeeccccc
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD-----------ASKSFTVECEVMRNIIHRKI--IKVVTACSRVDYQ 232 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~-----------~~~~f~~Ei~iL~~L~HpNI--V~llg~c~~~~~~ 232 (873)
+.+-.-....|++..+ +|+.+.||........ ....+.+|...+.++...+| ..++++.......
T Consensus 28 e~v~~~~~rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 28 EVFRELEGRRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred cEEecCCCceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 4444444455777765 6678999977422211 11247899999999864443 3445553211111
Q ss_pred CCceEEEEEeecCCC-ChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC-
Q 002857 233 GNDFKALVYEFMPNG-SLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND- 310 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~G-SL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~- 310 (873)
.....+||||++++- +|.+++... .....+...+..++.+++..+.-|| ..||+|+|++++|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~--------~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~ 174 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADW--------ATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLP 174 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhh--------cccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEecc
Confidence 123578999999876 899887421 1123445667789999999999999 899999999999999975
Q ss_pred ------CCCeEEeccccccc
Q 002857 311 ------EMTACVADFGIARF 324 (873)
Q Consensus 311 ------~~~vKLsDFGla~~ 324 (873)
+..+.|+||+.++.
T Consensus 175 ~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 175 FPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred ccCCCCCceEEEEECCcccc
Confidence 46899999998863
No 453
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.68 E-value=1.2e-07 Score=97.58 Aligned_cols=125 Identities=22% Similarity=0.259 Sum_probs=82.0
Q ss_pred EEEEEEEcCCCcEEEEEEeeccC-------------Cc-------------chhHHHHHHHHHHhhhhc--cceeeeeee
Q 002857 175 SVYKGILFEGAPAVAIKVFNFLH-------------HD-------------ASKSFTVECEVMRNIIHR--KIIKVVTAC 226 (873)
Q Consensus 175 ~VYkg~~~~~g~~VAVK~l~~~~-------------~~-------------~~~~f~~Ei~iL~~L~Hp--NIV~llg~c 226 (873)
.||.|.. .++..+|||+.+... .. ......+|.+.|.++..- ++.+++.+-
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 4899976 567799999975210 00 012467799999999654 566666551
Q ss_pred ecccccCCceEEEEEeecC--CCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHH-HhhCCCCCeeeccCCC
Q 002857 227 SRVDYQGNDFKALVYEFMP--NGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEY-LHLGCKPPIAHCDIKP 303 (873)
Q Consensus 227 ~~~~~~~~~~~~LV~Ey~~--~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~y-LH~~~s~gIvHrDLKp 303 (873)
...|||||++ |..+..+.. ..++......++.+++..+.. +| ..+|+||||.+
T Consensus 80 ---------~~~ivME~I~~~G~~~~~l~~------------~~~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~ 135 (188)
T PF01163_consen 80 ---------RNVIVMEYIGEDGVPLPRLKD------------VDLSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSE 135 (188)
T ss_dssp ---------TTEEEEE--EETTEEGGCHHH------------CGGGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-ST
T ss_pred ---------CCEEEEEecCCCccchhhHHh------------ccccchhHHHHHHHHHHHHHHHHH---hcCceecCCCh
Confidence 2379999998 544544331 112244567788899886665 57 88999999999
Q ss_pred CCeeeCCCCCeEEecccccccc
Q 002857 304 SNILLNDEMTACVADFGIARFL 325 (873)
Q Consensus 304 sNILLd~~~~vKLsDFGla~~~ 325 (873)
.|||++++ .+.|+|||.+...
T Consensus 136 ~NIlv~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 136 YNILVDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp TSEEEETT-CEEE--GTTEEET
T ss_pred hhEEeecc-eEEEEecCcceec
Confidence 99999988 9999999988643
No 454
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.48 E-value=6.8e-07 Score=95.32 Aligned_cols=134 Identities=21% Similarity=0.210 Sum_probs=97.5
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC----------------------cchhHHHHHHHHHHhhhhc--
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH----------------------DASKSFTVECEVMRNIIHR-- 217 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~----------------------~~~~~f~~Ei~iL~~L~Hp-- 217 (873)
..+.+.||.|.-+.||.|.. ..|..+|||.-+.... -.....++|.++|.+|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~-~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAID-PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEEC-CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 34568999999999999977 4678999997531100 0113467799999998654
Q ss_pred cceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCee
Q 002857 218 KIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIA 297 (873)
Q Consensus 218 NIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIv 297 (873)
.|.+.+++ +...+||||++|--|...- ++....-.|+..|+.-+..+- ..|||
T Consensus 172 ~VP~P~~~---------nRHaVvMe~ieG~eL~~~r---------------~~~en~~~il~~il~~~~~~~---~~GiV 224 (304)
T COG0478 172 KVPKPIAW---------NRHAVVMEYIEGVELYRLR---------------LDVENPDEILDKILEEVRKAY---RRGIV 224 (304)
T ss_pred CCCCcccc---------ccceeeeehcccceeeccc---------------CcccCHHHHHHHHHHHHHHHH---HcCcc
Confidence 66666665 3568999999885554321 123344456666666666555 57899
Q ss_pred eccCCCCCeeeCCCCCeEEecccccc
Q 002857 298 HCDIKPSNILLNDEMTACVADFGIAR 323 (873)
Q Consensus 298 HrDLKpsNILLd~~~~vKLsDFGla~ 323 (873)
|+|+..-||+++++|.+.++||-.+.
T Consensus 225 HGDlSefNIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 225 HGDLSEFNILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred ccCCchheEEEecCCCEEEEeCcccc
Confidence 99999999999999999999997664
No 455
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=98.48 E-value=2.7e-08 Score=98.38 Aligned_cols=75 Identities=24% Similarity=0.327 Sum_probs=36.8
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCccccccccccc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKL 78 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L 78 (873)
||+|+|+ .+|+.|..|.+|+.|+|++|+++ .+|.++++|+.|+.|+++-|.|. .+|..++.+..+..+++..|+|
T Consensus 40 LSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl 114 (264)
T KOG0617|consen 40 LSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNL 114 (264)
T ss_pred cccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhcccccc
Confidence 3455555 45555555555555555555555 45555555555555555544444 3444444444444444444433
No 456
>PRK09902 hypothetical protein; Provisional
Probab=98.42 E-value=4.5e-06 Score=86.96 Aligned_cols=159 Identities=17% Similarity=0.136 Sum_probs=109.7
Q ss_pred HHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC------CcchhHHHHHHHHHHhhhhc--cceeee
Q 002857 152 YEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH------HDASKSFTVECEVMRNIIHR--KIIKVV 223 (873)
Q Consensus 152 ~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~------~~~~~~f~~Ei~iL~~L~Hp--NIV~ll 223 (873)
++.+......+-..---|+||.+.|++-.. +|..+-+|.-.... .-....|.+|+..|.++... .+.+.+
T Consensus 10 f~~~w~~~~~wve~pN~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv 87 (216)
T PRK09902 10 FNHWWATEGDWVEEPNYRRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV 87 (216)
T ss_pred HHHHHhCCCceecCCCcCCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc
Confidence 344444443443333457799999999765 34467788643111 22456899999999999643 344444
Q ss_pred eeeecccccCCceEEEEEeecCC-CChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCC
Q 002857 224 TACSRVDYQGNDFKALVYEFMPN-GSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIK 302 (873)
Q Consensus 224 g~c~~~~~~~~~~~~LV~Ey~~~-GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLK 302 (873)
++........-..+||+|-+.+ -+|.+++.. ......+...+..++.+|+..++-|| ..++.|+|+.
T Consensus 88 -f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~--------~~~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly 155 (216)
T PRK09902 88 -FGEAVKIEGEWRALLVTEDMAGFISIADWYAQ--------HAVSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCY 155 (216)
T ss_pred -eeeeeccCCceEEEEEEEeCCCCccHHHHHhc--------CCcCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCC
Confidence 3322212223457899998864 488888743 12234577778899999999999999 8999999999
Q ss_pred CCCeeeCCCCC--eEEeccccccc
Q 002857 303 PSNILLNDEMT--ACVADFGIARF 324 (873)
Q Consensus 303 psNILLd~~~~--vKLsDFGla~~ 324 (873)
+.|||++.++. ++++||.-++.
T Consensus 156 ~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 156 VRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred HhheeecCCCCeeEEEEEhhccch
Confidence 99999986666 99999987763
No 457
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.34 E-value=3.6e-06 Score=87.84 Aligned_cols=110 Identities=22% Similarity=0.282 Sum_probs=84.0
Q ss_pred hHHHHHHHHHHhhhhc--cceeeeeeeecccccCCceEEEEEeecCCC-ChhhhcccccccccccCCCCCCchhhhHHHH
Q 002857 202 KSFTVECEVMRNIIHR--KIIKVVTACSRVDYQGNDFKALVYEFMPNG-SLEEWIHPITEEDKRHKAPGNLNSLERLNIA 278 (873)
Q Consensus 202 ~~f~~Ei~iL~~L~Hp--NIV~llg~c~~~~~~~~~~~~LV~Ey~~~G-SL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia 278 (873)
....+|...+.++... ...+.+++..... ......+||+|++++- +|.+++.. ...++......++
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~-~~~~~s~lite~l~~~~~L~~~~~~----------~~~~~~~~~~~ll 124 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRK-GGGYRSYLITEALPGAQDLRDLLQQ----------WEQLDPSQRRELL 124 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcC-CCceeEEEEEEeCCCcccHHHHHHh----------hcccchhhHHHHH
Confidence 4678899988888543 3455566543221 1123468999999874 79998842 1125666788999
Q ss_pred HHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC---CeEEecccccccc
Q 002857 279 IDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM---TACVADFGIARFL 325 (873)
Q Consensus 279 ~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~---~vKLsDFGla~~~ 325 (873)
.+++..++-|| ..+|+|+|+++.|||++.+. .+.|+||+.++..
T Consensus 125 ~~l~~~i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 125 RALARLIAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHHHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999999999 89999999999999999876 8999999988753
No 458
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=98.33 E-value=9.6e-08 Score=94.56 Aligned_cols=67 Identities=31% Similarity=0.290 Sum_probs=54.6
Q ss_pred CCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCCCC
Q 002857 14 LSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCGGI 82 (873)
Q Consensus 14 l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G~~ 82 (873)
+.++.+++.|-||+|.|+ .+|+.++.|.+|++|++++|+++ .+|.++..+..+..+.++-|+|.-.+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~~lp 95 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLNILP 95 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhhcCc
Confidence 566778888888888888 88888888888888888888888 67777778888888888888877544
No 459
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.23 E-value=4.1e-07 Score=106.74 Aligned_cols=98 Identities=24% Similarity=0.439 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccccccccc-------ccccccccccccCCCcccC
Q 002857 278 AIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQ-------TSSIGVKGTTGYIAPEYGM 350 (873)
Q Consensus 278 a~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~-------~~~~~~~Gt~~Y~APE~l~ 350 (873)
+.+++.||.|+|. +.++||++|.|++|.++..+..||+.|+++......... ....-..-...|.|||++.
T Consensus 105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 3445599999996 789999999999999999999999999988654432110 1111122467899999999
Q ss_pred CCCCCcchhhHhHHHHHHHHHh-CCCCC
Q 002857 351 GHETSSYGDVYSFGILLLEMFT-GLRPS 377 (873)
Q Consensus 351 ~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf 377 (873)
+...+.++|+||+|+++|.+.. |+.-+
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~ 210 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSII 210 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchh
Confidence 9889999999999999999994 55444
No 460
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.08 E-value=1.5e-06 Score=72.43 Aligned_cols=58 Identities=34% Similarity=0.426 Sum_probs=26.8
Q ss_pred CCCeEeCCCCcCCCccc-ccccCCCCcceecccCCCccCCCCcccccccCcccccccccc
Q 002857 19 GLKVLDLSQNNLSGEIP-EFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNK 77 (873)
Q Consensus 19 ~L~~L~Ls~N~LsG~iP-~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~ 77 (873)
+|+.|+|++|+|+ .|| ..|..+++|++|+|++|+|+...|..+..+..+..+++++|.
T Consensus 2 ~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 3444455555444 333 344444555555555555544444444444444444444443
No 461
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.04 E-value=5.8e-05 Score=80.08 Aligned_cols=154 Identities=18% Similarity=0.171 Sum_probs=102.4
Q ss_pred CccCHHHHHHhhcCCCcceeec---ccCceEEEEEEEcCCCcEEEEEEeeccCCcch-----------------------
Q 002857 148 PYVSYEALYSATKGFSSENLIG---AGNFASVYKGILFEGAPAVAIKVFNFLHHDAS----------------------- 201 (873)
Q Consensus 148 ~~~s~~el~~at~~f~~~~~LG---~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~----------------------- 201 (873)
-..+++.|....++..+..+.| .|.-+.||+|.. .++..||||+++.......
T Consensus 33 D~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv 111 (268)
T COG1718 33 DKRTLETLRRLLSRGVITELVGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLV 111 (268)
T ss_pred hhHHHHHHHHHhcCCceeeeEeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHH
Confidence 3456677777777777766555 567779999965 5678999999863221110
Q ss_pred -hHHHHHHHHHHhhh--hccceeeeeeeecccccCCceEEEEEeecCCCC-hhhhcccccccccccCCCCCCchhhhHHH
Q 002857 202 -KSFTVECEVMRNII--HRKIIKVVTACSRVDYQGNDFKALVYEFMPNGS-LEEWIHPITEEDKRHKAPGNLNSLERLNI 277 (873)
Q Consensus 202 -~~f~~Ei~iL~~L~--HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GS-L~~~L~~~~~~~~~~~~~~~Ls~~~~l~I 277 (873)
.....|..-|.++. +-.+.+-+++. .-.|||||+.... -.-.| ....+...+...+
T Consensus 112 ~~W~~kEf~NL~R~~eAGVrvP~Pi~~~---------~nVLvMEfIg~~g~pAP~L-----------kDv~~e~~e~~~~ 171 (268)
T COG1718 112 FAWARKEFRNLKRAYEAGVRVPEPIAFR---------NNVLVMEFIGDDGLPAPRL-----------KDVPLELEEAEGL 171 (268)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceeec---------CCeEEEEeccCCCCCCCCc-----------ccCCcCchhHHHH
Confidence 11344666666663 34444445441 2479999996531 11111 1122223356778
Q ss_pred HHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccc
Q 002857 278 AIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFL 325 (873)
Q Consensus 278 a~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~ 325 (873)
..++++.+.-|-. ..++||+||+.=|||+. ++.+.|+|||.|...
T Consensus 172 ~~~~v~~~~~l~~--~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 172 YEDVVEYMRRLYK--EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred HHHHHHHHHHHHH--hcCcccccchhhheEEE-CCeEEEEECcccccc
Confidence 8888999888872 48999999999999999 889999999998754
No 462
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.04 E-value=4.9e-05 Score=79.71 Aligned_cols=142 Identities=13% Similarity=0.131 Sum_probs=95.1
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhH---------HHHHHHHHHhhhhc---cceeeeee
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKS---------FTVECEVMRNIIHR---KIIKVVTA 225 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~---------f~~Ei~iL~~L~Hp---NIV~llg~ 225 (873)
...+|...+++-......|.+-.. ++..+++|..+.......+. ..+++..+.+++.. ....++..
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 456788888888888888877655 67889999887543332222 23344444455332 22232332
Q ss_pred eecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCC
Q 002857 226 CSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSN 305 (873)
Q Consensus 226 c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsN 305 (873)
.....+.-....+|||||++|..|.++.. ++. .++..|++++.-|| ..|++|+|..|.|
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------------i~e----~~~~ki~~~ikqlH---~~G~~HGD~hpgN 165 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED--------------IDE----DLAEKIVEAIKQLH---KHGFYHGDPHPGN 165 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh--------------cCH----HHHHHHHHHHHHHH---HcCCccCCCCcCc
Confidence 22222222344679999999988877541 111 35677888899999 8999999999999
Q ss_pred eeeCCCCCeEEecccccc
Q 002857 306 ILLNDEMTACVADFGIAR 323 (873)
Q Consensus 306 ILLd~~~~vKLsDFGla~ 323 (873)
+++++++ ++++||+..+
T Consensus 166 Flv~~~~-i~iID~~~k~ 182 (229)
T PF06176_consen 166 FLVSNNG-IRIIDTQGKR 182 (229)
T ss_pred EEEECCc-EEEEECcccc
Confidence 9999654 9999998765
No 463
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.02 E-value=2.2e-06 Score=71.41 Aligned_cols=54 Identities=35% Similarity=0.434 Sum_probs=47.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNF 54 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~L 54 (873)
|++|+|+..-+..|..+++|++|+|++|+|+..-|..|.+|++|+.|+|++|+|
T Consensus 8 l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 8 LSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp ETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 578999944446788999999999999999965557999999999999999986
No 464
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.96 E-value=8.5e-05 Score=77.11 Aligned_cols=151 Identities=19% Similarity=0.271 Sum_probs=86.1
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhcc--ceeeeeeeecccccCCceEEEEEe
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRK--IIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpN--IV~llg~c~~~~~~~~~~~~LV~E 242 (873)
.+.|+.|..+.||+..... ..+++|..... .....+..|+.+++.+.... +.+++.++.. .......+++|+
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~--~~~~~~~~~~~~ 75 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTS--DEFNGFPYLLME 75 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEE--TEETSEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeeccc--ccccccceEEEE
Confidence 3679999999999998743 58999997533 34567889999999996543 4566664322 122345799999
Q ss_pred ecCCCChhh----------------hcccccccccccCCCCCCchhh---------hHHH------------HHHHHH-H
Q 002857 243 FMPNGSLEE----------------WIHPITEEDKRHKAPGNLNSLE---------RLNI------------AIDVAS-A 284 (873)
Q Consensus 243 y~~~GSL~~----------------~L~~~~~~~~~~~~~~~Ls~~~---------~l~I------------a~qIa~-g 284 (873)
++++..+.. .+...... . .....+.+.. .... ...+.+ .
T Consensus 76 ~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (239)
T PF01636_consen 76 YIPGRPLDDELSPEQRPELLRQLGRALAQLHQV--P-PPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERL 152 (239)
T ss_dssp EESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHS--H-TTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred Eeccccccccccccccccccccchhhhhhcccc--c-ccccccccccccccccccccccccccccchhhhhhhHHHHHHH
Confidence 999988877 11100000 0 0001111000 0000 111222 2
Q ss_pred HHHHhh----CCCCCeeeccCCCCCeeeC-CCCCeEEeccccccc
Q 002857 285 LEYLHL----GCKPPIAHCDIKPSNILLN-DEMTACVADFGIARF 324 (873)
Q Consensus 285 L~yLH~----~~s~gIvHrDLKpsNILLd-~~~~vKLsDFGla~~ 324 (873)
+..++. .....++|+|+.+.|||++ +++.+.|+||+.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 153 LQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 333331 1257799999999999999 666668999988753
No 465
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.96 E-value=3e-05 Score=91.16 Aligned_cols=142 Identities=19% Similarity=0.234 Sum_probs=92.2
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccCC----------------------c----ch--------------hHHH
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH----------------------D----AS--------------KSFT 205 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~----------------------~----~~--------------~~f~ 205 (873)
+.|+.++-|.||+|++. +|+.||||+.+..-. . .. -++.
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 67999999999999985 589999998641110 0 00 0134
Q ss_pred HHHHHHHhhh----hccceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHH
Q 002857 206 VECEVMRNII----HRKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDV 281 (873)
Q Consensus 206 ~Ei~iL~~L~----HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qI 281 (873)
+|+.-+.+++ +..-+++=.++ ++-.....|+|||++|-.+.+...- ....++ +..|+..+
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~----we~t~~~VLtmE~i~Gi~i~d~~~l---------~~~g~d---~k~ia~~~ 273 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVY----WEYTTRRVLTMEWIDGIKISDIAAL---------KSAGID---RKELAELL 273 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceee----hhccCCcEEEEEeeCCEecccHHHH---------HhcCCC---HHHHHHHH
Confidence 4555555542 22222232332 2223457899999999988887521 112333 34455555
Q ss_pred HHHH-HHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccccc
Q 002857 282 ASAL-EYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEA 327 (873)
Q Consensus 282 a~gL-~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~ 327 (873)
+++. ..+- ..++.|.|..|.||+++.++.+-+.|||+...+..
T Consensus 274 ~~~f~~q~~---~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 274 VRAFLRQLL---RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHHHHHH---hcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 5542 2222 45899999999999999999999999999876654
No 466
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=97.90 E-value=0.00015 Score=76.89 Aligned_cols=146 Identities=15% Similarity=0.158 Sum_probs=82.5
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccc--eeeeeeeecccccCCceEEEEEee
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKI--IKVVTACSRVDYQGNDFKALVYEF 243 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNI--V~llg~c~~~~~~~~~~~~LV~Ey 243 (873)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..-.+ .+.+++. ...+...+|||+
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~-----~~~~~~glv~e~ 75 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLV-----EDGGRLGLIYEL 75 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEE-----ecCCeeeeeeee
Confidence 57899999999984 23457889876422 33567899999999975444 5556553 234456789999
Q ss_pred cCCCC-hhhhccccc----------cc--ccccCC-CCCCchhhhHH-HHH----------HHHHH-HHHHhh-CCCCCe
Q 002857 244 MPNGS-LEEWIHPIT----------EE--DKRHKA-PGNLNSLERLN-IAI----------DVASA-LEYLHL-GCKPPI 296 (873)
Q Consensus 244 ~~~GS-L~~~L~~~~----------~~--~~~~~~-~~~Ls~~~~l~-Ia~----------qIa~g-L~yLH~-~~s~gI 296 (873)
++|.+ +...+.... .. ...+.- ........... +.. .+... ..+|.. .....+
T Consensus 76 i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~ 155 (226)
T TIGR02172 76 IVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTC 155 (226)
T ss_pred cCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCce
Confidence 99863 222221000 00 000000 00001000000 000 01111 122221 114567
Q ss_pred eeccCCCCCeeeCCCCCeEEecccccc
Q 002857 297 AHCDIKPSNILLNDEMTACVADFGIAR 323 (873)
Q Consensus 297 vHrDLKpsNILLd~~~~vKLsDFGla~ 323 (873)
+|+|+.|.||++++++ +.|+||+.+.
T Consensus 156 ~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 156 LHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred EecCCCCCcEEEcCCC-cEEEechhcC
Confidence 8999999999999888 9999999875
No 467
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.89 E-value=9e-06 Score=63.58 Aligned_cols=37 Identities=38% Similarity=0.620 Sum_probs=33.6
Q ss_pred CCCCeEeCCCCcCCCcccccccCCCCcceecccCCCcc
Q 002857 18 RGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFE 55 (873)
Q Consensus 18 ~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Ls 55 (873)
++|++|+|++|+|+ .||..|++|++|+.|+|++|+|+
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 58999999999999 89999999999999999999999
No 468
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.84 E-value=4.8e-05 Score=78.39 Aligned_cols=105 Identities=22% Similarity=0.225 Sum_probs=83.2
Q ss_pred HHHHHHHHhhhh-ccceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHH
Q 002857 205 TVECEVMRNIIH-RKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVAS 283 (873)
Q Consensus 205 ~~Ei~iL~~L~H-pNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~ 283 (873)
..|.-+|+.+++ +++.+++|+|. .++|.||...+++...-.. ...-...+|..|.+||.++++
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG---------~~~v~E~~~~~~~~~~~~~-------l~~~~~~~w~~R~~iA~~lL~ 70 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG---------RFYVVEYVGAGSLYGIYRP-------LSQFLQSPWEQRAKIALQLLE 70 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC---------CEEEEEeecCccccccccc-------cccccccCHHHHHHHHHHHHH
Confidence 458888888876 69999999994 3789999987766532100 011234689999999999999
Q ss_pred HHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccc
Q 002857 284 ALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFL 325 (873)
Q Consensus 284 gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~ 325 (873)
.+.+|++.....+.-.|++++|+-+++++++|++|...+...
T Consensus 71 ~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 71 LLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred HHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 999999765566888999999999999999999999877644
No 469
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.80 E-value=4.3e-06 Score=97.35 Aligned_cols=185 Identities=18% Similarity=0.140 Sum_probs=132.5
Q ss_pred CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhcc-ceeeeeeeecccccCCceEEEE
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRK-IIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpN-IV~llg~c~~~~~~~~~~~~LV 240 (873)
+...+-+++|+++++||.+.......+ .+.+... ....-++++|.+++||| .+..++- ++.+...+++
T Consensus 244 s~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d-----~~~E~~~~i~ 312 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLED-----YDGEDYLWIP 312 (829)
T ss_pred hHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-----hhhHHHHHHHHHccCCCCccccccc-----CCcccccchh
Confidence 334466889999999998654333222 4444311 45566899999999999 5555554 3567788999
Q ss_pred EeecCCC-ChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 241 YEFMPNG-SLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 241 ~Ey~~~G-SL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
++++.++ +-..... .....+...+...+.+.-.++|+||| +..=+|+| ||+..+ ...|..||
T Consensus 313 ~~i~s~~rs~~~~~~---------~se~~~~~~~~~~~~r~et~~l~~l~---~~~~~~~d----~~l~s~-~~~~~~~~ 375 (829)
T KOG0576|consen 313 MRICSTGRSSALEMT---------VSEIALEQYQFAYPLRKETRPLAELH---SSYKVHRD----NILGSE-EEVKLLDF 375 (829)
T ss_pred hhhhcCCccccccCC---------hhhHhhhhhhhhhhhhhhcccccccc---cccccCcc----cccccc-cccccccc
Confidence 9999877 2222211 12233445566677788889999999 55568998 777765 68899999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCC
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPS 377 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf 377 (873)
+....+.... ......++..|+|||+.....+..+-|+|+.|+--.++.-|-.|-
T Consensus 376 ~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 376 AVPPQLTRTM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred cCCcccCccc---ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 9988765543 223345899999999999999999999999999877777777664
No 470
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=97.78 E-value=7.3e-06 Score=94.42 Aligned_cols=81 Identities=35% Similarity=0.321 Sum_probs=68.0
Q ss_pred CCCcccc-CcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCccc-ccccCcccccccccccC
Q 002857 2 HGNLFEG-PIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEG-IFKNASATSVFGNNKLC 79 (873)
Q Consensus 2 s~N~L~G-~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~-~~~~~l~~~~l~nN~L~ 79 (873)
..|+|.. -||++|..|.-|++||||+|+|+ +.|..+-.-+++-+||||+|++. .||..+ ..+.-+-++++++|+|.
T Consensus 86 R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe 163 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE 163 (1255)
T ss_pred hccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh
Confidence 4577763 39999999999999999999999 99999999999999999999999 677763 34555667788999888
Q ss_pred CCCCc
Q 002857 80 GGIPE 84 (873)
Q Consensus 80 G~~p~ 84 (873)
..||+
T Consensus 164 ~LPPQ 168 (1255)
T KOG0444|consen 164 MLPPQ 168 (1255)
T ss_pred hcCHH
Confidence 77664
No 471
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.77 E-value=0.00029 Score=74.91 Aligned_cols=75 Identities=16% Similarity=0.138 Sum_probs=50.7
Q ss_pred ecccCc-eEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-hccceeeeeeeecccccCCceEEEEEeecC
Q 002857 168 IGAGNF-ASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDFKALVYEFMP 245 (873)
Q Consensus 168 LG~G~f-G~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~ 245 (873)
|..|.. ..||+... .+..++||+..... ...+..|++++..+. +--+.+++++. ...+..++|||+++
T Consensus 6 ~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~-----~~~~~~~lv~e~i~ 75 (244)
T cd05150 6 VTEGQSGATVYRLDG--KNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYG-----SDDGRAWLLTSAVP 75 (244)
T ss_pred cCCCCCcCeEEEEcC--CCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEE-----ecCCccEEEEEeeC
Confidence 444555 78999864 34678889875332 346788999999884 33455666653 22345789999999
Q ss_pred CCChhhh
Q 002857 246 NGSLEEW 252 (873)
Q Consensus 246 ~GSL~~~ 252 (873)
|.+|...
T Consensus 76 G~~l~~~ 82 (244)
T cd05150 76 GVPAAAL 82 (244)
T ss_pred CccHhHh
Confidence 9877654
No 472
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.71 E-value=0.00048 Score=71.61 Aligned_cols=135 Identities=21% Similarity=0.285 Sum_probs=92.9
Q ss_pred CcceeecccCceEEEEEEEcCCCcEEEEEEeeccC----------------CcchhHHHHHHHHHHhhh------hccce
Q 002857 163 SSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH----------------HDASKSFTVECEVMRNII------HRKII 220 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~----------------~~~~~~f~~Ei~iL~~L~------HpNIV 220 (873)
+....||+|+.=.||.- +......||+..... ....++..+|+.-...+. +.+|.
T Consensus 4 ~~~~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~ 80 (199)
T PF10707_consen 4 SESDLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIP 80 (199)
T ss_pred CCCcccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccc
Confidence 34578999999999973 456678899987554 223467788888777776 88999
Q ss_pred eeeeeeecccccCCceEEEEEeecCCC------ChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCC
Q 002857 221 KVVTACSRVDYQGNDFKALVYEFMPNG------SLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKP 294 (873)
Q Consensus 221 ~llg~c~~~~~~~~~~~~LV~Ey~~~G------SL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~ 294 (873)
+++|+. +.+....+|+|.+.+. +|.+++.. ..++. ...+.+.+ -..||- ..
T Consensus 81 r~~G~v-----eT~~G~Glv~e~I~d~dG~~s~TL~~~l~~-----------~~~~~-~~~~~L~~---f~~~l~---~~ 137 (199)
T PF10707_consen 81 RFYGFV-----ETNLGLGLVVELIRDADGNISPTLEDYLKE-----------GGLTE-ELRQALDE---FKRYLL---DH 137 (199)
T ss_pred cEeEEE-----ecCCceEEEEEEEECCCCCcCccHHHHHHc-----------CCccH-HHHHHHHH---HHHHHH---Hc
Confidence 999994 4556678999987542 56777632 23444 33333333 345555 56
Q ss_pred CeeeccCCCCCeeeCCC--C--CeEEec-ccccc
Q 002857 295 PIAHCDIKPSNILLNDE--M--TACVAD-FGIAR 323 (873)
Q Consensus 295 gIvHrDLKpsNILLd~~--~--~vKLsD-FGla~ 323 (873)
.|+.+||+|+||++... + .+.|+| ||-..
T Consensus 138 ~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~ 171 (199)
T PF10707_consen 138 HIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKE 171 (199)
T ss_pred CCeecCCCcccEEEEecCCCceEEEEEeCCCCcc
Confidence 79999999999999632 2 577777 55544
No 473
>PLN02876 acyl-CoA dehydrogenase
Probab=97.61 E-value=0.00072 Score=84.84 Aligned_cols=83 Identities=13% Similarity=0.163 Sum_probs=57.0
Q ss_pred ceeecccCceEEEEEEEcCCC--cEEEEEEeeccC-CcchhHHHHHHHHHHhhh-hccc--eeeeeeeecccccCCceEE
Q 002857 165 ENLIGAGNFASVYKGILFEGA--PAVAIKVFNFLH-HDASKSFTVECEVMRNII-HRKI--IKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g--~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~-HpNI--V~llg~c~~~~~~~~~~~~ 238 (873)
...|+.|.+..+|+.....++ ..+++|+..... ......+.+|+++|+.+. |.+| .+++.+|.... ..+..+
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~--v~G~~f 120 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDAS--VIGTAF 120 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCC--cCCCce
Confidence 577899999999998764432 367777754322 122357889999999995 6654 77787764321 123568
Q ss_pred EEEeecCCCCh
Q 002857 239 LVYEFMPNGSL 249 (873)
Q Consensus 239 LV~Ey~~~GSL 249 (873)
+||||+++..+
T Consensus 121 lVME~v~G~~~ 131 (822)
T PLN02876 121 YIMEYLEGRIF 131 (822)
T ss_pred EEEEecCCccc
Confidence 99999988654
No 474
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.60 E-value=0.0003 Score=71.18 Aligned_cols=130 Identities=18% Similarity=0.209 Sum_probs=89.6
Q ss_pred CcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEe
Q 002857 163 SSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~E 242 (873)
...+.|++|.+|.||++.+ .+..+|+|+-+. ......+..|+++|..++-.++.+=+-++ +.-++.||
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~--ds~r~~l~kEakiLeil~g~~~~p~vy~y--------g~~~i~me 92 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRR--DSPRRNLEKEAKILEILAGEGVTPEVYFY--------GEDFIRME 92 (201)
T ss_pred hhhhhhhcccccEEEEeec--cCceEEEEEecC--CcchhhHHHHHHHHHHhhhcCCCceEEEe--------chhhhhhh
Confidence 4467899999999999988 455899998553 23346899999999999877766533332 12346699
Q ss_pred ecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCC-CCCeeeCCCCCeEEecccc
Q 002857 243 FMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIK-PSNILLNDEMTACVADFGI 321 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLK-psNILLd~~~~vKLsDFGl 321 (873)
|+.|-.|.++-.. .+ .+-+..+++.-.-|- ..||-|+.|. |..++|..+..+.|+||..
T Consensus 93 ~i~G~~L~~~~~~-------------~~----rk~l~~vlE~a~~LD---~~GI~H~El~~~~k~vlv~~~~~~iIDFd~ 152 (201)
T COG2112 93 YIDGRPLGKLEIG-------------GD----RKHLLRVLEKAYKLD---RLGIEHGELSRPWKNVLVNDRDVYIIDFDS 152 (201)
T ss_pred hhcCcchhhhhhc-------------cc----HHHHHHHHHHHHHHH---HhccchhhhcCCceeEEecCCcEEEEEccc
Confidence 9998888776421 01 223344555544455 6788888886 4445555555999999999
Q ss_pred ccc
Q 002857 322 ARF 324 (873)
Q Consensus 322 a~~ 324 (873)
|+.
T Consensus 153 At~ 155 (201)
T COG2112 153 ATF 155 (201)
T ss_pred hhh
Confidence 874
No 475
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.51 E-value=0.00092 Score=70.93 Aligned_cols=77 Identities=8% Similarity=0.150 Sum_probs=46.8
Q ss_pred eeecccCce-EEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhc---cceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFA-SVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHR---KIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG-~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~Hp---NIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.|+.|+.. .||+. + ..+++|+.+.. .....+..|+++|..+... .+.++++.... .......++||
T Consensus 3 ~~~~~gG~~n~vy~~----~-~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~--~~~~~~~~~l~ 73 (235)
T cd05155 3 EPVDSGGTDNATFRL----G-DDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEP--GEGYPWPWSVY 73 (235)
T ss_pred eeccCCCcccceEEc----C-CceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCC--ccCCCcceEEE
Confidence 467777766 58975 1 24777875532 2345789999999988532 33444443211 01112458899
Q ss_pred eecCCCChhh
Q 002857 242 EFMPNGSLEE 251 (873)
Q Consensus 242 Ey~~~GSL~~ 251 (873)
++++|.++.+
T Consensus 74 ~~i~G~~l~~ 83 (235)
T cd05155 74 RWLEGETATA 83 (235)
T ss_pred EeecCCCCCc
Confidence 9999977753
No 476
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=97.49 E-value=1.8e-05 Score=91.23 Aligned_cols=75 Identities=28% Similarity=0.329 Sum_probs=40.3
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCccccccccccc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKL 78 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L 78 (873)
||.|+|. .+|..+.+|.+|+.|+||+|+|+ ++-...+...+|+.||||.|+|+ .+|..+.-++.+..+++.||+|
T Consensus 229 lS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL 303 (1255)
T KOG0444|consen 229 LSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKL 303 (1255)
T ss_pred ccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcc
Confidence 3555555 55666666666665555555555 44444444455555555555555 4555544444445555555543
No 477
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=97.49 E-value=3.3e-05 Score=85.63 Aligned_cols=79 Identities=37% Similarity=0.397 Sum_probs=60.1
Q ss_pred CCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcc--------------------
Q 002857 2 HGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTE-------------------- 61 (873)
Q Consensus 2 s~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~-------------------- 61 (873)
++|.++ .+|..+..+++|..|+|++|.|. .+|.+++.+..|+.||||+|.|. .+|..
T Consensus 420 snn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~v 496 (565)
T KOG0472|consen 420 SNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSV 496 (565)
T ss_pred hcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhcccccccc
Confidence 444444 88899999999999999999998 89999999999999999999887 45543
Q ss_pred ----cccccCcccccccccccCCCCC
Q 002857 62 ----GIFKNASATSVFGNNKLCGGIP 83 (873)
Q Consensus 62 ----~~~~~~l~~~~l~nN~L~G~~p 83 (873)
+..+..+..++++||.+...||
T Consensus 497 d~~~l~nm~nL~tLDL~nNdlq~IPp 522 (565)
T KOG0472|consen 497 DPSGLKNMRNLTTLDLQNNDLQQIPP 522 (565)
T ss_pred ChHHhhhhhhcceeccCCCchhhCCh
Confidence 3334455666677777665544
No 478
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.46 E-value=0.00059 Score=80.35 Aligned_cols=162 Identities=19% Similarity=0.210 Sum_probs=99.6
Q ss_pred CCCccCHHHHHHhh------------cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcc-------------
Q 002857 146 DFPYVSYEALYSAT------------KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDA------------- 200 (873)
Q Consensus 146 ~~~~~s~~el~~at------------~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~------------- 200 (873)
..|.++++|+...- ..|+ .+.||.-+.|.||+|+.+. |+.||||+-+..-...
T Consensus 136 ~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~-~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~ 213 (538)
T KOG1235|consen 136 QAPPFPWEEAFKIFEEELGAPIEDIFSEFD-EEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAK 213 (538)
T ss_pred cCCCCCHHHHHHHHHHHhCCCHHHHHHhcC-cchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHH
Confidence 45667777765432 2232 3679999999999999865 8999999843111000
Q ss_pred ------------------------hhHHHHHHHHHHhh----hhccc---eeeeeeeecccccCCceEEEEEeecCCCCh
Q 002857 201 ------------------------SKSFTVECEVMRNI----IHRKI---IKVVTACSRVDYQGNDFKALVYEFMPNGSL 249 (873)
Q Consensus 201 ------------------------~~~f~~Ei~iL~~L----~HpNI---V~llg~c~~~~~~~~~~~~LV~Ey~~~GSL 249 (873)
.-+|.+|++-..++ .|-+. |.+-.++ +.-.....|+||||+|..+
T Consensus 214 ~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy----~~~st~RVLtME~~~G~~i 289 (538)
T KOG1235|consen 214 VLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVY----WDLSTKRVLTMEYVDGIKI 289 (538)
T ss_pred HHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeeh----hhcCcceEEEEEecCCccC
Confidence 01245555544443 35551 1122222 2233467999999999988
Q ss_pred hhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC----CCCeEEecccccccc
Q 002857 250 EEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND----EMTACVADFGIARFL 325 (873)
Q Consensus 250 ~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~----~~~vKLsDFGla~~~ 325 (873)
.+.-.- ....++.. .|+..+.++... +-...|++|.|-.|.||+++. ++.+.+-|||+...+
T Consensus 290 ~Dl~~i---------~~~gi~~~---~i~~~l~~~~~~--qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i 355 (538)
T KOG1235|consen 290 NDLDAI---------DKRGISPH---DILNKLVEAYLE--QIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI 355 (538)
T ss_pred CCHHHH---------HHcCCCHH---HHHHHHHHHHHH--HHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence 776421 12233333 455555444322 222468999999999999983 678999999998765
Q ss_pred cc
Q 002857 326 EA 327 (873)
Q Consensus 326 ~~ 327 (873)
..
T Consensus 356 s~ 357 (538)
T KOG1235|consen 356 SH 357 (538)
T ss_pred cH
Confidence 43
No 479
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.40 E-value=0.0023 Score=66.50 Aligned_cols=130 Identities=21% Similarity=0.355 Sum_probs=92.9
Q ss_pred cCCCcceeecccCc-eEEEEEEEcCCCcEEEEEEeec---cCC------------------cchhHHHHHHHHHHhhh--
Q 002857 160 KGFSSENLIGAGNF-ASVYKGILFEGAPAVAIKVFNF---LHH------------------DASKSFTVECEVMRNII-- 215 (873)
Q Consensus 160 ~~f~~~~~LG~G~f-G~VYkg~~~~~g~~VAVK~l~~---~~~------------------~~~~~f~~Ei~iL~~L~-- 215 (873)
.+++..+.||.|.. |.||++.. +|+.+|+|+++. ... .....|..|.+...+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 67888999999999 99999988 677999999431 000 11235889999999885
Q ss_pred -hccc--eeeeeeeeccc---c----------cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHH
Q 002857 216 -HRKI--IKVVTACSRVD---Y----------QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAI 279 (873)
Q Consensus 216 -HpNI--V~llg~c~~~~---~----------~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~ 279 (873)
+.++ |+.+||..-.. . .......||.||++... .....-+.
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------------------~~~~~~~~ 171 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------------------PLQIRDIP 171 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------------------ccchhHHH
Confidence 3455 89999863210 0 11223567777765422 11233456
Q ss_pred HHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccc
Q 002857 280 DVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIA 322 (873)
Q Consensus 280 qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla 322 (873)
+|.+-|..|| ..+|+-+|+++.|.. .-||+|||.+
T Consensus 172 ~~~~dl~~~~---k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 172 QMLRDLKILH---KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHHHHHHH---HCCeeeccCcccccc-----CCEEEecccC
Confidence 7778889999 999999999999987 5689999864
No 480
>PRK10593 hypothetical protein; Provisional
Probab=97.31 E-value=0.0033 Score=69.45 Aligned_cols=81 Identities=11% Similarity=0.012 Sum_probs=57.1
Q ss_pred CcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhh---ccceeeeeeeecccccCCceEEE
Q 002857 163 SSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIH---RKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~H---pNIV~llg~c~~~~~~~~~~~~L 239 (873)
...+.||.|..+.||+... .++ .+++|..+. ......+..|++.|+.|.- -.+.+++++|... ...+..+|
T Consensus 17 ~~~~~i~~G~~~~vy~~~~-~~~-~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~--~~~g~~~L 90 (297)
T PRK10593 17 SRVECISEQPYAALWALYD-SQG-NPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHE--QSPGPDVL 90 (297)
T ss_pred heeeecCCccceeEEEEEc-CCC-CEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccC--CcCCCeEE
Confidence 3457899999999999854 233 477777542 1133589999999999853 3677888876321 22355799
Q ss_pred EEeecCCCCh
Q 002857 240 VYEFMPNGSL 249 (873)
Q Consensus 240 V~Ey~~~GSL 249 (873)
|||+++++++
T Consensus 91 VmE~i~G~~~ 100 (297)
T PRK10593 91 LLERLRGVSV 100 (297)
T ss_pred EEeccCCEec
Confidence 9999998765
No 481
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.29 E-value=0.0034 Score=66.27 Aligned_cols=76 Identities=21% Similarity=0.247 Sum_probs=49.3
Q ss_pred ceeecccCceEEEEEEEcC-CCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccce-eeeeeeecccccCCceEEEEEe
Q 002857 165 ENLIGAGNFASVYKGILFE-GAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKII-KVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~-~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV-~llg~c~~~~~~~~~~~~LV~E 242 (873)
.+.|..|-...+|+..... ++..|++|+...... ..-...+|+.++..+...+++ ++++.. . ..+|||
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~-~~~d~~~E~~~~~~l~~~gl~P~v~~~~-----~----~~~l~e 72 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE-LIIDRERELRIHKLLSKHGLAPKLYATF-----Q----NGLIYE 72 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc-ceecHHHHHHHHHHHHhCCCCCeEEEEe-----C----CcEEEE
Confidence 3567888888999986532 256889998764322 223345799999998654443 343331 1 148999
Q ss_pred ecCCCChh
Q 002857 243 FMPNGSLE 250 (873)
Q Consensus 243 y~~~GSL~ 250 (873)
|++|.++.
T Consensus 73 ~i~G~~l~ 80 (235)
T cd05157 73 FIPGRTLE 80 (235)
T ss_pred eeCCCcCC
Confidence 99987663
No 482
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.28 E-value=0.0015 Score=70.12 Aligned_cols=144 Identities=8% Similarity=0.047 Sum_probs=79.1
Q ss_pred eecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccce-eeeeeeecccccCCceEEEEEeecC
Q 002857 167 LIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKII-KVVTACSRVDYQGNDFKALVYEFMP 245 (873)
Q Consensus 167 ~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV-~llg~c~~~~~~~~~~~~LV~Ey~~ 245 (873)
.+..|-...+|+.. .++..+++|+.........-...+|.++++.+....++ +++... . .++||||++
T Consensus 3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~-------~--~~~v~e~i~ 71 (256)
T TIGR02721 3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN-------E--HWLLVEWLE 71 (256)
T ss_pred cCCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe-------C--CEEEEEecc
Confidence 35567788999886 35667889986533222112468899999999654443 344331 1 268999999
Q ss_pred CCChhhh-------ccccc-----ccccccCCCCCCchhhh-HHHHH---------HHHHHHHHHhh-----CCCCCeee
Q 002857 246 NGSLEEW-------IHPIT-----EEDKRHKAPGNLNSLER-LNIAI---------DVASALEYLHL-----GCKPPIAH 298 (873)
Q Consensus 246 ~GSL~~~-------L~~~~-----~~~~~~~~~~~Ls~~~~-l~Ia~---------qIa~gL~yLH~-----~~s~gIvH 298 (873)
|..+... +.... -+... .....++...+ ..... .+...+..+-. .....++|
T Consensus 72 G~~~~~~~~~~~~~~~~la~~l~~lH~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H 150 (256)
T TIGR02721 72 GEVITLDQFVALDLLLELAALLHQLHSQP-RFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLH 150 (256)
T ss_pred CcccccccccCchhHHHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeec
Confidence 8766431 00000 00000 00111111111 11111 11111222211 11346899
Q ss_pred ccCCCCCeeeCCCCCeEEecccccc
Q 002857 299 CDIKPSNILLNDEMTACVADFGIAR 323 (873)
Q Consensus 299 rDLKpsNILLd~~~~vKLsDFGla~ 323 (873)
+|+.|.||++++++ +.|+||..+.
T Consensus 151 ~Dl~~~Nil~~~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 151 MDVHAYNLVVTPQG-LKLIDWEYAS 174 (256)
T ss_pred CCCCcCcEEEeCCC-CEEEeccccC
Confidence 99999999999877 7899998875
No 483
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.22 E-value=0.0022 Score=70.26 Aligned_cols=154 Identities=15% Similarity=0.112 Sum_probs=88.1
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhcc--ceeeeeeeeccc-ccCCceEEEEE
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRK--IIKVVTACSRVD-YQGNDFKALVY 241 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpN--IV~llg~c~~~~-~~~~~~~~LV~ 241 (873)
.+.|..|....+|+... ++..+++|+... .....+..|++++..+.+.. +.+++....... ...++..++|+
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~ 93 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALV 93 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEE
Confidence 46677888889999764 334688898764 23456778999999886543 444443211000 01234568999
Q ss_pred eecCCCChhhh----c----------ccccccccc-cCCCCCCchhhhH----------HHHHHHHHHHHHHhh----CC
Q 002857 242 EFMPNGSLEEW----I----------HPITEEDKR-HKAPGNLNSLERL----------NIAIDVASALEYLHL----GC 292 (873)
Q Consensus 242 Ey~~~GSL~~~----L----------~~~~~~~~~-~~~~~~Ls~~~~l----------~Ia~qIa~gL~yLH~----~~ 292 (873)
+|++|..+... + |.....-.. ........|.... .....+..++.++.. ..
T Consensus 94 ~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 173 (296)
T cd05153 94 EFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDL 173 (296)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence 99998765430 1 100000000 0001111222111 111223344444442 22
Q ss_pred CCCeeeccCCCCCeeeCCCCCeEEecccccc
Q 002857 293 KPPIAHCDIKPSNILLNDEMTACVADFGIAR 323 (873)
Q Consensus 293 s~gIvHrDLKpsNILLd~~~~vKLsDFGla~ 323 (873)
..+++|+|+.|.|||++++..+.|+||+.+.
T Consensus 174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 174 PRGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 4679999999999999998778899998875
No 484
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.17 E-value=0.0058 Score=70.16 Aligned_cols=77 Identities=19% Similarity=0.171 Sum_probs=54.1
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeecc-------CCcchhHHHHHHHHHHhhh---hccceeeeeeeecccccCC
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFL-------HHDASKSFTVECEVMRNII---HRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~-------~~~~~~~f~~Ei~iL~~L~---HpNIV~llg~c~~~~~~~~ 234 (873)
.+.||.|.+..||++....+++.|+||.-... ..-..+.+..|.+.|..+. ..++.+++.+ +.
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~-------D~ 103 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY-------DE 103 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE-------CC
Confidence 36799999999999988544468999984311 1223466788899888873 2456777776 23
Q ss_pred ceEEEEEeecCCCC
Q 002857 235 DFKALVYEFMPNGS 248 (873)
Q Consensus 235 ~~~~LV~Ey~~~GS 248 (873)
+..++||||+++..
T Consensus 104 ~~~~lVME~L~~~~ 117 (401)
T PRK09550 104 ELAVTVMEDLSDHK 117 (401)
T ss_pred CCCEEEEecCCCcc
Confidence 44689999998743
No 485
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=97.15 E-value=0.00019 Score=73.04 Aligned_cols=75 Identities=32% Similarity=0.407 Sum_probs=27.6
Q ss_pred CCCCccccCcCcCCC-CCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCccc-ccccCccccccccccc
Q 002857 1 MHGNLFEGPIGLSLS-PLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEG-IFKNASATSVFGNNKL 78 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~-~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~-~~~~~l~~~~l~nN~L 78 (873)
|.+|.++ .| ..++ .|++|+.||||+|.|+ .|+ .|..|+.|+.|+|++|.|+. +...+ .....+..+++++|.+
T Consensus 26 L~~n~I~-~I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~L~~N~I 100 (175)
T PF14580_consen 26 LRGNQIS-TI-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELYLSNNKI 100 (175)
T ss_dssp ------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--EEE-TTS--
T ss_pred ccccccc-cc-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEECcCCcC
Confidence 4677777 34 3576 5889999999999999 675 58889999999999999994 44333 2456788899999988
Q ss_pred CC
Q 002857 79 CG 80 (873)
Q Consensus 79 ~G 80 (873)
..
T Consensus 101 ~~ 102 (175)
T PF14580_consen 101 SD 102 (175)
T ss_dssp -S
T ss_pred CC
Confidence 64
No 486
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=97.15 E-value=8.7e-05 Score=82.38 Aligned_cols=75 Identities=20% Similarity=0.227 Sum_probs=53.1
Q ss_pred CcCcCCCCCCCCCeEeCCCCcCCCc----------------------cccccc-CCCCcceecccCCCccCCCCcccccc
Q 002857 9 PIGLSLSPLRGLKVLDLSQNNLSGE----------------------IPEFLA-GFKFLQNLNLSHNNFESMIPTEGIFK 65 (873)
Q Consensus 9 ~iP~~l~~L~~L~~L~Ls~N~LsG~----------------------iP~~l~-~L~~L~~L~LS~N~Lsg~iP~~~~~~ 65 (873)
+||+++|.|.+|.-|+|..|.|. . +|+++. +|++|.+|||..|+|+ .+|..+..+
T Consensus 197 tlP~~lg~l~~L~~LyL~~Nki~-~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clL 274 (565)
T KOG0472|consen 197 TLPPELGGLESLELLYLRRNKIR-FLPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLL 274 (565)
T ss_pred cCChhhcchhhhHHHHhhhcccc-cCCCCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHh
Confidence 56666666666666666666555 4 444333 6777888888888888 678877777
Q ss_pred cCcccccccccccCCCCCcc
Q 002857 66 NASATSVFGNNKLCGGIPEF 85 (873)
Q Consensus 66 ~~l~~~~l~nN~L~G~~p~~ 85 (873)
..+..++++||.+++.+++.
T Consensus 275 rsL~rLDlSNN~is~Lp~sL 294 (565)
T KOG0472|consen 275 RSLERLDLSNNDISSLPYSL 294 (565)
T ss_pred hhhhhhcccCCccccCCccc
Confidence 88888888888888766543
No 487
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=97.10 E-value=0.00034 Score=71.23 Aligned_cols=76 Identities=29% Similarity=0.320 Sum_probs=34.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccc-cCCCCcceecccCCCccCCCC-cccccccCccccccccccc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFL-AGFKFLQNLNLSHNNFESMIP-TEGIFKNASATSVFGNNKL 78 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l-~~L~~L~~L~LS~N~Lsg~iP-~~~~~~~~l~~~~l~nN~L 78 (873)
|++|.|+ .|+ .|..|++|+.|+|++|+|+ .|.+.+ ..+++|+.|+|++|+|...-- ..+...+.+..+.+.+|.+
T Consensus 49 Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv 125 (175)
T PF14580_consen 49 LSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPV 125 (175)
T ss_dssp -TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GG
T ss_pred CCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcc
Confidence 6889999 565 4888999999999999999 777655 469999999999999984211 1233456677788888877
Q ss_pred C
Q 002857 79 C 79 (873)
Q Consensus 79 ~ 79 (873)
|
T Consensus 126 ~ 126 (175)
T PF14580_consen 126 C 126 (175)
T ss_dssp G
T ss_pred c
Confidence 6
No 488
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=97.05 E-value=8.2e-05 Score=85.82 Aligned_cols=79 Identities=19% Similarity=0.075 Sum_probs=55.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|..|+++.---..+.+|++|+.|+||+|.+.-.-++++.-.++|+.|+||+|+|+...+.++..+..+..+.++.|.+.
T Consensus 276 L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~ 354 (873)
T KOG4194|consen 276 LETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID 354 (873)
T ss_pred cccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchH
Confidence 3456666444555677777777777777777666677777777777777777777666666666666777777777654
No 489
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.03 E-value=8e-05 Score=71.95 Aligned_cols=53 Identities=28% Similarity=0.422 Sum_probs=29.2
Q ss_pred CCCCccccCcCcCCCCC-CCCCeEeCCCCcCCCcccccccCCCCcceecccCCCcc
Q 002857 1 MHGNLFEGPIGLSLSPL-RGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFE 55 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L-~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Ls 55 (873)
|++|.|. .+|..|... +.++.|||++|.|+ .+|.+++.++.|+.||+++|.|.
T Consensus 60 ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~ 113 (177)
T KOG4579|consen 60 LSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN 113 (177)
T ss_pred cccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc
Confidence 3455555 455555433 35555555555555 55555555555555555555555
No 490
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=97.01 E-value=0.00017 Score=83.30 Aligned_cols=81 Identities=19% Similarity=0.152 Sum_probs=64.9
Q ss_pred CCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCCC
Q 002857 2 HGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCGG 81 (873)
Q Consensus 2 s~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G~ 81 (873)
..|.++.---..|..|.++++|+|+.|+++..--.++.+|++|+.||||+|.+...-+++|.+...+..+++++|.++-.
T Consensus 253 qrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l 332 (873)
T KOG4194|consen 253 QRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRL 332 (873)
T ss_pred hhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccC
Confidence 45666644455678888999999999999844456888899999999999999888888888888888899999888754
Q ss_pred C
Q 002857 82 I 82 (873)
Q Consensus 82 ~ 82 (873)
.
T Consensus 333 ~ 333 (873)
T KOG4194|consen 333 D 333 (873)
T ss_pred C
Confidence 4
No 491
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=96.95 E-value=0.00012 Score=84.34 Aligned_cols=53 Identities=26% Similarity=0.423 Sum_probs=38.1
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCcc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFE 55 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Ls 55 (873)
++||+|+ .+|.+++.+..|..||.|.|++. .+|+.++.|.+|+.|++..|++.
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~ 202 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE 202 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh
Confidence 4677777 78888887778888888888887 77777777766665555555555
No 492
>PRK05231 homoserine kinase; Provisional
Probab=96.93 E-value=0.013 Score=64.95 Aligned_cols=169 Identities=15% Similarity=0.106 Sum_probs=87.2
Q ss_pred cCHHHHHHhhcCCCc-----ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhcc--ceee
Q 002857 150 VSYEALYSATKGFSS-----ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRK--IIKV 222 (873)
Q Consensus 150 ~s~~el~~at~~f~~-----~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpN--IV~l 222 (873)
++.+++......|.+ .+.|+.|....+|+... .++ .+++|++. ....+.+..|+.++..|.... +.+.
T Consensus 7 ls~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t-~~g-~~vLK~~~---~~~~~~l~~~~~~l~~L~~~glpvP~~ 81 (319)
T PRK05231 7 VSDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTT-TQG-EYVLTLFE---RLTAEDLPFFLGLMQHLAARGVPVPAP 81 (319)
T ss_pred CCHHHHHHHHHhcCCchhhccchhccccccceEEEEe-CCC-cEEEEEec---cCChHHhHHHHHHHHHHHHCCCCCCcc
Confidence 344555444445543 34566777789999865 333 68889875 122345556777777775333 3333
Q ss_pred eeeeeccc-ccCCceEEEEEeecCCCChhh-----------hc---ccccccc-cccCCCCCCch-hhhHH---------
Q 002857 223 VTACSRVD-YQGNDFKALVYEFMPNGSLEE-----------WI---HPITEED-KRHKAPGNLNS-LERLN--------- 276 (873)
Q Consensus 223 lg~c~~~~-~~~~~~~~LV~Ey~~~GSL~~-----------~L---~~~~~~~-~~~~~~~~Ls~-~~~l~--------- 276 (873)
+....... ....+..+++++|++|..+.. .| |.....- ........+.| .....
T Consensus 82 i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (319)
T PRK05231 82 VARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADE 161 (319)
T ss_pred eeCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChh
Confidence 32110000 012345789999999875421 11 1100000 00000111212 11111
Q ss_pred ---HHHH-HHHHHHHHhh----CCCCCeeeccCCCCCeeeCCCCCeEEecccccc
Q 002857 277 ---IAID-VASALEYLHL----GCKPPIAHCDIKPSNILLNDEMTACVADFGIAR 323 (873)
Q Consensus 277 ---Ia~q-Ia~gL~yLH~----~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~ 323 (873)
.+.+ +...+..+.. ....+++|+|+.+.|||++.+...-|+||+.+.
T Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 162 QAALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred HHHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 1111 1112233321 135689999999999999977666899999875
No 493
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.81 E-value=0.021 Score=63.17 Aligned_cols=154 Identities=16% Similarity=0.120 Sum_probs=85.2
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhcc--ceeeeeeeeccc-ccCCceEEEEE
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRK--IIKVVTACSRVD-YQGNDFKALVY 241 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpN--IV~llg~c~~~~-~~~~~~~~LV~ 241 (873)
.+.++.|....+|+... .++ .+++|+..... .......|++++..|.... +.+++....... ....+..++|+
T Consensus 27 i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~ 102 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV 102 (307)
T ss_pred ccccCCccccceEEEEe-CCC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence 45677777789999764 334 57788865321 2345667888888885333 344444211000 11235578999
Q ss_pred eecCCCChhhh--------------cccccccccccCCC---CCCchhhhH------------HHHHHHHHHHHHHhh--
Q 002857 242 EFMPNGSLEEW--------------IHPITEEDKRHKAP---GNLNSLERL------------NIAIDVASALEYLHL-- 290 (873)
Q Consensus 242 Ey~~~GSL~~~--------------L~~~~~~~~~~~~~---~~Ls~~~~l------------~Ia~qIa~gL~yLH~-- 290 (873)
+|++|..+... +|.... ....... ..-.|.... .....+...+++|..
T Consensus 103 e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~-~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~ 181 (307)
T TIGR00938 103 EFLQGLSVGRPTAMHCRPVGEVLAWMHLAGA-HFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFW 181 (307)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHhhhc-cCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhh
Confidence 99998654311 111000 0000000 001111100 111223344555542
Q ss_pred --CCCCCeeeccCCCCCeeeCCCCCeEEecccccc
Q 002857 291 --GCKPPIAHCDIKPSNILLNDEMTACVADFGIAR 323 (873)
Q Consensus 291 --~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~ 323 (873)
....+++|+|+.+.||+++.++...|+||+.+.
T Consensus 182 ~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 182 PRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred hhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 235789999999999999988777899999875
No 494
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=96.81 E-value=0.00075 Score=83.03 Aligned_cols=33 Identities=36% Similarity=0.467 Sum_probs=19.0
Q ss_pred CCCeEeCCCCcCCCcccccccCCCCcceecccCCCcc
Q 002857 19 GLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFE 55 (873)
Q Consensus 19 ~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Ls 55 (873)
+|+.|+|++|+|+ .+|..+ ++|+.|+||+|+|+
T Consensus 383 ~L~~LdLs~N~Lt-~LP~l~---s~L~~LdLS~N~Ls 415 (788)
T PRK15387 383 GLKELIVSGNRLT-SLPVLP---SELKELMVSGNRLT 415 (788)
T ss_pred ccceEEecCCccc-CCCCcc---cCCCEEEccCCcCC
Confidence 5666666666666 455432 34555566666555
No 495
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=96.78 E-value=0.00025 Score=85.88 Aligned_cols=80 Identities=28% Similarity=0.240 Sum_probs=66.8
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccc-cccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPE-FLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~-~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|.+|+|+...=+.|-+..+|++|+||+|+|. ++|+ .+.+|..|+.|+||+|.|+ .+|..+.....+..+...+|+|.
T Consensus 366 lanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~ 443 (1081)
T KOG0618|consen 366 LANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL 443 (1081)
T ss_pred HhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee
Confidence 4688998776666889999999999999998 8884 7888999999999999999 78888887788888888888777
Q ss_pred CCC
Q 002857 80 GGI 82 (873)
Q Consensus 80 G~~ 82 (873)
..|
T Consensus 444 ~fP 446 (1081)
T KOG0618|consen 444 SFP 446 (1081)
T ss_pred ech
Confidence 443
No 496
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=96.73 E-value=0.0027 Score=79.18 Aligned_cols=200 Identities=16% Similarity=0.173 Sum_probs=130.0
Q ss_pred HHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHH
Q 002857 204 FTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVAS 283 (873)
Q Consensus 204 f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~ 283 (873)
...|++.+.++.|+|++.++.|-.+.... +-...+..+++..-++...+. ....++....+.+..++..
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~-g~~~~v~~~~~s~~~~~~~~q----------~v~~i~~~~~r~~~~~~~~ 297 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFR-GIVLDVLQEICSKVELRSLLQ----------SVGSIPLETLRILHQKLLE 297 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcc-hHHHHHHHhhcCccchHHHHh----------hccccCHHHHHHHHHHHhh
Confidence 44567778889999999999884332111 112234456677777777763 3456777788889999999
Q ss_pred HHHHHhhCCCCCeeeccCCCC---CeeeCCCCCeEEe--ccccccccccccccccccccccccccCCCcccCCCCCCc--
Q 002857 284 ALEYLHLGCKPPIAHCDIKPS---NILLNDEMTACVA--DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSS-- 356 (873)
Q Consensus 284 gL~yLH~~~s~gIvHrDLKps---NILLd~~~~vKLs--DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~-- 356 (873)
||+|+| +....|.-|..+ +-..+.++...++ ||+..+.+...... ....-+..|.++|.........
T Consensus 298 GL~~~h---~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~---~~~~~~~~~~~~e~~~~~~~~~~r 371 (1351)
T KOG1035|consen 298 GLAYLH---SLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS---FSDLLAEIRNADEDLKENTAKKSR 371 (1351)
T ss_pred hHHHHH---HhccceeEEecccccccccCccceeecchhhhcccccCCCcccc---hhhcCccccccccccccccchhhh
Confidence 999999 555555555555 4455666777777 99988766443221 1223456678888776655444
Q ss_pred chhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHH
Q 002857 357 YGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILEC 436 (873)
Q Consensus 357 ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~ 436 (873)
..|+|.+|..+..+..|..+-... .....+++...
T Consensus 372 ~~dL~~lgll~~~~~~~~~i~~~~----------------~~~~~~l~~~~----------------------------- 406 (1351)
T KOG1035|consen 372 LTDLWCLGLLLLQLSQGEDISEKS----------------AVPVSLLDVLS----------------------------- 406 (1351)
T ss_pred hhHHHHHHHHHhhhhhcCcccccc----------------cchhhhhcccc-----------------------------
Confidence 379999999999999886542210 00011111000
Q ss_pred HHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 437 LNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 437 ~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
...+......|+..++++|+++.+++...
T Consensus 407 ~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 407 TSELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred chhhhhhhhhhcchhhhhccchhhhhhch
Confidence 00245567789999999999999987754
No 497
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=96.72 E-value=0.00025 Score=81.88 Aligned_cols=77 Identities=25% Similarity=0.249 Sum_probs=38.5
Q ss_pred CCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCCC
Q 002857 2 HGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCGG 81 (873)
Q Consensus 2 s~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G~ 81 (873)
+.|++. ++|.++..+..|+.|.|.+|.+. .||..+.+|..|++|||+.|+|+ .+|..+.+ --+..+.+.||+|...
T Consensus 83 srNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~-lpLkvli~sNNkl~~l 158 (722)
T KOG0532|consen 83 SRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCD-LPLKVLIVSNNKLTSL 158 (722)
T ss_pred cccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhc-CcceeEEEecCccccC
Confidence 445555 55555555555555555555555 55555555555555555555555 33333222 2233444555555443
Q ss_pred C
Q 002857 82 I 82 (873)
Q Consensus 82 ~ 82 (873)
+
T Consensus 159 p 159 (722)
T KOG0532|consen 159 P 159 (722)
T ss_pred C
Confidence 3
No 498
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.63 E-value=0.021 Score=62.73 Aligned_cols=76 Identities=22% Similarity=0.257 Sum_probs=50.3
Q ss_pred eeecccCceEEEEEEEcCC------CcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccce-eeeeeeecccccCCceEE
Q 002857 166 NLIGAGNFASVYKGILFEG------APAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKII-KVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~------g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV-~llg~c~~~~~~~~~~~~ 238 (873)
+.|..|-...+|+.....+ ++.+++|+..... .......+|++++..+....+. ++++++ . + .
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~-----~-~---~ 73 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIF-----P-N---G 73 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEe-----C-C---C
Confidence 4566777779999875331 5789999976433 2334678899999998644443 445442 1 1 3
Q ss_pred EEEeecCCCChhh
Q 002857 239 LVYEFMPNGSLEE 251 (873)
Q Consensus 239 LV~Ey~~~GSL~~ 251 (873)
+|+||++|..+..
T Consensus 74 ~v~e~i~G~~l~~ 86 (302)
T cd05156 74 RIEEFIPSRTLTT 86 (302)
T ss_pred chhheeCCCcCCH
Confidence 6899999877653
No 499
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=96.44 E-value=0.00086 Score=72.16 Aligned_cols=69 Identities=25% Similarity=0.175 Sum_probs=43.6
Q ss_pred cCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 8 GPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 8 G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|.+-..+-..+-|+.||||+|.++ .|-+++.-++.+++|+||+|.|.. +-. ++++..+..+++++|.|+
T Consensus 274 G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v~n-La~L~~L~~LDLS~N~Ls 342 (490)
T KOG1259|consen 274 GSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-VQN-LAELPQLQLLDLSGNLLA 342 (490)
T ss_pred CceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-ehh-hhhcccceEeecccchhH
Confidence 333333444566677777777777 677777777777777777777762 222 556666667777777665
No 500
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=96.43 E-value=0.00043 Score=67.02 Aligned_cols=78 Identities=22% Similarity=0.269 Sum_probs=66.5
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.|+ .+|.++..++.|+.|||++|.|. ..|.-+..|.+|-.|+.-+|.+. .||..+..........++|+.+.+
T Consensus 84 l~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~ 160 (177)
T KOG4579|consen 84 LANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGD 160 (177)
T ss_pred cchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccc
Confidence 5789999 79999999999999999999999 89999999999999999999998 778774444445566678887776
Q ss_pred C
Q 002857 81 G 81 (873)
Q Consensus 81 ~ 81 (873)
.
T Consensus 161 ~ 161 (177)
T KOG4579|consen 161 E 161 (177)
T ss_pred c
Confidence 4
Done!